RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HS3ST5 (Homo sapiens)

Ensembl gene IDs: ENSG00000249853

Ensembl transcript IDs: ENST00000312719.10, ENST00000312719.9, ENST00000441954.2

Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCACTGGGGTACAGAAATCCAGCAGGGAAGCACATCTTTCCAAGTaGTCTCATATGCACGTAAACAGCTTCCATTTTGGAAGCCAGCAG +
Preference number: 1 (lower is better)
Translates to: FTGVQKSSREAHLSK*SHMHVNSFHFGSQQ
Trigger: CTGCTGGCTTCCAAAATGGAAGCTGTTTACGTGCATATGAGAGCACTTGGAAAGATGTGCTTCCCTGCTGGATTTCTGTACCCCAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR CCA 90 bp GACTTGACTTTCCAATGTGTGATTGACATGCTACAAGTGACACCATaGTCCATACGAGAAAACAATAGTGCAAAATCACCACAAGAACTT +
Preference number: 1 (lower is better)
Translates to: DLTFQCVIDMLQVTP*SIRENNSAKSPQEL
Trigger: AAGTTCTTGTGGTGATTTTGCACTATTGTTTTCTCGTATGGACCATGGTGTCACTTGTAGCATGTCAATCACACATTGGAAAGTCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR TCA 90 bp AATATGAGCCATATGTTTATGTTAGTAATGGCAACACTAGGCAGCTaGATCCTTTCAGAGCAAATTGATATATTTTCAACTAACAGGGAG +
Preference number: 1 (lower is better)
Translates to: NMSHMFMLVMATLGS*ILSEQIDIFSTNRE
Trigger: CTCCCTGTTAGTTGAAAATATATCAATTTGCTCTGAAAGGATTCAGCTGCCTAGTGTTGCCATTACTAACATAAACATATGGCTCATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR TCA 90 bp TCCCTAGGCACTCTCACTGTGATGTTGAACAAAACTCTCTCAAACATCTCCCACTTGACATGCTACAAGTaGCACCATGGTCCATACGAG +
Preference number: 2 (lower is better)
Translates to: SLGTLTVMLNKTLSNISHLTCYK*HHGPYE
Trigger: CTCGTATGGACCATGGTGTCACTTGTAGCATGTCAA...GTGGGAGATGTTTGAGAGAGTTTTGTTCAACATCACAGTGAGAGTGCCTAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR CCA 90 bp TGCTCTCATATGCACGTAAACAGCTTCCATTTTGGAAGCCAGCAGGGGGCACGTCATGGAAAAATGACTTaGATAGCTCTGCCTAGGAAA +
Preference number: 2 (lower is better)
Translates to: CSHMHVNSFHFGSQQGARHGKMT*IALPRK
Trigger: TTTCCTAGGCAGAGCTATCCAAGTCATTTTTCCATG...ACGTGCCCCCTGCTGGCTTCCAAAATGGAAGCTGTTTACGTGCATATGAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR TCA 90 bp TCACTGGATCCTCTACTTCCTGAAGCTTCGCAGCCATTGGTACATTTTCACACACTCTTTGAGAATAGCTaGAGTCACTTTCCCCCAATA +
Preference number: 2 (lower is better)
Translates to: SLDPLLPEASQPLVHFHTLFENS*SHFPPI
Trigger: TATTGGGGGAAAGTGACTTCAGCTATTCTCAAAGAG...TGTGTGAAAATGTACCAATGGCTGCGAAGCTTCAGGAAGTAGAGGATCCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR TCA 90 bp TGTAATTTTCTGATTTCCCTAGGCACTCTCACTGTGATGTTGAACAAAACTCTCGGATCCTCTACTTCCTaGAGCTTCGCAGCCATTGGT +
Preference number: 2 (lower is better)
Translates to: CNFLISLGTLTVMLNKTLGSSTS*SFAAIG
Trigger: ACCAATGGCTGCGAAGCTTCAGGAAGTAGAGGATCC...GAGAGTTTTGTTCAACATCACAGTGAGAGTGCCTAGGGAAATCAGAAAATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR TCA 90 bp CTAGGCACTCTCACTGTGATGTTGAACAAAACTCTCTCAAACATCTCCCACTGGTTTCCAATGTGTGATTaGCATGCTACAAGTGACACC +
Preference number: 2 (lower is better)
Translates to: LGTLTVMLNKTLSNISHWFPMCD*HATSDT
Trigger: GGTGTCACTTGTAGCATGTCAATCACACATTGGAAA...CCAGTGGGAGATGTTTGAGAGAGTTTTGTTCAACATCACAGTGAGAGTGCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR CCA 90 bp TGGGGTACAGAAATCCAGCAGGGAAGCACATCTTTCCAAGTGCTCTCATATGCACTACAAGTGACACCATaGTCCATACGAGAAAACAAT +
Preference number: 2 (lower is better)
Translates to: WGTEIQQGSTSFQVLSYALQVTP*SIRENN
Trigger: ATTGTTTTCTCGTATGGACCATGGTGTCACTTGTAG...TGCATATGAGAGCACTTGGAAAGATGTGCTTCCCTGCTGGATTTCTGTACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR TCA 90 bp CTTTCCAAGTGCTCTCATATGCACGTAAACAGCTTCCATTTTGGAAGCCAGCAGTATGAAAATGGCGGGTaGCAAATTCTGAATCAAAGG +
Preference number: 2 (lower is better)
Translates to: LSKCSHMHVNSFHFGSQQYENGG*QILNQR
Trigger: CCTTTGATTCAGAATTTGTCACCCGCCATTTTCATA...CTGCTGGCTTCCAAAATGGAAGCTGTTTACGTGCATATGAGAGCACTTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR TCA 90 bp TCACTGGATCCTCTACTTCCTGAAGCTTCGCAGCCATTGGTACATTTTCACACATTTGGCTTAAATCTATaGAAATGGCGGGTGACAAAT +
Preference number: 2 (lower is better)
Translates to: SLDPLLPEASQPLVHFHTFGLNL*KWRVTN
Trigger: ATTTGTCACCCGCCATTTTCATAGATTTAAGCCAAA...TGTGTGAAAATGTACCAATGGCTGCGAAGCTTCAGGAAGTAGAGGATCCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR CAA 90 bp ATCCATTGTAATTTTCTGATTTCCCTAGGCACTCTCACTGTGATGTaGAACAAAACTCTCTCAAACATCTCCCACTGGATTAGCAACTGT +
Preference number: 2 (lower is better)
Translates to: IHCNFLISLGTLTVM*NKTLSNISHWISNC
Trigger: ACAGTTGCTAATCCAGTGGGAGATGTTTGAGAGAGTTTTGTTCAACATCACAGTGAGAGTGCCTAGGGAAATCAGAAAATTACAATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR TCA 90 bp CAGCAGCTTTCAGTACAGAGTTTTCTAATCTTATTTAATTTCTCTACTGGTCTGCACCAATTCAGCATCTaGATTAAAGAGCCAGCTTTC +
Preference number: 2 (lower is better)
Translates to: QQLSVQSFLILFNFSTGLHQFSI*IKEPAF
Trigger: GAAAGCTGGCTCTTTAATTCAGATGCTGAATTGGTG...CAGACCAGTAGAGAAATTAAATAAGATTAGAAAACTCTGTACTGAAAGCTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR CCA 90 bp TATGAGCCATATGTTTATGTTAGTAATGGCAACACTAGGCAGCTGAATCCTTTCAAGCTTCGCAGCCATTaGTACATTTTCACACATTTA +
Preference number: 2 (lower is better)
Translates to: YEPYVYVSNGNTRQLNPFKLRSH*YIFTHL
Trigger: TAAATGTGTGAAAATGTACCAATGGCTGCGAAGCTT...GAAAGGATTCAGCTGCCTAGTGTTGCCATTACTAACATAAACATATGGCTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR CAA 90 bp CTAGGCACTCTCACTGTGATGTTGAACAAAACTCTCTCAAACATCTCCCACTGGGAAGCTTCGCAGCCATaGGTACATTTTCACACATTT +
Preference number: 3 (lower is better)
Translates to: LGTLTVMLNKTLSNISHWEASQP*VHFHTF
Trigger: AAATGTGTGAAAATGTACCAATGGCTGCGAAGCTTC...CCAGTGGGAGATGTTTGAGAGAGTTTTGTTCAACATCACAGTGAGAGTGCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR TCA 72 bp ATGGAAGTAAAAGGACTTGACTTTCCAATGTGTGATTaGCATGCTACAAGTGACACCATGGTCCATACGAGA +
Preference number: 3 (lower is better)
Translates to: MEVKGLDFPMCD*HATSDTMVHTR
Trigger: TCTCGTATGGACCATGGTGTCACTTGTAGCATGTCAATCACACATTGGAAAGTCAAGTCCTTTTACTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR CAA 90 bp AGAAAAGTTCACCATCAAATCACTAGACAGGATAAACAACTCATGGAGAAAATCAATCTACAGGAGACATaGTGTGTCTCCAGGCACAAC +
Preference number: 3 (lower is better)
Translates to: RKVHHQITRQDKQLMEKINLQET*CVSRHN
Trigger: GTTGTGCCTGGAGACACACAATGTCTCCTGTAGATT...GATTTTCTCCATGAGTTGTTTATCCTGTCTAGTGATTTGATGGTGAACTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR CCA 72 bp TTCCAATGTGTGATTGACATGCTACAAGTGACACCATaGTCCATACGAGAAAACAATAGTGCAAAATCACCA +
Preference number: 3 (lower is better)
Translates to: FQCVIDMLQVTP*SIRENNSAKSP
Trigger: TGGTGATTTTGCACTATTGTTTTCTCGTATGGACCATGGTGTCACTTGTAGCATGTCAATCACACATTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR-3UTR CAA 90 bp TGTAATTTTCTGATTTCCCTAGGCACTCTCACTGTGATGTTGAACAAAACTCTCGAACTGATCTTATATTaGGTCACACACTGCGTATGT +
Preference number: 3 (lower is better)
Translates to: CNFLISLGTLTVMLNKTLELILY*VTHCVC
Trigger: ACATACGCAGTGTGTGACCAAATATAAGATCAGTTC...GAGAGTTTTGTTCAACATCACAGTGAGAGTGCCTAGGGAAATCAGAAAATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR CCA 72 bp TTCACCATCAAATCACTAGACAGGATAAACAACTCATaGAGAAAATCAACACTTATTACAATCAAAGGGGAA +
Preference number: 3 (lower is better)
Translates to: FTIKSLDRINNS*RKSTLITIKGE
Trigger: TTCCCCTTTGATTGTAATAAGTGTTGATTTTCTCCATGAGTTGTTTATCCTGTCTAGTGATTTGATGGTGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.9
3UTR CAA 72 bp AATTTTCTGATTTCCCTAGGCACTCTCACTGTGATGTaGAACAAAACTCTCTCAAACATCTCCCACTGGATT +
Preference number: 4 (lower is better)
Translates to: NFLISLGTLTVM*NKTLSNISHWI
Trigger: AATCCAGTGGGAGATGTTTGAGAGAGTTTTGTTCAACATCACAGTGAGAGTGCCTAGGGAAATCAGAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.9
CDS GCA 90 bp CGCGGGGGTCGGCGGCGGGTCGCGTGGGGGTCACCCGGCCGCTGCTaGGGTCCGGACGGCAGTTGGTCCAGTAGTTTCGGATGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: RGGRRRVAWGSPGRC*GPDGSWSSSFGCPG
Trigger: GCCCGGGCATCCGAAACTACTGGACCAACTGCCGTCCGGACCGCAGCAGCGGCCGGGTGACCCCCACGCGACCCGCCGCCGACCCCCGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 90 bp GGGCGCGGGGGTCGGCGGCGGGTCGCGTGGGGGTCACCCGGCCGCTaGTGCGGTCCGGACGGCAGTTGGTCCAGTAGTTTCGGATGCCCG +
Preference number: 5 (lower is better)
Translates to: GRGGRRRVAWGSPGR*CGPDGSWSSSFGCP
Trigger: CGGGCATCCGAAACTACTGGACCAACTGCCGTCCGGACCGCAGCAGCGGCCGGGTGACCCCCACGCGACCCGCCGCCGACCCCCGCGCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 90 bp CGCATCCTCCTTGCCCCACGAGGGCACCGGCGCAGCCCCGGACCCTaGGCGCAGAGGGCGAGACTTCGGGCGTCCTCGGTGACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: RILLAPRGHRRSPGP*AQRARLRASSVTAP
Trigger: AGGAGCTGTCACCGAGGACGCCCGAAGTCTCGCCCTCTGCGCGCAGGGTCCGGGGCTGCGCCGGTGCCCTCGTGGGGCAAGGAGGATGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 90 bp GCCCCGGACCCTGCGCGCAGAGGGCGAGACTTCGGGCGTCCTCGGTaGCAGCTCCTCGGGCAGCCCGCTCCCTCCCAATCCGCCCAAAAG +
Preference number: 5 (lower is better)
Translates to: APDPARRGRDFGRPR*QLLGQPAPSQSAQK
Trigger: CTTTTGGGCGGATTGGGAGGGAGCGGGCTGCCCGAGGAGCTGTCACCGAGGACGCCCGAAGTCTCGCCCTCTGCGCGCAGGGTCCGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 90 bp CCCGGCCCCCAGAGCGCCCGAGCCGGCAGCTGCCTCCCGGAGACGTaGCCAGCTGTGTGCGCGTGTGTGTGTCTAAGCGAATCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: PGPQSARAGSCLPET*PAVCACVCLSESLP
Trigger: GGGAAGAGATTCGCTTAGACACACACACGCGCACACAGCTGGGCACGTCTCCGGGAGGCAGCTGCCGGCTCGGGCGCTCTGGGGGCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 90 bp GGCGGAGAGCGAGTCGGCGTGAATGAGAGCAAACCAACAGGGCTGTaGGTGGCGCGTGTGAGTAAGACGCGAGCGGGCCCCACACGCAGG +
Preference number: 5 (lower is better)
Translates to: GGERVGVNESKPTGL*VARVSKTRAGPTRR
Trigger: CCTGCGTGTGGGGCCCGCTCGCGTCTTACTCACACGCGCCACGCACAGCCCTGTTGGTTTGCTCTCATTCACGCCGACTCGCTCTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 90 bp CCGCCCAAAAGAGCAACACTCAGTGTGACTGGGATCTTCCCTTCCTaGGTCCTCGAGCCTCCGGTGCCAAGCTGTGCGGGCGCCCCGCTC +
Preference number: 5 (lower is better)
Translates to: PPKRATLSVTGIFPS*VLEPPVPSCAGAPL
Trigger: GAGCGGGGCGCCCGCACAGCTTGGCACCGGAGGCTCGAGGACGCAGGAAGGGAAGATCCCAGTCACACTGAGTGTTGCTCTTTTGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 90 bp AGCGCCCGAGCCGGCAGCTGCCTCCCGGAGACGTGCCCAGCTGTGTaGGCGTGTGTGTGTCTAAGCGAATCTCTTCCCCTCCATCACTTG +
Preference number: 5 (lower is better)
Translates to: SARAGSCLPETCPAV*ACVCLSESLPLHHL
Trigger: CAAGTGATGGAGGGGAAGAGATTCGCTTAGACACACACACGCGCACACAGCTGGGCACGTCTCCGGGAGGCAGCTGCCGGCTCGGGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 90 bp GCAGCCCGCTCCCTCCCAATCCGCCCAAAAGAGCAACACTCAGTGTaGCTGGGATCTTCCCTTCCTGCGTCCTCGAGCCTCCGGTGCCAA +
Preference number: 5 (lower is better)
Translates to: AARSLPIRPKEQHSV*LGSSLPASSSLRCQ
Trigger: TTGGCACCGGAGGCTCGAGGACGCAGGAAGGGAAGATCCCAGTCACACTGAGTGTTGCTCTTTTGGGCGGATTGGGAGGGAGCGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CCA 90 bp CCCGCTCCCTCCCAATCCGCCCAAAAGAGCAACACTCAGTGTGACTaGGATCTTCCCTTCCTGCGTCCTCGAGCCTCCGGTGCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: PAPSQSAQKSNTQCD*DLPFLRPRASGAKL
Trigger: CAGCTTGGCACCGGAGGCTCGAGGACGCAGGAAGGGAAGATCCCAGTCACACTGAGTGTTGCTCTTTTGGGCGGATTGGGAGGGAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CCA 90 bp CCGGAACTCGTGCAGCAGGCCACGCTTAAACTGCAGGGCGCGAAGTaGGAATTCAGCCTGAGTGCGGGCTCCACCCAGTCGACCTTCAAT +
Preference number: 5 (lower is better)
Translates to: PELVQQATLKLQGAK*EFSLSAGSTQSTFN
Trigger: ATTGAAGGTCGACTGGGTGGAGCCCGCACTCAGGCTGAATTCCCACTTCGCGCCCTGCAGTTTAAGCGTGGCCTGCTGCACGAGTTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 90 bp AGCAGGCCACGCTTAAACTGCAGGGCGCGAAGTGGGAATTCAGCCTaGGTGCGGGCTCCACCCAGTCGACCTTCAATGGGGCAAATGGGT +
Preference number: 5 (lower is better)
Translates to: SRPRLNCRARSGNSA*VRAPPSRPSMGQMG
Trigger: ACCCATTTGCCCCATTGAAGGTCGACTGGGTGGAGCCCGCACTCAGGCTGAATTCCCACTTCGCGCCCTGCAGTTTAAGCGTGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 90 bp TGGAGGCGAACCTGCTCCTTGGAAGCGTTGCCCTTCCGGAACTCGTaGAGCAGGCCACGCTTAAACTGCAGGGCGCGAAGTGGGAATTCA +
Preference number: 5 (lower is better)
Translates to: WRRTCSLEALPFRNS*SRPRLNCRARSGNS
Trigger: TGAATTCCCACTTCGCGCCCTGCAGTTTAAGCGTGGCCTGCTGCACGAGTTCCGGAAGGGCAACGCTTCCAAGGAGCAGGTTCGCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CCA 90 bp GTGCCTCCTTTCCTCACCCCAATGATAATGGCCTTGGGGAGCTGCTaGACCAGGTCATGGAGGCGAACCTGCTCCTTGGAAGCGTTGCCC +
Preference number: 5 (lower is better)
Translates to: VPPFLTPMIMALGSC*TRSWRRTCSLEALP
Trigger: GGGCAACGCTTCCAAGGAGCAGGTTCGCCTCCATGACCTGGTCCAGCAGCTCCCCAAGGCCATTATCATTGGGGTGAGGAAAGGAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 90 bp AGCAGGATCTCAAACGCAGGCAGTCTAGCTCCAGAGTCCCTGCTCTaGGCCACTTCCCTGTGCTACCTGACTCCATCACAGCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SRISNAGSLAPESLL*ATSLCYLTPSQQLV
Trigger: CACCAGCTGCTGTGATGGAGTCAGGTAGCACAGGGAAGTGGCTCAGAGCAGGGACTCTGGAGCTAGACTGCCTGCGTTTGAGATCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441954.2
CDS GCA 90 bp ACGGCAAGGCTTCCCAGCACCAGGAGCTTCTGTCTCAGCCACGCCTaGTGTTTGAATAGCATGGCCCTCCATCAACCTTCAGGACTGCTG +
Preference number: 5 (lower is better)
Translates to: TARLPSTRSFCLSHA*CLNSMALHQPSGLL
Trigger: CAGCAGTCCTGAAGGTTGATGGAGGGCCATGCTATTCAAACAGCAGGCGTGGCTGAGACAGAAGCTCCTGGTGCTGGGAAGCCTTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 90 bp CTTGTGCCTCCTTTCCTCACCCCAATGATAATGGCCTTGGGGAGCTaGTGGACCAGGTCATGGAGGCGAACCTGCTCCTTGGAAGCGTTG +
Preference number: 5 (lower is better)
Translates to: LVPPFLTPMIMALGS*WTRSWRRTCSLEAL
Trigger: CAACGCTTCCAAGGAGCAGGTTCGCCTCCATGACCTGGTCCAGCAGCTCCCCAAGGCCATTATCATTGGGGTGAGGAAAGGAGGCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 90 bp GCCACTTCCCTGTGCTACCTGACTCCATCACAGCAGCTGGTGACATaGTGGTTTCCCCTCTTCTTGGGTTATTCAGACAGGTCCCTATTA +
Preference number: 5 (lower is better)
Translates to: ATSLCYLTPSQQLVT*WFPLFLGYSDRSLL
Trigger: TAATAGGGACCTGTCTGAATAACCCAAGAAGAGGGGAAACCAGCATGTCACCAGCTGCTGTGATGGAGTCAGGTAGCACAGGGAAGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441954.2
CDS TCA 90 bp GACTGCTGCAGCCTACATTCAGACAGGTCCCTATTATTCCAGCGATaGTTATCTTGTTGGCGGGTATTCCATGGCCTCTCCTCACCTACT +
Preference number: 5 (lower is better)
Translates to: DCCSLHSDRSLLFQR*LSCWRVFHGLSSPT
Trigger: AGTAGGTGAGGAGAGGCCATGGAATACCCGCCAACAAGATAATCATCGCTGGAATAATAGGGACCTGTCTGAATGTAGGCTGCAGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CCA 90 bp ACTTCCCTGTGCTACCTGACTCCATCACAGCAGCTGGTGACATGCTaGTTTCCCCTCTTCTTGGGTTATTCAGACAGGTCCCTATTATTC +
Preference number: 5 (lower is better)
Translates to: TSLCYLTPSQQLVTC*FPLFLGYSDRSLLF
Trigger: GAATAATAGGGACCTGTCTGAATAACCCAAGAAGAGGGGAAACCAGCATGTCACCAGCTGCTGTGATGGAGTCAGGTAGCACAGGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441954.2
CDS TCA 90 bp CCCCTCTTCTTGGGTTATTCAGACAGGTCCCTATTATTCCAGCGATaGTTATCTTGTTGGCGGGTATTCCATGGCCTCTCCTCACCTACT +
Preference number: 5 (lower is better)
Translates to: PLFLGYSDRSLLFQR*LSCWRVFHGLSSPT
Trigger: AGTAGGTGAGGAGAGGCCATGGAATACCCGCCAACAAGATAATCATCGCTGGAATAATAGGGACCTGTCTGAATAACCCAAGAAGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441954.2
CDS CCA 90 bp ATGAAAGAATTTGCGCAATTTAGTAATGACAGAGGGGTCCACCTCTaGATGAATGCGCCCCTTGCTGCCCGCCAGGCACTTATTAAAGAT +
Preference number: 5 (lower is better)
Translates to: MKEFAQFSNDRGVHL*MNAPLAARQALIKD
Trigger: ATCTTTAATAAGTGCCTGGCGGGCAGCAAGGGGCGCATTCATCCAGAGGTGGACCCCTCTGTCATTACTAAATTGCGCAAATTCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 90 bp AAGAATTTGCGCAATTTAGTAATGACAGAGGGGTCCACCTCTGGATaGATGCGCCCCTTGCTGCCCGCCAGGCACTTATTAAAGATAATA +
Preference number: 5 (lower is better)
Translates to: KNLRNLVMTEGSTSG*MRPLLPARHLLKII
Trigger: TATTATCTTTAATAAGTGCCTGGCGGGCAGCAAGGGGCGCATTCATCCAGAGGTGGACCCCTCTGTCATTACTAAATTGCGCAAATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 90 bp AGTTCTGGCAGAGGTTCCGTGATGAGGCGATCTCCATCGACGACATaGAATTGCTCAATTGGAAAGTATTTCAACCACCTTTCCAGATGT +
Preference number: 5 (lower is better)
Translates to: SSGRGSVMRRSPSTT*NCSIGKYFNHLSRC
Trigger: ACATCTGGAAAGGTGGTTGAAATACTTTCCAATTGAGCAATTTCATGTCGTCGATGGAGATCGCCTCATCACGGAACCTCTGCCAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 72 bp CTGGGATCTTCCCTTCCTGCGTCCTCGAGCCTCCGGTaGCAAGCTGTGCGGGCGCCCCGCTCCCCGCGGCTG +
Preference number: 6 (lower is better)
Translates to: LGSSLPASSSLR*QAVRAPRSPRL
Trigger: CAGCCGCGGGGAGCGGGGCGCCCGCACAGCTTGGCACCGGAGGCTCGAGGACGCAGGAAGGGAAGATCCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 72 bp CGGCGGCGGGTCGCGTGGGGGTCACCCGGCCGCTGCTaGGGTCCGGACGGCAGTTGGTCCAGTAGTTTCGGA +
Preference number: 6 (lower is better)
Translates to: RRRVAWGSPGRC*GPDGSWSSSFG
Trigger: TCCGAAACTACTGGACCAACTGCCGTCCGGACCGCAGCAGCGGCCGGGTGACCCCCACGCGACCCGCCGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 72 bp GGTCGGCGGCGGGTCGCGTGGGGGTCACCCGGCCGCTaGTGCGGTCCGGACGGCAGTTGGTCCAGTAGTTTC +
Preference number: 6 (lower is better)
Translates to: GRRRVAWGSPGR*CGPDGSWSSSF
Trigger: GAAACTACTGGACCAACTGCCGTCCGGACCGCAGCAGCGGCCGGGTGACCCCCACGCGACCCGCCGCCGACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 72 bp CCTGCGCGCAGAGGGCGAGACTTCGGGCGTCCTCGGTaGCAGCTCCTCGGGCAGCCCGCTCCCTCCCAATCC +
Preference number: 6 (lower is better)
Translates to: PARRGRDFGRPR*QLLGQPAPSQS
Trigger: GGATTGGGAGGGAGCGGGCTGCCCGAGGAGCTGTCACCGAGGACGCCCGAAGTCTCGCCCTCTGCGCGCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CCA 72 bp AGTTTAGGGCGCGTTTCCTGCACTTCCCCGAGAGGCTaGAACCAGGTGCGGCAGGGCGCGCTCCCGTGGCGC +
Preference number: 6 (lower is better)
Translates to: SLGRVSCTSPRG*NQVRQGALPWR
Trigger: GCGCCACGGGAGCGCGCCCTGCCGCACCTGGTTCCAGCCTCTCGGGGAAGTGCAGGAAACGCGCCCTAAACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 72 bp ATGAGAGCAAACCAACAGGGCTGTGCGTGGCGCGTGTaGGTAAGACGCGAGCGGGCCCCACACGCAGGCGGC +
Preference number: 6 (lower is better)
Translates to: MRANQQGCAWRV*VRRERAPHAGG
Trigger: GCCGCCTGCGTGTGGGGCCCGCTCGCGTCTTACTCACACGCGCCACGCACAGCCCTGTTGGTTTGCTCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 72 bp ATGCCCGGGCTAGGCTCGGCGGAGAGCGAGTCGGCGTaGATGAGAGCAAACCAACAGGGCTGTGCGTGGCGC +
Preference number: 6 (lower is better)
Translates to: MPGLGSAESESA*MRANQQGCAWR
Trigger: GCGCCACGCACAGCCCTGTTGGTTTGCTCTCATTCACGCCGACTCGCTCTCCGCCGAGCCTAGCCCGGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 72 bp GCCGGCAGCTGCCTCCCGGAGACGTGCCCAGCTGTGTaGGCGTGTGTGTGTCTAAGCGAATCTCTTCCCCTC +
Preference number: 6 (lower is better)
Translates to: AGSCLPETCPAV*ACVCLSESLPL
Trigger: GAGGGGAAGAGATTCGCTTAGACACACACACGCGCACACAGCTGGGCACGTCTCCGGGAGGCAGCTGCCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 72 bp CGAGTCGGCGTGAATGAGAGCAAACCAACAGGGCTGTaGGTGGCGCGTGTGAGTAAGACGCGAGCGGGCCCC +
Preference number: 6 (lower is better)
Translates to: RVGVNESKPTGL*VARVSKTRAGP
Trigger: GGGGCCCGCTCGCGTCTTACTCACACGCGCCACGCACAGCCCTGTTGGTTTGCTCTCATTCACGCCGACTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CCA 72 bp GTGCAGCAGGCCACGCTTAAACTGCAGGGCGCGAAGTaGGAATTCAGCCTGAGTGCGGGCTCCACCCAGTCG +
Preference number: 6 (lower is better)
Translates to: VQQATLKLQGAK*EFSLSAGSTQS
Trigger: CGACTGGGTGGAGCCCGCACTCAGGCTGAATTCCCACTTCGCGCCCTGCAGTTTAAGCGTGGCCTGCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CCA 72 bp GCTGCTGGACCAGGTCATGGAGGCGAACCTGCTCCTTaGAAGCGTTGCCCTTCCGGAACTCGTGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: AAGPGHGGEPAP*KRCPSGTRAAG
Trigger: GCCTGCTGCACGAGTTCCGGAAGGGCAACGCTTCCAAGGAGCAGGTTCGCCTCCATGACCTGGTCCAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CAA 90 bp GCCTTGGGGAGCTGCTGGACCAGGTCATGGAGGCGAACCTGCTCCTaGGAAGCGTTGCCCTTCCGGAACTCGTGCAGCAGGCCACGCTTA +
Preference number: 6 (lower is better)
Translates to: ALGSCWTRSWRRTCS*EALPFRNSCSRPRL
Trigger: TAAGCGTGGCCTGCTGCACGAGTTCCGGAAGGGCAACGCTTCCAAGGAGCAGGTTCGCCTCCATGACCTGGTCCAGCAGCTCCCCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 72 bp TTGGGGAGCTGCTGGACCAGGTCATGGAGGCGAACCTaGTCCTTGGAAGCGTTGCCCTTCCGGAACTCGTGC +
Preference number: 6 (lower is better)
Translates to: LGSCWTRSWRRT*SLEALPFRNSC
Trigger: GCACGAGTTCCGGAAGGGCAACGCTTCCAAGGAGCAGGTTCGCCTCCATGACCTGGTCCAGCAGCTCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CAA 72 bp AGCTGCTGGACCAGGTCATGGAGGCGAACCTGCTCCTaGGAAGCGTTGCCCTTCCGGAACTCGTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SCWTRSWRRTCS*EALPFRNSCSR
Trigger: CCTGCTGCACGAGTTCCGGAAGGGCAACGCTTCCAAGGAGCAGGTTCGCCTCCATGACCTGGTCCAGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CAA 90 bp AGCTGCTGGACCAGGTCATGGAGGCGAACCTGCTCCTTGGAAGCGTaGCCCTTCCGGAACTCGTGCAGCAGGCCACGCTTAAACTGCAGG +
Preference number: 6 (lower is better)
Translates to: SCWTRSWRRTCSLEA*PFRNSCSRPRLNCR
Trigger: CCTGCAGTTTAAGCGTGGCCTGCTGCACGAGTTCCGGAAGGGCAACGCTTCCAAGGAGCAGGTTCGCCTCCATGACCTGGTCCAGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 72 bp CGCTTAAACTGCAGGGCGCGAAGTGGGAATTCAGCCTaGGTGCGGGCTCCACCCAGTCGACCTTCAATGGGG +
Preference number: 6 (lower is better)
Translates to: RLNCRARSGNSA*VRAPPSRPSMG
Trigger: CCCCATTGAAGGTCGACTGGGTGGAGCCCGCACTCAGGCTGAATTCCCACTTCGCGCCCTGCAGTTTAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CAA 90 bp AGCAGGGCCCTTGTGCCTCCTTTCCTCACCCCAATGATAATGGCCTaGGGGAGCTGCTGGACCAGGTCATGGAGGCGAACCTGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SRALVPPFLTPMIMA*GSCWTRSWRRTCSL
Trigger: CAAGGAGCAGGTTCGCCTCCATGACCTGGTCCAGCAGCTCCCCAAGGCCATTATCATTGGGGTGAGGAAAGGAGGCACAAGGGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 72 bp TCCCTCCCAATCCGCCCAAAAGAGCAACACTCAGTGTaGCTGGGATCTTCCCTTCCTGCGTCCTCGAGCCTC +
Preference number: 6 (lower is better)
Translates to: SLPIRPKEQHSV*LGSSLPASSSL
Trigger: GAGGCTCGAGGACGCAGGAAGGGAAGATCCCAGTCACACTGAGTGTTGCTCTTTTGGGCGGATTGGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CAA 72 bp CTTGTGCCTCCTTTCCTCACCCCAATGATAATGGCCTaGGGGAGCTGCTGGACCAGGTCATGGAGGCGAACC +
Preference number: 6 (lower is better)
Translates to: LVPPFLTPMIMA*GSCWTRSWRRT
Trigger: GGTTCGCCTCCATGACCTGGTCCAGCAGCTCCCCAAGGCCATTATCATTGGGGTGAGGAAAGGAGGCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 72 bp GCACCAGGAGCTTCTGTCTCAGCCACGCCTGCTGTTTaGATAGCATGGCCCTCCATCAACCTTCAGGACTGC +
Preference number: 6 (lower is better)
Translates to: APGASVSATPAV*IAWPSINLQDC
Trigger: GCAGTCCTGAAGGTTGATGGAGGGCCATGCTATTCAAACAGCAGGCGTGGCTGAGACAGAAGCTCCTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CCA 72 bp TTCCTCACCCCAATGATAATGGCCTTGGGGAGCTGCTaGACCAGGTCATGGAGGCGAACCTGCTCCTTGGAA +
Preference number: 6 (lower is better)
Translates to: FLTPMIMALGSC*TRSWRRTCSLE
Trigger: TTCCAAGGAGCAGGTTCGCCTCCATGACCTGGTCCAGCAGCTCCCCAAGGCCATTATCATTGGGGTGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 72 bp CTTCCCAGCACCAGGAGCTTCTGTCTCAGCCACGCCTaGTGTTTGAATAGCATGGCCCTCCATCAACCTTCA +
Preference number: 6 (lower is better)
Translates to: LPSTRSFCLSHA*CLNSMALHQPS
Trigger: TGAAGGTTGATGGAGGGCCATGCTATTCAAACAGCAGGCGTGGCTGAGACAGAAGCTCCTGGTGCTGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CCA 72 bp GGCAAATGGGTTGTAGCCTATCCAAGCTCCCAACTCTaGCGACTAGATACAGGAGACTCCCAACGGCAAGGC +
Preference number: 6 (lower is better)
Translates to: GKWVVAYPSSQL*RLDTGDSQRQG
Trigger: GCCTTGCCGTTGGGAGTCTCCTGTATCTAGTCGCCAGAGTTGGGAGCTTGGATAGGCTACAACCCATTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CCA 72 bp TTTGCGCAATTTAGTAATGACAGAGGGGTCCACCTCTaGATGAATGCGCCCCTTGCTGCCCGCCAGGCACTT +
Preference number: 6 (lower is better)
Translates to: FAQFSNDRGVHL*MNAPLAARQAL
Trigger: AAGTGCCTGGCGGGCAGCAAGGGGCGCATTCATCCAGAGGTGGACCCCTCTGTCATTACTAAATTGCGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CAA 72 bp AGCACCAGGAGCTTCTGTCTCAGCCACGCCTGCTGTTaGAATAGCATGGCCCTCCATCAACCTTCAGGACTG +
Preference number: 6 (lower is better)
Translates to: STRSFCLSHACC*NSMALHQPSGL
Trigger: CAGTCCTGAAGGTTGATGGAGGGCCATGCTATTCAAACAGCAGGCGTGGCTGAGACAGAAGCTCCTGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 72 bp CGCAATTTAGTAATGACAGAGGGGTCCACCTCTGGATaGATGCGCCCCTTGCTGCCCGCCAGGCACTTATTA +
Preference number: 6 (lower is better)
Translates to: RNLVMTEGSTSG*MRPLLPARHLL
Trigger: TAATAAGTGCCTGGCGGGCAGCAAGGGGCGCATTCATCCAGAGGTGGACCCCTCTGTCATTACTAAATTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CCA 72 bp TGCTACCTGACTCCATCACAGCAGCTGGTGACATGCTaGTTTCCCCTCTTCTTGGGTTATTCAGACAGGTCC +
Preference number: 6 (lower is better)
Translates to: CYLTPSQQLVTC*FPLFLGYSDRS
Trigger: GGACCTGTCTGAATAACCCAAGAAGAGGGGAAACCAGCATGTCACCAGCTGCTGTGATGGAGTCAGGTAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441954.2
CDS CAA 90 bp CAGCCTACATTCAGACAGGTCCCTATTATTCCAGCGATGATTATCTaGTTGGCGGGTATTCCATGGCCTCTCCTCACCTACTGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: QPTFRQVPIIPAMII*LAGIPWPLLTYWLS
Trigger: GGACAGCCAGTAGGTGAGGAGAGGCCATGGAATACCCGCCAACAAGATAATCATCGCTGGAATAATAGGGACCTGTCTGAATGTAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 72 bp ATCCTTGGAGGCAGATTTAGGAACTTCTCCACGAGCTaGAGTTCTGGCAGAGGTTCCGTGATGAGGCGATCT +
Preference number: 6 (lower is better)
Translates to: ILGGRFRNFSTS*SSGRGSVMRRS
Trigger: AGATCGCCTCATCACGGAACCTCTGCCAGAACTTCAGCTCGTGGAGAAGTTCCTAAATCTGCCTCCAAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CAA 90 bp CTTGGGTTATTCAGACAGGTCCCTATTATTCCAGCGATGATTATCTaGTTGGCGGGTATTCCATGGCCTCTCCTCACCTACTGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LGLFRQVPIIPAMII*LAGIPWPLLTYWLS
Trigger: GGACAGCCAGTAGGTGAGGAGAGGCCATGGAATACCCGCCAACAAGATAATCATCGCTGGAATAATAGGGACCTGTCTGAATAACCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441954.2
CDS CAA 72 bp AGACAGGTCCCTATTATTCCAGCGATGATTATCTTGTaGGCGGGTATTCCATGGCCTCTCCTCACCTACTGG +
Preference number: 6 (lower is better)
Translates to: RQVPIIPAMIIL*AGIPWPLLTYW
Trigger: CCAGTAGGTGAGGAGAGGCCATGGAATACCCGCCAACAAGATAATCATCGCTGGAATAATAGGGACCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312719.10
ENST00000441954.2
CDS TCA 72 bp AGCCTACATTCAGACAGGTCCCTATTATTCCAGCGATaGTTATCTTGTTGGCGGGTATTCCATGGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: SLHSDRSLLFQR*LSCWRVFHGLS
Trigger: GGAGAGGCCATGGAATACCCGCCAACAAGATAATCATCGCTGGAATAATAGGGACCTGTCTGAATGTAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CAA 72 bp TTCAGACAGGTCCCTATTATTCCAGCGATGATTATCTaGTTGGCGGGTATTCCATGGCCTCTCCTCACCTAC +
Preference number: 6 (lower is better)
Translates to: FRQVPIIPAMII*LAGIPWPLLTY
Trigger: GTAGGTGAGGAGAGGCCATGGAATACCCGCCAACAAGATAATCATCGCTGGAATAATAGGGACCTGTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312719.10
ENST00000441954.2
CDS TCA 72 bp TTGGGTTATTCAGACAGGTCCCTATTATTCCAGCGATaGTTATCTTGTTGGCGGGTATTCCATGGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: LGYSDRSLLFQR*LSCWRVFHGLS
Trigger: GGAGAGGCCATGGAATACCCGCCAACAAGATAATCATCGCTGGAATAATAGGGACCTGTCTGAATAACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441954.2
CDS CAA 90 bp TGGCAGAGGTTCCGTGATGAGGCGATCTCCATCGACGACATGAAATaGCTCAATTGGAAAGTATTTCAACCACCTTTCCAGATGTTTGGT +
Preference number: 6 (lower is better)
Translates to: WQRFRDEAISIDDMK*LNWKVFQPPFQMFG
Trigger: ACCAAACATCTGGAAAGGTGGTTGAAATACTTTCCAATTGAGCAATTTCATGTCGTCGATGGAGATCGCCTCATCACGGAACCTCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS TCA 72 bp AGAGGTTCCGTGATGAGGCGATCTCCATCGACGACATaGAATTGCTCAATTGGAAAGTATTTCAACCACCTT +
Preference number: 6 (lower is better)
Translates to: RGSVMRRSPSTT*NCSIGKYFNHL
Trigger: AAGGTGGTTGAAATACTTTCCAATTGAGCAATTTCATGTCGTCGATGGAGATCGCCTCATCACGGAACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS CAA 72 bp TTCCGTGATGAGGCGATCTCCATCGACGACATGAAATaGCTCAATTGGAAAGTATTTCAACCACCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: FRDEAISIDDMK*LNWKVFQPPFQ
Trigger: CTGGAAAGGTGGTTGAAATACTTTCCAATTGAGCAATTTCATGTCGTCGATGGAGATCGCCTCATCACGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312719.10
CDS GCA 72 bp GTAAATCCTTTCTGGAACCTCCTCTGTGATAAAATATaGTGGGCTCTTTTCAATTGTGATTTGCTGAGGGTA +
Preference number: 6 (lower is better)
Translates to: VNPFWNLLCDKI*WALFNCDLLRV
Trigger: TACCCTCAGCAAATCACAATTGAAAAGAGCCCAGCATATTTTATCACAGAGGAGGTTCCAGAAAGGATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312719.10