RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HPSE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000172987

Ensembl transcript IDs: ENST00000370546.5, ENST00000370549.5, ENST00000370552.8, ENST00000404542.5, ENST00000614306.1, ENST00000628193.2

Found 559 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGGTGCCTGGTCCCAGAGAAACGGGTCCCTTCTGGGCAGCCTTaGAGGGCGGTCTCAGGGTCTGCCCCTCTCTCTCCAGTTGCTTCC +
Preference number: 1 (lower is better)
Translates to: GRCLVPEKRVPSGQP*RAVSGSAPLSPVAS
Trigger: GGAAGCAACTGGAGAGAGAGGGGCAGACCCTGAGACCGCCCTGCAAGGCTGCCCAGAAGGGACCCGTTTCTCTGGGACCAGGCACCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CCA 90 bp AAGCCTCAGTGGGAGGTGCCTGGTCCCAGAGAAACGGGTCCCTTCTaGGCAGCCTTGCAGGGCGGTCTCAGGGTCTGCCCCTCTCTCTCC +
Preference number: 1 (lower is better)
Translates to: KPQWEVPGPRETGPF*AALQGGLRVCPSLS
Trigger: GGAGAGAGAGGGGCAGACCCTGAGACCGCCCTGCAAGGCTGCCCAGAAGGGACCCGTTTCTCTGGGACCAGGCACCTCCCACTGAGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR TCA 90 bp GTCTGCCCCTCTCTCTCCAGTTGCTTCCATGCTGAGCACAGCCACTaGCCTGGTGCAGCCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGC +
Preference number: 1 (lower is better)
Translates to: VCPSLSSCFHAEHSH*PGAAWSSGSPFLAR
Trigger: GCGAGCAAGAAAGGGAGAGCCCGAGGACCAGGCTGCACCAGGTCAGTGGCTGTGCTCAGCATGGAAGCAACTGGAGAGAGAGGGGCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR TCA 90 bp GCCCCGCCCCCATCTTGGTACTTCACTTTCCTGCCCTCTCAGAGCTaGAGCCTCAGTGGGAGGTGCCTGGTCCCAGAGAAACGGGTCCCT +
Preference number: 1 (lower is better)
Translates to: APPPSWYFTFLPSQS*SLSGRCLVPEKRVP
Trigger: AGGGACCCGTTTCTCTGGGACCAGGCACCTCCCACTGAGGCTTCAGCTCTGAGAGGGCAGGAAAGTGAAGTACCAAGATGGGGGCGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CCA 90 bp AAGGAGGTGTCTGGACCTGTGGAGCCGCTGAGCCTTGTGGCTGAGTaGGCAGGCTCTGGATTATTTCGCGCTCGGCAACCCATTTCCCCG +
Preference number: 1 (lower is better)
Translates to: KEVSGPVEPLSLVAE*AGSGLFRARQPISP
Trigger: CGGGGAAATGGGTTGCCGAGCGCGAAATAATCCAGAGCCTGCCCACTCAGCCACAAGGCTCAGCGGCTCCACAGGTCCAGACACCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CCA 90 bp GCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGGACCTTTaGTTACTCTTGTTATATCAGGGGGCCCTGCAGTCGCACCTGTAC +
Preference number: 1 (lower is better)
Translates to: AKQTIGPQGQALRDL*LLLLYQGALQSHLY
Trigger: GTACAGGTGCGACTGCAGGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR GCA 90 bp TTACTTTTGAAGCACCCGCTTCCCAGAAGAACTGCCAGTGATGGATaGCACTGTCAGGAACCCAGATGCGCACGCTCATACATCAGCCGG +
Preference number: 1 (lower is better)
Translates to: LLLKHPLPRRTASDG*HCQEPRCARSYISR
Trigger: CCGGCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCTTCAAAAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR GCA 90 bp CCCAGAAGAACTGCCAGTGATGGATGCCACTGTCAGGAACCCAGATaGGCACGCTCATACATCAGCCGGGAAATCATACAAACAGCTCTC +
Preference number: 1 (lower is better)
Translates to: PRRTASDGCHCQEPR*ARSYISREIIQTAL
Trigger: GAGAGCTGTTTGTATGATTTCCCGGCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CCA 90 bp CATTTAGTCTCTTTGGAGAGCAAGTCTGTGTTGATTCCAGCAGGATaGGGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGAT +
Preference number: 1 (lower is better)
Translates to: HLVSLESKSVLIPAG*GSRGWLLGCLKTED
Trigger: ATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCCCCATCCTGCTGGAATCAACACAGACTTGCTCTCCAAAGAGACTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
3UTR TCA 90 bp CAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTaGCAGGATCATGGGGAGTTGTCTGGAAACATTTCTCCTGGGAGT +
Preference number: 1 (lower is better)
Translates to: QQQQAKVWICGYNAV*QDHGELSGNISPGS
Trigger: ACTCCCAGGAGAAATGTTTCCAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR GCA 90 bp GACAGGATCATGGGGAGTTGTCTGGAAACATTTCTCCTGGGAGTGTaGTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTG +
Preference number: 1 (lower is better)
Translates to: DRIMGSCLETFLLGV*CQLVFIVHMKGNIL
Trigger: CAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCAGACAACTCCCCATGATCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR TCA 90 bp GAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTaGTGTTTCAGTATGCTTTCTCTTTGTACTCAAACTCTCCCTCAT +
Preference number: 1 (lower is better)
Translates to: ERSNLLCPVGVCVCT*CFSMLSLCTQTLPH
Trigger: ATGAGGGAGAGTTTGAGTACAAAGAGAAAGCATACTGAAACATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CCA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTaGGATGGATGTGGCCTACCTAGGCTAAGATCACGCTATGACATT +
Preference number: 1 (lower is better)
Translates to: CLYPYIGTGDVYIFL*DGCGLPRLRSRYDI
Trigger: AATGTCATAGCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
3UTR GCA 90 bp CGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATaGCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTT +
Preference number: 1 (lower is better)
Translates to: RFHSAHEGKHSALYT*LYPYIGTGDVYIFL
Trigger: AAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR GCA 90 bp ACTCTCCCTCATAGCAACATGAAGAATGATGACTACTTTTTGTTGTaGCTAATAAACTGCTCTCCACTCAATGAATATTGTTACTTGACT +
Preference number: 1 (lower is better)
Translates to: TLPHSNMKNDDYFLL*LINCSPLNEYCYLT
Trigger: AGTCAAGTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTCATCATTCTTCATGTTGCTATGAGGGAGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR GCA 90 bp AGCAACATGAAGAATGATGACTACTTTTTGTTGTGCCTAATAAACTaGTCTCCACTCAATGAATATTGTTACTTGACTCCCATTACAACT +
Preference number: 1 (lower is better)
Translates to: SNMKNDDYFLLCLIN*SPLNEYCYLTPITT
Trigger: AGTTGTAATGGGAGTCAAGTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTCATCATTCTTCATGTTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CAA 90 bp TGGGAGGTGCCTGGTCCCAGAGAAACGGGTCCCTTCTGGGCAGCCTaGCAGGGCGGTCTCAGGGTCTGCCCCTCTCTCTCCAGTTGCTTC +
Preference number: 2 (lower is better)
Translates to: WEVPGPRETGPFWAA*QGGLRVCPSLSSCF
Trigger: GAAGCAACTGGAGAGAGAGGGGCAGACCCTGAGACCGCCCTGCAAGGCTGCCCAGAAGGGACCCGTTTCTCTGGGACCAGGCACCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR GCA 90 bp GGGGGCCCTGCAGTCGCACCTGTACCAGTATGTAGAAGAGACGTTGATATCTGCTGCCCTAGGCAACCCTaGCTTGCCCCCGCCCCATTC +
Preference number: 2 (lower is better)
Translates to: GGPAVAPVPVCRRDVDICCPRQP*LAPAPF
Trigger: GAATGGGGCGGGGGCAAGGCAGGGTTGCCTAGGGCA...GCAGATATCAACGTCTCTTCTACATACTGGTACAGGTGCGACTGCAGGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CAA 90 bp ACAGCCACTGACCTGGTGCAGCCTGGTCCTCGGGCTCTCCCTTTCTaGCTCGCTGTAGTACATCTGCTGTATGCTGTTCCTCCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: TATDLVQPGPRALPF*LAVVHLLYAVPPVL
Trigger: AAGCACAGGAGGAACAGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGGCTGCACCAGGTCAGTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR GCA 90 bp ATAAAAGCCCATGGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGGCTGGCCATTCAGTTaGACTGACCTTTCTTCTGAA +
Preference number: 2 (lower is better)
Translates to: IKAHGDWRDDQCPAGPKGGWPFS*TDLSSE
Trigger: TTCAGAAGAAAGGTCAGTGCAACTGAATGGCCAGCC...CCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTTTTAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370546.5
3UTR CAA 90 bp ACCATAGGTCCCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTaGTTATATCAGGGGGCCCTGCAGTCGCACCTGTACCAGTATGTA +
Preference number: 2 (lower is better)
Translates to: TIGPQGQALRDLWLL*LYQGALQSHLYQYV
Trigger: TACATACTGGTACAGGTGCGACTGCAGGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGGGACCTATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR GCA 90 bp CCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGCTGTAGTACATCTGCTGTATGCTTGTCAGGAACCCAGATaGGCACGCTCATACATCAGC +
Preference number: 2 (lower is better)
Translates to: PGPRALPFLLAVVHLLYACQEPR*ARSYIS
Trigger: GCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACA...AGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR GCA 90 bp GGGGGCCCTGCAGTCGCACCTGTACCAGTATGTAGAAGAGACGTTGATATCTGCATCCTTAACTCCGTGTaGGTCTTAGGCAGCCTCCCT +
Preference number: 2 (lower is better)
Translates to: GGPAVAPVPVCRRDVDICILNSV*VLGSLP
Trigger: AGGGAGGCTGCCTAAGACGCACACGGAGTTAAGGAT...GCAGATATCAACGTCTCTTCTACATACTGGTACAGGTGCGACTGCAGGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp CCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTTGTTATATCAGGGGGCCCTTTGCTTTGTCCAGTTaGGGTGTGTGTGTGTACCTG +
Preference number: 2 (lower is better)
Translates to: PRARLLGTFGYSCYIRGPFALSS*GVCVYL
Trigger: CAGGTACACACACACACCCCAACTGGACAAAGCAAA...GGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CAA 90 bp CCTCCTCTTTGGTCTAATCTCCCTTCCATCTCTCACTTTGCAGACTaGGCCCAAATCCTTAACTCCGTGTGCGTCTTAGGCAGCCTCCCT +
Preference number: 2 (lower is better)
Translates to: PPLWSNLPSISHFAD*AQILNSVCVLGSLP
Trigger: AGGGAGGCTGCCTAAGACGCACACGGAGTTAAGGATTTGGGCCAAGTCTGCAAAGTGAGAGATGGAAGGGAGATTAGACCAAAGAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR GCA 90 bp AGCACCCGCTTCCCAGAAGAACTGCCAGTGATGGATGCCACTGTCAGGAACCCATTTCTCCTGGGAGTGTaGTGTCAGCTCGTTTTCATA +
Preference number: 2 (lower is better)
Translates to: STRFPEELPVMDATVRNPFLLGV*CQLVFI
Trigger: TATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA...TGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp CCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTTGTTATATCAGGGGGCCCCAGAGAAGAAGGAGTTaGGAGAGGATGGGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: PRARLLGTFGYSCYIRGPQRRRS*ERMGFC
Trigger: ACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTG...GGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTTCAGCTGTAGCTCATTaGCAAAGACCCTCATGCCCC +
Preference number: 2 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAASAVAH*QRPSCP
Trigger: GGGGCATGAGGGTCTTTGCCAATGAGCTACAGCTGA...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR TCA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGCTGCTCTCCACTCAATaGATATTGTTACTTGACTCC +
Preference number: 2 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRLLSTQ*ILLLDS
Trigger: GGAGTCAAGTAACAATATTCATTGAGTGGAGAGCAG...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR GCA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCAGCCTCCCTAGTCTCTaGCCTAGGCAACCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTSLPSL*PRQPCL
Trigger: AAGGCAGGGTTGCCTAGGGCAGAGACTAGGGAGGCT...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTTGGGGCAGCAGGGGCTaGTTGCTAGGATGTCTGAAA +
Preference number: 2 (lower is better)
Translates to: GSVLSARFHSAHEGKHSAWGSRG*LLGCLK
Trigger: TTTCAGACATCCTAGCAACCAGCCCCTGCTGCCCCA...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGAACTCTGGGGGAATCTaGATTCACAGAGGAATAGAA +
Preference number: 2 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRNSGGI*IHRGIE
Trigger: TTCTATTCCTCTGTGAATCCAGATTCCCCCAGAGTT...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CAA 90 bp TGCCTTGCCCCCGCCCCATTCCTGTCCTTTCACAAACAGCAGAAATaGTATCACCGTCTCACTTGGAACAGTGTCAAATCTCTCCTCCTT +
Preference number: 2 (lower is better)
Translates to: CLAPAPFLSFHKQQK*YHRLTWNSVKSLLL
Trigger: AAGGAGGAGAGATTTGACACTGTTCCAAGTGAGACGGTGATACAATTTCTGCTGTTTGTGAAAGGACAGGAATGGGGCGGGGGCAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR TCA 90 bp AGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGAGAGCAAGTCTGTGTTaGTTCCAGCAGGATGGGGCA +
Preference number: 2 (lower is better)
Translates to: SSSSRLRFGFVVIMLCDRRASLC*FQQDGA
Trigger: TGCCCCATCCTGCTGGAATCAACACAGACTTGCTCT...CCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp GATGTCTACATTTTCCTTTGGGATGGATGTGGCCTACCTAGGCTAAGATCACGCAGGATACTACTGGAGTaGAGGAGTGGAAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: DVYIFLWDGCGLPRLRSRRILLE*RSGSSP
Trigger: TGGGCTGCTTCCACTCCTCCACTCCAGTAGTATCCT...GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
3UTR-3UTR CCA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATTTGATTCCAGCAGGATaGGGCAGCAGGGGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDLIPAG*GSRGWL
Trigger: CAACCAGCCCCTGCTGCCCCATCCTGCTGGAATCAA...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp AAGACCCTCATGCCCCTTGAATCATATAGAACGTCCTCATCCCCCACTTCACACTGGAAACATTTCTCCTaGGAGTGTGCTGTCAGCTCG +
Preference number: 2 (lower is better)
Translates to: KTLMPLESYRTSSSPTSHWKHFS*ECAVSS
Trigger: CGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCA...GTGTGAAGTGGGGGATGAGGACGTTCTATATGATTCAAGGGGCATGAGGGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp GGCAGAGAAGAAGGAGTTGGGAGAGGATGGGTTTTTGTAGGTCCACCCAGTTTTTGGAAACATTTCTCCTaGGAGTGTGCTGTCAGCTCG +
Preference number: 2 (lower is better)
Translates to: GREEGVGRGWVFVGPPSFWKHFS*ECAVSS
Trigger: CGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCA...AAAACTGGGTGGACCTACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp CCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTTGTTATATCAGGGGGCCCCCCATTACTCCCCTATaGAAAGAGATGTGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: PRARLLGTFGYSCYIRGPPITPL*KEMCQK
Trigger: TTTTTGACACATCTCTTTCCATAGGGGAGTAATGGG...GGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTTTTGCTTTGTCCAGTTaGGGTGTGTGTGTGTACCTG +
Preference number: 2 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAAFALSS*GVCVYL
Trigger: CAGGTACACACACACACCCCAACTGGACAAAGCAAA...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCGGAGTTGGGAGAGGATaGGTTTTTGTAGGTCCACCC +
Preference number: 2 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTGVGRG*VFVGPP
Trigger: GGGTGGACCTACAAAAACCCATCCTCTCCCAACTCC...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR GCA 90 bp GAGGGCAGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTTTTCTCCTGGGAGTGTaGTGTCAGCTCGTTTTCATA +
Preference number: 2 (lower is better)
Translates to: EGSSSSRLRFGFVVIMLCFLLGV*CQLVFI
Trigger: TATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA...ACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCTGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATAACAGAGGATACTACTaGAGTGGAGGAGTGGAAGCA +
Preference number: 2 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHNRGYY*SGGVEA
Trigger: TGCTTCCACTCCTCCACTCCAGTAGTATCCTCTGTT...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR TCA 90 bp GAGGGCAGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGCTAAGATCACGCTATaGCATTTAGTCTCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: EGSSSSRLRFGFVVIMLCAKITL*HLVSLE
Trigger: CTCCAAAGAGACTAAATGTCATAGCGTGATCTTAGC...ACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCTGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR TCA 90 bp AACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACATCCACAGACCAGCAGGCCAGGGCTaGCACACCCATTACTCCCCT +
Preference number: 2 (lower is better)
Translates to: NKSIIPVIYPEKENHIHRPAGQG*HTHYSP
Trigger: AGGGGAGTAATGGGTGTGTCAGCCCTGGCCTGCTGG...TCTGTGGATGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATAGGATACTACTGGAGTaGAGGAGTGGAAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHRILLE*RSGSSP
Trigger: TGGGCTGCTTCCACTCCTCCACTCCAGTAGTATCCT...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATTTGATTCCAGCAGGATaGGGCAGCAGGGGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDLIPAG*GSRGWL
Trigger: CAACCAGCCCCTGCTGCCCCATCCTGCTGGAATCAA...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
3UTR-3UTR GCA 90 bp GGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGGAAACATTTCTCCTGGGAGTGTaGTGTCAGCTCGTTTTCATA +
Preference number: 2 (lower is better)
Translates to: GFVVIMLCDRIMGSCLETFLLGV*CQLVFI
Trigger: TATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA...TGTTTCCAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR TCA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATGCTAAGATCACGCTATaGCATTTAGTCTCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDAKITL*HLVSLE
Trigger: CTCCAAAGAGACTAAATGTCATAGCGTGATCTTAGC...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCAGGATACTACTGGAGTaGAGGAGTGGAAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFRILLE*RSGSSP
Trigger: TGGGCTGCTTCCACTCCTCCACTCCAGTAGTATCCT...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp GACTACTTTTTGTTGTGCCTAATAAACTGCTCTCCACTCAATGAATATTGTTACTGGGGCAGCAGGGGCTaGTTGCTAGGATGTCTGAAA +
Preference number: 2 (lower is better)
Translates to: DYFLLCLINCSPLNEYCYWGSRG*LLGCLK
Trigger: TTTCAGACATCCTAGCAACCAGCCCCTGCTGCCCCA...GTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCGGAGTTGGGAGAGGATaGGTTTTTGTAGGTCCACCC +
Preference number: 2 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFGVGRG*VFVGPP
Trigger: GGGTGGACCTACAAAAACCCATCCTCTCCCAACTCC...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CAA 90 bp TTGTTGTGCCTAATAAACTGCTCTCCACTCAATGAATATTGTTACTaGACTCCCATTACAACTCTGGGGGAATCTGGATTCACAGAGGAA +
Preference number: 2 (lower is better)
Translates to: LLCLINCSPLNEYCY*TPITTLGESGFTEE
Trigger: TTCCTCTGTGAATCCAGATTCCCCCAGAGTTGTAATGGGAGTCAAGTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CAA 90 bp ACAATTAAGGGCTTACCCTATAGAGCCCCTAATATTCTCTTAATTTaGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: TIKGLPYRAPNILLI*ERSNLLCPVGVCVC
Trigger: ACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAATTAAGAGAATATTAGGGGCTCTATAGGGTAAGCCCTTAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR TCA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCTAAGATCACGCTATaGCATTTAGTCTCTTTGGAG +
Preference number: 2 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHAKITL*HLVSLE
Trigger: CTCCAAAGAGACTAAATGTCATAGCGTGATCTTAGC...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCAACAGAGGATACTACTaGAGTGGAGGAGTGGAAGCA +
Preference number: 2 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFNRGYY*SGGVEA
Trigger: TGCTTCCACTCCTCCACTCCAGTAGTATCCTCTGTT...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CCA 90 bp GACTACTTTTTGTTGTGCCTAATAAACTGCTCTCCACTCAATGAATATTGTTACCTCCCATTACAACTCTaGGGGAATCTGGATTCACAG +
Preference number: 2 (lower is better)
Translates to: DYFLLCLINCSPLNEYCYLPLQL*GNLDSQ
Trigger: CTGTGAATCCAGATTCCCCCAGAGTTGTAATGGGAG...GTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR TCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCGTGTGTGTGTGTACCTaGTGTTTCAGTATGCTTTCT +
Preference number: 2 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFVCVCT*CFSMLS
Trigger: AGAAAGCATACTGAAACATCAGGTACACACACACAC...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR TCA 90 bp AACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACATCCACAGACTGCTCTCCACTCAATaGATATTGTTACTTGACTCC +
Preference number: 2 (lower is better)
Translates to: NKSIIPVIYPEKENHIHRLLSTQ*ILLLDS
Trigger: GGAGTCAAGTAACAATATTCATTGAGTGGAGAGCAG...TCTGTGGATGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CAA 90 bp CAAACTCTCCCTCATAGCAACATGAAGAATGATGACTACTTTTTGTaGTGCCTAATAAACTGCTCTCCACTCAATGAATATTGTTACTTG +
Preference number: 2 (lower is better)
Translates to: QTLPHSNMKNDDYFL*CLINCSPLNEYCYL
Trigger: CAAGTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTCATCATTCTTCATGTTGCTATGAGGGAGAGTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CAA 90 bp ACTCAAACTCTCCCTCATAGCAACATGAAGAATGATGACTACTTTTaGTTGTGCCTAATAAACTGCTCTCCACTCAATGAATATTGTTAC +
Preference number: 2 (lower is better)
Translates to: TQTLPHSNMKNDDYF*LCLINCSPLNEYCY
Trigger: GTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTCATCATTCTTCATGTTGCTATGAGGGAGAGTTTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR TCA 90 bp AACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACATCCACAGATCCCTCATAGCAACATaGAGAATGATGACTACTTTT +
Preference number: 2 (lower is better)
Translates to: NKSIIPVIYPEKENHIHRSLIAT*RMMTTF
Trigger: AAAAGTAGTCATCATTCTTCATGTTGCTATGAGGGA...TCTGTGGATGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR GCA 90 bp GACTACTTTTTGTTGTGCCTAATAAACTGCTCTCCACTCAATGAATATTGTTACTCTGCTCTATACACATaGCTTTATCCTTATATAGGT +
Preference number: 2 (lower is better)
Translates to: DYFLLCLINCSPLNEYCYSALYT*LYPYIG
Trigger: ACCTATATAAGGATAAAGGCATGTGTATAGAGCAGA...GTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CCA 72 bp TGGGAGGTGCCTGGTCCCAGAGAAACGGGTCCCTTCTaGGCAGCCTTGCAGGGCGGTCTCAGGGTCTGCCCC +
Preference number: 3 (lower is better)
Translates to: WEVPGPRETGPF*AALQGGLRVCP
Trigger: GGGGCAGACCCTGAGACCGCCCTGCAAGGCTGCCCAGAAGGGACCCGTTTCTCTGGGACCAGGCACCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR GCA 72 bp CTGGTCCCAGAGAAACGGGTCCCTTCTGGGCAGCCTTaGAGGGCGGTCTCAGGGTCTGCCCCTCTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: LVPEKRVPSGQP*RAVSGSAPLSP
Trigger: TGGAGAGAGAGGGGCAGACCCTGAGACCGCCCTGCAAGGCTGCCCAGAAGGGACCCGTTTCTCTGGGACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR GCA 72 bp AACTCCGTGTGCGTCTTAGGCAGCCTCCCTAGTCTCTaGCCTAGGCAACCCTGCCTTGCCCCCGCCCCATTC +
Preference number: 3 (lower is better)
Translates to: NSVCVLGSLPSL*PRQPCLAPAPF
Trigger: GAATGGGGCGGGGGCAAGGCAGGGTTGCCTAGGGCAGAGACTAGGGAGGCTGCCTAAGACGCACACGGAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CCA 72 bp TCTGGACCTGTGGAGCCGCTGAGCCTTGTGGCTGAGTaGGCAGGCTCTGGATTATTTCGCGCTCGGCAACCC +
Preference number: 3 (lower is better)
Translates to: SGPVEPLSLVAE*AGSGLFRARQP
Trigger: GGGTTGCCGAGCGCGAAATAATCCAGAGCCTGCCCACTCAGCCACAAGGCTCAGCGGCTCCACAGGTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp GGGGGCCCTGCAGTCGCACCTGTACCAGTATGTAGAAGAGACGTTGATATCTGCCGCCCCGCCCCCATCTaGGTACTTCACTTTCCTGCC +
Preference number: 3 (lower is better)
Translates to: GGPAVAPVPVCRRDVDICRPAPI*VLHFPA
Trigger: GGCAGGAAAGTGAAGTACCAAGATGGGGGCGGGGCG...GCAGATATCAACGTCTCTTCTACATACTGGTACAGGTGCGACTGCAGGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR GCA 72 bp AAGCACCCGCTTCCCAGAAGAACTGCCAGTGATGGATaGCACTGTCAGGAACCCAGATGCGCACGCTCATAC +
Preference number: 3 (lower is better)
Translates to: KHPLPRRTASDG*HCQEPRCARSY
Trigger: GTATGAGCGTGCGCATCTGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CCA 72 bp ACCATAGGTCCCCAGGGCCAGGCTCTTAGGGACCTTTaGTTACTCTTGTTATATCAGGGGGCCCTGCAGTCG +
Preference number: 3 (lower is better)
Translates to: TIGPQGQALRDL*LLLLYQGALQS
Trigger: CGACTGCAGGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGGGACCTATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR GCA 72 bp CACTTTGCAGACTTGGCCCAAATCCTTAACTCCGTGTaGGTCTTAGGCAGCCTCCCTAGTCTCTGCCCTAGG +
Preference number: 3 (lower is better)
Translates to: HFADLAQILNSV*VLGSLPSLCPR
Trigger: CCTAGGGCAGAGACTAGGGAGGCTGCCTAAGACGCACACGGAGTTAAGGATTTGGGCCAAGTCTGCAAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CCA 72 bp ATTGACATTCTTGACCACATAAAAGCCCATGGTGACTaGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGG +
Preference number: 3 (lower is better)
Translates to: IDILDHIKAHGD*RDDQCPAGPKG
Trigger: CCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTTTTATGTGGTCAAGAATGTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
3UTR-3UTR CAA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGTGTCTACATTTTCCTTaGGGATGGATGTGGCCTACC +
Preference number: 3 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRCLHFP*GWMWPT
Trigger: GGTAGGCCACATCCATCCCAAAGGAAAATGTAGACA...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTCGGGCTCTCCCTTTCTaGCTCGCTGTAGTACATCTG +
Preference number: 3 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAARALPF*LAVVHL
Trigger: CAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCG...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR GCA 72 bp ACTGCCAGTGATGGATGCCACTGTCAGGAACCCAGATaGGCACGCTCATACATCAGCCGGGAAATCATACAA +
Preference number: 3 (lower is better)
Translates to: TASDGCHCQEPR*ARSYISREIIQ
Trigger: TTGTATGATTTCCCGGCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACAGTGGCATCCATCACTGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp AGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGGGCAGCAGGGGCTGGTaGCTAGGATGTCTGAAAACA +
Preference number: 3 (lower is better)
Translates to: SSSSRLRFGFVVIMLCDRGSRGW*LGCLKT
Trigger: TGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC...CCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp AACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGGGCAGCAGGGGCTGGTaGCTAGGATGTCTGAAAACA +
Preference number: 3 (lower is better)
Translates to: NISPGSVLSARFHSAHEGGSRGW*LGCLKT
Trigger: TGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC...CCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp AACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGGAGAGCAAGTCTGTGTaGATTCCAGCAGGATGGGGC +
Preference number: 3 (lower is better)
Translates to: NISPGSVLSARFHSAHEGESKSV*IPAGWG
Trigger: GCCCCATCCTGCTGGAATCAACACAGACTTGCTCTC...CCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp TTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACGAGAGCAAGTCTGTGTaGATTCCAGCAGGATGGGGC +
Preference number: 3 (lower is better)
Translates to: FLLGVCCQLVFIVHMKGNESKSV*IPAGWG
Trigger: GCCCCATCCTGCTGGAATCAACACAGACTTGCTCTC...GTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp AGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGGGCAGCAGGGGCTGGTaGCTAGGATGTCTGAAAACA +
Preference number: 3 (lower is better)
Translates to: SRLRFGFVVIMLCDRIMGGSRGW*LGCLKT
Trigger: TGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC...CCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTTTGGAGAGGTCTAATTaGCTTTGTCCAGTTGGGGTG +
Preference number: 3 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAALERSN*LCPVGV
Trigger: CACCCCAACTGGACAAAGCAAATTAGACCTCTCCAA...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCCGGGCTCTCCCTTTCTaGCTCGCTGTAGTACATCTG +
Preference number: 3 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTRALPF*LAVVHL
Trigger: CAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCG...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp GAGGGCAGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTTGTCTACATTTTCCTTaGGGATGGATGTGGCCTACC +
Preference number: 3 (lower is better)
Translates to: EGSSSSRLRFGFVVIMLCCLHFP*GWMWPT
Trigger: GGTAGGCCACATCCATCCCAAAGGAAAATGTAGACA...ACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCTGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTCACAAACAGCAGAAATaGTATCACCGTCTCACTTGG +
Preference number: 3 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAAHKQQK*YHRLTW
Trigger: CCAAGTGAGACGGTGATACAATTTCTGCTGTTTGTG...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR GCA 72 bp ATGGGGAGTTGTCTGGAAACATTTCTCCTGGGAGTGTaGTGTCAGCTCGTTTTCATAGTGCACATGAAGGGA +
Preference number: 3 (lower is better)
Translates to: MGSCLETFLLGV*CQLVFIVHMKG
Trigger: TCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCAGACAACTCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR CCA 72 bp CCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTaGGATGGATGTGGCCTACCTAGGCTAAGATCACGC +
Preference number: 3 (lower is better)
Translates to: PYIGTGDVYIFL*DGCGLPRLRSR
Trigger: GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
3UTR TCA 72 bp CAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTaGCAGGATCATGGGGAGTTGTCTGGAAACATTTCT +
Preference number: 3 (lower is better)
Translates to: QAKVWICGYNAV*QDHGELSGNIS
Trigger: AGAAATGTTTCCAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR CCA 72 bp TTGTTACTTGACTCCCATTACAACTCTGGGGGAATCTaGATTCACAGAGGAATAGAACCTTCTTACCAAATC +
Preference number: 3 (lower is better)
Translates to: LLLDSHYNSGGI*IHRGIEPSYQI
Trigger: GATTTGGTAAGAAGGTTCTATTCCTCTGTGAATCCAGATTCCCCCAGAGTTGTAATGGGAGTCAAGTAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp AACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACATCCACAGATGTCTACATTTTCCTTaGGGATGGATGTGGCCTACC +
Preference number: 3 (lower is better)
Translates to: NKSIIPVIYPEKENHIHRCLHFP*GWMWPT
Trigger: GGTAGGCCACATCCATCCCAAAGGAAAATGTAGACA...TCTGTGGATGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp AACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACATCCACAGAATTTGCTTTGTCCAGTaGGGGTGTGTGTGTGTACCT +
Preference number: 3 (lower is better)
Translates to: NKSIIPVIYPEKENHIHRICFVQ*GCVCVP
Trigger: AGGTACACACACACACCCCAACTGGACAAAGCAAAT...TCTGTGGATGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp AACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACATCCACAGAAGACCCTCATGCCCCTaGAATCATATAGAACGTCCT +
Preference number: 3 (lower is better)
Translates to: NKSIIPVIYPEKENHIHRRPSCP*NHIERP
Trigger: AGGACGTTCTATATGATTCAAGGGGCATGAGGGTCT...TCTGTGGATGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR TCA 72 bp AATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTaGTGTTTCAGTATGCTTTCTCTTTGTACTCAAACT +
Preference number: 3 (lower is better)
Translates to: NLLCPVGVCVCT*CFSMLSLCTQT
Trigger: AGTTTGAGTACAAAGAGAAAGCATACTGAAACATCAGGTACACACACACACCCCAACTGGACAAAGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR GCA 72 bp AGTGCACATGAAGGGAAACATTCTGCTCTATACACATaGCTTTATCCTTATATAGGTACAGGTGATGTCTAC +
Preference number: 3 (lower is better)
Translates to: SAHEGKHSALYT*LYPYIGTGDVY
Trigger: GTAGACATCACCTGTACCTATATAAGGATAAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
3UTR TCA 72 bp CTTTTTGTTGTGCCTAATAAACTGCTCTCCACTCAATaGATATTGTTACTTGACTCCCATTACAACTCTGGG +
Preference number: 3 (lower is better)
Translates to: LFVVPNKLLSTQ*ILLLDSHYNSG
Trigger: CCCAGAGTTGTAATGGGAGTCAAGTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR-3UTR CAA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCATTGTAATTTTACTTTaGAAGCACCCGCTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFIVILL*KHPLPR
Trigger: TCTGGGAAGCGGGTGCTTCAAAAGTAAAATTACAAT...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR GCA 72 bp AAGAATGATGACTACTTTTTGTTGTGCCTAATAAACTaGTCTCCACTCAATGAATATTGTTACTTGACTCCC +
Preference number: 3 (lower is better)
Translates to: KNDDYFLLCLIN*SPLNEYCYLTP
Trigger: GGGAGTCAAGTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTCATCATTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR GCA 72 bp CATAGCAACATGAAGAATGATGACTACTTTTTGTTGTaGCTAATAAACTGCTCTCCACTCAATGAATATTGT +
Preference number: 3 (lower is better)
Translates to: HSNMKNDDYFLL*LINCSPLNEYC
Trigger: ACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTCATCATTCTTCATGTTGCTATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CCCATGGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCGGCCGTGGCTTCCGCTaGAGCCCAGCCACATGCACA +
Preference number: 4 (lower is better)
Translates to: PMVTGGMTNVRPARRGRGGRGFR*SPATCT
Trigger: TGTGCATGTGGCTGGGCTCCAGCGGAAGCCACGGCC...GCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp TCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACTGGCTGCCATTTACTaGCCGGCCATGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: SGRPEGGGASILGGSRRPLAAIY*PAMHGP
Trigger: CGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAG...TGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp GGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAAGGGGGCGGGAGTTGCTaGAGGGCATGGCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GDWRDDQCPAGPKGAGLQGGGSC*RAWLQG
Trigger: TCCCTGAAGCCATGCCCTCCAGCAACTCCCGCCCCC...TTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp AAGCCCATGGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGCGGGGCTTCAATTCTaGGAGGGTCCCGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: KPMVTGGMTNVRPARRGRAGLQF*EGPVVH
Trigger: GTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGC...CCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp ATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTTGCCTCCAGCTGAGGTaGTCACCACACCTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: MSGRPEGGGASILGGSRRCLQLR*SPHLQA
Trigger: GGCTTGAAGGTGTGGTGACCACCTCAGCTGGAGGCA...ACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp GACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCTCGAGCCAGCCATCATaGATGATGGACGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: DWRDDQCPAGPKGAGLQFSSQPS*MMDGSS
Trigger: GCTGGATCCGTCCATCATTCATGATGGCTGGCTCGA...GAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp GGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCGTTTGTGCCTCCAGCTaGGGTGGTCACCACACCTTC +
Preference number: 4 (lower is better)
Translates to: GGASILGGSRRPPSLRAGVCASS*GGHHTF
Trigger: GAAGGTGTGGTGACCACCTCAGCTGGAGGCACAAAC...GCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp AGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCGGAAGTCGGTCCTTTTaGCCCCGAAGCGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: RGRGFNSGRVPSSTITKGGSRSF*PRSAER
Trigger: CCTTTCTGCGCTTCGGGGGCAAAAGGACCGACTTCC...GCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp ATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTACCATCACTAAGGGCTaGCCATTCAGTTGCACTGAC +
Preference number: 4 (lower is better)
Translates to: MSGRPEGGGASILGGSRRTITKG*PFSCTD
Trigger: GTCAGTGCAACTGAATGGCCAGCCCTTAGTGATGGT...ACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp GGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCCATCATCTAGGAGGGCGATaGCATTCTTCCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GASILGGSRRPPSLRAGHHLGGR*HSSSAA
Trigger: GGCGGCCGAGGAAGAATGTCATCGCCCTCCTAGATG...ATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp GGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCTGGGATGGACGGATCCAGCTaGAGAGAGAGGAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GGMTNVRPARRGRGFNSGMDGSS*RERKFS
Trigger: TGAGAACTTCCTCTCTCTGCAGCTGGATCCGTCCAT...CCCAGAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGTGCCCTAGGCAACCCTaGCTTGCCCCCGCCCCATTC +
Preference number: 4 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRCPRQP*LAPAPF
Trigger: GAATGGGGCGGGGGCAAGGCAGGGTTGCCTAGGGCA...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTTGTTATATCAGGGGGCCCTGCCCTAGGCAACCCTaGCTTGCCCCCGCCCCATTC +
Preference number: 4 (lower is better)
Translates to: PRARLLGTFGYSCYIRGPCPRQP*LAPAPF
Trigger: GAATGGGGCGGGGGCAAGGCAGGGTTGCCTAGGGCA...GGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGGGGTCACCAAGCGCTTaGAGCTTAGGAAATCGAGCC +
Preference number: 4 (lower is better)
Translates to: GRGFNSGRVPSSTITKGWGSPSA*SLGNRA
Trigger: GGCTCGATTTCCTAAGCTCCAAGCGCTTGGTGACCC...CCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp GACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCCTGCCCGGCCATGCATaGTCCGATAGTTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: DWRDDQCPAGPKGAGLQFLPGHA*SDSYLA
Trigger: AGCCAAATAACTATCGGACCATGCATGGCCGGGCAG...GAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp GAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCACAGCCAAGACTTTaGGGCCGATCAGGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: EGGGASILGGSRRPPSLRAQPRL*GRSGAC
Trigger: ACAAGCGCCTGATCGGCCCCAAAGTCTTGGCTGTGC...CCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp GGGGGCCCTGCAGTCGCACCTGTACCAGTATGTAGAAGAGACGTTGATATCTGCGACCTGTGGAGCCGCTaGGCCTTGTGGCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GGPAVAPVPVCRRDVDICDLWSR*ALWLSG
Trigger: CCCACTCAGCCACAAGGCTCAGCGGCTCCACAGGTC...GCAGATATCAACGTCTCTTCTACATACTGGTACAGGTGCGACTGCAGGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCCCTTTTAGATTCAGATaGTCCCACAGTATTGACATC +
Preference number: 4 (lower is better)
Translates to: VRPARRGRGFNSGRVPSSPFRFR*SHSIDI
Trigger: GATGTCAATACTGTGGGATCATCTGAATCTAAAAGG...GGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp ATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCCTCAGGTTCTGGAACTaGAGGAAGTCGGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: MTNVRPARRGRGFNSGRVLRFWN*RKSVLL
Trigger: CAAAAGGACCGACTTCCTGCAGTTCCAGAACCTGAG...GACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGCCTTCTGGGCAGCCTTaGAGGGCGGTCTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRPSGQP*RAVSGS
Trigger: AGACCCTGAGACCGCCCTGCAAGGCTGCCCAGAAGG...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GGGGGCCCTGCAGTCGCACCTGTACCAGTATGTAGAAGAGACGTTGATATCTGCACCCATTTCCCCGGGTaGCCCTGGGCGAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: GGPAVAPVPVCRRDVDICTHFPG*PWASHG
Trigger: TCCATGGCTCGCCCAGGGGCACCCGGGGAAATGGGT...GCAGATATCAACGTCTCTTCTACATACTGGTACAGGTGCGACTGCAGGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGGGTTCCTCAGGTTCTaGAACTGCAGGAAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: EGGGASILGGSRRPPSLRGFLRF*NCRKSV
Trigger: GACCGACTTCCTGCAGTTCCAGAACCTGAGGAACCC...CCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp ATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCGCTGCCTTCTCCCTTTaGAGCTCCAGCATAACATCA +
Preference number: 4 (lower is better)
Translates to: MTNVRPARRGRGFNSGRVAAFSL*SSSITS
Trigger: TGATGTTATGCTGGAGCTCCAAAGGGAGAAGGCAGC...GACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp CAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGACACTCGGCCAGGCCGTaGCTTCCGCTGGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QQGLVARMSENRGYYWSGHSARP*LPLEPS
Trigger: GCTGGGCTCCAGCGGAAGCCACGGCCTGGCCGAGTG...TCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR GCA 90 bp AGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCAGCATAACATCAGGGTaGTGGGCAATCTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RGRGFNSGRVPSSTITKGSITSG*WAILQP
Trigger: AGGCTGCAAGATTGCCCAGCACCCTGATGTTATGCT...GCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp AGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCCGGATAGATTGTTTGTaGCTCCAGCTGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RGRGFNSGRVPSSTITKGRIDCL*LQLRWS
Trigger: TGACCACCTCAGCTGGAGGCACAAACAATCTATCCG...GCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp GACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCGGCTGGCCATTCAGTTaGACTGACCTTTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: DWRDDQCPAGPKGAGLQFGWPFS*TDLSSE
Trigger: TTCAGAAGAAAGGTCAGTGCAACTGAATGGCCAGCC...GAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp GCCCGAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTATTGACTGTCCTGACTaGGTTCTTGGTGCTCACATC +
Preference number: 4 (lower is better)
Translates to: ARRGRGFNSGRVPSSTITIDCPD*VLGAHI
Trigger: GATGTGAGCACCAAGAACCCAGTCAGGACAGTCAAT...AGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp AAAGCCCATGGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGTGGAATAAATCCGGATaGGCTGCAACAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KAHGDWRDDQCPAGPKGAWNKSG*AATGSS
Trigger: TGAAGAGCCTGTTGCAGCCCATCCGGATTTATTCCA...CGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp GGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAACATATAAGCTGGCTCTaGAATAAATCCGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: GDWRDDQCPAGPKGAGLQHISWL*NKSGWA
Trigger: AGCCCATCCGGATTTATTCCAGAGCCAGCTTATATG...TTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp GACATTCTTGACCACATAAAAGCCCATGGTGACTGGAGGGATGACCAATGTCCGCACTCGGCCAGGCCGTaGCTTCCGCTGGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: DILDHIKAHGDWRDDQCPHSARP*LPLEPS
Trigger: GCTGGGCTCCAGCGGAAGCCACGGCCTGGCCGAGTG...CGGACATTGGTCATCCCTCCAGTCACCATGGGCTTTTATGTGGTCAAGAATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp GGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCGACATCTTTGGGTTTTaGACTTTAGGCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GGASILGGSRRPPSLRAGDIFGF*TLGPPA
Trigger: GGCAGGAGGGCCTAAAGTCCAAAACCCAAAGATGTC...GCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp ATAAAAGCCCATGGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGTTCCTGCCACCTTCATaGATCCATCTAGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: IKAHGDWRDDQCPAGPKGFLPPS*IHLGGR
Trigger: TCGCCCTCCTAGATGGATTCATGAAGGTGGCAGGAA...CCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGCTGAGCACAGCCACTaGCCTGGTGCAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGAEHSH*PGAAWS
Trigger: GGACCAGGCTGCACCAGGTCAGTGGCTGTGCTCAGC...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGACCTGTGGAGCCGCTaGGCCTTGTGGCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGDLWSR*ALWLSG
Trigger: CCCACTCAGCCACAAGGCTCAGCGGCTCCACAGGTC...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GCCCGAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTCTTTTCCTTCAAACCTaGAGCTCTGTCTACAGGCAA +
Preference number: 4 (lower is better)
Translates to: ARRGRGFNSGRVPSSTITLFLQT*SSVYRQ
Trigger: TTGCCTGTAGACAGAGCTGCAGGTTTGAAGGAAAAG...AGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp ATAAAAGCCCATGGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGCAGATGCATCTGAGCTaGCTTCTCCCTTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: IKAHGDWRDDQCPAGPKGQMHLS*LLPLEL
Trigger: GAGCTCCAAAGGGAGAAGGCAGCTCAGATGCATCTG...CCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp GGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAAGGTTGTGGTGGTTTGTaGAGTGAGCATAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: GDWRDDQCPAGPKGAGLQGCGGL*SEHKSL
Trigger: TAAGGATTTATGCTCACTGCACAAACCACCACAACC...TTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp ATAAAAGCCCATGGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGAGTTGCTGGAGGGCATaGCTTCAGGGAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: IKAHGDWRDDQCPAGPKGSCWRA*LQGRHK
Trigger: TTTGTGCCTTCCCTGAAGCCATGCCCTCCAGCAACT...CCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp GACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCTGTTCCAGGAGTTATTaGGATTACGACGCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: DWRDDQCPAGPKGAGLQFCSRSY*DYDAVH
Trigger: ATGCACTGCGTCGTAATCCCAATAACTCCTGGAACA...GAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp AAAGCCCATGGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGTCCGATAGTTATTTaGCTCATTACCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KAHGDWRDDQCPAGPKGAGPIVI*LITQFP
Trigger: TGGGAACTGGGTAATGAGCCAAATAACTATCGGACC...CGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGGCACAGCCAAGACTTTaGGGCCGATCAGGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRAQPRL*GRSGAC
Trigger: ACAAGCGCCTGATCGGCCCCAAAGTCTTGGCTGTGC...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGGCCGTGGCTTCCGCTaGAGCCCAGCCACATGCACA +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGGRGFR*SPATCT
Trigger: TGTGCATGTGGCTGGGCTCCAGCGGAAGCCACGGCC...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp TTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACCACTCGGCCAGGCCGTaGCTTCCGCTGGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FLLGVCCQLVFIVHMKGNHSARP*LPLEPS
Trigger: GCTGGGCTCCAGCGGAAGCCACGGCCTGGCCGAGTG...GTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GATGTCTACATTTTCCTTTGGGATGGATGTGGCCTACCTAGGCTAAGATCACGCCACTCGGCCAGGCCGTaGCTTCCGCTGGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: DVYIFLWDGCGLPRLRSRHSARP*LPLEPS
Trigger: GCTGGGCTCCAGCGGAAGCCACGGCCTGGCCGAGTG...GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
3UTR CAA 72 bp CCCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTaGTTATATCAGGGGGCCCTGCAGTCGCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: PQGQALRDLWLL*LYQGALQSHLY
Trigger: GTACAGGTGCGACTGCAGGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCCATTCAGCCAGCCATCATGAATaGTGGACGGATCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ASILGGSRRPPSLRAGHSASHHE*WTDPAA
Trigger: TGCAGCTGGATCCGTCCATCATTCATGATGGCTGGC...TGAATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp TCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCCATTCAGTTGCACTTGCAGCAGGTACTGGTaGACCAGCTTGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SGRVPSSTITKGWPFSCTCSRYW*TSLSLR
Trigger: TCTCAGAGACAAGCTGGTTCACCAGTACCTGCTGCA...AGTGCAACTGAATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp CACTGTCAGGAACCCAGATGCGCACGCTCATACATCAGCCGGGAAATCATACAACCAGCAGGCCAGGGCTaGCACACCCATTACTCCCCT +
Preference number: 4 (lower is better)
Translates to: HCQEPRCARSYISREIIQPAGQG*HTHYSP
Trigger: AGGGGAGTAATGGGTGTGTCAGCCCTGGCCTGCTGG...TTGTATGATTTCCCGGCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGCCTTTCCCAACTGGCTaGCATTTACTGCCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRPFPTG*HLLPGH
Trigger: ATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAAAGG...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp AGCACCCGCTTCCCAGAAGAACTGCCAGTGATGGATGCCACTGTCAGGAACCCACCTTTCCCAACTGGCTaGCATTTACTGCCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: STRFPEELPVMDATVRNPPFPTG*HLLPGH
Trigger: ATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAAAGG...TGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCATGTTGCCAGGTAACTaGATCTACTGTACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GGASILGGSRRPPSLRAGMLPGN*IYCTSC
Trigger: GCAGGAAGTACAGTAGATGCAGTTACCTGGCAACAT...GCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp GGCAGAGAAGAAGGAGTTGGGAGAGGATGGGTTTTTGTAGGTCCACCCAGTTTTCAGCCACTGACCTGGTaGAGCCTGGTCCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GREEGVGRGWVFVGPPSFQPLTW*SLVLGL
Trigger: GAGCCCGAGGACCAGGCTGCACCAGGTCAGTGGCTG...AAAACTGGGTGGACCTACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTTGTTATATCAGGGGGCCCCCCTCTCTCTCCAGTTaGTTCCATGCTGAGCACAGC +
Preference number: 4 (lower is better)
Translates to: PRARLLGTFGYSCYIRGPPSLSS*FHAEHS
Trigger: GCTGTGCTCAGCATGGAAGCAACTGGAGAGAGAGGG...GGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCCATCAATGCCCTGATTaGCCAGCATTCCTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: GGASILGGSRRPPSLRAGHQCPD*PAFLKC
Trigger: ACACTTTAGGAATGCTGGCCAATCAGGGCATTGATG...GCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp GAGGGCAGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGGCCGTGGCTTCCGCTaGAGCCCAGCCACATGCACA +
Preference number: 4 (lower is better)
Translates to: EGSSSSRLRFGFVVIMLCGRGFR*SPATCT
Trigger: TGTGCATGTGGCTGGGCTCCAGCGGAAGCCACGGCC...ACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTGCGGGGCTTCAATTCTaGGAGGGTCCCGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAAAGLQF*EGPVVH
Trigger: GTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGC...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGCGGGGCTTCAATTCTaGGAGGGTCCCGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGAGLQF*EGPVVH
Trigger: GTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGC...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
3UTR CAA 72 bp GACCTGGTGCAGCCTGGTCCTCGGGCTCTCCCTTTCTaGCTCGCTGTAGTACATCTGCTGTATGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: DLVQPGPRALPF*LAVVHLLYAVP
Trigger: AGGAACAGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGGCTGCACCAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGTTCCTGCCACCTTCATaGATCCATCTAGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRFLPPS*IHLGGR
Trigger: TCGCCCTCCTAGATGGATTCATGAAGGTGGCAGGAA...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGGAAGTCGGTCCTTTTaGCCCCGAAGCGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVGSRSF*PRSAER
Trigger: CCTTTCTGCGCTTCGGGGGCAAAAGGACCGACTTCC...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR GCA 90 bp CCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTTGTTATATCAGGGGGCCCCAGATGCATCTGAGCTaGCTTCTCCCTTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PRARLLGTFGYSCYIRGPQMHLS*LLPLEL
Trigger: GAGCTCCAAAGGGAGAAGGCAGCTCAGATGCATCTG...GGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370552.8
CDS-3UTR GCA 90 bp AGCACCCGCTTCCCAGAAGAACTGCCAGTGATGGATGCCACTGTCAGGAACCCAACTGCCAGTGATGGATaGCACTGTCAGGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: STRFPEELPVMDATVRNPTASDG*HCQEPR
Trigger: TCTGGGTTCCTGACAGTGGCATCCATCACTGGCAGT...TGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp AGCACCCGCTTCCCAGAAGAACTGCCAGTGATGGATGCCACTGTCAGGAACCCAATCCTTAACTCCGTGTaGGTCTTAGGCAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: STRFPEELPVMDATVRNPILNSV*VLGSLP
Trigger: AGGGAGGCTGCCTAAGACGCACACGGAGTTAAGGAT...TGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGCAGCCACTGACCTGGTaGAGCCTGGTCCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SSSSRLRFGFVVIMLCDRQPLTW*SLVLGL
Trigger: GAGCCCGAGGACCAGGCTGCACCAGGTCAGTGGCTG...CCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTACCCATTTCCCCGGGTaGCCCTGGGCGAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: GSVLSARFHSAHEGKHSATHFPG*PWASHG
Trigger: TCCATGGCTCGCCCAGGGGCACCCGGGGAAATGGGT...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATGGCCGTGGCTTCCGCTaGAGCCCAGCCACATGCACA +
Preference number: 4 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHGRGFR*SPATCT
Trigger: TGTGCATGTGGCTGGGCTCCAGCGGAAGCCACGGCC...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGGGCCGTGGCTTCCGCTaGAGCCCAGCCACATGCACA +
Preference number: 4 (lower is better)
Translates to: NISPGSVLSARFHSAHEGGRGFR*SPATCT
Trigger: TGTGCATGTGGCTGGGCTCCAGCGGAAGCCACGGCC...CCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGCACTCGGCCAGGCCGTaGCTTCCGCTGGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RFGFVVIMLCDRIMGSCLHSARP*LPLEPS
Trigger: GCTGGGCTCCAGCGGAAGCCACGGCCTGGCCGAGTG...CAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTTGTTATATCAGGGGGCCCAAAGCCCATGGTGACTaGAGGGATGACCAATGTCCG +
Preference number: 4 (lower is better)
Translates to: PRARLLGTFGYSCYIRGPKAHGD*RDDQCP
Trigger: CGGACATTGGTCATCCCTCCAGTCACCATGGGCTTT...GGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGTTGATTCCAGCAGGATaGGGCAGCAGGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVLIPAG*GSRGWL
Trigger: CAACCAGCCCCTGCTGCCCCATCCTGCTGGAATCAA...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp AAGACCCTCATGCCCCTTGAATCATATAGAACGTCCTCATCCCCCACTTCACACCATCTAGGAGGGCGATaGCATTCTTCCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: KTLMPLESYRTSSSPTSHHLGGR*HSSSAA
Trigger: GGCGGCCGAGGAAGAATGTCATCGCCCTCCTAGATG...GTGTGAAGTGGGGGATGAGGACGTTCTATATGATTCAAGGGGCATGAGGGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGGTTTGTGCCTCCAGCTaGGGTGGTCACCACACCTTC +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEEVCASS*GGHHTF
Trigger: GAAGGTGTGGTGACCACCTCAGCTGGAGGCACAAAC...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp CCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGCTGTAGTACATCTGCTGTATGCTTGCAGCAGGTACTGGTaGACCAGCTTGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PGPRALPFLLAVVHLLYACSRYW*TSLSLR
Trigger: TCTCAGAGACAAGCTGGTTCACCAGTACCTGCTGCA...AGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp CCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGCTGTAGTACATCTGCTGTATGCTCAGAAGAACTGCCAGTaGTGGATGCCACTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: PGPRALPFLLAVVHLLYAQKNCQ*WMPLSG
Trigger: TCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTG...AGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp TCTGGAAACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGCTGAGCACAGCCACTaGCCTGGTGCAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SGNISPGSVLSARFHSAHAEHSH*PGAAWS
Trigger: GGACCAGGCTGCACCAGGTCAGTGGCTGTGCTCAGC...ATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AGCACCCGCTTCCCAGAAGAACTGCCAGTGATGGATGCCACTGTCAGGAACCCAGAACCTACAAAGATGTaGAGGAGGTGTCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: STRFPEELPVMDATVRNPEPTKM*RRCLDL
Trigger: CAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTC...TGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GGCAGAGAAGAAGGAGTTGGGAGAGGATGGGTTTTTGTAGGTCCACCCAGTTTTCTGGCTGCCATTTACTaGCCGGCCATGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: GREEGVGRGWVFVGPPSFLAAIY*PAMHGP
Trigger: CGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAG...AAAACTGGGTGGACCTACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGATGGAGCCCAGCCACATaGACAGCCAAGACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGWSPAT*TAKTLG
Trigger: CCCCAAAGTCTTGGCTGTGCATGTGGCTGGGCTCCA...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR GCA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGGGCTGGCCATTCAGTTaGACTGACTTGGACTTTAGG +
Preference number: 4 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRGWPFS*TDLDFR
Trigger: CCTAAAGTCCAAGTCAGTGCAACTGAATGGCCAGCC...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGCCTTCTGGGCAGCCTTaGAGGGCGGTCTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SSSSRLRFGFVVIMLCDRPSGQP*RAVSGS
Trigger: AGACCCTGAGACCGCCCTGCAAGGCTGCCCAGAAGG...CCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGGGTTCCTCAGGTTCTaGAACTGCAGGAAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVGFLRF*NCRKSV
Trigger: GACCGACTTCCTGCAGTTCCAGAACCTGAGGAACCC...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR CCA 90 bp GGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCCATTCATAACATCAGGGTGCTaGGCAATCTTGCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GFNSGRVPSSTITKGWPFITSGC*AILQPF
Trigger: GAAAGGCTGCAAGATTGCCCAGCACCCTGATGTTAT...GAATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp GGGGGCCCTGCAGTCGCACCTGTACCAGTATGTAGAAGAGACGTTGATATCTGCCTGCCCGGCCATGCATaGTCCGATAGTTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: GGPAVAPVPVCRRDVDICLPGHA*SDSYLA
Trigger: AGCCAAATAACTATCGGACCATGCATGGCCGGGCAG...GCAGATATCAACGTCTCTTCTACATACTGGTACAGGTGCGACTGCAGGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGTGCCTCCAGCTGAGGTaGTCACCACACCTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEECLQLR*SPHLQA
Trigger: GGCTTGAAGGTGTGGTGACCACCTCAGCTGGAGGCA...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGGCACAGCCAAGACTTTaGGGCCGATCAGGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEEAQPRL*GRSGAC
Trigger: ACAAGCGCCTGATCGGCCCCAAAGTCTTGGCTGTGC...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp CCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTTGTTATATCAGGGGGCCCACCATCACTAAGGGCTaGCCATTCAGTTGCACTGAC +
Preference number: 4 (lower is better)
Translates to: PRARLLGTFGYSCYIRGPTITKG*PFSCTD
Trigger: GTCAGTGCAACTGAATGGCCAGCCCTTAGTGATGGT...GGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTGCGGGGCTTCAATTCTaGGAGGGTCCCGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: GSVLSARFHSAHEGKHSAAGLQF*EGPVVH
Trigger: GTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGC...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTTGTTATATCAGGGGGCCCTGGAAACATTTCTCCTaGGAGTGTGCTGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PRARLLGTFGYSCYIRGPWKHFS*ECAVSS
Trigger: CGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCA...GGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGTGTGAAGGAGGTGTCTaGACCTGTGGAGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: SRGWLLGCLKTEDTTGVECEGGV*TCGAAE
Trigger: CTCAGCGGCTCCACAGGTCCAGACACCTCCTTCACA...CTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTTCGAGCCAGCCATCATaGATGATGGACGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAASSQPS*MMDGSS
Trigger: GCTGGATCCGTCCATCATTCATGATGGCTGGCTCGA...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370552.8
CDS-3UTR TCA 90 bp CAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGATCGAGCCAGCCATCATaGATGATGGACGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: QQGLVARMSENRGYYWSGSSQPS*MMDGSS
Trigger: GCTGGATCCGTCCATCATTCATGATGGCTGGCTCGA...TCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR TCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGGGAAGTCCATCACCTTaGCCACCCGGCCATCAATGT +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEEGSPSP*PPGHQC
Trigger: ACATTGATGGCCGGGTGGTCAAGGTGATGGACTTCC...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp CACTGTCAGGAACCCAGATGCGCACGCTCATACATCAGCCGGGAAATCATACAAGGAAGTCCATCACCTTaGCCACCCGGCCATCAATGT +
Preference number: 4 (lower is better)
Translates to: HCQEPRCARSYISREIIQGSPSP*PPGHQC
Trigger: ACATTGATGGCCGGGTGGTCAAGGTGATGGACTTCC...TTGTATGATTTCCCGGCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGGAAGTCCATCACCTTaGCCACCCGGCCATCAATGT +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGGSPSP*PPGHQC
Trigger: ACATTGATGGCCGGGTGGTCAAGGTGATGGACTTCC...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp GCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCCATTCAACGACATCAATGCCCTaGTTGGCCAGCATTCCTAAA +
Preference number: 4 (lower is better)
Translates to: ASILGGSRRPPSLRAGHSTTSMP*LASIPK
Trigger: TTTAGGAATGCTGGCCAATCAGGGCATTGATGTCGT...TGAATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGTGCAGCAGGTACTGGTaGACCAGCTTGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVCSRYW*TSLSLR
Trigger: TCTCAGAGACAAGCTGGTTCACCAGTACCTGCTGCA...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp GATGTCTACATTTTCCTTTGGGATGGATGTGGCCTACCTAGGCTAAGATCACGCGCTGAGCCTTGTGGCTaGGTGGGCAGGCTCTGGATT +
Preference number: 4 (lower is better)
Translates to: DVYIFLWDGCGLPRLRSRAEPCG*VGRLWI
Trigger: AATCCAGAGCCTGCCCACTCAGCCACAAGGCTCAGC...GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp ATAAAAGCCCATGGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGATGATCCCACAGTATTaGCATCTTTGGGTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: IKAHGDWRDDQCPAGPKGMIPQY*HLWVLD
Trigger: GTCCAAAACCCAAAGATGTCAATACTGTGGGATCAT...CCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp CAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGACCTTTCCCAACTGGCTaGCATTTACTGCCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: QQGLVARMSENRGYYWSGPFPTG*HLLPGH
Trigger: ATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAAAGG...TCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR GCA 90 bp TCGGTAGCGGCAGGCCAAAGCATTGACATTCTTGACCACATAAAAGCCCATGGTTGGAGCCCAGCCACATaGACAGCCAAGACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SVAAGQSIDILDHIKAHGWSPAT*TAKTLG
Trigger: CCCCAAAGTCTTGGCTGTGCATGTGGCTGGGCTCCA...ACCATGGGCTTTTATGTGGTCAAGAATGTCAATGCTTTGGCCTGCCGCTACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp AAGACCCTCATGCCCCTTGAATCATATAGAACGTCCTCATCCCCCACTTCACACAGCCTCCCTAGTCTCTaGCCTAGGCAACCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: KTLMPLESYRTSSSPTSHSLPSL*PRQPCL
Trigger: AAGGCAGGGTTGCCTAGGGCAGAGACTAGGGAGGCT...GTGTGAAGTGGGGGATGAGGACGTTCTATATGATTCAAGGGGCATGAGGGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTTATATCAGGGGGCCCTaGAGTCGCACCTGTACCAGT +
Preference number: 4 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAAYIRGP*SRTCTS
Trigger: ACTGGTACAGGTGCGACTGCAGGGCCCCCTGATATA...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGAGTTGCTGGAGGGCATaGCTTCAGGGAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVSCWRA*LQGRHK
Trigger: TTTGTGCCTTCCCTGAAGCCATGCCCTCCAGCAACT...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR CCA 90 bp GGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCCATTGTTGTACTTTTTGCTaGCGCTGTACTTCAACAGAC +
Preference number: 4 (lower is better)
Translates to: GASILGGSRRPPSLRAGHCCTFC*RCTSTD
Trigger: GTCTGTTGAAGTACAGCGCCAGCAAAAAGTACAACA...ATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGCTGCCCGGCCATGCATaGTCCGATAGTTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVLPGHA*SDSYLA
Trigger: AGCCAAATAACTATCGGACCATGCATGGCCGGGCAG...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp GAGGGCAGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGCACAGCCAAGACTTTaGGGCCGATCAGGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: EGSSSSRLRFGFVVIMLCAQPRL*GRSGAC
Trigger: ACAAGCGCCTGATCGGCCCCAAAGTCTTGGCTGTGC...ACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGTGGGGCAGCAGGGGCTaGTTGCTAGGATGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: SRGWLLGCLKTEDTTGVEWGSRG*LLGCLK
Trigger: TTTCAGACATCCTAGCAACCAGCCCCTGCTGCCCCA...CTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGTGGGGCAGCAGGGGCTaGTTGCTAGGATGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEEWGSRG*LLGCLK
Trigger: TTTCAGACATCCTAGCAACCAGCCCCTGCTGCCCCA...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp GAGGGCAGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTTCGAGCCAGCCATCATaGATGATGGACGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: EGSSSSRLRFGFVVIMLCSSQPS*MMDGSS
Trigger: GCTGGATCCGTCCATCATTCATGATGGCTGGCTCGA...ACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCTGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR TCA 90 bp GGGGGCCCTGCAGTCGCACCTGTACCAGTATGTAGAAGAGACGTTGATATCTGCCATCCTCATAGTTTTTaGGATAGTAATCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GGPAVAPVPVCRRDVDICHPHSF*DSNPGP
Trigger: CGGGCCCGGATTACTATCTCAAAAACTATGAGGATG...GCAGATATCAACGTCTCTTCTACATACTGGTACAGGTGCGACTGCAGGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370552.8
CDS-3UTR TCA 90 bp GAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGACCTGGCTGTTAATATaGGATTACTGTAAGTATTGG +
Preference number: 4 (lower is better)
Translates to: EGGGASILGGSRRPPSLRTWLLI*DYCKYW
Trigger: CCAATACTTACAGTAATCTCATATTAACAGCCAGGT...CCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGATTCCTGCCACCTTCATaGATCCATCTAGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGFLPPS*IHLGGR
Trigger: TCGCCCTCCTAGATGGATTCATGAAGGTGGCAGGAA...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp GATGTCTACATTTTCCTTTGGGATGGATGTGGCCTACCTAGGCTAAGATCACGCGTTTGTGCCTCCAGCTaGGGTGGTCACCACACCTTC +
Preference number: 4 (lower is better)
Translates to: DVYIFLWDGCGLPRLRSRVCASS*GGHHTF
Trigger: GAAGGTGTGGTGACCACCTCAGCTGGAGGCACAAAC...GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATGTTTGTGCCTCCAGCTaGGGTGGTCACCACACCTTC +
Preference number: 4 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHVCASS*GGHHTF
Trigger: GAAGGTGTGGTGACCACCTCAGCTGGAGGCACAAAC...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCCATTCATTCTGGTCCACGAGGTaGTTGTATCCATGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: ASILGGSRRPPSLRAGHSFWSTR*LYPWSK
Trigger: TTTTGACCATGGATACAATCACCTCGTGGACCAGAA...TGAATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAAGAGCAAGTCTGTGTTaGTTCCAGCAGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGRASLC*FQQDGA
Trigger: TGCCCCATCCTGCTGGAATCAACACAGACTTGCTCT...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp CAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGACAGAAGAACTGCCAGTaGTGGATGCCACTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: QQGLVARMSENRGYYWSGQKNCQ*WMPLSG
Trigger: TCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTG...TCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGGCTGAGCCTTGTGGCTaGGTGGGCAGGCTCTGGATT +
Preference number: 4 (lower is better)
Translates to: SRLRFGFVVIMLCDRIMGAEPCG*VGRLWI
Trigger: AATCCAGAGCCTGCCCACTCAGCCACAAGGCTCAGC...CCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGTACAGAAAGTGTGTTTaGGTGGAGTTCTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRYRKCV*VEFWLF
Trigger: GAACAGCCAGAACTCCACTCAAACACACTTTCTGTA...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGAGCATAACATCAGGGTaGTGGGCAATCTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVSITSG*WAILQP
Trigger: AGGCTGCAAGATTGCCCAGCACCCTGATGTTATGCT...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR GCA 90 bp TCTGGAAACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATCTGGCTGCCATTTACTaGCCGGCCATGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: SGNISPGSVLSARFHSAHLAAIY*PAMHGP
Trigger: CGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAG...ATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp AGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGCTGGCTGCCATTTACTaGCCGGCCATGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: SRLRFGFVVIMLCDRIMGLAAIY*PAMHGP
Trigger: CGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAG...CCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp TCGGTAGCGGCAGGCCAAAGCATTGACATTCTTGACCACATAAAAGCCCATGGTCCTTTCCCAACTGGCTaGCATTTACTGCCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: SVAAGQSIDILDHIKAHGPFPTG*HLLPGH
Trigger: ATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAAAGG...ACCATGGGCTTTTATGTGGTCAAGAATGTCAATGCTTTGGCCTGCCGCTACCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp GAGGGCAGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTCCTTTCCCAACTGGCTaGCATTTACTGCCCGGCCAT +
Preference number: 4 (lower is better)
Translates to: EGSSSSRLRFGFVVIMLCPFPTG*HLLPGH
Trigger: ATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAAAGG...ACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCTGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CACTGTCAGGAACCCAGATGCGCACGCTCATACATCAGCCGGGAAATCATACAATGTCAGGAACCCAGATaGGCACGCTCATACATCAGC +
Preference number: 4 (lower is better)
Translates to: HCQEPRCARSYISREIIQCQEPR*ARSYIS
Trigger: GCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACA...TTGTATGATTTCCCGGCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCCATTCAAGAGCAAATATCAGGTaGAGTCCAGAGCAATCAGCA +
Preference number: 4 (lower is better)
Translates to: ASILGGSRRPPSLRAGHSRANIR*SPEQSA
Trigger: TGCTGATTGCTCTGGACTCCACCTGATATTTGCTCT...TGAATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTGCCTCCAGCTGAGGTaGTCACCACACCTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHCLQLR*SPHLQA
Trigger: GGCTTGAAGGTGTGGTGACCACCTCAGCTGGAGGCA...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTTGCCTCCAGCTGAGGTaGTCACCACACCTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: GSVLSARFHSAHEGKHSACLQLR*SPHLQA
Trigger: GGCTTGAAGGTGTGGTGACCACCTCAGCTGGAGGCA...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAAAAGCCCATGGTGACTaGAGGGATGACCAATGTCCG +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGKAHGD*RDDQCP
Trigger: CGGACATTGGTCATCCCTCCAGTCACCATGGGCTTT...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp CAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAAGGATACTACTGGAGTaGAGGAGTGGAAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QQGLVARMSENRGYYWSGRILLE*RSGSSP
Trigger: TGGGCTGCTTCCACTCCTCCACTCCAGTAGTATCCT...TCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAAGGATACTACTGGAGTaGAGGAGTGGAAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGRILLE*RSGSSP
Trigger: TGGGCTGCTTCCACTCCTCCACTCCAGTAGTATCCT...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp AACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGTTGATTCCAGCAGGATaGGGCAGCAGGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: NISPGSVLSARFHSAHEGLIPAG*GSRGWL
Trigger: CAACCAGCCCCTGCTGCCCCATCCTGCTGGAATCAA...CCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CACTGTCAGGAACCCAGATGCGCACGCTCATACATCAGCCGGGAAATCATACAAGGAGTTGGGAGAGGATaGGTTTTTGTAGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: HCQEPRCARSYISREIIQGVGRG*VFVGPP
Trigger: GGGTGGACCTACAAAAACCCATCCTCTCCCAACTCC...TTGTATGATTTCCCGGCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTGGAGTTGGGAGAGGATaGGTTTTTGTAGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAAGVGRG*VFVGPP
Trigger: GGGTGGACCTACAAAAACCCATCCTCTCCCAACTCC...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGTCAGCTGTAGCTCATTaGCAAAGACCCTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEESAVAH*QRPSCP
Trigger: GGGGCATGAGGGTCTTTGCCAATGAGCTACAGCTGA...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGCTGTAGTACATCTGCTGTATGCTCTCACTTTGCAGACTTaGCCCAAATCCTTAACTCCG +
Preference number: 4 (lower is better)
Translates to: PGPRALPFLLAVVHLLYALTLQT*PKSLTP
Trigger: CGGAGTTAAGGATTTGGGCCAAGTCTGCAAAGTGAG...AGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATGAAACGGGTCCCTTCTaGGCAGCCTTGCAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDETGPF*AALQGG
Trigger: ACCGCCCTGCAAGGCTGCCCAGAAGGGACCCGTTTC...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp TTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACGGAAGTCCATCACCTTaGCCACCCGGCCATCAATGT +
Preference number: 4 (lower is better)
Translates to: FLLGVCCQLVFIVHMKGNGSPSP*PPGHQC
Trigger: ACATTGATGGCCGGGTGGTCAAGGTGATGGACTTCC...GTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AGCACCCGCTTCCCAGAAGAACTGCCAGTGATGGATGCCACTGTCAGGAACCCACTGCTCTCCACTCAATaGATATTGTTACTTGACTCC +
Preference number: 4 (lower is better)
Translates to: STRFPEELPVMDATVRNPLLSTQ*ILLLDS
Trigger: GGAGTCAAGTAACAATATTCATTGAGTGGAGAGCAG...TGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp CCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGCTGTAGTACATCTGCTGTATGCTGAGTTCTGGCTGTTCTaGATGAGCAGAACCTACAAA +
Preference number: 4 (lower is better)
Translates to: PGPRALPFLLAVVHLLYAEFWLF*MSRTYK
Trigger: TTTGTAGGTTCTGCTCATTCAGAACAGCCAGAACTC...AGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGACTCAGGTTCTGGAACTaGAGGAAGTCGGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: QQGLVARMSENRGYYWSGLRFWN*RKSVLL
Trigger: CAAAAGGACCGACTTCCTGCAGTTCCAGAACCTGAG...TCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR GCA 90 bp AGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGCTCAGGTTCTGGAACTaGAGGAAGTCGGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SRGWLLGCLKTEDTTGVELRFWN*RKSVLL
Trigger: CAAAAGGACCGACTTCCTGCAGTTCCAGAACCTGAG...CTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR GCA 90 bp CAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGACGGATAGATTGTTTGTaGCTCCAGCTGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: QQGLVARMSENRGYYWSGRIDCL*LQLRWS
Trigger: TGACCACCTCAGCTGGAGGCACAAACAATCTATCCG...TCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR GCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGGGCTGGCCATTCAGTTaGACTGACTTGGACTTTAGG +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEEGWPFS*TDLDFR
Trigger: CCTAAAGTCCAAGTCAGTGCAACTGAATGGCCAGCC...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR GCA 90 bp GGCAGAGAAGAAGGAGTTGGGAGAGGATGGGTTTTTGTAGGTCCACCCAGTTTTACTGCCAGTGATGGATaGCACTGTCAGGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: GREEGVGRGWVFVGPPSFTASDG*HCQEPR
Trigger: TCTGGGTTCCTGACAGTGGCATCCATCACTGGCAGT...AAAACTGGGTGGACCTACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp TTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACCCCTCTCTCTCCAGTTaGTTCCATGCTGAGCACAGC +
Preference number: 4 (lower is better)
Translates to: FLLGVCCQLVFIVHMKGNPSLSS*FHAEHS
Trigger: GCTGTGCTCAGCATGGAAGCAACTGGAGAGAGAGGG...GTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGGGGTCACCAAGCGCTTaGAGCTTAGGAAATCGAGCC +
Preference number: 4 (lower is better)
Translates to: NISPGSVLSARFHSAHEGGSPSA*SLGNRA
Trigger: GGCTCGATTTCCTAAGCTCCAAGCGCTTGGTGACCC...CCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CCA 90 bp AGCACCCGCTTCCCAGAAGAACTGCCAGTGATGGATGCCACTGTCAGGAACCCATGTTGTACTTTTTGCTaGCGCTGTACTTCAACAGAC +
Preference number: 4 (lower is better)
Translates to: STRFPEELPVMDATVRNPCCTFC*RCTSTD
Trigger: GTCTGTTGAAGTACAGCGCCAGCAAAAAGTACAACA...TGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGTGGAATAAATCCGGATaGGCTGCAACAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVWNKSG*AATGSS
Trigger: TGAAGAGCCTGTTGCAGCCCATCCGGATTTATTCCA...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp CCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGCTGTAGTACATCTGCTGTATGCTCATATAAGCTGGCTCTaGAATAAATCCGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: PGPRALPFLLAVVHLLYAHISWL*NKSGWA
Trigger: AGCCCATCCGGATTTATTCCAGAGCCAGCTTATATG...AGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GAGGGCAGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTTCAGTTGCACTGACTTaGACTTTAGGCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: EGSSSSRLRFGFVVIMLCSVALT*TLGPPA
Trigger: GGCAGGAGGGCCTAAAGTCCAAGTCAGTGCAACTGA...ACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCTGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGACCATCACTAAGGGCTaGCCATTCAGTTGCACTGAC +
Preference number: 4 (lower is better)
Translates to: SRGWLLGCLKTEDTTGVETITKG*PFSCTD
Trigger: GTCAGTGCAACTGAATGGCCAGCCCTTAGTGATGGT...CTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp GAGGGCAGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTAGGATACTACTGGAGTaGAGGAGTGGAAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: EGSSSSRLRFGFVVIMLCRILLE*RSGSSP
Trigger: TGGGCTGCTTCCACTCCTCCACTCCAGTAGTATCCT...ACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCTGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATGAGCTGAAGCCTCAGTaGGAGGTGCCTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDELKPQ*EVPGPR
Trigger: TCTGGGACCAGGCACCTCCCACTGAGGCTTCAGCTC...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCTGTGAAGGAGGTGTCTaGACCTGTGGAGCCGCTGAG +
Preference number: 4 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTCEGGV*TCGAAE
Trigger: CTCAGCGGCTCCACAGGTCCAGACACCTCCTTCACA...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGCATCCTCATAGTTTTTaGGATAGTAATCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SRGWLLGCLKTEDTTGVEHPHSF*DSNPGP
Trigger: CGGGCCCGGATTACTATCTCAAAAACTATGAGGATG...CTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR TCA 90 bp AACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGTTCCTGCCACCTTCATaGATCCATCTAGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: NISPGSVLSARFHSAHEGFLPPS*IHLGGR
Trigger: TCGCCCTCCTAGATGGATTCATGAAGGTGGCAGGAA...CCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp CAAAGCATTGACATTCTTGACCACATAAAAGCCCATGGTGACTGGAGGGATGACGGAAGTCCATCACCTTaGCCACCCGGCCATCAATGT +
Preference number: 4 (lower is better)
Translates to: QSIDILDHIKAHGDWRDDGSPSP*PPGHQC
Trigger: ACATTGATGGCCGGGTGGTCAAGGTGATGGACTTCC...GTCATCCCTCCAGTCACCATGGGCTTTTATGTGGTCAAGAATGTCAATGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp GATGTCTACATTTTCCTTTGGGATGGATGTGGCCTACCTAGGCTAAGATCACGCTGCAGCAGGTACTGGTaGACCAGCTTGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: DVYIFLWDGCGLPRLRSRCSRYW*TSLSLR
Trigger: TCTCAGAGACAAGCTGGTTCACCAGTACCTGCTGCA...GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp TTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACAGAGCAAGTCTGTGTTaGTTCCAGCAGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: FLLGVCCQLVFIVHMKGNRASLC*FQQDGA
Trigger: TGCCCCATCCTGCTGGAATCAACACAGACTTGCTCT...GTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATAGAGCAAGTCTGTGTTaGTTCCAGCAGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHRASLC*FQQDGA
Trigger: TGCCCCATCCTGCTGGAATCAACACAGACTTGCTCT...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGGTTATAATGCTGTGTaGCAGGATCATGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGGYNAV*QDHGEL
Trigger: CAACTCCCCATGATCCTGTCACACAGCATTATAACC...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATCCAGCAGGCCAGGGCTaGCACACCCATTACTCCCCT +
Preference number: 4 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHPAGQG*HTHYSP
Trigger: AGGGGAGTAATGGGTGTGTCAGCCCTGGCCTGCTGG...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGCTTTTCCTTCAAACCTaGAGCTCTGTCTACAGGCAA +
Preference number: 4 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVLFLQT*SSVYRQ
Trigger: TTGCCTGTAGACAGAGCTGCAGGTTTGAAGGAAAAG...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR GCA 90 bp GAGGGCAGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTCGGATAGATTGTTTGTaGCTCCAGCTGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: EGSSSSRLRFGFVVIMLCRIDCL*LQLRWS
Trigger: TGACCACCTCAGCTGGAGGCACAAACAATCTATCCG...ACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCTGCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp AGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGTGGAGCCCAGCCACATaGACAGCCAAGACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: RFGFVVIMLCDRIMGSCLWSPAT*TAKTLG
Trigger: CCCCAAAGTCTTGGCTGTGCATGTGGCTGGGCTCCA...CAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACAGTTGCTGGAGGGCATaGCTTCAGGGAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: FLLGVCCQLVFIVHMKGNSCWRA*LQGRHK
Trigger: TTTGTGCCTTCCCTGAAGCCATGCCCTCCAGCAACT...GTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CCA 90 bp AACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAGTTGCTGGAGGGCATaGCTTCAGGGAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: NISPGSVLSARFHSAHEGSCWRA*LQGRHK
Trigger: TTTGTGCCTTCCCTGAAGCCATGCCCTCCAGCAACT...CCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGATTGACTGTCCTGACTaGGTTCTTGGTGCTCACATC +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEEIDCPD*VLGAHI
Trigger: GATGTGAGCACCAAGAACCCAGTCAGGACAGTCAAT...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR CCA 90 bp CAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAATAACATCAGGGTGCTaGGCAATCTTGCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: QQGLVARMSENRGYYWSGITSGC*AILQPF
Trigger: GAAAGGCTGCAAGATTGCCCAGCACCCTGATGTTAT...TCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CCA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGCATCAATGCCCTGATTaGCCAGCATTCCTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVHQCPD*PAFLKC
Trigger: ACACTTTAGGAATGCTGGCCAATCAGGGCATTGATG...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp GGCCAAAGCATTGACATTCTTGACCACATAAAAGCCCATGGTGACTGGAGGGATAAAGCCCATGGTGACTaGAGGGATGACCAATGTCCG +
Preference number: 4 (lower is better)
Translates to: GQSIDILDHIKAHGDWRDKAHGD*RDDQCP
Trigger: CGGACATTGGTCATCCCTCCAGTCACCATGGGCTTT...ATCCCTCCAGTCACCATGGGCTTTTATGTGGTCAAGAATGTCAATGCTTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAAACAGAGGATACTACTaGAGTGGAGGAGTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGNRGYY*SGGVEA
Trigger: TGCTTCCACTCCTCCACTCCAGTAGTATCCTCTGTT...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGACTCACTTTGCAGACTTaGCCCAAATCCTTAACTCCG +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGLTLQT*PKSLTP
Trigger: CGGAGTTAAGGATTTGGGCCAAGTCTGCAAAGTGAG...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CAA 72 bp TCAGCTGTAGCTCATTGGCAAAGACCCTCATGCCCCTaGAATCATATAGAACGTCCTCATCCCCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: SAVAHWQRPSCP*NHIERPHPPLH
Trigger: GTGAAGTGGGGGATGAGGACGTTCTATATGATTCAAGGGGCATGAGGGTCTTTGCCAATGAGCTACAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp CCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTTGTTATATCAGGGGGCCCACCTGGCTGTTAATATaGGATTACTGTAAGTATTGG +
Preference number: 4 (lower is better)
Translates to: PRARLLGTFGYSCYIRGPTWLLI*DYCKYW
Trigger: CCAATACTTACAGTAATCTCATATTAACAGCCAGGT...GGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370552.8
CDS-3UTR TCA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTCATCTAGGAGGGCGATaGCATTCTTCCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFHLGGR*HSSSAA
Trigger: GGCGGCCGAGGAAGAATGTCATCGCCCTCCTAGATG...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGTTCTGGTCCACGAGGTaGTTGTATCCATGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: SRGWLLGCLKTEDTTGVEFWSTR*LYPWSK
Trigger: TTTTGACCATGGATACAATCACCTCGTGGACCAGAA...CTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp CAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGATTCTGGTCCACGAGGTaGTTGTATCCATGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: QQGLVARMSENRGYYWSGFWSTR*LYPWSK
Trigger: TTTTGACCATGGATACAATCACCTCGTGGACCAGAA...TCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp CACTGTCAGGAACCCAGATGCGCACGCTCATACATCAGCCGGGAAATCATACAAGAGTTCTGGCTGTTCTaGATGAGCAGAACCTACAAA +
Preference number: 4 (lower is better)
Translates to: HCQEPRCARSYISREIIQEFWLF*MSRTYK
Trigger: TTTGTAGGTTCTGCTCATTCAGAACAGCCAGAACTC...TTGTATGATTTCCCGGCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGACTTTTCCTTCAAACCTaGAGCTCTGTCTACAGGCAA +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGLFLQT*SSVYRQ
Trigger: TTGCCTGTAGACAGAGCTGCAGGTTTGAAGGAAAAG...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR GCA 90 bp CACTGTCAGGAACCCAGATGCGCACGCTCATACATCAGCCGGGAAATCATACAACTTTTCCTTCAAACCTaGAGCTCTGTCTACAGGCAA +
Preference number: 4 (lower is better)
Translates to: HCQEPRCARSYISREIIQLFLQT*SSVYRQ
Trigger: TTGCCTGTAGACAGAGCTGCAGGTTTGAAGGAAAAG...TTGTATGATTTCCCGGCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370552.8
CDS-3UTR GCA 90 bp AACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAGCATAACATCAGGGTaGTGGGCAATCTTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: NISPGSVLSARFHSAHEGSITSG*WAILQP
Trigger: AGGCTGCAAGATTGCCCAGCACCCTGATGTTATGCT...CCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR GCA 90 bp GCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCCATTCAAAATGTTGTACTTTTTaGTGGCGCTGTACTTCAACA +
Preference number: 4 (lower is better)
Translates to: ASILGGSRRPPSLRAGHSKCCTF*WRCTST
Trigger: TGTTGAAGTACAGCGCCAGCAAAAAGTACAACATTT...TGAATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR GCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGATGTTGCCAGGTAACTaGATCTACTGTACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEEMLPGN*IYCTSC
Trigger: GCAGGAAGTACAGTAGATGCAGTTACCTGGCAACAT...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR GCA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTGGCTGGCCATTCAGTTaGACTGACTTGGACTTTAGG +
Preference number: 4 (lower is better)
Translates to: GSVLSARFHSAHEGKHSAGWPFS*TDLDFR
Trigger: CCTAAAGTCCAAGTCAGTGCAACTGAATGGCCAGCC...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp TCTGGAAACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATTGTCAGGAACCCAGATaGGCACGCTCATACATCAGC +
Preference number: 4 (lower is better)
Translates to: SGNISPGSVLSARFHSAHCQEPR*ARSYIS
Trigger: GCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACA...ATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATGGGTTCCTCAGGTTCTaGAACTGCAGGAAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDGFLRF*NCRKSV
Trigger: GACCGACTTCCTGCAGTTCCAGAACCTGAGGAACCC...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370552.8
CDS-3UTR CCA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTGCTGCCTTCTCCCTTTaGAGCTCCAGCATAACATCA +
Preference number: 4 (lower is better)
Translates to: GSVLSARFHSAHEGKHSAAAFSL*SSSITS
Trigger: TGATGTTATGCTGGAGCTCCAAAGGGAGAAGGCAGC...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CCA 90 bp TTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACGCTGCCTTCTCCCTTTaGAGCTCCAGCATAACATCA +
Preference number: 4 (lower is better)
Translates to: FLLGVCCQLVFIVHMKGNAAFSL*SSSITS
Trigger: TGATGTTATGCTGGAGCTCCAAAGGGAGAAGGCAGC...GTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CCA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTAGAGCAAATATCAGGTaGAGTCCAGAGCAATCAGCA +
Preference number: 4 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAARANIR*SPEQSA
Trigger: TGCTGATTGCTCTGGACTCCACCTGATATTTGCTCT...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CACTGTCAGGAACCCAGATGCGCACGCTCATACATCAGCCGGGAAATCATACAATGTTCCAGGAGTTATTaGGATTACGACGCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: HCQEPRCARSYISREIIQCSRSY*DYDAVH
Trigger: ATGCACTGCGTCGTAATCCCAATAACTCCTGGAACA...TTGTATGATTTCCCGGCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGAGCGGGGCTTCAATTCTaGGAGGGTCCCGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGAGLQF*EGPVVH
Trigger: GTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGC...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp AGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGGATACTACTGGAGTaGAGGAGTGGAAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SRLRFGFVVIMLCDRIMGRILLE*RSGSSP
Trigger: TGGGCTGCTTCCACTCCTCCACTCCAGTAGTATCCT...CCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AAGACCCTCATGCCCCTTGAATCATATAGAACGTCCTCATCCCCCACTTCACACAACAGAGGATACTACTaGAGTGGAGGAGTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KTLMPLESYRTSSSPTSHNRGYY*SGGVEA
Trigger: TGCTTCCACTCCTCCACTCCAGTAGTATCCTCTGTT...GTGTGAAGTGGGGGATGAGGACGTTCTATATGATTCAAGGGGCATGAGGGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGGAAACATGGGGCAGCAGGGGCTaGTTGCTAGGATGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: GFVVIMLCDRIMGSCLETWGSRG*LLGCLK
Trigger: TTTCAGACATCCTAGCAACCAGCCCCTGCTGCCCCA...TGTTTCCAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTGGAAACATTTCTCCTaGGAGTGTGCTGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHWKHFS*ECAVSS
Trigger: CGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCA...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGAGAAACGGGTCCCTTCTaGGCAGCCTTGCAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGETGPF*AALQGG
Trigger: ACCGCCCTGCAAGGCTGCCCAGAAGGGACCCGTTTC...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAAACCTCTCTTCCTACTaGGTCTCGCTAGTGACTAAT +
Preference number: 4 (lower is better)
Translates to: QQGLVARMSENRGYYWSGNLSSY*VSLVTN
Trigger: ATTAGTCACTAGCGAGACCCAGTAGGAAGAGAGGTT...TCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000628193.2
CDS-3UTR TCA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGACATCTAGGAGGGCGATaGCATTCTTCCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGHLGGR*HSSSAA
Trigger: GGCGGCCGAGGAAGAATGTCATCGCCCTCCTAGATG...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTGTTTGTGCCTCCAGCTaGGGTGGTCACCACACCTTC +
Preference number: 4 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFVCASS*GGHHTF
Trigger: GAAGGTGTGGTGACCACCTCAGCTGGAGGCACAAAC...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTACGACATCAATGCCCTaGTTGGCCAGCATTCCTAAA +
Preference number: 4 (lower is better)
Translates to: GSVLSARFHSAHEGKHSATTSMP*LASIPK
Trigger: TTTAGGAATGCTGGCCAATCAGGGCATTGATGTCGT...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GATGTCTACATTTTCCTTTGGGATGGATGTGGCCTACCTAGGCTAAGATCACGCACGACATCAATGCCCTaGTTGGCCAGCATTCCTAAA +
Preference number: 4 (lower is better)
Translates to: DVYIFLWDGCGLPRLRSRTTSMP*LASIPK
Trigger: TTTAGGAATGCTGGCCAATCAGGGCATTGATGTCGT...GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp AGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGCTAAGATCACGCTATaGCATTTAGTCTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SRGWLLGCLKTEDTTGVEAKITL*HLVSLE
Trigger: CTCCAAAGAGACTAAATGTCATAGCGTGATCTTAGC...CTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp TTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACGGTTATAATGCTGTGTaGCAGGATCATGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: FLLGVCCQLVFIVHMKGNGYNAV*QDHGEL
Trigger: CAACTCCCCATGATCCTGTCACACAGCATTATAACC...GTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGGTGTGTGTGTGTACCTaGTGTTTCAGTATGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEEVCVCT*CFSMLS
Trigger: AGAAAGCATACTGAAACATCAGGTACACACACACAC...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGCTGTAGTACATCTGCTGTATGCTAAATGTTGTACTTTTTaGTGGCGCTGTACTTCAACA +
Preference number: 4 (lower is better)
Translates to: PGPRALPFLLAVVHLLYAKCCTF*WRCTST
Trigger: TGTTGAAGTACAGCGCCAGCAAAAAGTACAACATTT...AGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GGGGGCCCTGCAGTCGCACCTGTACCAGTATGTAGAAGAGACGTTGATATCTGCAAATGTTGTACTTTTTaGTGGCGCTGTACTTCAACA +
Preference number: 4 (lower is better)
Translates to: GGPAVAPVPVCRRDVDICKCCTF*WRCTST
Trigger: TGTTGAAGTACAGCGCCAGCAAAAAGTACAACATTT...GCAGATATCAACGTCTCTTCTACATACTGGTACAGGTGCGACTGCAGGGCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp AAGACCCTCATGCCCCTTGAATCATATAGAACGTCCTCATCCCCCACTTCACACATGTTGCCAGGTAACTaGATCTACTGTACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KTLMPLESYRTSSSPTSHMLPGN*IYCTSC
Trigger: GCAGGAAGTACAGTAGATGCAGTTACCTGGCAACAT...GTGTGAAGTGGGGGATGAGGACGTTCTATATGATTCAAGGGGCATGAGGGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGGTTGTGGTGGTTTGTaGAGTGAGCATAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGGCGGL*SEHKSL
Trigger: TAAGGATTTATGCTCACTGCACAAACCACCACAACC...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR GCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGGGTTGTGGTGGTTTGTaGAGTGAGCATAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEEGCGGL*SEHKSL
Trigger: TAAGGATTTATGCTCACTGCACAAACCACCACAACC...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR GCA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGTCTGCTCTATACACATaGCTTTATCCTTATATAGGT +
Preference number: 4 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRSALYT*LYPYIG
Trigger: ACCTATATAAGGATAAAGGCATGTGTATAGAGCAGA...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGTGGCAAAGACCCTCATaGCCCTTGAATCATATAGAA +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEEWQRPS*PLNHIE
Trigger: TTCTATATGATTCAAGGGGCATGAGGGTCTTTGCCA...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTAGCCTCCCTAGTCTCTaGCCTAGGCAACCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFSLPSL*PRQPCL
Trigger: AAGGCAGGGTTGCCTAGGGCAGAGACTAGGGAGGCT...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATTCAGTTGCACTGACTTaGACTTTAGGCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDSVALT*TLGPPA
Trigger: GGCAGGAGGGCCTAAAGTCCAAGTCAGTGCAACTGA...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCTGGAAACATTTCTCCTaGGAGTGTGCTGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTWKHFS*ECAVSS
Trigger: CGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCA...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTCCCATTACAACTCTaGGGGAATCTGGATTCACAG +
Preference number: 4 (lower is better)
Translates to: GSVLSARFHSAHEGKHSALPLQL*GNLDSQ
Trigger: CTGTGAATCCAGATTCCCCCAGAGTTGTAATGGGAG...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTTTTGCTTTGTCCAGTTaGGGTGTGTGTGTGTACCTG +
Preference number: 4 (lower is better)
Translates to: GSVLSARFHSAHEGKHSAFALSS*GVCVYL
Trigger: CAGGTACACACACACACCCCAACTGGACAAAGCAAA...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTGCCAGCCATCATGAATaGTGGACGGATCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFASHHE*WTDPAA
Trigger: TGCAGCTGGATCCGTCCATCATTCATGATGGCTGGC...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR TCA 90 bp CAAAGCATTGACATTCTTGACCACATAAAAGCCCATGGTGACTGGAGGGATGACCATCCTCATAGTTTTTaGGATAGTAATCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: QSIDILDHIKAHGDWRDDHPHSF*DSNPGP
Trigger: CGGGCCCGGATTACTATCTCAAAAACTATGAGGATG...GTCATCCCTCCAGTCACCATGGGCTTTTATGTGGTCAAGAATGTCAATGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR TCA 90 bp TCTGGAAACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATCATCCTCATAGTTTTTaGGATAGTAATCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SGNISPGSVLSARFHSAHHPHSF*DSNPGP
Trigger: CGGGCCCGGATTACTATCTCAAAAACTATGAGGATG...ATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR TCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATCATCTAGGAGGGCGATaGCATTCTTCCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDHLGGR*HSSSAA
Trigger: GGCGGCCGAGGAAGAATGTCATCGCCCTCCTAGATG...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR TCA 90 bp GGCAGAGAAGAAGGAGTTGGGAGAGGATGGGTTTTTGTAGGTCCACCCAGTTTTGCTAAGATCACGCTATaGCATTTAGTCTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: GREEGVGRGWVFVGPPSFAKITL*HLVSLE
Trigger: CTCCAAAGAGACTAAATGTCATAGCGTGATCTTAGC...AAAACTGGGTGGACCTACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCGGTTATAATGCTGTGTaGCAGGATCATGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTGYNAV*QDHGEL
Trigger: CAACTCCCCATGATCCTGTCACACAGCATTATAACC...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGGAACCTACAAAGATGTaGAGGAGGTGTCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: RFGFVVIMLCDRIMGSCLEPTKM*RRCLDL
Trigger: CAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTC...CAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGGCTGTTCTGAATaGGCAGAACCTACAAAGATG +
Preference number: 4 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHSGCSE*AEPTKM
Trigger: CATCTTTGTAGGTTCTGCTCATTCAGAACAGCCAGA...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGGAAACACTCAGGTTCTGGAACTaGAGGAAGTCGGTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GFVVIMLCDRIMGSCLETLRFWN*RKSVLL
Trigger: CAAAAGGACCGACTTCCTGCAGTTCCAGAACCTGAG...TGTTTCCAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR GCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATCTGGCTGCCATTTACTaGCCGGCCATGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDLAAIY*PAMHGP
Trigger: CGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAG...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR GCA 90 bp AGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGCGGATAGATTGTTTGTaGCTCCAGCTGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RFGFVVIMLCDRIMGSCLRIDCL*LQLRWS
Trigger: TGACCACCTCAGCTGGAGGCACAAACAATCTATCCG...CAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GATGTCTACATTTTCCTTTGGGATGGATGTGGCCTACCTAGGCTAAGATCACGCTTTCTCCTGGGAGTGTaGTGTCAGCTCGTTTTCATA +
Preference number: 4 (lower is better)
Translates to: DVYIFLWDGCGLPRLRSRFLLGV*CQLVFI
Trigger: TATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA...GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTGGGTTCCTCAGGTTCTaGAACTGCAGGAAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFGFLRF*NCRKSV
Trigger: GACCGACTTCCTGCAGTTCCAGAACCTGAGGAACCC...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CCA 90 bp TTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACAGAGCAAATATCAGGTaGAGTCCAGAGCAATCAGCA +
Preference number: 4 (lower is better)
Translates to: FLLGVCCQLVFIVHMKGNRANIR*SPEQSA
Trigger: TGCTGATTGCTCTGGACTCCACCTGATATTTGCTCT...GTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TCTGGAAACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATTGGAATAAATCCGGATaGGCTGCAACAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SGNISPGSVLSARFHSAHWNKSG*AATGSS
Trigger: TGAAGAGCCTGTTGCAGCCCATCCGGATTTATTCCA...ATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTTGTGTGACAGGATCATaGGGAGTTGTCTGGAAACAT +
Preference number: 4 (lower is better)
Translates to: GSVLSARFHSAHEGKHSACVTGS*GVVWKH
Trigger: ATGTTTCCAGACAACTCCCCATGATCCTGTCACACA...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGACAGCAGGCTAAGGTTTaGATTTGTGGTTATAATGCT +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGQQAKV*ICGYNA
Trigger: AGCATTATAACCACAAATCCAAACCTTAGCCTGCTG...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATCAGAGAAGAAGGAGTTaGGAGAGGATGGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHQRRRS*ERMGFC
Trigger: ACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTG...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGCCCATTACTCCCCTATaGAAAGAGATGTGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEEPITPL*KEMCQK
Trigger: TTTTTGACACATCTCTTTCCATAGGGGAGTAATGGG...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCCTCCCATTACAACTCTaGGGGAATCTGGATTCACAG +
Preference number: 4 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTLPLQL*GNLDSQ
Trigger: CTGTGAATCCAGATTCCCCCAGAGTTGTAATGGGAG...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CACTGTCAGGAACCCAGATGCGCACGCTCATACATCAGCCGGGAAATCATACAAGCTCTTAGGGACCTTTaGTTACTCTTGTTATATCAG +
Preference number: 4 (lower is better)
Translates to: HCQEPRCARSYISREIIQALRDL*LLLLYQ
Trigger: CTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGC...TTGTATGATTTCCCGGCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTGCTCTTAGGGACCTTTaGTTACTCTTGTTATATCAG +
Preference number: 4 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAAALRDL*LLLLYQ
Trigger: CTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGC...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGCAGAGAAGAAGGAGTTGGGAGAGGATGGGTTTTTGTAGGTCCACCCAGTTTTGAAAGTGTGTTTGAGTaGAGTTCTGGCTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GREEGVGRGWVFVGPPSFESVFE*SSGCSE
Trigger: TTCAGAACAGCCAGAACTCCACTCAAACACACTTTC...AAAACTGGGTGGACCTACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GATGTCTACATTTTCCTTTGGGATGGATGTGGCCTACCTAGGCTAAGATCACGCAACCTCTCTTCCTACTaGGTCTCGCTAGTGACTAAT +
Preference number: 4 (lower is better)
Translates to: DVYIFLWDGCGLPRLRSRNLSSY*VSLVTN
Trigger: ATTAGTCACTAGCGAGACCCAGTAGGAAGAGAGGTT...GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000628193.2
3UTR CAA 72 bp CCCGCCCCATTCCTGTCCTTTCACAAACAGCAGAAATaGTATCACCGTCTCACTTGGAACAGTGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: PAPFLSFHKQQK*YHRLTWNSVKS
Trigger: AGATTTGACACTGTTCCAAGTGAGACGGTGATACAATTTCTGCTGTTTGTGAAAGGACAGGAATGGGGCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATTTCCTGCCACCTTCATaGATCCATCTAGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHFLPPS*IHLGGR
Trigger: TCGCCCTCCTAGATGGATTCATGAAGGTGGCAGGAA...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp TCTGGAAACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATTTCTGGTCCACGAGGTaGTTGTATCCATGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: SGNISPGSVLSARFHSAHFWSTR*LYPWSK
Trigger: TTTTGACCATGGATACAATCACCTCGTGGACCAGAA...ATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCTTCTGGTCCACGAGGTaGTTGTATCCATGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTFWSTR*LYPWSK
Trigger: TTTTGACCATGGATACAATCACCTCGTGGACCAGAA...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGGCTAAGATCACGCTATaGCATTTAGTCTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSSSRLRFGFVVIMLCDRAKITL*HLVSLE
Trigger: CTCCAAAGAGACTAAATGTCATAGCGTGATCTTAGC...CCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGCTGCTCTCCACTCAATaGATATTGTTACTTGACTCC +
Preference number: 4 (lower is better)
Translates to: NISPGSVLSARFHSAHEGLLSTQ*ILLLDS
Trigger: GGAGTCAAGTAACAATATTCATTGAGTGGAGAGCAG...CCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGTCCCTCATAGCAACATaGAGAATGATGACTACTTTT +
Preference number: 4 (lower is better)
Translates to: SRGWLLGCLKTEDTTGVESLIAT*RMMTTF
Trigger: AAAAGTAGTCATCATTCTTCATGTTGCTATGAGGGA...CTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp AACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGGTGTGTGTGTGTACCTaGTGTTTCAGTATGCTTTCT +
Preference number: 4 (lower is better)
Translates to: NISPGSVLSARFHSAHEGVCVCT*CFSMLS
Trigger: AGAAAGCATACTGAAACATCAGGTACACACACACAC...CCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGAAGTCGGTCCTTTTaGCCCCGAAGCGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDGSRSF*PRSAER
Trigger: CCTTTCTGCGCTTCGGGGGCAAAAGGACCGACTTCC...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR GCA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATCAGATGCATCTGAGCTaGCTTCTCCCTTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHQMHLS*LLPLEL
Trigger: GAGCTCCAAAGGGAGAAGGCAGCTCAGATGCATCTG...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR GCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATTGGAGCCCAGCCACATaGACAGCCAAGACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDWSPAT*TAKTLG
Trigger: CCCCAAAGTCTTGGCTGTGCATGTGGCTGGGCTCCA...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR GCA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCTTTCTCCTGGGAGTGTaGTGTCAGCTCGTTTTCATA +
Preference number: 4 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTFLLGV*CQLVFI
Trigger: TATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGACTACTTTTTGTTGTaGCTAATAAACTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QGLVARMSENRGYYWSGGDYFLL*LINCSP
Trigger: TGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTC...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTTGGCAAAGACCCTCATaGCCCTTGAATCATATAGAA +
Preference number: 4 (lower is better)
Translates to: GSVLSARFHSAHEGKHSAWQRPS*PLNHIE
Trigger: TTCTATATGATTCAAGGGGCATGAGGGTCTTTGCCA...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATATTGACTGTCCTGACTaGGTTCTTGGTGCTCACATC +
Preference number: 4 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDIDCPD*VLGAHI
Trigger: GATGTGAGCACCAAGAACCCAGTCAGGACAGTCAAT...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370552.8
CDS-3UTR CCA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGAGGGTCACCAAGCGCTTaGAGCTTAGGAAATCGAGCC +
Preference number: 4 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGGSPSA*SLGNRA
Trigger: GGCTCGATTTCCTAAGCTCCAAGCGCTTGGTGACCC...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR CCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATTGCCTCCAGCTGAGGTaGTCACCACACCTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDCLQLR*SPHLQA
Trigger: GGCTTGAAGGTGTGGTGACCACCTCAGCTGGAGGCA...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGCACAGCCAAGACTTTaGGGCCGATCAGGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDAQPRL*GRSGAC
Trigger: ACAAGCGCCTGATCGGCCCCAAAGTCTTGGCTGTGC...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTAAAGCCCATGGTGACTaGAGGGATGACCAATGTCCG +
Preference number: 4 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFKAHGD*RDDQCP
Trigger: CGGACATTGGTCATCCCTCCAGTCACCATGGGCTTT...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATAACTCTGGGGGAATCTaGATTCACAGAGGAATAGAA +
Preference number: 4 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHNSGGI*IHRGIE
Trigger: TTCTATTCCTCTGTGAATCCAGATTCCCCCAGAGTT...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATGAAAGTGTGTTTGAGTaGAGTTCTGGCTGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHESVFE*SSGCSE
Trigger: TTCAGAACAGCCAGAACTCCACTCAAACACACTTTC...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CAA 72 bp CTGCAGTCGCACCTGTACCAGTATGTAGAAGAGACGTaGATATCTGCACACATTTTTAACAGTTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LQSHLYQYVEET*ISAHIFNSWGN
Trigger: GTTCCCCCAACTGTTAAAAATGTGTGCAGATATCAACGTCTCTTCTACATACTGGTACAGGTGCGACTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp TTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACCTCATTCAATCCCTCTaGTTTAAACCTCTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: FLLGVCCQLVFIVHMKGNLIQSL*FKPLFL
Trigger: TAGGAAGAGAGGTTTAAATCAGAGGGATTGAATGAG...GTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR TCA 90 bp GATGTCTACATTTTCCTTTGGGATGGATGTGGCCTACCTAGGCTAAGATCACGCCTCATTCAATCCCTCTaGTTTAAACCTCTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: DVYIFLWDGCGLPRLRSRLIQSL*FKPLFL
Trigger: TAGGAAGAGAGGTTTAAATCAGAGGGATTGAATGAG...GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR TCA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCGCTAAGATCACGCTATaGCATTTAGTCTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTAKITL*HLVSLE
Trigger: CTCCAAAGAGACTAAATGTCATAGCGTGATCTTAGC...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GGCAGAGAAGAAGGAGTTGGGAGAGGATGGGTTTTTGTAGGTCCACCCAGTTTTATGAATATTGTTACTTaGCTCCCATTACAACTCTGG +
Preference number: 4 (lower is better)
Translates to: GREEGVGRGWVFVGPPSFMNIVT*LPLQLW
Trigger: CCAGAGTTGTAATGGGAGTCAAGTAACAATATTCAT...AAAACTGGGTGGACCTACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GAGGGCAGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTTCCCTCATAGCAACATaGAGAATGATGACTACTTTT +
Preference number: 4 (lower is better)
Translates to: EGSSSSRLRFGFVVIMLCSLIAT*RMMTTF
Trigger: AAAAGTAGTCATCATTCTTCATGTTGCTATGAGGGA...ACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCTGCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTCGGATAGATTGTTTGTaGCTCCAGCTGAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFRIDCL*LQLRWS
Trigger: TGACCACCTCAGCTGGAGGCACAAACAATCTATCCG...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp GACTACTTTTTGTTGTGCCTAATAAACTGCTCTCCACTCAATGAATATTGTTACTGGAGCCCAGCCACATaGACAGCCAAGACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: DYFLLCLINCSPLNEYCYWSPAT*TAKTLG
Trigger: CCCCAAAGTCTTGGCTGTGCATGTGGCTGGGCTCCA...GTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGAATCCTTAACTCCGTGTaGGTCTTAGGCAGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGILNSV*VLGSLP
Trigger: AGGGAGGCTGCCTAAGACGCACACGGAGTTAAGGAT...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATTATATCAGGGGGCCCTaGAGTCGCACCTGTACCAGT +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDYIRGP*SRTCTS
Trigger: ACTGGTACAGGTGCGACTGCAGGGCCCCCTGATATA...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCGGGTCACCAAGCGCTTaGAGCTTAGGAAATCGAGCC +
Preference number: 4 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFGSPSA*SLGNRA
Trigger: GGCTCGATTTCCTAAGCTCCAAGCGCTTGGTGACCC...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370552.8
CDS-3UTR CCA 90 bp GGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGGAAACACATATAAGCTGGCTCTaGAATAAATCCGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: GFVVIMLCDRIMGSCLETHISWL*NKSGWA
Trigger: AGCCCATCCGGATTTATTCCAGAGCCAGCTTATATG...TGTTTCCAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp AGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGCATCAATGCCCTGATTaGCCAGCATTCCTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: RFGFVVIMLCDRIMGSCLHQCPD*PAFLKC
Trigger: ACACTTTAGGAATGCTGGCCAATCAGGGCATTGATG...CAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGATCAGTTGCACTGACTTaGACTTTAGGCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGSVALT*TLGPPA
Trigger: GGCAGGAGGGCCTAAAGTCCAAGTCAGTGCAACTGA...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGAAAAGCCCATGGTGACTaGAGGGATGACCAATGTCCG +
Preference number: 4 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGKAHGD*RDDQCP
Trigger: CGGACATTGGTCATCCCTCCAGTCACCATGGGCTTT...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp AACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACATCCACAGATTGATTCCAGCAGGATaGGGCAGCAGGGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: NKSIIPVIYPEKENHIHRLIPAG*GSRGWL
Trigger: CAACCAGCCCCTGCTGCCCCATCCTGCTGGAATCAA...TCTGTGGATGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGGAAACATGTGTGACAGGATCATaGGGAGTTGTCTGGAAACAT +
Preference number: 4 (lower is better)
Translates to: GFVVIMLCDRIMGSCLETCVTGS*GVVWKH
Trigger: ATGTTTCCAGACAACTCCCCATGATCCTGTCACACA...TGTTTCCAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATCAGCAGGCTAAGGTTTaGATTTGTGGTTATAATGCT +
Preference number: 4 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHQQAKV*ICGYNA
Trigger: AGCATTATAACCACAAATCCAAACCTTAGCCTGCTG...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATCAGAGAAGAAGGAGTTaGGAGAGGATGGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDQRRRS*ERMGFC
Trigger: ACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTG...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TCTGGAAACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATAACTCTGGGGGAATCTaGATTCACAGAGGAATAGAA +
Preference number: 4 (lower is better)
Translates to: SGNISPGSVLSARFHSAHNSGGI*IHRGIE
Trigger: TTCTATTCCTCTGTGAATCCAGATTCCCCCAGAGTT...ATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATGACTACTTTTTGTTGTaGCTAATAAACTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHDYFLL*LINCSP
Trigger: TGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTC...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCCTGCCCGGCCATGCATaGTCCGATAGTTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFLPGHA*SDSYLA
Trigger: AGCCAAATAACTATCGGACCATGCATGGCCGGGCAG...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATCTGCCCGGCCATGCATaGTCCGATAGTTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDLPGHA*SDSYLA
Trigger: AGCCAAATAACTATCGGACCATGCATGGCCGGGCAG...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATTGGAATAAATCCGGATaGGCTGCAACAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHWNKSG*AATGSS
Trigger: TGAAGAGCCTGTTGCAGCCCATCCGGATTTATTCCA...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATAACAGAGGATACTACTaGAGTGGAGGAGTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHNRGYY*SGGVEA
Trigger: TGCTTCCACTCCTCCACTCCAGTAGTATCCTCTGTT...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATTATCACCGTCTCACTTaGAACAGTGTCAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDYHRLT*NSVKSL
Trigger: GAGAGATTTGACACTGTTCCAAGTGAGACGGTGATA...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GATGTCTACATTTTCCTTTGGGATGGATGTGGCCTACCTAGGCTAAGATCACGCGGTCCGATAGTTATTTaGCTCATCCTCATAGTTTTT +
Preference number: 4 (lower is better)
Translates to: DVYIFLWDGCGLPRLRSRGPIVI*LILIVF
Trigger: AAAAACTATGAGGATGAGCCAAATAACTATCGGACC...GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628193.2
CDS-3UTR TCA 90 bp AGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGCTCATTCAATCCCTCTaGTTTAAACCTCTCTTCCTA +
Preference number: 4 (lower is better)
Translates to: RFGFVVIMLCDRIMGSCLLIQSL*FKPLFL
Trigger: TAGGAAGAGAGGTTTAAATCAGAGGGATTGAATGAG...CAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR TCA 90 bp AACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACATCCACAGAAGAGCAAGTCTGTGTTaGTTCCAGCAGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: NKSIIPVIYPEKENHIHRRASLC*FQQDGA
Trigger: TGCCCCATCCTGCTGGAATCAACACAGACTTGCTCT...TCTGTGGATGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTGGTCCGATAGTTATTTaGCTCATTACCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFGPIVI*LITQFP
Trigger: TGGGAACTGGGTAATGAGCCAAATAACTATCGGACC...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGATGGAATAAATCCGGATaGGCTGCAACAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGWNKSG*AATGSS
Trigger: TGAAGAGCCTGTTGCAGCCCATCCGGATTTATTCCA...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATACCATCACTAAGGGCTaGCCATTCAGTTGCACTGAC +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDTITKG*PFSCTD
Trigger: GTCAGTGCAACTGAATGGCCAGCCCTTAGTGATGGT...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATTGTGTGACAGGATCATaGGGAGTTGTCTGGAAACAT +
Preference number: 4 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHCVTGS*GVVWKH
Trigger: ATGTTTCCAGACAACTCCCCATGATCCTGTCACACA...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATCAGCAGGCTAAGGTTTaGATTTGTGGTTATAATGCT +
Preference number: 4 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDQQAKV*ICGYNA
Trigger: AGCATTATAACCACAAATCCAAACCTTAGCCTGCTG...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGGAAACACCCATTACTCCCCTATaGAAAGAGATGTGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: GFVVIMLCDRIMGSCLETPITPL*KEMCQK
Trigger: TTTTTGACACATCTCTTTCCATAGGGGAGTAATGGG...TGTTTCCAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp GACTACTTTTTGTTGTGCCTAATAAACTGCTCTCCACTCAATGAATATTGTTACTCAGCTGTAGCTCATTaGCAAAGACCCTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: DYFLLCLINCSPLNEYCYSAVAH*QRPSCP
Trigger: GGGGCATGAGGGTCTTTGCCAATGAGCTACAGCTGA...GTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
3UTR CAA 72 bp ATCCACAGAAAAGAAAGTCATTTCAGCTGTAGCTCATaGGCAAAGACCCTCATGCCCCTTGAATCATATAGA +
Preference number: 4 (lower is better)
Translates to: IHRKESHFSCSS*AKTLMPLESYR
Trigger: TCTATATGATTCAAGGGGCATGAGGGTCTTTGCCAATGAGCTACAGCTGAAATGACTTTCTTTTCTGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCACGACATCAATGCCCTaGTTGGCCAGCATTCCTAAA +
Preference number: 4 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFTTSMP*LASIPK
Trigger: TTTAGGAATGCTGGCCAATCAGGGCATTGATGTCGT...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATATTGACTGTCCTGACTaGGTTCTTGGTGCTCACATC +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDIDCPD*VLGAHI
Trigger: GATGTGAGCACCAAGAACCCAGTCAGGACAGTCAAT...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR CCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCATAACATCAGGGTGCTaGGCAATCTTGCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFITSGC*AILQPF
Trigger: GAAAGGCTGCAAGATTGCCCAGCACCCTGATGTTAT...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370552.8
CDS-3UTR CCA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATTGTTGTACTTTTTGCTaGCGCTGTACTTCAACAGAC +
Preference number: 4 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHCCTFC*RCTSTD
Trigger: GTCTGTTGAAGTACAGCGCCAGCAAAAAGTACAACA...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGAGGTCCGATAGTTATTTaGCTCATTACCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGGPIVI*LITQFP
Trigger: TGGGAACTGGGTAATGAGCCAAATAACTATCGGACC...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGACATATAAGCTGGCTCTaGAATAAATCCGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGHISWL*NKSGWA
Trigger: AGCCCATCCGGATTTATTCCAGAGCCAGCTTATATG...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCTTTGCTTTGTCCAGTTaGGGTGTGTGTGTGTACCTG +
Preference number: 4 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFFALSS*GVCVYL
Trigger: CAGGTACACACACACACCCCAACTGGACAAAGCAAA...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTTATCACCGTCTCACTTaGAACAGTGTCAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFYHRLT*NSVKSL
Trigger: GAGAGATTTGACACTGTTCCAAGTGAGACGGTGATA...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GACTACTTTTTGTTGTGCCTAATAAACTGCTCTCCACTCAATGAATATTGTTACACGACATCAATGCCCTaGTTGGCCAGCATTCCTAAA +
Preference number: 4 (lower is better)
Translates to: DYFLLCLINCSPLNEYCYTTSMP*LASIPK
Trigger: TTTAGGAATGCTGGCCAATCAGGGCATTGATGTCGT...GTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCTACAGAAAGTGTGTTTaGGTGGAGTTCTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFYRKCV*VEFWLF
Trigger: GAACAGCCAGAACTCCACTCAAACACACTTTCTGTA...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATATGTTGCCAGGTAACTaGATCTACTGTACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDMLPGN*IYCTSC
Trigger: GCAGGAAGTACAGTAGATGCAGTTACCTGGCAACAT...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR GCA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGAGGTTGTGGTGGTTTGTaGAGTGAGCATAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGGCGGL*SEHKSL
Trigger: TAAGGATTTATGCTCACTGCACAAACCACCACAACC...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR GCA 90 bp GGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGGAAACATCTGCTCTATACACATaGCTTTATCCTTATATAGGT +
Preference number: 4 (lower is better)
Translates to: GFVVIMLCDRIMGSCLETSALYT*LYPYIG
Trigger: ACCTATATAAGGATAAAGGCATGTGTATAGAGCAGA...TGTTTCCAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCTGGAGAGGTCTAATTTaGTTTGTCCAGTTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFWRGLI*FVQLGC
Trigger: ACACCCCAACTGGACAAAGCAAATTAGACCTCTCCA...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCTGTTCCAGGAGTTATTaGGATTACGACGCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFCSRSY*DYDAVH
Trigger: ATGCACTGCGTCGTAATCCCAATAACTCCTGGAACA...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATCATATAAGCTGGCTCTaGAATAAATCCGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDHISWL*NKSGWA
Trigger: AGCCCATCCGGATTTATTCCAGAGCCAGCTTATATG...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CCA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCCATCAATGCCCTGATTaGCCAGCATTCCTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFHQCPD*PAFLKC
Trigger: ACACTTTAGGAATGCTGGCCAATCAGGGCATTGATG...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp GACTACTTTTTGTTGTGCCTAATAAACTGCTCTCCACTCAATGAATATTGTTACTCTGGCTGTTCTGAATaGGCAGAACCTACAAAGATG +
Preference number: 4 (lower is better)
Translates to: DYFLLCLINCSPLNEYCYSGCSE*AEPTKM
Trigger: CATCTTTGTAGGTTCTGCTCATTCAGAACAGCCAGA...GTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CTCCTTCTAACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACATGGAGAGGTCTAATTTaGTTTGTCCAGTTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LLLTKASFLSFILRKKITWRGLI*FVQLGC
Trigger: ACACCCCAACTGGACAAAGCAAATTAGACCTCTCCA...TGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTTAGAAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CCA 90 bp CTCCTTCTAACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACACATCAATGCCCTGATTaGCCAGCATTCCTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: LLLTKASFLSFILRKKITHQCPD*PAFLKC
Trigger: ACACTTTAGGAATGCTGGCCAATCAGGGCATTGATG...TGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTTAGAAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp CTCCTTCTAACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACAGGTTGTGGTGGTTTGTaGAGTGAGCATAAATCCTTA +
Preference number: 4 (lower is better)
Translates to: LLLTKASFLSFILRKKITGCGGL*SEHKSL
Trigger: TAAGGATTTATGCTCACTGCACAAACCACCACAACC...TGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTTAGAAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR TCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATATGAATATTGTTACTTaGCTCCCATTACAACTCTGG +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDMNIVT*LPLQLW
Trigger: CCAGAGTTGTAATGGGAGTCAAGTAACAATATTCAT...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR GCA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATTCTGCTCTATACACATaGCTTTATCCTTATATAGGT +
Preference number: 4 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDSALYT*LYPYIG
Trigger: ACCTATATAAGGATAAAGGCATGTGTATAGAGCAGA...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp GTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCAGGAAGTCCATCACCTaGACCACCCGGCCATCAATG +
Preference number: 5 (lower is better)
Translates to: VRPARRGRGFNSGRVPSSRKSIT*TTRPSM
Trigger: CATTGATGGCCGGGTGGTCAAGGTGATGGACTTCCT...GGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp AAGCCCATGGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGAGGAAGTCGGTCCTTTaGCCCCCGAAGCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: KPMVTGGMTNVRPARRGRRKSVL*PPKRRK
Trigger: CTTTCTGCGCTTCGGGGGCAAAAGGACCGACTTCCT...CCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp ATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCTGCACAGCCAAGACTTaGGGGCCGATCAGGCGCTTG +
Preference number: 5 (lower is better)
Translates to: MTNVRPARRGRGFNSGRVCTAKT*GPIRRL
Trigger: CAAGCGCCTGATCGGCCCCAAAGTCTTGGCTGTGCA...GACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp GGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAAAGGGTCACCAAGCGCTaGGAGCTTAGGAAATCGAGC +
Preference number: 5 (lower is better)
Translates to: GDWRDDQCPAGPKGAGLQRVTKR*ELRKSS
Trigger: GCTCGATTTCCTAAGCTCCAAGCGCTTGGTGACCCT...TTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp GGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGGGGCTTCAAGAGAGGAAGTTCTCATaGACTGTCCTGACTGGGTTC +
Preference number: 5 (lower is better)
Translates to: GDWRDDQCPAGPKGAGLQERKFS*TVLTGF
Trigger: GAACCCAGTCAGGACAGTCAATGAGAACTTCCTCTC...TTGAAGCCCCGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp AAAGCCCATGGTGACTGGAGGGATGACCAATGTCCGGCCGGCCCGAAGGGGGCGCTGTTCCAGGAGTTATaGGGATTACGACGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: KAHGDWRDDQCPAGPKGALFQEL*GLRRSA
Trigger: TGCACTGCGTCGTAATCCCAATAACTCCTGGAACAG...CGCCCCCTTCGGGCCGGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGCGCCCCGCCCCCATCTaGGTACTTCACTTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRRPAPI*VLHFPA
Trigger: GGCAGGAAAGTGAAGTACCAAGATGGGGGCGGGGCG...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp CCCAGGGCCAGGCTCTTAGGGACCTTTGGTTACTCTTGTTATATCAGGGGGCCCCGCCCCGCCCCCATCTaGGTACTTCACTTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: PRARLLGTFGYSCYIRGPRPAPI*VLHFPA
Trigger: GGCAGGAAAGTGAAGTACCAAGATGGGGGCGGGGCG...GGGCCCCCTGATATAACAAGAGTAACCAAAGGTCCCTAAGAGCCTGGCCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGGGGTGCTGGGCAATCTaGCAGCCTTTCTGTTTATCT +
Preference number: 5 (lower is better)
Translates to: GRGFNSGRVPSSTITKGWGCWAI*QPFCLS
Trigger: AGATAAACAGAAAGGCTGCAAGATTGCCCAGCACCC...CCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp CCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGCTGTAGTACATCTGCTGTATGCTTGCACAGCCAAGACTTaGGGGCCGATCAGGCGCTTG +
Preference number: 5 (lower is better)
Translates to: PGPRALPFLLAVVHLLYACTAKT*GPIRRL
Trigger: CAAGCGCCTGATCGGCCCCAAAGTCTTGGCTGTGCA...AGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGTGTGGTTGTGGTGGTTaGTGCAGTGAGCATAAATCC +
Preference number: 5 (lower is better)
Translates to: GRGFNSGRVPSSTITKGWCGCGG*CSEHKS
Trigger: GGATTTATGCTCACTGCACAAACCACCACAACCACA...CCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp GCCCGAAGGGGGCGGGGCTTCAATTCTGGGAGGGTCCCGTCGTCCACCATCACTAGAGTCCCAGCCAGCTaGATTTTCTTTCTTGATCGA +
Preference number: 5 (lower is better)
Translates to: ARRGRGFNSGRVPSSTITRVPAS*IFFLDR
Trigger: TCGATCAAGAAAGAAAATCAAGCTGGCTGGGACTCT...AGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp TCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCCATTCAGTTGCACTAGCTGCCTTCTCCCTTaGGAGCTCCAGCATAACATC +
Preference number: 5 (lower is better)
Translates to: SGRVPSSTITKGWPFSCTSCLLP*ELQHNI
Trigger: GATGTTATGCTGGAGCTCCAAAGGGAGAAGGCAGCT...AGTGCAACTGAATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp CCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGCTGTAGTACATCTGCTGTATGCTAGGAAGTCCATCACCTaGACCACCCGGCCATCAATG +
Preference number: 5 (lower is better)
Translates to: PGPRALPFLLAVVHLLYARKSIT*TTRPSM
Trigger: CATTGATGGCCGGGTGGTCAAGGTGATGGACTTCCT...AGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGTGCACAGCCAAGACTTaGGGGCCGATCAGGCGCTTG +
Preference number: 5 (lower is better)
Translates to: RGWLLGCLKTEDTTGVEECTAKT*GPIRRL
Trigger: CAAGCGCCTGATCGGCCCCAAAGTCTTGGCTGTGCA...CTCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp CCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGCTGTAGTACATCTGCTGTATGCTGGCAGCAGGGGCTGGTaGCTAGGATGTCTGAAAACA +
Preference number: 5 (lower is better)
Translates to: PGPRALPFLLAVVHLLYAGSRGW*LGCLKT
Trigger: TGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC...AGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTAGGCAACCCTGCCTaGCCCCCGCCCCATTCCTGT +
Preference number: 5 (lower is better)
Translates to: GSVLSARFHSAHEGKHSALGNPA*PPPHSC
Trigger: ACAGGAATGGGGCGGGGGCAAGGCAGGGTTGCCTAG...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATCTAGGCAACCCTGCCTaGCCCCCGCCCCATTCCTGT +
Preference number: 5 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHLGNPA*PPPHSC
Trigger: ACAGGAATGGGGCGGGGGCAAGGCAGGGTTGCCTAG...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGCCCTTCTGGGCAGCCTaGCAGGGCGGTCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SRLRFGFVVIMLCDRIMGPFWAA*QGGLRV
Trigger: GACCCTGAGACCGCCCTGCAAGGCTGCCCAGAAGGG...CCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGAGGAAGTCGGTCCTTTaGCCCCCGAAGCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: SRGWLLGCLKTEDTTGVERKSVL*PPKRRK
Trigger: CTTTCTGCGCTTCGGGGGCAAAAGGACCGACTTCCT...CTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR CAA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGAGCAAGTCTGTGTaGATTCCAGCAGGATGGGGC +
Preference number: 5 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVESKSV*IPAGWG
Trigger: GCCCCATCCTGCTGGAATCAACACAGACTTGCTCTC...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTAGGGTCACCAAGCGCTaGGAGCTTAGGAAATCGAGC +
Preference number: 5 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAARVTKR*ELRKSS
Trigger: GCTCGATTTCCTAAGCTCCAAGCGCTTGGTGACCCT...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370552.8
CDS-3UTR CAA 90 bp GGGGGCCCTGCAGTCGCACCTGTACCAGTATGTAGAAGAGACGTTGATATCTGCCTGTTCCAGGAGTTATaGGGATTACGACGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: GGPAVAPVPVCRRDVDICLFQEL*GLRRSA
Trigger: TGCACTGCGTCGTAATCCCAATAACTCCTGGAACAG...GCAGATATCAACGTCTCTTCTACATACTGGTACAGGTGCGACTGCAGGGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGAGGAAGTCCATCACCTaGACCACCCGGCCATCAATG +
Preference number: 5 (lower is better)
Translates to: SRGWLLGCLKTEDTTGVERKSIT*TTRPSM
Trigger: CATTGATGGCCGGGTGGTCAAGGTGATGGACTTCCT...CTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTTGCACAGCCAAGACTTaGGGGCCGATCAGGCGCTTG +
Preference number: 5 (lower is better)
Translates to: GSVLSARFHSAHEGKHSACTAKT*GPIRRL
Trigger: CAAGCGCCTGATCGGCCCCAAAGTCTTGGCTGTGCA...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp CAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGCAGCAGGGGCTGGTaGCTAGGATGTCTGAAAACA +
Preference number: 5 (lower is better)
Translates to: QQGLVARMSENRGYYWSGGSRGW*LGCLKT
Trigger: TGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC...TCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp AGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAGAGCAAGTCTGTGTaGATTCCAGCAGGATGGGGC +
Preference number: 5 (lower is better)
Translates to: SRGWLLGCLKTEDTTGVEESKSV*IPAGWG
Trigger: GCCCCATCCTGCTGGAATCAACACAGACTTGCTCTC...CTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp CACTGTCAGGAACCCAGATGCGCACGCTCATACATCAGCCGGGAAATCATACAAGAGAGCAAGTCTGTGTaGATTCCAGCAGGATGGGGC +
Preference number: 5 (lower is better)
Translates to: HCQEPRCARSYISREIIQESKSV*IPAGWG
Trigger: GCCCCATCCTGCTGGAATCAACACAGACTTGCTCTC...TTGTATGATTTCCCGGCTGATGTATGAGCGTGCGCATCTGGGTTCCTGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGTTGGAGAGGTCTAATTaGCTTTGTCCAGTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRLERSN*LCPVGV
Trigger: CACCCCAACTGGACAAAGCAAATTAGACCTCTCCAA...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS TCA 90 bp AGGGTCACCAAGCGCTTGGAGCTTAGGAAATCGAGCCAGCCATCATaGATGATGGACGGATCCAGCTGCAGAGAGAGGAAGTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: RVTKRLELRKSSQPS*MMDGSSCRERKFSL
Trigger: CAATGAGAACTTCCTCTCTCTGCAGCTGGATCCGTCCATCATTCATGATGGCTGGCTCGATTTCCTAAGCTCCAAGCGCTTGGTGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000614306.1
ENST00000628193.2
CDS GCA 90 bp GCTGCAACAGGCTCTTCAGCTGGATGTAATCCTTTCCCAACTGGCTaGCATTTACTGCCCGGCCATGCATGGTCCGATAGTTATTTGGCT +
Preference number: 5 (lower is better)
Translates to: AATGSSAGCNPFPTG*HLLPGHAWSDSYLA
Trigger: AGCCAAATAACTATCGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAAAGGATTACATCCAGCTGAAGAGCCTGTTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATAGGAAGTCGGTCCTTTaGCCCCCGAAGCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHRKSVL*PPKRRK
Trigger: CTTTCTGCGCTTCGGGGGCAAAAGGACCGACTTCCT...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CAA 90 bp TCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTGGCCATTCAGTTGCACTATCAATGTAGCAATGTaGCCAGGTAACTGCATCTAC +
Preference number: 5 (lower is better)
Translates to: SGRVPSSTITKGWPFSCTINVAM*PGNCIY
Trigger: GTAGATGCAGTTACCTGGCAACATTGCTACATTGAT...AGTGCAACTGAATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp AGCACCCGCTTCCCAGAAGAACTGCCAGTGATGGATGCCACTGTCAGGAACCCAAGAGTCCCAGCCAGCTaGATTTTCTTTCTTGATCGA +
Preference number: 5 (lower is better)
Translates to: STRFPEELPVMDATVRNPRVPAS*IFFLDR
Trigger: TCGATCAAGAAAGAAAATCAAGCTGGCTGGGACTCT...TGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGATTCAGTTGCACTGACTaGGACTTTAGGCCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QGLVARMSENRGYYWSGGFSCTD*DFRPSC
Trigger: GCAGGAGGGCCTAAAGTCCAAGTCAGTGCAACTGAA...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp CCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGCTGTAGTACATCTGCTGTATGCTAGACCCTCATGCCCCTaGAATCATATAGAACGTCCT +
Preference number: 5 (lower is better)
Translates to: PGPRALPFLLAVVHLLYARPSCP*NHIERP
Trigger: AGGACGTTCTATATGATTCAAGGGGCATGAGGGTCT...AGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AGCACCCGCTTCCCAGAAGAACTGCCAGTGATGGATGCCACTGTCAGGAACCCACACAAACAGCAGAAATaGTATCACCGTCTCACTTGG +
Preference number: 5 (lower is better)
Translates to: STRFPEELPVMDATVRNPHKQQK*YHRLTW
Trigger: CCAAGTGAGACGGTGATACAATTTCTGCTGTTTGTG...TGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp CCTGGTCCTCGGGCTCTCCCTTTCTTGCTCGCTGTAGTACATCTGCTGTATGCTTCTCACTTTGCAGACTaGGCCCAAATCCTTAACTCC +
Preference number: 5 (lower is better)
Translates to: PGPRALPFLLAVVHLLYASHFAD*AQILNS
Trigger: GGAGTTAAGGATTTGGGCCAAGTCTGCAAAGTGAGA...AGCATACAGCAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCGAGGACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GAGGGCAGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTCGGGCTCTCCCTTTCTaGCTCGCTGTAGTACATCTG +
Preference number: 5 (lower is better)
Translates to: EGSSSSRLRFGFVVIMLCRALPF*LAVVHL
Trigger: CAGATGTACTACAGCGAGCAAGAAAGGGAGAGCCCG...ACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCTGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS GCA 90 bp GCTCTTCAGCTGGATGTAATCCTTTCCCAACTGGCTGCCATTTACTaGCCGGCCATGCATGGTCCGATAGTTATTTGGCTCATTACCCAG +
Preference number: 5 (lower is better)
Translates to: ALQLDVILSQLAAIY*PAMHGPIVIWLITQ
Trigger: CTGGGTAATGAGCCAAATAACTATCGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAAAGGATTACATCCAGCTGAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370546.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AATGAGCAGAACCTACAAAGATGTGAAGGAGGTGTCTGGACCTGTGGAGCCGCTGTCCTGACTGGGTTCTaGGTGCTCACATCAAGTAGA +
Preference number: 5 (lower is better)
Translates to: NEQNLQRCEGGVWTCGAAVLTGF*VLTSSR
Trigger: TCTACTTGATGTGAGCACCAAGAACCCAGTCAGGAC...AGCGGCTCCACAGGTCCAGACACCTCCTTCACATCTTTGTAGGTTCTGCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370552.8
CDS-3UTR CAA 90 bp GATGTCTACATTTTCCTTTGGGATGGATGTGGCCTACCTAGGCTAAGATCACGCAGGGTCACCAAGCGCTaGGAGCTTAGGAAATCGAGC +
Preference number: 5 (lower is better)
Translates to: DVYIFLWDGCGLPRLRSRRVTKR*ELRKSS
Trigger: GCTCGATTTCCTAAGCTCCAAGCGCTTGGTGACCCT...GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR CAA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATTGCACAGCCAAGACTTaGGGGCCGATCAGGCGCTTG +
Preference number: 5 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDCTAKT*GPIRRL
Trigger: CAAGCGCCTGATCGGCCCCAAAGTCTTGGCTGTGCA...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGTGTGGTTGTGGTGGTTaGTGCAGTGAGCATAAATCC +
Preference number: 5 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVCGCGG*CSEHKS
Trigger: GGATTTATGCTCACTGCACAAACCACCACAACCACA...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp GGGGTTACTAAGGACGCAAAGCAAACCATAGGTCCCCAGGGCCAGGCTCTTAGGCAGTATGCTTTCTCTTaGTACTCAAACTCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: GVTKDAKQTIGPQGQALRQYAFS*YSNSPS
Trigger: TGAGGGAGAGTTTGAGTACAAAGAGAAAGCATACTG...CCTAAGAGCCTGGCCCTGGGGACCTATGGTTTGCTTTGCGTCCTTAGTAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGACCCTTCTGGGCAGCCTaGCAGGGCGGTCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGPFWAA*QGGLRV
Trigger: GACCCTGAGACCGCCCTGCAAGGCTGCCCAGAAGGG...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS GCA 90 bp GCTCTTCAGCTGGATGTAATCCTTTCCCAACTGGCTGCCATTTACTaGCCGGCCATGCATGGTCCGATAGTTATTTGGCTCATCCTCATA +
Preference number: 5 (lower is better)
Translates to: ALQLDVILSQLAAIY*PAMHGPIVIWLILI
Trigger: TATGAGGATGAGCCAAATAACTATCGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAAAGGATTACATCCAGCTGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628193.2
CDS-3UTR CAA 90 bp TCTGGAAACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGGCAGCAGGGGCTGGTaGCTAGGATGTCTGAAAACA +
Preference number: 5 (lower is better)
Translates to: SGNISPGSVLSARFHSAHGSRGW*LGCLKT
Trigger: TGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC...ATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGATGTCTACATTTTCCTTaGGGATGGATGTGGCCTACC +
Preference number: 5 (lower is better)
Translates to: QGLVARMSENRGYYWSGGCLHFP*GWMWPT
Trigger: GGTAGGCCACATCCATCCCAAAGGAAAATGTAGACA...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp AGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGTTCAGCTGTAGCTCATaGGCAAAGACCCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: SSSSRLRFGFVVIMLCDRFSCSS*AKTLMP
Trigger: GGGCATGAGGGTCTTTGCCAATGAGCTACAGCTGAA...CCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGTATCACCGTCTCACTaGGAACAGTGTCAAATCTCT +
Preference number: 5 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVVSPSH*EQCQIS
Trigger: AGAGATTTGACACTGTTCCAAGTGAGACGGTGATAC...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGCAGAGAAGAAGGAGTTGGGAGAGGATGGGTTTTTGTAGGTCCACCCAGTTTTCTTCCATCTCTCACTTaGCAGACTTGGCCCAAATCC +
Preference number: 5 (lower is better)
Translates to: GREEGVGRGWVFVGPPSFLPSLT*QTWPKS
Trigger: GGATTTGGGCCAAGTCTGCAAAGTGAGAGATGGAAG...AAAACTGGGTGGACCTACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGCAGAGAAGAAGGAGTTGGGAGAGGATGGGTTTTTGTAGGTCCACCCAGTTTTGACCTTTGGTTACTCTaGTTATATCAGGGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GREEGVGRGWVFVGPPSFDLWLL*LYQGAL
Trigger: CAGGGCCCCCTGATATAACAAGAGTAACCAAAGGTC...AAAACTGGGTGGACCTACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS CCA 90 bp CTGCAGCATAGGAATCGGATAGATTGTTTGTGCCTCCAGCTGAGGTaGTCACCACACCTTCAAGCCAAATCTTCTTTCCTGGAGTGTATG +
Preference number: 5 (lower is better)
Translates to: LQHRNRIDCLCLQLR*SPHLQAKSSFLECM
Trigger: CATACACTCCAGGAAAGAAGATTTGGCTTGAAGGTGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTATCCGATTCCTATGCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp GGCCAAAGCATTGACATTCTTGACCACATAAAAGCCCATGGTGACTGGAGGGATGTCCTGACTGGGTTCTaGGTGCTCACATCAAGTAGA +
Preference number: 5 (lower is better)
Translates to: GQSIDILDHIKAHGDWRDVLTGF*VLTSSR
Trigger: TCTACTTGATGTGAGCACCAAGAACCCAGTCAGGAC...ATCCCTCCAGTCACCATGGGCTTTTATGTGGTCAAGAATGTCAATGCTTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp GATGTCTACATTTTCCTTTGGGATGGATGTGGCCTACCTAGGCTAAGATCACGCGTCCTGACTGGGTTCTaGGTGCTCACATCAAGTAGA +
Preference number: 5 (lower is better)
Translates to: DVYIFLWDGCGLPRLRSRVLTGF*VLTSSR
Trigger: TCTACTTGATGTGAGCACCAAGAACCCAGTCAGGAC...GCGTGATCTTAGCCTAGGTAGGCCACATCCATCCCAAAGGAAAATGTAGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS-3UTR CAA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTGGGTGCTGGGCAATCTaGCAGCCTTTCTGTTTATCT +
Preference number: 5 (lower is better)
Translates to: GSVLSARFHSAHEGKHSAGCWAI*QPFCLS
Trigger: AGATAAACAGAAAGGCTGCAAGATTGCCCAGCACCC...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CAA 90 bp GACATTCTTGACCACATAAAAGCCCATGGTGACTGGAGGGATGACCAATGTCCGTGGTCCGATAGTTATTaGGCTCATTACCCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: DILDHIKAHGDWRDDQCPWSDSY*AHYPVP
Trigger: GGGAACTGGGTAATGAGCCAAATAACTATCGGACCA...CGGACATTGGTCATCCCTCCAGTCACCATGGGCTTTTATGTGGTCAAGAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370546.5
CDS-3UTR CAA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGATCAATGTAGCAATGTaGCCAGGTAACTGCATCTAC +
Preference number: 5 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVINVAM*PGNCIY
Trigger: GTAGATGCAGTTACCTGGCAACATTGCTACATTGAT...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAAGAGTCCCAGCCAGCTaGATTTTCTTTCTTGATCGA +
Preference number: 5 (lower is better)
Translates to: QGLVARMSENRGYYWSGGRVPAS*IFFLDR
Trigger: TCGATCAAGAAAGAAAATCAAGCTGGCTGGGACTCT...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp AGCACCCGCTTCCCAGAAGAACTGCCAGTGATGGATGCCACTGTCAGGAACCCAGATGACTACTTTTTGTaGTGCCTAATAAACTGCTCT +
Preference number: 5 (lower is better)
Translates to: STRFPEELPVMDATVRNPDDYFL*CLINCS
Trigger: AGAGCAGTTTATTAGGCACAACAAAAAGTAGTCATC...TGGGTTCCTGACAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCTTCAGCTGTAGCTCATaGGCAAAGACCCTCATGCCC +
Preference number: 5 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTFSCSS*AKTLMP
Trigger: GGGCATGAGGGTCTTTGCCAATGAGCTACAGCTGAA...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS CCA 90 bp TGTAATCCTTTCCCAACTGGCTGCCATTTACTGCCCGGCCATGCATaGTCCGATAGTTATTTGGCTCATTACCCAGTTCCCAAGAAATGT +
Preference number: 5 (lower is better)
Translates to: CNPFPTGCHLLPGHA*SDSYLAHYPVPKKC
Trigger: ACATTTCTTGGGAACTGGGTAATGAGCCAAATAACTATCGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAAAGGATTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370546.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTAGGAAGTCGGTCCTTTaGCCCCCGAAGCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFRKSVL*PPKRRK
Trigger: CTTTCTGCGCTTCGGGGGCAAAAGGACCGACTTCCT...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CAA 90 bp CAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGGAATCAATGTAGCAATGTaGCCAGGTAACTGCATCTAC +
Preference number: 5 (lower is better)
Translates to: QGLVARMSENRGYYWSGGINVAM*PGNCIY
Trigger: GTAGATGCAGTTACCTGGCAACATTGCTACATTGAT...TCCTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp GGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTTGTGGTTGTGGTGGTTaGTGCAGTGAGCATAAATCC +
Preference number: 5 (lower is better)
Translates to: GSVLSARFHSAHEGKHSACGCGG*CSEHKS
Trigger: GGATTTATGCTCACTGCACAAACCACCACAACCACA...AGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AAGACCCTCATGCCCCTTGAATCATATAGAACGTCCTCATCCCCCACTTCACACAGAGTCCCAGCCAGCTaGATTTTCTTTCTTGATCGA +
Preference number: 5 (lower is better)
Translates to: KTLMPLESYRTSSSPTSHRVPAS*IFFLDR
Trigger: TCGATCAAGAAAGAAAATCAAGCTGGCTGGGACTCT...GTGTGAAGTGGGGGATGAGGACGTTCTATATGATTCAAGGGGCATGAGGGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGTTCAGTTGCACTGACTaGGACTTTAGGCCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RFGFVVIMLCDRIMGSCLFSCTD*DFRPSC
Trigger: GCAGGAGGGCCTAAAGTCCAAGTCAGTGCAACTGAA...CAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATTTCAGTTGCACTGACTaGGACTTTAGGCCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDFSCTD*DFRPSC
Trigger: GCAGGAGGGCCTAAAGTCCAAGTCAGTGCAACTGAA...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGCAGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGTACCATTCCATAGTTTaGGCCAGATCTTCATTCTCT +
Preference number: 5 (lower is better)
Translates to: GSRGWLLGCLKTEDTTGVYHSIV*ARSSFS
Trigger: AGAGAATGAAGATCTGGCCAAAACTATGGAATGGTA...CACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGGACCTTTGGTTACTCTaGTTATATCAGGGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: SRLRFGFVVIMLCDRIMGDLWLL*LYQGAL
Trigger: CAGGGCCCCCTGATATAACAAGAGTAACCAAAGGTC...CCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS GCA 90 bp TCAACCATAAGAATCCTGCAGCATAGGAATCGGATAGATTGTTTGTaGCTCCAGCTGAGGTGGTCACCACACCTTCAAGCCAAATCTTCT +
Preference number: 5 (lower is better)
Translates to: STIRILQHRNRIDCL*LQLRWSPHLQAKSS
Trigger: AGAAGATTTGGCTTGAAGGTGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTATCCGATTCCTATGCTGCAGGATTCTTATGGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATAGGGTCACCAAGCGCTaGGAGCTTAGGAAATCGAGC +
Preference number: 5 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHRVTKR*ELRKSS
Trigger: GCTCGATTTCCTAAGCTCCAAGCGCTTGGTGACCCT...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CAA 90 bp GGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGGAAACAGGGTGCTGGGCAATCTaGCAGCCTTTCTGTTTATCT +
Preference number: 5 (lower is better)
Translates to: GFVVIMLCDRIMGSCLETGCWAI*QPFCLS
Trigger: AGATAAACAGAAAGGCTGCAAGATTGCCCAGCACCC...TGTTTCCAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CAA 90 bp AGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGTGGTCCGATAGTTATTaGGCTCATTACCCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: SRLRFGFVVIMLCDRIMGWSDSY*AHYPVP
Trigger: GGGAACTGGGTAATGAGCCAAATAACTATCGGACCA...CCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATAGAGTCCCAGCCAGCTaGATTTTCTTTCTTGATCGA +
Preference number: 5 (lower is better)
Translates to: SPGSVLSARFHSAHEGKHRVPAS*IFFLDR
Trigger: TCGATCAAGAAAGAAAATCAAGCTGGCTGGGACTCT...ATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGTGTCTACATTTTCCTTaGGGATGGATGTGGCCTACC +
Preference number: 5 (lower is better)
Translates to: SRLRFGFVVIMLCDRIMGCLHFP*GWMWPT
Trigger: GGTAGGCCACATCCATCCCAAAGGAAAATGTAGACA...CCCCATGATCCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AGCAGGGGCTGGTTGCTAGGATGTCTGAAAACAGAGGATACTACTGGAGTGGAGATTGTAATTTTACTTTaGAAGCACCCGCTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SRGWLLGCLKTEDTTGVEIVILL*KHPLPR
Trigger: TCTGGGAAGCGGGTGCTTCAAAAGTAAAATTACAAT...CTCCACTCCAGTAGTATCCTCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGCAGAGAAGAAGGAGTTGGGAGAGGATGGGTTTTTGTAGGTCCACCCAGTTTTCAGTATGCTTTCTCTTaGTACTCAAACTCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: GREEGVGRGWVFVGPPSFQYAFS*YSNSPS
Trigger: TGAGGGAGAGTTTGAGTACAAAGAGAAAGCATACTG...AAAACTGGGTGGACCTACAAAAACCCATCCTCTCCCAACTCCTTCTTCTCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATAGCTGCCTTCTCCCTTaGGAGCTCCAGCATAACATC +
Preference number: 5 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHSCLLP*ELQHNI
Trigger: GATGTTATGCTGGAGCTCCAAAGGGAGAAGGCAGCT...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CAA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTAGCTGCCTTCTCCCTTaGGAGCTCCAGCATAACATC +
Preference number: 5 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFSCLLP*ELQHNI
Trigger: GATGTTATGCTGGAGCTCCAAAGGGAGAAGGCAGCT...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CAA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTTTCAGTTGCACTGACTaGGACTTTAGGCCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFFSCTD*DFRPSC
Trigger: GCAGGAGGGCCTAAAGTCCAAGTCAGTGCAACTGAA...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGAGAGAGCAAGTCTGTGTaGATTCCAGCAGGATGGGGC +
Preference number: 5 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGESKSV*IPAGWG
Trigger: GCCCCATCCTGCTGGAATCAACACAGACTTGCTCTC...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp GGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGGAAACAATTTGCTTTGTCCAGTaGGGGTGTGTGTGTGTACCT +
Preference number: 5 (lower is better)
Translates to: GFVVIMLCDRIMGSCLETICFVQ*GCVCVP
Trigger: AGGTACACACACACACCCCAACTGGACAAAGCAAAT...TGTTTCCAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGTCCTGACTGGGTTCTaGGTGCTCACATCAAGTAGA +
Preference number: 5 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHVLTGF*VLTSSR
Trigger: TCTACTTGATGTGAGCACCAAGAACCCAGTCAGGAC...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370549.5
ENST00000370552.8
CDS-3UTR CAA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCATCAATGTAGCAATGTaGCCAGGTAACTGCATCTAC +
Preference number: 5 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTINVAM*PGNCIY
Trigger: GTAGATGCAGTTACCTGGCAACATTGCTACATTGAT...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATAGGAAGTCCATCACCTaGACCACCCGGCCATCAATG +
Preference number: 5 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDRKSIT*TTRPSM
Trigger: CATTGATGGCCGGGTGGTCAAGGTGATGGACTTCCT...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS-3UTR CAA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCGGCAGCAGGGGCTGGTaGCTAGGATGTCTGAAAACA +
Preference number: 5 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFGSRGW*LGCLKT
Trigger: TGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCC...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TCTGGAAACATTTCTCCTGGGAGTGTGCTGTCAGCTCGTTTTCATAGTGCACATTTACAGAAAGTGTGTTaGAGTGGAGTTCTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: SGNISPGSVLSARFHSAHLQKVC*SGVLAV
Trigger: AACAGCCAGAACTCCACTCAAACACACTTTCTGTAA...ATGTGCACTATGAAAACGAGCTGACAGCACACTCCCAGGAGAAATGTTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TTTTGGAGAGGTCTAATTTGCTTTGTCCAGTTGGGGTGTGTGTGTGTACCTGATATCAATGTAGCAATGTaGCCAGGTAACTGCATCTAC +
Preference number: 5 (lower is better)
Translates to: FWRGLICFVQLGCVCVPDINVAM*PGNCIY
Trigger: GTAGATGCAGTTACCTGGCAACATTGCTACATTGAT...ATCAGGTACACACACACACCCCAACTGGACAAAGCAAATTAGACCTCTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATTGTGGTTGTGGTGGTTaGTGCAGTGAGCATAAATCC +
Preference number: 5 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHCGCGG*CSEHKS
Trigger: GGATTTATGCTCACTGCACAAACCACCACAACCACA...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTTGTCTACATTTTCCTTaGGGATGGATGTGGCCTACC +
Preference number: 5 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFCLHFP*GWMWPT
Trigger: GGTAGGCCACATCCATCCCAAAGGAAAATGTAGACA...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATTGTCTACATTTTCCTTaGGGATGGATGTGGCCTACC +
Preference number: 5 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHCLHFP*GWMWPT
Trigger: GGTAGGCCACATCCATCCCAAAGGAAAATGTAGACA...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AGCAGCAGCAGCAGGCTAAGGTTTGGATTTGTGGTTATAATGCTGTGTGACAGGGATGACTACTTTTTGTaGTGCCTAATAAACTGCTCT +
Preference number: 5 (lower is better)
Translates to: SSSSRLRFGFVVIMLCDRDDYFL*CLINCS
Trigger: AGAGCAGTTTATTAGGCACAACAAAAAGTAGTCATC...CCTGTCACACAGCATTATAACCACAAATCCAAACCTTAGCCTGCTGCTGCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp CTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATGCCTTTATTTGCTTTGTCCAGTaGGGGTGTGTGTGTGTACCT +
Preference number: 5 (lower is better)
Translates to: LVFIVHMKGNILLYTHAFICFVQ*GCVCVP
Trigger: AGGTACACACACACACCCCAACTGGACAAAGCAAAT...AAAGGCATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGGATAACAGTAGTACCCCTTTATCATGGGGTTACTAAGGACGCAAAGCAAACCTACCATTCCATAGTTTaGGCCAGATCTTCATTCTCT +
Preference number: 5 (lower is better)
Translates to: GITVVPLYHGVTKDAKQTYHSIV*ARSSFS
Trigger: AGAGAATGAAGATCTGGCCAAAACTATGGAATGGTA...GGTTTGCTTTGCGTCCTTAGTAACCCCATGATAAAGGGGTACTACTGTTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATCTGTTCCAGGAGTTATaGGGATTACGACGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDLFQEL*GLRRSA
Trigger: TGCACTGCGTCGTAATCCCAATAACTCCTGGAACAG...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GGATTTGTGGTTATAATGCTGTGTGACAGGATCATGGGGAGTTGTCTGGAAACAATTGTAATTTTACTTTaGAAGCACCCGCTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: GFVVIMLCDRIMGSCLETIVILL*KHPLPR
Trigger: TCTGGGAAGCGGGTGCTTCAAAAGTAAAATTACAAT...TGTTTCCAGACAACTCCCCATGATCCTGTCACACAGCATTATAACCACAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCTGGTCCGATAGTTATTaGGCTCATTACCCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFWSDSY*AHYPVP
Trigger: GGGAACTGGGTAATGAGCCAAATAACTATCGGACCA...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGAGCTCAAATAGGCTACTaGGGAAGAGGCAAAAAGGTT +
Preference number: 5 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGAQIGY*GRGKKV
Trigger: AACCTTTTTGCCTCTTCCCAAGTAGCCTATTTGAGC...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATAGACCCTCATGCCCCTaGAATCATATAGAACGTCCT +
Preference number: 5 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDRPSCP*NHIERP
Trigger: AGGACGTTCTATATGATTCAAGGGGCATGAGGGTCT...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp ACATGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATTCTCACTTTGCAGACTaGGCCCAAATCCTTAACTCC +
Preference number: 5 (lower is better)
Translates to: TCLYPYIGTGDVYIFLWDSHFAD*AQILNS
Trigger: GGAGTTAAGGATTTGGGCCAAGTCTGCAAAGTGAGA...ATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp CTCCTTCTAACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACACTTCCATCTCTCACTTaGCAGACTTGGCCCAAATCC +
Preference number: 5 (lower is better)
Translates to: LLLTKASFLSFILRKKITLPSLT*QTWPKS
Trigger: GGATTTGGGCCAAGTCTGCAAAGTGAGAGATGGAAG...TGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTTAGAAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TGTCAGCTCGTTTTCATAGTGCACATGAAGGGAAACATTCTGCTCTATACACATTTACAGAAAGTGTGTTaGAGTGGAGTTCTGGCTGTT +
Preference number: 5 (lower is better)
Translates to: CQLVFIVHMKGNILLYTHLQKVC*SGVLAV
Trigger: AACAGCCAGAACTCCACTCAAACACACTTTCTGTAA...ATGTGTATAGAGCAGAATGTTTCCCTTCATGTGCACTATGAAAACGAGCTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GACTACTTTTTGTTGTGCCTAATAAACTGCTCTCCACTCAATGAATATTGTTACTGTGGTTGTGGTGGTTaGTGCAGTGAGCATAAATCC +
Preference number: 5 (lower is better)
Translates to: DYFLLCLINCSPLNEYCYCGCGG*CSEHKS
Trigger: GGATTTATGCTCACTGCACAAACCACCACAACCACA...GTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp GACTACTTTTTGTTGTGCCTAATAAACTGCTCTCCACTCAATGAATATTGTTACTTGGAGAGGTCTAATTaGCTTTGTCCAGTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: DYFLLCLINCSPLNEYCYLERSN*LCPVGV
Trigger: CACCCCAACTGGACAAAGCAAATTAGACCTCTCCAA...GTAACAATATTCATTGAGTGGAGAGCAGTTTATTAGGCACAACAAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp CTTCATTCTCTAGATTCCCTATTCTCTCCCAAAATGGCTAACAAAGTTTTGTTCCACAAACAGCAGAAATaGTATCACCGTCTCACTTGG +
Preference number: 5 (lower is better)
Translates to: LHSLDSLFSPKMANKVLFHKQQK*YHRLTW
Trigger: CCAAGTGAGACGGTGATACAATTTCTGCTGTTTGTG...GAACAAAACTTTGTTAGCCATTTTGGGAGAGAATAGGGAATCTAGAGAATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp AACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACATCCACAGAGCTCAAATAGGCTACTaGGGAAGAGGCAAAAAGGTT +
Preference number: 5 (lower is better)
Translates to: NKSIIPVIYPEKENHIHRAQIGY*GRGKKV
Trigger: AACCTTTTTGCCTCTTCCCAAGTAGCCTATTTGAGC...TCTGTGGATGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp CTCCTTCTAACAAAAGCATCATTCCTGTCATTTATCCTGAGAAAGAAAATCACAGTATCACCGTCTCACTaGGAACAGTGTCAAATCTCT +
Preference number: 5 (lower is better)
Translates to: LLLTKASFLSFILRKKITVSPSH*EQCQIS
Trigger: AGAGATTTGACACTGTTCCAAGTGAGACGGTGATAC...TGTGATTTTCTTTCTCAGGATAAATGACAGGAATGATGCTTTTGTTAGAAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370552.8
ENST00000404542.5
CDS-3UTR CAA 90 bp TGCCTTTATCCTTATATAGGTACAGGTGATGTCTACATTTTCCTTTGGGATGGATGGTCCGATAGTTATTaGGCTCATCCTCATAGTTTT +
Preference number: 5 (lower is better)
Translates to: CLYPYIGTGDVYIFLWDGWSDSY*AHPHSF
Trigger: AAAACTATGAGGATGAGCCAAATAACTATCGGACCA...TCCATCCCAAAGGAAAATGTAGACATCACCTGTACCTATATAAGGATAAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628193.2
CDS GCA 72 bp CGGCCAGGCCGTGGCTTCCGCTGGAGCCCAGCCACATaGACAGCCAAGACTTTGGGGCCGATCAGGCGCTTG +
Preference number: 6 (lower is better)
Translates to: RPGRGFRWSPAT*TAKTLGPIRRL
Trigger: CAAGCGCCTGATCGGCCCCAAAGTCTTGGCTGTGCATGTGGCTGGGCTCCAGCGGAAGCCACGGCCTGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS CAA 90 bp TTCGCCGGGTTCCTCAGGTTCTGGAACTGCAGGAAGTCGGTCCTTTaGCCCCCGAAGCGCAGAAAGGCGGGCGAAAGTCCCCGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: FAGFLRFWNCRKSVL*PPKRRKAGESPRAR
Trigger: CCTGGCCCGGGGACTTTCGCCCGCCTTTCTGCGCTTCGGGGGCAAAAGGACCGACTTCCTGCAGTTCCAGAACCTGAGGAACCCGGCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000614306.1
ENST00000628193.2
CDS GCA 72 bp TCCTCAGGTTCTGGAACTGCAGGAAGTCGGTCCTTTTaGCCCCGAAGCGCAGAAAGGCGGGCGAAAGTCCCC +
Preference number: 6 (lower is better)
Translates to: SSGSGTAGSRSF*PRSAERRAKVP
Trigger: GGGGACTTTCGCCCGCCTTTCTGCGCTTCGGGGGCAAAAGGACCGACTTCCTGCAGTTCCAGAACCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000614306.1
ENST00000628193.2
CDS CAA 72 bp TTCCTCAGGTTCTGGAACTGCAGGAAGTCGGTCCTTTaGCCCCCGAAGCGCAGAAAGGCGGGCGAAAGTCCC +
Preference number: 6 (lower is better)
Translates to: FLRFWNCRKSVL*PPKRRKAGESP
Trigger: GGGACTTTCGCCCGCCTTTCTGCGCTTCGGGGGCAAAAGGACCGACTTCCTGCAGTTCCAGAACCTGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000614306.1
ENST00000628193.2
CDS CCA 72 bp TCTGGGAGGGTCCCGTCGTCCACCATCACTAAGGGCTaGCCATTCAGTTGCACTGACTTGGACTTTAGGCCC +
Preference number: 6 (lower is better)
Translates to: SGRVPSSTITKG*PFSCTDLDFRP
Trigger: GGGCCTAAAGTCCAAGTCAGTGCAACTGAATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS GCA 72 bp GGCTCTTCAGCTGGATGTAATCCTTTCCCAACTGGCTaGCATTTACTGCCCGGCCATGCATGGTCCGATAGT +
Preference number: 6 (lower is better)
Translates to: GSSAGCNPFPTG*HLLPGHAWSDS
Trigger: ACTATCGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAAAGGATTACATCCAGCTGAAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS TCA 72 bp AAGCGCTTGGAGCTTAGGAAATCGAGCCAGCCATCATaGATGATGGACGGATCCAGCTGCAGAGAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: KRLELRKSSQPS*MMDGSSCRERK
Trigger: CTTCCTCTCTCTGCAGCTGGATCCGTCCATCATTCATGATGGCTGGCTCGATTTCCTAAGCTCCAAGCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000614306.1
ENST00000628193.2
CDS TCA 72 bp TGGTCCGATAGTTATTTGGCTCATCCTCATAGTTTTTaGGATAGTAATCCGGGCCCGGGCCCCCGCGGCTTT +
Preference number: 6 (lower is better)
Translates to: WSDSYLAHPHSF*DSNPGPGPRGF
Trigger: AAAGCCGCGGGGGCCCGGGCCCGGATTACTATCTCAAAAACTATGAGGATGAGCCAAATAACTATCGGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000628193.2
CDS CCA 72 bp TTCCCAACTGGCTGCCATTTACTGCCCGGCCATGCATaGTCCGATAGTTATTTGGCTCATTACCCAGTTCCC +
Preference number: 6 (lower is better)
Translates to: FPTGCHLLPGHA*SDSYLAHYPVP
Trigger: GGGAACTGGGTAATGAGCCAAATAACTATCGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370546.5
ENST00000370552.8
ENST00000404542.5
CDS TCA 72 bp GCTTGGAGCTTAGGAAATCGAGCCAGCCATCATGAATaGTGGACGGATCCAGCTGCAGAGAGAGGAAGTTCT +
Preference number: 6 (lower is better)
Translates to: AWSLGNRASHHE*WTDPAAERGSS
Trigger: AGAACTTCCTCTCTCTGCAGCTGGATCCGTCCATCATTCATGATGGCTGGCTCGATTTCCTAAGCTCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000614306.1
ENST00000628193.2
CDS TCA 72 bp CAACATCACTTCGAACAATGTCATCCTCATAGTTTTTaGGATAGTAATCCGGGCCCGGGCCCCCGCGGCTTT +
Preference number: 6 (lower is better)
Translates to: QHHFEQCHPHSF*DSNPGPGPRGF
Trigger: AAAGCCGCGGGGGCCCGGGCCCGGATTACTATCTCAAAAACTATGAGGATGACATTGTTCGAAGTGATGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
CDS TCA 72 bp TGTCTAACAGGCGAGTTTTCAGGAAGTCCATCACCTTaGCCACCCGGCCATCAATGTAGCAATGTTGCCAGG +
Preference number: 6 (lower is better)
Translates to: CLTGEFSGSPSP*PPGHQCSNVAR
Trigger: CCTGGCAACATTGCTACATTGATGGCCGGGTGGTCAAGGTGATGGACTTCCTGAAAACTCGCCTGTTAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS GCA 72 bp CTGGATGTAATCCTTTCCCAACTGGCTGCCATTTACTaGCCGGCCATGCATGGTCCGATAGTTATTTGGCTC +
Preference number: 6 (lower is better)
Translates to: LDVILSQLAAIY*PAMHGPIVIWL
Trigger: GAGCCAAATAACTATCGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAAAGGATTACATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS GCA 72 bp AGAATCCTGCAGCATAGGAATCGGATAGATTGTTTGTaGCTCCAGCTGAGGTGGTCACCACACCTTCAAGCC +
Preference number: 6 (lower is better)
Translates to: RILQHRNRIDCL*LQLRWSPHLQA
Trigger: GGCTTGAAGGTGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTATCCGATTCCTATGCTGCAGGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS GCA 72 bp GCCTTCTCCCTTTGGAGCTCCAGCATAACATCAGGGTaGTGGGCAATCTTGCAGCCTTTCTGTTTATCTAAG +
Preference number: 6 (lower is better)
Translates to: AFSLWSSSITSG*WAILQPFCLSK
Trigger: CTTAGATAAACAGAAAGGCTGCAAGATTGCCCAGCACCCTGATGTTATGCTGGAGCTCCAAAGGGAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
CDS TCA 72 bp TCAGGGAAGGCACAAAGCACCCTCATTCAATCCCTCTaGTTTAAACCTCTCTTCCTACTGGGTCTCGCTAGT +
Preference number: 6 (lower is better)
Translates to: SGKAQSTLIQSL*FKPLFLLGLAS
Trigger: ACTAGCGAGACCCAGTAGGAAGAGAGGTTTAAATCAGAGGGATTGAATGAGGGTGCTTTGTGCCTTCCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370549.5
ENST00000370552.8
ENST00000628193.2
CDS CCA 72 bp TTCTCCCTTTGGAGCTCCAGCATAACATCAGGGTGCTaGGCAATCTTGCAGCCTTTCTGTTTATCTAAGGCA +
Preference number: 6 (lower is better)
Translates to: FSLWSSSITSGC*AILQPFCLSKA
Trigger: TGCCTTAGATAAACAGAAAGGCTGCAAGATTGCCCAGCACCCTGATGTTATGCTGGAGCTCCAAAGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
CDS CCA 72 bp TTCCCAACTGGCTGCCATTTACTGCCCGGCCATGCATaGTCCGATAGTTATTTGGCTCATCCTCATAGTTTT +
Preference number: 6 (lower is better)
Translates to: FPTGCHLLPGHA*SDSYLAHPHSF
Trigger: AAAACTATGAGGATGAGCCAAATAACTATCGGACCATGCATGGCCGGGCAGTAAATGGCAGCCAGTTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628193.2
CDS CAA 90 bp AGCTGCAGAGAGAGGAAGTTCTCATTGACTGTCCTGACTGGGTTCTaGGTGCTCACATCAAGTAGAATCAGGGTCTTTTCCTTCAAACCT +
Preference number: 6 (lower is better)
Translates to: SCRERKFSLTVLTGF*VLTSSRIRVFSFKP
Trigger: AGGTTTGAAGGAAAAGACCCTGATTCTACTTGATGTGAGCACCAAGAACCCAGTCAGGACAGTCAATGAGAACTTCCTCTCTCTGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000614306.1
ENST00000628193.2
CDS CAA 90 bp TTCTCCCTTTGGAGCTCCAGCATAACATCAGGGTGCTGGGCAATCTaGCAGCCTTTCTGTTTATCTAAGGCAACATCACTTCGAACAATG +
Preference number: 6 (lower is better)
Translates to: FSLWSSSITSGCWAI*QPFCLSKATSLRTM
Trigger: CATTGTTCGAAGTGATGTTGCCTTAGATAAACAGAAAGGCTGCAAGATTGCCCAGCACCCTGATGTTATGCTGGAGCTCCAAAGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
CDS CAA 90 bp TGTTCAACCATAAGAATCCTGCAGCATAGGAATCGGATAGATTGTTaGTGCCTCCAGCTGAGGTGGTCACCACACCTTCAAGCCAAATCT +
Preference number: 6 (lower is better)
Translates to: CSTIRILQHRNRIDC*CLQLRWSPHLQAKS
Trigger: AGATTTGGCTTGAAGGTGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTATCCGATTCCTATGCTGCAGGATTCTTATGGTTGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS TCA 72 bp TTGGAGAATTGCTCCTTTAGAAGAACCAGATGCATCTaGGCTGCCTTCTCCCTTTGGAGCTCCAGCATAACA +
Preference number: 6 (lower is better)
Translates to: LENCSFRRTRCI*AAFSLWSSSIT
Trigger: TGTTATGCTGGAGCTCCAAAGGGAGAAGGCAGCTCAGATGCATCTGGTTCTTCTAAAGGAGCAATTCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
CDS CAA 72 bp GAGAGGAAGTTCTCATTGACTGTCCTGACTGGGTTCTaGGTGCTCACATCAAGTAGAATCAGGGTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: ERKFSLTVLTGF*VLTSSRIRVFS
Trigger: GGAAAAGACCCTGATTCTACTTGATGTGAGCACCAAGAACCCAGTCAGGACAGTCAATGAGAACTTCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000614306.1
ENST00000628193.2
CDS CAA 72 bp TGGAGCTCCAGCATAACATCAGGGTGCTGGGCAATCTaGCAGCCTTTCTGTTTATCTAAGGCAACATCACTT +
Preference number: 6 (lower is better)
Translates to: WSSSITSGCWAI*QPFCLSKATSL
Trigger: AAGTGATGTTGCCTTAGATAAACAGAAAGGCTGCAAGATTGCCCAGCACCCTGATGTTATGCTGGAGCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
CDS CAA 72 bp ATAAGAATCCTGCAGCATAGGAATCGGATAGATTGTTaGTGCCTCCAGCTGAGGTGGTCACCACACCTTCAA +
Preference number: 6 (lower is better)
Translates to: IRILQHRNRIDC*CLQLRWSPHLQ
Trigger: TTGAAGGTGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTATCCGATTCCTATGCTGCAGGATTCTTAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2
CDS CAA 90 bp CTGTACTTCAACAGACTCAGGGCACTAGAACTGTTCCAGGAGTTATaGGGATTACGACGCAGTGCATTTAGAGCAAATATCAGGTGGAGT +
Preference number: 6 (lower is better)
Translates to: LYFNRLRALELFQEL*GLRRSAFRANIRWS
Trigger: ACTCCACCTGATATTTGCTCTAAATGCACTGCGTCGTAATCCCAATAACTCCTGGAACAGTTCTAGTGCCCTGAGTCTGTTGAAGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370546.5
ENST00000370552.8
ENST00000404542.5
CDS CAA 72 bp AACAGACTCAGGGCACTAGAACTGTTCCAGGAGTTATaGGGATTACGACGCAGTGCATTTAGAGCAAATATC +
Preference number: 6 (lower is better)
Translates to: NRLRALELFQEL*GLRRSAFRANI
Trigger: GATATTTGCTCTAAATGCACTGCGTCGTAATCCCAATAACTCCTGGAACAGTTCTAGTGCCCTGAGTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370546.5
ENST00000370552.8
ENST00000404542.5
CDS CCA 72 bp AAAATGAGTGCCGTATCACGACATCAATGCCCTGATTaGCCAGCATTCCTAAAGTGTTCAACCATAAGAATC +
Preference number: 6 (lower is better)
Translates to: KMSAVSRHQCPD*PAFLKCSTIRI
Trigger: GATTCTTATGGTTGAACACTTTAGGAATGCTGGCCAATCAGGGCATTGATGTCGTGATACGGCACTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370546.5
ENST00000370549.5
ENST00000370552.8
ENST00000404542.5
ENST00000628193.2