Pregenerated sensors for HP (Homo sapiens)

Ensembl gene IDs: ENSG00000257017

Ensembl transcript IDs: ENST00000565807.6, ENST00000566821.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TGGAAGAGAACTGGTGTCCAAAAGCAGGACGGTGGCCATGGGCATTaGCCCACAGGTGCCGTCTGCCAGTTCACCATCTCACTAACAAAT	+
Preference number: 5 (lower is better) Translates to: WKRTGVQKQDGGHGH*PTGAVCQFTISLTN Trigger: ATTTGTTAGTGAGATGGTGAACTGGCAGACGGCACCTGTGGGTCAATGCCCATGGCCACCGTCCTGCTTTTGGACACCAGTTCTCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566821.1
CDS GCA 90 bp	GCTAGTCTCCCTGCTTCACAGCACATGCATGCATCCACACACACATaGATGTACACACACACACACACACATGCATACACACACACTCCT	+
Preference number: 5 (lower is better) Translates to: ASLPASQHMHASTHT*MYTHTHTHAYTHTP Trigger: AGGAGTGTGTGTGTATGCATGTGTGTGTGTGTGTGTGTACATGCATGTGTGTGTGGATGCATGCATGTGCTGTGAAGCAGGGAGACTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566821.1
CDS CAA 72 bp	AACTGGTGTCCAAAAGCAGGACGGTGGCCATGGGCATaGACCCACAGGTGCCGTCTGCCAGTTCACCATCTC	+
Preference number: 6 (lower is better) Translates to: NWCPKAGRWPWA*THRCRLPVHHL Trigger: GAGATGGTGAACTGGCAGACGGCACCTGTGGGTCAATGCCCATGGCCACCGTCCTGCTTTTGGACACCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566821.1
CDS GCA 72 bp	AAAGCAGGACGGTGGCCATGGGCATTGACCCACAGGTaGCGTCTGCCAGTTCACCATCTCACTAACAAATGC	+
Preference number: 6 (lower is better) Translates to: KAGRWPWALTHR*RLPVHHLTNKC Trigger: GCATTTGTTAGTGAGATGGTGAACTGGCAGACGGCACCTGTGGGTCAATGCCCATGGCCACCGTCCTGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566821.1
CDS CAA 90 bp	CTGGAAGAGAACTGGTGTCCAAAAGCAGGACGGTGGCCATGGGCATaGACCCACAGGTGCCGTCTGCCAGTTCACCATCTCACTAACAAA	+
Preference number: 6 (lower is better) Translates to: LEENWCPKAGRWPWA*THRCRLPVHHLTNK Trigger: TTTGTTAGTGAGATGGTGAACTGGCAGACGGCACCTGTGGGTCAATGCCCATGGCCACCGTCCTGCTTTTGGACACCAGTTCTCTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566821.1
CDS TCA 72 bp	AGGAGGCAGACAGGAAGGGAGAAAGGAGAGAGAATATaGGAAGGAGGAAGGGAAAGAGTGCTGTGCTGGAAG	+
Preference number: 6 (lower is better) Translates to: RRQTGREKGERI*EGGRERVLCWK Trigger: CTTCCAGCACAGCACTCTTTCCCTTCCTCCTTCTCATATTCTCTCTCCTTTCTCCCTTCCTGTCTGCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565807.6
CDS GCA 72 bp	CACACACACATGCATGTACACACACACACACACACATaGATACACACACACTCCTCCCACTTAGCAGCCAGA	+
Preference number: 6 (lower is better) Translates to: HTHMHVHTHTHT*IHTHSSHLAAR Trigger: TCTGGCTGCTAAGTGGGAGGAGTGTGTGTGTATGCATGTGTGTGTGTGTGTGTGTACATGCATGTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566821.1
CDS TCA 72 bp	ATAAACTCTGTTCAGAGGGATACTGTGAGGACTAAGTaGGCAAATAAGTATAAAGCCCTTAGAGCAGTGCCA	+
Preference number: 6 (lower is better) Translates to: INSVQRDTVRTK*ANKYKALRAVP Trigger: TGGCACTGCTCTAAGGGCTTTATACTTATTTGCTCACTTAGTCCTCACAGTATCCCTCTGAACAGAGTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565807.6

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