Pregenerated sensors for HOXC10 (Homo sapiens)
Ensembl gene IDs: ENSG00000180818Ensembl transcript IDs: ENST00000303460.5, ENST00000513413.2, ENST00000515593.1
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGAGGGCACACACCACACCCCACATCCCGGCACCCCATTTCTCATaGTTTAAGTGGAAGCATCTTCGCAGCACGAACCACAGGTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: MRAHTTPHIPAPHFS*FKWKHLRSTNHRSL Trigger: AAGGGACCTGTGGTTCGTGCTGCGAAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGCCGGGATGTGGGGTGTGGTGTGTGCCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR CCA 90 bp | CACACCACACCCCACATCCCGGCACCCCATTTCTCATGCTTTAAGTaGAAGCATCTTCGCAGCACGAACCACAGGTCCCTTGGAAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: HTTPHIPAPHFSCFK*KHLRSTNHRSLGRR Trigger: TCTCCTTCCAAGGGACCTGTGGTTCGTGCTGCGAAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGCCGGGATGTGGGGTGTGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR GCA 90 bp | GACTGGGAGGTAAAGACATGGAGAGGGTTTGGTGGAGGCTCTGGGTaGTACGACAAACACACGAACACTAGCCGAACTTTCCAAAACGTC | + |
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Preference number: 1 (lower is better) Translates to: DWEVKTWRGFGGGSG*YDKHTNTSRTFQNV Trigger: GACGTTTTGGAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGTCTTTACCTCCCAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR GCA 90 bp | ACACTAGCCGAACTTTCCAAAACGTCTATTAGTCTAAGGAGGAAATaGAGCAAGGAAGGAACGATTCTGCCTGTGCTCTGCGAGATTACA | + |
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Preference number: 1 (lower is better) Translates to: TLAELSKTSISLRRK*SKEGTILPVLCEIT Trigger: TGTAATCTCGCAGAGCACAGGCAGAATCGTTCCTTCCTTGCTGCATTTCCTCCTTAGACTAATAGACGTTTTGGAAAGTTCGGCTAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR-3UTR GCA 90 bp | AGCCACACTCCCACCCCCATCTATGAGGGCACACACCACACCCCACATCCCGGCTTTTTGCAGTCGCATTaGATTTATACTCAGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SHTPTPIYEGTHHTPHPGFLQSH*IYTQGG Trigger: TCCTCCCTGAGTATAAATGCAATGCGACTGCAAAAA...GCCGGGATGTGGGGTGTGGTGTGTGCCCTCATAGATGGGGGTGGGAGTGTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR-3UTR TCA 90 bp | CCCCTACAAGCGGATGGATTCGATCTTAACTTTGCATGGAGAACAGAATGCTGTTCCCACCCCCATCTATaGGGGCACACACCACACCCC | + |
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Preference number: 2 (lower is better) Translates to: PLQADGFDLNFAWRTECCSHPHL*GHTPHP Trigger: GGGGTGTGGTGTGTGCCCTCATAGATGGGGGTGGGA...ACAGCATTCTGTTCTCCATGCAAAGTTAAGATCGAATCCATCCGCTTGTAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGGAACGATTCTGCCTGTGCTCTGCGAGATTACAGACCCTCTCTGGTTAGAACCACAGGTCCCTTaGAAGGAGAGTCTGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: KEGTILPVLCEITDPLWLEPQVP*KESLRS Trigger: AGACCTCAGACTCTCCTTCCAAGGGACCTGTGGTTC...TAACCAGAGAGGGTCTGTAATCTCGCAGAGCACAGGCAGAATCGTTCCTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR-3UTR GCA 90 bp | GCTACGACAAACACACGAACACTAGCCGAACTTTCCAAAACGTCTATTAGTCTAGAACGATTCTGCCTGTaGTCTGCGAGATTACAGACC | + |
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Preference number: 2 (lower is better) Translates to: ATTNTRTLAELSKTSISLERFCL*SARLQT Trigger: GGTCTGTAATCTCGCAGAGCACAGGCAGAATCGTTC...TAGACTAATAGACGTTTTGGAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR-3UTR GCA 90 bp | GCTACGACAAACACACGAACACTAGCCGAACTTTCCAAAACGTCTATTAGTCTAGCACCCCATTTCTCATaGTTTAAGTGGAAGCATCTT | + |
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Preference number: 2 (lower is better) Translates to: ATTNTRTLAELSKTSISLAPHFS*FKWKHL Trigger: AAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGC...TAGACTAATAGACGTTTTGGAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR TCA 72 bp | GGAGAACAGAATGCTGTGTGTGAGTGCGTGGGTGAGTaGGGGCTTGACACACACACCAGCCACACTCCCACC | + |
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Preference number: 3 (lower is better) Translates to: GEQNAVCECVGE*GLDTHTSHTPT Trigger: GGTGGGAGTGTGGCTGGTGTGTGTGTCAAGCCCTCACTCACCCACGCACTCACACACAGCATTCTGTTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR-3UTR CAA 90 bp | GGAGGTAAAGACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACGAACCACAGGTCCCTaGGAAGGAGAGTCTGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: GGKDMERVWWRLWVLRQTRTTGP*EGESEV Trigger: GACCTCAGACTCTCCTTCCAAGGGACCTGTGGTTCG...TGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGTCTTTACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR-3UTR CAA 90 bp | GGAGGTAAAGACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACATGGGTGAGTGAGGGCTaGACACACACACCAGCCACA | + |
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Preference number: 3 (lower is better) Translates to: GGKDMERVWWRLWVLRQTWVSEG*THTPAT Trigger: TGTGGCTGGTGTGTGTGTCAAGCCCTCACTCACCCA...TGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGTCTTTACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR GCA 72 bp | CACACCACACCCCACATCCCGGCACCCCATTTCTCATaGTTTAAGTGGAAGCATCTTCGCAGCACGAACCAC | + |
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Preference number: 3 (lower is better) Translates to: HTTPHIPAPHFS*FKWKHLRSTNH Trigger: GTGGTTCGTGCTGCGAAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGCCGGGATGTGGGGTGTGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR GCA 72 bp | GTAAAGACATGGAGAGGGTTTGGTGGAGGCTCTGGGTaGTACGACAAACACACGAACACTAGCCGAACTTTC | + |
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Preference number: 3 (lower is better) Translates to: VKTWRGFGGGSG*YDKHTNTSRTF Trigger: GAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGTCTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| 3UTR-3UTR CAA 90 bp | GGAGGTAAAGACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACAAGGTCTTTGCCTTTTTaGCAGTCGCATTGCATTTAT | + |
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Preference number: 3 (lower is better) Translates to: GGKDMERVWWRLWVLRQTRSLPF*QSHCIY Trigger: ATAAATGCAATGCGACTGCAAAAAAGGCAAAGACCT...TGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGTCTTTACCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR TCA 90 bp | ACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTGTTCGGCGCGCGGGTTaGGACTGGCCCGCTGCTCGA | + |
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Preference number: 4 (lower is better) Translates to: TWRGFGGGSGCYDKHTNTVRRAG*DWPAAR Trigger: TCGAGCAGCGGGCCAGTCTCAACCCGCGCGCCGAAC...AGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | ACCAGGCACAAAGGGAGGAGGGGCGGGGAGAGGAAGGAGCGGGAAGGGAGGAGGATTCTGCCTGTGCTCTaGGAGATTACAGACCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: TRHKGRRGGERKEREGRRILPVL*EITDPL Trigger: GAGAGGGTCTGTAATCTCGCAGAGCACAGGCAGAAT...CCTCCTCCCTTCCCGCTCCTTCCTCTCCCCGCCCCTCCTCCCTTTGTGCCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | AGCCACACTCCCACCCCCATCTATGAGGGCACACACCACACCCCACATCCCGGCGGTGGAGGCTCTGGGTaGTACGACAAACACACGAAC | + |
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Preference number: 4 (lower is better) Translates to: SHTPTPIYEGTHHTPHPGGGGSG*YDKHTN Trigger: GTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACC...GCCGGGATGTGGGGTGTGGTGTGTGCCCTCATAGATGGGGGTGGGAGTGTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | AGCCACACTCCCACCCCCATCTATGAGGGCACACACCACACCCCACATCCCGGCCAGACTGCATATACATaGCTGCGCTCCGGCTATAGC | + |
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Preference number: 4 (lower is better) Translates to: SHTPTPIYEGTHHTPHPGQTAYT*LRSGYS Trigger: GCTATAGCCGGAGCGCAGGCATGTATATGCAGTCTG...GCCGGGATGTGGGGTGTGGTGTGTGCCCTCATAGATGGGGGTGGGAGTGTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | ACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTGGCACGGGTACCTCGTaGTCCCCAAGGCAGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: TWRGFGGGSGCYDKHTNTGTGTS*SPRQDS Trigger: GGAGTCCTGCCTTGGGGAGCACGAGGTACCCGTGCC...AGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | CCACACCCCACATCCCGGCACCCCATTTCTCATGCTTTAAGTGGAAGCATCTTCGGCGATAGGCGGCTTTaGGGTCGCCCCAGGAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PHPTSRHPISHALSGSIFGDRRL*GRPRSP Trigger: TGGACTCCTGGGGCGACCCCAAAGCCGCCTATCGCC...GAAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGCCGGGATGTGGGGTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR TCA 90 bp | CCCACATCCCGGCACCCCATTTCTCATGCTTTAAGTGGAAGCATCTTCGCAGCATCCCACCCCCATCTATaGGGGCACACACCACACCCC | + |
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Preference number: 4 (lower is better) Translates to: PTSRHPISHALSGSIFAASHPHL*GHTPHP Trigger: GGGGTGTGGTGTGTGCCCTCATAGATGGGGGTGGGA...TGCTGCGAAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGCCGGGATGTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | TTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTAGCCGAACTTTCCGAGGCTGGGGCTGCTaGCCTCGTCCCTCTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FGGGSGCYDKHTNTSRTFRGWGC*PRPSWR Trigger: TCTCCAAGAGGGACGAGGGCAGCAGCCCCAGCCTCG...GAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | CCCCACATCCCGGCACCCCATTTCTCATGCTTTAAGTGGAAGCATCTTCGCAGCAGGAGGACAGCGGCCTaGCAACAGGTTGTTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PHIPAPHFSCFKWKHLRSRRTAA*QQVVPG Trigger: GCCTGGAACAACCTGTTGGCAGGCCGCTGTCCTCCT...GCTGCGAAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGCCGGGATGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | TTAAGTGGAAGCATCTTCGCAGCACGAACCACAGGTCCCTTGGAAGGAGAGTCTCGGAGTAGCTCGGGCTaGCGCGGTAGTAGCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LSGSIFAARTTGPLEGESRSSSG*RGSSWA Trigger: TGCCCAGCTACTACCGCGCCAGCCCGAGCTACTCCG...AGACTCTCCTTCCAAGGGACCTGTGGTTCGTGCTGCGAAGATGCTTCCACTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | ACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTTTGGCCCCAGAACAGTaGGGCGTCTTGTCCAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: TWRGFGGGSGCYDKHTNTLAPEQ*GVLSSA Trigger: CGCGCTGGACAAGACGCCCCACTGTTCTGGGGCCAA...AGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | ACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTGGGCTTCGAAGTCGTTaGCCCCAGAACAGTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: TWRGFGGGSGCYDKHTNTGLRSR*PQNSGA Trigger: CGCCCCACTGTTCTGGGGCCAACGACTTCGAAGCCC...AGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR TCA 90 bp | GAGGTAAAGACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACGAGTGCGTGGGTGAGTaGGGGCTTGACACACACACC | + |
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Preference number: 4 (lower is better) Translates to: EVKTWRGFGGGSGCYDKHECVGE*GLDTHT Trigger: GGTGTGTGTGTCAAGCCCTCACTCACCCACGCACTC...GTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGTCTTTACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | GAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTAGCCGAAGGGCCCGCCAGGCTCTaGTCCGTCTTGATTTCATTG | + |
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Preference number: 4 (lower is better) Translates to: EGLVEALGATTNTRTLAEGPARL*SVLISL Trigger: CAATGAAATCAAGACGGAGCAGAGCCTGGCGGGCCC...TTCGGCTAGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR TCA 90 bp | TTAAGTGGAAGCATCTTCGCAGCACGAACCACAGGTCCCTTGGAAGGAGAGTCTGGCTCTGCTCCGTCTTaGTTTCATTGGGGCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LSGSIFAARTTGPLEGESGSAPS*FHWGWG Trigger: CCCCCAGCCCCAATGAAATCAAGACGGAGCAGAGCC...AGACTCTCCTTCCAAGGGACCTGTGGTTCGTGCTGCGAAGATGCTTCCACTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | GAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTAGCCGAATTTCGCCCGCTTCTCTaGGCTGTACATGCAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: EGLVEALGATTNTRTLAEFRPLL*AVHAAD Trigger: GTCTGCTGCATGTACAGCGCAGAGAAGCGGGCGAAA...TTCGGCTAGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | TTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTAGCCGAACTTTCGTGGGAGTAGAGAGCTaGCTCGGGGCCACTTTTCGC | + |
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Preference number: 4 (lower is better) Translates to: FGGGSGCYDKHTNTSRTFVGVES*LGATFR Trigger: GCGAAAAGTGGCCCCGAGGCAGCTCTCTACTCCCAC...GAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | CCCCACATCCCGGCACCCCATTTCTCATGCTTTAAGTGGAAGCATCTTCGCAGCCAGGGAAACTCACTTTaGCCCCCAGCTGAGGCGATT | + |
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Preference number: 4 (lower is better) Translates to: PHIPAPHFSCFKWKHLRSQGNSL*PPAEAI Trigger: AATCGCCTCAGCTGGGGGGCAAAGTGAGTTTCCCTG...GCTGCGAAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGCCGGGATGTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | CCCCTACAAGCGGATGGATTCGATCTTAACTTTGCATGGAGAACAGAATGCTGTTGCCCTCGTCCCTCTTaGAGAGCGAGGGCGCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PLQADGFDLNFAWRTECCCPRPS*RARARA Trigger: GGCTCGCGCCCTCGCTCTCCAAGAGGGACGAGGGCA...ACAGCATTCTGTTCTCCATGCAAAGTTAAGATCGAATCCATCCGCTTGTAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | GAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTAGCCGAATCTGGCTGTCGGACTTaGGGGTCTCAGGGAAACTCA | + |
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Preference number: 4 (lower is better) Translates to: EGLVEALGATTNTRTLAESGCRT*GSQGNS Trigger: TGAGTTTCCCTGAGACCCCCAAGTCCGACAGCCAGA...TTCGGCTAGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR TCA 90 bp | CCCCACATCCCGGCACCCCATTTCTCATGCTTTAAGTGGAAGCATCTTCGCAGCTCATCACCCCGCAATTaGAGTCACTCCCAGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: PHIPAPHFSCFKWKHLRSSSPRN*SHSQTA Trigger: TGCAGTCTGGGAGTGACTTCAATTGCGGGGTGATGA...GCTGCGAAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGCCGGGATGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR TCA 90 bp | CCCCTACAAGCGGATGGATTCGATCTTAACTTTGCATGGAGAACAGAATGCTGTAGGACGGATAGGTGTTaGGGGCGAGGCTGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PLQADGFDLNFAWRTECCRTDRC*GRGWGC Trigger: GCAGCCCCAGCCTCGCCCTCAACACCTATCCGTCCT...ACAGCATTCTGTTCTCCATGCAAAGTTAAGATCGAATCCATCCGCTTGTAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | AGCATCTTCGCAGCACGAACCACAGGTCCCTTGGAAGGAGAGTCTGAGGTCTTTCTGCATATACATGCCTaGGCTCCGGCTATAGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: SIFAARTTGPLEGESEVFLHIHA*APAIAL Trigger: GAGCGCTATAGCCGGAGCGCAGGCATGTATATGCAG...AAAGACCTCAGACTCTCCTTCCAAGGGACCTGTGGTTCGTGCTGCGAAGATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | GAGGTAAAGACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACTGGAGTCGGCAGCTTTaGCCCTCTCCTTTTCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: EVKTWRGFGGGSGCYDKHWSRQL*PSPFRS Trigger: AGAGCGAAAAGGAGAGGGCCAAAGCTGCCGACTCCA...GTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGTCTTTACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | AGCATCTTCGCAGCACGAACCACAGGTCCCTTGGAAGGAGAGTCTGAGGTCTTTGTTATCCGAGGTGTCTaGGCTGGAGTCGGCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SIFAARTTGPLEGESEVFVIRGV*AGVGSF Trigger: AAAGCTGCCGACTCCAGCCCAGACACCTCGGATAAC...AAAGACCTCAGACTCTCCTTCCAAGGGACCTGTGGTTCGTGCTGCGAAGATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | ACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTGACATGGAGAGGGTTTaGTGGAGGCTCTGGGTGCTA | + |
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Preference number: 4 (lower is better) Translates to: TWRGFGGGSGCYDKHTNTDMERV*WRLWVL Trigger: TAGCACCCAGAGCCTCCACCAAACCCTCTCCATGTC...AGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | ACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTGAACCACAGGTCCCTTaGAAGGAGAGTCTGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TWRGFGGGSGCYDKHTNTEPQVP*KESLRS Trigger: AGACCTCAGACTCTCCTTCCAAGGGACCTGTGGTTC...AGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | TTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTAGCCGAACTTTCCTGTGTGTGAGTGCGTaGGTGAGTGAGGGCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: FGGGSGCYDKHTNTSRTFLCVSA*VSEGLT Trigger: TGTCAAGCCCTCACTCACCCACGCACTCACACACAG...GAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | GGAGGTAAAGACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACAGTTTGGTGGAGGCTCTaGGTGCTACGACAAACACAC | + |
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Preference number: 4 (lower is better) Translates to: GGKDMERVWWRLWVLRQTVWWRL*VLRQTH Trigger: GTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAAC...TGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGTCTTTACCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CCA 90 bp | AGCATCTTCGCAGCACGAACCACAGGTCCCTTGGAAGGAGAGTCTGAGGTCTTTTGGGAGGTAAAGACATaGAGAGGGTTTGGTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SIFAARTTGPLEGESEVFWEVKT*RGFGGG Trigger: GCCTCCACCAAACCCTCTCCATGTCTTTACCTCCCA...AAAGACCTCAGACTCTCCTTCCAAGGGACCTGTGGTTCGTGCTGCGAAGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | GGAGGTAAAGACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACAAAGTCACTCCCAGACTaGATATACATGCCTGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: GGKDMERVWWRLWVLRQTKSLPD*IYMPAL Trigger: GAGCGCAGGCATGTATATGCAGTCTGGGAGTGACTT...TGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGTCTTTACCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | AGCATCTTCGCAGCACGAACCACAGGTCCCTTGGAAGGAGAGTCTGAGGTCTTTGAACGATTCTGCCTGTaGTCTGCGAGATTACAGACC | + |
|
Preference number: 4 (lower is better) Translates to: SIFAARTTGPLEGESEVFERFCL*SARLQT Trigger: GGTCTGTAATCTCGCAGAGCACAGGCAGAATCGTTC...AAAGACCTCAGACTCTCCTTCCAAGGGACCTGTGGTTCGTGCTGCGAAGATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGGAACGATTCTGCCTGTGCTCTGCGAGATTACAGACCCTCTCTGGTTAATGGAGAGGGTTTGGTaGAGGCTCTGGGTGCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: KEGTILPVLCEITDPLWLMERVW*RLWVLR Trigger: TCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCAT...TAACCAGAGAGGGTCTGTAATCTCGCAGAGCACAGGCAGAATCGTTCCTTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | TTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTAGCCGAACTTTCTCTCTGCGCTGTACATaGAGCAGACATTCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FGGGSGCYDKHTNTSRTFSLRCT*SRHSPP Trigger: AGGAGGAGAATGTCTGCTGCATGTACAGCGCAGAGA...GAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR GCA 90 bp | AGCATCTTCGCAGCACGAACCACAGGTCCCTTGGAAGGAGAGTCTGAGGTCTTTCTTCCTTCCGCTCTTTaGTGTCAGCCAATTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SIFAARTTGPLEGESEVFLPSAL*CQPISC Trigger: ACAGGAAATTGGCTGACAGCAAAGAGCGGAAGGAAG...AAAGACCTCAGACTCTCCTTCCAAGGGACCTGTGGTTCGTGCTGCGAAGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | GAGGTAAAGACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACAGGAAGGAACGATTCTaGCTGTGCTCTGCGAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: EVKTWRGFGGGSGCYDKHRKERF*LCSARL Trigger: TAATCTCGCAGAGCACAGGCAGAATCGTTCCTTCCT...GTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGTCTTTACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR CCA 90 bp | GCTACGACAAACACACGAACACTAGCCGAACTTTCCAAAACGTCTATTAGTCTATGGCGCGGTAGTAGCTaGGCACGGGTACCTCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATTNTRTLAELSKTSISLWRGSS*ARVPRA Trigger: AGCACGAGGTACCCGTGCCCAGCTACTACCGCGCCA...TAGACTAATAGACGTTTTGGAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR GCA 90 bp | GAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTAGCCGAAAGTTCGGAGTTACATTaGGAGGGCATGTCATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EGLVEALGATTNTRTLAESSELH*EGMSFS Trigger: TGAAAATGACATGCCCTCGCAATGTAACTCCGAACT...TTCGGCTAGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR GCA 90 bp | CCCCACATCCCGGCACCCCATTTCTCATGCTTTAAGTGGAAGCATCTTCGCAGCGCACCCCATTTCTCATaGTTTAAGTGGAAGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHIPAPHFSCFKWKHLRSAPHFS*FKWKHL Trigger: AAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGC...GCTGCGAAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGCCGGGATGTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR GCA 90 bp | GCTACGACAAACACACGAACACTAGCCGAACTTTCCAAAACGTCTATTAGTCTATTGAGACTGGCCCGCTaGTCGAAAGGGGCTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ATTNTRTLAELSKTSISLLRLAR*SKGASK Trigger: CTTCGAAGCCCCTTTCGAGCAGCGGGCCAGTCTCAA...TAGACTAATAGACGTTTTGGAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR CCA 90 bp | TTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTAGCCGAACTTTCTTCTCATGCTTTAAGTaGAAGCATCTTCGCAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: FGGGSGCYDKHTNTSRTFFSCFK*KHLRST Trigger: CGTGCTGCGAAGATGCTTCCACTTAAAGCATGAGAA...GAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR GCA 90 bp | ACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTTTTTTGCAGTCGCATTaGATTTATACTCAGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWRGFGGGSGCYDKHTNTFLQSH*IYTQGG Trigger: TCCTCCCTGAGTATAAATGCAATGCGACTGCAAAAA...AGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR CCA 90 bp | CCCACATCCCGGCACCCCATTTCTCATGCTTTAAGTGGAAGCATCTTCGCAGCAGATCTTAACTTTGCATaGAGAACAGAATGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTSRHPISHALSGSIFAADLNFA*RTECCV Trigger: CACACAGCATTCTGTTCTCCATGCAAAGTTAAGATC...TGCTGCGAAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGCCGGGATGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| 3UTR CAA 72 bp | TTTTTCCCCTACAAGCGGATGGATTCGATCTTAACTTaGCATGGAGAACAGAATGCTGTGTGTGAGTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FFPYKRMDSILT*HGEQNAVCECV Trigger: CACGCACTCACACACAGCATTCTGTTCTCCATGCAAAGTTAAGATCGAATCCATCCGCTTGTAGGGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS GCA 90 bp | TGGCGGGCAGCCCTTCACCTCCACCTCTTCCGGCTCCAGCCTCGCTaGCCAAGGCCCCCGGCCGAGCCAAAAGCCGCAGGAGCCCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WRAALHLHLFRLQPR*PRPPAEPKAAGAQA Trigger: GGCTTGGGCTCCTGCGGCTTTTGGCTCGGCCGGGGGCCTTGGGCAGCGAGGCTGGAGCCGGAAGAGGTGGAGGTGAAGGGCTGCCCGCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513413.2 |
||
| CDS CCA 90 bp | GCGTCTTGTCCAGCGCGGAGTAGCTCGGGCTGGCGCGGTAGTAGCTaGGCACGGGTACCTCGTGCTCCCCAAGGCAGGACTCCGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASCPARSSSGWRGSS*ARVPRAPQGRTPAR Trigger: CCTTGCCGGAGTCCTGCCTTGGGGAGCACGAGGTACCCGTGCCCAGCTACTACCGCGCCAGCCCGAGCTACTCCGCGCTGGACAAGACGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303460.5 ENST00000515593.1 |
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| CDS CCA 90 bp | TGTTCCAACGCCATCCAAGCCAGGCATCTGGAGGAGGGAGGGACGTaGCGGGCAGCCCTTCACCTCCACCTCTTCCGGCTCCAGCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: CSNAIQARHLEEGGT*RAALHLHLFRLQPR Trigger: GCGAGGCTGGAGCCGGAAGAGGTGGAGGTGAAGGGCTGCCCGCCACGTCCCTCCCTCCTCCAGATGCCTGGCTTGGATGGCGTTGGAACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513413.2 |
||
| CDS-3UTR CAA 90 bp | AGCCACACTCCCACCCCCATCTATGAGGGCACACACCACACCCCACATCCCGGCCGGCCTGCCAACAGGTaGTTCCAGGCGATAGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SHTPTPIYEGTHHTPHPGRPANR*FQAIGG Trigger: GCCGCCTATCGCCTGGAACAACCTGTTGGCAGGCCG...GCCGGGATGTGGGGTGTGGTGTGTGCCCTCATAGATGGGGGTGGGAGTGTGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS CCA 90 bp | AGGACAGCGGCCTGCCAACAGGTTGTTCCAGGCGATAGGCGGCTTTaGGGTCGCCCCAGGAGTCCAGCTGCGAGAGGTAGGACGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: RTAACQQVVPGDRRL*GRPRSPAARGRTDR Trigger: CCTATCCGTCCTACCTCTCGCAGCTGGACTCCTGGGGCGACCCCAAAGCCGCCTATCGCCTGGAACAACCTGTTGGCAGGCCGCTGTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR CAA 90 bp | ACCAGGCACAAAGGGAGGAGGGGCGGGGAGAGGAAGGAGCGGGAAGGGAGGAGGAGGCTCTGCTCCGTCTaGATTTCATTGGGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRHKGRRGGERKEREGRRRLCSV*ISLGLG Trigger: CCCCAGCCCCAATGAAATCAAGACGGAGCAGAGCCT...CCTCCTCCCTTCCCGCTCCTTCCTCTCCCCGCCCCTCCTCCCTTTGTGCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS TCA 90 bp | TGGAGAGCGAGGGCGCGAGCCCGCAGCCCCTCATCACCCCGCAATTaGAGTCACTCCCAGACTGCATATACATGCCTGCGCTCCGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: WRARARARSPSSPRN*SHSQTAYTCLRSGY Trigger: ATAGCCGGAGCGCAGGCATGTATATGCAGTCTGGGAGTGACTTCAATTGCGGGGTGATGAGGGGCTGCGGGCTCGCGCCCTCGCTCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS GCA 90 bp | CATCACCCCGCAATTGAAGTCACTCCCAGACTGCATATACATGCCTaGGCTCCGGCTATAGCGCTCTCCTCCGCCGGGCGCAGCCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HHPAIEVTPRLHIHA*APAIALSSAGRSQG Trigger: CCCTTGGCTGCGCCCGGCGGAGGAGAGCGCTATAGCCGGAGCGCAGGCATGTATATGCAGTCTGGGAGTGACTTCAATTGCGGGGTGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CAA 90 bp | ACCAGGCACAAAGGGAGGAGGGGCGGGGAGAGGAAGGAGCGGGAAGGGAGGAGGGTAAGGTTAATGGTCTaGCTAATCTCCAGGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TRHKGRRGGERKEREGRRVRLMV*LISRRR Trigger: GCGCCGCCTGGAGATTAGCAAGACCATTAACCTTAC...CCTCCTCCCTTCCCGCTCCTTCCTCTCCCCGCCCCTCCTCCCTTTGTGCCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR CAA 90 bp | AGCCACACTCCCACCCCCATCTATGAGGGCACACACCACACCCCACATCCCGGCAGACATGGAGAGGGTTaGGTGGAGGCTCTGGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHTPTPIYEGTHHTPHPGRHGEG*VEALGA Trigger: AGCACCCAGAGCCTCCACCAAACCCTCTCCATGTCT...GCCGGGATGTGGGGTGTGGTGTGTGCCCTCATAGATGGGGGTGGGAGTGTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CAA 90 bp | AGCATCTTCGCAGCACGAACCACAGGTCCCTTGGAAGGAGAGTCTGAGGTCTTTCTGCCCTCGTCCCTCTaGGAGAGCGAGGGCGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SIFAARTTGPLEGESEVFLPSSL*ESEGAS Trigger: GCTCGCGCCCTCGCTCTCCAAGAGGGACGAGGGCAG...AAAGACCTCAGACTCTCCTTCCAAGGGACCTGTGGTTCGTGCTGCGAAGATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CAA 90 bp | ACCAGGCACAAAGGGAGGAGGGGCGGGGAGAGGAAGGAGCGGGAAGGGAGGAGGCAGGTGAAATTAAAATaGGAGGTCAGTTCCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: TRHKGRRGGERKEREGRRQVKLK*EVSSRI Trigger: GATCCGGGAACTGACCTCCAATTTTAATTTCACCTG...CCTCCTCCCTTCCCGCTCCTTCCTCTCCCCGCCCCTCCTCCCTTTGTGCCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS CCA 90 bp | CTCTGCGCTGTACATGCAGCAGACATTCTCCTCCTTGACACTAGGTaGGTAGGAGCAGGAGGACAGCGGCCTGCCAACAGGTTGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCAVHAADILLLDTR*VGAGGQRPANRLFQ Trigger: CTGGAACAACCTGTTGGCAGGCCGCTGTCCTCCTGCTCCTACCCACCTAGTGTCAAGGAGGAGAATGTCTGCTGCATGTACAGCGCAGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303460.5 ENST00000515593.1 |
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| CDS-3UTR CAA 90 bp | CCACACCCCACATCCCGGCACCCCATTTCTCATGCTTTAAGTGGAAGCATCTTCGTCTGGCTGTCGGACTaGGGGGTCTCAGGGAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: PHPTSRHPISHALSGSIFVWLSD*GVSGKL Trigger: GAGTTTCCCTGAGACCCCCAAGTCCGACAGCCAGAC...GAAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGCCGGGATGTGGGGTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CAA 90 bp | AGCATCTTCGCAGCACGAACCACAGGTCCCTTGGAAGGAGAGTCTGAGGTCTTTCTGGAGTCGGCAGCTTaGGCCCTCTCCTTTTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SIFAARTTGPLEGESEVFLESAA*ALSFSL Trigger: GAGCGAAAAGGAGAGGGCCAAAGCTGCCGACTCCAG...AAAGACCTCAGACTCTCCTTCCAAGGGACCTGTGGTTCGTGCTGCGAAGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CAA 90 bp | GAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTAGCCGAACGAACCACAGGTCCCTaGGAAGGAGAGTCTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EGLVEALGATTNTRTLAERTTGP*EGESEV Trigger: GACCTCAGACTCTCCTTCCAAGGGACCTGTGGTTCG...TTCGGCTAGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CAA 90 bp | ACATGGAGAGGGTTTGGTGGAGGCTCTGGGTGCTACGACAAACACACGAACACTTCCGTCTTGATTTCATaGGGGCTGGGGGTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TWRGFGGGSGCYDKHTNTSVLIS*GLGVWL Trigger: CAGCCAGACCCCCAGCCCCAATGAAATCAAGACGGA...AGTGTTCGTGTGTTTGTCGTAGCACCCAGAGCCTCCACCAAACCCTCTCCATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS CCA 90 bp | GTTTTCTGCCTTTATCTCCTCTTTCGCTTCGTTATCCGAGGTGTCTaGGCTGGAGTCGGCAGCTTTGGCCCTCTCCTTTTCGCTCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: VFCLYLLFRFVIRGV*AGVGSFGPLLFALR Trigger: TCGGAGAGCGAAAAGGAGAGGGCCAAAGCTGCCGACTCCAGCCCAGACACCTCGGATAACGAAGCGAAAGAGGAGATAAAGGCAGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CAA 90 bp | GCTACGACAAACACACGAACACTAGCCGAACTTTCCAAAACGTCTATTAGTCTATGTTCGGCGCGCGGGTaGAGACTGGCCCGCTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ATTNTRTLAELSKTSISLCSARG*RLARCS Trigger: CGAGCAGCGGGCCAGTCTCAACCCGCGCGCCGAACA...TAGACTAATAGACGTTTTGGAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CAA 90 bp | TTAAGTGGAAGCATCTTCGCAGCACGAACCACAGGTCCCTTGGAAGGAGAGTCTTGGGTGAGTGAGGGCTaGACACACACACCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSGSIFAARTTGPLEGESWVSEG*THTPAT Trigger: TGTGGCTGGTGTGTGTGTCAAGCCCTCACTCACCCA...AGACTCTCCTTCCAAGGGACCTGTGGTTCGTGCTGCGAAGATGCTTCCACTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS-3UTR CAA 90 bp | TTAAGTGGAAGCATCTTCGCAGCACGAACCACAGGTCCCTTGGAAGGAGAGTCTCTCATCACCCCGCAATaGAAGTCACTCCCAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSGSIFAARTTGPLEGESLITPQ*KSLPDC Trigger: GCAGTCTGGGAGTGACTTCAATTGCGGGGTGATGAG...AGACTCTCCTTCCAAGGGACCTGTGGTTCGTGCTGCGAAGATGCTTCCACTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR CAA 90 bp | CCCACATCCCGGCACCCCATTTCTCATGCTTTAAGTGGAAGCATCTTCGCAGCAAGGTCTTTGCCTTTTTaGCAGTCGCATTGCATTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PTSRHPISHALSGSIFAARSLPF*QSHCIY Trigger: ATAAATGCAATGCGACTGCAAAAAAGGCAAAGACCT...TGCTGCGAAGATGCTTCCACTTAAAGCATGAGAAATGGGGTGCCGGGATGTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR CAA 90 bp | GCTACGACAAACACACGAACACTAGCCGAACTTTCCAAAACGTCTATTAGTCTATCTTCCTTCCGCTCTTaGCTGTCAGCCAATTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ATTNTRTLAELSKTSISLSSFRS*LSANFL Trigger: CAGGAAATTGGCTGACAGCAAAGAGCGGAAGGAAGA...TAGACTAATAGACGTTTTGGAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGGAACGATTCTGCCTGTGCTCTGCGAGATTACAGACCCTCTCTGGTTAGATTCGATCTTAACTTaGCATGGAGAACAGAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: KEGTILPVLCEITDPLWLDSILT*HGEQNA Trigger: AGCATTCTGTTCTCCATGCAAAGTTAAGATCGAATC...TAACCAGAGAGGGTCTGTAATCTCGCAGAGCACAGGCAGAATCGTTCCTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR CAA 90 bp | GCTACGACAAACACACGAACACTAGCCGAACTTTCCAAAACGTCTATTAGTCTAGAGTTCGGAGTTACATaGCGAGGGCATGTCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATTNTRTLAELSKTSISLEFGVT*RGHVIF Trigger: GAAAATGACATGCCCTCGCAATGTAACTCCGAACTC...TAGACTAATAGACGTTTTGGAAAGTTCGGCTAGTGTTCGTGTGTTTGTCGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS-3UTR CAA 90 bp | CCCCTACAAGCGGATGGATTCGATCTTAACTTTGCATGGAGAACAGAATGCTGTGGGGGCATTCTGTCTTaGCTTTGCTATGTTCTATTT | + |
|
Preference number: 5 (lower is better) Translates to: PLQADGFDLNFAWRTECCGGILS*LCYVLF Trigger: AAATAGAACATAGCAAAGCAAAGACAGAATGCCCCC...ACAGCATTCTGTTCTCCATGCAAAGTTAAGATCGAATCCATCCGCTTGTAGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS GCA 72 bp | GCCCTTCACCTCCACCTCTTCCGGCTCCAGCCTCGCTaGCCAAGGCCCCCGGCCGAGCCAAAAGCCGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALHLHLFRLQPR*PRPPAEPKAAG Trigger: TCCTGCGGCTTTTGGCTCGGCCGGGGGCCTTGGGCAGCGAGGCTGGAGCCGGAAGAGGTGGAGGTGAAGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513413.2 |
||
| CDS CCA 72 bp | AGTGGGGCGTCTTGTCCAGCGCGGAGTAGCTCGGGCTaGCGCGGTAGTAGCTGGGCACGGGTACCTCGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGASCPARSSSG*RGSSWARVPRA Trigger: AGCACGAGGTACCCGTGCCCAGCTACTACCGCGCCAGCCCGAGCTACTCCGCGCTGGACAAGACGCCCCACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303460.5 ENST00000515593.1 |
||
| CDS CAA 72 bp | TGGGTAGGAGCAGGAGGACAGCGGCCTGCCAACAGGTaGTTCCAGGCGATAGGCGGCTTTGGGGTCGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WVGAGGQRPANR*FQAIGGFGVAP Trigger: TGGGGCGACCCCAAAGCCGCCTATCGCCTGGAACAACCTGTTGGCAGGCCGCTGTCCTCCTGCTCCTACCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303460.5 ENST00000515593.1 |
||
| CDS CAA 90 bp | GACACTAGGTGGGTAGGAGCAGGAGGACAGCGGCCTGCCAACAGGTaGTTCCAGGCGATAGGCGGCTTTGGGGTCGCCCCAGGAGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DTRWVGAGGQRPANR*FQAIGGFGVAPGVQ Trigger: CTGGACTCCTGGGGCGACCCCAAAGCCGCCTATCGCCTGGAACAACCTGTTGGCAGGCCGCTGTCCTCCTGCTCCTACCCACCTAGTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303460.5 ENST00000515593.1 |
||
| CDS TCA 72 bp | CCAGCTGAGGCGATTCCAGATGTTCGGCGCGCGGGTTaGGACTGGCCCGCTGCTCGAAAGGGGCTTCGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PAEAIPDVRRAG*DWPAARKGLRS Trigger: ACTTCGAAGCCCCTTTCGAGCAGCGGGCCAGTCTCAACCCGCGCGCCGAACATCTGGAATCGCCTCAGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000303460.5 ENST00000515593.1 |
||
| CDS GCA 72 bp | TCCAGATGTTCGGCGCGCGGGTTGAGACTGGCCCGCTaGTCGAAAGGGGCTTCGAAGTCGTTGGCCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SRCSARGLRLAR*SKGASKSLAPE Trigger: TTCTGGGGCCAACGACTTCGAAGCCCCTTTCGAGCAGCGGGCCAGTCTCAACCCGCGCGCCGAACATCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303460.5 ENST00000515593.1 |
||
| CDS CAA 90 bp | TTGGAGAGCGAGGGCGCGAGCCCGCAGCCCCTCATCACCCCGCAATaGAAGTCACTCCCAGACTGCATATACATGCCTGCGCTCCGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: LESEGASPQPLITPQ*KSLPDCIYMPALRL Trigger: TAGCCGGAGCGCAGGCATGTATATGCAGTCTGGGAGTGACTTCAATTGCGGGGTGATGAGGGGCTGCGGGCTCGCGCCCTCGCTCTCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
||
| CDS TCA 72 bp | AGGGCGCGAGCCCGCAGCCCCTCATCACCCCGCAATTaGAGTCACTCCCAGACTGCATATACATGCCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: RARARSPSSPRN*SHSQTAYTCLR Trigger: GCGCAGGCATGTATATGCAGTCTGGGAGTGACTTCAATTGCGGGGTGATGAGGGGCTGCGGGCTCGCGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS CCA 72 bp | CGTTATCCGAGGTGTCTGGGCTGGAGTCGGCAGCTTTaGCCCTCTCCTTTTCGCTCTCCGAGGGGCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: RYPRCLGWSRQL*PSPFRSPRGSL Trigger: AAGGGAGCCCCTCGGAGAGCGAAAAGGAGAGGGCCAAAGCTGCCGACTCCAGCCCAGACACCTCGGATAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS CAA 72 bp | GAGGGCGCGAGCCCGCAGCCCCTCATCACCCCGCAATaGAAGTCACTCCCAGACTGCATATACATGCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: EGASPQPLITPQ*KSLPDCIYMPA Trigger: CGCAGGCATGTATATGCAGTCTGGGAGTGACTTCAATTGCGGGGTGATGAGGGGCTGCGGGCTCGCGCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS CAA 72 bp | TCGTTATCCGAGGTGTCTGGGCTGGAGTCGGCAGCTTaGGCCCTCTCCTTTTCGCTCTCCGAGGGGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: SLSEVSGLESAA*ALSFSLSEGLP Trigger: AGGGAGCCCCTCGGAGAGCGAAAAGGAGAGGGCCAAAGCTGCCGACTCCAGCCCAGACACCTCGGATAACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS CAA 90 bp | TCTTTCGCTTCGTTATCCGAGGTGTCTGGGCTGGAGTCGGCAGCTTaGGCCCTCTCCTTTTCGCTCTCCGAGGGGCTCCCTTTAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SFASLSEVSGLESAA*ALSFSLSEGLPLGP Trigger: GGGCCCTAAAGGGAGCCCCTCGGAGAGCGAAAAGGAGAGGGCCAAAGCTGCCGACTCCAGCCCAGACACCTCGGATAACGAAGCGAAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS GCA 72 bp | GCAATTGAAGTCACTCCCAGACTGCATATACATGCCTaGGCTCCGGCTATAGCGCTCTCCTCCGCCGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: AIEVTPRLHIHA*APAIALSSAGR Trigger: GCGCCCGGCGGAGGAGAGCGCTATAGCCGGAGCGCAGGCATGTATATGCAGTCTGGGAGTGACTTCAATTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS CCA 72 bp | CTTTATCTCCTCTTTCGCTTCGTTATCCGAGGTGTCTaGGCTGGAGTCGGCAGCTTTGGCCCTCTCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LYLLFRFVIRGV*AGVGSFGPLLF Trigger: GAAAAGGAGAGGGCCAAAGCTGCCGACTCCAGCCCAGACACCTCGGATAACGAAGCGAAAGAGGAGATAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS CAA 72 bp | GCAGCCAAGGGCTCCGCGTACGAGTTCGGAGTTACATaGCGAGGGCATGTCATTTTCAGAGAGAGGGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: AAKGSAYEFGVT*RGHVIFRERGF Trigger: AAAACCCCTCTCTCTGAAAATGACATGCCCTCGCAATGTAACTCCGAACTCGTACGCGGAGCCCTTGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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| CDS GCA 72 bp | CAGCCAAGGGCTCCGCGTACGAGTTCGGAGTTACATTaGGAGGGCATGTCATTTTCAGAGAGAGGGGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: QPRAPRTSSELH*EGMSFSERGVF Trigger: AAAAACCCCTCTCTCTGAAAATGACATGCCCTCGCAATGTAACTCCGAACTCGTACGCGGAGCCCTTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303460.5 |
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