Pregenerated sensors for HOXA9 (Homo sapiens)
Ensembl gene IDs: ENSG00000078399Ensembl transcript IDs: ENST00000343483.7, ENST00000396345.1, ENST00000465941.1, ENST00000487384.5, ENST00000489695.1, ENST00000497089.1, ENST00000673744.1, ENST00000673917.1
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CATCAAAGCGGCAGGCCTACGAGCCAGCCTGAACAGGGTTTGCCTTaGAAAAGATGTGGCCTGAGGTTTAGAGCCGCTTTGTGCGGGGAT | + |
Preference number: 1 (lower is better) Translates to: HQSGRPTSQPEQGLP*KRCGLRFRAALCGD Trigger: ATCCCCGCACAAAGCGGCTCTAAACCTCAGGCCACATCTTTTCCAAGGCAAACCCTGTTCAGGCTGGCTCGTAGGCCTGCCGCTTTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR TCA 90 bp | ATCTTCCACAATCACAATGGGTGCATCACCCAGTACACAGAAGTTTaGATCACAAAACATAATTACCACAATAAAACACAGTGTTCAAGT | + |
Preference number: 1 (lower is better) Translates to: IFHNHNGCITQYTEV*ITKHNYHNKTQCSS Trigger: ACTTGAACACTGTGTTTTATTGTGGTAATTATGTTTTGTGATTCAAACTTCTGTGTACTGGGTGATGCACCCATTGTGATTGTGGAAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR-3UTR TCA 90 bp | GGAGAAGGCGGAAGGGGGACGGACAGTTCTTTCTTTTTCTCTCTAGCTTACCCTCGAGTGGAGCGCGCATaGAGCCAGTTGGCTGCTGGG | + |
Preference number: 2 (lower is better) Translates to: GEGGRGTDSSFFFSLAYPRVERA*SQLAAG Trigger: CCCAGCAGCCAACTGGCTTCATGCGCGCTCCACTCG...AGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCCCCCTTCCGCCTTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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3UTR-3UTR TCA 90 bp | ATGGAAACCCCAGATTCATCAAGGATACAAATCTACAGTAGCCCAATGGCGGTTGCCTACGAGCCAGCCTaGACAGGGTTTGCCTTGGAA | + |
Preference number: 2 (lower is better) Translates to: METPDSSRIQIYSSPMAVAYEPA*TGFALE Trigger: TTCCAAGGCAAACCCTGTTCAGGCTGGCTCGTAGGC...AACCGCCATTGGGCTACTGTAGATTTGTATCCTTGATGAATCTGGGGTTTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR-3UTR GCA 90 bp | GGAGAAGGCGGAAGGGGGACGGACAGTTCTTTCTTTTTCTCTCTAGCTTACCCTATGAAGCCAGTTGGCTaGTGGGTTATTGGGATCGAT | + |
Preference number: 2 (lower is better) Translates to: GEGGRGTDSSFFFSLAYPMKPVG*WVIGID Trigger: ATCGATCCCAATAACCCAGCAGCCAACTGGCTTCAT...AGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCCCCCTTCCGCCTTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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3UTR-3UTR GCA 90 bp | ATGGAAACCCCAGATTCATCAAGGATACAAATCTACAGTAGCCCAATGGCGGTTCTTGGCAGAGCAATCTaGCGCACAAACTGCAAATTA | + |
Preference number: 2 (lower is better) Translates to: METPDSSRIQIYSSPMAVLGRAI*RTNCKL Trigger: TAATTTGCAGTTTGTGCGGCAGATTGCTCTGCCAAG...AACCGCCATTGGGCTACTGTAGATTTGTATCCTTGATGAATCTGGGGTTTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR-3UTR CCA 90 bp | CACATATGTATAGCTCCGAATTTCCTCACTGTTCGTCTGGTGCAAAAACAATATAGTGTTCAAGTATCTTaGCAGAGCAATCTGCCGCAC | + |
Preference number: 2 (lower is better) Translates to: HICIAPNFLTVRLVQKQYSVQVS*QSNLPH Trigger: GTGCGGCAGATTGCTCTGCCAAGATACTTGAACACT...ATATTGTTTTTGCACCAGACGAACAGTGAGGAAATTCGGAGCTATACATATGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR-3UTR TCA 90 bp | TCACTGTTCGTCTGGTGCAAAAACAATATTCAAGCTTGTCTGATTATGCATATTGGAAAAGATGTGGCCTaGGGTTTAGAGCCGCTTTGT | + |
Preference number: 2 (lower is better) Translates to: SLFVWCKNNIQACLIMHIGKDVA*GLEPLC Trigger: ACAAAGCGGCTCTAAACCTCAGGCCACATCTTTTCC...AATATGCATAATCAGACAAGCTTGAATATTGTTTTTGCACCAGACGAACAGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR-3UTR CCA 90 bp | TCACTGTTCGTCTGGTGCAAAAACAATATTCAAGCTTGTCTGATTATGCATATTCTTCCACAATCACAATaGGTGCATCACCCAGTACAC | + |
Preference number: 2 (lower is better) Translates to: SLFVWCKNNIQACLIMHILPQSQ*VHHPVH Trigger: GTGTACTGGGTGATGCACCCATTGTGATTGTGGAAG...AATATGCATAATCAGACAAGCTTGAATATTGTTTTTGCACCAGACGAACAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR TCA 72 bp | CCTCCTCCATCAAAGCGGCAGGCCTACGAGCCAGCCTaGACAGGGTTTGCCTTGGAAAAGATGTGGCCTGAG | + |
Preference number: 3 (lower is better) Translates to: PPPSKRQAYEPA*TGFALEKMWPE Trigger: CTCAGGCCACATCTTTTCCAAGGCAAACCCTGTTCAGGCTGGCTCGTAGGCCTGCCGCTTTGATGGAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR CCA 72 bp | GGCAGGCCTACGAGCCAGCCTGAACAGGGTTTGCCTTaGAAAAGATGTGGCCTGAGGTTTAGAGCCGCTTTG | + |
Preference number: 3 (lower is better) Translates to: GRPTSQPEQGLP*KRCGLRFRAAL Trigger: CAAAGCGGCTCTAAACCTCAGGCCACATCTTTTCCAAGGCAAACCCTGTTCAGGCTGGCTCGTAGGCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR-3UTR CAA 90 bp | GGAGAAGGCGGAAGGGGGACGGACAGTTCTTTCTTTTTCTCTCTAGCTTACCCTCTCTCATTCTCAGCATaGTTTTCAGAGAAGGCGCCT | + |
Preference number: 3 (lower is better) Translates to: GEGGRGTDSSFFFSLAYPLSFSA*FSEKAP Trigger: AGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAG...AGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCCCCCTTCCGCCTTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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3UTR-3UTR CAA 90 bp | AAACAACCTGAGTTCAAATTGAATTCTATCTTCCACAATCACAATGGGTGCATCAGGTTTAGAGCCGCTTaGTGCGGGGATGGTGGAGGC | + |
Preference number: 3 (lower is better) Translates to: KQPEFKLNSIFHNHNGCIRFRAA*CGDGGG Trigger: GCCTCCACCATCCCCGCACAAAGCGGCTCTAAACCT...GATGCACCCATTGTGATTGTGGAAGATAGAATTCAATTTGAACTCAGGTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR-3UTR CAA 90 bp | TCACTGTTCGTCTGGTGCAAAAACAATATTCAAGCTTGTCTGATTATGCATATTCAGCCTGAACAGGGTTaGCCTTGGAAAAGATGTGGC | + |
Preference number: 3 (lower is better) Translates to: SLFVWCKNNIQACLIMHIQPEQG*PWKRCG Trigger: GCCACATCTTTTCCAAGGCAAACCCTGTTCAGGCTG...AATATGCATAATCAGACAAGCTTGAATATTGTTTTTGCACCAGACGAACAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR-3UTR CAA 90 bp | AAACAACCTGAGTTCAAATTGAATTCTATCTTCCACAATCACAATGGGTGCATCCAGTGTTCAAGTATCTaGGCAGAGCAATCTGCCGCA | + |
Preference number: 3 (lower is better) Translates to: KQPEFKLNSIFHNHNGCIQCSSI*AEQSAA Trigger: TGCGGCAGATTGCTCTGCCAAGATACTTGAACACTG...GATGCACCCATTGTGATTGTGGAAGATAGAATTCAATTTGAACTCAGGTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR TCA 72 bp | GGTAACTATTGCAAAATATACAGTGTAAGTTCAGTCTaGTGGAAACCCCAGATTCATCAAGGATACAAATCT | + |
Preference number: 3 (lower is better) Translates to: GNYCKIYSVSSV*WKPQIHQGYKS Trigger: AGATTTGTATCCTTGATGAATCTGGGGTTTCCATCAGACTGAACTTACACTGTATATTTTGCAATAGTTACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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3UTR TCA 72 bp | ATATCATCTCAACACAACAATTTGGTCAGTAGGCCTTaGGGTAACTATTGCAAAATATACAGTGTAAGTTCA | + |
Preference number: 3 (lower is better) Translates to: ISSQHNNLVSRP*GNYCKIYSVSS Trigger: TGAACTTACACTGTATATTTTGCAATAGTTACCTCAAGGCCTACTGACCAAATTGTTGTGTTGAGATGATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR GCA 90 bp | GAGTGGAGCGCGCATGAAGCCAGTTGGCTGCTGGGTTATTGGGATCGATGGGGGTTGGCGCCCGCCGCGTaGACTGGGTTCCACGAGGCG | + |
Preference number: 4 (lower is better) Translates to: EWSAHEASWLLGYWDRWGLAPAA*TGFHEA Trigger: CGCCTCGTGGAACCCAGTGCACGCGGCGGGCGCCAA...CCCCCATCGATCCCAATAACCCAGCAGCCAACTGGCTTCATGCGCGCTCCACTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS-3UTR CCA 90 bp | GGGGGCTTGTCTCCGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTCCAGGGCCCCAGTGGTaGCCATCACCGTGCCCAGCG | + |
Preference number: 4 (lower is better) Translates to: GGLSPPLSFSALFSEKAPPGPQW*PSPCPA Trigger: CGCTGGGCACGGTGATGGCCACCACTGGGGCCCTGG...AGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCGGAGACAAGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS-3UTR CCA 90 bp | GCTTACAATACCTCCTCCATCAAAGCGGCAGGCCTACGAGCCAGCCTGAACAGGCAGCGGGTACAGCGTTaGCGCCCGCCGCGTGCACTG | + |
Preference number: 4 (lower is better) Translates to: AYNTSSIKAAGLRASLNRQRVQR*RPPRAL Trigger: CAGTGCACGCGGCGGGCGCCAACGCTGTACCCGCTG...CCTGTTCAGGCTGGCTCGTAGGCCTGCCGCTTTGATGGAGGAGGTATTGTAAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | GGGGGCTTGTCTCCGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTCAGCGGGTACAGCGTTaGCGCCCGCCGCGTGCACTG | + |
Preference number: 4 (lower is better) Translates to: GGLSPPLSFSALFSEKAPQRVQR*RPPRAL Trigger: CAGTGCACGCGGCGGGCGCCAACGCTGTACCCGCTG...AGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCGGAGACAAGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS-3UTR TCA 90 bp | GGGGGCTTGTCTCCGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTGGAAGCTGCACGGGCTaGAGTCGGGGTGCTCGGCCA | + |
Preference number: 4 (lower is better) Translates to: GGLSPPLSFSALFSEKAPGSCTG*SRGARP Trigger: TGGCCGAGCACCCCGACTTCAGCCCGTGCAGCTTCC...AGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCGGAGACAAGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS-3UTR CCA 90 bp | GGGGGCTTGTCTCCGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTGCCCGCCGCGTGCACTaGGTTCCACGAGGCGCCAAA | + |
Preference number: 4 (lower is better) Translates to: GGLSPPLSFSALFSEKAPARRVH*VPRGAK Trigger: TTTGGCGCCTCGTGGAACCCAGTGCACGCGGCGGGC...AGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCGGAGACAAGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS-3UTR TCA 90 bp | GGGGCTTGTCTCCGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGAGTGGAGCGCGCATaGAGCCAGTTGGCTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: GACLRRSHSQHCFQRRRLRVERA*SQLAAG Trigger: CCCAGCAGCCAACTGGCTTCATGCGCGCTCCACTCG...AAGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCGGAGACAAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS-3UTR CCA 90 bp | GGAGAAGGCGGAAGGGGGACGGACAGTTCTTTCTTTTTCTCTCTAGCTTACCCTTGCCCAGGGCCCCAGTaGTGGCCATCACCGTGCCCA | + |
Preference number: 4 (lower is better) Translates to: GEGGRGTDSSFFFSLAYPCPGPQ*WPSPCP Trigger: TGGGCACGGTGATGGCCACCACTGGGGCCCTGGGCA...AGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCCCCCTTCCGCCTTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000343483.7 ENST00000396345.1 |
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CDS-3UTR CCA 90 bp | GTCTCCGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTGGGGGTTATTGGGATCGATaGGGGGCTTGTCTCCGCCGC | + |
Preference number: 4 (lower is better) Translates to: VSAALILSIVFREGAFAGGYWDR*GACLRR Trigger: GCGGCGGAGACAAGCCCCCCATCGATCCCAATAACC...CCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCGGAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS-3UTR CCA 90 bp | GCTTACAATACCTCCTCCATCAAAGCGGCAGGCCTACGAGCCAGCCTGAACAGGGACAGTCACCCCTTCTaGCCGACAGCGGTTCAGGTT | + |
Preference number: 4 (lower is better) Translates to: AYNTSSIKAAGLRASLNRDSHPF*PTAVQV Trigger: AACCTGAACCGCTGTCGGCCAGAAGGGGTGACTGTC...CCTGTTCAGGCTGGCTCGTAGGCCTGCCGCTTTGATGGAGGAGGTATTGTAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR GCA 90 bp | GGAGAAGGCGGAAGGGGGACGGACAGTTCTTTCTTTTTCTCTCTAGCTTACCCTAGTCCACGTAGTAGTTaGCCAGGGCCCCAGTGGTGG | + |
Preference number: 4 (lower is better) Translates to: GEGGRGTDSSFFFSLAYPSPRSS*PGPQWW Trigger: CCACCACTGGGGCCCTGGGCAACTACTACGTGGACT...AGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCCCCCTTCCGCCTTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000343483.7 ENST00000396345.1 |
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CDS-3UTR GCA 90 bp | ATGGAAACCCCAGATTCATCAAGGATACAAATCTACAGTAGCCCAATGGCGGTTTTGGCGCCCGCCGCGTaGACTGGGTTCCACGAGGCG | + |
Preference number: 4 (lower is better) Translates to: METPDSSRIQIYSSPMAVLAPAA*TGFHEA Trigger: CGCCTCGTGGAACCCAGTGCACGCGGCGGGCGCCAA...AACCGCCATTGGGCTACTGTAGATTTGTATCCTTGATGAATCTGGGGTTTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | ATGGAAACCCCAGATTCATCAAGGATACAAATCTACAGTAGCCCAATGGCGGTTAGAGCGCACCGGGCGTaGGCTCCAGCCAGGAGCGCA | + |
Preference number: 4 (lower is better) Translates to: METPDSSRIQIYSSPMAVRAHRA*APARSA Trigger: TGCGCTCCTGGCTGGAGCCCACGCCCGGTGCGCTCT...AACCGCCATTGGGCTACTGTAGATTTGTATCCTTGATGAATCTGGGGTTTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR TCA 90 bp | GGAGAAGGCGGAAGGGGGACGGACAGTTCTTTCTTTTTCTCTCTAGCTTACCCTGCCTACGAGCCAGCCTaGACAGGGTTTGCCTTGGAA | + |
Preference number: 4 (lower is better) Translates to: GEGGRGTDSSFFFSLAYPAYEPA*TGFALE Trigger: TTCCAAGGCAAACCCTGTTCAGGCTGGCTCGTAGGC...AGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCCCCCTTCCGCCTTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | GGGGCTTGTCTCCGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTGCGCATGAAGCCAGTTaGCTGCTGGGTTATTGGGAT | + |
Preference number: 4 (lower is better) Translates to: GACLRRSHSQHCFQRRRLAHEAS*LLGYWD Trigger: ATCCCAATAACCCAGCAGCCAACTGGCTTCATGCGC...AAGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCGGAGACAAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS-3UTR CCA 90 bp | ATAGCTCCGAATTTCCTCACTGTTCGTCTGGTGCAAAAACAATATTCAAGCTTGCCAGGGCCCCAGTGGTaGCCATCACCGTGCCCAGCG | + |
Preference number: 4 (lower is better) Translates to: IAPNFLTVRLVQKQYSSLPGPQW*PSPCPA Trigger: CGCTGGGCACGGTGATGGCCACCACTGGGGCCCTGG...CAAGCTTGAATATTGTTTTTGCACCAGACGAACAGTGAGGAAATTCGGAGCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | GCTTACAATACCTCCTCCATCAAAGCGGCAGGCCTACGAGCCAGCCTGAACAGGAGTGTTCAAGTATCTTaGCAGAGCAATCTGCCGCAC | + |
Preference number: 4 (lower is better) Translates to: AYNTSSIKAAGLRASLNRSVQVS*QSNLPH Trigger: GTGCGGCAGATTGCTCTGCCAAGATACTTGAACACT...CCTGTTCAGGCTGGCTCGTAGGCCTGCCGCTTTGATGGAGGAGGTATTGTAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR GCA 90 bp | GCTTACAATACCTCCTCCATCAAAGCGGCAGGCCTACGAGCCAGCCTGAACAGGCTTGGCAGAGCAATCTaGCGCACAAACTGCAAATTA | + |
Preference number: 4 (lower is better) Translates to: AYNTSSIKAAGLRASLNRLGRAI*RTNCKL Trigger: TAATTTGCAGTTTGTGCGGCAGATTGCTCTGCCAAG...CCTGTTCAGGCTGGCTCGTAGGCCTGCCGCTTTGATGGAGGAGGTATTGTAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | GGAGAAGGCGGAAGGGGGACGGACAGTTCTTTCTTTTTCTCTCTAGCTTACCCTAAGCCAGTTGGCTGCTaGGTTATTGGGATCGATGGG | + |
Preference number: 4 (lower is better) Translates to: GEGGRGTDSSFFFSLAYPKPVGC*VIGIDG Trigger: CCCATCGATCCCAATAACCCAGCAGCCAACTGGCTT...AGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCCCCCTTCCGCCTTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000343483.7 ENST00000396345.1 |
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CDS-3UTR CCA 90 bp | GAGTGGAGCGCGCATGAAGCCAGTTGGCTGCTGGGTTATTGGGATCGATGGGGGCTAAATAAGCCCAAATaGCATCACTCGTCTTTTGCT | + |
Preference number: 4 (lower is better) Translates to: EWSAHEASWLLGYWDRWGLNKPK*HHSSFA Trigger: AGCAAAAGACGAGTGATGCCATTTGGGCTTATTTAG...CCCCCATCGATCCCAATAACCCAGCAGCCAACTGGCTTCATGCGCGCTCCACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS-3UTR TCA 90 bp | ATACAGTGTAAGTTCAGTCTGATGGAAACCCCAGATTCATCAAGGATACAAATCGGAAGCTGCACGGGCTaGAGTCGGGGTGCTCGGCCA | + |
Preference number: 4 (lower is better) Translates to: IQCKFSLMETPDSSRIQIGSCTG*SRGARP Trigger: TGGCCGAGCACCCCGACTTCAGCCCGTGCAGCTTCC...GATTTGTATCCTTGATGAATCTGGGGTTTCCATCAGACTGAACTTACACTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | ATACAGTGTAAGTTCAGTCTGATGGAAACCCCAGATTCATCAAGGATACAAATCTGCCCAGGGCCCCAGTaGTGGCCATCACCGTGCCCA | + |
Preference number: 4 (lower is better) Translates to: IQCKFSLMETPDSSRIQICPGPQ*WPSPCP Trigger: TGGGCACGGTGATGGCCACCACTGGGGCCCTGGGCA...GATTTGTATCCTTGATGAATCTGGGGTTTCCATCAGACTGAACTTACACTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | ATGGAAACCCCAGATTCATCAAGGATACAAATCTACAGTAGCCCAATGGCGGTTACCGTCGCCTTGGACTaGAAGCTGCACGGGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: METPDSSRIQIYSSPMAVTVALD*KLHGLK Trigger: CTTCAGCCCGTGCAGCTTCCAGTCCAAGGCGACGGT...AACCGCCATTGGGCTACTGTAGATTTGTATCCTTGATGAATCTGGGGTTTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | CACATATGTATAGCTCCGAATTTCCTCACTGTTCGTCTGGTGCAAAAACAATATGCCCGCCGCGTGCACTaGGTTCCACGAGGCGCCAAA | + |
Preference number: 4 (lower is better) Translates to: HICIAPNFLTVRLVQKQYARRVH*VPRGAK Trigger: TTTGGCGCCTCGTGGAACCCAGTGCACGCGGCGGGC...ATATTGTTTTTGCACCAGACGAACAGTGAGGAAATTCGGAGCTATACATATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | CACATATGTATAGCTCCGAATTTCCTCACTGTTCGTCTGGTGCAAAAACAATATTGCCATAAGGCCGGCTaGAGGGCAAGCCCGCGAAGG | + |
Preference number: 4 (lower is better) Translates to: HICIAPNFLTVRLVQKQYCHKAG*RASPRR Trigger: CCTTCGCGGGCTTGCCCTCCAGCCGGCCTTATGGCA...ATATTGTTTTTGCACCAGACGAACAGTGAGGAAATTCGGAGCTATACATATGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | GCTTACAATACCTCCTCCATCAAAGCGGCAGGCCTACGAGCCAGCCTGAACAGGCTAAATAAGCCCAAATaGCATCACTCGTCTTTTGCT | + |
Preference number: 4 (lower is better) Translates to: AYNTSSIKAAGLRASLNRLNKPK*HHSSFA Trigger: AGCAAAAGACGAGTGATGCCATTTGGGCTTATTTAG...CCTGTTCAGGCTGGCTCGTAGGCCTGCCGCTTTGATGGAGGAGGTATTGTAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | GGAGAAGGCGGAAGGGGGACGGACAGTTCTTTCTTTTTCTCTCTAGCTTACCCTCTTCCACAATCACAATaGGTGCATCACCCAGTACAC | + |
Preference number: 4 (lower is better) Translates to: GEGGRGTDSSFFFSLAYPLPQSQ*VHHPVH Trigger: GTGTACTGGGTGATGCACCCATTGTGATTGTGGAAG...AGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCCCCCTTCCGCCTTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR TCA 90 bp | ATGGAAACCCCAGATTCATCAAGGATACAAATCTACAGTAGCCCAATGGCGGTTGTCAGGGACAAAGTGTaGGTGTCAAGCGTGGGACAG | + |
Preference number: 4 (lower is better) Translates to: METPDSSRIQIYSSPMAVVRDKV*VSSVGQ Trigger: CTGTCCCACGCTTGACACTCACACTTTGTCCCTGAC...AACCGCCATTGGGCTACTGTAGATTTGTATCCTTGATGAATCTGGGGTTTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | GGAGAAGGCGGAAGGGGGACGGACAGTTCTTTCTTTTTCTCTCTAGCTTACCCTAGAAGGCGCCTTCGCTaGGTTGTTTTTCTCTATCAA | + |
Preference number: 4 (lower is better) Translates to: GEGGRGTDSSFFFSLAYPRRRLR*VVFLYQ Trigger: TTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCT...AGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCCCCCTTCCGCCTTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000343483.7 ENST00000396345.1 |
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CDS-3UTR CCA 90 bp | AAACAACCTGAGTTCAAATTGAATTCTATCTTCCACAATCACAATGGGTGCATCGGTTATTGGGATCGATaGGGGGCTTGTCTCCGCCGC | + |
Preference number: 4 (lower is better) Translates to: KQPEFKLNSIFHNHNGCIGYWDR*GACLRR Trigger: GCGGCGGAGACAAGCCCCCCATCGATCCCAATAACC...GATGCACCCATTGTGATTGTGGAAGATAGAATTCAATTTGAACTCAGGTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | ATACAGTGTAAGTTCAGTCTGATGGAAACCCCAGATTCATCAAGGATACAAATCTGTGAGTGTCAAGCGTaGGACAGTCACCCCTTCTGG | + |
Preference number: 4 (lower is better) Translates to: IQCKFSLMETPDSSRIQICECQA*DSHPFW Trigger: CCAGAAGGGGTGACTGTCCCACGCTTGACACTCACA...GATTTGTATCCTTGATGAATCTGGGGTTTCCATCAGACTGAACTTACACTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | ATACAGTGTAAGTTCAGTCTGATGGAAACCCCAGATTCATCAAGGATACAAATCAAGCCAGTTGGCTGCTaGGTTATTGGGATCGATGGG | + |
Preference number: 4 (lower is better) Translates to: IQCKFSLMETPDSSRIQIKPVGC*VIGIDG Trigger: CCCATCGATCCCAATAACCCAGCAGCCAACTGGCTT...GATTTGTATCCTTGATGAATCTGGGGTTTCCATCAGACTGAACTTACACTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | CACATATGTATAGCTCCGAATTTCCTCACTGTTCGTCTGGTGCAAAAACAATATGCGCATGAAGCCAGTTaGCTGCTGGGTTATTGGGAT | + |
Preference number: 4 (lower is better) Translates to: HICIAPNFLTVRLVQKQYAHEAS*LLGYWD Trigger: ATCCCAATAACCCAGCAGCCAACTGGCTTCATGCGC...ATATTGTTTTTGCACCAGACGAACAGTGAGGAAATTCGGAGCTATACATATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR GCA 90 bp | CACATATGTATAGCTCCGAATTTCCTCACTGTTCGTCTGGTGCAAAAACAATATAGCCTGAACAGGGTTTaGCTTGGAAAAGATGTGGCC | + |
Preference number: 4 (lower is better) Translates to: HICIAPNFLTVRLVQKQYSLNRV*LGKDVA Trigger: GGCCACATCTTTTCCAAGGCAAACCCTGTTCAGGCT...ATATTGTTTTTGCACCAGACGAACAGTGAGGAAATTCGGAGCTATACATATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR GCA 90 bp | ATACAGTGTAAGTTCAGTCTGATGGAAACCCCAGATTCATCAAGGATACAAATCCACAATCACAATGGGTaGATCACCCAGTACACAGAA | + |
Preference number: 4 (lower is better) Translates to: IQCKFSLMETPDSSRIQIHNHNG*ITQYTE Trigger: TTCTGTGTACTGGGTGATGCACCCATTGTGATTGTG...GATTTGTATCCTTGATGAATCTGGGGTTTCCATCAGACTGAACTTACACTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | ATACAGTGTAAGTTCAGTCTGATGGAAACCCCAGATTCATCAAGGATACAAATCCTCAACACAACAATTTaGTCAGTAGGCCTTGAGGTA | + |
Preference number: 4 (lower is better) Translates to: IQCKFSLMETPDSSRIQILNTTI*SVGLEV Trigger: TACCTCAAGGCCTACTGACCAAATTGTTGTGTTGAG...GATTTGTATCCTTGATGAATCTGGGGTTTCCATCAGACTGAACTTACACTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | TCACTGTTCGTCTGGTGCAAAAACAATATTCAAGCTTGTCTGATTATGCATATTAGAAGGCGCCTTCGCTaGGTTGTTTTTCTCTATCAA | + |
Preference number: 4 (lower is better) Translates to: SLFVWCKNNIQACLIMHIRRRLR*VVFLYQ Trigger: TTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCT...AATATGCATAATCAGACAAGCTTGAATATTGTTTTTGCACCAGACGAACAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR TCA 90 bp | TCACTGTTCGTCTGGTGCAAAAACAATATTCAAGCTTGTCTGATTATGCATATTAGTGTAAGTTCAGTCTaGTGGAAACCCCAGATTCAT | + |
Preference number: 4 (lower is better) Translates to: SLFVWCKNNIQACLIMHISVSSV*WKPQIH Trigger: ATGAATCTGGGGTTTCCATCAGACTGAACTTACACT...AATATGCATAATCAGACAAGCTTGAATATTGTTTTTGCACCAGACGAACAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR TCA 90 bp | AAACAACCTGAGTTCAAATTGAATTCTATCTTCCACAATCACAATGGGTGCATCTTGGTCAGTAGGCCTTaGGGTAACTATTGCAAAATA | + |
Preference number: 4 (lower is better) Translates to: KQPEFKLNSIFHNHNGCILVSRP*GNYCKI Trigger: TATTTTGCAATAGTTACCTCAAGGCCTACTGACCAA...GATGCACCCATTGTGATTGTGGAAGATAGAATTCAATTTGAACTCAGGTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR GCA 90 bp | AAACAACCTGAGTTCAAATTGAATTCTATCTTCCACAATCACAATGGGTGCATCGCATCACTCGTCTTTTaGTCGGTCTTTGTTGATTTT | + |
Preference number: 4 (lower is better) Translates to: KQPEFKLNSIFHNHNGCIASLVF*SVFVDF Trigger: AAAATCAACAAAGACCGAGCAAAAGACGAGTGATGC...GATGCACCCATTGTGATTGTGGAAGATAGAATTCAATTTGAACTCAGGTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | CACATATGTATAGCTCCGAATTTCCTCACTGTTCGTCTGGTGCAAAAACAATATTCCTCACTGTTCGTCTaGTGCAAAAACAATATTCAA | + |
Preference number: 4 (lower is better) Translates to: HICIAPNFLTVRLVQKQYSSLFV*CKNNIQ Trigger: TTGAATATTGTTTTTGCACCAGACGAACAGTGAGGA...ATATTGTTTTTGCACCAGACGAACAGTGAGGAAATTCGGAGCTATACATATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CCA 90 bp | TCACTGTTCGTCTGGTGCAAAAACAATATTCAAGCTTGTCTGATTATGCATATTTTTTTCTCTATCAACTaGAGGAGAACCACAAGCATA | + |
Preference number: 4 (lower is better) Translates to: SLFVWCKNNIQACLIMHIFFSIN*RRTTSI Trigger: TATGCTTGTGGTTCTCCTCCAGTTGATAGAGAAAAA...AATATGCATAATCAGACAAGCTTGAATATTGTTTTTGCACCAGACGAACAGTGA 36% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS GCA 90 bp | AACTACCTAAATCACCGACCAGTTCTGGTGCTGCCCGCGAAGGGCTaGCTCGCCCGCCGCCGCCGCCGCCTCCGCCGCTGCCGCCGCCGC | + |
Preference number: 5 (lower is better) Translates to: NYLNHRPVLVLPAKG*LARRRRRLRRCRRR Trigger: GCGGCGGCGGCAGCGGCGGAGGCGGCGGCGGCGGCGGGCGAGGCAGCCCTTCGCGGGCAGCACCAGAACTGGTCGGTGATTTAGGTAGTT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489695.1 |
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CDS CCA 90 bp | CGCCCAGCAGGAACGAGTCCACGTAGTAGTTGCCCAGGGCCCCAGTaGTGGCCATCACCGTGCCCAGCGCCTGGCCCGCCCGGCCCGACC | + |
Preference number: 5 (lower is better) Translates to: RPAGTSPRSSCPGPQ*WPSPCPAPGPPGPT Trigger: GGTCGGGCCGGGCGGGCCAGGCGCTGGGCACGGTGATGGCCACCACTGGGGCCCTGGGCAACTACTACGTGGACTCGTTCCTGCTGGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343483.7 ENST00000396345.1 |
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CDS GCA 90 bp | CATCCGCGGCGTCGGCGCCCAGCAGGAACGAGTCCACGTAGTAGTTaGCCAGGGCCCCAGTGGTGGCCATCACCGTGCCCAGCGCCTGGC | + |
Preference number: 5 (lower is better) Translates to: HPRRRRPAGTSPRSS*PGPQWWPSPCPAPG Trigger: GCCAGGCGCTGGGCACGGTGATGGCCACCACTGGGGCCCTGGGCAACTACTACGTGGACTCGTTCCTGCTGGGCGCCGACGCCGCGGATG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343483.7 ENST00000396345.1 |
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CDS GCA 90 bp | TGGTGGTGGTACACCGCAGCGGGTACAGCGTTGGCGCCCGCCGCGTaGACTGGGTTCCACGAGGCGCCAAACACCGTCGCCTTGGACTGG | + |
Preference number: 5 (lower is better) Translates to: WWWYTAAGTALAPAA*TGFHEAPNTVALDW Trigger: CCAGTCCAAGGCGACGGTGTTTGGCGCCTCGTGGAACCCAGTGCACGCGGCGGGCGCCAACGCTGTACCCGCTGCGGTGTACCACCACCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343483.7 ENST00000396345.1 ENST00000673744.1 ENST00000673917.1 |
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CDS CCA 90 bp | AGGGGTGGTGGTGATGGTGGTGGTACACCGCAGCGGGTACAGCGTTaGCGCCCGCCGCGTGCACTGGGTTCCACGAGGCGCCAAACACCG | + |
Preference number: 5 (lower is better) Translates to: RGGGDGGGTPQRVQR*RPPRALGSTRRQTP Trigger: CGGTGTTTGGCGCCTCGTGGAACCCAGTGCACGCGGCGGGCGCCAACGCTGTACCCGCTGCGGTGTACCACCACCATCACCACCACCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343483.7 ENST00000396345.1 ENST00000673744.1 ENST00000673917.1 |
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CDS CCA 90 bp | GTGGTACACCGCAGCGGGTACAGCGTTGGCGCCCGCCGCGTGCACTaGGTTCCACGAGGCGCCAAACACCGTCGCCTTGGACTGGAAGCT | + |
Preference number: 5 (lower is better) Translates to: VVHRSGYSVGARRVH*VPRGAKHRRLGLEA Trigger: AGCTTCCAGTCCAAGGCGACGGTGTTTGGCGCCTCGTGGAACCCAGTGCACGCGGCGGGCGCCAACGCTGTACCCGCTGCGGTGTACCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343483.7 ENST00000396345.1 ENST00000673744.1 ENST00000673917.1 |
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CDS GCA 90 bp | GGAGGTGTGTGGTGGAAGGGGAAAGCCGGCCGGCTGGCAAAGCGCTaGGGAGAAAGACACGAGGCTCCTGAGCAGGGAAAGCCGAGGTTG | + |
Preference number: 5 (lower is better) Translates to: GGVWWKGKAGRLAKR*GERHEAPEQGKPRL Trigger: CAACCTCGGCTTTCCCTGCTCAGGAGCCTCGTGTCTTTCTCCGCAGCGCTTTGCCAGCCGGCCGGCTTTCCCCTTCCACCACACACCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497089.1 |
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CDS-3UTR CAA 90 bp | GCTTACAATACCTCCTCCATCAAAGCGGCAGGCCTACGAGCCAGCCTGAACAGGGCAGCGGGTACAGCGTaGGCGCCCGCCGCGTGCACT | + |
Preference number: 5 (lower is better) Translates to: AYNTSSIKAAGLRASLNRAAGTA*APAACT Trigger: AGTGCACGCGGCGGGCGCCAACGCTGTACCCGCTGC...CCTGTTCAGGCTGGCTCGTAGGCCTGCCGCTTTGATGGAGGAGGTATTGTAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CAA 90 bp | GTCTCCGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTGGGGCAGCGGGTACAGCGTaGGCGCCCGCCGCGTGCACT | + |
Preference number: 5 (lower is better) Translates to: VSAALILSIVFREGAFAGAAGTA*APAACT Trigger: AGTGCACGCGGCGGGCGCCAACGCTGTACCCGCTGC...CCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCGGAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS CCA 90 bp | TACAACTCCTGTCAGTGGACTTTGGTGGGCTGGCGGGACTGGGGGTaGGAAGCGGCTGCCAGCCTTGATGGAAAGACGGCCCCACTCCCA | + |
Preference number: 5 (lower is better) Translates to: YNSCQWTLVGWRDWG*EAAASLDGKTAPLP Trigger: TGGGAGTGGGGCCGTCTTTCCATCAAGGCTGGCAGCCGCTTCCCACCCCCAGTCCCGCCAGCCCACCAAAGTCCACTGACAGGAGTTGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS CCA 90 bp | TGTGACCAGGTGGAGGTGTGTGGTGGAAGGGGAAAGCCGGCCGGCTaGCAAAGCGCTGCGGAGAAAGACACGAGGCTCCTGAGCAGGGAA | + |
Preference number: 5 (lower is better) Translates to: CDQVEVCGGRGKPAG*QSAAEKDTRLLSRE Trigger: TTCCCTGCTCAGGAGCCTCGTGTCTTTCTCCGCAGCGCTTTGCCAGCCGGCCGGCTTTCCCCTTCCACCACACACCTCCACCTGGTCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497089.1 |
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CDS CCA 90 bp | CTTCTCTACAACTCCTGTCAGTGGACTTTGGTGGGCTGGCGGGACTaGGGGTGGGAAGCGGCTGCCAGCCTTGATGGAAAGACGGCCCCA | + |
Preference number: 5 (lower is better) Translates to: LLYNSCQWTLVGWRD*GWEAAASLDGKTAP Trigger: TGGGGCCGTCTTTCCATCAAGGCTGGCAGCCGCTTCCCACCCCCAGTCCCGCCAGCCCACCAAAGTCCACTGACAGGAGTTGTAGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS CCA 90 bp | CCGGCTTGCCTTCTCTACAACTCCTGTCAGTGGACTTTGGTGGGCTaGCGGGACTGGGGGTGGGAAGCGGCTGCCAGCCTTGATGGAAAG | + |
Preference number: 5 (lower is better) Translates to: PACLLYNSCQWTLVG*RDWGWEAAASLDGK Trigger: CTTTCCATCAAGGCTGGCAGCCGCTTCCCACCCCCAGTCCCGCCAGCCCACCAAAGTCCACTGACAGGAGTTGTAGAGAAGGCAAGCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS CCA 90 bp | CGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTaGGTTGTTTTTCTCTATCAACTGCCGTCCGGCGCCGCCGCCGCC | + |
Preference number: 5 (lower is better) Translates to: RRSHSQHCFQRRRLR*VVFLYQLPSGAAAA Trigger: GGCGGCGGCGGCGCCGGACGGCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS CCA 90 bp | CGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTaGGTTGTTTTTCTCTATCAACGTCCGGCGCCGCCGCCGCCACGG | + |
Preference number: 5 (lower is better) Translates to: RRSHSQHCFQRRRLR*VVFLYQRPAPPPPR Trigger: CCGTGGCGGCGGCGGCGCCGGACGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673917.1 |
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CDS-3UTR CAA 90 bp | GTCTCCGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTGGGTGCCTCTCGGTGAGGTaGAGCAGTCGAGCCACCTCG | + |
Preference number: 5 (lower is better) Translates to: VSAALILSIVFREGAFAGCLSVR*SSRATS Trigger: CGAGGTGGCTCGACTGCTCAACCTCACCGAGAGGCA...CCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCGGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS GCA 90 bp | TTCCCATTCAGCTCTGGATCTGGAACTGGCCCCTTGTCTGAATTCTaGCTCCTCAAAAGTGGCGAACCTGGCCCTATGGCCGTCAGGATC | + |
Preference number: 5 (lower is better) Translates to: FPFSSGSGTGPLSEF*LLKSGEPGPMAVRI Trigger: GATCCTGACGGCCATAGGGCCAGGTTCGCCACTTTTGAGGAGGCAGAATTCAGACAAGGGGCCAGTTCCAGATCCAGAGCTGAATGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS-3UTR CAA 90 bp | GCTTACAATACCTCCTCCATCAAAGCGGCAGGCCTACGAGCCAGCCTGAACAGGGGCGCCTTCGCTGGGTaGTTTTTCTCTATCAACTGG | + |
Preference number: 5 (lower is better) Translates to: AYNTSSIKAAGLRASLNRGAFAG*FFSINW Trigger: CCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCC...CCTGTTCAGGCTGGCTCGTAGGCCTGCCGCTTTGATGGAGGAGGTATTGTAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CAA 90 bp | GCTTACAATACCTCCTCCATCAAAGCGGCAGGCCTACGAGCCAGCCTGAACAGGCAGTGTTCAAGTATCTaGGCAGAGCAATCTGCCGCA | + |
Preference number: 5 (lower is better) Translates to: AYNTSSIKAAGLRASLNRQCSSI*AEQSAA Trigger: TGCGGCAGATTGCTCTGCCAAGATACTTGAACACTG...CCTGTTCAGGCTGGCTCGTAGGCCTGCCGCTTTGATGGAGGAGGTATTGTAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CAA 90 bp | GCTTACAATACCTCCTCCATCAAAGCGGCAGGCCTACGAGCCAGCCTGAACAGGCTCTCATTCTCAGCATaGTTTTCAGAGAAGGCGCCT | + |
Preference number: 5 (lower is better) Translates to: AYNTSSIKAAGLRASLNRLSFSA*FSEKAP Trigger: AGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAG...CCTGTTCAGGCTGGCTCGTAGGCCTGCCGCTTTGATGGAGGAGGTATTGTAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CAA 90 bp | GGGGGCTTGTCTCCGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTCTCTCATTCTCAGCATaGTTTTCAGAGAAGGCGCCT | + |
Preference number: 5 (lower is better) Translates to: GGLSPPLSFSALFSEKAPLSFSA*FSEKAP Trigger: AGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAG...AGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCGGAGACAAGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS-3UTR CAA 90 bp | GGAGAAGGCGGAAGGGGGACGGACAGTTCTTTCTTTTTCTCTCTAGCTTACCCTCAGCCTGAACAGGGTTaGCCTTGGAAAAGATGTGGC | + |
Preference number: 5 (lower is better) Translates to: GEGGRGTDSSFFFSLAYPQPEQG*PWKRCG Trigger: GCCACATCTTTTCCAAGGCAAACCCTGTTCAGGCTG...AGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCCCCCTTCCGCCTTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CAA 90 bp | GGAGAAGGCGGAAGGGGGACGGACAGTTCTTTCTTTTTCTCTCTAGCTTACCCTGGCGCCTTCGCTGGGTaGTTTTTCTCTATCAACTGC | + |
Preference number: 5 (lower is better) Translates to: GEGGRGTDSSFFFSLAYPGAFAG*FFSINC Trigger: GCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCC...AGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCCCCCTTCCGCCTTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS-3UTR CAA 90 bp | ATAGCTCCGAATTTCCTCACTGTTCGTCTGGTGCAAAAACAATATTCAAGCTTGTGCCTCTCGGTGAGGTaGAGCAGTCGAGCCACCTCG | + |
Preference number: 5 (lower is better) Translates to: IAPNFLTVRLVQKQYSSLCLSVR*SSRATS Trigger: CGAGGTGGCTCGACTGCTCAACCTCACCGAGAGGCA...CAAGCTTGAATATTGTTTTTGCACCAGACGAACAGTGAGGAAATTCGGAGCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS CCA 90 bp | CGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTaGGTTGTTTTTCTCTATCAACTGGAGGAGAACCACAAGCATAGT | + |
Preference number: 5 (lower is better) Translates to: RRSHSQHCFQRRRLR*VVFLYQLEENHKHS Trigger: ACTATGCTTGTGGTTCTCCTCCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS-3UTR CAA 90 bp | ATAGCTCCGAATTTCCTCACTGTTCGTCTGGTGCAAAAACAATATTCAAGCTTGAGGTTTAGAGCCGCTTaGTGCGGGGATGGTGGAGGC | + |
Preference number: 5 (lower is better) Translates to: IAPNFLTVRLVQKQYSSLRFRAA*CGDGGG Trigger: GCCTCCACCATCCCCGCACAAAGCGGCTCTAAACCT...CAAGCTTGAATATTGTTTTTGCACCAGACGAACAGTGAGGAAATTCGGAGCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS CCA 90 bp | GTTTTCAGAGAAGGCGCCTTCGCTGGGTTGTTTTTCTCTATCAACTaGAGGAGAACCACAAGCATAGTCAGTCAGGGACAAAGTGTGAGT | + |
Preference number: 5 (lower is better) Translates to: VFREGAFAGLFFSIN*RRTTSIVSQGQSVS Trigger: ACTCACACTTTGTCCCTGACTGACTATGCTTGTGGTTCTCCTCCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS CCA 90 bp | CGCCGCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTaGGTTGTTTTTCTCTATCAACTGGAGACGATTTCAACTGAAGTA | + |
Preference number: 5 (lower is better) Translates to: RRSHSQHCFQRRRLR*VVFLYQLETISTEV Trigger: TACTTCAGTTGAAATCGTCTCCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGCGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489695.1 |
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CDS GCA 72 bp | AATCACCGACCAGTTCTGGTGCTGCCCGCGAAGGGCTaGCTCGCCCGCCGCCGCCGCCGCCTCCGCCGCTGC | + |
Preference number: 6 (lower is better) Translates to: NHRPVLVLPAKG*LARRRRRLRRC Trigger: GCAGCGGCGGAGGCGGCGGCGGCGGCGGGCGAGGCAGCCCTTCGCGGGCAGCACCAGAACTGGTCGGTGATT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489695.1 |
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CDS GCA 72 bp | TACACCGCAGCGGGTACAGCGTTGGCGCCCGCCGCGTaGACTGGGTTCCACGAGGCGCCAAACACCGTCGCC | + |
Preference number: 6 (lower is better) Translates to: YTAAGTALAPAA*TGFHEAPNTVA Trigger: GGCGACGGTGTTTGGCGCCTCGTGGAACCCAGTGCACGCGGCGGGCGCCAACGCTGTACCCGCTGCGGTGTA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343483.7 ENST00000396345.1 ENST00000673744.1 ENST00000673917.1 |
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CDS CCA 72 bp | CGCAGCGGGTACAGCGTTGGCGCCCGCCGCGTGCACTaGGTTCCACGAGGCGCCAAACACCGTCGCCTTGGA | + |
Preference number: 6 (lower is better) Translates to: RSGYSVGARRVH*VPRGAKHRRLG Trigger: TCCAAGGCGACGGTGTTTGGCGCCTCGTGGAACCCAGTGCACGCGGCGGGCGCCAACGCTGTACCCGCTGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343483.7 ENST00000396345.1 ENST00000673744.1 ENST00000673917.1 |
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CDS CCA 72 bp | GGTGATGGTGGTGGTACACCGCAGCGGGTACAGCGTTaGCGCCCGCCGCGTGCACTGGGTTCCACGAGGCGC | + |
Preference number: 6 (lower is better) Translates to: GDGGGTPQRVQR*RPPRALGSTRR Trigger: GCGCCTCGTGGAACCCAGTGCACGCGGCGGGCGCCAACGCTGTACCCGCTGCGGTGTACCACCACCATCACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000343483.7 ENST00000396345.1 ENST00000673744.1 ENST00000673917.1 |
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CDS CAA 90 bp | CGCTGCGGAGAAAGACACGAGGCTCCTGAGCAGGGAAAGCCGAGGTaGCCACCGCAGGCCTGGCACGACCAGGGCCGTGATGCCCCGCCC | + |
Preference number: 6 (lower is better) Translates to: RCGERHEAPEQGKPR*PPQAWHDQGRDAPP Trigger: GGGCGGGGCATCACGGCCCTGGTCGTGCCAGGCCTGCGGTGGCAACCTCGGCTTTCCCTGCTCAGGAGCCTCGTGTCTTTCTCCGCAGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497089.1 |
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CDS CAA 90 bp | CTTTGGTGGGCTGGCGGGACTGGGGGTGGGAAGCGGCTGCCAGCCTaGATGGAAAGACGGCCCCACTCCCACTCCCAAGGCCAGAGCCAG | + |
Preference number: 6 (lower is better) Translates to: LWWAGGTGGGKRLPA*MERRPHSHSQGQSQ Trigger: CTGGCTCTGGCCTTGGGAGTGGGAGTGGGGCCGTCTTTCCATCAAGGCTGGCAGCCGCTTCCCACCCCCAGTCCCGCCAGCCCACCAAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS GCA 72 bp | CGTCGGCGCCCAGCAGGAACGAGTCCACGTAGTAGTTaGCCAGGGCCCCAGTGGTGGCCATCACCGTGCCCA | + |
Preference number: 6 (lower is better) Translates to: RRRPAGTSPRSS*PGPQWWPSPCP Trigger: TGGGCACGGTGATGGCCACCACTGGGGCCCTGGGCAACTACTACGTGGACTCGTTCCTGCTGGGCGCCGACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343483.7 ENST00000396345.1 |
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CDS TCA 72 bp | GCTGGCAAAGCGCTGCGGAGAAAGACACGAGGCTCCTaGGCAGGGAAAGCCGAGGTTGCCACCGCAGGCCTG | + |
Preference number: 6 (lower is better) Translates to: AGKALRRKTRGS*AGKAEVATAGL Trigger: CAGGCCTGCGGTGGCAACCTCGGCTTTCCCTGCTCAGGAGCCTCGTGTCTTTCTCCGCAGCGCTTTGCCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497089.1 |
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CDS GCA 72 bp | TGGTGGAAGGGGAAAGCCGGCCGGCTGGCAAAGCGCTaGGGAGAAAGACACGAGGCTCCTGAGCAGGGAAAG | + |
Preference number: 6 (lower is better) Translates to: WWKGKAGRLAKR*GERHEAPEQGK Trigger: CTTTCCCTGCTCAGGAGCCTCGTGTCTTTCTCCGCAGCGCTTTGCCAGCCGGCCGGCTTTCCCCTTCCACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497089.1 |
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CDS CCA 72 bp | AACTCCTGTCAGTGGACTTTGGTGGGCTGGCGGGACTaGGGGTGGGAAGCGGCTGCCAGCCTTGATGGAAAG | + |
Preference number: 6 (lower is better) Translates to: NSCQWTLVGWRD*GWEAAASLDGK Trigger: CTTTCCATCAAGGCTGGCAGCCGCTTCCCACCCCCAGTCCCGCCAGCCCACCAAAGTCCACTGACAGGAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS CCA 72 bp | CTTGCCTTCTCTACAACTCCTGTCAGTGGACTTTGGTaGGCTGGCGGGACTGGGGGTGGGAAGCGGCTGCCA | + |
Preference number: 6 (lower is better) Translates to: LAFSTTPVSGLW*AGGTGGGKRLP Trigger: TGGCAGCCGCTTCCCACCCCCAGTCCCGCCAGCCCACCAAAGTCCACTGACAGGAGTTGTAGAGAAGGCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS CAA 90 bp | GCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTGGGTaGTTTTTCTCTATCAACGTCCGGCGCCGCCGCCGCCACGGGCGC | + |
Preference number: 6 (lower is better) Translates to: ALILSIVFREGAFAG*FFSINVRRRRRHGR Trigger: GCGCCCGTGGCGGCGGCGGCGCCGGACGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673917.1 |
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CDS CAA 90 bp | GCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTGGGTaGTTTTTCTCTATCAACTGCCGTCCGGCGCCGCCGCCGCCACGG | + |
Preference number: 6 (lower is better) Translates to: ALILSIVFREGAFAG*FFSINCRPAPPPPR Trigger: CCGTGGCGGCGGCGGCGCCGGACGGCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS CAA 72 bp | CTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTGGGTaGTTTTTCTCTATCAACGTCCGGCGCCGCCGCCGC | + |
Preference number: 6 (lower is better) Translates to: LSIVFREGAFAG*FFSINVRRRRR Trigger: GCGGCGGCGGCGCCGGACGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673917.1 |
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CDS CAA 90 bp | GGACTCACGCGCTTCCCATTCAGCTCTGGATCTGGAACTGGCCCCTaGTCTGAATTCTGCCTCCTCAAAAGTGGCGAACCTGGCCCTATG | + |
Preference number: 6 (lower is better) Translates to: GLTRFPFSSGSGTGP*SEFCLLKSGEPGPM Trigger: CATAGGGCCAGGTTCGCCACTTTTGAGGAGGCAGAATTCAGACAAGGGGCCAGTTCCAGATCCAGAGCTGAATGGGAAGCGCGTGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS GCA 72 bp | AGCTCTGGATCTGGAACTGGCCCCTTGTCTGAATTCTaGCTCCTCAAAAGTGGCGAACCTGGCCCTATGGCC | + |
Preference number: 6 (lower is better) Translates to: SSGSGTGPLSEF*LLKSGEPGPMA Trigger: GGCCATAGGGCCAGGTTCGCCACTTTTGAGGAGGCAGAATTCAGACAAGGGGCCAGTTCCAGATCCAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS CCA 72 bp | CATAGTCAGTCAGGGACAAAGTGTGAGTGTCAAGCGTaGGACAGTCACCCCTTCTGGCCGACAGCGGTTCAG | + |
Preference number: 6 (lower is better) Translates to: HSQSGTKCECQA*DSHPFWPTAVQ Trigger: CTGAACCGCTGTCGGCCAGAAGGGGTGACTGTCCCACGCTTGACACTCACACTTTGTCCCTGACTGACTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS CCA 72 bp | AATTCTGCCTCCTCAAAAGTGGCGAACCTGGCCCTATaGCCGTCAGGATCCTCAGAGTGTCAGGAGCCCAGA | + |
Preference number: 6 (lower is better) Translates to: NSASSKVANLAL*PSGSSECQEPR Trigger: TCTGGGCTCCTGACACTCTGAGGATCCTGACGGCCATAGGGCCAGGTTCGCCACTTTTGAGGAGGCAGAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS CAA 72 bp | CTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTGGGTaGTTTTTCTCTATCAACTGCCGTCCGGCGCCGCCG | + |
Preference number: 6 (lower is better) Translates to: LSIVFREGAFAG*FFSINCRPAPP Trigger: CGGCGGCGCCGGACGGCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS CAA 90 bp | TTGATCCAGTTAGGATCTTCTCCTCTGGTGTTGTGCTCACCCGGCTaGCCTTCTCTACAACTCCTGTCAGTGGACTTTGGTGGGCTGGCG | + |
Preference number: 6 (lower is better) Translates to: LIQLGSSPLVLCSPG*PSLQLLSVDFGGLA Trigger: CGCCAGCCCACCAAAGTCCACTGACAGGAGTTGTAGAGAAGGCAAGCCGGGTGAGCACAACACCAGAGGAGAAGATCCTAACTGGATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS CCA 72 bp | CATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTaGGTTGTTTTTCTCTATCAACGTCCGGCGCCGCCG | + |
Preference number: 6 (lower is better) Translates to: HSQHCFQRRRLR*VVFLYQRPAPP Trigger: CGGCGGCGCCGGACGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673917.1 |
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CDS CAA 72 bp | CGCTTCCCATTCAGCTCTGGATCTGGAACTGGCCCCTaGTCTGAATTCTGCCTCCTCAAAAGTGGCGAACCT | + |
Preference number: 6 (lower is better) Translates to: RFPFSSGSGTGP*SEFCLLKSGEP Trigger: AGGTTCGCCACTTTTGAGGAGGCAGAATTCAGACAAGGGGCCAGTTCCAGATCCAGAGCTGAATGGGAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS CAA 72 bp | CTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTGGGTaGTTTTTCTCTATCAACGGGCGTGGGCTCCAGCCA | + |
Preference number: 6 (lower is better) Translates to: LSIVFREGAFAG*FFSINGRGLQP Trigger: TGGCTGGAGCCCACGCCCGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673744.1 |
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CDS GCA 72 bp | CCGTTGATCCAGTTAGGATCTTCTCCTCTGGTGTTGTaGTCACCCGGCTTGCCTTCTCTACAACTCCTGTCA | + |
Preference number: 6 (lower is better) Translates to: PLIQLGSSPLVL*SPGLPSLQLLS Trigger: TGACAGGAGTTGTAGAGAAGGCAAGCCGGGTGAGCACAACACCAGAGGAGAAGATCCTAACTGGATCAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS CCA 72 bp | CATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTaGGTTGTTTTTCTCTATCAACTGCCGTCCGGCGCC | + |
Preference number: 6 (lower is better) Translates to: HSQHCFQRRRLR*VVFLYQLPSGA Trigger: GGCGCCGGACGGCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396345.1 |
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CDS CAA 72 bp | AGTCCGTTGATCCAGTTAGGATCTTCTCCTCTGGTGTaGTGCTCACCCGGCTTGCCTTCTCTACAACTCCTG | + |
Preference number: 6 (lower is better) Translates to: SPLIQLGSSPLV*CSPGLPSLQLL Trigger: CAGGAGTTGTAGAGAAGGCAAGCCGGGTGAGCACAACACCAGAGGAGAAGATCCTAACTGGATCAACGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS CCA 72 bp | CATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTaGGTTGTTTTTCTCTATCAACGGGCGTGGGCTCCA | + |
Preference number: 6 (lower is better) Translates to: HSQHCFQRRRLR*VVFLYQRAWAP Trigger: TGGAGCCCACGCCCGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673744.1 |
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CDS CAA 72 bp | TTAGGATCTTCTCCTCTGGTGTTGTGCTCACCCGGCTaGCCTTCTCTACAACTCCTGTCAGTGGACTTTGGT | + |
Preference number: 6 (lower is better) Translates to: LGSSPLVLCSPG*PSLQLLSVDFG Trigger: ACCAAAGTCCACTGACAGGAGTTGTAGAGAAGGCAAGCCGGGTGAGCACAACACCAGAGGAGAAGATCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465941.1 |
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CDS CCA 72 bp | CATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTaGGTTGTTTTTCTCTATCAACTTACGGCACCAGGG | + |
Preference number: 6 (lower is better) Translates to: HSQHCFQRRRLR*VVFLYQLTAPG Trigger: CCCTGGTGCCGTAAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487384.5 |
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CDS CAA 72 bp | CTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTGGGTaGTTTTTCTCTATCAACTGGAGGAGAACCACAAGC | + |
Preference number: 6 (lower is better) Translates to: LSIVFREGAFAG*FFSINWRRTTS Trigger: GCTTGTGGTTCTCCTCCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS CAA 72 bp | CTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTGGGTaGTTTTTCTCTATCAACTTACGGCACCAGGGCTAT | + |
Preference number: 6 (lower is better) Translates to: LSIVFREGAFAG*FFSINLRHQGY Trigger: ATAGCCCTGGTGCCGTAAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487384.5 |
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CDS CAA 90 bp | GCTCTCATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTGGGTaGTTTTTCTCTATCAACTGGAGGAGAACCACAAGCATAGTCAGT | + |
Preference number: 6 (lower is better) Translates to: ALILSIVFREGAFAG*FFSINWRRTTSIVS Trigger: ACTGACTATGCTTGTGGTTCTCCTCCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATGAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS GCA 72 bp | GAGACGATTTCAACTGAAGTAATGAAGGCAGTGTCGTaGTGTCGAGAGAAAGGTGGATCCCAACAACAGGAA | + |
Preference number: 6 (lower is better) Translates to: ETISTEVMKAVS*CREKGGSQQQE Trigger: TTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAATCGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489695.1 |
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CDS CCA 72 bp | CATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTaGGTTGTTTTTCTCTATCAACTGGAGGAGAACCAC | + |
Preference number: 6 (lower is better) Translates to: HSQHCFQRRRLR*VVFLYQLEENH Trigger: GTGGTTCTCCTCCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343483.7 |
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CDS CAA 72 bp | CTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTGGGTaGTTTTTCTCTATCAACTGGAGACGATTTCAACTG | + |
Preference number: 6 (lower is better) Translates to: LSIVFREGAFAG*FFSINWRRFQL Trigger: CAGTTGAAATCGTCTCCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489695.1 |
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CDS CCA 72 bp | CATTCTCAGCATTGTTTTCAGAGAAGGCGCCTTCGCTaGGTTGTTTTTCTCTATCAACTGGAGACGATTTCA | + |
Preference number: 6 (lower is better) Translates to: HSQHCFQRRRLR*VVFLYQLETIS Trigger: TGAAATCGTCTCCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATGCTGAGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489695.1 |