Pregenerated sensors for HOXA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000105996Ensembl transcript IDs: ENST00000222718.7, ENST00000612779.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTGAAGGCAAAACCACCTaGTCAAAGGAGTTTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: TFLQASYCSQESHKGLLSEGKTT*SKEFLF Trigger: AAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTC...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR TCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTGCGCCGTGGCGAGGGTaGCTGCCGGGGTTCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFAPWRG*LPGFRL Trigger: CAGCCTGAACCCCGGCAGTCACCCTCGCCACGGCGC...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR TCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTGGGATTCTTTGTGGCTaGGGCAAGCAGGGCCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSGILCG*GKQGRW Trigger: CCACCGGCCCTGCTTGCCTCAGCCACAAAGAATCCC...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR GCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTGCGATCCCCCGCCGCTaGCATCGGCGATTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFAIPRR*HRRFPG Trigger: CCCTGGAAATCGCCGATGGCAGCGGCGGGGGATCGC...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTTCCAGGGATTCTTTGTaGCTGAGGCAAGCAGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSSRDSL*LRQAGP Trigger: CGGCCCTGCTTGCCTCAGCCACAAAGAATCCCTGGA...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR GCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTGGCGGCCGGCAGAAGTaGGGTTTTCTTGGCCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFGGRQK*GFLGRL Trigger: AAGGCGGCCAAGAAAACCGCACTTCTGCCGGCCGCC...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR GCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTTCCTTGCACTGGGTCTaGCTCTTGTGCTTCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSSLHWV*LLCFIL Trigger: GAGGATGAAGCACAAGAGGCAGACCCAGTGCAAGGA...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTCCAGCTCCACAGTTCTaGCCCATTGTTGACAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSPAPQF*PIVDKQ Trigger: CTGCTTGTCAACAATGGGCCAGAACTGTGGAGCTGG...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR TCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTGTTCTGGCCCATTGTTaGCAAGCAGTTGGGAACAGT | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSVLAHC*QAVGNS Trigger: ACTGTTCCCAACTGCTTGTCAACAATGGGCCAGAAC...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR GCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTGAGACGCTAAGGGCTTaGTCAAAGAGCGTCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSETLRA*SKSVFS Trigger: AGAGAAGACGCTCTTTGAGCAAGCCCTTAGCGTCTC...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTGAAGTGCGGTTTTCTTaGCCGCCTTCTTCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSEVRFS*PPSSPS Trigger: TGAAGGAGAAGAAGGCGGCCAAGAAAACCGCACTTC...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTGAGACTGGGAAACTTTaGGAGTCGCCATTGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSETGKL*ESPLCP Trigger: TGGACACAATGGCGACTCCCAAAGTTTCCCAGTCTC...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR TCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTGTTGGGAACAGTGGGTaGCTGGTGCTGAAAATGTTT | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSVGNSG*LVLKMF Trigger: AAACATTTTCAGCACCAGTCACCCACTGTTCCCAAC...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTTGCCGGGGTTCAGGCTaGGAATGGTCTGCTCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFCRGSG*EWSAQK Trigger: CTTTTGAGCAGACCATTCCCAGCCTGAACCCCGGCA...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTCTAGAAGCTGTGTGTTaGTGTAAGCAGTTCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSLEAVC*CKQFSG Trigger: GCCTGAGAACTGCTTACACCAACACACAGCTTCTAG...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTTTCCCTTCGCTGTTTTaGTTTTCCTTGCACTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSFPSLF*FSLHWV Trigger: GACCCAGTGCAAGGAAAACCAAAACAGCGAAGGGAA...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTGGGAACCTGGCAAACTaGGTGAAACTGCATCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSGNLAN*VKLHLK Trigger: TTTCAGATGCAGTTTCACCCAGTTTGCCAGGTTCCC...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR GCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTACTGCATCTGAAAGCTaGAGGCAGGAATCTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFTASES*RQESVE Trigger: CTCCACAGATTCCTGCCTGCAGCTTTCAGATGCAGT...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTTCATGGCCTTCTCCTTaGAGCCCCCTCAGAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFSWPSP*SPLREK Trigger: TTTTTCTCTGAGGGGGCTCCAAGGAGAAGGCCATGA...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTTGGTTTTCCTTGCACTaGGTCTGCCTCTTGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFWFSLH*VCLLCF Trigger: GAAGCACAAGAGGCAGACCCAGTGCAAGGAAAACCA...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTGATTTTTCTCATTGCTaGTTAAAGGCGAGACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSDFSHC*LKARLG Trigger: TCCCAGTCTCGCCTTTAACCAGCAATGAGAAAAATC...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR TCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTAAAGCGTCGAGGTCTTaGTTGATGAACTTTGAAATG | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSKASRS*LMNFEM Trigger: CATTTCAAAGTTCATCAATCAAGACCTCGACGCTTT...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR TCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTAATCAGTGTCGAGTGTaGAAGCGTCGAGGTCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFNQCRV*KRRGLD Trigger: ATCAAGACCTCGACGCTTTCACACTCGACACTGATT...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR GCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTTCAGATTTTTCTCATTaGTGGTTAAAGGCGAGACTG | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSSDFSH*WLKARL Trigger: CAGTCTCGCCTTTAACCAGCAATGAGAAAAATCTGA...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR GCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTAAAACGCTAAAGTCCTaGAAAGAGGGGACCTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFKTLKS*KEGTSR Trigger: CCTTGAGGTCCCCTCTTTGCAGGACTTTAGCGTTTT...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTCAAATTCGTAATTCATaGCCTTCTCCTTGGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFQIRNS*PSPWSP Trigger: GGGGCTCCAAGGAGAAGGCCATGAATTACGAATTTG...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR TCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTGAAGATACAATTATATaGTCACTTTCTTGCAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSEDTII*SLSCRP Trigger: AGGCCTGCAAGAAAGTGATCATATAATTGTATCTTC...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR GCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTTGTTTTGGTTTTCCTTaGACTGGGTCTGCCTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFCFGFP*TGSASC Trigger: ACAAGAGGCAGACCCAGTGCAAGGAAAACCAAAACA...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR GCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTTTGCAGGCCTCATACTaGTCTCAGGAATCACATAAA | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFLQASY*SQESHK Trigger: TTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAA...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CCA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTATAATCTGTAAAAGATaGCTCTGTTTGAAACTGGGT | + |
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Preference number: 4 (lower is better) Translates to: TFLQASYCSQESHKGLLSIICKR*LCLKLG Trigger: ACCCAGTTTCAAACAGAGCCATCTTTTACAGATTAT...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR TCA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTTTGATTGATGAACTTTaGAATGTATCAGCGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: KEGKTTWSKEFLFGDALFLIDEL*NVSATG Trigger: CCCTGTCGCTGATACATTTCAAAGTTCATCAATCAA...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS GCA 90 bp | TTCTTGGCCGCCTTCTTCTCCTTCATCCAGGGGTACTCGGGCGGCTaGAGGGCGCCGGCGGGCACCGGGCTGCCGCGGCTGCCCGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: FLAAFFSFIQGYSGG*RAPAGTGLPRLPAG Trigger: CCCCGCGGGCAGCCGCGGCAGCCCGGTGCCCGCCGGCGCCCTGCAGCCGCCCGAGTACCCCTGGATGAAGGAGAAGAAGGCGGCCAAGAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CCA 90 bp | CGGCGGTGGCGGCGGCGGCGGCGGCCGGCAGAAGTGCGGTTTTCTTaGCCGCCTTCTTCTCCTTCATCCAGGGGTACTCGGGCGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: RRWRRRRRPAEVRFS*PPSSPSSRGTRAAA Trigger: TGCAGCCGCCCGAGTACCCCTGGATGAAGGAGAAGAAGGCGGCCAAGAAAACCGCACTTCTGCCGGCCGCCGCCGCCGCCGCCACCGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS GCA 90 bp | GATTTCCAGGGATTCTTTGTGGCTGAGGCAAGCAGGGCCGGTGGCTaGGGCGGTGGCGGCGGCGGCGGCGGCCGGCAGAAGTGCGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: DFQGFFVAEASRAGG*GGGGGGGGRQKCGF Trigger: AAAACCGCACTTCTGCCGGCCGCCGCCGCCGCCGCCACCGCCGCAGCCACCGGCCCTGCTTGCCTCAGCCACAAAGAATCCCTGGAAATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS TCA 90 bp | GGAGAAGGAAGAGGGTCCCAGAGACCTGGGGCCAAGTCTTTGGACTaGCCTTTGTGGCTGAGGCAAGCAGGGCCGGTGGCTGCGGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: GEGRGSQRPGAKSLD*PLWLRQAGPVAAAV Trigger: CACCGCCGCAGCCACCGGCCCTGCTTGCCTCAGCCACAAAGGTCAGTCCAAAGACTTGGCCCCAGGTCTCTGGGACCCTCTTCCTTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612779.1 |
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| CDS CCA 90 bp | GCCACTCTCGGGGCAGCCCGGAGAAGGAAGAGGGTCCCAGAGACCTaGGGCCAAGTCTTTGGACTGACCTTTGTGGCTGAGGCAAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: ATLGAARRRKRVPET*GQVFGLTFVAEASR Trigger: CCTGCTTGCCTCAGCCACAAAGGTCAGTCCAAAGACTTGGCCCCAGGTCTCTGGGACCCTCTTCCTTCTCCGGGCTGCCCCGAGAGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612779.1 |
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| CDS CCA 90 bp | TCAAGGGCCTCAGGACTGTCATTGTTTAGGCCAGCTCCACAGTTCTaGCCCATTGTTGACAAGCAGTTGGGAACAGTGGGTGACTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SRASGLSLFRPAPQF*PIVDKQLGTVGDWC Trigger: GCACCAGTCACCCACTGTTCCCAACTGCTTGTCAACAATGGGCCAGAACTGTGGAGCTGGCCTAAACAATGACAGTCCTGAGGCCCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CCA 90 bp | TCTGCGGAAAGGGAAACCAACAAGAGACACACGCACAGTTGGAGGTaGAGGGGTCCGAGCGGGGTTATTCCACTGGAGAATAAATATAGC | + |
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Preference number: 5 (lower is better) Translates to: SAERETNKRHTHSWR*RGPSGVIPLENKYS Trigger: GCTATATTTATTCTCCAGTGGAATAACCCCGCTCGGACCCCTCCACCTCCAACTGTGCGTGTGTCTCTTGTTGGTTTCCCTTTCCGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612779.1 |
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| CDS GCA 90 bp | TCTGAAAGCTGCAGGCAGGAATCTGTGGAGAAAACGCTAAAGTCCTaGAAAGAGGGGACCTCAAGGGCCTCAGGACTGTCATTGTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: SESCRQESVEKTLKS*KEGTSRASGLSLFR Trigger: CCTAAACAATGACAGTCCTGAGGCCCTTGAGGTCCCCTCTTTGCAGGACTTTAGCGTTTTCTCCACAGATTCCTGCCTGCAGCTTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS GCA 90 bp | CTGTCGAGGGAACCTGGCAAACTGGGTGAAACTGCATCTGAAAGCTaGAGGCAGGAATCTGTGGAGAAAACGCTAAAGTCCTGCAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: LSREPGKLGETASES*RQESVEKTLKSCKE Trigger: CTCTTTGCAGGACTTTAGCGTTTTCTCCACAGATTCCTGCCTGCAGCTTTCAGATGCAGTTTCACCCAGTTTGCCAGGTTCCCTCGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CCA 90 bp | TTAAAGGCGAGACTGGGAAACTTTGGGAGTCGCCATTGTGTCCATTaGGAGCCTGCTGCTGAGAGAGGGCATTTTGCTGAAAAGTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: LKARLGNFGSRHCVH*EPAAERGHFAEKCS Trigger: GCTACACTTTTCAGCAAAATGCCCTCTCTCAGCAGCAGGCTCCCAATGGACACAATGGCGACTCCCAAAGTTTCCCAGTCTCGCCTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS-3UTR CAA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTCACTGGGTCTGCCTCTaGTGCTTCATCCTCCGGTTC | + |
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Preference number: 5 (lower is better) Translates to: TFLQASYCSQESHKGLLSHWVCL*CFILRF Trigger: GAACCGGAGGATGAAGCACAAGAGGCAGACCCAGTG...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTCTTTGGGAGTCGCCATaGTGTCCATTGGGAGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: TFLQASYCSQESHKGLLSLWESP*CPLGAC Trigger: GCAGGCTCCCAATGGACACAATGGCGACTCCCAAAG...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTCGAGACTGGGAAACTTaGGGAGTCGCCATTGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: TFLQASYCSQESHKGLLSRDWET*GVAIVS Trigger: GGACACAATGGCGACTCCCAAAGTTTCCCAGTCTCG...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTGCCTCAGGACTGTCATaGTTTAGGCCAGCTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: TFLQASYCSQESHKGLLSASGLS*FRPAPQ Trigger: CTGTGGAGCTGGCCTAAACAATGACAGTCCTGAGGC...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS CCA 90 bp | CAGCTCCACAGTTCTGGCCCATTGTTGACAAGCAGTTGGGAACAGTaGGTGACTGGTGCTGAAAATGTTTCAGATTTTTCTCATTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: QLHSSGPLLTSSWEQ*VTGAENVSDFSHCW Trigger: CCAGCAATGAGAAAAATCTGAAACATTTTCAGCACCAGTCACCCACTGTTCCCAACTGCTTGTCAACAATGGGCCAGAACTGTGGAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS-3UTR CAA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTAGAGACGCTAAGGGCTaGCTCAAAGAGCGTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: TFLQASYCSQESHKGLLSRDAKG*LKERLL Trigger: GAGAAGACGCTCTTTGAGCAAGCCCTTAGCGTCTCT...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTTTCATGGCCTTCTCCTaGGAGCCCCCTCAGAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: KEGKTTWSKEFLFGDALFFMAFS*EPPQRK Trigger: TTTTCTCTGAGGGGGCTCCAAGGAGAAGGCCATGAA...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTAGAAGTGCGGTTTTCTaGGCCGCCTTCTTCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: KEGKTTWSKEFLFGDALFRSAVF*AAFFSF Trigger: GAAGGAGAAGAAGGCGGCCAAGAAAACCGCACTTCT...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTATTTCCAGGGATTCTTaGTGGCTGAGGCAAGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: KEGKTTWSKEFLFGDALFISRDS*WLRQAG Trigger: CCCTGCTTGCCTCAGCCACAAAGAATCCCTGGAAAT...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTAAACCACACTTTCACTaGTCTCTCAGTCAAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: TFLQASYCSQESHKGLLSKPHFH*SLSQIQ Trigger: CTGGATTTGACTGAGAGACAAGTGAAAGTGTGGTTT...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTCTGTTTTGGTTTTCCTaGCACTGGGTCTGCCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: KEGKTTWSKEFLFGDALFLFWFS*HWVCLL Trigger: CAAGAGGCAGACCCAGTGCAAGGAAAACCAAAACAG...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTATTGTTGACAAGCAGTaGGGAACAGTGGGTGACTGG | + |
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Preference number: 5 (lower is better) Translates to: KEGKTTWSKEFLFGDALFIVDKQ*GTVGDW Trigger: CCAGTCACCCACTGTTCCCAACTGCTTGTCAACAAT...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTAGTTCTGGCCCATTGTaGACAAGCAGTTGGGAACAG | + |
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Preference number: 5 (lower is better) Translates to: KEGKTTWSKEFLFGDALFSSGPL*TSSWEQ Trigger: CTGTTCCCAACTGCTTGTCAACAATGGGCCAGAACT...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTCACAGTTCTGGCCCATaGTTGACAAGCAGTTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: KEGKTTWSKEFLFGDALFHSSGP*LTSSWE Trigger: TTCCCAACTGCTTGTCAACAATGGGCCAGAACTGTG...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTTTTCCCTTCGCTGTTTaGGTTTTCCTTGCACTGGGT | + |
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Preference number: 5 (lower is better) Translates to: KEGKTTWSKEFLFGDALFFPFAV*VFLALG Trigger: ACCCAGTGCAAGGAAAACCAAAACAGCGAAGGGAAA...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTCTGAGAGAGGGCATTTaGCTGAAAAGTGTAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: KEGKTTWSKEFLFGDALFLREGI*LKSVAF Trigger: GAAGGCTACACTTTTCAGCAAAATGCCCTCTCTCAG...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | ACTTTCTTGCAGGCCTCATACTGCTCTCAGGAATCACATAAAGGGTTGTTGAGTCAAAGGAGTTTTTGTTaGGTGATGCTTTGTTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: TFLQASYCSQESHKGLLSQRSFC*VMLCFA Trigger: AGCAAAACAAAGCATCACCAAACAAAAACTCCTTTG...ACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGCAAGAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS-3UTR CAA 90 bp | AAAGAAGGCAAAACCACCTGGTCAAAGGAGTTTTTGTTTGGTGATGCTTTGTTTTATATGATCACTTTCTaGCAGGCCTCATACTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: KEGKTTWSKEFLFGDALFYMITF*QASYCS Trigger: AGAGCAGTATGAGGCCTGCAAGAAAGTGATCATATA...AAACAAAGCATCACCAAACAAAAACTCCTTTGACCAGGTGGTTTTGCCTTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS CAA 90 bp | GCGGCGGTGGCGGCGGCGGCGGCGGCCGGCAGAAGTGCGGTTTTCTaGGCCGCCTTCTTCTCCTTCATCCAGGGGTACTCGGGCGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AAVAAAAAAGRSAVF*AAFFSFIQGYSGGC Trigger: GCAGCCGCCCGAGTACCCCTGGATGAAGGAGAAGAAGGCGGCCAAGAAAACCGCACTTCTGCCGGCCGCCGCCGCCGCCGCCACCGCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CAA 72 bp | CCCCCGCCGCTGCCATCGGCGATTTCCAGGGATTCTTaGTGGCTGAGGCAAGCAGGGCCGGTGGCTGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: PPPLPSAISRDS*WLRQAGPVAAA Trigger: CGCCGCAGCCACCGGCCCTGCTTGCCTCAGCCACAAAGAATCCCTGGAAATCGCCGATGGCAGCGGCGGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS CCA 72 bp | CCGCCGCTGCCATCGGCGATTTCCAGGGATTCTTTGTaGCTGAGGCAAGCAGGGCCGGTGGCTGCGGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: PPLPSAISRDSL*LRQAGPVAAAV Trigger: CACCGCCGCAGCCACCGGCCCTGCTTGCCTCAGCCACAAAGAATCCCTGGAAATCGCCGATGGCAGCGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222718.7 |
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| CDS CAA 72 bp | GCGGCGGCGGCGGCGGCCGGCAGAAGTGCGGTTTTCTaGGCCGCCTTCTTCTCCTTCATCCAGGGGTACTCG | + |
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Preference number: 6 (lower is better) Translates to: AAAAAAGRSAVF*AAFFSFIQGYS Trigger: CGAGTACCCCTGGATGAAGGAGAAGAAGGCGGCCAAGAAAACCGCACTTCTGCCGGCCGCCGCCGCCGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS GCA 72 bp | TGTAAGCAGTTCTCAGGCGCCGCGATCCCCCGCCGCTaGCATCGGCGATTTCCAGGGATTCTGCGGAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: CKQFSGAAIPRR*HRRFPGILRKG Trigger: CCCTTTCCGCAGAATCCCTGGAAATCGCCGATGGCAGCGGCGGGGGATCGCGGCGCCTGAGAACTGCTTACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612779.1 |
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| CDS TCA 72 bp | AGAGGGTCCCAGAGACCTGGGGCCAAGTCTTTGGACTaGCCTTTGTGGCTGAGGCAAGCAGGGCCGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RGSQRPGAKSLD*PLWLRQAGPVA Trigger: AGCCACCGGCCCTGCTTGCCTCAGCCACAAAGGTCAGTCCAAAGACTTGGCCCCAGGTCTCTGGGACCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612779.1 |
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| CDS CAA 72 bp | TTCCCTCTCCAGAAGGGCCCCAGAGACGCTAAGGGCTaGCTCAAAGAGCGTCTTCTCTTCCTCGTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FPLQKGPRDAKG*LKERLLFLVLL Trigger: GAGGAGGACGAGGAAGAGAAGACGCTCTTTGAGCAAGCCCTTAGCGTCTCTGGGGCCCTTCTGGAGAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CAA 90 bp | GTCGCCATTGTGTCCATTGGGAGCCTGCTGCTGAGAGAGGGCATTTaGCTGAAAAGTGTAGCCTTCCCTCTCCAGAAGGGCCCCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: VAIVSIGSLLLREGI*LKSVAFPLQKGPRD Trigger: GTCTCTGGGGCCCTTCTGGAGAGGGAAGGCTACACTTTTCAGCAAAATGCCCTCTCTCAGCAGCAGGCTCCCAATGGACACAATGGCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CAA 90 bp | AGTGTAGCCTTCCCTCTCCAGAAGGGCCCCAGAGACGCTAAGGGCTaGCTCAAAGAGCGTCTTCTCTTCCTCGTCCTCCTCTACTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SVAFPLQKGPRDAKG*LKERLLFLVLLYFL Trigger: GAGAAAGTAGAGGAGGACGAGGAAGAGAAGACGCTCTTTGAGCAAGCCCTTAGCGTCTCTGGGGCCCTTCTGGAGAGGGAAGGCTACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CAA 90 bp | CTAAAGTCCTGCAAAGAGGGGACCTCAAGGGCCTCAGGACTGTCATaGTTTAGGCCAGCTCCACAGTTCTGGCCCATTGTTGACAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LKSCKEGTSRASGLS*FRPAPQFWPIVDKQ Trigger: CTGCTTGTCAACAATGGGCCAGAACTGTGGAGCTGGCCTAAACAATGACAGTCCTGAGGCCCTTGAGGTCCCCTCTTTGCAGGACTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CCA 72 bp | TTCTCATTGCTGGTTAAAGGCGAGACTGGGAAACTTTaGGAGTCGCCATTGTGTCCATTGGGAGCCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FSLLVKGETGKL*ESPLCPLGACC Trigger: GCAGCAGGCTCCCAATGGACACAATGGCGACTCCCAAAGTTTCCCAGTCTCGCCTTTAACCAGCAATGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CAA 72 bp | CATTGTTTAGGCCAGCTCCACAGTTCTGGCCCATTGTaGACAAGCAGTTGGGAACAGTGGGTGACTGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: HCLGQLHSSGPL*TSSWEQWVTGA Trigger: AGCACCAGTCACCCACTGTTCCCAACTGCTTGTCAACAATGGGCCAGAACTGTGGAGCTGGCCTAAACAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CAA 90 bp | CCTCAGGACTGTCATTGTTTAGGCCAGCTCCACAGTTCTGGCCCATaGTTGACAAGCAGTTGGGAACAGTGGGTGACTGGTGCTGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: PQDCHCLGQLHSSGP*LTSSWEQWVTGAEN Trigger: ATTTTCAGCACCAGTCACCCACTGTTCCCAACTGCTTGTCAACAATGGGCCAGAACTGTGGAGCTGGCCTAAACAATGACAGTCCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS GCA 72 bp | CACTTTCACTTGTCTCTCAGTCAAATCCAGCAGCGCTaGAATCTCCACCCTTCGGGGTCTGCAAAGGTACTT | + |
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Preference number: 6 (lower is better) Translates to: HFHLSLSQIQQR*NLHPSGSAKVL Trigger: AAGTACCTTTGCAGACCCCGAAGGGTGGAGATTGCAGCGCTGCTGGATTTGACTGAGAGACAAGTGAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CCA 72 bp | TCAGGACTGTCATTGTTTAGGCCAGCTCCACAGTTCTaGCCCATTGTTGACAAGCAGTTGGGAACAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SGLSLFRPAPQF*PIVDKQLGTVG Trigger: ACCCACTGTTCCCAACTGCTTGTCAACAATGGGCCAGAACTGTGGAGCTGGCCTAAACAATGACAGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CAA 90 bp | CAGGACTGTCATTGTTTAGGCCAGCTCCACAGTTCTGGCCCATTGTaGACAAGCAGTTGGGAACAGTGGGTGACTGGTGCTGAAAATGTT | + |
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Preference number: 6 (lower is better) Translates to: QDCHCLGQLHSSGPL*TSSWEQWVTGAENV Trigger: AACATTTTCAGCACCAGTCACCCACTGTTCCCAACTGCTTGTCAACAATGGGCCAGAACTGTGGAGCTGGCCTAAACAATGACAGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS GCA 72 bp | GAACCTGGCAAACTGGGTGAAACTGCATCTGAAAGCTaGAGGCAGGAATCTGTGGAGAAAACGCTAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: EPGKLGETASES*RQESVEKTLKS Trigger: GGACTTTAGCGTTTTCTCCACAGATTCCTGCCTGCAGCTTTCAGATGCAGTTTCACCCAGTTTGCCAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CCA 72 bp | CAGCTCCACAGTTCTGGCCCATTGTTGACAAGCAGTTaGGAACAGTGGGTGACTGGTGCTGAAAATGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: QLHSSGPLLTSS*EQWVTGAENVS Trigger: TGAAACATTTTCAGCACCAGTCACCCACTGTTCCCAACTGCTTGTCAACAATGGGCCAGAACTGTGGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CCA 72 bp | AAATATCTACGGGACTGTCGAGGGAACCTGGCAAACTaGGTGAAACTGCATCTGAAAGCTGCAGGCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: KYLRDCRGNLAN*VKLHLKAAGRN Trigger: ATTCCTGCCTGCAGCTTTCAGATGCAGTTTCACCCAGTTTGCCAGGTTCCCTCGACAGTCCCGTAGATATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS CAA 90 bp | TACTTTCTCGGAGTCCTCAAGGCTTTTACATTTCCCTTCGCTGTTTaGGTTTTCCTTGCACTGGGTCTGCCTCTTGTGCTTCATCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: YFLGVLKAFTFPFAV*VFLALGLPLVLHPP Trigger: CGGAGGATGAAGCACAAGAGGCAGACCCAGTGCAAGGAAAACCAAAACAGCGAAGGGAAATGTAAAAGCCTTGAGGACTCCGAGAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS TCA 72 bp | GAGGAATCAGTGTCGAGTGTGAAAGCGTCGAGGTCTTaGTTGATGAACTTTGAAATGTATCAGCGACAGGGG | + |
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Preference number: 6 (lower is better) Translates to: EESVSSVKASRS*LMNFEMYQRQG Trigger: CCCCTGTCGCTGATACATTTCAAAGTTCATCAATCAAGACCTCGACGCTTTCACACTCGACACTGATTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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| CDS GCA 72 bp | GTGACTGGTGCTGAAAATGTTTCAGATTTTTCTCATTaGTGGTTAAAGGCGAGACTGGGAAACTTTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: VTGAENVSDFSH*WLKARLGNFGS Trigger: ACTCCCAAAGTTTCCCAGTCTCGCCTTTAACCAGCAATGAGAAAAATCTGAAACATTTTCAGCACCAGTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222718.7 ENST00000612779.1 |
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