RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HNF1A (Homo sapiens)

Ensembl gene IDs: ENSG00000135100

Ensembl transcript IDs: ENST00000257555.11, ENST00000400024.6, ENST00000402929.5, ENST00000538626.2, ENST00000538646.5, ENST00000540108.1, ENST00000541395.5, ENST00000541924.5, ENST00000543255.1, ENST00000543427.5, ENST00000544413.2, ENST00000544574.5, ENST00000560968.5, ENST00000615446.4, ENST00000617366.4

Found 1184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCTGGAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTaGAGGTGCTGGATGCTGGCAGGGTCCTGGCTGGGGACGTGGAGG +
Preference number: 1 (lower is better)
Translates to: LLEDTVGLALSRWAG*RCWMLAGSWLGTWR
Trigger: CCTCCACGTCCCCAGCCAGGACCCTGCCAGCATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTCCAGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR GCA 90 bp CAGCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTaGCTTGTGAGCTCAGCTACTCCTGCCCCAAACAAGGGCAGGGTC +
Preference number: 1 (lower is better)
Translates to: QLGQFPGPAQLLGPC*LVSSATPAPNKGRV
Trigger: GACCCTGCCCTTGTTTGGGGCAGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR CCA 90 bp CTCTCCACGACCCCCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTaGGGCGCCTCAGAGCCCTCCCTTTCTGATGCATCAGAGCAGAGT +
Preference number: 1 (lower is better)
Translates to: LSTTPSCAPRAASTG*GASEPSLSDASEQS
Trigger: ACTCTGCTCTGATGCATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAGGAGGGGGTCGTGGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR GCA 90 bp CGAGACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTaGGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGT +
Preference number: 1 (lower is better)
Translates to: RDRGAAPPGPGLGTG*EAPTGVRTTSQPRS
Trigger: ACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR GCA 90 bp TGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTaGCCCAAACAAGGGCAGGGTCTGCAGGGCGCTCGAGACAGAGGA +
Preference number: 1 (lower is better)
Translates to: CSAARALLPCELSYS*PKQGQGLQGARDRG
Trigger: TCCTCTGTCTCGAGCGCCCTGCAGACCCTGCCCTTGTTTGGGGCAGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR CCA 90 bp TGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTaGGGGTGCCCAAGTCATAGGCCGCCCCCTTCAGTTCCAAGTAAG +
Preference number: 1 (lower is better)
Translates to: CQSGVAVPGLSIGPG*GCPSHRPPPSVPSK
Trigger: CTTACTTGGAACTGAAGGGGGCGGCCTATGACTTGGGCACCCCCAGCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR GCA 90 bp TCAGCAGGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTaGCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: SAGHSYTGLCPEKCG*QSGVAVPGLSIGPG
Trigger: GCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACCTGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR TCA 90 bp GTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTaGAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATG +
Preference number: 1 (lower is better)
Translates to: VTPGLFLNPRVDAVH*RPGSQQQAQGCGTM
Trigger: CATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR GCA 90 bp AGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGGGGGTaGCCAAGTCATAGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACT +
Preference number: 1 (lower is better)
Translates to: SGVAVPGLSIGPGWG*PSHRPPPSVPSKKT
Trigger: AGTCTTCTTACTTGGAACTGAAGGGGGCGGCCTATGACTTGGGCACCCCCAGCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR GCA 90 bp CCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTaGTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCA +
Preference number: 1 (lower is better)
Translates to: PCLSWVHRLLCPSWQ*SGPQTPQGGCELPS
Trigger: TGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR GCA 90 bp ACTGAAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATaGTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTGC +
Preference number: 1 (lower is better)
Translates to: TEGQVLSSRPRDVGP*LSWVHRLLCPSWQC
Trigger: GCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCCTTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR CCA 90 bp GTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTaGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTG +
Preference number: 1 (lower is better)
Translates to: VGPCLSWVHRLLCPS*QCSGPQTPQGGCEL
Trigger: CAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR CCA 90 bp TCACTAAGGGACCGCCGCTGCTTGAGGGTACTTCTGCAGTCTCACTaGTCGCAGGCTGTCCATAGCGCACACCGTGGACCTTACTGGGGG +
Preference number: 1 (lower is better)
Translates to: SLRDRRCLRVLLQSH*SQAVHSAHRGPYWG
Trigger: CCCCCAGTAAGGTCCACGGTGTGCGCTATGGACAGCCTGCGACCAGTGAGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCTTAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR TCA 90 bp AAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTaGTCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGC +
Preference number: 1 (lower is better)
Translates to: KEWPGGYIGDRTRPR*SRASQSSAGHSYTG
Trigger: GCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCCACTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR TCA 90 bp AGACTGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATaGACAGGCTTTGCTCCTAGCTCTCCACGACCCCCTCCTGTGCAC +
Preference number: 1 (lower is better)
Translates to: RLYPTKQRQSLLHLP*TGFAPSSPRPPPVH
Trigger: GTGCACAGGAGGGGGTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR TCA 90 bp TCTCATAGGCCTGGAACAGGATCTGCTGGGATGCTGGGCCCCACTTaGAACGGTTCCTCCGCCCCTTCTTGGTTGGTAGCTCATCACCTG +
Preference number: 1 (lower is better)
Translates to: SHRPGTGSAGMLGPT*NGSSAPSWLVAHHL
Trigger: CAGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATCCCAGCAGATCCTGTTCCAGGCCTATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR CCA 90 bp TCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTaGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCT +
Preference number: 1 (lower is better)
Translates to: SQPRSSLPSRGRRPG*PQRHDALGNKYRKA
Trigger: AGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR GCA 90 bp CACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTaGCAGGCACCCCTTTCCCCTGCATCCATTGACAGCCAACCTCTA +
Preference number: 1 (lower is better)
Translates to: HGNTLVPETHADCNA*QAPLSPASIDSQPL
Trigger: TAGAGGTTGGCTGTCAATGGATGCAGGGGAAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR GCA 90 bp ACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTaGAATGCCTGCCAGGCACCCCTTTCCCCTGCATCCATTGACAGC +
Preference number: 1 (lower is better)
Translates to: TLNHGNTLVPETHAD*NACQAPLSPASIDS
Trigger: GCTGTCAATGGATGCAGGGGAAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR GCA 90 bp TGCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATaGAGACTGCAATGCCTGCCAGGCACCCCTTTCCCCTGCATCCAT +
Preference number: 1 (lower is better)
Translates to: CRHPQSRKHTCPRDT*RLQCLPGTPFPCIH
Trigger: ATGGATGCAGGGGAAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR CCA 90 bp ATGGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTaGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACA +
Preference number: 1 (lower is better)
Translates to: MGSVQMACGSLAGRS*GRKEWPGGYIGDRT
Trigger: TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATGCTGACCGGCACACTCTGTaGCTGCGTGGAGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: GHCGAGAEPVGRLQVLDADRHTL*LRGGQA
Trigger: GGCCTGGCCTCCACGCAGGCACAGAGTGTGCCGGTC...AGCATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR TCA 90 bp GAGCATAGTCTGCGGGAGCAGGCCCGTGTGGGTGTACTGGGCCACCTCGGGCTTAGGCCAGGGGAGCTGTaGGCGGGCAGCGCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: EHSLREQARVGVLGHLGLRPGEL*AGSAGP
Trigger: GGGACCTGCGCTGCCCGCTCACAGCTCCCCTGGCCT...AAGCCCGAGGTGGCCCAGTACACCCACACGGGCCTGCTCCCGCAGACTATGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR GCA 90 bp CACCTCAGCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCAGGGTGGCTGCGAACTaGCCTCAGCCAGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: HLSLASSPALLSCSGLAARVAAN*PQPARP
Trigger: GGGCCTGGCTGGCTGAGGGCAGTTCGCAGCCACCCT...GGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGCTGAGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CACCTCAGCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCCGGCTGGCTACAAGCTaGAGGGGGTGCCGGGTCACC +
Preference number: 2 (lower is better)
Translates to: HLSLASSPALLSCSGLAARLATS*RGCRVT
Trigger: GGTGACCCGGCACCCCCTGCAGCTTGTAGCCAGCCG...GGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGCTGAGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GGCTGGGGACGTGGAGGGTGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTGGGGCCCCCAGCTGCTaGGACCAGCTTGGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: GWGRGGWWPEMPACEARTGAPSC*DQLGFC
Trigger: ACAGAAGCCAAGCTGGTCTCAGCAGCTGGGGGCCCC...AGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCACCCTCCACGTCCCCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR TCA 90 bp GAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATGATGCTGGGCCCCACTTaGAACGGTTCCTCCGCCCCT +
Preference number: 2 (lower is better)
Translates to: EDTVGLALSRWAGCRCWMMLGPT*NGSSAP
Trigger: AGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCAT...CATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR GCA 90 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGCGGCTGGCTACAAGCTaGAGGGGGTGCCGGGTCACC +
Preference number: 2 (lower is better)
Translates to: RSCPTRTWTWHGLRGSHRRLATS*RGCRVT
Trigger: GGTGACCCGGCACCCCCTGCAGCTTGTAGCCAGCCG...CCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATTGGCAGGGTCCTGGCTaGGGACGTGGAGGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: APRAASTGWGASEPSLSDWQGPG*GRGGWW
Trigger: CCACCACCCTCCACGTCCCCAGCCAGGACCCTGCCA...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR GCA 90 bp CTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCAGGAAGGGCCACGGTTaGTCGGCAGGCTCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: LCTPSSLHGLGRLRALPFRKGHG*SAGSGP
Trigger: AGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCT...GAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTACCAGTTCCCCGGCCCTaGTCAGCTGCTCGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: AAPPGPGLGTGCEAPTGVPVPRP*SAARAL
Trigger: CAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGG...TACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCGGAGGTCATGGGGCCTaGGAGAGGGAATCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPGGHGA*ERESLG
Trigger: CCCCAGCGATTCCCTCTCCCAGGCCCCATGACCTCC...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp CACCTCAGCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCGCAGGCCCAGGGATGTaGGACCATGCTTGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: HLSLASSPALLSCSGLAAAGPGM*DHACPG
Trigger: CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGC...GGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGCTGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGTCTGGGGCTGCTGGTTaGGGCCTGGGGATGTCTGCT +
Preference number: 2 (lower is better)
Translates to: RSCPTRTWTWHGLRGSHRSGAAG*GLGMSA
Trigger: AGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGA...CCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR TCA 90 bp GCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGTGGGGGCTCTGCAGCTaGGCCATGGTGGCCATGAAG +
Preference number: 2 (lower is better)
Translates to: AWPVPRPCSAARALLPCEWGLCS*AMVAMK
Trigger: CTTCATGGCCACCATGGCTCAGCTGCAGAGCCCCCA...CTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR GCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACAGGGTGGCTGCGAACTaGCCTCAGCCAGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDRVAAN*PQPARP
Trigger: GGGCCTGGCTGGCTGAGGGCAGTTCGCAGCCACCCT...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGACTCCTCAGGGTGGCTaGGAACTGCCCTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: RSCPTRTWTWHGLRGSHRTPQGG*ELPSAS
Trigger: GCTGGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGT...CCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp AAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGGCAGCCTCCACGGGTTaGGGCGCCTCAGAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: KARFSAAGPGMWDHACPGAASTG*GASEPS
Trigger: GGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGC...CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGGTGTGGCTGCCAGAGTaGTGTAGCGGTCCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: AWPVPRPCSAARALLPCEVWLPE*CSGPRA
Trigger: AGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC...CTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATACCAGGACCTGGACTTaGCACGGGTTGCGAGGCTCC +
Preference number: 2 (lower is better)
Translates to: APRAASTGWGASEPSLSDTRTWT*HGLRGS
Trigger: GGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATATGGCTCTGCACAGGTaGCATGAGCGGCTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: GGHCGAGAEPVGRLQVLDMALHR*HERLLV
Trigger: TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCAT...ATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR CCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGCCGGCTGCAGGTGCTaGATGCTGGCAGGGTCCTGG +
Preference number: 2 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDAGCRC*MLAGSW
Trigger: CCAGGACCCTGCCAGCATCCAGCACCTGCAGCCGGC...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR TCA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCCACAGGCCTGTGTCCTaGGAAGTGTGGCTGCCAGAG +
Preference number: 2 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPHRPVS*EVWLPE
Trigger: CTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTG...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCCCTGAGAAGTGTGGCTaGCAGAGTGGTGTAGCGGTC +
Preference number: 2 (lower is better)
Translates to: LCTPSSLHGLGRLRALPFPEKCG*QSGVAV
Trigger: GACCGCTACACCACTCTGGCAGCCACACTTCTCAGG...GAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTAGGGTGGCTGCGAACTaGCCTCAGCCAGCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTRVAAN*PQPARP
Trigger: GGGCCTGGCTGGCTGAGGGCAGTTCGCAGCCACCCT...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGTGATGAGCATAGTCTaGGGGAGCAGGCCCGTGTGG +
Preference number: 2 (lower is better)
Translates to: APRAASTGWGASEPSLSDVMSIV*GSRPVW
Trigger: CCACACGGGCCTGCTCCCGCAGACTATGCTCATCAC...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR CCA 90 bp GGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTGCAGCCTCCACGGGTTaGGGCGCCTCAGAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: GCEAPTGVRTTSQPRSSLAASTG*GASEPS
Trigger: GGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGC...AAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp CCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGCATGTGTGGCTGCCAGAGTaGTGTAGCGGTCCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: PEQPPRVGAPQSPPFLMHVWLPE*CSGPRA
Trigger: AGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC...ATGCATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAACCAGGACCTGGACTTaGCACGGGTTGCGAGGCTCC +
Preference number: 2 (lower is better)
Translates to: AAPPGPGLGTGCEAPTGVTRTWT*HGLRGS
Trigger: GGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT...TACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATGCTCTGCTGAGACCAGCTTaGCTTCTGTACTCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: GHCGAGAEPVGRLQVLDALLRPA*LLYSAG
Trigger: GCCTGCTGAGTACAGAAGCCAAGCTGGTCTCAGCAG...AGCATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CCA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCGGGCTCTGGGTCACATaGCTCTGCACAGGTGGCATG +
Preference number: 2 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPGLWVT*LCTGGM
Trigger: CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCC...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR CCA 90 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGGGCAGCAGGTGGCTCTaGCCATTGCTGGAGTCTGAG +
Preference number: 2 (lower is better)
Translates to: RSCPTRTWTWHGLRGSHRGSRWL*PLLESE
Trigger: CTCAGACTCCAGCAATGGCCAGAGCCACCTGCTGCC...CCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR CAA 90 bp TCGAGACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTaGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAG +
Preference number: 2 (lower is better)
Translates to: SRQRSCPTRTWTWHG*RGSHRSKDDFPAPK
Trigger: CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTCTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATCGGTGGGTACATTGGTaGCAGAACAAGGCCACGCTG +
Preference number: 2 (lower is better)
Translates to: APRAASTGWGASEPSLSDRWVHW*QNKATL
Trigger: CAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCG...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCCGGTGGGTACATTGGTaGCAGAACAAGGCCACGCTG +
Preference number: 2 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPRWVHW*QNKATL
Trigger: CAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCG...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGTAGACGCGGTACACTaGAGGCCAGGTTCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: APRAASTGWGASEPSLSDVDAVH*RPGSQQ
Trigger: CTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTAC...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTCTGGGGCTGCTGGTTaGGGCCTGGGGATGTCTGCT +
Preference number: 2 (lower is better)
Translates to: VAMKGLWVTWLCTGGMSGSGAAG*GLGMSA
Trigger: AGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGA...GCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
3UTR-3UTR TCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACTGGGGGCTCTGCAGCTaGGCCATGGTGGCCATGAAG +
Preference number: 2 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDWGLCS*AMVAMK
Trigger: CTTCATGGCCACCATGGCTCAGCTGCAGAGCCCCCA...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR GCA 90 bp GGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGAGGAAGGGCCACGGTTaGTCGGCAGGCTCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: GHEGALGHMALHRWHERLRKGHG*SAGSGP
Trigger: AGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCT...CAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR GCA 90 bp CCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCAGTCCCTCCTACATCTaGCATGAACAGGCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: PPVHPEQPPRVGAPQSPPSPSYI*HEQALL
Trigger: GAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACT...GGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCAAGCCAGGAGAGCCCTaGCTGCCTTCCCTGTTAGCT +
Preference number: 2 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPKPGEP*LPSLLA
Trigger: AGCTAACAGGGAAGGCAGGCAGGGCTCTCCTGGCTT...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTAACAAGGGCAGGGTCTaGAGGGCGCTCGAGACAGAG +
Preference number: 2 (lower is better)
Translates to: PGPAQLLGPCCLVSSATPNKGRV*RALETE
Trigger: CTCTGTCTCGAGCGCCCTGCAGACCCTGCCCTTGTT...AGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGCCGGCCCTGCTCAGCTaGTCGGGCCTTGCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGPALLS*SGLAAL
Trigger: CAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGG...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGCCGGCCCTGCTCAGCTaGTCGGGCCTTGCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: HPRPFPESQGRRGTLKARPALLS*SGLAAL
Trigger: CAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGG...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCCCAGTTCCCCGGCCCTaGTCAGCTGCTCGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSPVPRP*SAARAL
Trigger: CAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGG...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp AAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCGCCTGGAACAGGATCTaGTGGGATGCTGGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: KCGCQSGVAVPGLSIGPGAWNRI*WDAGPH
Trigger: GTGGGGCCCAGCATCCCAGCAGATCCTGTTCCAGGC...GCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CCA 90 bp ACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCCTTGCCCCACCAGGACCTaGACTTGGCACGGGTTGCGA +
Preference number: 2 (lower is better)
Translates to: TSQPRSSLPSRGRRPGWPCPTRT*TWHGLR
Trigger: TCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCA...AGGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTGGGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCTGGCAGGGTCCTGGCTaGGGACGTGGAGGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: GHPRPFPESQGRRGTLKAWQGPG*GRGGWW
Trigger: CCACCACCCTCCACGTCCCCAGCCAGGACCCTGCCA...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR CCA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTGGCAGGGTCCTGGCTaGGGACGTGGAGGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSWQGPG*GRGGWW
Trigger: CCACCACCCTCCACGTCCCCAGCCAGGACCCTGCCA...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR CCA 90 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGGTCTCGATGACGCTGTaGTTGGATGGCAGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: RSCPTRTWTWHGLRGSHRVSMTL*LDGSRW
Trigger: CCACCTGCTGCCATCCAACCACAGCGTCATCGAGAC...CCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR TCA 90 bp AAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCCACAGGCCTGTGTCCTaGGAAGTGTGGCTGCCAGAG +
Preference number: 2 (lower is better)
Translates to: KCGCQSGVAVPGLSIGPGHRPVS*EVWLPE
Trigger: CTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTG...GCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTCACAGGCCTGTGTCCTaGGAAGTGTGGCTGCCAGAG +
Preference number: 2 (lower is better)
Translates to: GTGCEAPTGVRTTSQPRSHRPVS*EVWLPE
Trigger: CTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTG...ACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp CCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCATCTGGGGCTGCTGGTTaGGGCCTGGGGATGTCTGCT +
Preference number: 2 (lower is better)
Translates to: PMTRVEAPVLVNVGPREASGAAG*GLGMSA
Trigger: AGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGA...TGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
3UTR-3UTR GCA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTAGGAAGGGCCACGGTTaGTCGGCAGGCTCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTRKGHG*SAGSGP
Trigger: AGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCT...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGCATGAGCTCAGCTACTCCTaGCCCAAACAAGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: PEQPPRVGAPQSPPFLMHELSYS*PKQGQG
Trigger: ACCCTGCCCTTGTTTGGGGCAGGAGTAGCTGAGCTC...ATGCATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTCCGGCCCTGCTCAGCTaGTCGGGCCTTGCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPPALLS*SGLAAL
Trigger: CAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGG...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp AGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCCAGTTCCCCGGCCCTaGTCAGCTGCTCGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: RDVGPCLSWVHRLLCPSWPVPRP*SAARAL
Trigger: CAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGG...CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCACAAGCTGCAGGGGGTaGCGGGTCACCCCAGGCCTT +
Preference number: 2 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSTSCRG*RVTPGL
Trigger: AAGGCCTGGGGTGACCCGGCACCCCCTGCAGCTTGT...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGGCTGCAGGTGCTGGATaGTGGCAGGGTCCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGAAGAG*WQGPGW
Trigger: CCAGCCAGGACCCTGCCAGCATCCAGCACCTGCAGC...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR GCA 90 bp AGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGTGGGCCGGCTGCAGGTaGTGGATGCTGGCAGGGTCC +
Preference number: 2 (lower is better)
Translates to: RDVGPCLSWVHRLLCPSWWAGCR*WMLAGS
Trigger: GGACCCTGCCAGCATCCAGCACCTGCAGCCGGCCCA...CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR CCA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCGGAGGTCATGGGGCCTaGGAGAGGGAATCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGGGHGA*ERESLG
Trigger: CCCCAGCGATTCCCTCTCCCAGGCCCCATGACCTCC...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGAGGTCATGGGGCCTaGGAGAGGGAATCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: APRLLSVSPVHTGSSCALGGHGA*ERESLG
Trigger: CCCCAGCGATTCCCTCTCCCAGGCCCCATGACCTCC...CAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTACCAGGACCTGGACTTaGCACGGGTTGCGAGGCTCC +
Preference number: 2 (lower is better)
Translates to: GQVLSSRPRDVGPCLSWVTRTWT*HGLRGS
Trigger: GGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT...AACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTGCCCCACCAGGACCTaGACTTGGCACGGGTTGCGA +
Preference number: 2 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTCPTRT*TWHGLR
Trigger: TCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCA...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTTGCCCCACCAGGACCTaGACTTGGCACGGGTTGCGA +
Preference number: 2 (lower is better)
Translates to: GQVLSSRPRDVGPCLSWVCPTRT*TWHGLR
Trigger: TCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCA...AACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATTCCTCCGCCCCTTCTTaGTTGGTAGCTCATCACCTG +
Preference number: 2 (lower is better)
Translates to: APRAASTGWGASEPSLSDSSAPS*LVAHHL
Trigger: CAGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGA...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CCA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCATGCTGGCAGGGTCCTaGCTGGGGACGTGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSMLAGS*LGTWRV
Trigger: CACCCTCCACGTCCCCAGCCAGGACCCTGCCAGCAT...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR CAA 90 bp CCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGACCCCCTCCTGTGCACCCCGAGCAGC +
Preference number: 2 (lower is better)
Translates to: PRSSDSPSYICHEQA*LLALHDPLLCTPSS
Trigger: GCTGCTCGGGGTGCACAGGAGGGGGTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGCGGTGGGTACATTGGTaGCAGAACAAGGCCACGCTG +
Preference number: 2 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKRWVHW*QNKATL
Trigger: CAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCG...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp TGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGCCGTAGACGCGGTACACTaGAGGCCAGGTTCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: WQCSGPQTPQGGCELPSAVDAVH*RPGSQQ
Trigger: CTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTAC...GGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTCTGCACAGGTGGCATaGGCGGCTGCTGGTAGGAGG +
Preference number: 2 (lower is better)
Translates to: HPRPFPESQGRRGTLKARSAQVA*AAAGRR
Trigger: CCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGA...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR TCA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGGGGACCGCCGCTGCTTaGGGGTACTTCTGCAGTCTC +
Preference number: 2 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGGTAAA*GYFCSL
Trigger: GAGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCC...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR GCA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCAGGAAGGGCCACGGTTaGTCGGCAGGCTCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSRKGHG*SAGSGP
Trigger: AGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCT...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGAAGGGCCACGGTTaGTCGGCAGGCTCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: GHPRPFPESQGRRGTLKARKGHG*SAGSGP
Trigger: AGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCT...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCAGTCCCTCCTACATCTaGCATGAACAGGCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: LCTPSSLHGLGRLRALPFSPSYI*HEQALL
Trigger: GAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACT...GAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACCCTGAGAAGTGTGGCTaGCAGAGTGGTGTAGCGGTC +
Preference number: 2 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDPEKCG*QSGVAV
Trigger: GACCGCTACACCACTCTGGCAGCCACACTTCTCAGG...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTTCGAGACAGAGGAGCTaGCCCACCAGGACCTGGACT +
Preference number: 2 (lower is better)
Translates to: GQVLSSRPRDVGPCLSWVSRQRS*PTRTWT
Trigger: AGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTCTCGA...AACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCGAGACAGAGGAGCTaGCCCACCAGGACCTGGACT +
Preference number: 2 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTSRQRS*PTRTWT
Trigger: AGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTCTCGA...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGAGCTCAGCTACTCCTaGCCCAAACAAGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDELSYS*PKQGQG
Trigger: ACCCTGCCCTTGTTTGGGGCAGGAGTAGCTGAGCTC...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATGAGGCCTGGGGATGTCTaGTCCAAGCTGTGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: APVLVNVGPREAGSPGPMRPGDV*SKLCSA
Trigger: AGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCT...CATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
3UTR-3UTR GCA 90 bp AGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGGGTGGTGGCCTGAGATaGCGGCGTGTGAAGCCCGGA +
Preference number: 2 (lower is better)
Translates to: RDVGPCLSWVHRLLCPSWGGGLR*RRVKPG
Trigger: TCCGGGCTTCACACGCCGGCATCTCAGGCCACCACC...CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTATGGGCCGGCTGCAGGTaGTGGATGCTGGCAGGGTCC +
Preference number: 2 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVWAGCR*WMLAGS
Trigger: GGACCCTGCCAGCATCCAGCACCTGCAGCCGGCCCA...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGGTGGCTCTGGCCATTaGTGGAGTCTGAGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDGGSGH*WSLSSG
Trigger: ACCAGAGCTCAGACTCCAGCAATGGCCAGAGCCACC...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGCCAGGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGCAGCCTCCACGGGTTaGGGCGCCTCAGAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: GQAGLRGMMLLGTNTGKLAASTG*GASEPS
Trigger: GGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGC...CAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp CCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCGCAGCCTCCACGGGTTaGGGCGCCTCAGAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: PPPSVPSKKTVSHEAATVAASTG*GASEPS
Trigger: GGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGC...GACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTTCCATAGGCCCAGGCTaGGGGTGCCCAAGTCATAGG +
Preference number: 2 (lower is better)
Translates to: GAGRSGPVGTLVTEQGHASIGPG*GCPSHR
Trigger: CCTATGACTTGGGCACCCCCAGCCTGGGCCTATGGA...AGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGGTGTGGCTGCCAGAGTaGTGTAGCGGTCCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: HPRPFPESQGRRGTLKARVWLPE*CSGPRA
Trigger: AGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCGTGTGGCTGCCAGAGTaGTGTAGCGGTCCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GHPRPFPESQGRRGTLKAVWLPE*CSGPRA
Trigger: AGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCTCAGACTCCTCAGGGTaGCTGCGAACTGCCCTCAGC +
Preference number: 2 (lower is better)
Translates to: ARFSAAGPGMWDHACPGFSDSSG*LRTALS
Trigger: GCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGA...GAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp TGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTGTGCCATGAAGGGGCTCTaGGTCACATGGCTCTGCACA +
Preference number: 2 (lower is better)
Translates to: WWPEMPACEARTHWRPQCAMKGL*VTWLCT
Trigger: TGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGC...ACACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR CCA 90 bp GGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCACCGTGGACCTTACTaGGGGAGAGGGCAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: GCEAPTGVRTTSQPRSSLHRGPY*GRGQVE
Trigger: CTCCACCTGCCCTCTCCCCCAGTAAGGTCCACGGTG...AAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR TCA 90 bp GGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCAGAGCCCTCCCTTTCTaGTGCATCAGAGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: GHADPGPLRAQQVTATQARALPF*CIRAEW
Trigger: CCACTCTGCTCTGATGCATCAGAAAGGGAGGGCTCT...GGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCACAGGCCTGTGTCCTaGGAAGTGTGGCTGCCAGAG +
Preference number: 2 (lower is better)
Translates to: GCEAPTGVRTTSQPRSSLHRPVS*EVWLPE
Trigger: CTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTG...AAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCCTGGCCTCAGAGGCATaGTGCTCTTGGGAACAAATA +
Preference number: 2 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPLASEA*CSWEQI
Trigger: TATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAG...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp AAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGAGGCCCCCAGGCTTCTaGGTGTTAGTCCTGTCCACA +
Preference number: 2 (lower is better)
Translates to: KARFSAAGPGMWDHACPGRPPGF*VLVLST
Trigger: TGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCT...CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp TCCTGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCACCTGAGAAGTGTGGCTaGCAGAGTGGTGTAGCGGTC +
Preference number: 2 (lower is better)
Translates to: SWQCSGPQTPQGGCELPSPEKCG*QSGVAV
Trigger: GACCGCTACACCACTCTGGCAGCCACACTTCTCAGG...TGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTAAGCCAGGAGAGCCCTaGCTGCCTTCCCTGTTAGCT +
Preference number: 2 (lower is better)
Translates to: GQVLSSRPRDVGPCLSWVKPGEP*LPSLLA
Trigger: AGCTAACAGGGAAGGCAGGCAGGGCTCTCCTGGCTT...AACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCCAGCTGCTCGGGCCTTaGTGCCTTGTGAGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGQLLGP*CLVSSA
Trigger: AGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTG...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp TTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATGGTCATGACCCTCCAAGCTGTGCAGTaGTGTCAGGGTGCTGACAGG +
Preference number: 2 (lower is better)
Translates to: LVNVGPREAGSPGPMVMTLQAVQ*CQGADR
Trigger: CCTGTCAGCACCCTGACAGCACTGCACAGCTTGGAG...GGTCATGACCATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
3UTR-3UTR GCA 90 bp AAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGGTCTGCTCCAAGCTGTaGAGTGCTGTCAGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: KARFSAAGPGMWDHACPGVCSKL*SAVRVL
Trigger: CAGCACCCTGACAGCACTGCACAGCTTGGAGCAGAC...CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR GCA 90 bp AGGTTGGTGGTGTCGGTGATGAGCATAGTCTGCGGGAGCAGGCCCGTGTGGGTGAGGCCTGGGGATGTCTaGTCCAAGCTGTGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: RLVVSVMSIVCGSRPVWVRPGDV*SKLCSA
Trigger: AGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCT...CACCCACACGGGCCTGCTCCCGCAGACTATGCTCATCACCGACACCACCAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR GCA 90 bp CCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAAGGCCTGGGGATGTCTaGTCCAAGCTGTGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: PMTRVEAPVLVNVGPREARPGDV*SKLCSA
Trigger: AGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCT...TGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
3UTR-3UTR GCA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCAGGCACACTCTGTGCCTaGGTGGAGGCCAGGCCGATG +
Preference number: 2 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSGTLCA*VEARPM
Trigger: CATCGGCCTGGCCTCCACGCAGGCACAGAGTGTGCC...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR GCA 90 bp GCCAGGCACCCCTTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCGACCGGCACACTCTGTaGCTGCGTGGAGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: ARHPFPLHPLTANLYHHLDRHTL*LRGGQA
Trigger: GGCCTGGCCTCCACGCAGGCACAGAGTGTGCCGGTC...GAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAAGGGGTGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR-3UTR GCA 90 bp GGTGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTACACCCCTCTCTGGATaGATTCCGCCCTATTGCACT +
Preference number: 2 (lower is better)
Translates to: GGGLRCRRVKPGLTGGLSTPLSG*IPPYCT
Trigger: AGTGCAATAGGGCGGAATGCATCCAGAGAGGGGTGT...ACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR GCA 90 bp GTGGCTGGGCTCCAGGCCCGTGGGGGACACTTGGTGGAGGGGTGTAGACACTGTTCCATGGCCAGCTTGTaGCGGAAGGCTTCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: VAGLQARGGHLVEGCRHCSMASL*RKASSL
Trigger: CAAAGAAGAAGCCTTCCGGCACAAGCTGGCCATGGA...ACAGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGTGTGGCTGCCAGAGTaGTGTAGCGGTCCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPVWLPE*CSGPRA
Trigger: AGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAATGTGGGTCACTAGCTaGAAGGAGTTGGGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTMWVTS*KELGQE
Trigger: TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACAT...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAATGTGGGTCACTAGCTaGAAGGAGTTGGGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: AAPPGPGLGTGCEAPTGVMWVTS*KELGQE
Trigger: TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACAT...TACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGCCCGTGGGGGACACTTaGTGGAGGGGTGTAGACACT +
Preference number: 2 (lower is better)
Translates to: HPRPFPESQGRRGTLKARPVGDT*WRGVDT
Trigger: AGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGG...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CCA 90 bp CATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGCTGGGCTCCAGGCCCGTaGGGGACACTTGGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: HPLTANLYHHLLLCGAQGWAPGP*GTLGGG
Trigger: CCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCA...GCCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR CCA 90 bp AGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCTGGGCTCCAGGCCCGTaGGGGACACTTGGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: SSDSPSYICHEQALLLALWAPGP*GTLGGG
Trigger: CCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCA...GAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGGTTCTGGGGCTGCTaGTTGAGGCCTGGGGATGTC +
Preference number: 2 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSRFWGC*LRPGDV
Trigger: GACATCCCCAGGCCTCAACCAGCAGCCCCAGAACCT...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CCA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCGAAGCCCGGACTCACTaGAGGCCTCAGTGTCTGAGG +
Preference number: 2 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSEARTH*RPQCLR
Trigger: CCTCAGACACTGAGGCCTCCAGTGAGTCCGGGCTTC...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCAGGTGCTGGATGCTaGCAGGGTCCTGGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVAGAGC*QGPGWG
Trigger: TCCCCAGCCAGGACCCTGCCAGCATCCAGCACCTGC...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR CCA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCGGCAGCAGGTGGCTCTaGCCATTGCTGGAGTCTGAG +
Preference number: 2 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSGSRWL*PLLESE
Trigger: CTCAGACTCCAGCAATGGCCAGAGCCACCTGCTGCC...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR TCA 90 bp GGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTAGAGCCCTCCCTTTCTaGTGCATCAGAGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: GAGRSGPVGTLVTEQGHARALPF*CIRAEW
Trigger: CCACTCTGCTCTGATGCATCAGAAAGGGAGGGCTCT...AGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp CCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTCTGGCCTCAGAGGCATaGTGCTCTTGGGAACAAATA +
Preference number: 2 (lower is better)
Translates to: PGPAQLLGPCCLVSSATPLASEA*CSWEQI
Trigger: TATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAG...AGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGGTAGACGCGGTACACTaGAGGCCAGGTTCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGVDAVH*RPGSQQ
Trigger: CTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTAC...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGGTAGACGCGGTACACTaGAGGCCAGGTTCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: HPRPFPESQGRRGTLKARVDAVH*RPGSQQ
Trigger: CTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTAC...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp CATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGCGGGGCCCCCAGCTGCTaGGACCAGCTTGGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: HPLTANLYHHLLLCGAQGGAPSC*DQLGFC
Trigger: ACAGAAGCCAAGCTGGTCTCAGCAGCTGGGGGCCCC...GCCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR GCA 90 bp CCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGCATAGTCCCTCCTACATCTaGCATGAACAGGCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: PEQPPRVGAPQSPPFLMHSPSYI*HEQALL
Trigger: GAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACT...ATGCATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAAGTCCCTCCTACATCTaGCATGAACAGGCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTSPSYI*HEQALL
Trigger: GAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACT...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCCCTGAGAAGTGTGGCTaGCAGAGTGGTGTAGCGGTC +
Preference number: 2 (lower is better)
Translates to: PESQGRRGTLKARFSAAGPEKCG*QSGVAV
Trigger: GACCGCTACACCACTCTGGCAGCCACACTTCTCAGG...GCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCAAGCCAGGAGAGCCCTaGCTGCCTTCCCTGTTAGCT +
Preference number: 2 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSKPGEP*LPSLLA
Trigger: AGCTAACAGGGAAGGCAGGCAGGGCTCTCCTGGCTT...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGAAGCCAGGAGAGCCCTaGCTGCCTTCCCTGTTAGCT +
Preference number: 2 (lower is better)
Translates to: APRLLSVSPVHTGSSCALKPGEP*LPSLLA
Trigger: AGCTAACAGGGAAGGCAGGCAGGGCTCTCCTGGCTT...CAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTTCGAGACAGAGGAGCTaGCCCACCAGGACCTGGACT +
Preference number: 2 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPSRQRS*PTRTWT
Trigger: AGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTCTCGA...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp AGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGAACAAGGGCAGGGTCTaGAGGGCGCTCGAGACAGAG +
Preference number: 2 (lower is better)
Translates to: RDVGPCLSWVHRLLCPSWNKGRV*RALETE
Trigger: CTCTGTCTCGAGCGCCCTGCAGACCCTGCCCTTGTT...CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAACAAGGGCAGGGTCTaGAGGGCGCTCGAGACAGAG +
Preference number: 2 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTNKGRV*RALETE
Trigger: CTCTGTCTCGAGCGCCCTGCAGACCCTGCCCTTGTT...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAAACAAGGGCAGGGTCTaGAGGGCGCTCGAGACAGAG +
Preference number: 2 (lower is better)
Translates to: GCGTMLVLGSQAPLSLLANKGRV*RALETE
Trigger: CTCTGTCTCGAGCGCCCTGCAGACCCTGCCCTTGTT...TGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCGAGCTCAGCTACTCCTaGCCCAAACAAGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: PESQGRRGTLKARFSAAGELSYS*PKQGQG
Trigger: ACCCTGCCCTTGTTTGGGGCAGGAGTAGCTGAGCTC...GCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCGAGCTCAGCTACTCCTaGCCCAAACAAGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: GHPRPFPESQGRRGTLKAELSYS*PKQGQG
Trigger: ACCCTGCCCTTGTTTGGGGCAGGAGTAGCTGAGCTC...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTGCTCGGGCCTTGCTaGCTTGTGAGCTCAGCTACT +
Preference number: 2 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSLLGPC*LVSSAT
Trigger: AGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAG...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCACAGCTGCTCGGGCCTTaGTGCCTTGTGAGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: GCGTMLVLGSQAPLSLLAQLLGP*CLVSSA
Trigger: AGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTG...TGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCAACTCCTCAGGGTGGCTaGGAACTGCCCTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSTPQGG*ELPSAS
Trigger: GCTGGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGT...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTGTCCCTCCTGGCAGTaGTCAGGACCTCAGACTCCT +
Preference number: 2 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGCPSWQ*SGPQTP
Trigger: AGGAGTCTGAGGTCCTGAGCACTGCCAGGAGGGACA...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCTGTCCCTCCTGGCAGTaGTCAGGACCTCAGACTCCT +
Preference number: 2 (lower is better)
Translates to: PESQGRRGTLKARFSAAGCPSWQ*SGPQTP
Trigger: AGGAGTCTGAGGTCCTGAGCACTGCCAGGAGGGACA...GCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCGGCTGGCTACAAGCTaGAGGGGGTGCCGGGTCACC +
Preference number: 2 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGRLATS*RGCRVT
Trigger: GGTGACCCGGCACCCCCTGCAGCTTGTAGCCAGCCG...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp TGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGGTGCTCCAAGCTGTGCAGTaGTGTCAGGGTGCTGACAGG +
Preference number: 2 (lower is better)
Translates to: CWLRPGDVCSKLCSAVRVLQAVQ*CQGADR
Trigger: CCTGTCAGCACCCTGACAGCACTGCACAGCTTGGAG...CACCCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
3UTR-3UTR GCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCCTAAGGGACCGCCGCTaGTTGAGGGTACTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: GHPRPFPESQGRRGTLKALRDRR*LRVLLQ
Trigger: CTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCTTAG...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR GCA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCTGAGGTGAAGACCTaGTTGGTGGGCGTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSSEVKT*LVGVRL
Trigger: CAGCCTCACGCCCACCAAGCAGGTCTTCACCTCAGA...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCAGGCCCAGGGATGTaGGACCATGCTTGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVAGPGM*DHACPG
Trigger: CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGC...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGGCCATGATGAGGTTCTaGGGCTGCTGGTTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGAMMRF*GCWLRP
Trigger: AGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGC...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CCA 90 bp CACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTATGGCTCTGCACAGGTaGCATGAGCGGCTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: HADPGPLRAQQVTATQACMALHR*HERLLV
Trigger: TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCAT...ACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR CCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTTGGAACAGGATCTGCTaGGATGCTGGGCCCCACTTG +
Preference number: 2 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSWNRIC*DAGPHL
Trigger: CAAGTGGGGCCCAGCATCCCAGCAGATCCTGTTCCA...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGCTGGAGTCTGAGCTCTaGTACAGCACCAGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: HPRPFPESQGRRGTLKARLESEL*YSTRLL
Trigger: CAGCAGCCTGGTGCTGTACCAGAGCTCAGACTCCAG...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR CCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGGTCTCGATGACGCTGTaGTTGGATGGCAGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: HPRPFPESQGRRGTLKARVSMTL*LDGSRW
Trigger: CCACCTGCTGCCATCCAACCACAGCGTCATCGAGAC...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR TCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGCCCTCCCTTTCTaGTGCATCAGAGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSRALPF*CIRAEW
Trigger: CCACTCTGCTCTGATGCATCAGAAAGGGAGGGCTCT...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp ACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACGCCTGTGTGAGTAGGTaGTGGGGTCAGTACAAATGG +
Preference number: 2 (lower is better)
Translates to: TRTWTWHGLRGSHRSKDDACVSR*WGQYKW
Trigger: CCATTTGTACTGACCCCATCACCTACTCACACAGGC...GTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGTGGGGGCTCTGCAGCTaGGCCATGGTGGCCATGAAG +
Preference number: 2 (lower is better)
Translates to: ASIDSQPLSSSPAVWGTGWGLCS*AMVAMK
Trigger: CTTCATGGCCACCATGGCTCAGCTGCAGAGCCCCCA...CCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR-3UTR GCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTCCTGAGAAGTGTGGCTaGCAGAGTGGTGTAGCGGTC +
Preference number: 2 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPPEKCG*QSGVAV
Trigger: GACCGCTACACCACTCTGGCAGCCACACTTCTCAGG...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GTGGAGATGAAGGTCTCGATGACGCTGTGGTTGGATGGCAGCAGGTGGCTCTGGCCTGAGAAGTGTGGCTaGCAGAGTGGTGTAGCGGTC +
Preference number: 2 (lower is better)
Translates to: VEMKVSMTLWLDGSRWLWPEKCG*QSGVAV
Trigger: GACCGCTACACCACTCTGGCAGCCACACTTCTCAGG...CCAGAGCCACCTGCTGCCATCCAACCACAGCGTCATCGAGACCTTCATCTCCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAAGCCAGGAGAGCCCTaGCTGCCTTCCCTGTTAGCT +
Preference number: 2 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTKPGEP*LPSLLA
Trigger: AGCTAACAGGGAAGGCAGGCAGGGCTCTCCTGGCTT...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTCTGCTCGGGCCTTGCTaGCTTGTGAGCTCAGCTACT +
Preference number: 2 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPLLGPC*LVSSAT
Trigger: AGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAG...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAACTCCTCAGGGTGGCTaGGAACTGCCCTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: GVSTNGMWVTSWKELGQETPQGG*ELPSAS
Trigger: GCTGGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGT...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAGGAGGCACACTCTGTGCCTaGGTGGAGGCCAGGCCGATG +
Preference number: 2 (lower is better)
Translates to: VSTNGMWVTSWKELGQEGGTLCA*VEARPM
Trigger: CATCGGCCTGGCCTCCACGCAGGCACAGAGTGTGCC...TCCTTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR GCA 90 bp TGCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGGACCGGCACACTCTGTaGCTGCGTGGAGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: CRHPQSRKHTCPRDTCRLDRHTL*LRGGQA
Trigger: GGCCTGGCCTCCACGCAGGCACAGAGTGTGCCGGTC...CAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR-3UTR GCA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTGCATTCCGCCCTATTaGACTCCTCCACTAGCGTCT +
Preference number: 2 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTCIPPY*TPPLAS
Trigger: AGACGCTAGTGGAGGAGTGCAATAGGGCGGAATGCA...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CCA 90 bp GAGCATAGTCTGCGGGAGCAGGCCCGTGTGGGTGTACTGGGCCACCTCGGGCTTAGTACAAATGGCATGTaGGTCACTAGCTGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: EHSLREQARVGVLGHLGLSTNGM*VTSWKE
Trigger: CTCCTTCCAGCTAGTGACCCACATGCCATTTGTACT...AAGCCCGAGGTGGCCCAGTACACCCACACGGGCCTGCTCCCGCAGACTATGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR CCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTGGAGGTCATGGGGCCTaGGAGAGGGAATCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGGGHGA*ERESLG
Trigger: CCCCAGCGATTCCCTCTCCCAGGCCCCATGACCTCC...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCGTAGCTCCTGTGCCCTaGGGTCACCTCTTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: GHPRPFPESQGRRGTLKAVAPVP*GHLFLL
Trigger: GAGAAGAAAGAGGTGACCCCAGGGCACAGGAGCTAC...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp TCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCTGGGCTCCAGGCCCGTaGGGGACACTTGGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: SITETHLSQRHMQTAMPAWAPGP*GTLGGG
Trigger: CCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCA...GGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR CCA 90 bp TGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGGTGCTGCTGAGACCAGCTTaGCTTCTGTACTCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: CWLRPGDVCSKLCSAVRVLLRPA*LLYSAG
Trigger: GCCTGCTGAGTACAGAAGCCAAGCTGGTCTCAGCAG...CACCCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
3UTR-3UTR CCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAGGGGACACCCCTCTCTaGATGCATTCCGCCCTATTG +
Preference number: 2 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTGDTPL*MHSALL
Trigger: CAATAGGGCGGAATGCATCCAGAGAGGGGTGTCCCC...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR CAA 90 bp TGGGAACACACTGGCCTGCAGACACCCTCAATCACGGAAACACACTaGTCCCAGAGACACATGCAGACTGCAATGCCTGCCAGGCACCCC +
Preference number: 2 (lower is better)
Translates to: WEHTGLQTPSITETH*SQRHMQTAMPARHP
Trigger: GGGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGCAGGCCAGTGTGTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR-3UTR TCA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTACATCTGCCATaGACAGGCTTTGCTCCTAGC +
Preference number: 2 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSLLHLP*TGFAPS
Trigger: GCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAG...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCCTCCTACATCTGCCATaGACAGGCTTTGCTCCTAGC +
Preference number: 2 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGLLHLP*TGFAPS
Trigger: GCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAG...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp CCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCGCCTGTGTGAGTAGGTaGTGGGGTCAGTACAAATGG +
Preference number: 2 (lower is better)
Translates to: PESQGRRGTLKARFSAAGACVSR*WGQYKW
Trigger: CCATTTGTACTGACCCCATCACCTACTCACACAGGC...GCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCCTGGCCTCAGAGGCATaGTGCTCTTGGGAACAAATA +
Preference number: 2 (lower is better)
Translates to: ARFSAAGPGMWDHACPGFLASEA*CSWEQI
Trigger: TATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAG...GAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAAGGCCCCCAGGCTTCTaGGTGTTAGTCCTGTCCACA +
Preference number: 2 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVRPPGF*VLVLST
Trigger: TGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCT...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp CCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGGGGCCCCCAGCTGCTaGGACCAGCTTGGCTTCTGT +
Preference number: 2 (lower is better)
Translates to: PSITETHLSQRHMQTAMPGAPSC*DQLGFC
Trigger: ACAGAAGCCAAGCTGGTCTCAGCAGCTGGGGGCCCC...AGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR GCA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAATCGAGACAGAGGAGCTaGCCCACCAGGACCTGGACT +
Preference number: 2 (lower is better)
Translates to: GVSTNGMWVTSWKELGQESRQRS*PTRTWT
Trigger: AGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTCTCGA...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTGGAAGGCTTCTTCTTTaGGCCGGTTGGCAAACCAGT +
Preference number: 2 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSGRLLL*AGWQTS
Trigger: ACTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCC...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CCA 90 bp GTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAGGAGTGTGGCTGCCAGAGTaGTGTAGCGGTCCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: VSTNGMWVTSWKELGQEGVWLPE*CSGPRA
Trigger: AGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC...TCCTTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGATGTGGGTCACTAGCTaGAAGGAGTTGGGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: APRLLSVSPVHTGSSCALMWVTS*KELGQE
Trigger: TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACAT...CAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTATGTGGGTCACTAGCTaGAAGGAGTTGGGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: GCEAPTGVRTTSQPRSSLMWVTS*KELGQE
Trigger: TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACAT...AAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACAGTACAAATGGCATGTaGGTCACTAGCTGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDSTNGM*VTSWKE
Trigger: CTCCTTCCAGCTAGTGACCCACATGCCATTTGTACT...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp AGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGTAGCTCCTGTGCCCTaGGGTCACCTCTTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: RFSAAGPGMWDHACPGFTVAPVP*GHLFLL
Trigger: GAGAAGAAAGAGGTGACCCCAGGGCACAGGAGCTAC...TGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp TGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATGCCACTCGCCCCGGCTaGCTACAAGCTGCAGGGGGT +
Preference number: 2 (lower is better)
Translates to: WPQRHDALGNKYRKAGGHATRPG*LQAAGG
Trigger: ACCCCCTGCAGCTTGTAGCCAGCCGGGGCGAGTGGC...ATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGATACGTGCATTCACATaGGAACACACTGGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: AMVAMKGLWVTWLCTGGMIRAFT*EHTGLQ
Trigger: CTGCAGGCCAGTGTGTTCCCATGTGAATGCACGTAT...CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR-3UTR CCA 90 bp GTTCTGGGGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCATACGTGCATTCACATaGGAACACACTGGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: VLGLLVEAWGCLLQAVQCIRAFT*EHTGLQ
Trigger: CTGCAGGCCAGTGTGTTCCCATGTGAATGCACGTAT...GCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR CCA 90 bp CATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGCAGGTTCTGGGGCTGCTaGTTGAGGCCTGGGGATGTC +
Preference number: 2 (lower is better)
Translates to: HPLTANLYHHLLLCGAQGRFWGC*LRPGDV
Trigger: GACATCCCCAGGCCTCAACCAGCAGCCCCAGAACCT...GCCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR TCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAAGAGCCCTCCCTTTCTaGTGCATCAGAGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVRALPF*CIRAEW
Trigger: CCACTCTGCTCTGATGCATCAGAAAGGGAGGGCTCT...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCACTCCTACATCTGCCATaGACAGGCTTTGCTCCTAGC +
Preference number: 2 (lower is better)
Translates to: GCGTMLVLGSQAPLSLLALLHLP*TGFAPS
Trigger: GCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAG...TGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp CCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGACTCCTACATCTGCCATaGACAGGCTTTGCTCCTAGC +
Preference number: 2 (lower is better)
Translates to: PVGTLVTEQGHADPGPLRLLHLP*TGFAPS
Trigger: GCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAG...TCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GTGGAGATGAAGGTCTCGATGACGCTGTGGTTGGATGGCAGCAGGTGGCTCTGGCTCCTACATCTGCCATaGACAGGCTTTGCTCCTAGC +
Preference number: 2 (lower is better)
Translates to: VEMKVSMTLWLDGSRWLWLLHLP*TGFAPS
Trigger: GCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAG...CCAGAGCCACCTGCTGCCATCCAACCACAGCGTCATCGAGACCTTCATCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR TCA 90 bp GTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAGGACACAGGCCTGTGTCCTaGGAAGTGTGGCTGCCAGAG +
Preference number: 2 (lower is better)
Translates to: VSTNGMWVTSWKELGQEGHRPVS*EVWLPE
Trigger: CTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTG...TCCTTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GGCCAGGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGCGGTGGGTACATTGGTaGCAGAACAAGGCCACGCTG +
Preference number: 2 (lower is better)
Translates to: GQAGLRGMMLLGTNTGKLRWVHW*QNKATL
Trigger: CAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCG...CAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAACGGTGGGTACATTGGTaGCAGAACAAGGCCACGCTG +
Preference number: 2 (lower is better)
Translates to: GVSTNGMWVTSWKELGQERWVHW*QNKATL
Trigger: CAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCG...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGCTGGCCTCAGAGGCATaGTGCTCTTGGGAACAAATA +
Preference number: 2 (lower is better)
Translates to: HPRPFPESQGRRGTLKARLASEA*CSWEQI
Trigger: TATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAG...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTCTGGCCTCAGAGGCATaGTGCTCTTGGGAACAAATA +
Preference number: 2 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSLASEA*CSWEQI
Trigger: TATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAG...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp TCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCTGGGGGCTCTGCAGCTaGGCCATGGTGGCCATGAAG +
Preference number: 2 (lower is better)
Translates to: SITETHLSQRHMQTAMPAWGLCS*AMVAMK
Trigger: CTTCATGGCCACCATGGCTCAGCTGCAGAGCCCCCA...GGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR-3UTR GCA 90 bp GTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAGGAAACAAGGGCAGGGTCTaGAGGGCGCTCGAGACAGAG +
Preference number: 2 (lower is better)
Translates to: VSTNGMWVTSWKELGQEGNKGRV*RALETE
Trigger: CTCTGTCTCGAGCGCCCTGCAGACCCTGCCCTTGTT...TCCTTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCAGCTGCTCGGGCCTTaGTGCCTTGTGAGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGQLLGP*CLVSSA
Trigger: AGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTG...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp AGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCTCCAAGCTGTGCAGTaGTGTCAGGGTGCTGACAGG +
Preference number: 2 (lower is better)
Translates to: SSDSPSYICHEQALLLALLQAVQ*CQGADR
Trigger: CCTGTCAGCACCCTGACAGCACTGCACAGCTTGGAG...GAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CCA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCAGTAGCTCCTGTGCCCTaGGGTCACCTCTTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSVAPVP*GHLFLL
Trigger: GAGAAGAAAGAGGTGACCCCAGGGCACAGGAGCTAC...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAGGATCAGACTCCTCAGGGTaGCTGCGAACTGCCCTCAGC +
Preference number: 2 (lower is better)
Translates to: VSTNGMWVTSWKELGQEGSDSSG*LRTALS
Trigger: GCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGA...TCCTTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCCCCGTGGGGGACACTTaGTGGAGGGGTGTAGACACT +
Preference number: 2 (lower is better)
Translates to: ADTLNHGNTLVPETHADCPVGDT*WRGVDT
Trigger: AGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGG...GCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR CCA 90 bp GCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCGGGCTCTGGGTCACATaGCTCTGCACAGGTGGCATG +
Preference number: 2 (lower is better)
Translates to: ADTLNHGNTLVPETHADCGLWVT*LCTGGM
Trigger: CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCC...GCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR-3UTR CCA 90 bp GCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGGCCATGAAGGGGCTCTaGGTCACATGGCTCTGCACA +
Preference number: 2 (lower is better)
Translates to: ASIDSQPLSSSPAVWGTGAMKGL*VTWLCT
Trigger: TGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGC...CCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR-3UTR TCA 90 bp GGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGGCCTGTGTGAGTAGGTaGTGGGGTCAGTACAAATGG +
Preference number: 2 (lower is better)
Translates to: GRPLQFQVRRLYPTKQRQACVSR*WGQYKW
Trigger: CCATTTGTACTGACCCCATCACCTACTCACACAGGC...CTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCCTGTGTGAGTAGGTaGTGGGGTCAGTACAAATGG +
Preference number: 2 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVACVSR*WGQYKW
Trigger: CCATTTGTACTGACCCCATCACCTACTCACACAGGC...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTCTGGCCTCAGAGGCATaGTGCTCTTGGGAACAAATA +
Preference number: 2 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPLASEA*CSWEQI
Trigger: TATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAG...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAACATGACCCCAGGAAGTaGGGCCATGATGAGGTTCTG +
Preference number: 2 (lower is better)
Translates to: GVSTNGMWVTSWKELGQEHDPRK*GHDEVL
Trigger: CAGAACCTCATCATGGCCTCACTTCCTGGGGTCATG...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR GCA 90 bp GGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATGCAGCTGCTCGGGCCTTaGTGCCTTGTGAGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: GLRGMMLLGTNTGKLEVMQLLGP*CLVSSA
Trigger: AGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTG...CATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGTACAAATGGCATGTaGGTCACTAGCTGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSSTNGM*VTSWKE
Trigger: CTCCTTCCAGCTAGTGACCCACATGCCATTTGTACT...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp TGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATACCAGGACCTGGACTTaGCACGGGTTGCGAGGCTCC +
Preference number: 2 (lower is better)
Translates to: WPQRHDALGNKYRKAGGHTRTWT*HGLRGS
Trigger: GGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT...ATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp CCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTCCCGTGGGGGACACTTaGTGGAGGGGTGTAGACACT +
Preference number: 2 (lower is better)
Translates to: PSITETHLSQRHMQTAMPPVGDT*WRGVDT
Trigger: AGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGG...AGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR CCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCTGGAGTCTGAGCTCTaGTACAGCACCAGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGLESEL*YSTRLL
Trigger: CAGCAGCCTGGTGCTGTACCAGAGCTCAGACTCCAG...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR TCA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACACTCCTACATCTGCCATaGACAGGCTTTGCTCCTAGC +
Preference number: 2 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATLLHLP*TGFAPS
Trigger: GCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAG...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp CCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCGCCTGTGTGAGTAGGTaGTGGGGTCAGTACAAATGG +
Preference number: 2 (lower is better)
Translates to: PPPSVPSKKTVSHEAATVACVSR*WGQYKW
Trigger: CCATTTGTACTGACCCCATCACCTACTCACACAGGC...GACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp ATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCAGGCATGACCCCAGGAAGTaGGGCCATGATGAGGTTCTG +
Preference number: 2 (lower is better)
Translates to: ITETHLSQRHMQTAMPARHDPRK*GHDEVL
Trigger: CAGAACCTCATCATGGCCTCACTTCCTGGGGTCATG...CCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR GCA 90 bp GGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATGAAGCCAGGAGAGCCCTaGCTGCCTTCCCTGTTAGCT +
Preference number: 2 (lower is better)
Translates to: GLRGMMLLGTNTGKLEVMKPGEP*LPSLLA
Trigger: AGCTAACAGGGAAGGCAGGCAGGGCTCTCCTGGCTT...CATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp CTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCGTCTGCTCCAAGCTGTaGAGTGCTGTCAGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: LNHGNTLVPETHADCNACVCSKL*SAVRVL
Trigger: CAGCACCCTGACAGCACTGCACAGCTTGGAGCAGAC...GCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR CCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTAGTACAAATGGCATGTaGGTCACTAGCTGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPSTNGM*VTSWKE
Trigger: CTCCTTCCAGCTAGTGACCCACATGCCATTTGTACT...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACATACGTGCATTCACATaGGAACACACTGGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHIRAFT*EHTGLQ
Trigger: CTGCAGGCCAGTGTGTTCCCATGTGAATGCACGTAT...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
3UTR-3UTR TCA 90 bp GGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATGAGAGCCCTCCCTTTCTaGTGCATCAGAGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: GLRGMMLLGTNTGKLEVMRALPF*CIRAEW
Trigger: CCACTCTGCTCTGATGCATCAGAAAGGGAGGGCTCT...CATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR TCA 90 bp GTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAGGACTCCTACATCTGCCATaGACAGGCTTTGCTCCTAGC +
Preference number: 2 (lower is better)
Translates to: VSTNGMWVTSWKELGQEGLLHLP*TGFAPS
Trigger: GCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAG...TCCTTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR GCA 90 bp TGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATTCTGAGGTGAAGACCTaGTTGGTGGGCGTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: WPQRHDALGNKYRKAGGHSEVKT*LVGVRL
Trigger: CAGCCTCACGCCCACCAAGCAGGTCTTCACCTCAGA...ATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTATGTGGGTCACTAGCTaGAAGGAGTTGGGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGMWVTS*KELGQE
Trigger: TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACAT...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTGGACCATGCTTGTCCTaGGTTCACAGGCTCCTTTGT +
Preference number: 2 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGGPCLS*VHRLLC
Trigger: ACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCC...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp ACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCAGGCACCCCTTTATACGTGCATTCACATaGGAACACACTGGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: THLSQRHMQTAMPARHPFIRAFT*EHTGLQ
Trigger: CTGCAGGCCAGTGTGTTCCCATGTGAATGCACGTAT...AAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR-3UTR CCA 90 bp TCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCCTGCTGAGACCAGCTTaGCTTCTGTACTCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: SITETHLSQRHMQTAMPALLRPA*LLYSAG
Trigger: GCCTGCTGAGTACAGAAGCCAAGCTGGTCTCAGCAG...GGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR CCA 90 bp ACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGGCCATGATGAGGTTCTaGGGCTGCTGGTTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: TPSITETHLSQRHMQTAMAMMRF*GCWLRP
Trigger: AGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGC...CATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR GCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTAGTCCCTCCTACATCTaGCATGAACAGGCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGSPSYI*HEQALL
Trigger: GAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACT...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CCA 90 bp GGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATGCTTCTTTGCGCCGGTTaGCAAACCAGTTGTAGACAC +
Preference number: 2 (lower is better)
Translates to: GLRGMMLLGTNTGKLEVMLLCAG*QTSCRH
Trigger: GTGTCTACAACTGGTTTGCCAACCGGCGCAAAGAAG...CATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR GCA 72 bp GACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTaGAGGTGCTGGATGCTGGCAGGGTCCTGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: DTVGLALSRWAG*RCWMLAGSWLG
Trigger: CCCCAGCCAGGACCCTGCCAGCATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR CAA 90 bp CCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCAGCAGCCTCCACGGGTaGGGGCGCCTCAGAGCCCTC +
Preference number: 3 (lower is better)
Translates to: PPVHPEQPPRVGAPQSPPSSLHG*GRLRAL
Trigger: GAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCT...GGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp GGAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATTGGACTTGGCACGGGTaGCGAGGCTCCCACAGGAGT +
Preference number: 3 (lower is better)
Translates to: GGHCGAGAEPVGRLQVLDWTWHG*RGSHRS
Trigger: ACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCA...ATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR-3UTR CAA 90 bp GCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGGCCCGTGGGGGACACTaGGTGGAGGGGTGTAGACAC +
Preference number: 3 (lower is better)
Translates to: AWPVPRPCSAARALLPCEARGGH*VEGCRH
Trigger: GTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGC...CTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CAA 90 bp CACCTCAGCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCGGCCCGGTGGGTACATaGGTGACAGAACAAGGCCAC +
Preference number: 3 (lower is better)
Translates to: HLSLASSPALLSCSGLAAGPVGT*VTEQGH
Trigger: GTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCC...GGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGCTGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp GCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTACACCAGGACCTGGACTaGGCACGGGTTGCGAGGCTC +
Preference number: 3 (lower is better)
Translates to: AAPPGPGLGTGCEAPTGVHQDLD*ARVARL
Trigger: GAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTG...TACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGTCAGCTGCTCGGGCCTaGCTGCCTTGTGAGCTCAGC +
Preference number: 3 (lower is better)
Translates to: RSCPTRTWTWHGLRGSHRSAARA*LPCELS
Trigger: GCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGA...CCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp GTGGCTGGGCTCCAGGCCCGTGGGGGACACTTGGTGGAGGGGTGTAGACACTGTGCCCGTGGGGGACACTaGGTGGAGGGGTGTAGACAC +
Preference number: 3 (lower is better)
Translates to: VAGLQARGGHLVEGCRHCARGGH*VEGCRH
Trigger: GTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGC...ACAGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
3UTR GCA 72 bp GCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGGGGGTaGCCAAGTCATAGGCCGCCCCCTTCAGTTCCAAGT +
Preference number: 3 (lower is better)
Translates to: AVPGLSIGPGWG*PSHRPPPSVPS
Trigger: ACTTGGAACTGAAGGGGGCGGCCTATGACTTGGGCACCCCCAGCCTGGGCCTATGGAGAGCCCTGGGACCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR GCA 72 bp GGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTaGTGCCTTGTGAGCTCAGCTACTCCTGCCCCAAAC +
Preference number: 3 (lower is better)
Translates to: GQFPGPAQLLGP*CLVSSATPAPN
Trigger: GTTTGGGGCAGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR CCA 72 bp ACCCCCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTaGGGCGCCTCAGAGCCCTCCCTTTCTGATGCATCA +
Preference number: 3 (lower is better)
Translates to: TPSCAPRAASTG*GASEPSLSDAS
Trigger: TGATGCATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAGGAGGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR CCA 72 bp GGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTaGGGGTGCCCAAGTCATAGGCCGCCCCCTTCAGTT +
Preference number: 3 (lower is better)
Translates to: GVAVPGLSIGPG*GCPSHRPPPSV
Trigger: AACTGAAGGGGGCGGCCTATGACTTGGGCACCCCCAGCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGAGCAGCCTCCACGGGTaGGGGCGCCTCAGAGCCCTC +
Preference number: 3 (lower is better)
Translates to: HPRPFPESQGRRGTLKARSSLHG*GRLRAL
Trigger: GAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCT...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCCTGCTGCCCATGCTGTaGATGACCGGCACACTCTGT +
Preference number: 3 (lower is better)
Translates to: LCTPSSLHGLGRLRALPFLLPML*MTGTLC
Trigger: ACAGAGTGTGCCGGTCATCAACAGCATGGGCAGCAG...GAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR CAA 90 bp ACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCCTGATGCTGGGCCCCACTaGAAACGGTTCCTCCGCCCC +
Preference number: 3 (lower is better)
Translates to: TSQPRSSLPSRGRRPGWPDAGPH*KRFLRP
Trigger: GGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATC...AGGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTGGGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR TCA 72 bp CTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTaGTGCATCAGAGCAGAGTGGGGAGCGAGGCACAGC +
Preference number: 3 (lower is better)
Translates to: LHGLGRLRALPF*CIRAEWGARHS
Trigger: GCTGTGCCTCGCTCCCCACTCTGCTCTGATGCATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp GAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGGTAGCCCGTGGGGGACACTaGGTGGAGGGGTGTAGACAC +
Preference number: 3 (lower is better)
Translates to: EGALGHMALHRWHERLLVARGGH*VEGCRH
Trigger: GTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGC...TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
3UTR-3UTR CAA 90 bp TGCAGTCTCACTGGTCGCAGGCTGTCCATAGCGCACACCGTGGACCTTACTGGGACCTCCGTGACGAGGTaGGAGCCCAGCCCCTGTGCC +
Preference number: 3 (lower is better)
Translates to: CSLTGRRLSIAHTVDLTGTSVTR*EPSPCA
Trigger: GGCACAGGGGCTGGGCTCCAACCTCGTCACGGAGGT...CCCAGTAAGGTCCACGGTGTGCGCTATGGACAGCCTGCGACCAGTGAGACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CAA 90 bp GCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGGACCGCCGCTGCTaGAGGGTACTTCTGCAGTCT +
Preference number: 3 (lower is better)
Translates to: AAPPGPGLGTGCEAPTGVRDRRC*RVLLQS
Trigger: AGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCT...TACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR GCA 72 bp CAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTaGCTTGTGAGCTCAGCTACTCCTGCCCCAAACAAG +
Preference number: 3 (lower is better)
Translates to: QFPGPAQLLGPC*LVSSATPAPNK
Trigger: CTTGTTTGGGGCAGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCTGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGAC +
Preference number: 3 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPCHEQA*LLALHD
Trigger: GTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCA...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp GGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCGGCCCGGTGGGTACATaGGTGACAGAACAAGGCCAC +
Preference number: 3 (lower is better)
Translates to: GHADPGPLRAQQVTATQAGPVGT*VTEQGH
Trigger: GTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCC...GGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp TCCTGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCATGGACTTGGCACGGGTaGCGAGGCTCCCACAGGAGT +
Preference number: 3 (lower is better)
Translates to: SWQCSGPQTPQGGCELPSWTWHG*RGSHRS
Trigger: ACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCA...TGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCCACCAGGACCTGGACTaGGCACGGGTTGCGAGGCTC +
Preference number: 3 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGHQDLD*ARVARL
Trigger: GAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTG...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCCACCAGGACCTGGACTaGGCACGGGTTGCGAGGCTC +
Preference number: 3 (lower is better)
Translates to: PESQGRRGTLKARFSAAGHQDLD*ARVARL
Trigger: GAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTG...GCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp GCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGCACCAGGACCTGGACTaGGCACGGGTTGCGAGGCTC +
Preference number: 3 (lower is better)
Translates to: APRLLSVSPVHTGSSCALHQDLD*ARVARL
Trigger: GAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTG...CAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp GGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTTTCTGGGGCTGCTGGTaGAGGCCTGGGGATGTCTGC +
Preference number: 3 (lower is better)
Translates to: GQVLSSRPRDVGPCLSWVFWGCW*RPGDVC
Trigger: GCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAA...AACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CAA 90 bp GGTGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTCGGAAGGCTTCTTCTTaGCGCCGGTTGGCAAACCAG +
Preference number: 3 (lower is better)
Translates to: GGGLRCRRVKPGLTGGLSRKASS*RRLANQ
Trigger: CTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCCG...ACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CAA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAAGCAGCCTCCACGGGTaGGGGCGCCTCAGAGCCCTC +
Preference number: 3 (lower is better)
Translates to: GVSTNGMWVTSWKELGQESSLHG*GRLRAL
Trigger: GAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCT...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTGGCCCGGTGGGTACATaGGTGACAGAACAAGGCCAC +
Preference number: 3 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTGPVGT*VTEQGH
Trigger: GTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCC...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTGGACTTGGCACGGGTaGCGAGGCTCCCACAGGAGT +
Preference number: 3 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSWTWHG*RGSHRS
Trigger: ACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCA...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCTGGACTTGGCACGGGTaGCGAGGCTCCCACAGGAGT +
Preference number: 3 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSWTWHG*RGSHRS
Trigger: ACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCA...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR GCA 72 bp CGCTGTGGTTGGATGGCAGCAGGTGGCTCTGGCCATTaGTGGAGTCTGAGCTCTGGTACAGCACCAGGCTGC +
Preference number: 3 (lower is better)
Translates to: RCGWMAAGGSGH*WSLSSGTAPGC
Trigger: GCAGCCTGGTGCTGTACCAGAGCTCAGACTCCAGCAATGGCCAGAGCCACCTGCTGCCATCCAACCACAGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000560968.5
ENST00000617366.4
3UTR CCA 72 bp AGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTaGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTGC +
Preference number: 3 (lower is better)
Translates to: SSRPRDVGPCLS*VHRLLCPSWQC
Trigger: GCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR CCA 72 bp GACCGCCGCTGCTTGAGGGTACTTCTGCAGTCTCACTaGTCGCAGGCTGTCCATAGCGCACACCGTGGACCT +
Preference number: 3 (lower is better)
Translates to: DRRCLRVLLQSH*SQAVHSAHRGP
Trigger: AGGTCCACGGTGTGCGCTATGGACAGCCTGCGACCAGTGAGACTGCAGAAGTACCCTCAAGCAGCGGCGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CAA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTAGCAGCCTCCACGGGTaGGGGCGCCTCAGAGCCCTC +
Preference number: 3 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGSSLHG*GRLRAL
Trigger: GAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCT...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTAGCAGCCTCCACGGGTaGGGGCGCCTCAGAGCCCTC +
Preference number: 3 (lower is better)
Translates to: PPSVPSKKTVSHEAATVPSSLHG*GRLRAL
Trigger: GAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCT...AGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp GGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTGGCCCGGTGGGTACATaGGTGACAGAACAAGGCCAC +
Preference number: 3 (lower is better)
Translates to: GCEAPTGVRTTSQPRSSLGPVGT*VTEQGH
Trigger: GTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCC...AAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp TCCTGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGATGTGGGACCATGCTaGTCCTGGGTTCACAGGCTC +
Preference number: 3 (lower is better)
Translates to: SWQCSGPQTPQGGCELPSDVGPC*SWVHRL
Trigger: GAGCCTGTGAACCCAGGACAAGCATGGTCCCACATC...TGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp GCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATGATGCATTCCGCCCTATaGCACTCCTCCACTAGCGTC +
Preference number: 3 (lower is better)
Translates to: APVLVNVGPREAGSPGPMMHSAL*HSSTSV
Trigger: GACGCTAGTGGAGGAGTGCAATAGGGCGGAATGCAT...CATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR GCA 72 bp TCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGTaGTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAA +
Preference number: 3 (lower is better)
Translates to: SWVHRLLCPSWQ*SGPQTPQGGCE
Trigger: TTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR GCA 72 bp CAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATaGTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: QVLSSRPRDVGP*LSWVHRLLCPS
Trigger: GGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR CCA 72 bp CCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTaGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGC +
Preference number: 3 (lower is better)
Translates to: PGSEAMMRFWGC*LRPGDVCSKLC
Trigger: GCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
3UTR CCA 72 bp ATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTaGGGCACAGGGCGCTCACCGTGGGGGCTCTGCAGC +
Preference number: 3 (lower is better)
Translates to: IDSQPLSSSPAV*GTGRSPWGLCS
Trigger: GCTGCAGAGCCCCCACGGTGAGCGCCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR-3UTR CAA 90 bp AGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGGGCCCGGTGGGTACATaGGTGACAGAACAAGGCCAC +
Preference number: 3 (lower is better)
Translates to: RDVGPCLSWVHRLLCPSWGPVGT*VTEQGH
Trigger: GTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCC...CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCCCGGTGGGTACATaGGTGACAGAACAAGGCCAC +
Preference number: 3 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPGPVGT*VTEQGH
Trigger: GTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCC...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCGATGTGGGACCATGCTaGTCCTGGGTTCACAGGCTC +
Preference number: 3 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSDVGPC*SWVHRL
Trigger: GAGCCTGTGAACCCAGGACAAGCATGGTCCCACATC...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCGATGTGGGACCATGCTaGTCCTGGGTTCACAGGCTC +
Preference number: 3 (lower is better)
Translates to: GHPRPFPESQGRRGTLKADVGPC*SWVHRL
Trigger: GAGCCTGTGAACCCAGGACAAGCATGGTCCCACATC...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCCTGCTGCCCATGCTGTaGATGACCGGCACACTCTGT +
Preference number: 3 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSLLPML*MTGTLC
Trigger: ACAGAGTGTGCCGGTCATCAACAGCATGGGCAGCAG...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
3UTR-3UTR CAA 90 bp CCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCTCCGCCCCTTCTTGGTaGGTAGCTCATCACCTGTGG +
Preference number: 3 (lower is better)
Translates to: PESQGRRGTLKARFSAAGSAPSW*VAHHLW
Trigger: CCACAGGTGATGAGCTACCAACCAAGAAGGGGCGGA...GCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR TCA 72 bp CCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATaGACAGGCTTTGCTCCTAGCTCTCCACGACCCCCT +
Preference number: 3 (lower is better)
Translates to: PTKQRQSLLHLP*TGFAPSSPRPP
Trigger: AGGGGGTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR TCA 72 bp GGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTaGAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGT +
Preference number: 3 (lower is better)
Translates to: GLFLNPRVDAVH*RPGSQQQAQGC
Trigger: ACATCCCTGGGCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR TCA 72 bp CCTGGAACAGGATCTGCTGGGATGCTGGGCCCCACTTaGAACGGTTCCTCCGCCCCTTCTTGGTTGGTAGCT +
Preference number: 3 (lower is better)
Translates to: PGTGSAGMLGPT*NGSSAPSWLVA
Trigger: AGCTACCAACCAAGAAGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATCCCAGCAGATCCTGTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR GCA 72 bp CACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTaGCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATA +
Preference number: 3 (lower is better)
Translates to: HSYTGLCPEKCG*QSGVAVPGLSI
Trigger: TATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCTGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGAC +
Preference number: 3 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSCHEQA*LLALHD
Trigger: GTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCA...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGAC +
Preference number: 3 (lower is better)
Translates to: HPRPFPESQGRRGTLKARCHEQA*LLALHD
Trigger: GTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCA...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGAC +
Preference number: 3 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGCHEQA*LLALHD
Trigger: GTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCA...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAATCAGCTGCTCGGGCCTaGCTGCCTTGTGAGCTCAGC +
Preference number: 3 (lower is better)
Translates to: GVSTNGMWVTSWKELGQESAARA*LPCELS
Trigger: GCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGA...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGATGTGGGACCATGCTaGTCCTGGGTTCACAGGCTC +
Preference number: 3 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPDVGPC*SWVHRL
Trigger: GAGCCTGTGAACCCAGGACAAGCATGGTCCCACATC...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCTTCCTCCGCCCCTTCTaGGTTGGTAGCTCATCACCT +
Preference number: 3 (lower is better)
Translates to: PESQGRRGTLKARFSAAGFLRPF*VGSSSP
Trigger: AGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGAA...GCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CAA 90 bp AGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGGTCTCTCGCTCCTCCTaGCTAGGGTTCTTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: RDVGPCLSWVHRLLCPSWVSRSS*LGFFCL
Trigger: GAGGCAGAAGAACCCTAGCAAGGAGGAGCGAGAGAC...CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
3UTR-3UTR CAA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTTGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGAC +
Preference number: 3 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPCHEQA*LLALHD
Trigger: GTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCA...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CACCCCTTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTTCTGGGGCTGCTGGTaGAGGCCTGGGGATGTCTGC +
Preference number: 3 (lower is better)
Translates to: HPFPLHPLTANLYHHLLLFWGCW*RPGDVC
Trigger: GCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAA...CAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR-3UTR CAA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCATGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGAC +
Preference number: 3 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSCHEQA*LLALHD
Trigger: GTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCA...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp TGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGGGCCCGGTGGGTACATaGGTGACAGAACAAGGCCAC +
Preference number: 3 (lower is better)
Translates to: CIPRSSDSPSYICHEQALGPVGT*VTEQGH
Trigger: GTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCC...CAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCTTCTGGGGCTGCTGGTaGAGGCCTGGGGATGTCTGC +
Preference number: 3 (lower is better)
Translates to: LNHGNTLVPETHADCNACFWGCW*RPGDVC
Trigger: GCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAA...GCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
3UTR GCA 72 bp ACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTaGCAGGCACCCCTTTCCCCTGCATCCATTGACAGC +
Preference number: 3 (lower is better)
Translates to: TLVPETHADCNA*QAPLSPASIDS
Trigger: GCTGTCAATGGATGCAGGGGAAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
3UTR CCA 72 bp CGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTaGCCTCAGAGGCATGATGCTCTTGGGAACAAATAC +
Preference number: 3 (lower is better)
Translates to: RSSLPSRGRRPG*PQRHDALGNKY
Trigger: GTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR GCA 72 bp TGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTaGCATGAACAGGCTTTGCTCCTAGCTCTCCACGAC +
Preference number: 3 (lower is better)
Translates to: CIPRSSDSPSYI*HEQALLLALHD
Trigger: GTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR-3UTR CAA 90 bp CCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTTGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGAC +
Preference number: 3 (lower is better)
Translates to: PPSVPSKKTVSHEAATVPCHEQA*LLALHD
Trigger: GTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCA...AGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
CDS-3UTR TCA 90 bp GGCTGGGGACGTGGAGGGTGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTAGGCCAGGGGAGCTGTaGGCGGGCAGCGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GWGRGGWWPEMPACEARTRPGEL*AGSAGP
Trigger: GGGACCTGCGCTGCCCGCTCACAGCTCCCCTGGCCT...AGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCACCCTCCACGTCCCCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CCA 90 bp GGAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATGCAGCCTCCACGGGTTaGGGCGCCTCAGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GGHCGAGAEPVGRLQVLDAASTG*GASEPS
Trigger: GGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGC...ATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp CCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCAGGGCGGCCCGCTTCTaGGTCTTCATGGGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PPVHPEQPPRVGAPQSPPRAARF*VFMGVP
Trigger: GGGCACTCCCATGAAGACGCAGAAGCGGGCCGCCCT...GGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATCCAGTTCCCCGGCCCTaGTCAGCTGCTCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GGHCGAGAEPVGRLQVLDPVPRP*SAARAL
Trigger: CAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGG...ATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp CCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTCCACCACGGCTTTCTaGTGGGCCGCCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PPVHPEQPPRVGAPQSPPSTTAF*WAASSG
Trigger: CCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGTGGA...GGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATGTGGCAGGGTCCTGGCTaGGGACGTGGAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: EDTVGLALSRWAGCRCWMWQGPG*GRGGWW
Trigger: CCACCACCCTCCACGTCCCCAGCCAGGACCCTGCCA...CATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR TCA 90 bp GAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATGGGGGCCCCCAGCTGCTaGGACCAGCTTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: EDTVGLALSRWAGCRCWMGAPSC*DQLGFC
Trigger: ACAGAAGCCAAGCTGGTCTCAGCAGCTGGGGGCCCC...CATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp TGTGTGGGGCACAGGGCGCTCACCGTGGGGGCTCTGCAGCTGAGCCATGGTGGCCGCGTGGGTTGCGTTTaGCTGCCGGCCGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: CVGHRALTVGALQLSHGGRVGCV*LPAGRH
Trigger: GTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCG...GCCACCATGGCTCAGCTGCAGAGCCCCCACGGTGAGCGCCCTGTGCCCCACACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp GAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATGGGCACACTCTGTGCCTaGGTGGAGGCCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: EDTVGLALSRWAGCRCWMGTLCA*VEARPM
Trigger: CATCGGCCTGGCCTCCACGCAGGCACAGAGTGTGCC...CATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp GGCTGGGGACGTGGAGGGTGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTTGGGCCGGCTGCAGGTaGTGGATGCTGGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GWGRGGWWPEMPACEARTWAGCR*WMLAGS
Trigger: GGACCCTGCCAGCATCCAGCACCTGCAGCCGGCCCA...AGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCACCCTCCACGTCCCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp GGCTGGGGACGTGGAGGGTGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTCGGCTGGCTACAAGCTaGAGGGGGTGCCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: GWGRGGWWPEMPACEARTRLATS*RGCRVT
Trigger: GGTGACCCGGCACCCCCTGCAGCTTGTAGCCAGCCG...AGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCACCCTCCACGTCCCCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGCAGCCTCCACGGGTTaGGGCGCCTCAGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: APRAASTGWGASEPSLSDAASTG*GASEPS
Trigger: GGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGC...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp AAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCGGCCCCAGCGGCCCGTaGATCAGGGCCCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: KCGCQSGVAVPGLSIGPGGPSGP*IRAPAC
Trigger: ACAGGCAGGGGCCCTGATTCACGGGCCGCTGGGGCC...GCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257555.11
CDS-3UTR TCA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGAGGCCAGGGGAGCTGTaGGCGGGCAGCGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKRPGEL*AGSAGP
Trigger: GGGACCTGCGCTGCCCGCTCACAGCTCCCCTGGCCT...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR TCA 90 bp GGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATGCTTGGGGGCTCTGCAGCTaGGCCATGGTGGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: GHCGAGAEPVGRLQVLDAWGLCS*AMVAMK
Trigger: CTTCATGGCCACCATGGCTCAGCTGCAGAGCCCCCA...AGCATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCCCGGCCCTGCTCAGCTaGTCGGGCCTTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPPALLS*SGLAAL
Trigger: CAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGG...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGCAGCCTCCACGGGTTaGGGCGCCTCAGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTAASTG*GASEPS
Trigger: GGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGC...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CAGCTGTCCAGGAAGGGCCACGGTTGCTCGGCAGGCTCAGGTCCTCCAGGCAGGGCCACTCGCCCCGGCTaGCTACAAGCTGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: QLSRKGHGCSAGSGPPGRATRPG*LQAAGG
Trigger: ACCCCCTGCAGCTTGTAGCCAGCCGGGGCGAGTGGC...CCTGCCTGGAGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCTGGACAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGCATAAACCATGGCTCGGCTaGCACAGGGCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PEQPPRVGAPQSPPFLMHKPWLG*HRATRP
Trigger: GGGCCGCGTGGCCCTGTGGCAGCCGAGCCATGGTTT...ATGCATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257555.11
ENST00000560968.5
CDS-3UTR GCA 90 bp GGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATGCTCCCCGGCTCACCCAGTaGCTGGATCAGTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GHCGAGAEPVGRLQVLDAPRLTQ*LDQCLF
Trigger: AAAGAGGCACTGATCCAGGCACTGGGTGAGCCGGGG...AGCATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp CCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCGTCTGCTCCAAGCTGTaGAGTGCTGTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PPVHPEQPPRVGAPQSPPVCSKL*SAVRVL
Trigger: CAGCACCCTGACAGCACTGCACAGCTTGGAGCAGAC...GGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTCTGAGGTGAAGACCTaGTTGGTGGGCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PPVHPEQPPRVGAPQSPPSEVKT*LVGVRL
Trigger: CAGCCTCACGCCCACCAAGCAGGTCTTCACCTCAGA...GGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGCTGCAGGTGCTGGATaGTGGCAGGGTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: APRAASTGWGASEPSLSDAAGAG*WQGPGW
Trigger: CCAGCCAGGACCCTGCCAGCATCCAGCACCTGCAGC...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTTGGGCCGGCTGCAGGTaGTGGATGCTGGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: PGPAQLLGPCCLVSSATPWAGCR*WMLAGS
Trigger: GGACCCTGCCAGCATCCAGCACCTGCAGCCGGCCCA...AGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTATGGGCCGGCTGCAGGTaGTGGATGCTGGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: AAPPGPGLGTGCEAPTGVWAGCR*WMLAGS
Trigger: GGACCCTGCCAGCATCCAGCACCTGCAGCCGGCCCA...TACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCGAGCTCAGCTACTCCTaGCCCAAACAAGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PPVHPEQPPRVGAPQSPPELSYS*PKQGQG
Trigger: ACCCTGCCCTTGTTTGGGGCAGGAGTAGCTGAGCTC...GGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATGCAGCTGCTCGGGCCTTaGTGCCTTGTGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: EDTVGLALSRWAGCRCWMQLLGP*CLVSSA
Trigger: AGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTG...CATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACACCAGTTCCCCGGCCCTaGTCAGCTGCTCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTPVPRP*SAARAL
Trigger: CAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGG...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GCCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCGCCTCCCCCACCGCGTaGGTTGCGTTTGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: ADDQGGGTCVGERRTQGGASPTA*VAFACR
Trigger: CCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGC...GCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCGCCATGATGAGGTTCTaGGGCTGCTGGTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPVHPEQPPRVGAPQSPPAMMRF*GCWLRP
Trigger: AGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGC...GGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGGCCGGCTGCAGGTGCTaGATGCTGGCAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VWLPEWCSGPRALHRPRLAGCRC*MLAGSW
Trigger: CCAGGACCCTGCCAGCATCCAGCACCTGCAGCCGGC...CAGCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GAGCATAGTCTGCGGGAGCAGGCCCGTGTGGGTGTACTGGGCCACCTCGGGCTTGCCGGCTGCAGGTGCTaGATGCTGGCAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EHSLREQARVGVLGHLGLAGCRC*MLAGSW
Trigger: CCAGGACCCTGCCAGCATCCAGCACCTGCAGCCGGC...AAGCCCGAGGTGGCCCAGTACACCCACACGGGCCTGCTCCCGCAGACTATGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp GGCTGGGGACGTGGAGGGTGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTGACGCTGTGGTTGGATaGCAGCAGGTGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GWGRGGWWPEMPACEARTDAVVG*QQVALA
Trigger: GGCCAGAGCCACCTGCTGCCATCCAACCACAGCGTC...AGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCACCCTCCACGTCCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp GCCCGTGTGGGTGTACTGGGCCACCTCGGGCTTGTGGCTGTAGAGGGCGTGGGGGACGCTGTGGTTGGATaGCAGCAGGTGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ARVGVLGHLGLVAVEGVGDAVVG*QQVALA
Trigger: GGCCAGAGCCACCTGCTGCCATCCAACCACAGCGTC...CCCCACGCCCTCTACAGCCACAAGCCCGAGGTGGCCCAGTACACCCACACGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp CACCTCAGCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCGTGTGGCTGCCAGAGTaGTGTAGCGGTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HLSLASSPALLSCSGLAAVWLPE*CSGPRA
Trigger: AGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC...GGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGCTGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGATGCTGGGCCCCACTTaGAACGGTTCCTCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: AWPVPRPCSAARALLPCEMLGPT*NGSSAP
Trigger: AGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCAT...CTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCATGCTGGGCCCCACTTaGAACGGTTCCTCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPMLGPT*NGSSAP
Trigger: AGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCAT...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCAGGCCAGGGGAGCTGTaGGCGGGCAGCGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGRPGEL*AGSAGP
Trigger: GGGACCTGCGCTGCCCGCTCACAGCTCCCCTGGCCT...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR TCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATTGGGGGCTCTGCAGCTaGGCCATGGTGGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: APRAASTGWGASEPSLSDWGLCS*AMVAMK
Trigger: CTTCATGGCCACCATGGCTCAGCTGCAGAGCCCCCA...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCCCTCAGTGTCTGAGGTaGAGACCTGCTTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LCTPSSLHGLGRLRALPFPQCLR*RPAWWA
Trigger: CGCCCACCAAGCAGGTCTTCACCTCAGACACTGAGG...GAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp TGTGTGGGGCACAGGGCGCTCACCGTGGGGGCTCTGCAGCTGAGCCATGGTGGCTGGGTTGCGTTTGCCTaGCGGCCGGCAGACACAAAC +
Preference number: 4 (lower is better)
Translates to: CVGHRALTVGALQLSHGGWVAFA*RPADTN
Trigger: GTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCA...GCCACCATGGCTCAGCTGCAGAGCCCCCACGGTGAGCGCCCTGTGCCCCACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGAAACCATGGCTCGGCTaGCACAGGGCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKKPWLG*HRATRP
Trigger: GGGCCGCGTGGCCCTGTGGCAGCCGAGCCATGGTTT...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257555.11
ENST00000560968.5
CDS-3UTR GCA 90 bp GTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCAAACCATGGCTCGGCTaGCACAGGGCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: VAMKGLWVTWLCTGGMSGKPWLG*HRATRP
Trigger: GGGCCGCGTGGCCCTGTGGCAGCCGAGCCATGGTTT...GCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAAACCATGGCTCGGCTaGCACAGGGCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: ADDQGGGTCVGERRTQGGKPWLG*HRATRP
Trigger: GGGCCGCGTGGCCCTGTGGCAGCCGAGCCATGGTTT...GCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCGGATCAGTGCCTCTTTaGTCAGCCCTGACTCGAGCA +
Preference number: 4 (lower is better)
Translates to: PPVHPEQPPRVGAPQSPPGSVPL*SALTRA
Trigger: TGCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCC...GGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATTGCGCCACCTCTCGCTaGTTGCGGACGTACCAGGTG +
Preference number: 4 (lower is better)
Translates to: APRAASTGWGASEPSLSDCATSR*LRTYQV
Trigger: CACCTGGTACGTCCGCAAGCAGCGAGAGGTGGCGCA...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGGCCTGGAACAGGATCTaGTGGGATGCTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: AWPVPRPCSAARALLPCEAWNRI*WDAGPH
Trigger: GTGGGGCCCAGCATCCCAGCAGATCCTGTTCCAGGC...CTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATAGGCCTGGGGATGTCTaGTCCAAGCTGTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GGHCGAGAEPVGRLQVLDRPGDV*SKLCSA
Trigger: AGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCT...ATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp GGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGGACCGGCACACTCTGTaGCTGCGTGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GHEGALGHMALHRWHERLDRHTL*LRGGQA
Trigger: GGCCTGGCCTCCACGCAGGCACAGAGTGTGCCGGTC...CAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTGTGACCGGCACACTCTGTaGCTGCGTGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WWPEMPACEARTHWRPQCDRHTL*LRGGQA
Trigger: GGCCTGGCCTCCACGCAGGCACAGAGTGTGCCGGTC...ACACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp ACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCCTGACCGGCACACTCTGTaGCTGCGTGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TSQPRSSLPSRGRRPGWPDRHTL*LRGGQA
Trigger: GGCCTGGCCTCCACGCAGGCACAGAGTGTGCCGGTC...AGGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTGGGAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGGACCGGCACACTCTGTaGCTGCGTGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKDRHTL*LRGGQA
Trigger: GGCCTGGCCTCCACGCAGGCACAGAGTGTGCCGGTC...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCCGGCTGGCTACAAGCTaGAGGGGGTGCCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: KCGCQSGVAVPGLSIGPGRLATS*RGCRVT
Trigger: GGTGACCCGGCACCCCCTGCAGCTTGTAGCCAGCCG...GCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTCCTCCCTGCCCTGCATaGGTGAACTGCTGCGCCACC +
Preference number: 4 (lower is better)
Translates to: PGPAQLLGPCCLVSSATPPPCPA*VNCCAT
Trigger: GGTGGCGCAGCAGTTCACCCATGCAGGGCAGGGAGG...AGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTACCCGTGTGGGTGTACTaGGCCACCTCGGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: AAPPGPGLGTGCEAPTGVPVWVY*ATSGLW
Trigger: CCACAAGCCCGAGGTGGCCCAGTACACCCACACGGG...TACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGGGGAGCAGGCCCGTGTaGGTGTACTGGGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKGSRPV*VYWATS
Trigger: CGAGGTGGCCCAGTACACCCACACGGGCCTGCTCCC...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGGTAGGAGGGGTGCAGCGGGGACGTGGAGGGTGGTaGCCTGAGATGCCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: HMALHRWHERLLVGGVQRGRGGW*PEMPAC
Trigger: ACACGCCGGCATCTCAGGCCACCACCCTCCACGTCC...CCGCTGCACCCCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp TGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGCCTGGGGACGTGGAGGGTaGTGGCCTGAGATGCCGGCG +
Preference number: 4 (lower is better)
Translates to: WQCSGPQTPQGGCELPSAWGRGG*WPEMPA
Trigger: CGCCGGCATCTCAGGCCACCACCCTCCACGTCCCCA...GGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGCTGGGGACGTGGAGGGTGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTGGCAGCAGGTGGCTCTaGCCATTGCTGGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GWGRGGWWPEMPACEARTGSRWL*PLLESE
Trigger: CTCAGACTCCAGCAATGGCCAGAGCCACCTGCTGCC...AGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCACCCTCCACGTCCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp GGTGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTGGAGGTCATGGGGCCTaGGAGAGGGAATCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGGLRCRRVKPGLTGGLSGGHGA*ERESLG
Trigger: CCCCAGCGATTCCCTCTCCCAGGCCCCATGACCTCC...ACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp GCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGTGCCCCACCAGGACCTaGACTTGGCACGGGTTGCGA +
Preference number: 4 (lower is better)
Translates to: AWPVPRPCSAARALLPCECPTRT*TWHGLR
Trigger: TCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCA...CTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CAGCTGTCCAGGAAGGGCCACGGTTGCTCGGCAGGCTCAGGTCCTCCAGGCAGGGCAGGCCCAGGGATGTaGGACCATGCTTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLSRKGHGCSAGSGPPGRAGPGM*DHACPG
Trigger: CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGC...CCTGCCTGGAGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCTGGACAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp ACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCCTGCCACTCGCCCCGGCTaGCTACAAGCTGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: TSQPRSSLPSRGRRPGWPATRPG*LQAAGG
Trigger: ACCCCCTGCAGCTTGTAGCCAGCCGGGGCGAGTGGC...AGGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTGGGAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGCTGCAGGTAGGACTTaGCCATCTTCGCCACACGCC +
Preference number: 4 (lower is better)
Translates to: APRAASTGWGASEPSLSDAAGRT*PSSPHA
Trigger: GGCGTGTGGCGAAGATGGTCAAGTCCTACCTGCAGC...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp TGTGTGGGGCACAGGGCGCTCACCGTGGGGGCTCTGCAGCTGAGCCATGGTGGCACAGGTGGGACTGGTTaGGGCCAGTGGTATCGACCA +
Preference number: 4 (lower is better)
Translates to: CVGHRALTVGALQLSHGGTGGTG*GQWYRP
Trigger: TGGTCGATACCACTGGCCTCAACCAGTCCCACCTGT...GCCACCATGGCTCAGCTGCAGAGCCCCCACGGTGAGCGCCCTGTGCCCCACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR TCA 90 bp GTCATGACCCCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGAGGAGGCCAGGGGAGCTGTaGGCGGGCAGCGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: VMTPGSEAMMRFWGCWLRRPGEL*AGSAGP
Trigger: GGGACCTGCGCTGCCCGCTCACAGCTCCCCTGGCCT...CCTCAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGGGGTCATGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000540108.1
CDS-3UTR TCA 90 bp TGGCTGGGCTCCAGGCCCGTGGGGGACACTTGGTGGAGGGGTGTAGACACTGTCTGGGGGCTCTGCAGCTaGGCCATGGTGGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: WLGSRPVGDTWWRGVDTVWGLCS*AMVAMK
Trigger: CTTCATGGCCACCATGGCTCAGCTGCAGAGCCCCCA...GACAGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR TCA 90 bp CACCTCAGCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCCGGTGGGTACATTGGTaGCAGAACAAGGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: HLSLASSPALLSCSGLAARWVHW*QNKATL
Trigger: CAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCG...GGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGCTGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCCCTCAGTGTCTGAGGTaGAGACCTGGGGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPPQCLR*RPGGAE
Trigger: CTCTGCTCCCCCAGGTCTTCACCTCAGACACTGAGG...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000541395.5
CDS-3UTR GCA 90 bp GAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGGTACGCGTGGGTTGCGTTTaGCTGCCGGCCGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: EGALGHMALHRWHERLLVRVGCV*LPAGRH
Trigger: GTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCG...TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TCCTGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCACGCGTGGGTTGCGTTTaGCTGCCGGCCGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SWQCSGPQTPQGGCELPSRVGCV*LPAGRH
Trigger: GTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCG...TGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257555.11
ENST00000560968.5
CDS-3UTR GCA 90 bp GCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAAACCATGGCTCGGCTaGCACAGGGCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: AMVAMKGLWVTWLCTGGMKPWLG*HRATRP
Trigger: GGGCCGCGTGGCCCTGTGGCAGCCGAGCCATGGTTT...CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAGGGCGGCCCGCTTCTaGGTCTTCATGGGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: ADDQGGGTCVGERRTQGGRAARF*VFMGVP
Trigger: GGGCACTCCCATGAAGACGCAGAAGCGGGCCGCCCT...GCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCTCCTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTCCATGGCCAGCTTGTaGCGGAAGGCTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: PPVHPEQPPRVGAPQSPPSMASL*RKASSL
Trigger: CAAAGAAGAAGCCTTCCGGCACAAGCTGGCCATGGA...GGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR GCA 90 bp CACCTCAGCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCGTCTGCTCCAAGCTGTaGAGTGCTGTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HLSLASSPALLSCSGLAAVCSKL*SAVRVL
Trigger: CAGCACCCTGACAGCACTGCACAGCTTGGAGCAGAC...GGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGCTGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCGCTGCAGGTGCTGGATaGTGGCAGGGTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KCGCQSGVAVPGLSIGPGAAGAG*WQGPGW
Trigger: CCAGCCAGGACCCTGCCAGCATCCAGCACCTGCAGC...GCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GAGCATAGTCTGCGGGAGCAGGCCCGTGTGGGTGTACTGGGCCACCTCGGGCTTGGTACAGCACCAGGCTaGTGGAGGACACTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: EHSLREQARVGVLGHLGLGTAPG*WRTLWG
Trigger: GCCCCACAGTGTCCTCCAGCAGCCTGGTGCTGTACC...AAGCCCGAGGTGGCCCAGTACACCCACACGGGCCTGCTCCCGCAGACTATGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp CCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTAGGAAGGGCCACGGTTaGTCGGCAGGCTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PGPAQLLGPCCLVSSATPRKGHG*SAGSGP
Trigger: AGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCT...AGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATTCGAGACAGAGGAGCTaGCCCACCAGGACCTGGACT +
Preference number: 4 (lower is better)
Translates to: APRAASTGWGASEPSLSDSRQRS*PTRTWT
Trigger: AGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTCTCGA...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CAGCTGTCCAGGAAGGGCCACGGTTGCTCGGCAGGCTCAGGTCCTCCAGGCAGGTCGAGACAGAGGAGCTaGCCCACCAGGACCTGGACT +
Preference number: 4 (lower is better)
Translates to: QLSRKGHGCSAGSGPPGRSRQRS*PTRTWT
Trigger: AGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTCTCGA...CCTGCCTGGAGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCTGGACAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCCCGGCCCTGCTCAGCTaGTCGGGCCTTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ARFSAAGPGMWDHACPGFPALLS*SGLAAL
Trigger: CAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGG...GAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp ACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACCCAGTTCCCCGGCCCTaGTCAGCTGCTCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TRTWTWHGLRGSHRSKDDPVPRP*SAARAL
Trigger: CAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGG...GTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCAGGGTGGCTGCGAACTaGCCTCAGCCAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ARFSAAGPGMWDHACPGFRVAAN*PQPARP
Trigger: GGGCCTGGCTGGCTGAGGGCAGTTCGCAGCCACCCT...GAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTAGGGTGGCTGCGAACTaGCCTCAGCCAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GQVLSSRPRDVGPCLSWVRVAAN*PQPARP
Trigger: GGGCCTGGCTGGCTGAGGGCAGTTCGCAGCCACCCT...AACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTAGGGTGGCTGCGAACTaGCCTCAGCCAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GAGRSGPVGTLVTEQGHARVAAN*PQPARP
Trigger: GGGCCTGGCTGGCTGAGGGCAGTTCGCAGCCACCCT...AGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGTGTGGGGCACAGGGCGCTCACCGTGGGGGCTCTGCAGCTGAGCCATGGTGGCGGCTCACCCAGTGCCTaGATCAGTGCCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: CVGHRALTVGALQLSHGGGSPSA*ISASLL
Trigger: GAGCAAAGAGGCACTGATCCAGGCACTGGGTGAGCC...GCCACCATGGCTCAGCTGCAGAGCCCCCACGGTGAGCGCCCTGTGCCCCACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CCA 90 bp GGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTCTCCCCCAGCCCATTaGGCAGCTCAGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GHADPGPLRAQQVTATQASPPAH*AAQPAP
Trigger: GGGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGA...GGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGCCTCTCCCCCAGCCCATTaGGCAGCTCAGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: WQCSGPQTPQGGCELPSASPPAH*AAQPAP
Trigger: GGGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGA...GGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGGGACAGGTGGGACTaGTTGAGGCCAGTGGTATCG +
Preference number: 4 (lower is better)
Translates to: LCTPSSLHGLGRLRALPFWDRWD*LRPVVS
Trigger: CGATACCACTGGCCTCAACCAGTCCCACCTGTCCCA...GAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CAGCTGTCCAGGAAGGGCCACGGTTGCTCGGCAGGCTCAGGTCCTCCAGGCAGGCGCTGTACGTGTCCATaGCCAGCTTGTGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QLSRKGHGCSAGSGPPGRRCTCP*PACAGR
Trigger: CCTTCCGGCACAAGCTGGCCATGGACACGTACAGCG...CCTGCCTGGAGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCTGGACAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp CAGCTGTCCAGGAAGGGCCACGGTTGCTCGGCAGGCTCAGGTCCTCCAGGCAGGCCCGTGGGGGACACTTaGTGGAGGGGTGTAGACACT +
Preference number: 4 (lower is better)
Translates to: QLSRKGHGCSAGSGPPGRPVGDT*WRGVDT
Trigger: AGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGG...CCTGCCTGGAGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCTGGACAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp GGAGGGTGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTGGGCTCTGGGTCACATaGCTCTGCACAGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: GGWWPEMPACEARTHWRPGLWVT*LCTGGM
Trigger: CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCC...AGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCACCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp ACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCCTCCCGTGTGGGTGTACTaGGCCACCTCGGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: TSQPRSSLPSRGRRPGWPPVWVY*ATSGLW
Trigger: CCACAAGCCCGAGGTGGCCCAGTACACCCACACGGG...AGGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTGGGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGCCCCCGTGTGGGTGTACTaGGCCACCTCGGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: WQCSGPQTPQGGCELPSAPVWVY*ATSGLW
Trigger: CCACAAGCCCGAGGTGGCCCAGTACACCCACACGGG...GGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGGGGAGCAGGCCCGTGTaGGTGTACTGGGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: GCWLRPGDVCSKLCSAVRGSRPV*VYWATS
Trigger: CGAGGTGGCCCAGTACACCCACACGGGCCTGCTCCC...CCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CCA 90 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGGAAGCCCGGACTCACTaGAGGCCTCAGTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RSCPTRTWTWHGLRGSHREARTH*RPQCLR
Trigger: CCTCAGACACTGAGGCCTCCAGTGAGTCCGGGCTTC...CCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTGGCAGGGTCCTGGCTaGGGACGTGGAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTWQGPG*GRGGWW
Trigger: CCACCACCCTCCACGTCCCCAGCCAGGACCCTGCCA...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTTGGCAGGGTCCTGGCTaGGGACGTGGAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GAGRSGPVGTLVTEQGHAWQGPG*GRGGWW
Trigger: CCACCACCCTCCACGTCCCCAGCCAGGACCCTGCCA...AGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGATGCTGGCAGGGTCCTaGCTGGGGACGTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKMLAGS*LGTWRV
Trigger: CACCCTCCACGTCCCCAGCCAGGACCCTGCCAGCAT...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCGCAGGTGCTGGATGCTaGCAGGGTCCTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GHADPGPLRAQQVTATQAAGAGC*QGPGWG
Trigger: TCCCCAGCCAGGACCCTGCCAGCATCCAGCACCTGC...GGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTGCAGGTGCTGGATGCTaGCAGGGTCCTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GTGCEAPTGVRTTSQPRSAGAGC*QGPGWG
Trigger: TCCCCAGCCAGGACCCTGCCAGCATCCAGCACCTGC...ACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTGCCGGCTGCAGGTGCTaGATGCTGGCAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTAGCRC*MLAGSW
Trigger: CCAGGACCCTGCCAGCATCCAGCACCTGCAGCCGGC...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGAGATGAAGGTCTCGATGACGCTGTGGTTGGATGGCAGCAGGTGGCTCTGGCCGCAGCCTCCACGGGTTaGGGCGCCTCAGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GDEGLDDAVVGWQQVALAAASTG*GASEPS
Trigger: GGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGC...GGCCAGAGCCACCTGCTGCCATCCAACCACAGCGTCATCGAGACCTTCATCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGTGTGGCTGCCAGAGTaGTGTAGCGGTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTVWLPE*CSGPRA
Trigger: AGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
3UTR CAA 72 bp TGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTaGCTGCCTTGTGAGCTCAGCTACTCCTGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: WPVPRPCSAARA*LPCELSYSCPK
Trigger: TTTGGGGCAGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
CDS-3UTR TCA 90 bp GCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTATGGGAGTGCCCTTGTTaGGGTGTTGGGACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AAPPGPGLGTGCEAPTGVWECPC*GVGTGG
Trigger: CCCACCTGTCCCAACACCTCAACAAGGGCACTCCCA...TACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTGGGGCCCCCAGCTGCTaGGACCAGCTTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GQVLSSRPRDVGPCLSWVGAPSC*DQLGFC
Trigger: ACAGAAGCCAAGCTGGTCTCAGCAGCTGGGGGCCCC...AACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp TCCTGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGGGGCCCCCAGCTGCTaGGACCAGCTTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SWQCSGPQTPQGGCELPSGAPSC*DQLGFC
Trigger: ACAGAAGCCAAGCTGGTCTCAGCAGCTGGGGGCCCC...TGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp TGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGCCTCTGCACAGGTGGCATaGGCGGCTGCTGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: WQCSGPQTPQGGCELPSASAQVA*AAAGRR
Trigger: CCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGA...GGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp AAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGGGGGCTCTGCAGCTaGGCCATGGTGGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: KCGCQSGVAVPGLSIGPGWGLCS*AMVAMK
Trigger: CTTCATGGCCACCATGGCTCAGCTGCAGAGCCCCCA...GCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGCACAGGCCTGTGTCCTaGGAAGTGTGGCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: VWLPEWCSGPRALHRPRLHRPVS*EVWLPE
Trigger: CTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTG...CAGCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGGTAGACGCGGTACACTaGAGGCCAGGTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AWPVPRPCSAARALLPCEVDAVH*RPGSQQ
Trigger: CTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTAC...CTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp AGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAAGCAGAGCAGCCTCCTaGGCCCGGGGGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RFSAAGPGMWDHACPGFTSRAAS*ARGMWG
Trigger: CCCCCACATCCCCCGGGCTCAGGAGGCTGCTCTGCT...TGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541395.5
CDS-3UTR GCA 90 bp TCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGACCCCCTCCTGCCCCACCGCGTGGGTTaGGTTTGCCTGCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SYICHEQALLLALHDPLLPHRVG*VCLPAG
Trigger: GCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGG...CAGGAGGGGGTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257555.11
ENST00000560968.5
CDS-3UTR GCA 90 bp ATGGTCATGACCCCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGCCCCACCGCGTGGGTTaGGTTTGCCTGCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: MVMTPGSEAMMRFWGCWLPHRVG*VCLPAG
Trigger: GCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGG...CAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGGGGTCATGACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp CACCTCAGCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCGCCAGGAGCTCCGTCTaGAGCTGGCTCAGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: HLSLASSPALLSCSGLAAARSSV*SWLSLE
Trigger: TTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGC...GGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGCTGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGGGCGGCCCGCTTCTaGGTCTTCATGGGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: AMVAMKGLWVTWLCTGGMRAARF*VFMGVP
Trigger: GGGCACTCCCATGAAGACGCAGAAGCGGGCCGCCCT...CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000560968.5
CDS-3UTR GCA 90 bp ACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACCAGCCCTCCCTGCCCTaGATGGGTGAACTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: TRTWTWHGLRGSHRSKDDQPSLP*MGELLR
Trigger: GCGCAGCAGTTCACCCATGCAGGGCAGGGAGGGCTG...GTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GTTCTGGGGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCGGCACACTCTGTGCCTaGGTGGAGGCCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: VLGLLVEAWGCLLQAVQCGTLCA*VEARPM
Trigger: CATCGGCCTGGCCTCCACGCAGGCACAGAGTGTGCC...GCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR GCA 90 bp GGTGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTGTGATGAGCATAGTCTaGGGGAGCAGGCCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: GGGLRCRRVKPGLTGGLSVMSIV*GSRPVW
Trigger: CCACACGGGCCTGCTCCCGCAGACTATGCTCATCAC...ACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp GGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGGTGGTGGCCTGAGATaGCGGCGTGTGAAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: GAGRSGPVGTLVTEQGHAGGGLR*RRVKPG
Trigger: TCCGGGCTTCACACGCCGGCATCTCAGGCCACCACC...AGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGGGTACAGCACCAGGCTaGTGGAGGACACTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GHEGALGHMALHRWHERLGTAPG*WRTLWG
Trigger: GCCCCACAGTGTCCTCCAGCAGCCTGGTGCTGTACC...CAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp TGTGTGGGGCACAGGGCGCTCACCGTGGGGGCTCTGCAGCTGAGCCATGGTGGCTCTATCATCATCTCCTaGTGTGTGGGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: CVGHRALTVGALQLSHGGSIIIS*CVGHRA
Trigger: CGCCCTGTGCCCCACACAGCAGGAGATGATGATAGA...GCCACCATGGCTCAGCTGCAGAGCCCCCACGGTGAGCGCCCTGTGCCCCACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp GGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGCCTCCCCCACCGCGTaGGTTGCGTTTGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GCGTMLVLGSQAPLSLLAASPTA*VAFACR
Trigger: CCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGC...TGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257555.11
ENST00000560968.5
CDS-3UTR CCA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCTCCCCCAGCCCATTaGGCAGCTCAGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTSPPAH*AAQPAP
Trigger: GGGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGA...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAACCACGGCTTTCTGGTaGGCCGCCTCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PMTRVEAPVLVNVGPREATTAFW*AASSGL
Trigger: CAGCCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGT...TGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGTCCACCACGGCTTTCTaGTGGGCCGCCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLLVEAWGCLLQAVQCCQSTTAF*WAASSG
Trigger: CCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGTGGA...CTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CCA 90 bp GGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTCACCGTGGACCTTACTaGGGGAGAGGGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GTGCEAPTGVRTTSQPRSHRGPY*GRGQVE
Trigger: CTCCACCTGCCCTCTCCCCCAGTAAGGTCCACGGTG...ACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp CACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTTGGGCTCCAGGCCCGTaGGGGACACTTGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: HADPGPLRAQQVTATQACWAPGP*GTLGGG
Trigger: CCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCA...ACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp AGCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATTGGGCTCCAGGCCCGTaGGGGACACTTGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SHGGHEGALGHMALHRWHWAPGP*GTLGGG
Trigger: CCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCA...ATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CCA 90 bp CAGCTGTCCAGGAAGGGCCACGGTTGCTCGGCAGGCTCAGGTCCTCCAGGCAGGATGGCTCTGCACAGGTaGCATGAGCGGCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: QLSRKGHGCSAGSGPPGRMALHR*HERLLV
Trigger: TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCAT...CCTGCCTGGAGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCTGGACAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp ATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGGAGCAGGCCCGTGTaGGTGTACTGGGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: MVAMKGLWVTWLCTGGMSGSRPV*VYWATS
Trigger: CGAGGTGGCCCAGTACACCCACACGGGCCTGCTCCC...GCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp GGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTTGGGGACGTGGAGGGTaGTGGCCTGAGATGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GCEAPTGVRTTSQPRSSLWGRGG*WPEMPA
Trigger: CGCCGGCATCTCAGGCCACCACCCTCCACGTCCCCA...AAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTGGGGACGTGGAGGGTaGTGGCCTGAGATGCCGGCG +
Preference number: 4 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGWGRGG*WPEMPA
Trigger: CGCCGGCATCTCAGGCCACCACCCTCCACGTCCCCA...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTGGGGACGTGGAGGGTaGTGGCCTGAGATGCCGGCG +
Preference number: 4 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSWGRGG*WPEMPA
Trigger: CGCCGGCATCTCAGGCCACCACCCTCCACGTCCCCA...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACTGCCCCACCAGGACCTaGACTTGGCACGGGTTGCGA +
Preference number: 4 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDCPTRT*TWHGLR
Trigger: TCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCA...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGCCACTCGCCCCGGCTaGCTACAAGCTGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: APRLLSVSPVHTGSSCALATRPG*LQAAGG
Trigger: ACCCCCTGCAGCTTGTAGCCAGCCGGGGCGAGTGGC...CAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
3UTR CAA 72 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTaGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCA +
Preference number: 4 (lower is better)
Translates to: RSCPTRTWTWHG*RGSHRSKDDFP
Trigger: TGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
CDS-3UTR TCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAAGGCCAGGGGAGCTGTaGGCGGGCAGCGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTRPGEL*AGSAGP
Trigger: GGGACCTGCGCTGCCCGCTCACAGCTCCCCTGGCCT...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR TCA 90 bp GTTCTGGGGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTCTGGGGCTGCTGGTTaGGGCCTGGGGATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VLGLLVEAWGCLLQAVQCSGAAG*GLGMSA
Trigger: AGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGA...GCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR TCA 90 bp AAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTCTGGGGCTGCTGGTTaGGGCCTGGGGATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: KARFSAAGPGMWDHACPGSGAAG*GLGMSA
Trigger: AGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGA...CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCCATGACCCCAGGAAGTaGGGCCATGATGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPHDPRK*GHDEVL
Trigger: CAGAACCTCATCATGGCCTCACTTCCTGGGGTCATG...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGGTATGGGGGCTCTGCAGCTaGGCCATGGTGGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: EGALGHMALHRWHERLLVWGLCS*AMVAMK
Trigger: CTTCATGGCCACCATGGCTCAGCTGCAGAGCCCCCA...TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCACGCGTGGGTTGCGTTTaGCTGCCGGCCGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: GCGTMLVLGSQAPLSLLARVGCV*LPAGRH
Trigger: GTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCG...TGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257555.11
ENST00000560968.5
CDS-3UTR GCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACCCCACCGCGTGGGTTaGGTTTGCCTGCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTPHRVG*VCLPAG
Trigger: GCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGG...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp AGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACCCCCACCGCGTGGGTTaGGTTTGCCTGCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SDSPSYICHEQALLLALHPHRVG*VCLPAG
Trigger: GCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGG...GTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257555.11
ENST00000560968.5
CDS-3UTR GCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGGGCGGCCCGCTTCTaGGTCTTCATGGGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSRAARF*VFMGVP
Trigger: GGGCACTCCCATGAAGACGCAGAAGCGGGCCGCCCT...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATGGTCATGACCTGCGCCACCTCTCGCTaGTTGCGGACGTACCAGGTG +
Preference number: 4 (lower is better)
Translates to: LVNVGPREAGSPGPMVMTCATSR*LRTYQV
Trigger: CACCTGGTACGTCCGCAAGCAGCGAGAGGTGGCGCA...GGTCATGACCATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp TCCTGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGCCTGGAACAGGATCTaGTGGGATGCTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SWQCSGPQTPQGGCELPSAWNRI*WDAGPH
Trigger: GTGGGGCCCAGCATCCCAGCAGATCCTGTTCCAGGC...TGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGGCCTGGAACAGGATCTaGTGGGATGCTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GCWLRPGDVCSKLCSAVRAWNRI*WDAGPH
Trigger: GTGGGGCCCAGCATCCCAGCAGATCCTGTTCCAGGC...CCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000541924.5
CDS-3UTR GCA 90 bp TGGCTGGGCTCCAGGCCCGTGGGGGACACTTGGTGGAGGGGTGTAGACACTGTCCTAAGGGACCGCCGCTaGTTGAGGGTACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WLGSRPVGDTWWRGVDTVLRDRR*LRVLLQ
Trigger: CTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCTTAG...GACAGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR GCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTGGCACACTCTGTGCCTaGGTGGAGGCCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSGTLCA*VEARPM
Trigger: CATCGGCCTGGCCTCCACGCAGGCACAGAGTGTGCC...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCGTGATGAGCATAGTCTaGGGGAGCAGGCCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: KCGCQSGVAVPGLSIGPGVMSIV*GSRPVW
Trigger: CCACACGGGCCTGCTCCCGCAGACTATGCTCATCAC...GCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGTGGTGGCCTGAGATaGCGGCGTGTGAAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: APRLLSVSPVHTGSSCALGGGLR*RRVKPG
Trigger: TCCGGGCTTCACACGCCGGCATCTCAGGCCACCACC...CAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCGCTGCAGGTGCTGGATaGTGGCAGGGTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GHPRPFPESQGRRGTLKAAAGAG*WQGPGW
Trigger: CCAGCCAGGACCCTGCCAGCATCCAGCACCTGCAGC...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGAGGAAGGGCCACGGTTaGTCGGCAGGCTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GCWLRPGDVCSKLCSAVRRKGHG*SAGSGP
Trigger: AGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCT...CCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR GCA 90 bp GGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCAACAAGGGCAGGGTCTaGAGGGCGCTCGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: GHADPGPLRAQQVTATQANKGRV*RALETE
Trigger: CTCTGTCTCGAGCGCCCTGCAGACCCTGCCCTTGTT...GGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGGAGCTCAGCTACTCCTaGCCCAAACAAGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VWLPEWCSGPRALHRPRLELSYS*PKQGQG
Trigger: ACCCTGCCCTTGTTTGGGGCAGGAGTAGCTGAGCTC...CAGCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCCGGCCCTGCTCAGCTaGTCGGGCCTTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: RDVGPCLSWVHRLLCPSWPALLS*SGLAAL
Trigger: CAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGG...CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GTGGCTGGGCTCCAGGCCCGTGGGGGACACTTGGTGGAGGGGTGTAGACACTGTTGTCCCTCCTGGCAGTaGTCAGGACCTCAGACTCCT +
Preference number: 4 (lower is better)
Translates to: VAGLQARGGHLVEGCRHCCPSWQ*SGPQTP
Trigger: AGGAGTCTGAGGTCCTGAGCACTGCCAGGAGGGACA...ACAGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR GCA 90 bp TGCTGGGATGCTGGGCCCCACTTGAAACGGTTCCTCCGCCCCTTCTTGGTTGGTACAAGCTGCAGGGGGTaGCGGGTCACCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CWDAGPHLKRFLRPFLVGTSCRG*RVTPGL
Trigger: AAGGCCTGGGGTGACCCGGCACCCCCTGCAGCTTGT...ACCAACCAAGAAGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATCCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR GCA 90 bp GCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGACAAGCTGCAGGGGGTaGCGGGTCACCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: APRLLSVSPVHTGSSCALTSCRG*RVTPGL
Trigger: AAGGCCTGGGGTGACCCGGCACCCCCTGCAGCTTGT...CAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGTGGAGATGAAGGTCTCGATGACGCTGTGGTTGGATGGCAGCAGGTGGCTCTGCGGCTGGCTACAAGCTaGAGGGGGTGCCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: GGDEGLDDAVVGWQQVALRLATS*RGCRVT
Trigger: GGTGACCCGGCACCCCCTGCAGCTTGTAGCCAGCCG...CAGAGCCACCTGCTGCCATCCAACCACAGCGTCATCGAGACCTTCATCTCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp GTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCGCAGACTGCAATGCCTaGCAGGCACCCCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VAMKGLWVTWLCTGGMSGADCNA*QAPLSP
Trigger: AGGGGAAAGGGGTGCCTGGCAGGCATTGCAGTCTGC...GCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp GCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGGATGCATTCCGCCGCTaGGCCACCTCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AMVAMKGLWVTWLCTGGMDAFRR*ATSRCL
Trigger: CAAGCAGCGAGAGGTGGCGCAGCGGCGGAATGCATC...CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538646.5
CDS-3UTR GCA 90 bp GAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGGTAACACCCCTCTCTGGATaGATTCCGCCGCTGCGCCAC +
Preference number: 4 (lower is better)
Translates to: EGALGHMALHRWHERLLVTPLSG*IPPLRH
Trigger: GTGGCGCAGCGGCGGAATGCATCCAGAGAGGGGTGT...TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538646.5
CDS-3UTR CCA 90 bp GGAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATAGCTCCGTCTGCAGCTaGCTCAGTTTAGAAACCATG +
Preference number: 4 (lower is better)
Translates to: GGHCGAGAEPVGRLQVLDSSVCS*LSLETM
Trigger: CATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCT...ATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp GTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGGGCTCACCCAGTGCCTaGATCAGTGCCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: VWLPEWCSGPRALHRPRLGSPSA*ISASLL
Trigger: GAGCAAAGAGGCACTGATCCAGGCACTGGGTGAGCC...CAGCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGAGGCCTGGGGATTCTCCCCCAGCCCATTaGGCAGCTCAGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PGSEAMMRFWGCWLRPGDSPPAH*AAQPAP
Trigger: GGGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGA...ATCCCCAGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CCA 90 bp CATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGTCTCCCCCAGCCCATTaGGCAGCTCAGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: HGGHEGALGHMALHRWHESPPAH*AAQPAP
Trigger: GGGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGA...CTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCACCACGGCTTTCTGGTaGGCCGCCTCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGTTAFW*AASSGL
Trigger: CAGCCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGT...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTACCACGGCTTTCTGGTaGGCCGCCTCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HADPGPLRAQQVTATQACTTAFW*AASSGL
Trigger: CAGCCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGT...ACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCACCACGGCTTTCTaGTGGGCCGCCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSSTTAF*WAASSG
Trigger: CCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGTGGA...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATTCCACCACGGCTTTCTaGTGGGCCGCCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SHGGHEGALGHMALHRWHSTTAF*WAASSG
Trigger: CCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGTGGA...ATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTAGGTGTTGGGACAGGTaGGACTGGTTGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PGPAQLLGPCCLVSSATPRCWDR*DWLRPV
Trigger: CACTGGCCTCAACCAGTCCCACCTGTCCCAACACCT...AGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGCCTCCCTGCCCTGCATaGGTGAACTGCTGCGCCACC +
Preference number: 4 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGPPCPA*VNCCAT
Trigger: GGTGGCGCAGCAGTTCACCCATGCAGGGCAGGGAGG...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGTGGAACAGGATCTGCTaGGATGCTGGGCCCCACTTG +
Preference number: 4 (lower is better)
Translates to: VWLPEWCSGPRALHRPRLWNRIC*DAGPHL
Trigger: CAAGTGGGGCCCAGCATCCCAGCAGATCCTGTTCCA...CAGCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATCTTCTTTGCGCCGGTTaGCAAACCAGTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: GGHCGAGAEPVGRLQVLDLLCAG*QTSCRH
Trigger: GTGTCTACAACTGGTTTGCCAACCGGCGCAAAGAAG...ATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CCA 90 bp ACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACCACCGTGGACCTTACTaGGGGAGAGGGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TRTWTWHGLRGSHRSKDDHRGPY*GRGQVE
Trigger: CTCCACCTGCCCTCTCCCCCAGTAAGGTCCACGGTG...GTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp CCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCACACCGTGGACCTTACTaGGGGAGAGGGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PMTRVEAPVLVNVGPREAHRGPY*GRGQVE
Trigger: CTCCACCTGCCCTCTCCCCCAGTAAGGTCCACGGTG...TGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000540108.1
CDS-3UTR CCA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGCCCGTGGGGGACACTTaGTGGAGGGGTGTAGACACT +
Preference number: 4 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKPVGDT*WRGVDT
Trigger: AGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGG...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp GGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGGTTCTGGGGCTGCTaGTTGAGGCCTGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: GTGCEAPTGVRTTSQPRSRFWGC*LRPGDV
Trigger: GACATCCCCAGGCCTCAACCAGCAGCCCCAGAACCT...ACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACAGGTTCTGGGGCTGCTaGTTGAGGCCTGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDRFWGC*LRPGDV
Trigger: GACATCCCCAGGCCTCAACCAGCAGCCCCAGAACCT...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGCCATGATGAGGTTCTaGGGCTGCTGGTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTAMMRF*GCWLRP
Trigger: AGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGC...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAATGGCTCTGCACAGGTaGCATGAGCGGCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: AAPPGPGLGTGCEAPTGVMALHR*HERLLV
Trigger: TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCAT...TACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GCCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCGGGCTCTGGGTCACATaGCTCTGCACAGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: ADDQGGGTCVGERRTQGGGLWVT*LCTGGM
Trigger: CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCC...GCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGCCATGAAGGGGCTCTaGGTCACATGGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTAMKGL*VTWLCT
Trigger: TGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGC...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGGTAGGAGGGGTGCAGCGGGCCATGAAGGGGCTCTaGGTCACATGGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: HMALHRWHERLLVGGVQRAMKGL*VTWLCT
Trigger: TGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGC...CCGCTGCACCCCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGGAGCAGGCCCGTGTaGGTGTACTGGGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: RFSAAGPGMWDHACPGFTGSRPV*VYWATS
Trigger: CGAGGTGGCCCAGTACACCCACACGGGCCTGCTCCC...TGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCGAAGCCCGGACTCACTaGAGGCCTCAGTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GHADPGPLRAQQVTATQAEARTH*RPQCLR
Trigger: CCTCAGACACTGAGGCCTCCAGTGAGTCCGGGCTTC...GGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCGGACGTGGAGGGTGGTaGCCTGAGATGCCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGGRGGW*PEMPAC
Trigger: ACACGCCGGCATCTCAGGCCACCACCCTCCACGTCC...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACATGGCAGGGTCCTGGCTaGGGACGTGGAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTWQGPG*GRGGWW
Trigger: CCACCACCCTCCACGTCCCCAGCCAGGACCCTGCCA...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCGCAGGTGCTGGATGCTaGCAGGGTCCTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSAGAGC*QGPGWG
Trigger: TCCCCAGCCAGGACCCTGCCAGCATCCAGCACCTGC...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGGCTCTGGCCATTGCTaGAGTCTGAGCTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: APRAASTGWGASEPSLSDGSGHC*SLSSGT
Trigger: TGTACCAGAGCTCAGACTCCAGCAATGGCCAGAGCC...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGGGCTCTGGCCATTGCTaGAGTCTGAGCTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: RSCPTRTWTWHGLRGSHRGSGHC*SLSSGT
Trigger: TGTACCAGAGCTCAGACTCCAGCAATGGCCAGAGCC...CCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGGGCAGCAGGTGGCTCTaGCCATTGCTGGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKGSRWL*PLLESE
Trigger: CTCAGACTCCAGCAATGGCCAGAGCCACCTGCTGCC...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGCATGTCTCGATGACGCTGTaGTTGGATGGCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PEQPPRVGAPQSPPFLMHVSMTL*LDGSRW
Trigger: CCACCTGCTGCCATCCAACCACAGCGTCATCGAGAC...ATGCATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCATGTGGGTCACTAGCTaGAAGGAGTTGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LCTPSSLHGLGRLRALPFMWVTS*KELGQE
Trigger: TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACAT...GAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCGGAGGTCATGGGGCCTaGGAGAGGGAATCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSGGHGA*ERESLG
Trigger: CCCCAGCGATTCCCTCTCCCAGGCCCCATGACCTCC...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp ACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACACCAGGACCTGGACTTaGCACGGGTTGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TRTWTWHGLRGSHRSKDDTRTWT*HGLRGS
Trigger: GGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT...GTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGTAGCTCCTGTGCCCTaGGGTCACCTCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: APRAASTGWGASEPSLSDVAPVP*GHLFLL
Trigger: GAGAAGAAAGAGGTGACCCCAGGGCACAGGAGCTAC...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTTCAGACTCCTCAGGGTaGCTGCGAACTGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GTGCEAPTGVRTTSQPRSSDSSG*LRTALS
Trigger: GCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGA...ACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGACAGGTGGGACTGGTTaGGGCCAGTGGTATCGACCA +
Preference number: 4 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKTGGTG*GQWYRP
Trigger: TGGTCGATACCACTGGCCTCAACCAGTCCCACCTGT...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCATGCTGGGCCCCACTTaGAACGGTTCCTCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: PESQGRRGTLKARFSAAGMLGPT*NGSSAP
Trigger: AGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCAT...GCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp TGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGGTGGGGACCGCCGCTGCTTaGGGGTACTTCTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: CWLRPGDVCSKLCSAVRVGTAAA*GYFCSL
Trigger: GAGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCC...CACCCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR TCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCTCTGGGGCTGCTGGTTaGGGCCTGGGGATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GHPRPFPESQGRRGTLKASGAAG*GLGMSA
Trigger: AGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGA...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACACATGACCCCAGGAAGTaGGGCCATGATGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTHDPRK*GHDEVL
Trigger: CAGAACCTCATCATGGCCTCACTTCCTGGGGTCATG...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp ATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCTCTGCACAGGTGGCATaGGCGGCTGCTGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: MVAMKGLWVTWLCTGGMSSAQVA*AAAGRR
Trigger: CCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGA...GCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGGAGGCCTCAGTGTCTaGGGTGAAGACCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDGGLSV*GEDLLG
Trigger: ACCAAGCAGGTCTTCACCTCAGACACTGAGGCCTCC...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000560968.5
CDS-3UTR TCA 90 bp GGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGGCCATTGCTGGAGTCTaGGCTCTGGTACAGCACCAG +
Preference number: 4 (lower is better)
Translates to: GHEGALGHMALHRWHERLAIAGV*ALVQHQ
Trigger: CTGGTGCTGTACCAGAGCTCAGACTCCAGCAATGGC...CAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR TCA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATCTCCTACATCTGCCATaGACAGGCTTTGCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: APRAASTGWGASEPSLSDLLHLP*TGFAPS
Trigger: GCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAG...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGTAGACGCGGTACACTaGAGGCCAGGTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDVDAVH*RPGSQQ
Trigger: CTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTAC...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp AGGTTGGTGGTGTCGGTGATGAGCATAGTCTGCGGGAGCAGGCCCGTGTGGGTGCCTGCCCTGCATGGGTaGACTTGCAGAAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RLVVSVMSIVCGSRPVWVPALHG*TCRRVS
Trigger: GGAGACCCTTCTGCAAGTTCACCCATGCAGGGCAGG...CACCCACACGGGCCTGCTCCCGCAGACTATGCTCATCACCGACACCACCAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR TCA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCGGAGGCCTCAGTGTCTaGGGTGAAGACCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSGGLSV*GEDLGE
Trigger: CTCCCCCAGGTCTTCACCTCAGACACTGAGGCCTCC...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000541395.5
CDS-3UTR TCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGCAGGCTGTGGCTGTaGTGGGGACACCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GHPRPFPESQGRRGTLKASRLWL*WGHPSL
Trigger: CAGAGAGGGGTGTCCCCATCACAGCCACAGCCTGCT...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560968.5
CDS-3UTR GCA 90 bp TCCTGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCATGGGTTGCGTTTGCCTaGCGGCCGGCAGACACAAAC +
Preference number: 4 (lower is better)
Translates to: SWQCSGPQTPQGGCELPSWVAFA*RPADTN
Trigger: GTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCA...TGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257555.11
ENST00000560968.5
CDS-3UTR GCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAAACCATGGCTCGGCTaGCACAGGGCCACGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHKPWLG*HRATRP
Trigger: GGGCCGCGTGGCCCTGTGGCAGCCGAGCCATGGTTT...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTGCCAGGAGCTCCGTCTaGAGCTGGCTCAGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: PGPAQLLGPCCLVSSATPARSSV*SWLSLE
Trigger: TTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGC...AGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTCCCCGGCTCACCCAGTaGCTGGATCAGTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTPRLTQ*LDQCLF
Trigger: AAAGAGGCACTGATCCAGGCACTGGGTGAGCCGGGG...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGAGGGCGGCCCGCTTCTaGGTCTTCATGGGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: RDVGPCLSWVHRLLCPSWRAARF*VFMGVP
Trigger: GGGCACTCCCATGAAGACGCAGAAGCGGGCCGCCCT...CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGGTGTGCGCCACCTCTCGCTaGTTGCGGACGTACCAGGTG +
Preference number: 4 (lower is better)
Translates to: CWLRPGDVCSKLCSAVRVCATSR*LRTYQV
Trigger: CACCTGGTACGTCCGCAAGCAGCGAGAGGTGGCGCA...CACCCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACACAGCCCTCCCTGCCCTaGATGGGTGAACTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTQPSLP*MGELLR
Trigger: GCGCAGCAGTTCACCCATGCAGGGCAGGGAGGGCTG...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTCAGCCCTCCCTGCCCTaGATGGGTGAACTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPQPSLP*MGELLR
Trigger: GCGCAGCAGTTCACCCATGCAGGGCAGGGAGGGCTG...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp ATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGCCTGGAACAGGATCTaGTGGGATGCTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: MVAMKGLWVTWLCTGGMSAWNRI*WDAGPH
Trigger: GTGGGGCCCAGCATCCCAGCAGATCCTGTTCCAGGC...GCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGTCCATGGCCAGCTTGTaGCGGAAGGCTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: RSCPTRTWTWHGLRGSHRSMASL*RKASSL
Trigger: CAAAGAAGAAGCCTTCCGGCACAAGCTGGCCATGGA...CCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR GCA 90 bp AAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCAGGCCTGGGGATGTCTaGTCCAAGCTGTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: KCGCQSGVAVPGLSIGPGRPGDV*SKLCSA
Trigger: AGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCT...GCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGACCGGCACACTCTGTaGCTGCGTGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVDRHTL*LRGGQA
Trigger: GGCCTGGCCTCCACGCAGGCACAGAGTGTGCCGGTC...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAGGTGGTGGCCTGAGATaGCGGCGTGTGAAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTGGGLR*RRVKPG
Trigger: TCCGGGCTTCACACGCCGGCATCTCAGGCCACCACC...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTGGTACAGCACCAGGCTaGTGGAGGACACTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSGTAPG*WRTLWG
Trigger: GCCCCACAGTGTCCTCCAGCAGCCTGGTGCTGTACC...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGGGTGGCTCTGGCCATTaGTGGAGTCTGAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKGGSGH*WSLSSG
Trigger: ACCAGAGCTCAGACTCCAGCAATGGCCAGAGCCACC...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp ACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCCTCCTGAGAAGTGTGGCTaGCAGAGTGGTGTAGCGGTC +
Preference number: 4 (lower is better)
Translates to: TSQPRSSLPSRGRRPGWPPEKCG*QSGVAV
Trigger: GACCGCTACACCACTCTGGCAGCCACACTTCTCAGG...AGGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTGGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCAAGCCAGGAGAGCCCTaGCTGCCTTCCCTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: VAMKGLWVTWLCTGGMSGKPGEP*LPSLLA
Trigger: AGCTAACAGGGAAGGCAGGCAGGGCTCTCCTGGCTT...GCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp TTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATGGTCATGACCTCGAGACAGAGGAGCTaGCCCACCAGGACCTGGACT +
Preference number: 4 (lower is better)
Translates to: LVNVGPREAGSPGPMVMTSRQRS*PTRTWT
Trigger: AGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTCTCGA...GGTCATGACCATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR GCA 90 bp GGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCGAGCTCAGCTACTCCTaGCCCAAACAAGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GHADPGPLRAQQVTATQAELSYS*PKQGQG
Trigger: ACCCTGCCCTTGTTTGGGGCAGGAGTAGCTGAGCTC...GGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGACCCCCTCCTGCCGGCCCTGCTCAGCTaGTCGGGCCTTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SYICHEQALLLALHDPLLPALLS*SGLAAL
Trigger: CAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGG...CAGGAGGGGGTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTACCAGTTCCCCGGCCCTaGTCAGCTGCTCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVPVPRP*SAARAL
Trigger: CAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGG...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCACTCCTCAGGGTGGCTaGGAACTGCCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GHPRPFPESQGRRGTLKATPQGG*ELPSAS
Trigger: GCTGGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGT...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTACTCCTCAGGGTGGCTaGGAACTGCCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GCEAPTGVRTTSQPRSSLTPQGG*ELPSAS
Trigger: GCTGGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGT...AAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGAGGGATGTGGGACCATaGTTGTCCTGGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: VWLPEWCSGPRALHRPRLRDVGP*LSWVHR
Trigger: CCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT...CAGCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGACCCCCTCCTGCGGCTGGCTACAAGCTaGAGGGGGTGCCGGGTCACC +
Preference number: 4 (lower is better)
Translates to: SYICHEQALLLALHDPLLRLATS*RGCRVT
Trigger: GGTGACCCGGCACCCCCTGCAGCTTGTAGCCAGCCG...CAGGAGGGGGTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GTTCTGGGGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCGCAGACTGCAATGCCTaGCAGGCACCCCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VLGLLVEAWGCLLQAVQCADCNA*QAPLSP
Trigger: AGGGGAAAGGGGTGCCTGGCAGGCATTGCAGTCTGC...GCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp GGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGGGGAACACACTGGCCTaGAGACACCCTCAATCACGG +
Preference number: 4 (lower is better)
Translates to: GHEGALGHMALHRWHERLGNTLA*RHPQSR
Trigger: CCGTGATTGAGGGTGTCTGCAGGCCAGTGTGTTCCC...CAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp GCCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCGGGAACACACTGGCCTaGAGACACCCTCAATCACGG +
Preference number: 4 (lower is better)
Translates to: ADDQGGGTCVGERRTQGGGNTLA*RHPQSR
Trigger: CCGTGATTGAGGGTGTCTGCAGGCCAGTGTGTTCCC...GCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCGGCCTGGACCTTACCTaGTTGGTGGGCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGGLDLT*LVGVRL
Trigger: CAGCCTCACGCCCACCAAGCAGGTAAGGTCCAGGCC...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541395.5
CDS-3UTR CCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAGCCTCCCCCACCGCGTaGGTTGCGTTTGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTASPTA*VAFACR
Trigger: CCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGC...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp CATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGCGCCTCCCCCACCGCGTaGGTTGCGTTTGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: HPLTANLYHHLLLCGAQGASPTA*VAFACR
Trigger: CCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGC...GCCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGGGCTCACCCAGTGCCTaGATCAGTGCCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKGSPSA*ISASLL
Trigger: GAGCAAAGAGGCACTGATCCAGGCACTGGGTGAGCC...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCTTTGAGGATGGGTaGCGTGAAGTCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: AWPVPRPCSAARALLPCELFEDG*REVFPI
Trigger: GATGGGGAAGACTTCACGCCACCCATCCTCAAAGAG...CTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAACCACGGCTTTCTGGTaGGCCGCCTCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTTTAFW*AASSGL
Trigger: CAGCCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGT...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGTGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTTCCTCCGCCCCTTCTTaGTTGGTAGCTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: GGGLRCRRVKPGLTGGLSSSAPS*LVAHHL
Trigger: CAGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGA...ACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp GGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTTGGAACAGGATCTGCTaGGATGCTGGGCCCCACTTG +
Preference number: 4 (lower is better)
Translates to: GTGCEAPTGVRTTSQPRSWNRIC*DAGPHL
Trigger: CAAGTGGGGCCCAGCATCCCAGCAGATCCTGTTCCA...ACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp ACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCCTGGGGACACCCCTCTCTaGATGCATTCCGCCCTATTG +
Preference number: 4 (lower is better)
Translates to: TSQPRSSLPSRGRRPGWPGDTPL*MHSALL
Trigger: CAATAGGGCGGAATGCATCCAGAGAGGGGTGTCCCC...AGGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTGGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CACCTCAGCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCCTTCTTTGCGCCGGTTaGCAAACCAGTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: HLSLASSPALLSCSGLAALLCAG*QTSCRH
Trigger: GTGTCTACAACTGGTTTGCCAACCGGCGCAAAGAAG...GGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGCTGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp TTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATGGTCATGACCCGCTGTACGTGTCCATaGCCAGCTTGTGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LVNVGPREAGSPGPMVMTRCTCP*PACAGR
Trigger: CCTTCCGGCACAAGCTGGCCATGGACACGTACAGCG...GGTCATGACCATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000540108.1
CDS-3UTR CCA 90 bp GGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCGCTGTACGTGTCCATaGCCAGCTTGTGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GQVLSSRPRDVGPCLSWVRCTCP*PACAGR
Trigger: CCTTCCGGCACAAGCTGGCCATGGACACGTACAGCG...AACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACTGGGCTCCAGGCCCGTaGGGGACACTTGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHWAPGP*GTLGGG
Trigger: CCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCA...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp GGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGTGGGCTCCAGGCCCGTaGGGGACACTTGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GTLVTEQGHADPGPLRAQWAPGP*GTLGGG
Trigger: CCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCA...CTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp GGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGAGGTTCTGGGGCTGCTaGTTGAGGCCTGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: GCWLRPGDVCSKLCSAVRRFWGC*LRPGDV
Trigger: GACATCCCCAGGCCTCAACCAGCAGCCCCAGAACCT...CCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CCA 90 bp GCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATGATGGCTCTGCACAGGTaGCATGAGCGGCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: APVLVNVGPREAGSPGPMMALHR*HERLLV
Trigger: TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCAT...CATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGGACGCTGTGGTTGGATaGCAGCAGGTGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGDAVVG*QQVALA
Trigger: GGCCAGAGCCACCTGCTGCCATCCAACCACAGCGTC...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGAGGCCTGGGGATAGGGCCCAGGTGCCGTaGTTACTGGGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PGSEAMMRFWGCWLRPGDRAQVP*LLGGRG
Trigger: GCCTCTTCCTCCCAGTAACCACGGCACCTGGGCCCT...ATCCCCAGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CCA 90 bp AAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTCCATAGGCCCAGGCTaGGGGTGCCCAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: KARFSAAGPGMWDHACPGSIGPG*GCPSHR
Trigger: CCTATGACTTGGGCACCCCCAGCCTGGGCCTATGGA...CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGTCCATAGGCCCAGGCTaGGGGTGCCCAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: AMVAMKGLWVTWLCTGGMSIGPG*GCPSHR
Trigger: CCTATGACTTGGGCACCCCCAGCCTGGGCCTATGGA...CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTGTGTGGCTGCCAGAGTaGTGTAGCGGTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSVWLPE*CSGPRA
Trigger: AGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATGCTAGTACAAATGGCATGTaGGTCACTAGCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GHCGAGAEPVGRLQVLDASTNGM*VTSWKE
Trigger: CTCCTTCCAGCTAGTGACCCACATGCCATTTGTACT...AGCATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGACCAGGACCTGGACTTaGCACGGGTTGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HPRPFPESQGRRGTLKARTRTWT*HGLRGS
Trigger: GGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGTCAGACTCCTCAGGGTaGCTGCGAACTGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GLLVEAWGCLLQAVQCCQSDSSG*LRTALS
Trigger: GCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGA...CTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CCA 90 bp CATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGGCAGGCCCAGGGATGTaGGACCATGCTTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HGGHEGALGHMALHRWHEAGPGM*DHACPG
Trigger: CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGC...CTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp CATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGTCATCTCCTGCTGTGTaGGGCACAGGGCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: HGGHEGALGHMALHRWHESSPAV*GTGRSP
Trigger: CGGTGAGCGCCCTGTGCCCCACACAGCAGGAGATGA...CTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp GGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTTCTGAGGTGAAGACCTaGGGGAGCAGAGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GAGRSGPVGTLVTEQGHASEVKT*GSRAAS
Trigger: GGAGGCTGCTCTGCTCCCCCAGGTCTTCACCTCAGA...AGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541395.5
CDS-3UTR TCA 90 bp CCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGAGGCCTGGGGATGCTGCAGGTAGGACTTaGCCATCTTCGCCACACGCC +
Preference number: 4 (lower is better)
Translates to: PGSEAMMRFWGCWLRPGDAAGRT*PSSPHA
Trigger: GGCGTGTGGCGAAGATGGTCAAGTCCTACCTGCAGC...ATCCCCAGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR TCA 90 bp GGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAATGCTGGGCCCCACTTaGAACGGTTCCTCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: GCGTMLVLGSQAPLSLLAMLGPT*NGSSAP
Trigger: AGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCAT...TGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCCATGACCCCAGGAAGTaGGGCCATGATGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VAMKGLWVTWLCTGGMSGHDPRK*GHDEVL
Trigger: CAGAACCTCATCATGGCCTCACTTCCTGGGGTCATG...GCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGCATGACCCCAGGAAGTaGGGCCATGATGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GHEGALGHMALHRWHERLHDPRK*GHDEVL
Trigger: CAGAACCTCATCATGGCCTCACTTCCTGGGGTCATG...CAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GTCATGACCCCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGAGGTGGGGGCTCTGCAGCTaGGCCATGGTGGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: VMTPGSEAMMRFWGCWLRWGLCS*AMVAMK
Trigger: CTTCATGGCCACCATGGCTCAGCTGCAGAGCCCCCA...CCTCAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGGGGTCATGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR TCA 90 bp TGCTGGGATGCTGGGCCCCACTTGAAACGGTTCCTCCGCCCCTTCTTGGTTGGTCCTCAGTGTCTGAGGTaGAGACCTGCTTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: CWDAGPHLKRFLRPFLVGPQCLR*RPAWWA
Trigger: CGCCCACCAAGCAGGTCTTCACCTCAGACACTGAGG...ACCAACCAAGAAGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR TCA 90 bp GCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCGCCATTGCTGGAGTCTaGGCTCTGGTACAGCACCAG +
Preference number: 4 (lower is better)
Translates to: ARFSAAGPGMWDHACPGFAIAGV*ALVQHQ
Trigger: CTGGTGCTGTACCAGAGCTCAGACTCCAGCAATGGC...GAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CTGGAACAGGATCTGCTGGGATGCTGGGCCCCACTTGAAACGGTTCCTCCGCCCCGGTGGGTACATTGGTaGCAGAACAAGGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: LEQDLLGCWAPLETVPPPRWVHW*QNKATL
Trigger: CAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCG...GGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATCCCAGCAGATCCTGTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR TCA 90 bp CCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGCATGCCTGTGTGAGTAGGTaGTGGGGTCAGTACAAATGG +
Preference number: 4 (lower is better)
Translates to: PEQPPRVGAPQSPPFLMHACVSR*WGQYKW
Trigger: CCATTTGTACTGACCCCATCACCTACTCACACAGGC...ATGCATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp ACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAGGCTCAAGGCCCCCAGGCTTCTaGGTGTTAGTCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: TRVEAPVLVNVGPREAGSRPPGF*VLVLST
Trigger: TGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCT...TGAGCCTGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR TCA 90 bp GGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTAGGCCCCCAGGCTTCTaGGTGTTAGTCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: GQVLSSRPRDVGPCLSWVRPPGF*VLVLST
Trigger: TGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCT...AACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACGCGTGGGTTGCGTTTaGCTGCCGGCCGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTRVGCV*LPAGRH
Trigger: GTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCG...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCCCACCGCGTGGGTTaGGTTTGCCTGCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PQSRKHTCPRDTCRLQCLPHRVG*VCLPAG
Trigger: GCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGG...CAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp GGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGGCCAGGAGCTCCGTCTaGAGCTGGCTCAGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: GHEGALGHMALHRWHERLARSSV*SWLSLE
Trigger: TTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGC...CAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGGGATCAGTGCCTCTTTaGTCAGCCCTGACTCGAGCA +
Preference number: 4 (lower is better)
Translates to: GHEGALGHMALHRWHERLGSVPL*SALTRA
Trigger: TGCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCC...CAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTGTGGATCAGTGCCTCTTTaGTCAGCCCTGACTCGAGCA +
Preference number: 4 (lower is better)
Translates to: WWPEMPACEARTHWRPQCGSVPL*SALTRA
Trigger: TGCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCC...ACACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAGGGCGGCCCGCTTCTaGGTCTTCATGGGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHRAARF*VFMGVP
Trigger: GGGCACTCCCATGAAGACGCAGAAGCGGGCCGCCCT...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTGCATGGGTGAACTGCTaGGCCACCTCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HADPGPLRAQQVTATQACAWVNC*ATSRCL
Trigger: CAAGCAGCGAGAGGTGGCGCAGCAGTTCACCCATGC...ACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGCCTGGAACAGGATCTaGTGGGATGCTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPAWNRI*WDAGPH
Trigger: GTGGGGCCCAGCATCCCAGCAGATCCTGTTCCAGGC...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACATGCATTCCGCCCTATTaGACTCCTCCACTAGCGTCT +
Preference number: 4 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTCIPPY*TPPLAS
Trigger: AGACGCTAGTGGAGGAGTGCAATAGGGCGGAATGCA...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAACACCCCTCTCTGGATaGATTCCGCCCTATTGCACT +
Preference number: 4 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTTPLSG*IPPYCT
Trigger: AGTGCAATAGGGCGGAATGCATCCAGAGAGGGGTGT...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTGGAAGGCTTCTTCTTTaGGCCGGTTGGCAAACCAGT +
Preference number: 4 (lower is better)
Translates to: PGPAQLLGPCCLVSSATPGRLLL*AGWQTS
Trigger: ACTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCC...AGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR GCA 90 bp GAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGGTACTCCAAGCTGTGCAGTaGTGTCAGGGTGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: EGALGHMALHRWHERLLVLQAVQ*CQGADR
Trigger: CCTGTCAGCACCCTGACAGCACTGCACAGCTTGGAG...TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATGGTCATGACCAGGCCTGGGGATGTCTaGTCCAAGCTGTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LVNVGPREAGSPGPMVMTRPGDV*SKLCSA
Trigger: AGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCT...GGTCATGACCATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR GCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACGGCACACTCTGTGCCTaGGTGGAGGCCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHGTLCA*VEARPM
Trigger: CATCGGCCTGGCCTCCACGCAGGCACAGAGTGTGCC...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAGACCGGCACACTCTGTaGCTGCGTGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTDRHTL*LRGGQA
Trigger: GGCCTGGCCTCCACGCAGGCACAGAGTGTGCCGGTC...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTGTCCTGAGAGTGATGAGCATAGTCTaGGGGAGCAGGCCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: PGPLRAQQVTATQACVLRVMSIV*GSRPVW
Trigger: CCACACGGGCCTGCTCCCGCAGACTATGCTCATCAC...TCTCAGGACACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGGTGATGAGCATAGTCTaGGGGAGCAGGCCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGVMSIV*GSRPVW
Trigger: CCACACGGGCCTGCTCCCGCAGACTATGCTCATCAC...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCAGGTGGTGGCCTGAGATaGCGGCGTGTGAAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSGGGLR*RRVKPG
Trigger: TCCGGGCTTCACACGCCGGCATCTCAGGCCACCACC...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGGTACAGCACCAGGCTaGTGGAGGACACTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PVGTLVTEQGHADPGPLRGTAPG*WRTLWG
Trigger: GCCCCACAGTGTCCTCCAGCAGCCTGGTGCTGTACC...TCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp ACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACGGTGGCTCTGGCCATTaGTGGAGTCTGAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TRTWTWHGLRGSHRSKDDGGSGH*WSLSSG
Trigger: ACCAGAGCTCAGACTCCAGCAATGGCCAGAGCCACC...GTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGAAGGGCCACGGTTaGTCGGCAGGCTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTRKGHG*SAGSGP
Trigger: AGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCT...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCAACAAGGGCAGGGTCTaGAGGGCGCTCGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGNKGRV*RALETE
Trigger: CTCTGTCTCGAGCGCCCTGCAGACCCTGCCCTTGTT...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGAGATGAAGGTCTCGATGACGCTGTGGTTGGATGGCAGCAGGTGGCTCTGGCCAACAAGGGCAGGGTCTaGAGGGCGCTCGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: GDEGLDDAVVGWQQVALANKGRV*RALETE
Trigger: CTCTGTCTCGAGCGCCCTGCAGACCCTGCCCTTGTT...GGCCAGAGCCACCTGCTGCCATCCAACCACAGCGTCATCGAGACCTTCATCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGCAGCTGCTCGGGCCTTaGTGCCTTGTGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGQLLGP*CLVSSA
Trigger: AGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTG...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCAGGGTGGCTGCGAACTaGCCTCAGCCAGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SSDSPSYICHEQALLLALRVAAN*PQPARP
Trigger: GGGCCTGGCTGGCTGAGGGCAGTTCGCAGCCACCCT...GAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTTGTCCCTCCTGGCAGTaGTCAGGACCTCAGACTCCT +
Preference number: 4 (lower is better)
Translates to: GAGRSGPVGTLVTEQGHACPSWQ*SGPQTP
Trigger: AGGAGTCTGAGGTCCTGAGCACTGCCAGGAGGGACA...AGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCACATGCAGACTGCAATaGCTGCCAGGCACCCCTTTC +
Preference number: 4 (lower is better)
Translates to: VAMKGLWVTWLCTGGMSGTCRLQ*LPGTPF
Trigger: GAAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGT...GCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp ACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAGGCTCAGAGACACATGCAGACTaGAATGCCTGCCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: TRVEAPVLVNVGPREAGSETHAD*NACQAP
Trigger: GGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTC...TGAGCCTGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp GGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGCAGCCCTCCCTGCCCTaGATGGGTGAACTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GCWLRPGDVCSKLCSAVRQPSLP*MGELAE
Trigger: TTCTGCAAGTTCACCCATGCAGGGCAGGGAGGGCTG...CCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CCA 90 bp CACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGGTAGGAGGGGTGCAGCGGCTCTTTGAGGATGGGTaGCGTGAAGTCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: HMALHRWHERLLVGGVQRLFEDG*REVFPI
Trigger: GATGGGGAAGACTTCACGCCACCCATCCTCAAAGAG...CCGCTGCACCCCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTATCCACCACGGCTTTCTaGTGGGCCGCCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVSTTAF*WAASSG
Trigger: CCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGTGGA...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACTCCACCACGGCTTTCTaGTGGGCCGCCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHSTTAF*WAASSG
Trigger: CCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGTGGA...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp GGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCACCACGGCTTTCTaGTGGGCCGCCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRPLQFQVRRLYPTKQRQSTTAF*WAASSG
Trigger: CCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGTGGA...CTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp ACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTGGGACAGGTGGGACTaGTTGAGGCCAGTGGTATCG +
Preference number: 4 (lower is better)
Translates to: TRTWTWHGLRGSHRSKDDWDRWD*LRPVVS
Trigger: CGATACCACTGGCCTCAACCAGTCCCACCTGTCCCA...GTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGAGGTGTTGGGACAGGTaGGACTGGTTGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GLLVEAWGCLLQAVQCCQRCWDR*DWLRPV
Trigger: CACTGGCCTCAACCAGTCCCACCTGTCCCAACACCT...CTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CCA 90 bp GCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCAGGTGTTGGGACAGGTaGGACTGGTTGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: ARFSAAGPGMWDHACPGFRCWDR*DWLRPV
Trigger: CACTGGCCTCAACCAGTCCCACCTGTCCCAACACCT...GAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACCCTCCCTGCCCTGCATaGGTGAACTGCTGCGCCACC +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHPPCPA*VNCCAT
Trigger: GGTGGCGCAGCAGTTCACCCATGCAGGGCAGGGAGG...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp TGGCTGGGCTCCAGGCCCGTGGGGGACACTTGGTGGAGGGGTGTAGACACTGTCGTAGCTCATCACCTGTaGGCTCTTCAATCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: WLGSRPVGDTWWRGVDTVVAHHL*ALQSAL
Trigger: GAGGGCTGATTGAAGAGCCCACAGGTGATGAGCTAC...GACAGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CCA 90 bp CCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCTGGGCTCCAGGCCCGTaGGGGACACTTGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PPPSVPSKKTVSHEAATVWAPGP*GTLGGG
Trigger: CCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCA...GACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp GCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATGCTGCTGAGACCAGCTTaGCTTCTGTACTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: APVLVNVGPREAGSPGPMLLRPA*LLYSAG
Trigger: GCCTGCTGAGTACAGAAGCCAAGCTGGTCTCAGCAG...CATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACCTGCTGAGACCAGCTTaGCTTCTGTACTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDLLRPA*LLYSAG
Trigger: GCCTGCTGAGTACAGAAGCCAAGCTGGTCTCAGCAG...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCAGGTTCTGGGGCTGCTaGTTGAGGCCTGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSRFWGC*LRPGDV
Trigger: GACATCCCCAGGCCTCAACCAGCAGCCCCAGAACCT...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TCCTGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAATGGCTCTGCACAGGTaGCATGAGCGGCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SWQCSGPQTPQGGCELPSMALHR*HERLLV
Trigger: TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCAT...TGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGGGGCTCTGGGTCACATaGCTCTGCACAGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: HPRPFPESQGRRGTLKARGLWVT*LCTGGM
Trigger: CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCC...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp ATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGGCTCTGGGTCACATaGCTCTGCACAGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: MVAMKGLWVTWLCTGGMSGLWVT*LCTGGM
Trigger: CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCC...GCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGCAGTCTCACTGGTCGCAGGCTGTCCATAGCGCACACCGTGGACCTTACTGGGGGGCTCTGGGTCACATaGCTCTGCACAGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: CSLTGRRLSIAHTVDLTGGLWVT*LCTGGM
Trigger: CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCC...CCCAGTAAGGTCCACGGTGTGCGCTATGGACAGCCTGCGACCAGTGAGACTGCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CCA 90 bp GCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGGCCATGAAGGGGCTCTaGGTCACATGGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: AMVAMKGLWVTWLCTGGMAMKGL*VTWLCT
Trigger: TGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGC...CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GTTCTGGGGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCGCCATGAAGGGGCTCTaGGTCACATGGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: VLGLLVEAWGCLLQAVQCAMKGL*VTWLCT
Trigger: TGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGC...GCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CCA 90 bp CATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGGAAGCCCGGACTCACTaGAGGCCTCAGTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: HGGHEGALGHMALHRWHEEARTH*RPQCLR
Trigger: CCTCAGACACTGAGGCCTCCAGTGAGTCCGGGCTTC...CTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp AAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCGGCTCTGGCCATTGCTaGAGTCTGAGCTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: KCGCQSGVAVPGLSIGPGGSGHC*SLSSGT
Trigger: TGTACCAGAGCTCAGACTCCAGCAATGGCCAGAGCC...GCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGCAGTCTCACTGGTCGCAGGCTGTCCATAGCGCACACCGTGGACCTTACTGGGGGCAGCAGGTGGCTCTaGCCATTGCTGGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: CSLTGRRLSIAHTVDLTGGSRWL*PLLESE
Trigger: CTCAGACTCCAGCAATGGCCAGAGCCACCTGCTGCC...CCCAGTAAGGTCCACGGTGTGCGCTATGGACAGCCTGCGACCAGTGAGACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CCA 90 bp TCCTGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGTCTCGATGACGCTGTaGTTGGATGGCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SWQCSGPQTPQGGCELPSVSMTL*LDGSRW
Trigger: CCACCTGCTGCCATCCAACCACAGCGTCATCGAGAC...TGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGGTCTCGATGACGCTGTaGTTGGATGGCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KARFSAAGPGMWDHACPGVSMTL*LDGSRW
Trigger: CCACCTGCTGCCATCCAACCACAGCGTCATCGAGAC...CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGGCCCAGGTGCCGTaGTTACTGGGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTRAQVP*LLGGRG
Trigger: GCCTCTTCCTCCCAGTAACCACGGCACCTGGGCCCT...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTTCCATAGGCCCAGGCTaGGGGTGCCCAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: HADPGPLRAQQVTATQACSIGPG*GCPSHR
Trigger: CCTATGACTTGGGCACCCCCAGCCTGGGCCTATGGA...ACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGCCGTAGCTCCTGTGCCCTaGGGTCACCTCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: WQCSGPQTPQGGCELPSAVAPVP*GHLFLL
Trigger: GAGAAGAAAGAGGTGACCCCAGGGCACAGGAGCTAC...GGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTTCAGACTCCTCAGGGTaGCTGCGAACTGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GCEAPTGVRTTSQPRSSLSDSSG*LRTALS
Trigger: GCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGA...AAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGTCAGACTCCTCAGGGTaGCTGCGAACTGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: APRLLSVSPVHTGSSCALSDSSG*LRTALS
Trigger: GCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGA...CAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GTGGAGATGAAGGTCTCGATGACGCTGTGGTTGGATGGCAGCAGGTGGCTCTGGGCAGGCCCAGGGATGTaGGACCATGCTTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VEMKVSMTLWLDGSRWLWAGPGM*DHACPG
Trigger: CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGC...CCAGAGCCACCTGCTGCCATCCAACCACAGCGTCATCGAGACCTTCATCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp AGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGCCACTCGCCCCGGCTaGCTACAAGCTGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SDSPSYICHEQALLLALHATRPG*LQAAGG
Trigger: ACCCCCTGCAGCTTGTAGCCAGCCGGGGCGAGTGGC...GTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
3UTR CAA 72 bp GTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTaGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VLSSRPRDVGPC*SWVHRLLCPSW
Trigger: CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
3UTR CAA 72 bp GCCTGGAACAGGATCTGCTGGGATGCTGGGCCCCACTaGAAACGGTTCCTCCGCCCCTTCTTGGTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: AWNRICWDAGPH*KRFLRPFLVGS
Trigger: GCTACCAACCAAGAAGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATCCCAGCAGATCCTGTTCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR TCA 90 bp TGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATATGGGAGTGCCCTTGTTaGGGTGTTGGGACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: CPEKCGCQSGVAVPGLSIWECPC*GVGTGG
Trigger: CCCACCTGTCCCAACACCTCAACAAGGGCACTCCCA...TATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp ATGGTCATGACCCCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGATGCTGGGCCCCACTTaGAACGGTTCCTCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: MVMTPGSEAMMRFWGCWLMLGPT*NGSSAP
Trigger: AGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCAT...CAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGGGGTCATGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000541924.5
CDS-3UTR TCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAGGGGCCCCCAGCTGCTaGGACCAGCTTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTGAPSC*DQLGFC
Trigger: ACAGAAGCCAAGCTGGTCTCAGCAGCTGGGGGCCCC...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR TCA 90 bp GCCAGGCACCCCTTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCGGGGCCCCCAGCTGCTaGGACCAGCTTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ARHPFPLHPLTANLYHHLGAPSC*DQLGFC
Trigger: ACAGAAGCCAAGCTGGTCTCAGCAGCTGGGGGCCCC...GAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAAGGGGTGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR TCA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCATCTGGGGCTGCTGGTTaGGGCCTGGGGATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSSGAAG*GLGMSA
Trigger: AGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGA...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGGTACATGACCCCAGGAAGTaGGGCCATGATGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: EGALGHMALHRWHERLLVHDPRK*GHDEVL
Trigger: CAGAACCTCATCATGGCCTCACTTCCTGGGGTCATG...TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGCATGACCCCAGGAAGTaGGGCCATGATGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GCWLRPGDVCSKLCSAVRHDPRK*GHDEVL
Trigger: CAGAACCTCATCATGGCCTCACTTCCTGGGGTCATG...CCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR TCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACTCTGCACAGGTGGCATaGGCGGCTGCTGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHSAQVA*AAAGRR
Trigger: CCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGA...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR TCA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCATCTGCACAGGTGGCATaGGCGGCTGCTGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSSAQVA*AAAGRR
Trigger: CCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGA...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTATCTGCACAGGTGGCATaGGCGGCTGCTGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVSAQVA*AAAGRR
Trigger: CCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGA...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACTGGGGGCTCTGCAGCTaGGCCATGGTGGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHWGLCS*AMVAMK
Trigger: CTTCATGGCCACCATGGCTCAGCTGCAGAGCCCCCA...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR TCA 90 bp TGCTGGGATGCTGGGCCCCACTTGAAACGGTTCCTCCGCCCCTTCTTGGTTGGTGCCATTGCTGGAGTCTaGGCTCTGGTACAGCACCAG +
Preference number: 4 (lower is better)
Translates to: CWDAGPHLKRFLRPFLVGAIAGV*ALVQHQ
Trigger: CTGGTGCTGTACCAGAGCTCAGACTCCAGCAATGGC...ACCAACCAAGAAGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR TCA 90 bp GGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCCTCCTACATCTGCCATaGACAGGCTTTGCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: GHADPGPLRAQQVTATQALLHLP*TGFAPS
Trigger: GCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAG...GGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GGTGGAGATGAAGGTCTCGATGACGCTGTGGTTGGATGGCAGCAGGTGGCTCTGCACAGGCCTGTGTCCTaGGAAGTGTGGCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GGDEGLDDAVVGWQQVALHRPVS*EVWLPE
Trigger: CTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTG...CAGAGCCACCTGCTGCCATCCAACCACAGCGTCATCGAGACCTTCATCTCCACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR TCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCCGGTGGGTACATTGGTaGCAGAACAAGGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: GHPRPFPESQGRRGTLKARWVHW*QNKATL
Trigger: CAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCG...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGTGGAGATGAAGGTCTCGATGACGCTGTGGTTGGATGGCAGCAGGTGGCTCTGTGGGTTGCGTTTGCCTaGCGGCCGGCAGACACAAAC +
Preference number: 4 (lower is better)
Translates to: GGDEGLDDAVVGWQQVALWVAFA*RPADTN
Trigger: GTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCA...CAGAGCCACCTGCTGCCATCCAACCACAGCGTCATCGAGACCTTCATCTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560968.5
CDS-3UTR GCA 90 bp GACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATCCCCACCGCGTGGGTTaGGTTTGCCTGCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: DTLNHGNTLVPETHADCNPHRVG*VCLPAG
Trigger: GCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGG...ATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp ACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACGCCAGGAGCTCCGTCTaGAGCTGGCTCAGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: TRTWTWHGLRGSHRSKDDARSSV*SWLSLE
Trigger: TTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGC...GTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATACCCCGGCTCACCCAGTaGCTGGATCAGTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: CPEKCGCQSGVAVPGLSIPRLTQ*LDQCLF
Trigger: AAAGAGGCACTGATCCAGGCACTGGGTGAGCCGGGG...TATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGCATGGGTGAACTGCTaGGCCACCTCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPAWVNC*ATSRCL
Trigger: CAAGCAGCGAGAGGTGGCGCAGCAGTTCACCCATGC...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACCAGCCCTCCCTGCCCTaGATGGGTGAACTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHQPSLP*MGELLR
Trigger: GCGCAGCAGTTCACCCATGCAGGGCAGGGAGGGCTG...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTCAATCAGCCCTCCCTaGCCTGCATGGGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: HPRPFPESQGRRGTLKARSISPP*PAWVNC
Trigger: GCAGTTCACCCATGCAGGGCAGGGAGGGCTGATTGA...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGTCAATCAGCCCTCCCTaGCCTGCATGGGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: APRLLSVSPVHTGSSCALSISPP*PAWVNC
Trigger: GCAGTTCACCCATGCAGGGCAGGGAGGGCTGATTGA...CAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACGCCTGGAACAGGATCTaGTGGGATGCTGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHAWNRI*WDAGPH
Trigger: GTGGGGCCCAGCATCCCAGCAGATCCTGTTCCAGGC...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACACACCCCTCTCTGGATaGATTCCGCCCTATTGCACT +
Preference number: 4 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDTPLSG*IPPYCT
Trigger: AGTGCAATAGGGCGGAATGCATCCAGAGAGGGGTGT...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGGTGAGGCCTGGGGATGTCTaGTCCAAGCTGTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: CWLRPGDVCSKLCSAVRVRPGDV*SKLCSA
Trigger: AGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCT...CACCCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR GCA 90 bp CACCCCTTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGGACCGGCACACTCTGTaGCTGCGTGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HPFPLHPLTANLYHHLLLDRHTL*LRGGQA
Trigger: GGCCTGGCCTCCACGCAGGCACAGAGTGTGCCGGTC...CAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp CCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTGTCCTGAGATCTGAGGTGAAGACCTaGTTGGTGGGCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGPLRAQQVTATQACVLRSEVKT*LVGVRL
Trigger: CAGCCTCACGCCCACCAAGCAGGTCTTCACCTCAGA...TCTCAGGACACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp CCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTGTCCTGAGAGGTGGCTCTGGCCATTaGTGGAGTCTGAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGPLRAQQVTATQACVLRGGSGH*WSLSSG
Trigger: ACCAGAGCTCAGACTCCAGCAATGGCCAGAGCCACC...TCTCAGGACACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGAGGAAGGGCCACGGTTaGTCGGCAGGCTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GTLVTEQGHADPGPLRAQRKGHG*SAGSGP
Trigger: AGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCT...CTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCTGAGAAGTGTGGCTaGCAGAGTGGTGTAGCGGTC +
Preference number: 4 (lower is better)
Translates to: GCEAPTGVRTTSQPRSSLPEKCG*QSGVAV
Trigger: GACCGCTACACCACTCTGGCAGCCACACTTCTCAGG...AAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCAAGCCAGGAGAGCCCTaGCTGCCTTCCCTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: PESQGRRGTLKARFSAAGKPGEP*LPSLLA
Trigger: AGCTAACAGGGAAGGCAGGCAGGGCTCTCCTGGCTT...GCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTCTGCTCGGGCCTTGCTaGCTTGTGAGCTCAGCTACT +
Preference number: 4 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSLLGPC*LVSSAT
Trigger: AGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAG...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCTGTCCCTCCTGGCAGTaGTCAGGACCTCAGACTCCT +
Preference number: 4 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSCPSWQ*SGPQTP
Trigger: AGGAGTCTGAGGTCCTGAGCACTGCCAGGAGGGACA...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTAGGGATGTGGGACCATaGTTGTCCTGGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: GQVLSSRPRDVGPCLSWVRDVGP*LSWVHR
Trigger: CCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT...AACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTAGGGATGTGGGACCATaGTTGTCCTGGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTRDVGP*LSWVHR
Trigger: CCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCACAAGCTGCAGGGGGTaGCGGGTCACCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PPPSVPSKKTVSHEAATVTSCRG*RVTPGL
Trigger: AAGGCCTGGGGTGACCCGGCACCCCCTGCAGCTTGT...GACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCCTCCCCCACCGCGTaGGTTGCGTTTGCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: FPLHPLTANLYHHLLLCGASPTA*VAFACR
Trigger: CCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGC...CCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp AGCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGGCTCACCCAGTGCCTaGATCAGTGCCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SHGGHEGALGHMALHRWHGSPSA*ISASLL
Trigger: GAGCAAAGAGGCACTGATCCAGGCACTGGGTGAGCC...ATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACTCTCCCCCAGCCCATTaGGCAGCTCAGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHSPPAH*AAQPAP
Trigger: GGGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGA...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACACCACGGCTTTCTGGTaGGCCGCCTCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHTTAFW*AASSGL
Trigger: CAGCCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGT...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp CATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGTGGGACAGGTGGGACTaGTTGAGGCCAGTGGTATCG +
Preference number: 4 (lower is better)
Translates to: HGGHEGALGHMALHRWHEWDRWD*LRPVVS
Trigger: CGATACCACTGGCCTCAACCAGTCCCACCTGTCCCA...CTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTTGGGACAGGTGGGACTaGTTGAGGCCAGTGGTATCG +
Preference number: 4 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSWDRWD*LRPVVS
Trigger: CGATACCACTGGCCTCAACCAGTCCCACCTGTCCCA...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGAGGTGTTGGGACAGGTaGGACTGGTTGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: HGGHEGALGHMALHRWHERCWDR*DWLRPV
Trigger: CACTGGCCTCAACCAGTCCCACCTGTCCCAACACCT...CTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACCCTCCCTGCCCTGCATaGGTGAACTGCTGCGCCACC +
Preference number: 4 (lower is better)
Translates to: SDSPSYICHEQALLLALHPPCPA*VNCCAT
Trigger: GGTGGCGCAGCAGTTCACCCATGCAGGGCAGGGAGG...GTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTGTGTAGCTCATCACCTGTaGGCTCTTCAATCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: WWPEMPACEARTHWRPQCVAHHL*ALQSAL
Trigger: GAGGGCTGATTGAAGAGCCCACAGGTGATGAGCTAC...ACACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp ACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTCCTCCGCCCCTTCTTaGTTGGTAGCTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: TRTWTWHGLRGSHRSKDDSSAPS*LVAHHL
Trigger: CAGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGA...GTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTCCTCCGCCCCTTCTTaGTTGGTAGCTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: KARFSAAGPGMWDHACPGSSAPS*LVAHHL
Trigger: CAGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGA...CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTGTCGGGGACACCCCTCTCTaGATGCATTCCGCCCTATTG +
Preference number: 4 (lower is better)
Translates to: ADPGPLRAQQVTATQACVGDTPL*MHSALL
Trigger: CAATAGGGCGGAATGCATCCAGAGAGGGGTGTCCCC...GACACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGACGCTGTACGTGTCCATaGCCAGCTTGTGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PVGTLVTEQGHADPGPLRRCTCP*PACAGR
Trigger: CCTTCCGGCACAAGCTGGCCATGGACACGTACAGCG...TCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp TGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATACCCGTGGGGGACACTTaGTGGAGGGGTGTAGACACT +
Preference number: 4 (lower is better)
Translates to: CPEKCGCQSGVAVPGLSIPVGDT*WRGVDT
Trigger: AGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGG...TATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp TCCTGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCACTGCTGAGACCAGCTTaGCTTCTGTACTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SWQCSGPQTPQGGCELPSLLRPA*LLYSAG
Trigger: GCCTGCTGAGTACAGAAGCCAAGCTGGTCTCAGCAG...TGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTGTCCTGAGAGCCATGATGAGGTTCTaGGGCTGCTGGTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGPLRAQQVTATQACVLRAMMRF*GCWLRP
Trigger: AGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGC...TCTCAGGACACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp ATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGCCATGATGAGGTTCTaGGGCTGCTGGTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: MVAMKGLWVTWLCTGGMSAMMRF*GCWLRP
Trigger: AGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGC...GCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGGCCATGATGAGGTTCTaGGGCTGCTGGTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HPRPFPESQGRRGTLKARAMMRF*GCWLRP
Trigger: AGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGC...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATATGGCTCTGCACAGGTaGCATGAGCGGCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SHGGHEGALGHMALHRWHMALHR*HERLLV
Trigger: TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCAT...ATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAGGGCTCTGGGTCACATaGCTCTGCACAGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTGLWVT*LCTGGM
Trigger: CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCC...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCGCCATGAAGGGGCTCTaGGTCACATGGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSAMKGL*VTWLCT
Trigger: TGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGC...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAACCCGTGTGGGTGTACTaGGCCACCTCGGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GVSTNGMWVTSWKELGQEPVWVY*ATSGLW
Trigger: CCACAAGCCCGAGGTGGCCCAGTACACCCACACGGG...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAGGACGTGGAGGGTGGTaGCCTGAGATGCCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: GVSTNGMWVTSWKELGQEGRGGW*PEMPAC
Trigger: ACACGCCGGCATCTCAGGCCACCACCCTCCACGTCC...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCATGCTGGCAGGGTCCTaGCTGGGGACGTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PPPSVPSKKTVSHEAATVMLAGS*LGTWRV
Trigger: CACCCTCCACGTCCCCAGCCAGGACCCTGCCAGCAT...GACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAATGCTGGCAGGGTCCTaGCTGGGGACGTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GVSTNGMWVTSWKELGQEMLAGS*LGTWRV
Trigger: CACCCTCCACGTCCCCAGCCAGGACCCTGCCAGCAT...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGGCCGGCTGCAGGTGCTaGATGCTGGCAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CIPRSSDSPSYICHEQALAGCRC*MLAGSW
Trigger: CCAGGACCCTGCCAGCATCCAGCACCTGCAGCCGGC...CAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGAGATGAAGGTCTCGATGACGCTGTGGTTGGATGGCAGCAGGTGGCTCTGGCCCTGGAGTCTGAGCTCTaGTACAGCACCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GDEGLDDAVVGWQQVALALESEL*YSTRLL
Trigger: CAGCAGCCTGGTGCTGTACCAGAGCTCAGACTCCAG...GGCCAGAGCCACCTGCTGCCATCCAACCACAGCGTCATCGAGACCTTCATCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CCA 90 bp AGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGGGCAGCAGGTGGCTCTaGCCATTGCTGGAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RDVGPCLSWVHRLLCPSWGSRWL*PLLESE
Trigger: CTCAGACTCCAGCAATGGCCAGAGCCACCTGCTGCC...CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGAGGTGCCGTGGTTACTaGGAGGAAGAGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGRCRGY*EEEAIW
Trigger: CCAGATGGCCTCTTCCTCCCAGTAACCACGGCACCT...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGAGGTGCCGTGGTTACTaGGAGGAAGAGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: HPRPFPESQGRRGTLKARRCRGY*EEEAIW
Trigger: CCAGATGGCCTCTTCCTCCCAGTAACCACGGCACCT...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAAGGGCCCAGGTGCCGTaGTTACTGGGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVRAQVP*LLGGRG
Trigger: GCCTCTTCCTCCCAGTAACCACGGCACCTGGGCCCT...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCAAGGGCCCAGGTGCCGTaGTTACTGGGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSRAQVP*LLGGRG
Trigger: GCCTCTTCCTCCCAGTAACCACGGCACCTGGGCCCT...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp ACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCCTATGTGGGTCACTAGCTaGAAGGAGTTGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TSQPRSSLPSRGRRPGWPMWVTS*KELGQE
Trigger: TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACAT...AGGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTGGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCATGTGGGTCACTAGCTaGAAGGAGTTGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: KCGCQSGVAVPGLSIGPGMWVTS*KELGQE
Trigger: TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACAT...GCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCGGAGGTCATGGGGCCTaGGAGAGGGAATCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSDSPSYICHEQALLLALGGHGA*ERESLG
Trigger: CCCCAGCGATTCCCTCTCCCAGGCCCCATGACCTCC...GAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
3UTR CAA 72 bp AGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGACCCCCTCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: SDSPSYICHEQA*LLALHDPLLCT
Trigger: GGTGCACAGGAGGGGGTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000543427.5
ENST00000560968.5
ENST00000615446.4
ENST00000617366.4
CDS-3UTR TCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACGCTGCAGGTAGGACTTaGCCATCTTCGCCACACGCC +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHAAGRT*PSSPHA
Trigger: GGCGTGTGGCGAAGATGGTCAAGTCCTACCTGCAGC...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR TCA 90 bp CCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAACAGGTGGGACTGGTTaGGGCCAGTGGTATCGACCA +
Preference number: 4 (lower is better)
Translates to: PVGTLVTEQGHADPGPLRTGGTG*GQWYRP
Trigger: TGGTCGATACCACTGGCCTCAACCAGTCCCACCTGT...TCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp ATGGTCATGACCCCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGTGGGAGTGCCCTTGTTaGGGTGTTGGGACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: MVMTPGSEAMMRFWGCWLWECPC*GVGTGG
Trigger: CCCACCTGTCCCAACACCTCAACAAGGGCACTCCCA...CAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGGGGTCATGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR TCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAATGCTGGGCCCCACTTaGAACGGTTCCTCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTMLGPT*NGSSAP
Trigger: AGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCAT...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR TCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACGGGACCGCCGCTGCTTaGGGGTACTTCTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHGTAAA*GYFCSL
Trigger: GAGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCC...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR TCA 90 bp CATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGCGGGACCGCCGCTGCTTaGGGGTACTTCTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: HPLTANLYHHLLLCGAQGGTAAA*GYFCSL
Trigger: GAGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCC...GCCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR TCA 90 bp AGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCGGGACCGCCGCTGCTTaGGGGTACTTCTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSDSPSYICHEQALLLALGTAAA*GYFCSL
Trigger: GAGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCC...GAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR TCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTGGGGCCCCCAGCTGCTaGGACCAGCTTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGGAPSC*DQLGFC
Trigger: ACAGAAGCCAAGCTGGTCTCAGCAGCTGGGGGCCCC...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp AGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCTCTGGGGCTGCTGGTTaGGGCCTGGGGATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSDSPSYICHEQALLLALSGAAG*GLGMSA
Trigger: AGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGA...GAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACATCTGGGGCTGCTGGTTaGGGCCTGGGGATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTSGAAG*GLGMSA
Trigger: AGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGA...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR TCA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCATGACCCCAGGAAGTaGGGCCATGATGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSHDPRK*GHDEVL
Trigger: CAGAACCTCATCATGGCCTCACTTCCTGGGGTCATG...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GCCAGGCACCCCTTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCTCTGCACAGGTGGCATaGGCGGCTGCTGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: ARHPFPLHPLTANLYHHLSAQVA*AAAGRR
Trigger: CCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGA...GAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAAGGGGTGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR TCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCCCCAGGCTTCTaGGTGTTAGTCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTRPPGF*VLVLST
Trigger: TGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCT...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GTGGAGATGAAGGTCTCGATGACGCTGTGGTTGGATGGCAGCAGGTGGCTCTGGGTAGACGCGGTACACTaGAGGCCAGGTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VEMKVSMTLWLDGSRWLWVDAVH*RPGSQQ
Trigger: CTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTAC...CCAGAGCCACCTGCTGCCATCCAACCACAGCGTCATCGAGACCTTCATCTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp CCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTCGCGTGGGTTGCGTTTaGCTGCCGGCCGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: PSITETHLSQRHMQTAMPRVGCV*LPAGRH
Trigger: GTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCG...AGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTGCCAGGAGCTCCGTCTaGAGCTGGCTCAGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSARSSV*SWLSLE
Trigger: TTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGC...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGAGGCCTGGGGATGGATCAGTGCCTCTTTaGTCAGCCCTGACTCGAGCA +
Preference number: 4 (lower is better)
Translates to: PGSEAMMRFWGCWLRPGDGSVPL*SALTRA
Trigger: TGCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCC...ATCCCCAGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR GCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACCCCCGGCTCACCCAGTaGCTGGATCAGTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHPRLTQ*LDQCLF
Trigger: AAAGAGGCACTGATCCAGGCACTGGGTGAGCCGGGG...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp ACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCAGGCACCCCTTTCCCCCCGGCTCACCCAGTaGCTGGATCAGTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TLVPETHADCNACQAPLSPRLTQ*LDQCLF
Trigger: AAAGAGGCACTGATCCAGGCACTGGGTGAGCCGGGG...GGAAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp CCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCTGCGCCACCTCTCGCTaGTTGCGGACGTACCAGGTG +
Preference number: 4 (lower is better)
Translates to: PPPSVPSKKTVSHEAATVCATSR*LRTYQV
Trigger: CACCTGGTACGTCCGCAAGCAGCGAGAGGTGGCGCA...GACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACTGCGCCACCTCTCGCTaGTTGCGGACGTACCAGGTG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHCATSR*LRTYQV
Trigger: CACCTGGTACGTCCGCAAGCAGCGAGAGGTGGCGCA...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp GGTGATGGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGTGCGCCACCTCTCGCTaGTTGCGGACGTACCAGGTG +
Preference number: 4 (lower is better)
Translates to: GDGVSTNGMWVTSWKELGCATSR*LRTYQV
Trigger: CACCTGGTACGTCCGCAAGCAGCGAGAGGTGGCGCA...CCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCCATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCCAGCCCTCCCTGCCCTaGATGGGTGAACTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ADTLNHGNTLVPETHADCQPSLP*MGELLR
Trigger: GCGCAGCAGTTCACCCATGCAGGGCAGGGAGGGCTG...GCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS-3UTR GCA 90 bp GTCATGACCCCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGAGGTCAATCAGCCCTCCCTaGCCTGCATGGGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: VMTPGSEAMMRFWGCWLRSISPP*PAWVNC
Trigger: GCAGTTCACCCATGCAGGGCAGGGAGGGCTGATTGA...CCTCAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGGGGTCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS-3UTR GCA 90 bp TTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATGGTCATGACCTGCATTCCGCCCTATTaGACTCCTCCACTAGCGTCT +
Preference number: 4 (lower is better)
Translates to: LVNVGPREAGSPGPMVMTCIPPY*TPPLAS
Trigger: AGACGCTAGTGGAGGAGTGCAATAGGGCGGAATGCA...GGTCATGACCATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR GCA 90 bp GCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGGGAAGGCTTCTTCTTTaGGCCGGTTGGCAAACCAGT +
Preference number: 4 (lower is better)
Translates to: AMVAMKGLWVTWLCTGGMGRLLL*AGWQTS
Trigger: ACTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCC...CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000540108.1
CDS-3UTR GCA 90 bp GAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGGTATCCATGGCCAGCTTGTaGCGGAAGGCTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: EGALGHMALHRWHERLLVSMASL*RKASSL
Trigger: CAAAGAAGAAGCCTTCCGGCACAAGCTGGCCATGGA...TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000540108.1
CDS-3UTR GCA 90 bp AGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCTCCAAGCTGTGCAGTaGTGTCAGGGTGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: RDVGPCLSWVHRLLCPSWLQAVQ*CQGADR
Trigger: CCTGTCAGCACCCTGACAGCACTGCACAGCTTGGAG...CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAAGGCCTGGGGATGTCTaGTCCAAGCTGTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RFSAAGPGMWDHACPGFTRPGDV*SKLCSA
Trigger: AGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCT...TGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGACCGGCACACTCTGTaGCTGCGTGGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSITETHLSQRHMQTAMPDRHTL*LRGGQA
Trigger: GGCCTGGCCTCCACGCAGGCACAGAGTGTGCCGGTC...AGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp CCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGGTGGCTCTGGCCATTaGTGGAGTCTGAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PVGTLVTEQGHADPGPLRGGSGH*WSLSSG
Trigger: ACCAGAGCTCAGACTCCAGCAATGGCCAGAGCCACC...TCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCAGTCCCTCCTACATCTaGCATGAACAGGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GHADPGPLRAQQVTATQASPSYI*HEQALL
Trigger: GAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACT...GGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGAGTCCCTCCTACATCTaGCATGAACAGGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKSPSYI*HEQALL
Trigger: GAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACT...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATACTGCTCGGGCCTTGCTaGCTTGTGAGCTCAGCTACT +
Preference number: 4 (lower is better)
Translates to: CPEKCGCQSGVAVPGLSILLGPC*LVSSAT
Trigger: AGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAG...TATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGCTGCTCGGGCCTTaGTGCCTTGTGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GTLVTEQGHADPGPLRAQQLLGP*CLVSSA
Trigger: AGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTG...CTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTGTCCTGAGAAGGGATGTGGGACCATaGTTGTCCTGGGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: PGPLRAQQVTATQACVLRRDVGP*LSWVHR
Trigger: CCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT...TCTCAGGACACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACGCAGACTGCAATGCCTaGCAGGCACCCCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHADCNA*QAPLSP
Trigger: AGGGGAAAGGGGTGCCTGGCAGGCATTGCAGTCTGC...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp TTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATGGTCATGACCTGTCCCAGAGACACATaGAGACTGCAATGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LVNVGPREAGSPGPMVMTCPRDT*RLQCLP
Trigger: TGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACA...GGTCATGACCATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp GAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGGTATGTCCCAGAGACACATaGAGACTGCAATGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: EGALGHMALHRWHERLLVCPRDT*RLQCLP
Trigger: TGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACA...TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp GGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAGGCTCACCCAGTGCCTaGATCAGTGCCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GCGTMLVLGSQAPLSLLAGSPSA*ISASLL
Trigger: GAGCAAAGAGGCACTGATCCAGGCACTGGGTGAGCC...TGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTACCACGGCTTTCTGGTaGGCCGCCTCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGTTAFW*AASSGL
Trigger: CAGCCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGT...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGAGGTGTTGGGACAGGTaGGACTGGTTGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RDVGPCLSWVHRLLCPSWRCWDR*DWLRPV
Trigger: CACTGGCCTCAACCAGTCCCACCTGTCCCAACACCT...CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACCGCTGTACGTGTCCATaGCCAGCTTGTGCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHRCTCP*PACAGR
Trigger: CCTTCCGGCACAAGCTGGCCATGGACACGTACAGCG...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACCACCGTGGACCTTACTaGGGGAGAGGGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHHRGPY*GRGQVE
Trigger: CTCCACCTGCCCTCTCCCCCAGTAAGGTCCACGGTG...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp CTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCTGGGCTCCAGGCCCGTaGGGGACACTTGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LNHGNTLVPETHADCNACWAPGP*GTLGGG
Trigger: CCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCA...GCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CCA 90 bp ATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCCTGCTGAGACCAGCTTaGCTTCTGTACTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: MVAMKGLWVTWLCTGGMSLLRPA*LLYSAG
Trigger: GCCTGCTGAGTACAGAAGCCAAGCTGGTCTCAGCAG...GCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAGGTTCTGGGGCTGCTaGTTGAGGCCTGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHRFWGC*LRPGDV
Trigger: GACATCCCCAGGCCTCAACCAGCAGCCCCAGAACCT...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTATGGCTCTGCACAGGTaGCATGAGCGGCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPMALHR*HERLLV
Trigger: TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCAT...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACGGGCTCTGGGTCACATaGCTCTGCACAGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHGLWVT*LCTGGM
Trigger: CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCC...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp GGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGGAAGCCCGGACTCACTaGAGGCCTCAGTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GTLVTEQGHADPGPLRAQEARTH*RPQCLR
Trigger: CCTCAGACACTGAGGCCTCCAGTGAGTCCGGGCTTC...CTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGATGCTGGCAGGGTCCTaGCTGGGGACGTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: CIPRSSDSPSYICHEQALMLAGS*LGTWRV
Trigger: CACCCTCCACGTCCCCAGCCAGGACCCTGCCAGCAT...CAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTGCAGGTGCTGGATGCTaGCAGGGTCCTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGAGAGC*QGPGWG
Trigger: TCCCCAGCCAGGACCCTGCCAGCATCCAGCACCTGC...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACACTGGAGTCTGAGCTCTaGTACAGCACCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTLESEL*YSTRLL
Trigger: CAGCAGCCTGGTGCTGTACCAGAGCTCAGACTCCAG...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCGGCTCTGGCCATTGCTaGAGTCTGAGCTCTGGTACA +
Preference number: 4 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGGSGHC*SLSSGT
Trigger: TGTACCAGAGCTCAGACTCCAGCAATGGCCAGAGCC...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCGACGCTGTGGTTGGATaGCAGCAGGTGGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SSDSPSYICHEQALLLALDAVVG*QQVALA
Trigger: GGCCAGAGCCACCTGCTGCCATCCAACCACAGCGTC...GAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGTGTGGCTGCCAGAGTaGTGTAGCGGTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SDSPSYICHEQALLLALHVWLPE*CSGPRA
Trigger: AGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC...GTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACTGCCCCACCAGGACCTaGACTTGGCACGGGTTGCGA +
Preference number: 4 (lower is better)
Translates to: SDSPSYICHEQALLLALHCPTRT*TWHGLR
Trigger: TCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCA...GTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCGTAGCTCCTGTGCCCTaGGGTCACCTCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGVAPVP*GHLFLL
Trigger: GAGAAGAAAGAGGTGACCCCAGGGCACAGGAGCTAC...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACTCATCTCCTGCTGTGTaGGGCACAGGGCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHSSPAV*GTGRSP
Trigger: CGGTGAGCGCCCTGTGCCCCACACAGCAGGAGATGA...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp GCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGTCATCTCCTGCTGTGTaGGGCACAGGGCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: ASIDSQPLSSSPAVWGTGSSPAV*GTGRSP
Trigger: CGGTGAGCGCCCTGTGCCCCACACAGCAGGAGATGA...CCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp GCCAGGCACCCCTTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCTCATCTCCTGCTGTGTaGGGCACAGGGCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: ARHPFPLHPLTANLYHHLSSPAV*GTGRSP
Trigger: CGGTGAGCGCCCTGTGCCCCACACAGCAGGAGATGA...GAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAAGGGGTGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGAGGGCCAGCAGGCCTaGACCTTACCTGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATEGQQA*TLPAWW
Trigger: CCACCAAGCAGGTAAGGTCCAGGCCTGCTGGCCCTC...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541395.5
CDS-3UTR TCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACAGGTGGGACTGGTTaGGGCCAGTGGTATCGACCA +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHTGGTG*GQWYRP
Trigger: TGGTCGATACCACTGGCCTCAACCAGTCCCACCTGT...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR TCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACATGGGAGTGCCCTTGTTaGGGTGTTGGGACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTWECPC*GVGTGG
Trigger: CCCACCTGTCCCAACACCTCAACAAGGGCACTCCCA...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR TCA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACATGGGAGTGCCCTTGTTaGGGTGTTGGGACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATWECPC*GVGTGG
Trigger: CCCACCTGTCCCAACACCTCAACAAGGGCACTCCCA...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp TGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGGGGACCGCCGCTGCTTaGGGGTACTTCTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: CIPRSSDSPSYICHEQALGTAAA*GYFCSL
Trigger: GAGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCC...CAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR TCA 90 bp CCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTTCTGCACAGGTGGCATaGGCGGCTGCTGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PPSVPSKKTVSHEAATVPSAQVA*AAAGRR
Trigger: CCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGA...AGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAACCTCAGTGTCTGAGGTaGAGACCTGCTTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: GVSTNGMWVTSWKELGQEPQCLR*RPAWWA
Trigger: CGCCCACCAAGCAGGTCTTCACCTCAGACACTGAGG...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000560968.5
CDS-3UTR TCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGGAGGCCTCAGTGTCTaGGGTGAAGACCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVGGLSV*GEDLLG
Trigger: ACCAAGCAGGTCTTCACCTCAGACACTGAGGCCTCC...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000560968.5
CDS-3UTR TCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCCATTGCTGGAGTCTaGGCTCTGGTACAGCACCAG +
Preference number: 4 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVAIAGV*ALVQHQ
Trigger: CTGGTGCTGTACCAGAGCTCAGACTCCAGCAATGGC...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTAGAGCCCTCCCTTTCTaGTGCATCAGAGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPRALPF*CIRAEW
Trigger: CCACTCTGCTCTGATGCATCAGAAAGGGAGGGCTCT...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAAGAGCCCTCCCTTTCTaGTGCATCAGAGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PVGTLVTEQGHADPGPLRRALPF*CIRAEW
Trigger: CCACTCTGCTCTGATGCATCAGAAAGGGAGGGCTCT...TCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp TGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAAGAGCCCTCCCTTTCTaGTGCATCAGAGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: CPEKCGCQSGVAVPGLSIRALPF*CIRAEW
Trigger: CCACTCTGCTCTGATGCATCAGAAAGGGAGGGCTCT...TATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGGCCTGTGTGAGTAGGTaGTGGGGTCAGTACAAATGG +
Preference number: 4 (lower is better)
Translates to: HPRPFPESQGRRGTLKARACVSR*WGQYKW
Trigger: CCATTTGTACTGACCCCATCACCTACTCACACAGGC...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTGTCCTGAGAGCCTGTGTGAGTAGGTaGTGGGGTCAGTACAAATGG +
Preference number: 4 (lower is better)
Translates to: PGPLRAQQVTATQACVLRACVSR*WGQYKW
Trigger: CCATTTGTACTGACCCCATCACCTACTCACACAGGC...TCTCAGGACACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTCTGGCCTCAGAGGCATaGTGCTCTTGGGAACAAATA +
Preference number: 4 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTLASEA*CSWEQI
Trigger: TATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAG...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACTGGGTTGCGTTTGCCTaGCGGCCGGCAGACACAAAC +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHWVAFA*RPADTN
Trigger: GTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCA...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp AGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGATCAGTGCCTCTTTaGTCAGCCCTGACTCGAGCA +
Preference number: 4 (lower is better)
Translates to: RFSAAGPGMWDHACPGFTGSVPL*SALTRA
Trigger: TGCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCC...TGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGCCCCGGCTCACCCAGTaGCTGGATCAGTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: ASIDSQPLSSSPAVWGTGPRLTQ*LDQCLF
Trigger: AAAGAGGCACTGATCCAGGCACTGGGTGAGCCGGGG...CCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACGCATGGGTGAACTGCTaGGCCACCTCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHAWVNC*ATSRCL
Trigger: CAAGCAGCGAGAGGTGGCGCAGCAGTTCACCCATGC...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGCGCATGGGTGAACTGCTaGGCCACCTCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HPLTANLYHHLLLCGAQGAWVNC*ATSRCL
Trigger: CAAGCAGCGAGAGGTGGCGCAGCAGTTCACCCATGC...GCCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS-3UTR GCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACTCAATCAGCCCTCCCTaGCCTGCATGGGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHSISPP*PAWVNC
Trigger: GCAGTTCACCCATGCAGGGCAGGGAGGGCTGATTGA...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTTGCATTCCGCCCTATTaGACTCCTCCACTAGCGTCT +
Preference number: 4 (lower is better)
Translates to: HADPGPLRAQQVTATQACCIPPY*TPPLAS
Trigger: AGACGCTAGTGGAGGAGTGCAATAGGGCGGAATGCA...ACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTTGCATTCCGCCCTATTaGACTCCTCCACTAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GCEAPTGVRTTSQPRSSLCIPPY*TPPLAS
Trigger: AGACGCTAGTGGAGGAGTGCAATAGGGCGGAATGCA...AAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCACACCCCTCTCTGGATaGATTCCGCCCTATTGCACT +
Preference number: 4 (lower is better)
Translates to: GHPRPFPESQGRRGTLKATPLSG*IPPYCT
Trigger: AGTGCAATAGGGCGGAATGCATCCAGAGAGGGGTGT...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGTCCATGGCCAGCTTGTaGCGGAAGGCTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: APRLLSVSPVHTGSSCALSMASL*RKASSL
Trigger: CAAAGAAGAAGCCTTCCGGCACAAGCTGGCCATGGA...CAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR GCA 90 bp GGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGCTAAGGGACCGCCGCTaGTTGAGGGTACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GRPLQFQVRRLYPTKQRQLRDRR*LRVLLQ
Trigger: CTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCTTAG...CTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR GCA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCACTAAGGGACCGCCGCTaGTTGAGGGTACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSLRDRR*LRVLLQ
Trigger: CTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCTTAG...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR GCA 90 bp ACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCAGGCACCCCTTTCCCTAAGGGACCGCCGCTaGTTGAGGGTACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TLVPETHADCNACQAPLSLRDRR*LRVLLQ
Trigger: CTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCTTAG...GGAAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp GGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCTCCAAGCTGTGCAGTaGTGTCAGGGTGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: GTLVTEQGHADPGPLRAQLQAVQ*CQGADR
Trigger: CCTGTCAGCACCCTGACAGCACTGCACAGCTTGGAG...CTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAGGCCTGGGGATGTCTaGTCCAAGCTGTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHRPGDV*SKLCSA
Trigger: AGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCT...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAGGCACACTCTGTGCCTaGGTGGAGGCCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: QTPSITETHLSQRHMQTAGTLCA*VEARPM
Trigger: CATCGGCCTGGCCTCCACGCAGGCACAGAGTGTGCC...TGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp CAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCAGGCACACTCTGTGCCTaGGTGGAGGCCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: QVRRLYPTKQRQSLLHLPGTLCA*VEARPM
Trigger: CATCGGCCTGGCCTCCACGCAGGCACAGAGTGTGCC...TGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCAGCTGCAGGTGCTGGATaGTGGCAGGGTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QVRRLYPTKQRQSLLHLPAAGAG*WQGPGW
Trigger: CCAGCCAGGACCCTGCCAGCATCCAGCACCTGCAGC...TGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp ACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACAGTCCCTCCTACATCTaGCATGAACAGGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TRTWTWHGLRGSHRSKDDSPSYI*HEQALL
Trigger: GAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACT...GTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCACCTGAGAAGTGTGGCTaGCAGAGTGGTGTAGCGGTC +
Preference number: 4 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSPEKCG*QSGVAV
Trigger: GACCGCTACACCACTCTGGCAGCCACACTTCTCAGG...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGACCCCCTCCTGAAGCCAGGAGAGCCCTaGCTGCCTTCCCTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: SYICHEQALLLALHDPLLKPGEP*LPSLLA
Trigger: AGCTAACAGGGAAGGCAGGCAGGGCTCTCCTGGCTT...CAGGAGGGGGTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGCTGCTCGGGCCTTGCTaGCTTGTGAGCTCAGCTACT +
Preference number: 4 (lower is better)
Translates to: GRPLQFQVRRLYPTKQRQLLGPC*LVSSAT
Trigger: AGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAG...CTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGACCCCCTCCTGCTGCTCGGGCCTTGCTaGCTTGTGAGCTCAGCTACT +
Preference number: 4 (lower is better)
Translates to: SYICHEQALLLALHDPLLLLGPC*LVSSAT
Trigger: AGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAG...CAGGAGGGGGTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTACTCCTCAGGGTGGCTaGGAACTGCCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGTPQGG*ELPSAS
Trigger: GCTGGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGT...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACGAGACACATGCAGACTaGAATGCCTGCCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHETHAD*NACQAP
Trigger: GGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTC...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp ACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCAGGCACCCCTTTCCGAGACACATGCAGACTaGAATGCCTGCCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: TLVPETHADCNACQAPLSETHAD*NACQAP
Trigger: GGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTC...GGAAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACGGGAACACACTGGCCTaGAGACACCCTCAATCACGG +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHGNTLA*RHPQSR
Trigger: CCGTGATTGAGGGTGTCTGCAGGCCAGTGTGTTCCC...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp GGCCATCTGGGTGGAGATGAAGGTCTCGATGACGCTGTGGTTGGATGGCAGCAGTCAATCAGCCCTCCCTaGCCTGCATGGGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: GHLGGDEGLDDAVVGWQQSISPP*PAWVNL
Trigger: CAAGTTCACCCATGCAGGGCAGGGAGGGCTGATTGA...CTGCTGCCATCCAACCACAGCGTCATCGAGACCTTCATCTCCACCCAGATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CCA 90 bp GGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGAGCTCCGTCTGCAGCTaGCTCAGTTTAGAAACCATG +
Preference number: 4 (lower is better)
Translates to: GCWLRPGDVCSKLCSAVRSSVCS*LSLETM
Trigger: CATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCT...CCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CCA 90 bp CCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTAGCTCCGTCTGCAGCTaGCTCAGTTTAGAAACCATG +
Preference number: 4 (lower is better)
Translates to: PGPGLGTGCEAPTGVRTTSSVCS*LSLETM
Trigger: CATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCT...AGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCTCTCCCCCAGCCCATTaGGCAGCTCAGCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: HPQSRKHTCPRDTCRLQCSPPAH*AAQPAP
Trigger: GGGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGA...GCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACTGGGACAGGTGGGACTaGTTGAGGCCAGTGGTATCG +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHWDRWD*LRPVVS
Trigger: CGATACCACTGGCCTCAACCAGTCCCACCTGTCCCA...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp CTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCCTCCCTGCCCTGCATaGGTGAACTGCTGCGCCACC +
Preference number: 4 (lower is better)
Translates to: LNHGNTLVPETHADCNACPPCPA*VNCCAT
Trigger: GGTGGCGCAGCAGTTCACCCATGCAGGGCAGGGAGG...GCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS-3UTR CCA 90 bp GCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTGTCGTAGCTCATCACCTGTaGGCTCTTCAATCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ADPGPLRAQQVTATQACVVAHHL*ALQSAL
Trigger: GAGGGCTGATTGAAGAGCCCACAGGTGATGAGCTAC...GACACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCGTAGCTCATCACCTGTaGGCTCTTCAATCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GHPRPFPESQGRRGTLKAVAHHL*ALQSAL
Trigger: GAGGGCTGATTGAAGAGCCCACAGGTGATGAGCTAC...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGTAGCTCATCACCTGTaGGCTCTTCAATCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: SHGGHEGALGHMALHRWHVAHHL*ALQSAL
Trigger: GAGGGCTGATTGAAGAGCCCACAGGTGATGAGCTAC...ATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGGGGACACCCCTCTCTaGATGCATTCCGCCCTATTG +
Preference number: 4 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVGDTPL*MHSALL
Trigger: CAATAGGGCGGAATGCATCCAGAGAGGGGTGTCCCC...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCACCGTGGACCTTACTaGGGGAGAGGGCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGHRGPY*GRGQVE
Trigger: CTCCACCTGCCCTCTCCCCCAGTAAGGTCCACGGTG...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACCCGTGGGGGACACTTaGTGGAGGGGTGTAGACACT +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTPVGDT*WRGVDT
Trigger: AGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGG...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp CCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACCCGTGGGGGACACTTaGTGGAGGGGTGTAGACACT +
Preference number: 4 (lower is better)
Translates to: PLHPLTANLYHHLLLCGAPVGDT*WRGVDT
Trigger: AGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGG...TGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACACTGCTGAGACCAGCTTaGCTTCTGTACTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTLLRPA*LLYSAG
Trigger: GCCTGCTGAGTACAGAAGCCAAGCTGGTCTCAGCAG...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGTGATGGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGAGGTTCTGGGGCTGCTaGTTGAGGCCTGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: GDGVSTNGMWVTSWKELGRFWGC*LRPGDV
Trigger: GACATCCCCAGGCCTCAACCAGCAGCCCCAGAACCT...CCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCCATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACATGGCTCTGCACAGGTaGCATGAGCGGCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHMALHR*HERLLV
Trigger: TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCAT...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp GGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATGGGAGGTCATGGGGCCTaGGAGAGGGAATCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLRGMMLLGTNTGKLEVMGGHGA*ERESLG
Trigger: CCCCAGCGATTCCCTCTCCCAGGCCCCATGACCTCC...CATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGACCAGGACCTGGACTTaGCACGGGTTGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: CIPRSSDSPSYICHEQALTRTWT*HGLRGS
Trigger: GGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT...CAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGAGGCCTGGGGATGGACCATGCTTGTCCTaGGTTCACAGGCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PGSEAMMRFWGCWLRPGDGPCLS*VHRLLC
Trigger: ACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCC...ATCCCCAGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CCA 90 bp CCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAATACGTGCATTCACATaGGAACACACTGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PMTRVEAPVLVNVGPREAIRAFT*EHTGLQ
Trigger: CTGCAGGCCAGTGTGTTCCCATGTGAATGCACGTAT...TGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp GGCTGCTGGTTGAGGCCTGGGGATGTCTGCTCCAAGCTGTGCAGTGCTGTCAGGATACGTGCATTCACATaGGAACACACTGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GCWLRPGDVCSKLCSAVRIRAFT*EHTGLQ
Trigger: CTGCAGGCCAGTGTGTTCCCATGTGAATGCACGTAT...CCTGACAGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCTCAACCAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CCA 90 bp TGCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGGGGGACACCCCTCTCTaGATGCATTCCGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: CRHPQSRKHTCPRDTCRLGDTPL*MHSAAA
Trigger: CGCAGCGGCGGAATGCATCCAGAGAGGGGTGTCCCC...CAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538646.5
CDS-3UTR TCA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAACAGGTGGGACTGGTTaGGGCCAGTGGTATCGACCA +
Preference number: 4 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATTGGTG*GQWYRP
Trigger: TGGTCGATACCACTGGCCTCAACCAGTCCCACCTGT...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp TTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGTCTGGGGCTGCTGGTTaGGGCCTGGGGATGTCTGCT +
Preference number: 4 (lower is better)
Translates to: FPLHPLTANLYHHLLLCGSGAAG*GLGMSA
Trigger: AGCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGA...CCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR TCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACCATGACCCCAGGAAGTaGGGCCATGATGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHHDPRK*GHDEVL
Trigger: CAGAACCTCATCATGGCCTCACTTCCTGGGGTCATG...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR TCA 90 bp CAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCATCTGCACAGGTGGCATaGGCGGCTGCTGGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: QTPSITETHLSQRHMQTASAQVA*AAAGRR
Trigger: CCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGA...TGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR TCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCACAGGCCTGTGTCCTaGGAAGTGTGGCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGHRPVS*EVWLPE
Trigger: CTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTG...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCGGTGGGTACATTGGTaGCAGAACAAGGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: PPPSVPSKKTVSHEAATVRWVHW*QNKATL
Trigger: CAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCG...GACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGCCTGTGTGAGTAGGTaGTGGGGTCAGTACAAATGG +
Preference number: 4 (lower is better)
Translates to: PGMWDHACPGFTGSFVPPACVSR*WGQYKW
Trigger: CCATTTGTACTGACCCCATCACCTACTCACACAGGC...AGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTGGCCTCAGAGGCATaGTGCTCTTGGGAACAAATA +
Preference number: 4 (lower is better)
Translates to: QAQGCGTMLVLGSQAPLSLASEA*CSWEQI
Trigger: TATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAG...GGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTGTCCTGGCCTCAGAGGCATaGTGCTCTTGGGAACAAATA +
Preference number: 4 (lower is better)
Translates to: ADPGPLRAQQVTATQACVLASEA*CSWEQI
Trigger: TATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAG...GACACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAAGGCCCCCAGGCTTCTaGGTGTTAGTCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATRPPGF*VLVLST
Trigger: TGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCT...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTAGACGCGGTACACTaGAGGCCAGGTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATVDAVH*RPGSQQ
Trigger: CTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTAC...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp ATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCAGGTGGGTTGCGTTTGCCTaGCGGCCGGCAGACACAAAC +
Preference number: 4 (lower is better)
Translates to: ITETHLSQRHMQTAMPARWVAFA*RPADTN
Trigger: GTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCA...CCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp ACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCAGGCACCCCTTTCCGCCAGGAGCTCCGTCTaGAGCTGGCTCAGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: TLVPETHADCNACQAPLSARSSV*SWLSLE
Trigger: TTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGC...GGAAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACATCAATCAGCCCTCCCTaGCCTGCATGGGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATSISPP*PAWVNC
Trigger: GCAGTTCACCCATGCAGGGCAGGGAGGGCTGATTGA...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACCTAAGGGACCGCCGCTaGTTGAGGGTACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHLRDRR*LRVLLQ
Trigger: CTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCTTAG...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAACTCCAAGCTGTGCAGTaGTGTCAGGGTGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: GVSTNGMWVTSWKELGQELQAVQ*CQGADR
Trigger: CCTGTCAGCACCCTGACAGCACTGCACAGCTTGGAG...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACCTCCAAGCTGTGCAGTaGTGTCAGGGTGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHLQAVQ*CQGADR
Trigger: CCTGTCAGCACCCTGACAGCACTGCACAGCTTGGAG...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACTCCAAGCTGTGCAGTaGTGTCAGGGTGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: PLHPLTANLYHHLLLCGALQAVQ*CQGADR
Trigger: CCTGTCAGCACCCTGACAGCACTGCACAGCTTGGAG...TGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAGTCTGCTCCAAGCTGTaGAGTGCTGTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTVCSKL*SAVRVL
Trigger: CAGCACCCTGACAGCACTGCACAGCTTGGAGCAGAC...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp GCCAGGCACCCCTTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCGTCTGCTCCAAGCTGTaGAGTGCTGTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ARHPFPLHPLTANLYHHLVCSKL*SAVRVL
Trigger: CAGCACCCTGACAGCACTGCACAGCTTGGAGCAGAC...GAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAAGGGGTGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAAGGCCTGGGGATGTCTaGTCCAAGCTGTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GVSTNGMWVTSWKELGQERPGDV*SKLCSA
Trigger: AGCACTGCACAGCTTGGAGCAGACATCCCCAGGCCT...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACATCTGAGGTGAAGACCTaGTTGGTGGGCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATSEVKT*LVGVRL
Trigger: CAGCCTCACGCCCACCAAGCAGGTCTTCACCTCAGA...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000560968.5
CDS-3UTR GCA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAACCTGAGAAGTGTGGCTaGCAGAGTGGTGTAGCGGTC +
Preference number: 4 (lower is better)
Translates to: GVSTNGMWVTSWKELGQEPEKCG*QSGVAV
Trigger: GACCGCTACACCACTCTGGCAGCCACACTTCTCAGG...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAAAGCCAGGAGAGCCCTaGCTGCCTTCCCTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GVSTNGMWVTSWKELGQEKPGEP*LPSLLA
Trigger: AGCTAACAGGGAAGGCAGGCAGGGCTCTCCTGGCTT...TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGTCGAGACAGAGGAGCTaGCCCACCAGGACCTGGACT +
Preference number: 4 (lower is better)
Translates to: CIPRSSDSPSYICHEQALSRQRS*PTRTWT
Trigger: AGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTCTCGA...CAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCGAGCTCAGCTACTCCTaGCCCAAACAAGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SSDSPSYICHEQALLLALELSYS*PKQGQG
Trigger: ACCCTGCCCTTGTTTGGGGCAGGAGTAGCTGAGCTC...GAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATACAAGCTGCAGGGGGTaGCGGGTCACCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: WPQRHDALGNKYRKAGGHTSCRG*RVTPGL
Trigger: AAGGCCTGGGGTGACCCGGCACCCCCTGCAGCTTGT...ATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACTCTATCATCATCTCCTaGTGTGTGGGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHSIIIS*CVGHRA
Trigger: CGCCCTGTGCCCCACACAGCAGGAGATGATGATAGA...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp ACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCAGGCACCCCTTTGAGACACATGCAGACTaGAATGCCTGCCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: THLSQRHMQTAMPARHPFETHAD*NACQAP
Trigger: GGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTC...AAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp CTGGCCTGCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCGGGAACACACTGGCCTaGAGACACCCTCAATCACGG +
Preference number: 4 (lower is better)
Translates to: LACRHPQSRKHTCPRDTCGNTLA*RHPQSR
Trigger: CCGTGATTGAGGGTGTCTGCAGGCCAGTGTGTTCCC...GCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGCAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAGGGACTACAGGCACGTaGCTCCACGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTGTTGT*LHAWLI
Trigger: AATTAGCCAGGCGTGGAGGCACGTGCCTGTAGTCCC...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACAATCTCAGCTCACTaGAACCTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHTISAH*NLRLPG
Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGCTGAGATTGT...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACGGCTCACCCAGTGCCTaGATCAGTGCCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHGSPSA*ISASLL
Trigger: GAGCAAAGAGGCACTGATCCAGGCACTGGGTGAGCC...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGGCTCACCCAGTGCCTaGATCAGTGCCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATGSPSA*ISASLL
Trigger: GAGCAAAGAGGCACTGATCCAGGCACTGGGTGAGCC...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGACTCTTTGAGGATGGGTaGCGTGAAGTCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: PVGTLVTEQGHADPGPLRLFEDG*REVFPI
Trigger: GATGGGGAAGACTTCACGCCACCCATCCTCAAAGAG...TCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGAAGGAGTTGGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACACTCTTTGAGGATGGGTaGCGTGAAGTCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: GRSWGRKEWPGGYIGDRTLFEDG*REVFPI
Trigger: GATGGGGAAGACTTCACGCCACCCATCCTCAAAGAG...TGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCCAACTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATACCACGGCTTTCTGGTaGGCCGCCTCCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DTLNHGNTLVPETHADCNTTAFW*AASSGL
Trigger: CAGCCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGT...ATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACAGGTGTTGGGACAGGTaGGACTGGTTGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHRCWDR*DWLRPV
Trigger: CACTGGCCTCAACCAGTCCCACCTGTCCCAACACCT...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp TCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGACCCCCTCCTGTCCTCCGCCCCTTCTTaGTTGGTAGCTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: SYICHEQALLLALHDPLLSSAPS*LVAHHL
Trigger: CAGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGA...CAGGAGGGGGTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCTGGAACAGGATCTGCTaGGATGCTGGGCCCCACTTG +
Preference number: 4 (lower is better)
Translates to: SSDSPSYICHEQALLLALWNRIC*DAGPHL
Trigger: CAAGTGGGGCCCAGCATCCCAGCAGATCCTGTTCCA...GAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACTGGAACAGGATCTGCTaGGATGCTGGGCCCCACTTG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHWNRIC*DAGPHL
Trigger: CAAGTGGGGCCCAGCATCCCAGCAGATCCTGTTCCA...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACGGGGACACCCCTCTCTaGATGCATTCCGCCCTATTG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHGDTPL*MHSALL
Trigger: CAATAGGGCGGAATGCATCCAGAGAGGGGTGTCCCC...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCCTTCTTTGCGCCGGTTaGCAAACCAGTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: GHPRPFPESQGRRGTLKALLCAG*QTSCRH
Trigger: GTGTCTACAACTGGTTTGCCAACCGGCGCAAAGAAG...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CCA 90 bp AGCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATCTTCTTTGCGCCGGTTaGCAAACCAGTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: SHGGHEGALGHMALHRWHLLCAG*QTSCRH
Trigger: GTGTCTACAACTGGTTTGCCAACCGGCGCAAAGAAG...ATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000540108.1
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACGCCATGATGAGGTTCTaGGGCTGCTGGTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHAMMRF*GCWLRP
Trigger: AGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGC...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp CATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGCGCCATGATGAGGTTCTaGGGCTGCTGGTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HPLTANLYHHLLLCGAQGAMMRF*GCWLRP
Trigger: AGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGC...GCCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACGCCATGAAGGGGCTCTaGGTCACATGGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHAMKGL*VTWLCT
Trigger: TGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGC...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGCCATGAAGGGGCTCTaGGTCACATGGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATAMKGL*VTWLCT
Trigger: TGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGC...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATGGACGTGGAGGGTGGTaGCCTGAGATGCCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: WPQRHDALGNKYRKAGGHGRGGW*PEMPAC
Trigger: ACACGCCGGCATCTCAGGCCACCACCCTCCACGTCC...ATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACCTGGAGTCTGAGCTCTaGTACAGCACCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SDSPSYICHEQALLLALHLESEL*YSTRLL
Trigger: CAGCAGCCTGGTGCTGTACCAGAGCTCAGACTCCAG...GTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGTGATGGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGAGGTGCCGTGGTTACTaGGAGGAAGAGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: GDGVSTNGMWVTSWKELGRCRGY*EEEAIW
Trigger: CCAGATGGCCTCTTCCTCCCAGTAACCACGGCACCT...CCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCCATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCAATGTGGGTCACTAGCTaGAAGGAGTTGGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GCGTMLVLGSQAPLSLLAMWVTS*KELGQE
Trigger: TTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACAT...TGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTAGTACAAATGGCATGTaGGTCACTAGCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GAGRSGPVGTLVTEQGHASTNGM*VTSWKE
Trigger: CTCCTTCCAGCTAGTGACCCACATGCCATTTGTACT...AGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCAGCAGGCCCAGGGATGTaGGACCATGCTTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QVRRLYPTKQRQSLLHLPAGPGM*DHACPG
Trigger: CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGC...TGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp GGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATGGCTGCAGGTAGGACTTaGCCATCTTCGCCACACGCC +
Preference number: 4 (lower is better)
Translates to: GLRGMMLLGTNTGKLEVMAAGRT*PSSPHA
Trigger: GGCGTGTGGCGAAGATGGTCAAGTCCTACCTGCAGC...CATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp CACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCTGGGAGTGCCCTTGTTaGGGTGTTGGGACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HPQSRKHTCPRDTCRLQCWECPC*GVGTGG
Trigger: CCCACCTGTCCCAACACCTCAACAAGGGCACTCCCA...GCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR TCA 90 bp TGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGGGAGGCCTCAGTGTCTaGGGTGAAGACCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: CIPRSSDSPSYICHEQALGGLSV*GEDLLG
Trigger: ACCAAGCAGGTCTTCACCTCAGACACTGAGGCCTCC...CAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000560968.5
CDS-3UTR TCA 90 bp GGCCAGGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGAGAGCCCTCCCTTTCTaGTGCATCAGAGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GQAGLRGMMLLGTNTGKLRALPF*CIRAEW
Trigger: CCACTCTGCTCTGATGCATCAGAAAGGGAGGGCTCT...CAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCACTCCTACATCTGCCATaGACAGGCTTTGCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSLLHLP*TGFAPS
Trigger: GCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAG...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR TCA 90 bp ACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGTCTGGGGCTGCTGGTTaGGGCCTCTTTGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TPSITETHLSQRHMQTAMSGAAG*GLFAQP
Trigger: GGGCTGAGCAAAGAGGCCTCAACCAGCAGCCCCAGA...CATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544574.5
CDS-3UTR GCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACGCCAGGAGCTCCGTCTaGAGCTGGCTCAGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHARSSV*SWLSLE
Trigger: TTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGC...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp GCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGGCCAGGAGCTCCGTCTaGAGCTGGCTCAGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: ASIDSQPLSSSPAVWGTGARSSV*SWLSLE
Trigger: TTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGC...CCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAGGATCAGTGCCTCTTTaGTCAGCCCTGACTCGAGCA +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTGSVPL*SALTRA
Trigger: TGCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCC...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp GGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATGCCCCGGCTCACCCAGTaGCTGGATCAGTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GLRGMMLLGTNTGKLEVMPRLTQ*LDQCLF
Trigger: AAAGAGGCACTGATCCAGGCACTGGGTGAGCCGGGG...CATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCAGCATGGGTGAACTGCTaGGCCACCTCTCGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QVRRLYPTKQRQSLLHLPAWVNC*ATSRCL
Trigger: CAAGCAGCGAGAGGTGGCGCAGCAGTTCACCCATGC...TGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCAGGAAGGCTTCTTCTTTaGGCCGGTTGGCAAACCAGT +
Preference number: 4 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSGRLLL*AGWQTS
Trigger: ACTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCC...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR GCA 90 bp GCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCGTCTGCTCCAAGCTGTaGAGTGCTGTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ADTLNHGNTLVPETHADCVCSKL*SAVRVL
Trigger: CAGCACCCTGACAGCACTGCACAGCTTGGAGCAGAC...GCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp CAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCACAGCTGCTCGGGCCTTaGTGCCTTGTGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QVRRLYPTKQRQSLLHLPQLLGP*CLVSSA
Trigger: AGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTG...TGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGTGTCCCTCCTGGCAGTaGTCAGGACCTCAGACTCCT +
Preference number: 4 (lower is better)
Translates to: CIPRSSDSPSYICHEQALCPSWQ*SGPQTP
Trigger: AGGAGTCTGAGGTCCTGAGCACTGCCAGGAGGGACA...CAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCAGACTGCAATGCCTaGCAGGCACCCCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PSITETHLSQRHMQTAMPADCNA*QAPLSP
Trigger: AGGGGAAAGGGGTGCCTGGCAGGCATTGCAGTCTGC...AGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAACATGCAGACTGCAATaGCTGCCAGGCACCCCTTTC +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTTCRLQ*LPGTPF
Trigger: GAAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGT...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp GCCAGGCACCCCTTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCACATGCAGACTGCAATaGCTGCCAGGCACCCCTTTC +
Preference number: 4 (lower is better)
Translates to: ARHPFPLHPLTANLYHHLTCRLQ*LPGTPF
Trigger: GAAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGT...GAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAAGGGGTGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACGCACTAGGGATCTaGTCACACAAGCAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTHALGI*SHKQSC
Trigger: GCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTG...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACCAGGCTGGAGTGCAGTaGAGTGGCACAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHQAGVQ*SGTISA
Trigger: AGCTGAGATTGTGCCACTGCACTGCACTCCAGCCTG...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACCTCTTTGAGGATGGGTaGCGTGAAGTCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHLFEDG*REVFPI
Trigger: GATGGGGAAGACTTCACGCCACCCATCCTCAAAGAG...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp ATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCAGGTGGGACAGGTGGGACTaGTTGAGGCCAGTGGTATCG +
Preference number: 4 (lower is better)
Translates to: ITETHLSQRHMQTAMPARWDRWD*LRPVVS
Trigger: CGATACCACTGGCCTCAACCAGTCCCACCTGTCCCA...CCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACTCCTCCGCCCCTTCTTaGTTGGTAGCTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHSSAPS*LVAHHL
Trigger: CAGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGA...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp CATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGCTCCTCCGCCCCTTCTTaGTTGGTAGCTCATCACCTG +
Preference number: 4 (lower is better)
Translates to: HPLTANLYHHLLLCGAQGSSAPS*LVAHHL
Trigger: CAGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGA...GCCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS-3UTR CCA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTTGGAACAGGATCTGCTaGGATGCTGGGCCCCACTTG +
Preference number: 4 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGWNRIC*DAGPHL
Trigger: CAAGTGGGGCCCAGCATCCCAGCAGATCCTGTTCCA...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTGGGGACACCCCTCTCTaGATGCATTCCGCCCTATTG +
Preference number: 4 (lower is better)
Translates to: PPSVPSKKTVSHEAATVPGDTPL*MHSALL
Trigger: CAATAGGGCGGAATGCATCCAGAGAGGGGTGTCCCC...AGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACTGCTGAGACCAGCTTaGCTTCTGTACTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTLLRPA*LLYSAG
Trigger: GCCTGCTGAGTACAGAAGCCAAGCTGGTCTCAGCAG...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp TTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGAGGTTCTGGGGCTGCTaGTTGAGGCCTGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: FPLHPLTANLYHHLLLCGRFWGC*LRPGDV
Trigger: GACATCCCCAGGCCTCAACCAGCAGCCCCAGAACCT...CCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CCA 90 bp CTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGCCATGATGAGGTTCTaGGGCTGCTGGTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LHPLTANLYHHLLLCGAQAMMRF*GCWLRP
Trigger: AGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGC...CTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp CCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTAGGTGCCGTGGTTACTaGGAGGAAGAGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PPSVPSKKTVSHEAATVPRCRGY*EEEAIW
Trigger: CCAGATGGCCTCTTCCTCCCAGTAACCACGGCACCT...AGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATCCATAGGCCCAGGCTaGGGGTGCCCAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: QVRRLYPTKQRQSLLHLPSIGPG*GCPSHR
Trigger: CCTATGACTTGGGCACCCCCAGCCTGGGCCTATGGA...TGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGAGTACAAATGGCATGTaGGTCACTAGCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: HPRPFPESQGRRGTLKARSTNGM*VTSWKE
Trigger: CTCCTTCCAGCTAGTGACCCACATGCCATTTGTACT...CCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp TGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATTGCCCCACCAGGACCTaGACTTGGCACGGGTTGCGA +
Preference number: 4 (lower is better)
Translates to: WPQRHDALGNKYRKAGGHCPTRT*TWHGLR
Trigger: TCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCA...ATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGGGACCATGCTTGTCCTaGGTTCACAGGCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: GRPLQFQVRRLYPTKQRQGPCLS*VHRLLC
Trigger: ACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCC...CTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACATGAGCCACCACGCCTaGCCCCAGATTACCTTTCTA +
Preference number: 4 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHMSHHA*PQITFL
Trigger: TAGAAAGGTAATCTGGGGCCAGGCGTGGTGGCTCAT...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
3UTR CAA 72 bp ACTGGCCTGCAGACACCCTCAATCACGGAAACACACTaGTCCCAGAGACACATGCAGACTGCAATGCCTGCC +
Preference number: 4 (lower is better)
Translates to: TGLQTPSITETH*SQRHMQTAMPA
Trigger: GGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGCAGGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR TCA 90 bp CACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCACAGGTGGGACTGGTTaGGGCCAGTGGTATCGACCA +
Preference number: 4 (lower is better)
Translates to: HPQSRKHTCPRDTCRLQCTGGTG*GQWYRP
Trigger: TGGTCGATACCACTGGCCTCAACCAGTCCCACCTGT...GCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR TCA 90 bp GGTCACAGCTACACAGGCCTGTGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTACTGGCCTCAGAGGCATaGTGCTCTTGGGAACAAATA +
Preference number: 4 (lower is better)
Translates to: GHSYTGLCPEKCGCQSGVLASEA*CSWEQI
Trigger: TATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAG...TACACCACTCTGGCAGCCACACTTCTCAGGACACAGGCCTGTGTAGCTGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACATGCATTCCGCCCTATTaGACTCCTCCACTAGCGTCT +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTCIPPY*TPPLAS
Trigger: AGACGCTAGTGGAGGAGTGCAATAGGGCGGAATGCA...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAACACCCCTCTCTGGATaGATTCCGCCCTATTGCACT +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTTPLSG*IPPYCT
Trigger: AGTGCAATAGGGCGGAATGCATCCAGAGAGGGGTGT...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCACACCCCTCTCTGGATaGATTCCGCCCTATTGCACT +
Preference number: 4 (lower is better)
Translates to: PPPSVPSKKTVSHEAATVTPLSG*IPPYCT
Trigger: AGTGCAATAGGGCGGAATGCATCCAGAGAGGGGTGT...GACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAGGAAGGCTTCTTCTTTaGGCCGGTTGGCAAACCAGT +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTGRLLL*AGWQTS
Trigger: ACTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCC...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp CCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCGGAAGGCTTCTTCTTTaGGCCGGTTGGCAAACCAGT +
Preference number: 4 (lower is better)
Translates to: PPPSVPSKKTVSHEAATVGRLLL*AGWQTS
Trigger: ACTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCC...GACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR GCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACATCCATGGCCAGCTTGTaGCGGAAGGCTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTSMASL*RKASSL
Trigger: CAAAGAAGAAGCCTTCCGGCACAAGCTGGCCATGGA...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp TTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGCTAAGGGACCGCCGCTaGTTGAGGGTACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: FPLHPLTANLYHHLLLCGLRDRR*LRVLLQ
Trigger: CTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCTTAG...CCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp CAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCACTCCAAGCTGTGCAGTaGTGTCAGGGTGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: QTPSITETHLSQRHMQTALQAVQ*CQGADR
Trigger: CCTGTCAGCACCCTGACAGCACTGCACAGCTTGGAG...TGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp CAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCAGTCTGCTCCAAGCTGTaGAGTGCTGTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QVRRLYPTKQRQSLLHLPVCSKL*SAVRVL
Trigger: CAGCACCCTGACAGCACTGCACAGCTTGGAGCAGAC...TGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACTGTCCCAGAGACACATaGAGACTGCAATGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHCPRDT*RLQCLP
Trigger: TGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACA...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp TCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGACCCCCTCCTGAGCTCCGTCTGCAGCTaGCTCAGTTTAGAAACCATG +
Preference number: 4 (lower is better)
Translates to: SYICHEQALLLALHDPLLSSVCS*LSLETM
Trigger: CATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCT...CAGGAGGGGGTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAGTAGCTCATCACCTGTaGGCTCTTCAATCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTVAHHL*ALQSAL
Trigger: GAGGGCTGATTGAAGAGCCCACAGGTGATGAGCTAC...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp CTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCATGGCTCTGCACAGGTaGCATGAGCGGCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LNHGNTLVPETHADCNACMALHR*HERLLV
Trigger: TACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCAT...GCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp ACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGGGGCTCTGGGTCACATaGCTCTGCACAGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: TPSITETHLSQRHMQTAMGLWVT*LCTGGM
Trigger: CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCC...CATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp TTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCCATGAAGGGGCTCTaGGTCACATGGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: FPLHPLTANLYHHLLLCGAMKGL*VTWLCT
Trigger: TGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGC...CCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp CCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTGTAGCTCCTGTGCCCTaGGGTCACCTCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PPSVPSKKTVSHEAATVPVAPVP*GHLFLL
Trigger: GAGAAGAAAGAGGTGACCCCAGGGCACAGGAGCTAC...AGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GGTGATGGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGGGACCATGCTTGTCCTaGGTTCACAGGCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: GDGVSTNGMWVTSWKELGGPCLS*VHRLLC
Trigger: ACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCC...CCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCCATCACC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp AGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGGACCATGCTTGTCCTaGGTTCACAGGCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SDSPSYICHEQALLLALHGPCLS*VHRLLC
Trigger: ACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCC...GTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGGATCAGTGCCTCTTTaGTCAGCCCTGACTCGAGCA +
Preference number: 4 (lower is better)
Translates to: PSITETHLSQRHMQTAMPGSVPL*SALTRA
Trigger: TGCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCC...AGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR GCA 90 bp TGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATGTCTGCTCCAAGCTGTaGAGTGCTGTCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WPQRHDALGNKYRKAGGHVCSKL*SAVRVL
Trigger: CAGCACCCTGACAGCACTGCACAGCTTGGAGCAGAC...ATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAAGTCCCTCCTACATCTaGCATGAACAGGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATSPSYI*HEQALL
Trigger: GAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACT...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp CAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCATCTATCATCATCTCCTaGTGTGTGGGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: QTPSITETHLSQRHMQTASIIIS*CVGHRA
Trigger: CGCCCTGTGCCCCACACAGCAGGAGATGATGATAGA...TGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp CACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCACATGCAGACTGCAATaGCTGCCAGGCACCCCTTTC +
Preference number: 4 (lower is better)
Translates to: HPQSRKHTCPRDTCRLQCTCRLQ*LPGTPF
Trigger: GAAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGT...GCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp TTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGATGAGGTTCTGGGGCTaGTGGTTGAGGCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: FPLHPLTANLYHHLLLCGMRFWG*WLRPLC
Trigger: GCAAAGAGGCCTCAACCAGCAGCCCCAGAACCTCAT...CCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544574.5
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACAGCTCCGTCTGCAGCTaGCTCAGTTTAGAAACCATG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHSSVCS*LSLETM
Trigger: CATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCT...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp AGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCAGCTCCGTCTGCAGCTaGCTCAGTTTAGAAACCATG +
Preference number: 4 (lower is better)
Translates to: SSDSPSYICHEQALLLALSSVCS*LSLETM
Trigger: CATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCT...GAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp GCCAGGCACCCCTTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCAGCTCCGTCTGCAGCTaGCTCAGTTTAGAAACCATG +
Preference number: 4 (lower is better)
Translates to: ARHPFPLHPLTANLYHHLSSVCS*LSLETM
Trigger: CATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCT...GAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAAGGGGTGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp GACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATTGGAACAGGATCTGCTaGGATGCTGGGCCCCACTTG +
Preference number: 4 (lower is better)
Translates to: DTLNHGNTLVPETHADCNWNRIC*DAGPHL
Trigger: CAAGTGGGGCCCAGCATCCCAGCAGATCCTGTTCCA...ATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS-3UTR CCA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACTTCTTTGCGCCGGTTaGCAAACCAGTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: RYTPRHALGICSHKQSCTLLCAG*QTSCRH
Trigger: GTGTCTACAACTGGTTTGCCAACCGGCGCAAAGAAG...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CCA 90 bp TTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGCTGCTGAGACCAGCTTaGCTTCTGTACTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FPLHPLTANLYHHLLLCGLLRPA*LLYSAG
Trigger: GCCTGCTGAGTACAGAAGCCAAGCTGGTCTCAGCAG...CCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CCA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACATACGTGCATTCACATaGGAACACACTGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: YTPRHALGICSHKQSCTHIRAFT*EHTGLQ
Trigger: CTGCAGGCCAGTGTGTTCCCATGTGAATGCACGTAT...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR GCA 90 bp GACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATTCTATCATCATCTCCTaGTGTGTGGGGCACAGGGCG +
Preference number: 4 (lower is better)
Translates to: DTLNHGNTLVPETHADCNSIIIS*CVGHRA
Trigger: CGCCCTGTGCCCCACACAGCAGGAGATGATGATAGA...ATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp GGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATGCTCTTTGAGGATGGGTaGCGTGAAGTCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: GLRGMMLLGTNTGKLEVMLFEDG*REVFPI
Trigger: GATGGGGAAGACTTCACGCCACCCATCCTCAAAGAG...CATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CCA 90 bp CACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTCTTTGAGGATGGGTaGCGTGAAGTCTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: HPQSRKHTCPRDTCRLQCLFEDG*REVFPI
Trigger: GATGGGGAAGACTTCACGCCACCCATCCTCAAAGAG...GCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CCA 90 bp AGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCAGTACAAATGGCATGTaGGTCACTAGCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SSDSPSYICHEQALLLALSTNGM*VTSWKE
Trigger: CTCCTTCCAGCTAGTGACCCACATGCCATTTGTACT...GAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR GCA 90 bp GACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATTGTCCCAGAGACACATaGAGACTGCAATGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: DTLNHGNTLVPETHADCNCPRDT*RLQCLP
Trigger: TGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACA...ATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR GCA 90 bp TTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGATAGCGCACACCTATTaGACTCCTCCACTAGCGTCT +
Preference number: 4 (lower is better)
Translates to: FPLHPLTANLYHHLLLCGIAHTY*TPPLAS
Trigger: AGACGCTAGTGGAGGAGTGCAATAGGTGTGCGCTAT...CCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS-3UTR CCA 90 bp CCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTAGCTCCGTCTGCAGCTaGCTCAGTTTAGAAACCATG +
Preference number: 4 (lower is better)
Translates to: PSITETHLSQRHMQTAMPSSVCS*LSLETM
Trigger: CATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCT...AGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CCA 90 bp CAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATACGTGCATTCACATaGGAACACACTGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QTPSITETHLSQRHMQTAIRAFT*EHTGLQ
Trigger: CTGCAGGCCAGTGTGTTCCCATGTGAATGCACGTAT...TGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS CCA 90 bp GCCACGCGGCCCGGGTCCACCACGCTAGCCGCCTCCCCCACCGCGTaGGTTGCGTTTGCCTGCCGGCCGGCAGACACAAACCAAACTCCT +
Preference number: 5 (lower is better)
Translates to: ATRPGSTTLAASPTA*VAFACRPADTNQTP
Trigger: AGGAGTTTGGTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGCGGCTAGCGTGGTGGACCCGGGCCGCGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538626.2
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS GCA 90 bp GCGGCCCGGGTCCACCACGCTAGCCGCCTCCCCCACCGCGTGGGTTaGGTTTGCCTGCCGGCCGGCAGACACAAACCAAACTCCTTGCAC +
Preference number: 5 (lower is better)
Translates to: AARVHHASRLPHRVG*VCLPAGRHKPNSLH
Trigger: GTGCAAGGAGTTTGGTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGCGGCTAGCGTGGTGGACCCGGGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538626.2
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCCCGCGTGGGTTGCGTTaGCCTGCCGGCCGGCAGACA +
Preference number: 5 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPPRGLR*PAGRQT
Trigger: TGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGG...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257555.11
ENST00000560968.5
CDS-3UTR CAA 90 bp GCCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCCCCCCACCGCGTGGGTaGCGTTTGCCTGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: ADDQGGGTCVGERRTQGGPPPRG*RLPAGR
Trigger: CCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGG...GCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGGTAGGAGGGGTGCAGCGGCCGCGTGGGTTGCGTTaGCCTGCCGGCCGGCAGACA +
Preference number: 5 (lower is better)
Translates to: HMALHRWHERLLVGGVQRPRGLR*PAGRQT
Trigger: TGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGG...CCGCTGCACCCCTCCTACCAGCAGCCGCTCATGCCACCTGTGCAGAGCCATGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CAA 90 bp ACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCCCCACCGCGTGGGTaGCGTTTGCCTGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: TRVEAPVLVNVGPREAGSPPPRG*RLPAGR
Trigger: CCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGG...TGAGCCTGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CAA 90 bp GCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGCCCCCACCGCGTGGGTaGCGTTTGCCTGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: AMVAMKGLWVTWLCTGGMPPPRG*RLPAGR
Trigger: CCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGG...CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CAA 90 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGCCGCAGGACTCCCCCTaGTCCAGGGGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RSCPTRTWTWHGLRGSHRPQDSP*SRGPSP
Trigger: TGGAGAAGGCCCCCTGGACAAGGGGGAGTCCTGCGG...CCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CACCTCAGCTTGGCCAGTTCCCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCGATGCTGGGCCCCACTaGAAACGGTTCCTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: HLSLASSPALLSCSGLAADAGPH*KRFLRP
Trigger: GGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATC...GGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGGGAACTGGCCAAGCTGAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCGAGGTGAAGACCTGCTaGGTGGGCGTGAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LCTPSSLHGLGRLRALPFEVKTC*VGVRLA
Trigger: GGCCAGCCTCACGCCCACCAAGCAGGTCTTCACCTC...GAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CAA 90 bp TGGCTGGGCTCCAGGCCCGTGGGGGACACTTGGTGGAGGGGTGTAGACACTGTCAGCAGCCTCCACGGGTaGGGGCGCCTCAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: WLGSRPVGDTWWRGVDTVSSLHG*GRLRAL
Trigger: GAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCT...GACAGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS GCA 90 bp TCCACCACGCTAGCCGCCTCCCCCACCGCGTGGGTTGCGTTTGCCTaGCGGCCGGCAGACACAAACCAAACTCCTTGCACCCACTGCCCC +
Preference number: 5 (lower is better)
Translates to: STTLAASPTAWVAFA*RPADTNQTPCTHCP
Trigger: GGGGCAGTGGGTGCAAGGAGTTTGGTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGCGGCTAGCGTGGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000560968.5
CDS GCA 90 bp CGGGTCCACCACGCTAGCCGCCTCCCCCACCGCGTGGGTTGCGTTTaGCTGCCGGCCGGCAGACACAAACCAAACTCCTTGCACCCACTG +
Preference number: 5 (lower is better)
Translates to: RVHHASRLPHRVGCV*LPAGRHKPNSLHPL
Trigger: CAGTGGGTGCAAGGAGTTTGGTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGCGGCTAGCGTGGTGGACCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538626.2
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGCCGCGTGGGTTGCGTTaGCCTGCCGGCCGGCAGACA +
Preference number: 5 (lower is better)
Translates to: GHEGALGHMALHRWHERLPRGLR*PAGRQT
Trigger: TGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGG...CAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGCCCCCACCGCGTGGGTaGCGTTTGCCTGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: PRLLSVSPVHTGSSCALGPPPRG*RLPAGR
Trigger: CCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGG...CCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257555.11
ENST00000560968.5
CDS-3UTR CAA 90 bp CCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGCATGTCTCCCCCAGCCCATaGGGCAGCTCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PEQPPRVGAPQSPPFLMHVSPSP*GSSASS
Trigger: GGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGAC...ATGCATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTGTCTCCCCCAGCCCATaGGGCAGCTCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PGPAQLLGPCCLVSSATPVSPSP*GSSASS
Trigger: GGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGAC...AGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTTCTGGGGCTGCTGGTaGAGGCCTGGGGATGTCTGC +
Preference number: 5 (lower is better)
Translates to: LCTPSSLHGLGRLRALPFFWGCW*RPGDVC
Trigger: GCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAA...GAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACAGCAGCCTCCACGGGTaGGGGCGCCTCAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDSSLHG*GRLRAL
Trigger: GAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCT...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CTGTGCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGGACTTGGCACGGGTaGCGAGGCTCCCACAGGAGT +
Preference number: 5 (lower is better)
Translates to: LCTPSSLHGLGRLRALPFWTWHG*RGSHRS
Trigger: ACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCA...GAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCCACCAGGACCTGGACTaGGCACGGGTTGCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPHQDLD*ARVARL
Trigger: GAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTG...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATCACCAGGACCTGGACTaGGCACGGGTTGCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: APRAASTGWGASEPSLSDHQDLD*ARVARL
Trigger: GAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTG...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS TCA 90 bp CCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTGTCTGAGGTaGAGACCTGGGGGAGCAGAGCAGCCTCCTGAGCCCGGGGGATGT +
Preference number: 5 (lower is better)
Translates to: PACEARTHWRPQCLR*RPGGAEQPPEPGGC
Trigger: ACATCCCCCGGGCTCAGGAGGCTGCTCTGCTCCCCCAGGTCTTCACCTCAGACACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000541395.5
CDS TCA 90 bp AGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTGTCTaGGGTGAAGACCTGGGGGAGCAGAGCAGCCTCCTGAGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: RCRRVKPGLTGGLSV*GEDLGEQSSLLSPG
Trigger: CCCCGGGCTCAGGAGGCTGCTCTGCTCCCCCAGGTCTTCACCTCAGACACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541395.5
CDS CCA 90 bp CTCAGCCCTGACTCGAGCAGGGCCGCCAGGAGCTCCGTCTGCAGCTaGCTCAGTTTAGAAACCATGGCTCGGCTGCCACAGGGCCACGCG +
Preference number: 5 (lower is better)
Translates to: LSPDSSRAARSSVCS*LSLETMARLPQGHA
Trigger: CGCGTGGCCCTGTGGCAGCCGAGCCATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGCGGCCCTGCTCGAGTCAGGGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538626.2
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCACCGCGTGGGTTGCGTTaGCCTGCCGGCCGGCAGACA +
Preference number: 5 (lower is better)
Translates to: PMTRVEAPVLVNVGPREAPRGLR*PAGRQT
Trigger: TGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGG...TGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGACCCCCACCGCGTGGGTaGCGTTTGCCTGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: PVGTLVTEQGHADPGPLRPPPRG*RLPAGR
Trigger: CCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGG...TCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257555.11
ENST00000560968.5
CDS-3UTR CAA 90 bp GTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCCCGCAGGACTCCCCCTaGTCCAGGGGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: VAMKGLWVTWLCTGGMSGPQDSP*SRGPSP
Trigger: TGGAGAAGGCCCCCTGGACAAGGGGGAGTCCTGCGG...GCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GGAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATTCCGCCCCTTCTTGGTaGGTAGCTCATCACCTGTGG +
Preference number: 5 (lower is better)
Translates to: GGHCGAGAEPVGRLQVLDSAPSW*VAHHLW
Trigger: CCACAGGTGATGAGCTACCAACCAAGAAGGGGCGGA...ATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CAA 90 bp CCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTGATGCTGGGCCCCACTaGAAACGGTTCCTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: PGPAQLLGPCCLVSSATPDAGPH*KRFLRP
Trigger: GGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATC...AGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp TGGCTGGGCTCCAGGCCCGTGGGGGACACTTGGTGGAGGGGTGTAGACACTGTCGCCCGTGGGGGACACTaGGTGGAGGGGTGTAGACAC +
Preference number: 5 (lower is better)
Translates to: WLGSRPVGDTWWRGVDTVARGGH*VEGCRH
Trigger: GTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGC...GACAGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CAA 90 bp GGGGCAGGAAGGAGTGGCCCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTCCGCAGGACTCCCCCTaGTCCAGGGGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: GAGRSGPVGTLVTEQGHAPQDSP*SRGPSP
Trigger: TGGAGAAGGCCCCCTGGACAAGGGGGAGTCCTGCGG...AGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCCACTCCTTCCTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CAGCTGTCCAGGAAGGGCCACGGTTGCTCGGCAGGCTCAGGTCCTCCAGGCAGGGACAGGTGGGACTGGTaGAGGCCAGTGGTATCGACC +
Preference number: 5 (lower is better)
Translates to: QLSRKGHGCSAGSGPPGRDRWDW*RPVVST
Trigger: GGTCGATACCACTGGCCTCAACCAGTCCCACCTGTC...CCTGCCTGGAGGACCTGAGCCTGCCGAGCAACCGTGGCCCTTCCTGGACAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GCACCCCGAGCAGCCTCCACGGGTTGGGGCGCCTCAGAGCCCTCCCTTTCTGATGACAGGTGGGACTGGTaGAGGCCAGTGGTATCGACC +
Preference number: 5 (lower is better)
Translates to: APRAASTGWGASEPSLSDDRWDW*RPVVST
Trigger: GGTCGATACCACTGGCCTCAACCAGTCCCACCTGTC...ATCAGAAAGGGAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCTCGGGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GAGGACACTGTGGGGCTGGCGCTGAGCCGGTGGGCCGGCTGCAGGTGCTGGATGTTCATGGGAGTGCCCTaGTTGAGGTGTTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: EDTVGLALSRWAGCRCWMFMGVP*LRCWDR
Trigger: CCTGTCCCAACACCTCAACAAGGGCACTCCCATGAA...CATCCAGCACCTGCAGCCGGCCCACCGGCTCAGCGCCAGCCCCACAGTGTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560968.5
CDS-3UTR CAA 90 bp TGTGTGGGGCACAGGGCGCTCACCGTGGGGGCTCTGCAGCTGAGCCATGGTGGCTCCGCCCCTTCTTGGTaGGTAGCTCATCACCTGTGG +
Preference number: 5 (lower is better)
Translates to: CVGHRALTVGALQLSHGGSAPSW*VAHHLW
Trigger: CCACAGGTGATGAGCTACCAACCAAGAAGGGGCGGA...GCCACCATGGCTCAGCTGCAGAGCCCCCACGGTGAGCGCCCTGTGCCCCACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS-3UTR CAA 90 bp GGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCGATGCTGGGCCCCACTaGAAACGGTTCCTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: GHADPGPLRAQQVTATQADAGPH*KRFLRP
Trigger: GGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATC...GGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp TGGTGGCCTGAGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTGTGATGCTGGGCCCCACTaGAAACGGTTCCTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: WWPEMPACEARTHWRPQCDAGPH*KRFLRP
Trigger: GGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATC...ACACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCTCAGGCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CAA 90 bp GACAGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCTCGATGACGCTGTGGTaGGATGGCAGCAGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: DRGAAPPGPGLGTGCEAPSMTLW*DGSRWL
Trigger: GAGCCACCTGCTGCCATCCAACCACAGCGTCATCGA...GGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACATCAGCTGCTCGGGCCTaGCTGCCTTGTGAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTSAARA*LPCELS
Trigger: GCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGA...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS TCA 90 bp AGATGCCGGCGTGTGAAGCCCGGACTCACTGGAGGCCTCAGTGTCTaGGGTGAAGACCTGGGGGAGCAGAGCAGCCTCCTGCTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: RCRRVKPGLTGGLSV*GEDLGEQSSLLLGG
Trigger: CCCACCAAGCAGGAGGCTGCTCTGCTCCCCCAGGTCTTCACCTCAGACACTGAGGCCTCCAGTGAGTCCGGGCTTCACACGCCGGCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544413.2
CDS-3UTR CAA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACCCCCCACCGCGTGGGTaGCGTTTGCCTGCCGGCCGG +
Preference number: 5 (lower is better)
Translates to: YTPRHALGICSHKQSCTHPPPRG*RLPAGR
Trigger: CCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGG...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp TGCTGGGATGCTGGGCCCCACTTGAAACGGTTCCTCCGCCCCTTCTTGGTTGGTCCGCAGGACTCCCCCTaGTCCAGGGGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: CWDAGPHLKRFLRPFLVGPQDSP*SRGPSP
Trigger: TGGAGAAGGCCCCCTGGACAAGGGGGAGTCCTGCGG...ACCAACCAAGAAGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATCCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CAA 90 bp GGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTGTCTCCCCCAGCCCATaGGGCAGCTCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GCEAPTGVRTTSQPRSSLVSPSP*GSSASS
Trigger: GGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGAC...AAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGAGGCCTGGGGATGTCTCCCCCAGCCCATaGGGCAGCTCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PGSEAMMRFWGCWLRPGDVSPSP*GSSASS
Trigger: GGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGAC...ATCCCCAGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CAA 90 bp TGTGTGGGGCACAGGGCGCTCACCGTGGGGGCTCTGCAGCTGAGCCATGGTGGCTTCATGGGAGTGCCCTaGTTGAGGTGTTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: CVGHRALTVGALQLSHGGFMGVP*LRCWDR
Trigger: CCTGTCCCAACACCTCAACAAGGGCACTCCCATGAA...GCCACCATGGCTCAGCTGCAGAGCCCCCACGGTGAGCGCCCTGTGCCCCACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CAA 90 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGTCCGCCCCTTCTTGGTaGGTAGCTCATCACCTGTGG +
Preference number: 5 (lower is better)
Translates to: RSCPTRTWTWHGLRGSHRSAPSW*VAHHLW
Trigger: CCACAGGTGATGAGCTACCAACCAAGAAGGGGCGGA...CCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp TCCTGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGCCCGTGGGGGACACTaGGTGGAGGGGTGTAGACAC +
Preference number: 5 (lower is better)
Translates to: SWQCSGPQTPQGGCELPSARGGH*VEGCRH
Trigger: GTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGC...TGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CAA 90 bp AAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTTCTGGGGCTGCTGGTaGAGGCCTGGGGATGTCTGC +
Preference number: 5 (lower is better)
Translates to: KCGCQSGVAVPGLSIGPGFWGCW*RPGDVC
Trigger: GCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAA...GCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GCCCGTGTGGGTGTACTGGGCCACCTCGGGCTTGTGGCTGTAGAGGGCGTGGGGTGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGAC +
Preference number: 5 (lower is better)
Translates to: ARVGVLGHLGLVAVEGVGCHEQA*LLALHD
Trigger: GTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCA...CCCCACGCCCTCTACAGCCACAAGCCCGAGGTGGCCCAGTACACCCACACGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CAA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACTGGACTTGGCACGGGTaGCGAGGCTCCCACAGGAGT +
Preference number: 5 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDWTWHG*RGSHRS
Trigger: ACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCA...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTCAGCTGCTCGGGCCTaGCTGCCTTGTGAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKSAARA*LPCELS
Trigger: GCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGA...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS GCA 90 bp TCTTTGCTCAGCCCTGACTCGAGCAGGGCCGCCAGGAGCTCCGTCTaGAGCTGGCTCAGTTTAGAAACCATGGCTCGGCTGCCACAGGGC +
Preference number: 5 (lower is better)
Translates to: SLLSPDSSRAARSSV*SWLSLETMARLPQG
Trigger: GCCCTGTGGCAGCCGAGCCATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGCGGCCCTGCTCGAGTCAGGGCTGAGCAAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538626.2
ENST00000538646.5
ENST00000540108.1
ENST00000541395.5
ENST00000541924.5
ENST00000544413.2
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GAGCATAGTCTGCGGGAGCAGGCCCGTGTGGGTGTACTGGGCCACCTCGGGCTTTGGATCAGTGCCTCTTaGCTCAGCCCTGACTCGAGC +
Preference number: 5 (lower is better)
Translates to: EHSLREQARVGVLGHLGLWISAS*LSPDSS
Trigger: GCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCCA...AAGCCCGAGGTGGCCCAGTACACCCACACGGGCCTGCTCCCGCAGACTATGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CAA 90 bp CCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTGTCTCTCGCTCCTCCTaGCTAGGGTTCTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PGPAQLLGPCCLVSSATPVSRSS*LGFFCL
Trigger: GAGGCAGAAGAACCCTAGCAAGGAGGAGCGAGAGAC...AGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp AGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGATGCATTCCGCCCTATaGCACTCCTCCACTAGCGTC +
Preference number: 5 (lower is better)
Translates to: RSCPTRTWTWHGLRGSHRMHSAL*HSSTSV
Trigger: GACGCTAGTGGAGGAGTGCAATAGGGCGGAATGCAT...CCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACAGGGACCGCCGCTGCTaGAGGGTACTTCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDRDRRC*RVLLQS
Trigger: AGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCT...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CAA 90 bp CCAGGAAGTGAGGCCATGATGAGGTTCTGGGGCTGCTGGTTGAGGCCTGGGGATGCCCGTGGGGGACACTaGGTGGAGGGGTGTAGACAC +
Preference number: 5 (lower is better)
Translates to: PGSEAMMRFWGCWLRPGDARGGH*VEGCRH
Trigger: GTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGC...ATCCCCAGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CAA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACACTGCTGCCCATGCTGTaGATGACCGGCACACTCTGT +
Preference number: 5 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTLLPML*MTGTLC
Trigger: ACAGAGTGTGCCGGTCATCAACAGCATGGGCAGCAG...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GTGGCTGGGCTCCAGGCCCGTGGGGGACACTTGGTGGAGGGGTGTAGACACTGTCTGCTGCCCATGCTGTaGATGACCGGCACACTCTGT +
Preference number: 5 (lower is better)
Translates to: VAGLQARGGHLVEGCRHCLLPML*MTGTLC
Trigger: ACAGAGTGTGCCGGTCATCAACAGCATGGGCAGCAG...ACAGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CAA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTGAGGTGAAGACCTGCTaGGTGGGCGTGAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSEVKTC*VGVRLA
Trigger: GGCCAGCCTCACGCCCACCAAGCAGGTCTTCACCTC...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CAA 90 bp GGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGAGCAGCCTCCACGGGTaGGGGCGCCTCAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: GRPLQFQVRRLYPTKQRQSSLHG*GRLRAL
Trigger: GAGGGCTCTGAGGCGCCCCAACCCGTGGAGGCTGCT...CTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTCACCAGGACCTGGACTaGGCACGGGTTGCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSHQDLD*ARVARL
Trigger: GAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTG...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGTCAGCTGCTCGGGCCTaGCTGCCTTGTGAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: AMVAMKGLWVTWLCTGGMSAARA*LPCELS
Trigger: GCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGA...CATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS TCA 90 bp CAGGGAGGCAGGCTCACCAGGCCCGATGGTCATGACCCCAGGAAGTaGGGCCATGATGAGGTTCTGGGGCTGCTGGTTGAGGCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: QGGRLTRPDGHDPRK*GHDEVLGLLVEASL
Trigger: CAAAGAGGCCTCAACCAGCAGCCCCAGAACCTCATCATGGCCTCACTTCCTGGGGTCATGACCATCGGGCCTGGTGAGCCTGCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544574.5
CDS-3UTR CAA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACCGCGTGGGTTGCGTTaGCCTGCCGGCCGGCAGACA +
Preference number: 5 (lower is better)
Translates to: RYTPRHALGICSHKQSCTPRGLR*PAGRQT
Trigger: TGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGG...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTGGATCAGTGCCTCTTaGCTCAGCCCTGACTCGAGC +
Preference number: 5 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKWISAS*LSPDSS
Trigger: GCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCCA...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCACCGCAGGACTCCCCCTaGTCCAGGGGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSPQDSP*SRGPSP
Trigger: TGGAGAAGGCCCCCTGGACAAGGGGGAGTCCTGCGG...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGGTCTCCCCCAGCCCATaGGGCAGCTCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GRPLQFQVRRLYPTKQRQVSPSP*GSSASS
Trigger: GGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGAC...CTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp AGGTTGGTGGTGTCGGTGATGAGCATAGTCTGCGGGAGCAGGCCCGTGTGGGTGGACAGGTGGGACTGGTaGAGGCCAGTGGTATCGACC +
Preference number: 5 (lower is better)
Translates to: RLVVSVMSIVCGSRPVWVDRWDW*RPVVST
Trigger: GGTCGATACCACTGGCCTCAACCAGTCCCACCTGTC...CACCCACACGGGCCTGCTCCCGCAGACTATGCTCATCACCGACACCACCAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560968.5
CDS-3UTR CAA 90 bp TGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGGTCTCTCGCTCCTCCTaGCTAGGGTTCTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: WHGLRGSHRSKDDFPAPKVSRSS*LGFFCL
Trigger: GAGGCAGAAGAACCCTAGCAAGGAGGAGCGAGAGAC...CTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATGGTCTCTCGCTCCTCCTaGCTAGGGTTCTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: APVLVNVGPREAGSPGPMVSRSS*LGFFCL
Trigger: GAGGCAGAAGAACCCTAGCAAGGAGGAGCGAGAGAC...CATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000541924.5
CDS-3UTR CAA 90 bp CCCGGCCCTGCTCAGCTGCTCGGGCCTTGCTGCCTTGTGAGCTCAGCTACTCCTATGCATTCCGCCCTATaGCACTCCTCCACTAGCGTC +
Preference number: 5 (lower is better)
Translates to: PGPAQLLGPCCLVSSATPMHSAL*HSSTSV
Trigger: GACGCTAGTGGAGGAGTGCAATAGGGCGGAATGCAT...AGGAGTAGCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGAGCAGGGCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp AGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGCCCGTGGGGGACACTaGGTGGAGGGGTGTAGACAC +
Preference number: 5 (lower is better)
Translates to: RFSAAGPGMWDHACPGFTARGGH*VEGCRH
Trigger: GTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGC...TGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CAA 90 bp CCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGCCCGTGGGGGACACTaGGTGGAGGGGTGTAGACAC +
Preference number: 5 (lower is better)
Translates to: PVGTLVTEQGHADPGPLRARGGH*VEGCRH
Trigger: GTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGC...TCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CAA 90 bp CATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGTTCTGGGGCTGCTGGTaGAGGCCTGGGGATGTCTGC +
Preference number: 5 (lower is better)
Translates to: HGGHEGALGHMALHRWHEFWGCW*RPGDVC
Trigger: GCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAA...CTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CAA 90 bp AGCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATTTCTGGGGCTGCTGGTaGAGGCCTGGGGATGTCTGC +
Preference number: 5 (lower is better)
Translates to: SHGGHEGALGHMALHRWHFWGCW*RPGDVC
Trigger: GCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAA...ATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGCTGCTGCCCATGCTGTaGATGACCGGCACACTCTGT +
Preference number: 5 (lower is better)
Translates to: GHEGALGHMALHRWHERLLLPML*MTGTLC
Trigger: ACAGAGTGTGCCGGTCATCAACAGCATGGGCAGCAG...CAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCCTGCTGCCCATGCTGTaGATGACCGGCACACTCTGT +
Preference number: 5 (lower is better)
Translates to: VAMKGLWVTWLCTGGMSGLLPML*MTGTLC
Trigger: ACAGAGTGTGCCGGTCATCAACAGCATGGGCAGCAG...GCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538646.5
ENST00000540108.1
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS-3UTR CAA 90 bp TGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGCCCTGCTGCCCATGCTGTaGATGACCGGCACACTCTGT +
Preference number: 5 (lower is better)
Translates to: WQCSGPQTPQGGCELPSALLPML*MTGTLC
Trigger: ACAGAGTGTGCCGGTCATCAACAGCATGGGCAGCAG...GGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp TGGCTGGGCTCCAGGCCCGTGGGGGACACTTGGTGGAGGGGTGTAGACACTGTCTGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGAC +
Preference number: 5 (lower is better)
Translates to: WLGSRPVGDTWWRGVDTVCHEQA*LLALHD
Trigger: GTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCA...GACAGTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CAA 90 bp GTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATAGGCCCAGGCTGTGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGAC +
Preference number: 5 (lower is better)
Translates to: VWLPEWCSGPRALHRPRLCHEQA*LLALHD
Trigger: GTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCA...CAGCCTGGGCCTATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTTGGACTTGGCACGGGTaGCGAGGCTCCCACAGGAGT +
Preference number: 5 (lower is better)
Translates to: HADPGPLRAQQVTATQACWTWHG*RGSHRS
Trigger: ACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCA...ACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp AGCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATTGGACTTGGCACGGGTaGCGAGGCTCCCACAGGAGT +
Preference number: 5 (lower is better)
Translates to: SHGGHEGALGHMALHRWHWTWHG*RGSHRS
Trigger: ACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCA...ATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CAA 90 bp ACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCCTGATGTGGGACCATGCTaGTCCTGGGTTCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: TSQPRSSLPSRGRRPGWPDVGPC*SWVHRL
Trigger: GAGCCTGTGAACCCAGGACAAGCATGGTCCCACATC...AGGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTGGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGACTGGACCTTACCTGCTaGGTGGGCGTGAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PVGTLVTEQGHADPGPLRLDLTC*VGVRLA
Trigger: GGCCAGCCTCACGCCCACCAAGCAGGTAAGGTCCAG...TCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541395.5
CDS-3UTR CAA 90 bp ACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACGACTGGATCAGTGCCTCTTaGCTCAGCCCTGACTCGAGC +
Preference number: 5 (lower is better)
Translates to: TRTWTWHGLRGSHRSKDDWISAS*LSPDSS
Trigger: GCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCCA...GTCGTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACCCGCAGGACTCCCCCTaGTCCAGGGGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: YTPRHALGICSHKQSCTHPQDSP*SRGPSP
Trigger: TGGAGAAGGCCCCCTGGACAAGGGGGAGTCCTGCGG...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACGTCTCCCCCAGCCCATaGGGCAGCTCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: YTPRHALGICSHKQSCTHVSPSP*GSSASS
Trigger: GGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGAC...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp CCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACAGGAGTAAGGACTTCATGGGAGTGCCCTaGTTGAGGTGTTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: PTRTWTWHGLRGSHRSKDFMGVP*LRCWDR
Trigger: CCTGTCCCAACACCTCAACAAGGGCACTCCCATGAA...GTCCTTACTCCTGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp TGGCAGTGCTCAGGACCTCAGACTCCTCAGGGTGGCTGCGAACTGCCCTCAGCCTTCCTCCGCCCCTTCTaGGTTGGTAGCTCATCACCT +
Preference number: 5 (lower is better)
Translates to: WQCSGPQTPQGGCELPSAFLRPF*VGSSSP
Trigger: AGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGAA...GGCTGAGGGCAGTTCGCAGCCACCCTGAGGAGTCTGAGGTCCTGAGCACTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAACCTCCGTGACGAGGTaGGAGCCCAGCCCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: RYTPRHALGICSHKQSCTTSVTR*EPSPCA
Trigger: GGCACAGGGGCTGGGCTCCAACCTCGTCACGGAGGT...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp GGCCAGGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGACCTCCGTGACGAGGTaGGAGCCCAGCCCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: GQAGLRGMMLLGTNTGKLTSVTR*EPSPCA
Trigger: GGCACAGGGGCTGGGCTCCAACCTCGTCACGGAGGT...CAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CAA 90 bp CCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTGTCCTGAGAAGGGACCGCCGCTGCTaGAGGGTACTTCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: PGPLRAQQVTATQACVLRRDRRC*RVLLQS
Trigger: AGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCT...TCTCAGGACACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CAA 90 bp GGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCATTCTGGGGCTGCTGGTaGAGGCCTGGGGATGTCTGC +
Preference number: 5 (lower is better)
Translates to: GCGTMLVLGSQAPLSLLAFWGCW*RPGDVC
Trigger: GCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAA...TGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GGTTGCGAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTTCGATGACGCTGTGGTaGGATGGCAGCAGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: GCEAPTGVRTTSQPRSSLSMTLW*DGSRWL
Trigger: GAGCCACCTGCTGCCATCCAACCACAGCGTCATCGA...AAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTCGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CACGCTGATCCAGGGCCTCTCAGAGCTCAGCAGGTCACAGCTACACAGGCCTGTTCGATGACGCTGTGGTaGGATGGCAGCAGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: HADPGPLRAQQVTATQACSMTLW*DGSRWL
Trigger: GAGCCACCTGCTGCCATCCAACCACAGCGTCATCGA...ACAGGCCTGTGTAGCTGTGACCTGCTGAGCTCTGAGAGGCCCTGGATCAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp TTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCGATGACGCTGTGGTaGGATGGCAGCAGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: FSAAGPGMWDHACPGFTGSMTLW*DGSRWL
Trigger: GAGCCACCTGCTGCCATCCAACCACAGCGTCATCGA...GCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCGGTGGGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGATCAGCTGCTCGGGCCTaGCTGCCTTGTGAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: PVGTLVTEQGHADPGPLRSAARA*LPCELS
Trigger: GCTGAGCTCACAAGGCAGCAAGGCCCGAGCAGCTGA...TCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACCCACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp AGGTTGGTGGTGTCGGTGATGAGCATAGTCTGCGGGAGCAGGCCCGTGTGGGTGGATGTGGGACCATGCTaGTCCTGGGTTCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: RLVVSVMSIVCGSRPVWVDVGPC*SWVHRL
Trigger: GAGCCTGTGAACCCAGGACAAGCATGGTCCCACATC...CACCCACACGGGCCTGCTCCCGCAGACTATGCTCATCACCGACACCACCAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS CCA 90 bp CCACCTCTCCTTCCCAGAGCCCGTGGTTTGGAGGAGGGGGCAGGGTaGTCAGGAAACAGCCCTCCACTGGGACCTGCCACTAATTTAAGT +
Preference number: 5 (lower is better)
Translates to: PPLLPRARGLEEGAG*SGNSPPLGPATNLS
Trigger: ACTTAAATTAGTGGCAGGTCCCAGTGGAGGGCTGTTTCCTGACCACCCTGCCCCCTCCTCCAAACCACGGGCTCTGGGAAGGAGAGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402929.5
CDS-3UTR CAA 90 bp CTGCATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGCCGCAGGACTCCCCCTaGTCCAGGGGGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LHPLTANLYHHLLLCGAQPQDSP*SRGPSP
Trigger: TGGAGAAGGCCCCCTGGACAAGGGGGAGTCCTGCGG...CTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CAA 90 bp AAGGCCAGGTTCTCAGCAGCAGGCCCAGGGATGTGGGACCATGCTTGTCCTGGGTTCCTCCGCCCCTTCTaGGTTGGTAGCTCATCACCT +
Preference number: 5 (lower is better)
Translates to: KARFSAAGPGMWDHACPGFLRPF*VGSSSP
Trigger: AGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGAA...CCCAGGACAAGCATGGTCCCACATCCCTGGGCCTGCTGCTGAGAACCTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACGATGCTGGGCCCCACTaGAAACGGTTCCTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: YTPRHALGICSHKQSCTHDAGPH*KRFLRP
Trigger: GGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATC...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp GAGGCTCCCACAGGAGTAAGGACGACTTCCCAGCCCCGAAGTAGCCTTCCCAGTGTCTCTCGCTCCTCCTaGCTAGGGTTCTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: EAPTGVRTTSQPRSSLPSVSRSS*LGFFCL
Trigger: GAGGCAGAAGAACCCTAGCAAGGAGGAGCGAGAGAC...ACTGGGAAGGCTACTTCGGGGCTGGGAAGTCGTCCTTACTCCTGTGGGAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp TCAGCCAGCCAGGCCCCCAGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCGTCTCTCGCTCCTCCTaGCTAGGGTTCTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SASQAPRLLSVSPVHTGSVSRSS*LGFFCL
Trigger: GAGGCAGAAGAACCCTAGCAAGGAGGAGCGAGAGAC...GCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGGCTGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAATGCATTCCGCCCTATaGCACTCCTCCACTAGCGTC +
Preference number: 5 (lower is better)
Translates to: PMTRVEAPVLVNVGPREAMHSAL*HSSTSV
Trigger: GACGCTAGTGGAGGAGTGCAATAGGGCGGAATGCAT...TGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CAA 90 bp GCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCACCTCCGTGACGAGGTaGGAGCCCAGCCCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: ADTLNHGNTLVPETHADCTSVTR*EPSPCA
Trigger: GGCACAGGGGCTGGGCTCCAACCTCGTCACGGAGGT...GCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538646.5
CDS-3UTR CAA 90 bp CCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTACCTCCGTGACGAGGTaGGAGCCCAGCCCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: PPSVPSKKTVSHEAATVPTSVTR*EPSPCA
Trigger: GGCACAGGGGCTGGGCTCCAACCTCGTCACGGAGGT...AGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CAA 90 bp CCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCCGGAAGGCTTCTTCTTaGCGCCGGTTGGCAAACCAG +
Preference number: 5 (lower is better)
Translates to: PESQGRRGTLKARFSAAGRKASS*RRLANQ
Trigger: CTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCCG...GCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CAA 90 bp AGGGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGAGGGACCGCCGCTGCTaGAGGGTACTTCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: RDVGPCLSWVHRLLCPSWRDRRC*RVLLQS
Trigger: AGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCT...CCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CAA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAGCCCGTGGGGGACACTaGGTGGAGGGGTGTAGACAC +
Preference number: 5 (lower is better)
Translates to: RYTPRHALGICSHKQSCTARGGH*VEGCRH
Trigger: GTGTCTACACCCCTCCACCAAGTGTCCCCCACGGGC...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACTTCTGGGGCTGCTGGTaGAGGCCTGGGGATGTCTGC +
Preference number: 5 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHFWGCW*RPGDVC
Trigger: GCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAA...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp GGTGATGGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGGAGGTGAAGACCTGCTaGGTGGGCGTGAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GDGVSTNGMWVTSWKELGEVKTC*VGVRLA
Trigger: GGCCAGCCTCACGCCCACCAAGCAGGTCTTCACCTC...CCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCCATCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CAA 90 bp CTTGCTAGGGTTCTTCTGCCTCTCATAGGCCTGGAACAGGATCTGCTGGGATGCCACCAGGACCTGGACTaGGCACGGGTTGCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LARVLLPLIGLEQDLLGCHQDLD*ARVARL
Trigger: GAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTG...GCATCCCAGCAGATCCTGTTCCAGGCCTATGAGAGGCAGAAGAACCCTAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CAA 90 bp GGTCACCCCAGGCCTTTTCCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCCCTGCATGGGTGAACTaGCAGAAGGGTCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: GHPRPFPESQGRRGTLKAPAWVN*QKGLHH
Trigger: GTGGTGGAGACCCTTCTGCAAGTTCACCCATGCAGG...GGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGGAAAAGGCCTGGGGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS-3UTR CAA 90 bp ACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCAGGCTCACATAGCGCACACCTATaGCACTCCTCCACTAGCGTC +
Preference number: 5 (lower is better)
Translates to: TRVEAPVLVNVGPREAGSHSAHL*HSSTSV
Trigger: GACGCTAGTGGAGGAGTGCAATAGGTGTGCGCTATG...TGAGCCTGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS-3UTR CAA 90 bp TGTCCTGAGAAGTGTGGCTGCCAGAGTGGTGTAGCGGTCCCAGGGCTCTCCATATGGATCAGTGCCTCTTaGCTCAGCCCTGACTCGAGC +
Preference number: 5 (lower is better)
Translates to: CPEKCGCQSGVAVPGLSIWISAS*LSPDSS
Trigger: GCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCCA...TATGGAGAGCCCTGGGACCGCTACACCACTCTGGCAGCCACACTTCTCAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp TCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCGTCTCCCCCAGCCCATaGGGCAGCTCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SITETHLSQRHMQTAMPAVSPSP*GSSASS
Trigger: GGAGCTGGCTGAGCTGCCCAATGGGCTGGGGGAGAC...GGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CAA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACGACAGGTGGGACTGGTaGAGGCCAGTGGTATCGACC +
Preference number: 5 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHDRWDW*RPVVST
Trigger: GGTCGATACCACTGGCCTCAACCAGTCCCACCTGTC...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp AGCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATTTCATGGGAGTGCCCTaGTTGAGGTGTTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: SHGGHEGALGHMALHRWHFMGVP*LRCWDR
Trigger: CCTGTCCCAACACCTCAACAAGGGCACTCCCATGAA...ATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GGATGTGGGACCATGCTTGTCCTGGGTTCACAGGCTCCTTTGTCCCTCCTGGCATCCGCCCCTTCTTGGTaGGTAGCTCATCACCTGTGG +
Preference number: 5 (lower is better)
Translates to: GCGTMLVLGSQAPLSLLASAPSW*VAHHLW
Trigger: CCACAGGTGATGAGCTACCAACCAAGAAGGGGCGGA...TGCCAGGAGGGACAAAGGAGCCTGTGAACCCAGGACAAGCATGGTCCCACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp AGCCATGGTGGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATTTCCTCCGCCCCTTCTaGGTTGGTAGCTCATCACCT +
Preference number: 5 (lower is better)
Translates to: SHGGHEGALGHMALHRWHFLRPF*VGSSSP
Trigger: AGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGAA...ATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCCACCATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540108.1
ENST00000541924.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTCATGACCTCCGTGACGAGGTaGGAGCCCAGCCCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: GLRGMMLLGTNTGKLEVMTSVTR*EPSPCA
Trigger: GGCACAGGGGCTGGGCTCCAACCTCGTCACGGAGGT...CATGACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CAA 90 bp CCTGAATCCCAGGGTAGACGCGGTACACTGAAGGCCAGGTTCTCAGCAGCAGGCTGCCATGAACAGGCTTaGCTCCTAGCTCTCCACGAC +
Preference number: 5 (lower is better)
Translates to: PESQGRRGTLKARFSAAGCHEQA*LLALHD
Trigger: GTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCA...GCCTGCTGCTGAGAACCTGGCCTTCAGTGTACCGCGTCTACCCTGGGATTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp AGGCTTCTGAGTGTTAGTCCTGTCCACACAGGTAGCTCCTGTGCCCTGGGGTCAGGCCCGGTGGGTACATaGGTGACAGAACAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: RLLSVSPVHTGSSCALGSGPVGT*VTEQGH
Trigger: GTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCC...TGACCCCAGGGCACAGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS CCA 90 bp TCACTAAGGGACCGCCGCTGCTTGAGGGTACTTCTGCAGTCTCACTaGTCGCAGGCTGTCCATAGCGCACACCTATTGCACTCCTCCACT +
Preference number: 5 (lower is better)
Translates to: SLRDRRCLRVLLQSH*SQAVHSAHLLHSST
Trigger: AGTGGAGGAGTGCAATAGGTGTGCGCTATGGACAGCCTGCGACCAGTGAGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCTTAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS-3UTR CAA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACGTCTCTCGCTCCTCCTaGCTAGGGTTCTTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHVSRSS*LGFFCL
Trigger: GAGGCAGAAGAACCCTAGCAAGGAGGAGCGAGAGAC...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACCGGAAGGCTTCTTCTTaGCGCCGGTTGGCAAACCAG +
Preference number: 5 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHRKASS*RRLANQ
Trigger: CTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCCG...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp TCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGACCCCCTCCTGCGGAAGGCTTCTTCTTaGCGCCGGTTGGCAAACCAG +
Preference number: 5 (lower is better)
Translates to: SYICHEQALLLALHDPLLRKASS*RRLANQ
Trigger: CTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCCG...CAGGAGGGGGTCGTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CAA 90 bp GGTACATTGGTGACAGAACAAGGCCACGCTGATCCAGGGCCTCTCAGAGCTCAGCGGAAGGCTTCTTCTTaGCGCCGGTTGGCAAACCAG +
Preference number: 5 (lower is better)
Translates to: GTLVTEQGHADPGPLRAQRKASS*RRLANQ
Trigger: CTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCCG...CTGAGCTCTGAGAGGCCCTGGATCAGCGTGGCCTTGTTCTGTCACCAATGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
CDS-3UTR CAA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACAAGGGACCGCCGCTGCTaGAGGGTACTTCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: RYTPRHALGICSHKQSCTRDRRC*RVLLQS
Trigger: AGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCT...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp CCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTTTCTGGGGCTGCTGGTaGAGGCCTGGGGATGTCTGC +
Preference number: 5 (lower is better)
Translates to: PPSVPSKKTVSHEAATVPFWGCW*RPGDVC
Trigger: GCAGACATCCCCAGGCCTCAACCAGCAGCCCCAGAA...AGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACCTGCTGCCCATGCTGTaGATGACCGGCACACTCTGT +
Preference number: 5 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHLLPML*MTGTLC
Trigger: ACAGAGTGTGCCGGTCATCAACAGCATGGGCAGCAG...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp AGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCCACGGCCCGGTGGGTACATaGGTGACAGAACAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: SDSPSYICHEQALLLALHGPVGT*VTEQGH
Trigger: GTGGCCTTGTTCTGTCACCAATGTACCCACCGGGCC...GTGGAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GGCCATGAAGGGGCTCTGGGTCACATGGCTCTGCACAGGTGGCATGAGCGGCTGTTTCCCCTGCATCCATaGACAGCCAACCTCTATCAT +
Preference number: 5 (lower is better)
Translates to: GHEGALGHMALHRWHERLFPLHP*TANLYH
Trigger: ATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAA...CAGCCGCTCATGCCACCTGTGCAGAGCCATGTGACCCAGAGCCCCTTCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CAA 90 bp CATCCATTGACAGCCAACCTCTATCATCATCTCCTGCTGTGTGGGGCACAGGGCCTGGTTGAGGCCTCTTaGCTCAGCCCTGACTCGAGC +
Preference number: 5 (lower is better)
Translates to: HPLTANLYHHLLLCGAQGLVEAS*LSPDSS
Trigger: GCTCGAGTCAGGGCTGAGCAAAGAGGCCTCAACCAG...GCCCTGTGCCCCACACAGCAGGAGATGATGATAGAGGTTGGCTGTCAATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544574.5
CDS-3UTR CAA 90 bp CTGGCCTGCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCTTCTGGGGCTGCTGGTaGAGGCCTCTTTGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LACRHPQSRKHTCPRDTCFWGCW*RPLCSA
Trigger: GGCTGAGCAAAGAGGCCTCAACCAGCAGCCCCAGAA...GCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGCAGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544574.5
CDS-3UTR CAA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACATGGATCAGTGCCTCTTaGCTCAGCCCTGACTCGAGC +
Preference number: 5 (lower is better)
Translates to: RYTPRHALGICSHKQSCTWISAS*LSPDSS
Trigger: GCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCCA...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp ACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCAGGCACCCCTTTTGGATCAGTGCCTCTTaGCTCAGCCCTGACTCGAGC +
Preference number: 5 (lower is better)
Translates to: THLSQRHMQTAMPARHPFWISAS*LSPDSS
Trigger: GCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCCA...AAAGGGGTGCCTGGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CAA 90 bp CTGGCCTGCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCTGGATCAGTGCCTCTTaGCTCAGCCCTGACTCGAGC +
Preference number: 5 (lower is better)
Translates to: LACRHPQSRKHTCPRDTCWISAS*LSPDSS
Trigger: GCTCGAGTCAGGGCTGAGCAAAGAGGCACTGATCCA...GCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGCAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CAA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACTCCGCCCCTTCTTGGTaGGTAGCTCATCACCTGTGG +
Preference number: 5 (lower is better)
Translates to: YTPRHALGICSHKQSCTHSAPSW*VAHHLW
Trigger: CCACAGGTGATGAGCTACCAACCAAGAAGGGGCGGA...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACATCCGCCCCTTCTTGGTaGGTAGCTCATCACCTGTGG +
Preference number: 5 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATSAPSW*VAHHLW
Trigger: CCACAGGTGATGAGCTACCAACCAAGAAGGGGCGGA...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGATGCTGGGCCCCACTaGAAACGGTTCCTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: DTLNHGNTLVPETHADCNDAGPH*KRFLRP
Trigger: GGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATC...ATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS-3UTR CAA 90 bp CTGGCCTGCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCCTGCTGCCCATGCTGTaGATGACCGGCACACTCTGT +
Preference number: 5 (lower is better)
Translates to: LACRHPQSRKHTCPRDTCLLPML*MTGTLC
Trigger: ACAGAGTGTGCCGGTCATCAACAGCATGGGCAGCAG...GCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGCAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CAA 90 bp AGGCCGCCCCCTTCAGTTCCAAGTAAGAAGACTGTATCCCACGAAGCAGCGACACTGCTGCCCATGCTGTaGATGACCGGCACACTCTGT +
Preference number: 5 (lower is better)
Translates to: RPPPSVPSKKTVSHEAATLLPML*MTGTLC
Trigger: ACAGAGTGTGCCGGTCATCAACAGCATGGGCAGCAG...TGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTGGAACTGAAGGGGGCGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GGTGATGGGGTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGGATGTGGGACCATGCTaGTCCTGGGTTCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: GDGVSTNGMWVTSWKELGDVGPC*SWVHRL
Trigger: GAGCCTGTGAACCCAGGACAAGCATGGTCCCACATC...CCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGACCCCATCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp AGCAGCGACAGTCCCTCCTACATCTGCCATGAACAGGCTTTGCTCCTAGCTCTCGATGTGGGACCATGCTaGTCCTGGGTTCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: SSDSPSYICHEQALLLALDVGPC*SWVHRL
Trigger: GAGCCTGTGAACCCAGGACAAGCATGGTCCCACATC...GAGAGCTAGGAGCAAAGCCTGTTCATGGCAGATGTAGGAGGGACTGTCGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGACAGGTGGGACTGGTaGAGGCCAGTGGTATCGACC +
Preference number: 5 (lower is better)
Translates to: PSITETHLSQRHMQTAMPDRWDW*RPVVST
Trigger: GGTCGATACCACTGGCCTCAACCAGTCCCACCTGTC...AGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CAA 90 bp CCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGGACAGGTGGGACTGGTaGAGGCCAGTGGTATCGACC +
Preference number: 5 (lower is better)
Translates to: PQSRKHTCPRDTCRLQCLDRWDW*RPVVST
Trigger: GGTCGATACCACTGGCCTCAACCAGTCCCACCTGTC...CAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CAA 90 bp CGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACATTCATGGGAGTGCCCTaGTTGAGGTGTTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: RYTPRHALGICSHKQSCTFMGVP*LRCWDR
Trigger: CCTGTCCCAACACCTCAACAAGGGCACTCCCATGAA...TGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACTTCCTCCGCCCCTTCTaGGTTGGTAGCTCATCACCT +
Preference number: 5 (lower is better)
Translates to: YTPRHALGICSHKQSCTHFLRPF*VGSSSP
Trigger: AGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGAA...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACATGCATTCCGCCCTATaGCACTCCTCCACTAGCGTC +
Preference number: 5 (lower is better)
Translates to: YTPRHALGICSHKQSCTHMHSAL*HSSTSV
Trigger: GACGCTAGTGGAGGAGTGCAATAGGGCGGAATGCAT...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp TGCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGAGGGACCGCCGCTGCTaGAGGGTACTTCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: CRHPQSRKHTCPRDTCRLRDRRC*RVLLQS
Trigger: AGACTGCAGAAGTACCCTCAAGCAGCGGCGGTCCCT...CAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538646.5
ENST00000541924.5
CDS-3UTR CAA 90 bp GTCAGTACAAATGGCATGTGGGTCACTAGCTGGAAGGAGTTGGGGCAGGAAGGATTCCTCCGCCCCTTCTaGGTTGGTAGCTCATCACCT +
Preference number: 5 (lower is better)
Translates to: VSTNGMWVTSWKELGQEGFLRPF*VGSSSP
Trigger: AGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGAA...TCCTTCCTGCCCCAACTCCTTCCAGCTAGTGACCCACATGCCATTTGTACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GGCTGGCCTCAGAGGCATGATGCTCTTGGGAACAAATACAGGAAAGCTGGAGGTATGCATTCCGCCCTATaGCACTCCTCCACTAGCGTC +
Preference number: 5 (lower is better)
Translates to: GWPQRHDALGNKYRKAGGMHSAL*HSSTSV
Trigger: GACGCTAGTGGAGGAGTGCAATAGGGCGGAATGCAT...ACCTCCAGCTTTCCTGTATTTGTTCCCAAGAGCATCATGCCTCTGAGGCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTCGGAAGGCTTCTTCTTaGCGCCGGTTGGCAAACCAG +
Preference number: 5 (lower is better)
Translates to: PSITETHLSQRHMQTAMPRKASS*RRLANQ
Trigger: CTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCCG...AGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538646.5
CDS-3UTR CAA 90 bp AGAGGAGCTGCCCCACCAGGACCTGGACTTGGCACGGGTTGCGAGGCTCCCACACCACCGCATTTCTCCTaGACTTTACTAAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: RGAAPPGPGLGTGCEAPTPPHFS*TLLKVK
Trigger: TTTAACTTTTAGTAAAGTCAAGGAGAAATGCGGTGG...TGTGGGAGCCTCGCAACCCGTGCCAAGTCCAGGTCCTGGTGGGGCAGCTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GAGCATAGTCTGCGGGAGCAGGCCCGTGTGGGTGTACTGGGCCACCTCGGGCTTCCACCGCATTTCTCCTaGACTTTACTAAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: EHSLREQARVGVLGHLGLPPHFS*TLLKVK
Trigger: TTTAACTTTTAGTAAAGTCAAGGAGAAATGCGGTGG...AAGCCCGAGGTGGCCCAGTACACCCACACGGGCCTGCTCCCGCAGACTATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CAA 90 bp CAAGTAAGAAGACTGTATCCCACGAAGCAGCGACAGTCCCTCCTACATCTGCCATTCATGGGAGTGCCCTaGTTGAGGTGTTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: QVRRLYPTKQRQSLLHLPFMGVP*LRCWDR
Trigger: CCTGTCCCAACACCTCAACAAGGGCACTCCCATGAA...TGGCAGATGTAGGAGGGACTGTCGCTGCTTCGTGGGATACAGTCTTCTTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257555.11
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp CCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTTTCCTCCGCCCCTTCTaGGTTGGTAGCTCATCACCT +
Preference number: 5 (lower is better)
Translates to: PSITETHLSQRHMQTAMPFLRPF*VGSSSP
Trigger: AGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGAA...AGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS-3UTR CAA 90 bp ACTTCCCAGCCCCGAAGTAGCCTTCCCAGTAGAGGCAGGAGGCCAGGCTGGCCTCCACCGCATTTCTCCTaGACTTTACTAAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: TSQPRSSLPSRGRRPGWPPPHFS*TLLKVK
Trigger: TTTAACTTTTAGTAAAGTCAAGGAGAAATGCGGTGG...AGGCCAGCCTGGCCTCCTGCCTCTACTGGGAAGGCTACTTCGGGGCTGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257555.11
ENST00000540108.1
ENST00000541395.5
ENST00000560968.5
CDS-3UTR CAA 90 bp GCCGATGACCAGGGTGGAGGCACCTGTGTTGGTGAACGTAGGACCCAGGGAGGCCCACCGCATTTCTCCTaGACTTTACTAAAAGTTAAA +
Preference number: 5 (lower is better)
Translates to: ADDQGGGTCVGERRTQGGPPHFS*TLLKVK
Trigger: TTTAACTTTTAGTAAAGTCAAGGAGAAATGCGGTGG...GCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540108.1
ENST00000560968.5
CDS-3UTR CAA 90 bp CCGATACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACTTTCCCCTGCATCCATaGACAGCCAACCTCTATCAT +
Preference number: 5 (lower is better)
Translates to: PIHTQTRTRDLLTQAVVHFPLHP*TANLYH
Trigger: ATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAA...GTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp TACACACCCAGACACGCACTAGGGATCTGCTCACACAAGCAGTCGTGCACACACATCACGGAAACACACTaGTCCCAGAGACACATGCAG +
Preference number: 5 (lower is better)
Translates to: YTPRHALGICSHKQSCTHITETH*SQRHMQ
Trigger: CTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGAT...GTGTGTGCACGACTGCTTGTGTGAGCAGATCCCTAGTGCGTGTCTGGGTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400024.6
CDS-3UTR CAA 90 bp CTGGCCTGCAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCATCACGGAAACACACTaGTCCCAGAGACACATGCAG +
Preference number: 5 (lower is better)
Translates to: LACRHPQSRKHTCPRDTCITETH*SQRHMQ
Trigger: CTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGAT...GCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTGCAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CAA 90 bp GCCAGGCACCCCTTTCCCCTGCATCCATTGACAGCCAACCTCTATCATCATCTCTTTCCCCTGCATCCATaGACAGCCAACCTCTATCAT +
Preference number: 5 (lower is better)
Translates to: ARHPFPLHPLTANLYHHLFPLHP*TANLYH
Trigger: ATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAA...GAGATGATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAAGGGGTGCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CAA 90 bp CACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCATCACGGAAACACACTaGTCCCAGAGACACATGCAG +
Preference number: 5 (lower is better)
Translates to: HPQSRKHTCPRDTCRLQCITETH*SQRHMQ
Trigger: CTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGAT...GCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CAA 90 bp TCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCAATGCCTGCCATCACGGAAACACACTaGTCCCAGAGACACATGCAG +
Preference number: 5 (lower is better)
Translates to: SITETHLSQRHMQTAMPAITETH*SQRHMQ
Trigger: CTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGAT...GGCAGGCATTGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS-3UTR CAA 90 bp CAGACACCCTCAATCACGGAAACACACTTGTCCCAGAGACACATGCAGACTGCATTTCCCCTGCATCCATaGACAGCCAACCTCTATCAT +
Preference number: 5 (lower is better)
Translates to: QTPSITETHLSQRHMQTAFPLHP*TANLYH
Trigger: ATGATAGAGGTTGGCTGTCAATGGATGCAGGGGAAA...TGCAGTCTGCATGTGTCTCTGGGACAAGTGTGTTTCCGTGATTGAGGGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
CDS GCA 90 bp TCCCCTCTCCTAGCAGCTCCTTATCTATCTTATGTACTGGGCTTCTaGATAATTGTACCTGCAAATAAGGGCTTTCTGGGCTTAATTTTT +
Preference number: 5 (lower is better)
Translates to: SPLLAAPYLSYVLGF*IIVPANKGFLGLIF
Trigger: AAAAATTAAGCCCAGAAAGCCCTTATTTGCAGGTACAATTATGCAGAAGCCCAGTACATAAGATAGATAAGGAGCTGCTAGGAGAGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402929.5
CDS CCA 72 bp CCCGGGTCCACCACGCTAGCCGCCTCCCCCACCGCGTaGGTTGCGTTTGCCTGCCGGCCGGCAGACACAAAC +
Preference number: 6 (lower is better)
Translates to: PGSTTLAASPTA*VAFACRPADTN
Trigger: GTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGCGGCTAGCGTGGTGGACCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538626.2
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS TCA 72 bp GGCCAGCAGGCCTGGACCTTACCTGCTTGGTGGGCGTaGGGCTGGCCAGGGCGCTCAGGTTGGTGGTGTCGG +
Preference number: 6 (lower is better)
Translates to: GQQAWTLPAWWA*GWPGRSGWWCR
Trigger: CCGACACCACCAACCTGAGCGCCCTGGCCAGCCTCACGCCCACCAAGCAGGTAAGGTCCAGGCCTGCTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541395.5
CDS CAA 72 bp GCCAAGGGAGGGCCAGCAGGCCTGGACCTTACCTGCTaGGTGGGCGTGAGGCTGGCCAGGGCGCTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: AKGGPAGLDLTC*VGVRLARALRL
Trigger: CAACCTGAGCGCCCTGGCCAGCCTCACGCCCACCAAGCAGGTAAGGTCCAGGCCTGCTGGCCCTCCCTTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541395.5
CDS GCA 72 bp GTCCACCACGCTAGCCGCCTCCCCCACCGCGTGGGTTaGGTTTGCCTGCCGGCCGGCAGACACAAACCAAAC +
Preference number: 6 (lower is better)
Translates to: VHHASRLPHRVG*VCLPAGRHKPN
Trigger: GTTTGGTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGCGGCTAGCGTGGTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538626.2
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS GCA 72 bp CTAGCCGCCTCCCCCACCGCGTGGGTTGCGTTTGCCTaGCGGCCGGCAGACACAAACCAAACTCCTTGCACC +
Preference number: 6 (lower is better)
Translates to: LAASPTAWVAFA*RPADTNQTPCT
Trigger: GGTGCAAGGAGTTTGGTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGCGGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538626.2
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS GCA 72 bp CACGCTAGCCGCCTCCCCCACCGCGTGGGTTGCGTTTaGCTGCCGGCCGGCAGACACAAACCAAACTCCTTG +
Preference number: 6 (lower is better)
Translates to: HASRLPHRVGCV*LPAGRHKPNSL
Trigger: CAAGGAGTTTGGTTTGTGTCTGCCGGCCGGCAGGCAAACGCAACCCACGCGGTGGGGGAGGCGGCTAGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538626.2
ENST00000538646.5
ENST00000541924.5
ENST00000544574.5
ENST00000560968.5
CDS CCA 72 bp GGGTCCTCCTGCAGAAGGGTCTCCACCACGGCTTTCTaGTGGGCCGCCTCCTCAGGGCTGAGGTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GSSCRRVSTTAF*WAASSGLRFSS
Trigger: GCTGGAGAACCTCAGCCCTGAGGAGGCGGCCCACCAGAAAGCCGTGGTGGAGACCCTTCTGCAGGAGGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538646.5
ENST00000541395.5
ENST00000541924.5
ENST00000544413.2
ENST00000560968.5
CDS CAA 90 bp CCCATCCCCACCAGCTTACCGATGACCAGGGTGGAGGCACCTGTGTaGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCAGGCCCGATG +
Preference number: 6 (lower is better)
Translates to: PIPTSLPMTRVEAPV*VNVGPREAGSPGPM
Trigger: CATCGGGCCTGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGGTAAGCTGGTGGGGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402929.5
CDS GCA 72 bp AGCCCTGACTCGAGCAGGGCCGCCAGGAGCTCCGTCTaGAGCTGGCTCAGTTTAGAAACCATGGCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: SPDSSRAARSSV*SWLSLETMARL
Trigger: CAGCCGAGCCATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGCGGCCCTGCTCGAGTCAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538626.2
ENST00000538646.5
ENST00000540108.1
ENST00000541395.5
ENST00000541924.5
ENST00000544413.2
ENST00000544574.5
ENST00000560968.5
CDS CCA 72 bp GACTCGAGCAGGGCCGCCAGGAGCTCCGTCTGCAGCTaGCTCAGTTTAGAAACCATGGCTCGGCTGCCACAG +
Preference number: 6 (lower is better)
Translates to: DSSRAARSSVCS*LSLETMARLPQ
Trigger: CTGTGGCAGCCGAGCCATGGTTTCTAAACTGAGCCAGCTGCAGACGGAGCTCCTGGCGGCCCTGCTCGAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538626.2
ENST00000538646.5
ENST00000540108.1
ENST00000541395.5
ENST00000541924.5
ENST00000544413.2
ENST00000544574.5
ENST00000560968.5
CDS CAA 72 bp AGGGCGGCCCGCTTCTGCGTCTTCATGGGAGTGCCCTaGTTGAGGTGTTGGGACAGGTGGGACTGGTTGAGG +
Preference number: 6 (lower is better)
Translates to: RAARFCVFMGVP*LRCWDRWDWLR
Trigger: CCTCAACCAGTCCCACCTGTCCCAACACCTCAACAAGGGCACTCCCATGAAGACGCAGAAGCGGGCCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000538646.5
ENST00000541395.5
ENST00000541924.5
ENST00000544413.2
ENST00000560968.5
CDS GCA 72 bp ATCACCTGTGGGCTCTTCAATCAGCCCTCCCTGCCCTaGATGGGTGAACTGCTGCGCCACCTCTCGCTGCTT +
Preference number: 6 (lower is better)
Translates to: ITCGLFNQPSLP*MGELLRHLSLL
Trigger: AAGCAGCGAGAGGTGGCGCAGCAGTTCACCCATGCAGGGCAGGGAGGGCTGATTGAAGAGCCCACAGGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000541395.5
ENST00000541924.5
ENST00000544413.2
ENST00000560968.5
CDS CAA 72 bp ACCAGCTTACCGATGACCAGGGTGGAGGCACCTGTGTaGGTGAACGTAGGACCCAGGGAGGCAGGCTCACCA +
Preference number: 6 (lower is better)
Translates to: TSLPMTRVEAPV*VNVGPREAGSP
Trigger: TGGTGAGCCTGCCTCCCTGGGTCCTACGTTCACCAACACAGGTGCCTCCACCCTGGTCATCGGTAAGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402929.5
CDS CAA 90 bp TGCTGGGATGCTGGGCCCCACTTGAAACGGTTCCTCCGCCCCTTCTaGGTTGGTAGCTCATCACCTGTGGGCTCTTCAATCAGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: CWDAGPHLKRFLRPF*VGSSSPVGSSISPP
Trigger: GGGAGGGCTGATTGAAGAGCCCACAGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000540108.1
ENST00000541395.5
ENST00000541924.5
ENST00000544413.2
ENST00000560968.5
CDS GCA 72 bp ATCACCTGTGGGCTCTTCAATCAGCCCTCCCTGCCCTaGATGGGTGAACTTGCAGAAGGGTCTCCACCACGG +
Preference number: 6 (lower is better)
Translates to: ITCGLFNQPSLP*MGELAEGSPPR
Trigger: CCGTGGTGGAGACCCTTCTGCAAGTTCACCCATGCAGGGCAGGGAGGGCTGATTGAAGAGCCCACAGGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540108.1
CDS CCA 72 bp GACCGCCGCTGCTTGAGGGTACTTCTGCAGTCTCACTaGTCGCAGGCTGTCCATAGCGCACACCTATTGCAC +
Preference number: 6 (lower is better)
Translates to: DRRCLRVLLQSH*SQAVHSAHLLH
Trigger: GTGCAATAGGTGTGCGCTATGGACAGCCTGCGACCAGTGAGACTGCAGAAGTACCCTCAAGCAGCGGCGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541924.5
CDS CCA 72 bp TCAGCAGGCTGTGGCTGTGATGGGGACACCCCTCTCTaGATGCATTCCGCCCTATTGCACTCCTCCACTAGC +
Preference number: 6 (lower is better)
Translates to: SAGCGCDGDTPL*MHSALLHSSTS
Trigger: GCTAGTGGAGGAGTGCAATAGGGCGGAATGCATCCAGAGAGGGGTGTCCCCATCACAGCCACAGCCTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560968.5
CDS CAA 72 bp GCTGGGCCCCACTTGAAACGGTTCCTCCGCCCCTTCTaGGTTGGTAGCTCATCACCTGTGGGCTCTTCAATC +
Preference number: 6 (lower is better)
Translates to: AGPHLKRFLRPF*VGSSSPVGSSI
Trigger: GATTGAAGAGCCCACAGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000257555.11
ENST00000400024.6
ENST00000402929.5
ENST00000540108.1
ENST00000541395.5
ENST00000541924.5
ENST00000544413.2
ENST00000560968.5
CDS CAA 72 bp TCTTTGTCTAGGCTAGTGGGAGAGGCAGGCGGTGACTaGTTCAAAAGTTGTCAAACTGCGGTTCCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: SLSRLVGEAGGD*FKSCQTAVPWS
Trigger: GCTCCAGGGAACCGCAGTTTGACAACTTTTGAACAAGTCACCGCCTGCCTCTCCCACTAGCCTAGACAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402929.5
CDS CAA 90 bp TCCCTAGGGACTGCTCCAGAATCTCCCTGCCAAGGAAAGATGAGGTaGGGTTTTCCTTACAAGCAAGGACACTCACCAGCTTGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: SLGTAPESPCQGKMR*GFPYKQGHSPAWLL
Trigger: CAGAAGCCAAGCTGGTGAGTGTCCTTGCTTGTAAGGAAAACCCAACCTCATCTTTCCTTGGCAGGGAGATTCTGGAGCAGTCCCTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543255.1
CDS CAA 72 bp CTTAGAAAACATCAGTCCCCCTTACCCTGCTGTAATTaGCCCATAGACCCTTCACCTTCTGAGGTACCACAG +
Preference number: 6 (lower is better)
Translates to: LRKHQSPLPCCN*PIDPSPSEVPQ
Trigger: CTGTGGTACCTCAGAAGGTGAAGGGTCTATGGGCAAATTACAGCAGGGTAAGGGGGACTGATGTTTTCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402929.5
CDS GCA 72 bp CTTCACCTTCTGAGGTACCACAGAATTGATGTATTATaGTTAGTGCCTGCCTCCCTGCTTGAGTTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: LHLLRYHRIDVL*LVPASLLELLR
Trigger: TCTCAGCAACTCAAGCAGGGAGGCAGGCACTAAGCATAATACATCAATTCTGTGGTACCTCAGAAGGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402929.5
CDS CAA 72 bp GATGTATTATGCTTAGTGCCTGCCTCCCTGCTTGAGTaGCTGAGATTTTGGTCTGTTTGGTTCACCCAGGTA +
Preference number: 6 (lower is better)
Translates to: DVLCLVPASLLE*LRFWSVWFTQV
Trigger: TACCTGGGTGAACCAAACAGACCAAAATCTCAGCAACTCAAGCAGGGAGGCAGGCACTAAGCATAATACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402929.5
CDS CAA 90 bp CACAGAATTGATGTATTATGCTTAGTGCCTGCCTCCCTGCTTGAGTaGCTGAGATTTTGGTCTGTTTGGTTCACCCAGGTATCACTGATG +
Preference number: 6 (lower is better)
Translates to: HRIDVLCLVPASLLE*LRFWSVWFTQVSLM
Trigger: CATCAGTGATACCTGGGTGAACCAAACAGACCAAAATCTCAGCAACTCAAGCAGGGAGGCAGGCACTAAGCATAATACATCAATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402929.5
CDS TCA 72 bp TGTTTGGTTCACCCAGGTATCACTGATGTAGCACAGTaGCTGGTCCAGAGTAGGCACTGGATAAATACATGT +
Preference number: 6 (lower is better)
Translates to: CLVHPGITDVAQ*LVQSRHWINTC
Trigger: ACATGTATTTATCCAGTGCCTACTCTGGACCAGTCACTGTGCTACATCAGTGATACCTGGGTGAACCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402929.5