RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HMBS (Homo sapiens)

Ensembl gene IDs: ENSG00000256269

Ensembl transcript IDs: ENST00000392841.1, ENST00000442944.7, ENST00000534956.2, ENST00000535253.5, ENST00000535793.5, ENST00000536185.5, ENST00000536813.6, ENST00000537841.5, ENST00000539045.1, ENST00000542044.5, ENST00000542345.5, ENST00000542729.5, ENST00000542822.5, ENST00000543090.5, ENST00000543543.5, ENST00000543821.5, ENST00000544182.1, ENST00000544360.5, ENST00000544387.5, ENST00000545621.5, ENST00000545901.5, ENST00000546226.5, ENST00000546302.6, ENST00000640813.1, ENST00000648026.1, ENST00000648374.1, ENST00000648488.1, ENST00000649823.1, ENST00000649868.1, ENST00000650101.1, ENST00000650307.1, ENST00000652429.1

Found 1142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAGGGTGCAGGATCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: SGCRICPTRLCQPMR*RPAVARMMALNSCC
Trigger: GCAGCAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGATCCTGCACCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR GCA 90 bp ATGCGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGA +
Preference number: 1 (lower is better)
Translates to: MRCRPAVARMMALNS*CSSSFRSRVLRFPR
Trigger: TCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR GCA 90 bp CGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATA +
Preference number: 1 (lower is better)
Translates to: RCRPAVARMMALNSC*SSSFRSRVLRFPRI
Trigger: TATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR GCA 90 bp ACCATGTGGCTTCCCTGGTCAAGTGTACCTGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGATCTGCCCCACCCGGTTGTGCCAGC +
Preference number: 1 (lower is better)
Translates to: TMWLPWSSVPGPQHT*IPQGAGSAPPGCAS
Trigger: GCTGGCACAACCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAGGTACACTTGACCAGGGAAGCCACATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR CCA 90 bp CGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCAAGGCCCCCTGATGGAAAAACATCC +
Preference number: 1 (lower is better)
Translates to: RDRAAHPPDPRCPGP*LALPRPRPPDGKTS
Trigger: GGATGTTTTTCCATCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR CCA 90 bp GGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTaGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCTC +
Preference number: 1 (lower is better)
Translates to: GQADAQVLGSQLGPS*NVTSSDAYQLWVIL
Trigger: GAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR GCA 90 bp GAGGCCCGGGATGTAGGCACTGGACAGCAGCAACCCAGGCATCTGTaGCCCACAAACCAGTTAATGGGCATCGTTAAGCTGCCGTGCAAC +
Preference number: 1 (lower is better)
Translates to: EARDVGTGQQQPRHL*PTNQLMGIVKLPCN
Trigger: GTTGCACGGCAGCTTAACGATGCCCATTAACTGGTTTGTGGGGCACAGATGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR CCA 90 bp CTGGGGCCCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTaGGTCATCCTCAGGGCCATCTTCATGCTGGGCAGGGACATGGAT +
Preference number: 1 (lower is better)
Translates to: LGPSWNVTSSDAYQL*VILRAIFMLGRDMD
Trigger: ATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGGGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR CCA 90 bp GCTCCTTTGCTCAGCAACAAGTTGGCCAGGCTGATGCCCAAGTTCTaGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGATG +
Preference number: 1 (lower is better)
Translates to: APLLSNKLARLMPKF*AANWGPRGMLRAVM
Trigger: CATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAAAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR TCA 90 bp CCAGGATGTTTTTGGCTCCTTTGCTCAGCAACAAGTTGGCCAGGCTaGTGCCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGT +
Preference number: 1 (lower is better)
Translates to: PGCFWLLCSATSWPG*CPSSGQPTGALVEC
Trigger: ACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR GCA 90 bp AATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGTTCCCACCACACTCTTCTCTGGCAG +
Preference number: 1 (lower is better)
Translates to: NTPELQMRELSLQLG*SSQGAGSHHTLLWQ
Trigger: CTGCCAGAGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
3UTR CCA 90 bp AGGGAAGGCATATGTCACCATGTGGCTTCCCTGGTCAAGTGTACCTaGCCCACAGCATACATGCATTCCTCAGGGTGCAGGATCTGCCCC +
Preference number: 1 (lower is better)
Translates to: REGICHHVASLVKCT*PTAYMHSSGCRICP
Trigger: GGGGCAGATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAGGTACACTTGACCAGGGAAGCCACATGGTGACATATGCCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR CCA 90 bp AGCAACAAGTTGGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAACTaGGGCCCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGT +
Preference number: 1 (lower is better)
Translates to: SNKLARLMPKFWAAN*GPRGMLRAVMPTNC
Trigger: ACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR GCA 90 bp TCCTCAGGGCCATCTTCATGCTGGGCAGGGACATGGATGGTAGCCTaGATGGTCTCTTGTATGCTATCTGAGCCGTCTAGACTCCAGACT +
Preference number: 1 (lower is better)
Translates to: SSGPSSCWAGTWMVA*MVSCMLSEPSRLQT
Trigger: AGTCTGGAGTCTAGACGGCTCAGATAGCATACAAGAGACCATGCAGGCTACCATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR CCA 90 bp TTGGTTGAGAACAAAGGGAAGGCATATGTCACCATGTGGCTTCCCTaGTCAAGTGTACCTGGCCCACAGCATACATGCATTCCTCAGGGT +
Preference number: 1 (lower is better)
Translates to: LVENKGKAYVTMWLP*SSVPGPQHTCIPQG
Trigger: ACCCTGAGGAATGCATGTATGCTGTGGGCCAGGTACACTTGACCAGGGAAGCCACATGGTGACATATGCCTTCCCTTTGTTCTCAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR TCA 90 bp GATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATaGAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAAGGCCCC +
Preference number: 1 (lower is better)
Translates to: DWLHSKAVAWTSLKR*SPHILRRQGSHQGP
Trigger: GGGGCCTTGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
3UTR GCA 90 bp CATCTGTGCCCCACAAACCAGTTAATGGGCATCGTTAAGCTGCCGTaGAACATCCAGGATGTTTTTGGCTCCTTTGCTCAGCAACAAGTT +
Preference number: 1 (lower is better)
Translates to: HLCPTNQLMGIVKLP*NIQDVFGSFAQQQV
Trigger: AACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATGTTGCACGGCAGCTTAACGATGCCCATTAACTGGTTTGTGGGGCACAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR CCA 90 bp ACAAGCTTCTTGGTTGAGAACAAAGGGAAGGCATATGTCACCATGTaGCTTCCCTGGTCAAGTGTACCTGGCCCACAGCATACATGCATT +
Preference number: 1 (lower is better)
Translates to: TSFLVENKGKAYVTM*LPWSSVPGPQHTCI
Trigger: AATGCATGTATGCTGTGGGCCAGGTACACTTGACCAGGGAAGCCACATGGTGACATATGCCTTCCCTTTGTTCTCAACCAAGAAGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR CCA 90 bp GCTATTCTGGGGAAGCAGATGCAGAAGGTTGTGAGACAAGCTTCTTaGTTGAGAACAAAGGGAAGGCATATGTCACCATGTGGCTTCCCT +
Preference number: 1 (lower is better)
Translates to: AILGKQMQKVVRQAS*LRTKGRHMSPCGFP
Trigger: AGGGAAGCCACATGGTGACATATGCCTTCCCTTTGTTCTCAACCAAGAAGCTTGTCTCACAACCTTCTGCATCTGCTTCCCCAGAATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR GCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTaGTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAG +
Preference number: 1 (lower is better)
Translates to: FRTGLLVGLVTFKGC*LDFSKEMKPPHTEE
Trigger: CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
3UTR-3UTR TCA 90 bp CCTACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 2 (lower is better)
Translates to: PTCPTRLCQPMRCRPAVARWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...GGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
3UTR-3UTR GCA 90 bp CCCTACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGC +
Preference number: 2 (lower is better)
Translates to: PYLPHPVVPAHALQASCCALNSC*SSSFRS
Trigger: GCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGC...GCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
3UTR-3UTR CCA 90 bp CAGGCCCTACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 2 (lower is better)
Translates to: QALPAPPGCASPCAAGQLLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...CAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
3UTR-3UTR GCA 90 bp CCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGAATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 2 (lower is better)
Translates to: PAPPGCASPCAAGQLLPGMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...TCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
3UTR-3UTR GCA 90 bp GCATTCCTCAGGGTGCAGGATCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGC +
Preference number: 2 (lower is better)
Translates to: AFLRVQDLPHPVVPAHALALNSC*SSSFRS
Trigger: GCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGC...CAGCGCATGGGCTGGCACAACCGGGTGGGGCAGATCCTGCACCCTGAGGAATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR TCA 90 bp CCTACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: PTCPTRLCQPMRCRPAVAKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...GGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
3UTR-3UTR TCA 90 bp ACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: TCPTRLCQPMRCRPAVARKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
3UTR-3UTR GCA 90 bp GCATTCCTCAGGGTGCAGGATCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 2 (lower is better)
Translates to: AFLRVQDLPHPVVPAHALMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...CAGCGCATGGGCTGGCACAACCGGGTGGGGCAGATCCTGCACCCTGAGGAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR GCA 90 bp CCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 2 (lower is better)
Translates to: PHPVVPAHALQASCCQDDLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...ATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR-3UTR GCA 90 bp CCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGATGCGGCTACTGGCACACTaGAGCCTCCTTCCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: PKFWAANWGPRGMLRAVMRLLAH*SLLPGA
Trigger: GGCACCTGGAAGGAGGCTGCAGTGTGCCAGTAGCCG...CATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR GCA 90 bp CTCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 2 (lower is better)
Translates to: LLLLVQLPKPGVEVSPNTSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...AGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR-3UTR GCA 90 bp TCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 2 (lower is better)
Translates to: SCCSSSFRSRVLRFPRILSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR-3UTR CCA 90 bp CGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGCTGCTCGTCCCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 2 (lower is better)
Translates to: RCRPAVARMMALNSCCSSQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...GGACGAGCAGCAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR-3UTR TCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 2 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR TCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 2 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR TCA 90 bp CCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGATGATCAAGGCCCCAAGGTaGGGCAAATCCCTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: PKFWAANWGPRGMLRAVMIKAPR*GKSLEG
Trigger: GCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGAT...CATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR TCA 90 bp AGATGTCCTGGTCCTTGGCTCGCACTTCCACGCCCAAGGCCCCCTGATGGAAAAAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 2 (lower is better)
Translates to: RCPGPWLALPRPRPPDGKRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...TTTTCCATCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR TCA 90 bp GAACTTTCTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 2 (lower is better)
Translates to: ELSLQLGCSSQGAGSHHTRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...AGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
3UTR-3UTR GCA 90 bp CAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGCCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 2 (lower is better)
Translates to: QPMRCRPAVARMMALNSCLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...GCAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR-3UTR CCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCCCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 2 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR CCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCACCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 2 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR CCA 90 bp CGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTTGGCTCGCACTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 2 (lower is better)
Translates to: RDRAAHPPDPRCPGPWLALFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...TGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR TCA 90 bp AGCAGAGTCTCGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCACGCCCAAGGCCCCCTaGTGGAAAAACATCCTAGGA +
Preference number: 2 (lower is better)
Translates to: SRVSGSCSTPTRSKMSWSTPKAP*WKNILG
Trigger: TCCTAGGATGTTTTTCCATCAGGGGGCCTTGGGCGT...GGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR GCA 90 bp CAGCATACATGCATTCCTCAGGGTGCAGGATCTGCCCCACCCGGTTGTGCCAGCCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 2 (lower is better)
Translates to: QHTCIPQGAGSAPPGCASLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...GCTGGCACAACCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCATGTATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR CCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTCCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR CCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACCCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 2 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR CCA 90 bp GATGCCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTaGGTCATCCTCAGGGCCATC +
Preference number: 2 (lower is better)
Translates to: DAQVLGSQLGPSWNVTSSDAYQL*VILRAI
Trigger: GATGGCCCTGAGGATGACCCACAGTTGGTAGGCATC...ACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR CAA 90 bp CGTGCAACATCCAGGATGTTTTTGGCTCCTTTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAACTGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: RATSRMFLAPLLSNK*ARLMPKFWAANWGP
Trigger: AGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATGTTGCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR TCA 90 bp ACTTTCTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTCTCTAGAGTCTGGCCTCTaGTTCACAATCTTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: TFSAAGLLFAGSWFPPHSLESGL*FTIFPA
Trigger: GGCTGGGAAGATTGTGAATCAGAGGCCAGACTCTAG...AGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649868.1
3UTR-3UTR CCA 90 bp TGGGGCCCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCTGTATGCACGGCTACTaGCACACTGCAGCCTCCTTC +
Preference number: 2 (lower is better)
Translates to: WGPRGMLRAVMPTNCGSSCMHGY*HTAASF
Trigger: GAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACA...GGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR CCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTTCTGGGCAGCCAACTaGGGCCCTCGTGGAATGTTA +
Preference number: 2 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVFWAAN*GPRGML
Trigger: TAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR TCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCAATCCCTGGAAGGCTTaGACCCTGCAGTTCAGTCTC +
Preference number: 2 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVNPWKA*TLQFSL
Trigger: GAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR GCA 90 bp GATGCCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTTCCTTCATAGCTGTATaGACGGCTACTGGCACACTG +
Preference number: 2 (lower is better)
Translates to: DAQVLGSQLGPSWNVTSSSFIAV*TATGTL
Trigger: CAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGA...ACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR TCA 90 bp CCCTGGTCAAGTGTACCTGGCCCACAGCATACATGCATTCCTCAGGGTGCAGGAAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 2 (lower is better)
Translates to: PWSSVPGPQHTCIPQGAGKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...TCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAGGTACACTTGACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR GCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATTCAGGGCCATCTTCATaGTGGGCAGGGACATGGATG +
Preference number: 2 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENSGPSS*WAGTWM
Trigger: CATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGA...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATTTCTGGGCAGCCAACTaGGGCCCTCGTGGAATGTTA +
Preference number: 2 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENFWAAN*GPRGML
Trigger: TAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAA...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR CAA 90 bp GCATCGTTAAGCTGCCGTGCAACATCCAGGATGTTTTTGGCTCCTTaGCTCAGCAACAAGTTGGCCAGGCTGATGCCCAAGTTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: ASLSCRATSRMFLAP*LSNKLARLMPKFWA
Trigger: TGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATGTTGCACGGCAGCTTAACGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR TCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCACTTCTCTAAAGAGATaGAGCCCCCACATACTGAGG +
Preference number: 2 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVTSLKR*SPHILR
Trigger: CCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR GCA 90 bp ACATCCAGGATGTTTTTGGCTCCTTTGCTCAGCAACAAGTTGGCCAGGCTGATGGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGT +
Preference number: 2 (lower is better)
Translates to: TSRMFLAPLLSNKLARLMGRLEP*SSVSRG
Trigger: ACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCC...CATCAGCCTGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR GCA 90 bp GTGAGACAAGCTTCTTGGTTGAGAACAAAGGGAAGGCATATGTCACCATGTGGCATGCATTCCTCAGGGTaGAGGATCTGCCCCACCCGG +
Preference number: 2 (lower is better)
Translates to: VRQASWLRTKGRHMSPCGMHSSG*RICPTR
Trigger: CCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCAT...GCCACATGGTGACATATGCCTTCCCTTTGTTCTCAACCAAGAAGCTTGTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR CCA 90 bp AGCAGAGTCTCGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCGTGAGACAAGCTTCTTaGTTGAGAACAAAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: SRVSGSCSTPTRSKMSWSVRQAS*LRTKGR
Trigger: CCTTCCCTTTGTTCTCAACCAAGAAGCTTGTCTCAC...GGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR GCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGT +
Preference number: 2 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEGRLEP*SSVSRG
Trigger: ACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCC...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR CCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGCCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 2 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR CCA 90 bp CAGGAGGAAGCACAGTGGGCAGGTCCTTCAAGGAGTGAACAACCAGGTCCACTTTCCAATCTTCAGAACTaGGAGCAGCCCAGAAGGAAT +
Preference number: 2 (lower is better)
Translates to: QEEAQWAGPSRSEQPGPLSNLQN*EQPRRN
Trigger: ATTCCTTCTGGGCTGCTCCCAGTTCTGAAGATTGGA...AAGTGGACCTGGTTGTTCACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542822.5
3UTR-3UTR TCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGATCAAGGCCCCAAGGTaGGGCAAATCCCTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEIKAPR*GKSLEG
Trigger: GCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGAT...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR GCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGT +
Preference number: 2 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEGRLEP*SSVSRG
Trigger: ACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCC...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR GCA 90 bp GTTTTTGGCTCCTTTGCTCAGCAACAAGTTGGCCAGGCTGATGCCCAAGTTCTGTCCTTCATAGCTGTATaGACGGCTACTGGCACACTG +
Preference number: 2 (lower is better)
Translates to: VFGSFAQQQVGQADAQVLSFIAV*TATGTL
Trigger: CAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGA...CAGAACTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR GCA 90 bp CCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCTCAGGGACATGGATGGTAGCCTaGATGGTCTCTTGTATGCTA +
Preference number: 2 (lower is better)
Translates to: PRGMLRAVMPTNCGSSSGTWMVA*MVSCML
Trigger: TAGCATACAAGAGACCATGCAGGCTACCATCCATGT...CCCTGAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR CCA 90 bp ACTTTCTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTCTCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 2 (lower is better)
Translates to: TFSAAGLLFAGSWFPPHSLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...AGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
3UTR-3UTR TCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 2 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
3UTR-3UTR GCA 90 bp CGAAGCAGAGTCTCGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 2 (lower is better)
Translates to: RSRVSGSCSTPTRSKMSWSNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...CCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCTGCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR CAA 90 bp CCACACTCTTCTCTGGCAGGGTTTCTAGGGTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCATCATGAGGGTTTTCCCGCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: PHSSLAGFLGSSQQI*GERQQHHEGFPACR
Trigger: TCTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGACCCTAGAAACCCTGCCAGAGAAGAGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
3UTR CAA 90 bp ACAACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCTCCAATCTTCAGAACTGGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: TTRSTSFFSRACSSS*VNRLFSPIFRTGSS
Trigger: GCTGCTCCCAGTTCTGAAGATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
3UTR CAA 90 bp ATTCTGGGGAAGCAGATGCAGAAGGTTGTGAGACAAGCTTCTTGGTaGAGAACAAAGGGAAGGCATATGTCACCATGTGGCTTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: ILGKQMQKVVRQASW*RTKGRHMSPCGFPG
Trigger: ACCAGGGAAGCCACATGGTGACATATGCCTTCCCTTTGTTCTCAACCAAGAAGCTTGTCTCACAACCTTCTGCATCTGCTTCCCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR TCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 2 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
3UTR-3UTR TCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 2 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
3UTR-3UTR TCA 90 bp AAAGACAACAGCATCATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAATTACATCAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 2 (lower is better)
Translates to: KDNSIMRVFPLADGSDGELHQYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAA...TTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649868.1
3UTR-3UTR CCA 90 bp CCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 2 (lower is better)
Translates to: PGVEVSPNTPELQMRELSLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...AGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR-3UTR TCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACAATCCCTGGAAGGCTTaGACCCTGCAGTTCAGTCTC +
Preference number: 2 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDNPWKA*TLQFSL
Trigger: GAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATT...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
3UTR-3UTR CCA 90 bp GTGAGACAAGCTTCTTGGTTGAGAACAAAGGGAAGGCATATGTCACCATGTGGCCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 2 (lower is better)
Translates to: VRQASWLRTKGRHMSPCGLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...GCCACATGGTGACATATGCCTTCCCTTTGTTCTCAACCAAGAAGCTTGTCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR CAA 90 bp AGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTaGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: RTGLLVGLVTFKGCC*DFSKEMKPPHTEEA
Trigger: TGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
3UTR-3UTR GCA 90 bp AACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTTGGTAAACAGTCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 2 (lower is better)
Translates to: NQVHFILLQGMFKLLGKQSNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...CTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
3UTR GCA 72 bp CATTCCTCAGGGTGCAGGATCTGCCCCACCCGGTTGTaGCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGG +
Preference number: 3 (lower is better)
Translates to: HSSGCRICPTRL*QPMRCRPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGATCCTGCACCCTGAGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR GCA 72 bp CCTACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGGATGATGGCACTGAAC +
Preference number: 3 (lower is better)
Translates to: PTCPTRLCQPMR*RPAVARMMALN
Trigger: GTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
3UTR-3UTR CAA 90 bp CCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATTCCGAAGCCGGGTGTaGAGGTTTCCCCGAATACTC +
Preference number: 3 (lower is better)
Translates to: PAPPGCASPCAAGQLLPGFRSRV*RFPRIL
Trigger: GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAA...TCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
3UTR GCA 72 bp AGGATCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGGATGATGGCACTGAAC +
Preference number: 3 (lower is better)
Translates to: RICPTRLCQPMR*RPAVARMMALN
Trigger: GTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR CCA 72 bp GGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCCACGCCCAAGGCCCCC +
Preference number: 3 (lower is better)
Translates to: GSCSTPTRSKMS*SLARTSTPKAP
Trigger: GGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR CCA 72 bp GCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCAAGGCCCCCTGATGGA +
Preference number: 3 (lower is better)
Translates to: AAHPPDPRCPGP*LALPRPRPPDG
Trigger: TCCATCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR GCA 72 bp AGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGG +
Preference number: 3 (lower is better)
Translates to: RPAVARMMALNS*CSSSFRSRVLR
Trigger: CCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR-3UTR CAA 90 bp GGCCCTACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 3 (lower is better)
Translates to: GPTCPTRLCQPMRCRPAVACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...AACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
3UTR GCA 72 bp CTTCCCTGGTCAAGTGTACCTGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGATCTGCCCCACCCGGT +
Preference number: 3 (lower is better)
Translates to: LPWSSVPGPQHT*IPQGAGSAPPG
Trigger: ACCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAGGTACACTTGACCAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR CCA 72 bp TTGGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAACTaGGGCCCTCGTGGAATGTTACGAGCAGTGATGCCT +
Preference number: 3 (lower is better)
Translates to: LARLMPKFWAAN*GPRGMLRAVMP
Trigger: AGGCATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR TCA 72 bp CAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTaGTGCCTACCAACTGTGGGTCATCCTCAGGGCCAT +
Preference number: 3 (lower is better)
Translates to: QPTGALVECYEQ*CLPTVGHPQGH
Trigger: ATGGCCCTGAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR GCA 72 bp CCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTT +
Preference number: 3 (lower is better)
Translates to: PAVARMMALNSC*SSSFRSRVLRF
Trigger: AAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR CCA 72 bp CTCAGCAACAAGTTGGCCAGGCTGATGCCCAAGTTCTaGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGA +
Preference number: 3 (lower is better)
Translates to: LSNKLARLMPKF*AANWGPRGMLR
Trigger: TCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGTTGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR CAA 90 bp GAACTTTCTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTGCAAAGCCAGAAATGTaGTGTTCTCTCCTCTCGGGG +
Preference number: 3 (lower is better)
Translates to: ELSLQLGCSSQGAGSHHTAKPEM*CSLLSG
Trigger: CCCCGAGAGGAGAGAACACAACATTTCTGGCTTTGC...AGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542822.5
3UTR GCA 72 bp CCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGTAATCACTCCCCAGAT +
Preference number: 3 (lower is better)
Translates to: PKVRQIPGRLEP*SSVSRGNHSPD
Trigger: ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR GCA 72 bp CCAATGGCGCAAAGCATGGGACCACCTCTATCTACTTaGTCCCCAGCGCCTTTTGGACCGGTAGCATCCCAA +
Preference number: 3 (lower is better)
Translates to: PMAQSMGPPLST*SPAPFGPVASQ
Trigger: TTGGGATGCTACCGGTCCAAAAGGCGCTGGGGAGCAAGTAGATAGAGGTGGTCCCATGCTTTGCGCCATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR GCA 72 bp CCAGTCAGGTACAGTTGCCCATCCTTCATAGCTGTATaGACGGCTACTGGCACACTGCAGCCTCCTTCCAGG +
Preference number: 3 (lower is better)
Translates to: PVRYSCPSFIAV*TATGTLQPPSR
Trigger: CCTGGAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTACCTGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR TCA 72 bp CCAGGAGGAAGCACAGTGGGCAGGTCCTTCAAGGAGTaGACAACCAGGTCCACTTCATTCTTCTCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: PGGSTVGRSFKE*TTRSTSFFSRA
Trigger: TGCCCTGGAGAAGAATGAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR CCA 72 bp TCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTaGGTCATCCTCAGGGCCATCTTCATGCTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: SWNVTSSDAYQL*VILRAIFMLGR
Trigger: CCTGCCCAGCATGAAGATGGCCCTGAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR CAA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCAAATCCCTGGAAGGCTaGAACCCTGCAGTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVKSLEG*NPAVQS
Trigger: AGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR CCA 72 bp ATATGTCACCATGTGGCTTCCCTGGTCAAGTGTACCTaGCCCACAGCATACATGCATTCCTCAGGGTGCAGG +
Preference number: 3 (lower is better)
Translates to: ICHHVASLVKCT*PTAYMHSSGCR
Trigger: CCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAGGTACACTTGACCAGGGAAGCCACATGGTGACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR CAA 90 bp CGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGCTGCTCGTCCTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 3 (lower is better)
Translates to: RCRPAVARMMALNSCCSSSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...GGACGAGCAGCAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR-3UTR CAA 90 bp CCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 3 (lower is better)
Translates to: PAHALQASCCQDDGTELLSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...CAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR-3UTR CAA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTTCCAGTCAGGTACAGTaGCCCATCCTTCATAGCTGT +
Preference number: 3 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITSSQVQ*PILHSC
Trigger: ACAGCTATGAAGGATGGGCAACTGTACCTGACTGGA...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR GCA 72 bp CCATCTTCATGCTGGGCAGGGACATGGATGGTAGCCTaGATGGTCTCTTGTATGCTATCTGAGCCGTCTAGA +
Preference number: 3 (lower is better)
Translates to: PSSCWAGTWMVA*MVSCMLSEPSR
Trigger: TCTAGACGGCTCAGATAGCATACAAGAGACCATGCAGGCTACCATCCATGTCCCTGCCCAGCATGAAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR CAA 90 bp AACTCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATAGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 3 (lower is better)
Translates to: NSCCSSSFRSRVLRFPRIACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...TATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
3UTR-3UTR CAA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATTCCAGTCAGGTACAGTaGCCCATCCTTCATAGCTGT +
Preference number: 3 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENSSQVQ*PILHSC
Trigger: ACAGCTATGAAGGATGGGCAACTGTACCTGACTGGA...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR-3UTR CAA 90 bp GAACTTTCTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTGAAGACAGATGGTCCTaGACTTACAATAGGGTTACA +
Preference number: 3 (lower is better)
Translates to: ELSLQLGCSSQGAGSHHTEDRWS*TYNRVT
Trigger: TGTAACCCTATTGTAAGTCAAGGACCATCTGTCTTC...AGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649868.1
3UTR-3UTR CAA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGAAATCCCTGGAAGGCTaGAACCCTGCAGTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQKSLEG*NPAVQS
Trigger: AGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR CCA 72 bp TTGGTTGAGAACAAAGGGAAGGCATATGTCACCATGTaGCTTCCCTGGTCAAGTGTACCTGGCCCACAGCAT +
Preference number: 3 (lower is better)
Translates to: LVENKGKAYVTM*LPWSSVPGPQH
Trigger: ATGCTGTGGGCCAGGTACACTTGACCAGGGAAGCCACATGGTGACATATGCCTTCCCTTTGTTCTCAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR CAA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAAAATCCCTGGAAGGCTaGAACCCTGCAGTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSKSLEG*NPAVQS
Trigger: AGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTT...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR CAA 90 bp CACGCCCAAGGCCCCCTGATGGAAAAACATCCTAGGACATCAGGCCTGATCTTTGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 3 (lower is better)
Translates to: HAQGPLMEKHPRTSGLIFACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...AAAGATCAGGCCTGATGTCCTAGGATGTTTTTCCATCAGGGGGCCTTGGGCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR GCA 72 bp CCCACAAACCAGTTAATGGGCATCGTTAAGCTGCCGTaGAACATCCAGGATGTTTTTGGCTCCTTTGCTCAG +
Preference number: 3 (lower is better)
Translates to: PTNQLMGIVKLP*NIQDVFGSFAQ
Trigger: CTGAGCAAAGGAGCCAAAAACATCCTGGATGTTGCACGGCAGCTTAACGATGCCCATTAACTGGTTTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR CCA 72 bp AACAAAGGGAAGGCATATGTCACCATGTGGCTTCCCTaGTCAAGTGTACCTGGCCCACAGCATACATGCATT +
Preference number: 3 (lower is better)
Translates to: NKGKAYVTMWLP*SSVPGPQHTCI
Trigger: AATGCATGTATGCTGTGGGCCAGGTACACTTGACCAGGGAAGCCACATGGTGACATATGCCTTCCCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR-3UTR CAA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGAAATCCCTGGAAGGCTaGAACCCTGCAGTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEKSLEG*NPAVQS
Trigger: AGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTT...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
3UTR-3UTR CAA 90 bp AGGAGTGAACAACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTGCAGTATCAAGAATCTaGTCCCCTGTGGTGGACATA +
Preference number: 3 (lower is better)
Translates to: RSEQPGPLHSSPGHVQAPAVSRI*SPVVDI
Trigger: TATGTCCACCACAGGGGACAAGATTCTTGATACTGC...AGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGTTGTTCACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
3UTR TCA 72 bp CATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATaGAGCCCCCACATACTGAGGAGGCAAGGCAGTCAT +
Preference number: 3 (lower is better)
Translates to: HSKAVAWTSLKR*SPHILRRQGSH
Trigger: ATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
3UTR TCA 72 bp GTAAATTTTCTCCATGAAAGCCTAGAGTCTGGCCTCTaGTTCACAATCTTCCCAGCCTACGGTGTTAGAGGT +
Preference number: 3 (lower is better)
Translates to: VNFLHESLESGL*FTIFPAYGVRG
Trigger: ACCTCTAACACCGTAGGCTGGGAAGATTGTGAATCAGAGGCCAGACTCTAGGCTTTCATGGAGAAAATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649868.1
3UTR-3UTR CAA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGAAATCCCTGGAAGGCTaGAACCCTGCAGTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKKSLEG*NPAVQS
Trigger: AGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTT...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
3UTR GCA 72 bp TGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTaGTCTAAAAGTACTTTCCATATGTCAGCTCATTTC +
Preference number: 3 (lower is better)
Translates to: CIPQGAGLHARH*SKSTFHMSAHF
Trigger: GAAATGAGCTGACATATGGAAAGTACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
3UTR GCA 72 bp GGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTaGTTGGACTTCTCTAAAGAGATGAAGCCCCCACAT +
Preference number: 3 (lower is better)
Translates to: GLLVGLVTFKGC*LDFSKEMKPPH
Trigger: ATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCCTACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCGGGGCAGGCCCTACCTaGCCCACCCGGTTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PYLPHPVVPAHALQASCCGAGPT*PTRLCQ
Trigger: CTGGCACAACCGGGTGGGGCAGGTAGGGCCTGCCCC...GCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
CDS-3UTR GCA 90 bp CAGGGTGCAGGATCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGGGTTGTGCCAGCCCATaGGCTGCAGGCCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QGAGSAPPGCASPCAAGQGCASP*AAGQLL
Trigger: CAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACC...CTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGATCCTGCACCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR GCA 90 bp CCTACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCCTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTCPTRLCQPMRCRPAVASLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...GGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
CDS-3UTR GCA 90 bp CCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PHPVVPAHALQASCCQDDCQPMR*RPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCA...ATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp GGCCCTACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: GPTCPTRLCQPMRCRPAVRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...AACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
CDS-3UTR GCA 90 bp AGGATCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCCATGCATTCCTCAGGGTaGAGGATCTGCCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: RICPTRLCQPMRCRPAVAMHSSG*RICPTR
Trigger: CCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCAT...GGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CCA 90 bp GGCCCTACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTAAAGTAGGCTGTGTGTaGGTGCCGCTAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GPTCPTRLCQPMRCRPAVKVGCV*VPLRSP
Trigger: GGGGGACCTTAGCGGCACCCACACACAGCCTACTTT...AACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
CDS-3UTR GCA 90 bp CCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PAHALQASCCQDDGTELLCQPMR*RPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCA...CAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp CCCTACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCTTCCCCGAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: PYLPHPVVPAHALQASCCFPEYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAA...GCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
CDS-3UTR GCA 90 bp CCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: PHPVVPAHALQASCCQDDALNSC*SSSFRS
Trigger: GCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGC...ATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp ATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGAAGCACGGGGCAGGCCCTACCTaGCCCACCCGGTTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: MRVFPLADGSDGEARRKHGAGPT*PTRLCQ
Trigger: CTGGCACAACCGGGTGGGGCAGGTAGGGCCTGCCCC...GTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
CDS-3UTR CCA 90 bp CAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGCAGTACCGGGGACACGTaGGACCCGAGGTCGTCCTAC +
Preference number: 4 (lower is better)
Translates to: QPMRCRPAVARMMALNSCSTGDT*DPRSSY
Trigger: GTAGGACGACCTCGGGTCCCACGTGTCCCCGGTACT...GCAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp ACTTTCTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTCTTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TFSAAGLLFAGSWFPPHSCQPMR*RPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCA...AGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CCA 90 bp GGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTCCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GQADAQVLGSQLGPSWNVPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...AACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp CCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: PAHALQASCCQDDGTELLRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...CAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp CCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGTCCGAAGCCGGGTGTTaGGGTTTCCCCGAATACTCC +
Preference number: 4 (lower is better)
Translates to: PAHALQASCCQDDGTELLSEAGC*GFPEYS
Trigger: GGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGA...CAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp GATGCCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: DAQVLGSQLGPSWNVTSSVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...ACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGCGAGCAAGCTGGCTCTTaGGGGTACCCACGCGAATCA +
Preference number: 4 (lower is better)
Translates to: QPMRCRPAVARMMALNSCEQAGS*GYPRES
Trigger: TGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC...GCAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp CTCCAATCTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGCGGGACGTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LQSSELGAAQKESRGSGTSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...CGTCCCGCTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAGATTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVCQPMR*RPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPCQPMR*RPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCA...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCGCGAGCAAGCGCCGTTaGAGCCGCATTGCCGTTACC +
Preference number: 4 (lower is better)
Translates to: SCCSSSFRSRVLRFPRILASKRR*SRIAVT
Trigger: GGTAACGGCAATGCGGCTGCAACGGCGCTTGCTCGC...GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535793.5
CDS-3UTR GCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCCCTGGGGCCAATCGCTaGACGGCTCGTCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPPGANR*TARPEA
Trigger: GGCTTCTGGACGAGCCGTGCAGCGATTGGCCCCAGG...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR CCA 90 bp CTCAGCAACAAGTTGGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAACTGGGGCCTGATGCCCAAGTTCTaGGCAGCCAACTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LSNKLARLMPKFWAANWGLMPKF*AANWGP
Trigger: AGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAG...GCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGTTGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAGCATACATGCATTCCTCAGGGTGCAGGATCTGCCCCACCCGGTTGTGCCAGCGAGCAAGCTGGCTCTTaGGGGTACCCACGCGAATCA +
Preference number: 4 (lower is better)
Translates to: QHTCIPQGAGSAPPGCASEQAGS*GYPRES
Trigger: TGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC...GCTGGCACAACCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCATGTATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR GCA 90 bp AGATGTCCTGGTCCTTGGCTCGCACTTCCACGCCCAAGGCCCCCTGATGGAAAATCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RCPGPWLALPRPRPPDGKSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...TTTTCCATCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSCQPMR*RPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCA...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITCQPMR*RPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCA...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHCQPMR*RPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCA...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSCQPMR*RPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCA...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCGGTTGTGCCAGCCCATaGGCTGCAGGCCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVGCASP*AAGQLL
Trigger: CAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACC...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AACTCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATAGGTTGTGCCAGCCCATaGGCTGCAGGCCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: NSCCSSSFRSRVLRFPRIGCASP*AAGQLL
Trigger: CAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACC...TATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCGGTTGTGCCAGCCCATaGGCTGCAGGCCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPGCASP*AAGQLL
Trigger: CAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACC...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATGGTTGTGCCAGCCCATaGGCTGCAGGCCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDGCASP*AAGQLL
Trigger: CAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACC...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCCGGCTACTGGCACACTaGAGCCTCCTTCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVRLLAH*SLLPGA
Trigger: GGCACCTGGAAGGAGGCTGCAGTGTGCCAGTAGCCG...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ACCAACTGTGGGTCATCCTCAGGGCCATCTTCATGCTGGGCAGGGACATGGATGCGGCTACTGGCACACTaGAGCCTCCTTCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: TNCGSSSGPSSCWAGTWMRLLAH*SLLPGA
Trigger: GGCACCTGGAAGGAGGCTGCAGTGTGCCAGTAGCCG...CATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGAGGATGACCCACAGTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp GGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTTCAGGGCCATCTTCATaGTGGGCAGGGACATGGATG +
Preference number: 4 (lower is better)
Translates to: GQADAQVLGSQLGPSWNVSGPSS*WAGTWM
Trigger: CATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGA...AACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CTCGGGGCAGCGGGACGGGCTTTAGCTATAGGCAAAGCCAGAAATGTTGTGTTCCCTGGGGCCAATCGCTaGACGGCTCGTCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LGAAGRALAIGKARNVVFPGANR*TARPEA
Trigger: GGCTTCTGGACGAGCCGTGCAGCGATTGGCCCCAGG...GAACACAACATTTCTGGCTTTGCCTATAGCTAAAGCCCGTCCCGCTGCCCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGACGCCCAAGGCCCCCTaGCCCACCCGGTTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQTPKAP*PTRLCQ
Trigger: CTGGCACAACCGGGTGGGGCAGGGGGCCTTGGGCGT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGGAATCCCACCCAGATaGCCGCAGGGACCGGAGTTC +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPGIPPR*PQGPEF
Trigger: GAACTCCGGTCCCTGCGGGCATCTGGGTGGGATTCC...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR CCA 90 bp CGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTTGGCTCGCAAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: RDRAAHPPDPRCPGPWLARCPGP*LALPRP
Trigger: TGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCT...TGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CCA 90 bp CTCAGCAACAAGTTGGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAACTGGGGCAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: LSNKLARLMPKFWAANWGRCPGP*LALPRP
Trigger: TGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCT...GCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGTTGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGAGTACCGGGGACACGTaGGACCCGAGGTCGTCCTAC +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGSTGDT*DPRSSY
Trigger: GTAGGACGACCTCGGGTCCCACGTGTCCCCGGTACT...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGTACCGGGGACACGTaGGACCCGAGGTCGTCCTAC +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDSTGDT*DPRSSY
Trigger: GTAGGACGACCTCGGGTCCCACGTGTCCCCGGTACT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CTCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTTCCGAAGCCGGGTGTTaGGGTTTCCCCGAATACTCC +
Preference number: 4 (lower is better)
Translates to: LLLLVQLPKPGVEVSPNTSEAGC*GFPEYS
Trigger: GGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGA...AGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCGGTCGTCCTACAGTCTaGCTCCTGGTCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVGRPTV*LLVSAE
Trigger: CTCTGCGGAGACCAGGAGTCAGACTGTAGGACGACC...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000652429.1
CDS-3UTR GCA 90 bp GATGCCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGAGCAAGCTGGCTCTTaGGGGTACCCACGCGAATCA +
Preference number: 4 (lower is better)
Translates to: DAQVLGSQLGPSWNVTSSEQAGS*GYPRES
Trigger: TGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC...ACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAACTGTGGGTCATCCTCAGGGCCATCTTCATGCTGGGCAGGGACATGGATGGTTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QLWVILRAIFMLGRDMDGSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...ACCATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGAGGATGACCCACAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGCATCATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SIMRVFPLADGSDGEARRSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...CCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCATGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR GCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGCGGGACGGGCTTTACTGCAGGCCAGCTGTTaGCAGGATGATGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: LQNWEQPRRNLGAAGRALLQASC*QDDGTE
Trigger: TTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAG...TAAAGCCCGTCCCGCTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGGTTGTGCCAGCCCATaGGCTGCAGGCCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITGCASP*AAGQLL
Trigger: CAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACC...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGGTTGTGCCAGCCCATaGGCTGCAGGCCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSGCASP*AAGQLL
Trigger: CAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACC...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCATGCATTCCTCAGGGTaGAGGATCTGCCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPMHSSG*RICPTR
Trigger: CCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCAT...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCATGCATTCCTCAGGGTaGAGGATCTGCCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVMHSSG*RICPTR
Trigger: CCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCAT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAATGCATTCCTCAGGGTaGAGGATCTGCCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPMHSSG*RICPTR
Trigger: CCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCAT...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGCAGAGTCTCGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCAGAGTCTCGGGATCGTaGAGCACACCCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: SRVSGSCSTPTRSKMSWSRVSGS*STPTRS
Trigger: GGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCT...GGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGCGGCTACTGGCACACTaGAGCCTCCTTCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSERLLAH*SLLPGA
Trigger: GGCACCTGGAAGGAGGCTGCAGTGTGCCAGTAGCCG...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCACGGCTACTGGCACACTaGAGCCTCCTTCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSRLLAH*SLLPGA
Trigger: GGCACCTGGAAGGAGGCTGCAGTGTGCCAGTAGCCG...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACCGGCTACTGGCACACTaGAGCCTCCTTCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHRLLAH*SLLPGA
Trigger: GGCACCTGGAAGGAGGCTGCAGTGTGCCAGTAGCCG...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGATGTCCTGGTCCTTGGCTCGCACTTCCACGCCCAAGGCCCCCTGATGGAAAACCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTC +
Preference number: 4 (lower is better)
Translates to: RCPGPWLALPRPRPPDGKPLQPH*RYQTWL
Trigger: GAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGG...TTTTCCATCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAAGCACTCACCGCCGTTaGAGCCGCATTGCCGTTACC +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPSTHRR*SRIAVT
Trigger: GGTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCT...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTCGGCTACTGGCACACTaGAGCCTCCTTCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSRLLAH*SLLPGP
Trigger: TGGGCCAGGAAGGAGGCTGCAGTGTGCCAGTAGCCG...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542729.5
ENST00000544387.5
CDS-3UTR GCA 90 bp AGCATCATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGTCTTGTCCCCGCCGTTaGAGCCGCATTGCCGTTACC +
Preference number: 4 (lower is better)
Translates to: SIMRVFPLADGSDGEARRSCPRR*SRIAVT
Trigger: GGTAACGGCAATGCGGCTGCAACGGCGGGGACAAGA...CCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCATGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR CCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAACGCCCAAGGCCCCCTaGCCCACAGCATACATGCAT +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPTPKAP*PTAYMH
Trigger: ATGCATGTATGCTGTGGGCCAGGGGGCCTTGGGCGT...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGATGTGCTGGGCAGGGACATaGATGGTAGCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: PKFWAANWGPRGMLRAVMCWAGT*MVACMV
Trigger: GACCATGCAGGCTACCATCCATGTCCCTGCCCAGCA...CATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp GCCTACCAACTGTGGGTCATCCTCAGGGCCATCTTCATGCTGGGCAGGGACATGTGCTGGGCAGGGACATaGATGGTAGCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: AYQLWVILRAIFMLGRDMCWAGT*MVACMV
Trigger: GACCATGCAGGCTACCATCCATGTCCCTGCCCAGCA...CATGTCCCTGCCCAGCATGAAGATGGCCCTGAGGATGACCCACAGTTGGTAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp CTCAGCAACAAGTTGGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAACTGGGGCGGGCCATCTTCATGCTaGGCAGGGACATGGATGGTA +
Preference number: 4 (lower is better)
Translates to: LSNKLARLMPKFWAANWGGPSSC*AGTWMV
Trigger: TACCATCCATGTCCCTGCCCAGCATGAAGATGGCCC...GCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGTTGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATCTGATGCCCAAGTTCTaGGCAGCCAACTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDLMPKF*AANWGP
Trigger: AGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAG...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGCTGATGCCCAAGTTCTaGGCAGCCAACTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGLMPKF*AANWGP
Trigger: AGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAG...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCCTGATGCCCAAGTTCTaGGCAGCCAACTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVLMPKF*AANWGP
Trigger: AGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAG...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATCCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGCCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCACTACAGTCTGACTCCTaGTCTCCGCAGAGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPLQSDS*SPQSLA
Trigger: CGCGAGGCTCTGCGGAGACCAGGAGTCAGACTGTAG...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000652429.1
CDS-3UTR CCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAGTACCGGGGACACGTaGGACCCGAGGTCGTCCTAC +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSESTGDT*DPRSSY
Trigger: GTAGGACGACCTCGGGTCCCACGTGTCCCCGGTACT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTCTTCTCTAAGCCCAAAGTGTGCTaGTCACCGGCTCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: LCSWAALRRELVPTTLFSKPKVC*SPAQHS
Trigger: TGAGTGCTGAGCCGGTGACCAGCACACTTTGGGCTT...AGAGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR CCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCACTGAGGATGGCAACCTaGGGCCAATCGCTGCACGGC +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSLRMAT*GQSLHG
Trigger: GCCGTGCAGCGATTGGCCCCAGGTTGCCATCCTCAG...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR CCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCATCACAGCTGGGGACTTaGAGCGTTGGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPSQLGT*SVGCGW
Trigger: CCAGCCACAGCCAACGCTCCAAGTCCCCAGCTGTGA...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR CCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTATCTCGGCCTGGCAGTaGCCTCCACCAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSISAWQ*PPPALQ
Trigger: CTGCAGAGCTGGTGGAGGCCACTGCCAGGCCGAGAT...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR TCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCACAAGTTGGCCAGGCTaGTGCCCAAGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPTSWPG*CPSSGQ
Trigger: CTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGT...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGACAAGTTGGCCAGGCTaGTGCCCAAGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGTSWPG*CPSSGQ
Trigger: CTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGT...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp TGGGGCCCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCACAAGTTGGCCAGGCTaGTGCCCAAGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: WGPRGMLRAVMPTNCGSSTSWPG*CPSSGQ
Trigger: CTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGT...GGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCACAAGTTGGCCAGGCTaGTGCCCAAGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVTSWPG*CPSSGQ
Trigger: CTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGATCAAGGCCCCAAGGTaGGGCAAATCCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGIKAPR*GKSLEG
Trigger: GCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGAT...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATGAAGCCCCCACATACTaGGGAGGCAAGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDEAPTY*GGKAVI
Trigger: GATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTC...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACGGTCGTCCTACAGTCTaGCTCCTGGTCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHGRPTV*LLVSAE
Trigger: CTCTGCGGAGACCAGGAGTCAGACTGTAGGACGACC...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000652429.1
CDS-3UTR TCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGGTCGTCCTACAGTCTaGCTCCTGGTCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSGRPTV*LLVSAE
Trigger: CTCTGCGGAGACCAGGAGTCAGACTGTAGGACGACC...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000652429.1
CDS-3UTR TCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATCTTCCAATAGACGACTaGGGATGGCAACCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDLPIDD*GWQPGA
Trigger: GGCCCCAGGTTGCCATCCTCAGTCGTCTATTGGAAG...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR TCA 90 bp AACTCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTTCCAATAGACGACTaGGGATGGCAACCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: NSCCSSSFRSRVLRFPRILPIDD*GWQPGA
Trigger: GGCCCCAGGTTGCCATCCTCAGTCGTCTATTGGAAG...TATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR TCA 90 bp CCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATGACAAGCTTCTTGGTTaGGAACAAAGGGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: PHPVVPAHALQASCCQDDDKLLG*EQREGI
Trigger: TATGCCTTCCCTTTGTTCTCAACCAAGAAGCTTGTC...ATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR TCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGCGTGCATCCCAGGCCTaGTGGGAATCCCACCCAGAT +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSERASQA*WESHPD
Trigger: ATCTGGGTGGGATTCCCATCAGGCCTGGGATGCACG...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR TCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCACAGCCCAGCCTCGAATaGAAGGACCCCGTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPQPSLE*KDPVCV
Trigger: TACACAGACGGGGTCCTTTCATTCGAGGCTGGGCTG...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR GCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGGAGCAAGCTGGCTCTTaGGGGTACCCACGCGAATCA +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGEQAGS*GYPRES
Trigger: TGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGAGCAAGCTGGCTCTTaGGGGTACCCACGCGAATCA +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPEQAGS*GYPRES
Trigger: TGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCATCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCTCAGGGTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PRGMLRAVMPTNCGSSSGSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...CCCTGAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVALNSC*SSSFRS
Trigger: GCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGC...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPALNSC*SSSFRS
Trigger: GCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGC...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDALNSC*SSSFRS
Trigger: GCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGC...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTTTCTCTCCAATCTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGGGTTGTGCCAGCCCATaGGCTGCAGGCCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LFSPIFRTGSSPEGISGQGCASP*AAGQLL
Trigger: CAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACC...CTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAGATTGGAGAGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR GCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGTTGTGCCAGCCCATaGGCTGCAGGCCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENGCASP*AAGQLL
Trigger: CAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACC...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGATGCATTCCTCAGGGTaGAGGATCTGCCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEMHSSG*RICPTR
Trigger: CCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCAT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCAGAGTCTCGGGATCGTaGAGCACACCCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVRVSGS*STPTRS
Trigger: GGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAACTGTGGGTCATCCTCAGGGCCATCTTCATGCTGGGCAGGGACATGGATGGTAGAGTCTCGGGATCGTaGAGCACACCCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: QLWVILRAIFMLGRDMDGRVSGS*STPTRS
Trigger: GGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCT...ACCATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGAGGATGACCCACAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAAGGCCCTTTCAGCGATaGAGCGAAGCAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPRPFQR*SEAESR
Trigger: CCGAGACTCTGCTTCGCTGCATCGCTGAAAGGGCCT...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGGCCCTTTCAGCGATaGAGCGAAGCAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDRPFQR*SEAESR
Trigger: CCGAGACTCTGCTTCGCTGCATCGCTGAAAGGGCCT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCAGGCCCTTTCAGCGATaGAGCGAAGCAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVRPFQR*SEAESR
Trigger: CCGAGACTCTGCTTCGCTGCATCGCTGAAAGGGCCT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCACAGCCTCCTTCCAGGTaGCTCAGGAAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPQPPSR*LRKALS
Trigger: TGAAAGGGCCTTCCTGAGGCACCTGGAAGGAGGCTG...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCCAGCCTCCTTCCAGGTaGCTCAGGAAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVQPPSR*LRKALS
Trigger: TGAAAGGGCCTTCCTGAGGCACCTGGAAGGAGGCTG...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGCAGCCTCCTTCCAGGTaGCTCAGGAAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGQPPSR*LRKALS
Trigger: TGAAAGGGCCTTCCTGAGGCACCTGGAAGGAGGCTG...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GCAGGGACATGGATGGTAGCCTGCATGGTCTCTTGTATGCTATCTGAGCCGTCTCGGCTACTGGCACACTaGAGCCTCCTTCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: AGTWMVACMVSCMLSEPSRLLAH*SLLPGA
Trigger: GGCACCTGGAAGGAGGCTGCAGTGTGCCAGTAGCCG...AGACGGCTCAGATAGCATACAAGAGACCATGCAGGCTACCATCCATGTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp GGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTTCCTTCATAGCTGTATaGACGGCTACTGGCACACTG +
Preference number: 4 (lower is better)
Translates to: GQADAQVLGSQLGPSWNVSFIAV*TATGTL
Trigger: CAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGA...AACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGGRLEP*SSVSRG
Trigger: ACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCC...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAACTGTGGGTCATCCTCAGGGCCATCTTCATGCTGGGCAGGGACATGGATGGTGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: QLWVILRAIFMLGRDMDGGRLEP*SSVSRG
Trigger: ACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCC...ACCATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGAGGATGACCCACAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTC +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPPLQPH*RYQTWL
Trigger: GAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGG...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TCCTTCATAGCTGTATGCACGGCTACTGGCACACTGCAGCCTCCTTCCAGGTGCCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTC +
Preference number: 4 (lower is better)
Translates to: SFIAVCTATGTLQPPSRCPLQPH*RYQTWL
Trigger: GAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGG...GCACCTGGAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640813.1
CDS-3UTR GCA 90 bp AGCATCATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTC +
Preference number: 4 (lower is better)
Translates to: SIMRVFPLADGSDGEARRPLQPH*RYQTWL
Trigger: GAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGG...CCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCATGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR GCA 90 bp CCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGATGGTTTTCTTCCGCCGTTaGAGCCGCATTGCCGTTACC +
Preference number: 4 (lower is better)
Translates to: PKFWAANWGPRGMLRAVMVFFRR*SRIAVT
Trigger: GGTAACGGCAATGCGGCTGCAACGGCGGAAGAAAAC...CATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTGTATGCGAGCAAGCTaGCTCTTGCGGGTACCCACG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVCMRAS*LLRVPT
Trigger: CGTGGGTACCCGCAAGAGCCAGCTTGCTCGCATACA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CTCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLLVQLPKPGVEVSPNTLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...AGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGACGCCCAAGGCCCCCTaGCCCACAGCATACATGCAT +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSETPKAP*PTAYMH
Trigger: ATGCATGTATGCTGTGGGCCAGGGGGCCTTGGGCGT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTACGCCCAAGGCCCCCTaGCCCACAGCATACATGCAT +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITTPKAP*PTAYMH
Trigger: ATGCATGTATGCTGTGGGCCAGGGGGCCTTGGGCGT...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGRCPGP*LALPRP
Trigger: TGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCT...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTCTTCTCTAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCC +
Preference number: 4 (lower is better)
Translates to: LCSWAALRRELVPTTLFSRSKMS*SLARTS
Trigger: GGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCT...AGAGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCTGGGCAGGGACATaGATGGTAGCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPCWAGT*MVACMV
Trigger: GACCATGCAGGCTACCATCCATGTCCCTGCCCAGCA...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTGCTGGGCAGGGACATaGATGGTAGCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVCWAGT*MVACMV
Trigger: GACCATGCAGGCTACCATCCATGTCCCTGCCCAGCA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTCTGATGCCCAAGTTCTaGGCAGCCAACTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSLMPKF*AANWGP
Trigger: AGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAG...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTCCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GTACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTGCAGCCCCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VQLPILHSCMHGYWHTAAPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...GGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCACCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTCTACAGTCTGACTCCTaGTCTCCGCAGAGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSLQSDS*SPQSLA
Trigger: CGCGAGGCTCTGCGGAGACCAGGAGTCAGACTGTAG...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000652429.1
CDS-3UTR CCA 90 bp TACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTGCAGCCTAGTACCGGGGACACGTaGGACCCGAGGTCGTCCTAC +
Preference number: 4 (lower is better)
Translates to: YSCPSFIAVCTATGTLQPSTGDT*DPRSSY
Trigger: GTAGGACGACCTCGGGTCCCACGTGTCCCCGGTACT...AGGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640813.1
CDS-3UTR CCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAAAAGTAGGCTGTGTGTaGGTGCCGCTAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPKVGCV*VPLRSP
Trigger: GGGGGACCTTAGCGGCACCCACACACAGCCTACTTT...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCAAAGTAGGCTGTGTGTaGGTGCCGCTAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPKVGCV*VPLRSP
Trigger: GGGGGACCTTAGCGGCACCCACACACAGCCTACTTT...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAAAGTAGGCTGTGTGTaGGTGCCGCTAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDKVGCV*VPLRSP
Trigger: GGGGGACCTTAGCGGCACCCACACACAGCCTACTTT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TGGGGCCCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCAAAGTAGGCTGTGTGTaGGTGCCGCTAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: WGPRGMLRAVMPTNCGSSKVGCV*VPLRSP
Trigger: GGGGGACCTTAGCGGCACCCACACACAGCCTACTTT...GGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGGGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640813.1
CDS-3UTR CCA 90 bp CAGCATACATGCATTCCTCAGGGTGCAGGATCTGCCCCACCCGGTTGTGCCAGCAGACATGGCTCCGCTTaGAAAGTAGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: QHTCIPQGAGSAPPGCASRHGSA*KVGCVW
Trigger: CCACACACAGCCTACTTTCCAAGCGGAGCCATGTCT...GCTGGCACAACCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCATGTATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR TCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSERWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGCGGGACGGGCTTTAAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LQNWEQPRRNLGAAGRALKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...TAAAGCCCGTCCCGCTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp TGGCCCACAGCATACATGCATTCCTCAGGGTGCAGGATCTGCCCCACCCGGTTGAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: WPTAYMHSSGCRICPTRLKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...CAACCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR TCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTTCCGAAGCCGGGTGTTaGGGTTTCCCCGAATACTCC +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSSEAGC*GFPEYS
Trigger: GGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGA...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGTCCGAAGCCGGGTGTTaGGGTTTCCCCGAATACTCC +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSESEAGC*GFPEYS
Trigger: GGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGA...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCCAGATGTCCGAAGCCGGGTGTTaGGGTTTCCCCGAATACTCC +
Preference number: 4 (lower is better)
Translates to: QLPKPGVEVSPNTPELQMSEAGC*GFPEYS
Trigger: GGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGA...CATCTGGAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAACAAGTTGGCCAGGCTaGTGCCCAAGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSTSWPG*CPSSGQ
Trigger: CTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGT...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GTACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTGCAGCCACAAGTTGGCCAGGCTaGTGCCCAAGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VQLPILHSCMHGYWHTAATSWPG*CPSSGQ
Trigger: CTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGT...GGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp GATGCCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTAATCCCTGGAAGGCTTaGACCCTGCAGTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: DAQVLGSQLGPSWNVTSSNPWKA*TLQFSL
Trigger: GAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATT...ACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTATCAAGGCCCCAAGGTaGGGCAAATCCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSIKAPR*GKSLEG
Trigger: GCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGAT...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GTACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTGCAGCCATCAAGGCCCCAAGGTaGGGCAAATCCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VQLPILHSCMHGYWHTAAIKAPR*GKSLEG
Trigger: GCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGAT...GGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTGAAGCCCCCACATACTaGGGAGGCAAGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSEAPTY*GGKAVI
Trigger: GATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTC...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGGAAGCCCCCACATACTaGGGAGGCAAGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEEAPTY*GGKAVI
Trigger: GATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTC...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAAGCCCCCACATACTaGGGAGGCAAGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSEAPTY*GGKAVI
Trigger: GATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTC...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp TCTATCTACTTGCTCCCCAGCGCCTTTTGGACCGGTAGCATCCCAAGGTCTGCCAGGTCTGCCCCTCCCTaGGAATGCTATTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SIYLLPSAFWTGSIPRSARSAPP*ECYSGE
Trigger: TTCCCCAGAATAGCATTCTCAGGGAGGGGCAGACCT...GGCAGACCTTGGGATGCTACCGGTCCAAAAGGCGCTGGGGAGCAAGTAGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR TCA 90 bp AGATGTCCTGGTCCTTGGCTCGCACTTCCACGCCCAAGGCCCCCTGATGGAAAACTAGGACATCAGGCCTaGTCTTTCCCCAACCAATGG +
Preference number: 4 (lower is better)
Translates to: RCPGPWLALPRPRPPDGKLGHQA*SFPNQW
Trigger: CCATTGGTTGGGGAAAGATCAGGCCTGATGTCCTAG...TTTTCCATCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAGGACCTGCTGTTGCTaGCGCTGCAGTAACCAGGAC +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSERTCCC*RCSNQD
Trigger: GTCCTGGTTACTGCAGCGGCAGCAACAGCAGGTCCT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392841.1
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGAGCAAGCTGGCTCTTaGGGGTACCCACGCGAATCA +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITEQAGS*GYPRES
Trigger: TGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGCAAGCTGGCTCTTaGGGGTACCCACGCGAATCA +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSEQAGS*GYPRES
Trigger: TGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGGAGCAAGCTGGCTCTTaGGGGTACCCACGCGAATCA +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEEQAGS*GYPRES
Trigger: TGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTGAGCAAGCTGGCTCTTaGGGGTACCCACGCGAATCA +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSEQAGS*GYPRES
Trigger: TGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AACTCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACACTGTCCGTCTGTATaGGAGCAAGCTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: NSCCSSSFRSRVLRFPRIHCPSV*EQAGSC
Trigger: GCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTG...TATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp ATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGAAGCACCACTGTCCGTCTGTATaGGAGCAAGCTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: MRVFPLADGSDGEARRKHHCPSV*EQAGSC
Trigger: GCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTG...GTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp TCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SCCSSSFRSRVLRFPRILLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp GCCTACCAACTGTGGGTCATCCTCAGGGCCATCTTCATGCTGGGCAGGGACATGCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AYQLWVILRAIFMLGRDMLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...CATGTCCCTGCCCAGCATGAAGATGGCCCTGAGGATGACCCACAGTTGGTAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSALNSC*SSSFRS
Trigger: GCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGC...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGAGGAAGCACAGTGGGCAGGTCCTTCAAGGAGTGAACAACCAGGTCCACTTCGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: RRKHSGQVLQGVNNQVHFALNSC*SSSFRS
Trigger: GCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGC...GAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHALNSC*SSSFRS
Trigger: GCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGC...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCCTGCAGGCCAGCTGTTaGCAGGATGATGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVLQASC*QDDGTE
Trigger: TTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAG...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCACTGCAGGCCAGCTGTTaGCAGGATGATGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPLQASC*QDDGTE
Trigger: TTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAG...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGGPQHT*IPQGAG
Trigger: TCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCC...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTAGAGTCTCGGGATCGTaGAGCACACCCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSRVSGS*STPTRS
Trigger: GGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCT...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTAGAGTCTCGGGATCGTaGAGCACACCCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSRVSGS*STPTRS
Trigger: GGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCT...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAAGGCCCTTTCAGCGATaGAGCGAAGCAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSRPFQR*SEAESR
Trigger: CCGAGACTCTGCTTCGCTGCATCGCTGAAAGGGCCT...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTAGGCCCTTTCAGCGATaGAGCGAAGCAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITRPFQR*SEAESR
Trigger: CCGAGACTCTGCTTCGCTGCATCGCTGAAAGGGCCT...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GTACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTGCAGCCAGGCCCTTTCAGCGATaGAGCGAAGCAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: VQLPILHSCMHGYWHTAARPFQR*SEAESR
Trigger: CCGAGACTCTGCTTCGCTGCATCGCTGAAAGGGCCT...GGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTCAGCCTCCTTCCAGGTaGCTCAGGAAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSQPPSR*LRKALS
Trigger: TGAAAGGGCCTTCCTGAGGCACCTGGAAGGAGGCTG...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCAGCCTCCTTCCAGGTaGCTCAGGAAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITQPPSR*LRKALS
Trigger: TGAAAGGGCCTTCCTGAGGCACCTGGAAGGAGGCTG...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGCGGCTACTGGCACACTaGAGCCTCCTTCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQRLLAH*SLLPGA
Trigger: GGCACCTGGAAGGAGGCTGCAGTGTGCCAGTAGCCG...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATTCAGGGCCATCTTCATaGTGGGCAGGGACATGGATG +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDSGPSS*WAGTWM
Trigger: CATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGA...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCAGGGCCATCTTCATaGTGGGCAGGGACATGGATG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVSGPSS*WAGTWM
Trigger: CATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHGRLEP*SSVSRG
Trigger: ACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCC...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITGRLEP*SSVSRG
Trigger: ACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCC...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEGRLEP*SSVSRG
Trigger: ACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCC...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTC +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEPLQPH*RYQTWL
Trigger: GAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGG...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTC +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITPLQPH*RYQTWL
Trigger: GAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGG...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGTTTTCTTCCGCCGTTaGAGCCGCATTGCCGTTACC +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPVFFRR*SRIAVT
Trigger: GGTAACGGCAATGCGGCTGCAACGGCGGAAGAAAAC...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000442944.7
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCGTTTTCTTCCGCCGTTaGAGCCGCATTGCCGTTACC +
Preference number: 4 (lower is better)
Translates to: LVQLPKPGVEVSPNTPELVFFRR*SRIAVT
Trigger: GGTAACGGCAATGCGGCTGCAACGGCGGAAGAAAAC...GAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGGCGAGCAAGCGCCGTTaGAGCCGCATTGCCGTTACC +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQASKRR*SRIAVT
Trigger: GGTAACGGCAATGCGGCTGCAACGGCGCTTGCTCGC...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTCACTGTCCGTCTGTATaGGAGCAAGCGCCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSHCPSV*EQAPLQ
Trigger: CTGCAACGGCGCTTGCTCGCATACAGACGGACAGTG...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS-3UTR GCA 90 bp CTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGCGGGACGGGCTTTATCACTGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: LQNWEQPRRNLGAAGRALSLISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGTGA...TAAAGCCCGTCCCGCTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTCAGAAGCCCAAAGTGTaGTGGTCACCGGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSQKPKV*WSPAQH
Trigger: GTGCTGAGCCGGTGACCAGCACACTTTGGGCTTCTG...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR GCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACCAGAAGCCCAAAGTGTaGTGGTCACCGGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHQKPKV*WSPAQH
Trigger: GTGCTGAGCCGGTGACCAGCACACTTTGGGCTTCTG...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGCGGCTACTGGCACACTaGAGCCTCCTTCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQRLLAH*SLLPGP
Trigger: TGGGCCAGGAAGGAGGCTGCAGTGTGCCAGTAGCCG...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542729.5
ENST00000544387.5
CDS-3UTR CCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCATGTATGCGAGCAAGCTaGCTCTTGCGGGTACCCACG +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSCMRAS*LLRVPT
Trigger: CGTGGGTACCCGCAAGAGCCAGCTTGCTCGCATACA...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp ATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGAAGCACCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: MRVFPLADGSDGEARRKHQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...GTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR CCA 90 bp AACTCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: NSCCSSSFRSRVLRFPRIQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...TATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CCA 90 bp GTGGACATAGCAACTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGCCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: VDIATSELGAAQKESRGSQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...GCTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAGTTGCTATGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR CCA 90 bp CTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: LVQLPKPGVEVSPNTPELLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...GAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATACGCCCAAGGCCCCCTaGCCCACAGCATACATGCAT +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENTPKAP*PTAYMH
Trigger: ATGCATGTATGCTGTGGGCCAGGGGGCCTTGGGCGT...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHRCPGP*LALPRP
Trigger: TGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCT...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSRCPGP*LALPRP
Trigger: TGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCT...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITRCPGP*LALPRP
Trigger: TGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCT...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGTATGCACGGCTACTaGCACACTGCAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPCMHGY*HTAASF
Trigger: GAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACA...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTGTATGCACGGCTACTaGCACACTGCAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVCMHGY*HTAASF
Trigger: GAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGTGTATGCACGGCTACTaGCACACTGCAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGCMHGY*HTAASF
Trigger: GAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACA...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGCTGGGCAGGGACATaGATGGTAGCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHCWAGT*MVACMV
Trigger: GACCATGCAGGCTACCATCCATGTCCCTGCCCAGCA...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGTGCTGGGCAGGGACATaGATGGTAGCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSECWAGT*MVACMV
Trigger: GACCATGCAGGCTACCATCCATGTCCCTGCCCAGCA...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGGGGCCATCTTCATGCTaGGCAGGGACATGGATGGTA +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGGPSSC*AGTWMV
Trigger: TACCATCCATGTCCCTGCCCAGCATGAAGATGGCCC...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGGGCCATCTTCATGCTaGGCAGGGACATGGATGGTA +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPGPSSC*AGTWMV
Trigger: TACCATCCATGTCCCTGCCCAGCATGAAGATGGCCC...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCGATGCCTACCAACTGTaGGTCATCCTCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPDAYQL*VILRAI
Trigger: GATGGCCCTGAGGATGACCCACAGTTGGTAGGCATC...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATGATGCCTACCAACTGTaGGTCATCCTCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDDAYQL*VILRAI
Trigger: GATGGCCCTGAGGATGACCCACAGTTGGTAGGCATC...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAACTGTGGGTCATCCTCAGGGCCATCTTCATGCTGGGCAGGGACATGGATGGTGATGCCTACCAACTGTaGGTCATCCTCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: QLWVILRAIFMLGRDMDGDAYQL*VILRAI
Trigger: GATGGCCCTGAGGATGACCCACAGTTGGTAGGCATC...ACCATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGAGGATGACCCACAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCGATGCCTACCAACTGTaGGTCATCCTCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVDAYQL*VILRAI
Trigger: GATGGCCCTGAGGATGACCCACAGTTGGTAGGCATC...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGATGCAACTGGGGCCCTCGTaGAATGTTACGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PKFWAANWGPRGMLRAVMQLGPS*NVTSSD
Trigger: ATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTG...CATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGTTCTGGGCAGCCAACTaGGGCCCTCGTGGAATGTTA +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGFWAAN*GPRGML
Trigger: TAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAA...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTTCTGGGCAGCCAACTaGGGCCCTCGTGGAATGTTA +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPFWAAN*GPRGML
Trigger: TAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAA...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTACAGTCTGACTCCTaGTCTCCGCAGAGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: PGVEVSPNTPELQMRELSLQSDS*SPQSLA
Trigger: CGCGAGGCTCTGCGGAGACCAGGAGTCAGACTGTAG...AGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CCA 90 bp CACAGTGGGCAGGTCCTTCAAGGAGTGAACAACCAGGTCCACTTCATTCTTCTCAGTACCGGGGACACGTaGGACCCGAGGTCGTCCTAC +
Preference number: 4 (lower is better)
Translates to: HSGQVLQGVNNQVHFILLSTGDT*DPRSSY
Trigger: GTAGGACGACCTCGGGTCCCACGTGTCCCCGGTACT...GAGAAGAATGAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCTGCCCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACAAAGTAGGCTGTGTGTaGGTGCCGCTAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHKVGCV*VPLRSP
Trigger: GGGGGACCTTAGCGGCACCCACACACAGCCTACTTT...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAAAGTAGGCTGTGTGTaGGTGCCGCTAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEKVGCV*VPLRSP
Trigger: GGGGGACCTTAGCGGCACCCACACACAGCCTACTTT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGATGAGACATGGCTCCGCTTaGAAAGTAGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PKFWAANWGPRGMLRAVMRHGSA*KVGCVW
Trigger: CCACACACAGCCTACTTTCCAAGCGGAGCCATGTCT...CATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640813.1
CDS-3UTR CCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGCTGAGGATGGCAACCTaGGGCCAATCGCTGCACGGC +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQLRMAT*GQSLHG
Trigger: GCCGTGCAGCGATTGGCCCCAGGTTGCCATCCTCAG...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR CCA 90 bp CAGCATACATGCATTCCTCAGGGTGCAGGATCTGCCCCACCCGGTTGTGCCAGCCTGGTCAAGTGTACCTaGCCCACAGCATACATGCAT +
Preference number: 4 (lower is better)
Translates to: QHTCIPQGAGSAPPGCASLVKCT*PTAYMH
Trigger: ATGCATGTATGCTGTGGGCCAGGTACACTTGACCAG...GCTGGCACAACCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCATGTATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CCA 90 bp CGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGCTGCTCGTCCCTGAGAATGCTATTCTaGGGAAGCAGATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RCRPAVARMMALNSCCSSLRMLF*GSRCRR
Trigger: CCTTCTGCATCTGCTTCCCCAGAATAGCATTCTCAG...GGACGAGCAGCAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CCA 90 bp CCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGCAATGGCGCAAAGCATaGGACCACCTCTATCTACTT +
Preference number: 4 (lower is better)
Translates to: PAHALQASCCQDDGTELLQWRKA*DHLYLL
Trigger: AAGTAGATAGAGGTGGTCCCATGCTTTGCGCCATTG...CAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
3UTR CAA 72 bp AACTCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTaGAGGTTTCCCCGAATACTCCTGAACTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: NSCCSSSFRSRV*RFPRILLNSRC
Trigger: GCATCTGGAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCATTCCCCGAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPFPEYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAA...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATTTCCCCGAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDFPEYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAA...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTTCCCCGAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPFPEYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAA...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTTCCCCGAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVFPEYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp TCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCCTTCCCCGAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: SSSFRSRVLRFPRILLNSFPEYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAA...GGAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATTCCGAAGCCGGGTGTTaGGGTTTCCCCGAATACTCC +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENSEAGC*GFPEYS
Trigger: GGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGA...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp ACATCCAGGATGTTTTTGGCTCCTTTGCTCAGCAACAAGTTGGCCAGGCTGATGGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: TSRMFLAPLLSNKLARLMVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...CATCAGCCTGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAATCCCTGGAAGGCTTaGACCCTGCAGTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDNPWKA*TLQFSL
Trigger: GAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGAATCCCTGGAAGGCTTaGACCCTGCAGTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGNPWKA*TLQFSL
Trigger: GAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATT...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATATCAAGGCCCCAAGGTaGGGCAAATCCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENIKAPR*GKSLEG
Trigger: GCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGAT...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGAAGCCCCCACATACTaGGGAGGCAAGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENEAPTY*GGKAVI
Trigger: GATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTC...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp ATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGAAGCACGGGGTGGTCAAGAAGTaGAGACAGATGGTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: MRVFPLADGSDGEARRKHGVVKK*RQMVLD
Trigger: GTCAAGGACCATCTGTCTTCACTTCTTGACCACCCC...GTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR TCA 90 bp ATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGAAGCACCTAGAGTCTGGCCTCTaGTTCACAATCTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: MRVFPLADGSDGEARRKHLESGL*FTIFPA
Trigger: GGCTGGGAAGATTGTGAATCAGAGGCCAGACTCTAG...GTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR TCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATCTTCCAATAGACGACTaGGGATGGCAACCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENLPIDD*GWQPGA
Trigger: GGCCCCAGGTTGCCATCCTCAGTCGTCTATTGGAAG...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR GCA 90 bp CTGGCCCACAGCATACATGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGAGCAAGCTGGCTCTTaGGGGTACCCACGCGAATCA +
Preference number: 4 (lower is better)
Translates to: LAHSIHAFLRVQDYMPDTEQAGS*GYPRES
Trigger: TGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC...AGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTCACTGTCCGTCTGTATaGGAGCAAGCTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSHCPSV*EQAGSC
Trigger: GCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTG...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACCACTGTCCGTCTGTATaGGAGCAAGCTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHHCPSV*EQAGSC
Trigger: GCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTG...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCACACTGTCCGTCTGTATaGGAGCAAGCTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSHCPSV*EQAGSC
Trigger: GCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTG...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCACTGTCCGTCTGTATaGGAGCAAGCTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITHCPSV*EQAGSC
Trigger: GCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTG...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGCACTGTCCGTCTGTATaGGAGCAAGCTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEHCPSV*EQAGSC
Trigger: GCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTG...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCCGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVRGFQC*HHTVRL
Trigger: CAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCG...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCCGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPRGFQC*HHTVRL
Trigger: CAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCG...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGATGGCAATGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: PKFWAANWGPRGMLRAVMAMISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCATTGC...CATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGAAGCACCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MRVFPLADGSDGEARRKHLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...GTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCACTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENALNSC*SSSFRS
Trigger: GCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGC...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCCAGATGCTGCAGGCCAGCTGTTaGCAGGATGATGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: QLPKPGVEVSPNTPELQMLQASC*QDDGTE
Trigger: TTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAG...CATCTGGAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAGGTTGTGCCAGCCCATaGGCTGCAGGCCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSGCASP*AAGQLL
Trigger: CAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACC...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGATGCATTCCTCAGGGTaGAGGATCTGCCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQMHSSG*RICPTR
Trigger: CCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCAT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEGPQHT*IPQGAG
Trigger: TCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCC...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSGPQHT*IPQGAG
Trigger: TCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCC...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTGCAGCCTCAGCCTCCTTCCAGGTaGCTCAGGAAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: YSCPSFIAVCTATGTLQPQPPSR*LRKALS
Trigger: TGAAAGGGCCTTCCTGAGGCACCTGGAAGGAGGCTG...AGGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTTCAGGGCCATCTTCATaGTGGGCAGGGACATGGATG +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSSGPSS*WAGTWM
Trigger: CATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGA...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGTCAGGGCCATCTTCATaGTGGGCAGGGACATGGATG +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSESGPSS*WAGTWM
Trigger: CATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGA...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGGGCCATCTTCATaGTGGGCAGGGACATGGATG +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSSGPSS*WAGTWM
Trigger: CATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGA...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCATGGGCATCGTTAAGCTaGCGTGCAACATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPWASLS*RATSRM
Trigger: CATCCTGGATGTTGCACGGCAGCTTAACGATGCCCA...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGGGCATCGTTAAGCTaGCGTGCAACATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPWASLS*RATSRM
Trigger: CATCCTGGATGTTGCACGGCAGCTTAACGATGCCCA...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATTGGGCATCGTTAAGCTaGCGTGCAACATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDWASLS*RATSRM
Trigger: CATCCTGGATGTTGCACGGCAGCTTAACGATGCCCA...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCTCAGGGTTTTCTTCCGCCGTTaGAGCCGCATTGCCGTTACC +
Preference number: 4 (lower is better)
Translates to: PSWNVTSSDAYQLWVILRVFFRR*SRIAVT
Trigger: GGTAACGGCAATGCGGCTGCAACGGCGGAAGAAAAC...CCTGAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTTTTCTTCCGCCGTTaGAGCCGCATTGCCGTTACC +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSVFFRR*SRIAVT
Trigger: GGTAACGGCAATGCGGCTGCAACGGCGGAAGAAAAC...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000442944.7
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTCCCTGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPSLISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGGGA...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442944.7
ENST00000650101.1
CDS-3UTR GCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGCTAAATCTAGAGCCGTaGATCCCAGGCCTGATGGGA +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGLNLEP*IPGLMG
Trigger: TCCCATCAGGCCTGGGATGCACGGCTCTAGATTTAG...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR GCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCACAAAGGGGCCGTATCTaGATCCGCCTCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSQRGRI*IRLSPA
Trigger: GGCTGGGCTGAGGCGGATGCAGATACGGCCCCTTTG...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR GCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATTCTGCAGTTTGTCTGTaGACAAGCCCAGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENSAVCL*TSPGLG
Trigger: GCCGAGCCCTGGGCTTGTGCACAGACAAACTGCAGA...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATTGTATGCGAGCAAGCTaGCTCTTGCGGGTACCCACG +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENCMRAS*LLRVPT
Trigger: CGTGGGTACCCGCAAGAGCCAGCTTGCTCGCATACA...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CTTTTCTCTCCAATCTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGTGTATGCGAGCAAGCTaGCTCTTGCGGGTACCCACG +
Preference number: 4 (lower is better)
Translates to: LFSPIFRTGSSPEGISGQCMRAS*LLRVPT
Trigger: CGTGGGTACCCGCAAGAGCCAGCTTGCTCGCATACA...CTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAGATTGGAGAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR CCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCACAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCTCAGGGCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: PRGMLRAVMPTNCGSSSGQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...CCCTGAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCACTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENRCPGP*LALPRP
Trigger: TGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCT...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCC +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDRSKMS*SLARTS
Trigger: GGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCC +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVRSKMS*SLARTS
Trigger: GGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCC +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGRSKMS*SLARTS
Trigger: GGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCT...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTGTATGCACGGCTACTaGCACACTGCAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSCMHGY*HTAASF
Trigger: GAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACA...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCATGTATGCACGGCTACTaGCACACTGCAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSCMHGY*HTAASF
Trigger: GAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACA...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCTCAGGTGTATGCACGGCTACTaGCACACTGCAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSWNVTSSDAYQLWVILRCMHGY*HTAASF
Trigger: GAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACA...CCTGAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTTGTATGCACGGCTACTaGCACACTGCAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITCMHGY*HTAASF
Trigger: GAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACA...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGGGCCATCTTCATGCTaGGCAGGGACATGGATGGTA +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITGPSSC*AGTWMV
Trigger: TACCATCCATGTCCCTGCCCAGCATGAAGATGGCCC...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGGGGCCATCTTCATGCTaGGCAGGGACATGGATGGTA +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEGPSSC*AGTWMV
Trigger: TACCATCCATGTCCCTGCCCAGCATGAAGATGGCCC...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGATGCCTACCAACTGTaGGTCATCCTCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSDAYQL*VILRAI
Trigger: GATGGCCCTGAGGATGACCCACAGTTGGTAGGCATC...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTGATGCCTACCAACTGTaGGTCATCCTCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSDAYQL*VILRAI
Trigger: GATGGCCCTGAGGATGACCCACAGTTGGTAGGCATC...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCACAACTGGGGCCCTCGTaGAATGTTACGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPQLGPS*NVTSSD
Trigger: ATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTG...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATCAACTGGGGCCCTCGTaGAATGTTACGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDQLGPS*NVTSSD
Trigger: ATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTG...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTTCTGGGCAGCCAACTaGGGCCCTCGTGGAATGTTA +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHFWAAN*GPRGML
Trigger: TAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAA...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTTTCTGGGCAGCCAACTaGGGCCCTCGTGGAATGTTA +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITFWAAN*GPRGML
Trigger: TAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAA...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGCTGATGCCCAAGTTCTaGGCAGCCAACTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQLMPKF*AANWGP
Trigger: AGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAG...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGCCGGGATGTAGGCACTaGACAGCAGCAACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQPGCRH*TAATQA
Trigger: TGCCTGGGTTGCTGCTGTCCAGTGCCTACATCCCGG...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGAATCTTGTCCCCTGTGGTGGACATAGCAACTTCAGAACTGGGAGCAGCCCAGAAAGTAGGCTGTGTGTaGGTGCCGCTAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RILSPVVDIATSELGAAQKVGCV*VPLRSP
Trigger: GGGGGACCTTAGCGGCACCCACACACAGCCTACTTT...CTGGGCTGCTCCCAGTTCTGAAGTTGCTATGTCCACCACAGGGGACAAGATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR CCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGACATGGCTCCGCTTaGAAAGTAGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDRHGSA*KVGCVW
Trigger: CCACACACAGCCTACTTTCCAAGCGGAGCCATGTCT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCAGACATGGCTCCGCTTaGAAAGTAGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVRHGSA*KVGCVW
Trigger: CCACACACAGCCTACTTTCCAAGCGGAGCCATGTCT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp ATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGAAGCACAGACATGGCTCCGCTTaGAAAGTAGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: MRVFPLADGSDGEARRKHRHGSA*KVGCVW
Trigger: CCACACACAGCCTACTTTCCAAGCGGAGCCATGTCT...GTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR CCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGCRYQT*LRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCA...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAAAGCCCAAAGTGTGCTaGTCACCGGCTCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSKPKVC*SPAQHS
Trigger: TGAGTGCTGAGCCGGTGACCAGCACACTTTGGGCTT...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR CCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCATTGGAGCGTTGGCTGTaGCTGGGAGACCACTATAAC +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPLERWL*LGDHYN
Trigger: GTTATAGTGGTCTCCCAGCCACAGCCAACGCTCCAA...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR CCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTTTTCTTATCTCGGCCTaGCAGTGGCCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITFLISA*QWPPPA
Trigger: AGCTGGTGGAGGCCACTGCCAGGCCGAGATAAGAAA...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR TCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCAGGTCCTTCAAGGAGTaGACAACCAGGTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVRSFKE*TTRSTS
Trigger: TGAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp ACCAACTGTGGGTCATCCTCAGGGCCATCTTCATGCTGGGCAGGGACATGGATGAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TNCGSSSGPSSCWAGTWMKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...CATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGAGGATGACCCACAGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGGAATGTTACGAGCAGTaGTGCCTACCAACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGECYEQ*CLPTVG
Trigger: ACCCACAGTTGGTAGGCATCACTGCTCGTAACATTC...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCGAATGTTACGAGCAGTaGTGCCTACCAACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPECYEQ*CLPTVG
Trigger: ACCCACAGTTGGTAGGCATCACTGCTCGTAACATTC...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGTGAGAATGGGGCACTaGGGCCCGGGATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEVRMGH*GPGCRH
Trigger: GTGCCTACATCCCGGGCCTCAGTGCCCCATTCTCAC...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACAATCCCTGGAAGGCTTaGACCCTGCAGTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHNPWKA*TLQFSL
Trigger: GAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATT...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTAATCCCTGGAAGGCTTaGACCCTGCAGTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSNPWKA*TLQFSL
Trigger: GAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATT...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGGAAGCCCCCACATACTaGGGAGGCAAGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQEAPTY*GGKAVI
Trigger: GATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTC...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AGTCAGGTACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTGAAGCCCCCACATACTaGGGAGGCAAGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: SQVQLPILHSCMHGYWHTEAPTY*GGKAVI
Trigger: GATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTC...AGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTACCTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp CTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTCTTCTCTTTACATCAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: LCSWAALRRELVPTTLFSLHQYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAA...AGAGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGGGCGATAGTAGGACCTaGTGTTGCTGCCGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQGDSRT*CCCRCS
Trigger: ACTGCAGCGGCAGCAACAGCAGGTCCTACTATCGCC...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392841.1
ENST00000648374.1
CDS-3UTR GCA 90 bp GCAGGGACATGGATGGTAGCCTGCATGGTCTCTTGTATGCTATCTGAGCCGTCTCACTGTCCGTCTGTATaGGAGCAAGCTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AGTWMVACMVSCMLSEPSHCPSV*EQAGSC
Trigger: GCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTG...AGACGGCTCAGATAGCATACAAGAGACCATGCAGGCTACCATCCATGTCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGCGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSERGFQC*HHTVRL
Trigger: CAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCG...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTCGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSRGFQC*HHTVRL
Trigger: CAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCG...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATGCAATGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDAMISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCATTGC...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GATCTTTCCCCAACCAATGGCGCAAAGCATGGGACCACCTCTATCTACTTGCTCGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: DLSPTNGAKHGTTSIYLLALNSC*SSSFRS
Trigger: GCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGC...GAGCAAGTAGATAGAGGTGGTCCCATGCTTTGCGCCATTGGTTGGGGAAAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR GCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATCTGCAGGCCAGCTGTTaGCAGGATGATGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENLQASC*QDDGTE
Trigger: TTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAG...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAATGCATTCCTCAGGGTaGAGGATCTGCCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSMHSSG*RICPTR
Trigger: CCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCAT...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENGPQHT*IPQGAG
Trigger: TCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCC...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGAGAGTCTCGGGATCGTaGAGCACACCCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQRVSGS*STPTRS
Trigger: GGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGTCAGGTACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTCAGCCTCCTTCCAGGTaGCTCAGGAAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SQVQLPILHSCMHGYWHTQPPSR*LRKALS
Trigger: TGAAAGGGCCTTCCTGAGGCACCTGGAAGGAGGCTG...AGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTACCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCTTCATAGCTGTATaGACGGCTACTGGCACACTG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVSFIAV*TATGTL
Trigger: CAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCATCCTTCATAGCTGTATaGACGGCTACTGGCACACTG +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPSFIAV*TATGTL
Trigger: CAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGA...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGTCCTTCATAGCTGTATaGACGGCTACTGGCACACTG +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGSFIAV*TATGTL
Trigger: CAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGA...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTTGGGCATCGTTAAGCTaGCGTGCAACATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSWASLS*RATSRM
Trigger: CATCCTGGATGTTGCACGGCAGCTTAACGATGCCCA...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCATGGGCATCGTTAAGCTaGCGTGCAACATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSWASLS*RATSRM
Trigger: CATCCTGGATGTTGCACGGCAGCTTAACGATGCCCA...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGTGGGCATCGTTAAGCTaGCGTGCAACATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEWASLS*RATSRM
Trigger: CATCCTGGATGTTGCACGGCAGCTTAACGATGCCCA...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCCAACCCAGGCATCTGTaGCCCACAAACCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPQPRHL*PTNQLM
Trigger: CATTAACTGGTTTGTGGGGCACAGATGCCTGGGTTG...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATCAACCCAGGCATCTGTaGCCCACAAACCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDQPRHL*PTNQLM
Trigger: CATTAACTGGTTTGTGGGGCACAGATGCCTGGGTTG...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGCAACCCAGGCATCTGTaGCCCACAAACCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGQPRHL*PTNQLM
Trigger: CATTAACTGGTTTGTGGGGCACAGATGCCTGGGTTG...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQGRLEP*SSVSRG
Trigger: ACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCC...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTGCCGTGCAACATCCAGGATGTTTTTGGCTCCTTTGCTCAGCAACAAGTTGGCGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LPCNIQDVFGSFAQQQVGGRLEP*SSVSRG
Trigger: ACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCC...GCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATGTTGCACGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp AGCCAGAAATGTTGTGTTCTCTCCTCTCGGGGTACTGGGCTTCCCATTAGCTTCCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTC +
Preference number: 4 (lower is better)
Translates to: SQKCCVLSSRGTGLPISFPLQPH*RYQTWL
Trigger: GAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGG...GAAGCTAATGGGAAGCCCAGTACCCCGAGAGGAGAGAACACAACATTTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR GCA 90 bp CACAGTGGGCAGGTCCTTCAAGGAGTGAACAACCAGGTCCACTTCATTCTTCTCCACTGTCCGTCTGTATaGGAGCAAGCGCCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HSGQVLQGVNNQVHFILLHCPSV*EQAPLQ
Trigger: CTGCAACGGCGCTTGCTCGCATACAGACGGACAGTG...GAGAAGAATGAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCTGCCCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535793.5
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAAACCAGAATCACTTCTaGCCTCCTCAGGGATCCAGA +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPNQNHF*PPQGSR
Trigger: TCTGGATCCCTGAGGAGGGCAGAAGTGATTCTGGTT...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648374.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGGGCTCTGGAATGACTaGAAGAGCAAAGATCCCAGC +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSGLWND*KSKDPS
Trigger: GCTGGGATCTTTGCTCTTGCAGTCATTCCAGAGCCC...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTGCAGCCTCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: YSCPSFIAVCTATGTLQPQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...AGGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp ACATCCAGGATGTTTTTGGCTCCTTTGCTCAGCAACAAGTTGGCCAGGCTGATGACGCCCAAGGCCCCCTaGCCCACAGCATACATGCAT +
Preference number: 4 (lower is better)
Translates to: TSRMFLAPLLSNKLARLMTPKAP*PTAYMH
Trigger: ATGCATGTATGCTGTGGGCCAGGGGGCCTTGGGCGT...CATCAGCCTGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648026.1
CDS-3UTR CCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAACGCCCAAGGCCCCCTaGCCCACAGCATACATGCAT +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSTPKAP*PTAYMH
Trigger: ATGCATGTATGCTGTGGGCCAGGGGGCCTTGGGCGT...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCC +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSRSKMS*SLARTS
Trigger: GGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCT...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCC +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHRSKMS*SLARTS
Trigger: GGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCT...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATTGTATGCACGGCTACTaGCACACTGCAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENCMHGY*HTAASF
Trigger: GAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACA...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTGCTGGGCAGGGACATaGATGGTAGCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQCWAGT*MVACMV
Trigger: GACCATGCAGGCTACCATCCATGTCCCTGCCCAGCA...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTGCAGCCTGGGCCATCTTCATGCTaGGCAGGGACATGGATGGTA +
Preference number: 4 (lower is better)
Translates to: YSCPSFIAVCTATGTLQPGPSSC*AGTWMV
Trigger: TACCATCCATGTCCCTGCCCAGCATGAAGATGGCCC...AGGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGCCATCTTCATGCTaGGCAGGGACATGGATGGTA +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENGPSSC*AGTWMV
Trigger: TACCATCCATGTCCCTGCCCAGCATGAAGATGGCCC...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGATGCCTACCAACTGTaGGTCATCCTCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENDAYQL*VILRAI
Trigger: GATGGCCCTGAGGATGACCCACAGTTGGTAGGCATC...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTCAACTGGGGCCCTCGTaGAATGTTACGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSQLGPS*NVTSSD
Trigger: ATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTG...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACCAACTGGGGCCCTCGTaGAATGTTACGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHQLGPS*NVTSSD
Trigger: ATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTG...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGCAACTGGGGCCCTCGTaGAATGTTACGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEQLGPS*NVTSSD
Trigger: ATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTG...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGAGTACCGGGGACACGTaGGACCCGAGGTCGTCCTAC +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEESTGDT*DPRSSY
Trigger: GTAGGACGACCTCGGGTCCCACGTGTCCCCGGTACT...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000652429.1
CDS-3UTR CCA 90 bp GATCTTTCCCCAACCAATGGCGCAAAGCATGGGACCACCTCTATCTACTTGCTCAAAGTAGGCTGTGTGTaGGTGCCGCTAAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: DLSPTNGAKHGTTSIYLLKVGCV*VPLRSP
Trigger: GGGGGACCTTAGCGGCACCCACACACAGCCTACTTT...GAGCAAGTAGATAGAGGTGGTCCCATGCTTTGCGCCATTGGTTGGGGAAAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTAGACATGGCTCCGCTTaGAAAGTAGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSRHGSA*KVGCVW
Trigger: CCACACACAGCCTACTTTCCAAGCGGAGCCATGTCT...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAAGACATGGCTCCGCTTaGAAAGTAGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSRHGSA*KVGCVW
Trigger: CCACACACAGCCTACTTTCCAAGCGGAGCCATGTCT...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCATGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSCRYQT*LRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCA...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITCRYQT*LRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCA...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSCRYQT*LRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCA...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSCRYQT*LRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCA...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GAGCAGCCCAGAAGGAATCTCGGGGCAGCGGGACGGGCTTTAGCTATAGGCAAATCCAATCTTCAGAACTaGGAGCAGCCCAGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: EQPRRNLGAAGRALAIGKSNLQN*EQPRRN
Trigger: ATTCCTTCTGGGCTGCTCCCAGTTCTGAAGATTGGA...TTTGCCTATAGCTAAAGCCCGTCCCGCTGCCCCGAGATTCCTTCTGGGCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR CCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATCCTAGTCCAGGGCTCTaGAATGACTGCAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDPSPGL*NDCKSK
Trigger: TTTGCTCTTGCAGTCATTCCAGAGCCCTGGACTAGG...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650101.1
3UTR CAA 72 bp TCCAGGATGTTTTTGGCTCCTTTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: SRMFLAPLLSNK*ARLMPKFWAAN
Trigger: GTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
3UTR CAA 72 bp AGCTGCCGTGCAACATCCAGGATGTTTTTGGCTCCTTaGCTCAGCAACAAGTTGGCCAGGCTGATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SCRATSRMFLAP*LSNKLARLMPK
Trigger: CTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATGTTGCACGGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp GTTTCCCCGAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCAGCTGGGCAGGTCCTTCAAGGAGTaGACAACCAGGTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: VSPNTPELQMRELSLQLGRSFKE*TTRSTS
Trigger: TGAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCT...GCCCAGCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAGGTCCTTCAAGGAGTaGACAACCAGGTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSERSFKE*TTRSTS
Trigger: TGAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AGGAGTGAACAACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: RSEQPGPLHSSPGHVQAPRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...AGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGTTGTTCACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp TCTAGACTCCAGACTCCTCCAGTCAGGTACAGTTGCCCATCCTTCATAGCTGTAAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: SRLQTPPVRYSCPSFIAVRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...TACAGCTATGAAGGATGGGCAACTGTACCTGACTGGAGGAGTCTGGAGTCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCCAGATGCGGGAACTTTCTTTCCCCGAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: PGVEVSPNTPELQMRELSFPEYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAA...AGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGGAATGTTACGAGCAGTaGTGCCTACCAACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEECYEQ*CLPTVG
Trigger: ACCCACAGTTGGTAGGCATCACTGCTCGTAACATTC...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAATGTTACGAGCAGTaGTGCCTACCAACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSECYEQ*CLPTVG
Trigger: ACCCACAGTTGGTAGGCATCACTGCTCGTAACATTC...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGAATGTTACGAGCAGTaGTGCCTACCAACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSECYEQ*CLPTVG
Trigger: ACCCACAGTTGGTAGGCATCACTGCTCGTAACATTC...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGAATGTTACGAGCAGTaGTGCCTACCAACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITECYEQ*CLPTVG
Trigger: ACCCACAGTTGGTAGGCATCACTGCTCGTAACATTC...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAACAAGTTGGCCAGGCTaGTGCCCAAGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSTSWPG*CPSSGQ
Trigger: CTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGT...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATAATCCCTGGAAGGCTTaGACCCTGCAGTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENNPWKA*TLQFSL
Trigger: GAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATT...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAATCAAGGCCCCAAGGTaGGGCAAATCCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSIKAPR*GKSLEG
Trigger: GCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGAT...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAGAAGCCCCCACATACTaGGGAGGCAAGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSEAPTY*GGKAVI
Trigger: GATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTC...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATACTTCTCTAAAGAGATaGAGCCCCCACATACTGAGG +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDTSLKR*SPHILR
Trigger: CCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAACTTCTCTAAAGAGATaGAGCCCCCACATACTGAGG +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPTSLKR*SPHILR
Trigger: CCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGT...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCACTTCTCTAAAGAGATaGAGCCCCCACATACTGAGG +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPTSLKR*SPHILR
Trigger: CCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGT...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCCAAGAATCTTGTCCCTaGTTTCAAACTGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVQESCP*FQTAGQ
Trigger: CTGGCCTGCAGTTTGAAATCAGGGACAAGATTCTTG...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442944.7
ENST00000650101.1
CDS-3UTR TCA 90 bp GAGCAGCCCAGAAGGAATCTCGGGGCAGCGGGACGGGCTTTAGCTATAGGCAAATTCCAGAAAACTCACTaGTTTCAAACTGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: EQPRRNLGAAGRALAIGKFQKTH*FQTAGQ
Trigger: CTGGCCTGCAGTTTGAAATCAGTGAGTTTTCTGGAA...TTTGCCTATAGCTAAAGCCCGTCCCGCTGCCCCGAGATTCCTTCTGGGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR GCA 90 bp AGGTTTCCCCGAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCAGCTGGCGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: RFPRILLNSRCGNFLCSWRGFQC*HHTVRL
Trigger: CAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCG...CCAGCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATCGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENRGFQC*HHTVRL
Trigger: CAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCG...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACGCAATGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHAMISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCATTGC...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGCAATGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSAMISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCATTGC...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGVEVSPNTPELQMRELSLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...AGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp GCAGGGACATGGATGGTAGCCTGCATGGTCTCTTGTATGCTATCTGAGCCGTCTCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AGTWMVACMVSCMLSEPSLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...AGACGGCTCAGATAGCATACAAGAGACCATGCAGGCTACCATCCATGTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAGTGGGCAGGTCCTTCAAGGAGTGAACAACCAGGTCCACTTCATTCTTCTCCAATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: QWAGPSRSEQPGPLHSSPMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...TGGAGAAGAATGAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCTGCCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp CTGATCTTTCCCCAACCAATGGCGCAAAGCATGGGACCACCTCTATCTACTTGCATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: LIFPQPMAQSMGPPLSTCMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...GCAAGTAGATAGAGGTGGTCCCATGCTTTGCGCCATTGGTTGGGGAAAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQGPQHT*IPQGAG
Trigger: TCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCC...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAAGAGTCTCGGGATCGTaGAGCACACCCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSRVSGS*STPTRS
Trigger: GGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCT...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCATCCTTCATAGCTGTATaGACGGCTACTGGCACACTG +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSSFIAV*TATGTL
Trigger: CAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGA...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTTCCTTCATAGCTGTATaGACGGCTACTGGCACACTG +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSSFIAV*TATGTL
Trigger: CAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGA...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGATGACATGGATGGTAGCCTaGATGGTCTCTTGTATGCTA +
Preference number: 4 (lower is better)
Translates to: PKFWAANWGPRGMLRAVMTWMVA*MVSCML
Trigger: TAGCATACAAGAGACCATGCAGGCTACCATCCATGT...CATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCAGGGCCATCTTCATaGTGGGCAGGGACATGGATG +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQSGPSS*WAGTWM
Trigger: CATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGA...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTCAACCCAGGCATCTGTaGCCCACAAACCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSQPRHL*PTNQLM
Trigger: CATTAACTGGTTTGTGGGGCACAGATGCCTGGGTTG...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTCAACCCAGGCATCTGTaGCCCACAAACCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSQPRHL*PTNQLM
Trigger: CATTAACTGGTTTGTGGGGCACAGATGCCTGGGTTG...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCAACCCAGGCATCTGTaGCCCACAAACCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITQPRHL*PTNQLM
Trigger: CATTAACTGGTTTGTGGGGCACAGATGCCTGGGTTG...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCACCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTC +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSPLQPH*RYQTWL
Trigger: GAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGG...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000652429.1
CDS-3UTR GCA 90 bp TCCTTGGTAAACAGGCTTTTCTCTCCAATCTTCAGAACTGGGAGCAGCCCAGAAAGCACTCACCGCCGTTaGAGCCGCATTGCCGTTACC +
Preference number: 4 (lower is better)
Translates to: SLVNRLFSPIFRTGSSPESTHRR*SRIAVT
Trigger: GGTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCT...TTCTGGGCTGCTCCCAGTTCTGAAGATTGGAGAGAAAAGCCTGTTTACCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR CCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCATGTATGCGAGCAAGCTaGCTCTTGCGGGTACCCACG +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSCMRAS*LLRVPT
Trigger: CGTGGGTACCCGCAAGAGCCAGCTTGCTCGCATACA...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GGTTACATCAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCAGCTGGGCCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: GYINTPELQMRELSLQLGQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...GCCCAGCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR CCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSRCPGP*LALPRP
Trigger: TGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCT...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATCAACTGGGGCCCTCGTaGAATGTTACGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENQLGPS*NVTSSD
Trigger: ATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTG...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGAGTACCGGGGACACGTaGGACCCGAGGTCGTCCTAC +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTESTGDT*DPRSSY
Trigger: GTAGGACGACCTCGGGTCCCACGTGTCCCCGGTACT...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000652429.1
CDS-3UTR CCA 90 bp GAGAGTGCAGTATCAAGAATCTTGTCCCCTGTGGTGGACATAGCAACTTCAGAAAGTACCGGGGACACGTaGGACCCGAGGTCGTCCTAC +
Preference number: 4 (lower is better)
Translates to: ESAVSRILSPVVDIATSESTGDT*DPRSSY
Trigger: GTAGGACGACCTCGGGTCCCACGTGTCCCCGGTACT...TTCTGAAGTTGCTATGTCCACCACAGGGGACAAGATTCTTGATACTGCACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR CCA 90 bp AGGTTTCCCCGAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCAGCTGGAGACATGGCTCCGCTTaGAAAGTAGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RFPRILLNSRCGNFLCSWRHGSA*KVGCVW
Trigger: CCACACACAGCCTACTTTCCAAGCGGAGCCATGTCT...CCAGCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATAGACATGGCTCCGCTTaGAAAGTAGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENRHGSA*KVGCVW
Trigger: CCACACACAGCCTACTTTCCAAGCGGAGCCATGTCT...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCCAGATGCGGGAACTTTCTTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: PGVEVSPNTPELQMRELSCRYQT*LRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCA...AGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CCA 90 bp CCATCTTCATGCTGGGCAGGGACATGGATGGTAGCCTGCATGGTCTCTTGTATGTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: PSSCWAGTWMVACMVSCMCRYQT*LRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCA...CATACAAGAGACCATGCAGGCTACCATCCATGTCCCTGCCCAGCATGAAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640813.1
CDS-3UTR CCA 90 bp GGCATGTTCAAGCTCCTTGGTAAACAGGCTTTTCTCTCCAATCTTCAGAACTGGCTGAGGATGGCAACCTaGGGCCAATCGCTGCACGGC +
Preference number: 4 (lower is better)
Translates to: GMFKLLGKQAFLSNLQNWLRMAT*GQSLHG
Trigger: GCCGTGCAGCGATTGGCCCCAGGTTGCCATCCTCAG...CCAGTTCTGAAGATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR CCA 90 bp ATCTTTCCCCAACCAATGGCGCAAAGCATGGGACCACCTCTATCTACTTGCTCCACCATGTGGCTTCCCTaGTCAAGTGTACCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: IFPQPMAQSMGPPLSTCSTMWLP*SSVPGP
Trigger: TGGGCCAGGTACACTTGACCAGGGAAGCCACATGGT...GGAGCAAGTAGATAGAGGTGGTCCCATGCTTTGCGCCATTGGTTGGGGAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CCA 90 bp AACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTTGGTAAACAGCTCCCCAGCGCCTTTTaGACCGGTAGCATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: NQVHFILLQGMFKLLGKQLPSAF*TGSIPR
Trigger: CCTTGGGATGCTACCGGTCCAAAAGGCGCTGGGGAG...CTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCACGAACGTTCTTGGTCTaGGTCACTAAATCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPRTFLV*VTKSRA
Trigger: GGCTCTAGATTTAGTGACCCAGACCAAGAACGTTCG...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR CCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTAGCGTTGGCTGTGGCTaGGAGACCACTATAACACAA +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSSVGCG*ETTITQ
Trigger: TTGTGTTATAGTGGTCTCCCAGCCACAGCCAACGCT...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650101.1
3UTR CAA 72 bp GCATCGTTAAGCTGCCGTGCAACATCCAGGATGTTTTaGGCTCCTTTGCTCAGCAACAAGTTGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ASLSCRATSRMF*APLLSNKLARL
Trigger: CAGCCTGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATGTTGCACGGCAGCTTAACGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEERWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CTGGCCCACAGCATACATGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LAHSIHAFLRVQDYMPDTKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...AGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR TCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTTCCCCGAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQFPEYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAA...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGTCCGAAGCCGGGTGTTaGGGTTTCCCCGAATACTCC +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEESEAGC*GFPEYS
Trigger: GGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGA...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGACAAGTTGGCCAGGCTaGTGCCCAAGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEETSWPG*CPSSGQ
Trigger: CTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGT...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGAATCCCTGGAAGGCTTaGACCCTGCAGTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQNPWKA*TLQFSL
Trigger: GAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGAAGCCCCCACATACTaGGGAGGCAAGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEEAPTY*GGKAVI
Trigger: GATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTC...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGACTTCTCTAAAGAGATaGAGCCCCCACATACTGAGG +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSETSLKR*SPHILR
Trigger: CCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp TGTGAGACAAGCTTCTTGGTTGAGAACAAAGGGAAGGCATATGTCACCATGTGGGGTCGTCCTACAGTCTaGCTCCTGGTCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: CETSFLVENKGKAYVTMWGRPTV*LLVSAE
Trigger: CTCTGCGGAGACCAGGAGTCAGACTGTAGGACGACC...CCACATGGTGACATATGCCTTCCCTTTGTTCTCAACCAAGAAGCTTGTCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR TCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCAAGAATCTTGTCCCTaGTTTCAAACTGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITQESCP*FQTAGQ
Trigger: CTGGCCTGCAGTTTGAAATCAGGGACAAGATTCTTG...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442944.7
ENST00000650101.1
CDS-3UTR TCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATTTACATCAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDLHQYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAA...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp ACTTTCTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTCTTGTAAATTTTCTCCATaGAAGCCTAGAGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TFSAAGLLFAGSWFPPHSCKFSP*KPRVWP
Trigger: AGGCCAGACTCTAGGCTTTCATGGAGAAAATTTACA...AGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR GCA 90 bp CAGCATACATGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGGACCTGCTGTTGCTaGCGCTGCAGTAACCAGGAC +
Preference number: 4 (lower is better)
Translates to: QHTCIPQGAGLHARHCSKRTCCC*RCSNQD
Trigger: GTCCTGGTTACTGCAGCGGCAGCAACAGCAGGTCCT...TTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCATGTATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR GCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCACACTGTCCGTCTGTATaGGAGCAAGCTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSHCPSV*EQAGSC
Trigger: GCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTG...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAGTGGGCAGGTCCTTCAAGGAGTGAACAACCAGGTCCACTTCATTCTTCTCCACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: QWAGPSRSEQPGPLHSSPRGFQC*HHTVRL
Trigger: CAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCG...TGGAGAAGAATGAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCTGCCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp CATACATGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HTCIPQGAGLHARHCSKSSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...ACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCATGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR GCA 90 bp ACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTTGGTAAACAGGATGGCACTGAACTCCTaGTGCTCGTCCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: TRSTSFFSRACSSSLVNRMALNS*CSSSFR
Trigger: TCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGCCAT...CCTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCACTGCAGGCCAGCTGTTaGCAGGATGATGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSLQASC*QDDGTE
Trigger: TTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAG...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGATGCATTCCTCAGGGTaGAGGATCTGCCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEMHSSG*RICPTR
Trigger: CCGGGTGGGGCAGATCCTGCACCCTGAGGAATGCAT...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGAGTGAACAACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSEQPGPLHSSPGHVQAPGPQHT*IPQGAG
Trigger: TCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCC...AGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGTTGTTCACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR GCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSGPQHT*IPQGAG
Trigger: TCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCC...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGAGAGTCTCGGGATCGTaGAGCACACCCACCAGATCC +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEERVSGS*STPTRS
Trigger: GGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCT...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCACATGGATGGTAGCCTaGATGGTCTCTTGTATGCTA +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPTWMVA*MVSCML
Trigger: TAGCATACAAGAGACCATGCAGGCTACCATCCATGT...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGACATGGATGGTAGCCTaGATGGTCTCTTGTATGCTA +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGTWMVA*MVSCML
Trigger: TAGCATACAAGAGACCATGCAGGCTACCATCCATGT...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATACATGGATGGTAGCCTaGATGGTCTCTTGTATGCTA +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDTWMVA*MVSCML
Trigger: TAGCATACAAGAGACCATGCAGGCTACCATCCATGT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGTGTTTTTGGCTCCTTTaGTCAGCAACAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGCFWLL*SATSWP
Trigger: TGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACA...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCATGTTTTTGGCTCCTTTaGTCAGCAACAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPCFWLL*SATSWP
Trigger: TGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACA...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTGTTTTTGGCTCCTTTaGTCAGCAACAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVCFWLL*SATSWP
Trigger: TGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATCAACCCAGGCATCTGTaGCCCACAAACCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENQPRHL*PTNQLM
Trigger: CATTAACTGGTTTGTGGGGCACAGATGCCTGGGTTG...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTTTCTCTCCAATCTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGTCACTGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: LFSPIFRTGSSPEGISGQSLISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGTGA...CTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAGATTGGAGAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR CCA 90 bp ACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTTGGTAAACAGGCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: TRSTSFFSRACSSSLVNRLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...CCTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCACTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCC +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQRSKMS*SLARTS
Trigger: GGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGTGCTGGGCAGGGACATaGATGGTAGCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEECWAGT*MVACMV
Trigger: GACCATGCAGGCTACCATCCATGTCCCTGCCCAGCA...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGCAACTGGGGCCCTCGTaGAATGTTACGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQQLGPS*NVTSSD
Trigger: ATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTG...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGCTGATGCCCAAGTTCTaGGCAGCCAACTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTELMPKF*AANWGP
Trigger: AGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAG...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCCATCCAGGATGTTTTTaGCTCCTTTGCTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPHPGCF*LLCSAT
Trigger: TGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATG...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCCATCCAGGATGTTTTTaGCTCCTTTGCTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVHPGCF*LLCSAT
Trigger: TGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATG...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATCATCCAGGATGTTTTTaGCTCCTTTGCTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDHPGCF*LLCSAT
Trigger: TGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATG...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCACATCCAGGATGTTTTTaGCTCCTTTGCTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPHPGCF*LLCSAT
Trigger: TGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATG...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGAGACATGGCTCCGCTTaGAAAGTAGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQRHGSA*KVGCVW
Trigger: CCACACACAGCCTACTTTCCAAGCGGAGCCATGTCT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCAATCACTCTCATCTTTaGGCTGTTTTCTTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVNHSHL*AVFFRR
Trigger: ACGGCGGAAGAAAACAGCCCAAAGATGAGAGTGATT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000442944.7
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GTGGACATAGCAACTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGCGTGAGACAAGCTTCTTaGTTGAGAACAAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VDIATSELGAAQKESRGSVRQAS*LRTKGR
Trigger: CCTTCCCTTTGTTCTCAACCAAGAAGCTTGTCTCAC...GCTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAGTTGCTATGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR TCA 90 bp TGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTACTTTCAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: CIPQGAGLHARHCSKSTFRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...GAAAGTACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR TCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCATTCCCCGAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSFPEYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAA...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGTCCGAAGCCGGGTGTTaGGGTTTCCCCGAATACTCC +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTESEAGC*GFPEYS
Trigger: GGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGA...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GCTGCCGTGCAACATCCAGGATGTTTTTGGCTCCTTTGCTCAGCAACAAGTTGGGAATGTTACGAGCAGTaGTGCCTACCAACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: AAVQHPGCFWLLCSATSWECYEQ*CLPTVG
Trigger: ACCCACAGTTGGTAGGCATCACTGCTCGTAACATTC...CCAACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATGTTGCACGGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR TCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGACAAGTTGGCCAGGCTaGTGCCCAAGTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTETSWPG*CPSSGQ
Trigger: CTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGT...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAAATCCCTGGAAGGCTTaGACCCTGCAGTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSNPWKA*TLQFSL
Trigger: GAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATT...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GGTCAAGTGTACCTGGCCCACAGCATACATGCATTCCTCAGGGTGCAGGATCTGTTCCAGAAAACTCACTaGTTTCAAACTGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GQVYLAHSIHAFLRVQDLFQKTH*FQTAGQ
Trigger: CTGGCCTGCAGTTTGAAATCAGTGAGTTTTCTGGAA...CAGATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAGGTACACTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR TCA 90 bp GTGAGACAAGCTTCTTGGTTGAGAACAAAGGGAAGGCATATGTCACCATGTGGCACGCCCAAGGCCCCCTaGTGGAAAAACATCCTAGGA +
Preference number: 4 (lower is better)
Translates to: VRQASWLRTKGRHMSPCGTPKAP*WKNILG
Trigger: TCCTAGGATGTTTTTCCATCAGGGGGCCTTGGGCGT...GCCACATGGTGACATATGCCTTCCCTTTGTTCTCAACCAAGAAGCTTGTCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR TCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAAGTATCACCGCTCTCTaGTTTCCCCATTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSSITAL*FPHSFR
Trigger: CCGGAAGGAATGGGGAAATCAGAGAGCGGTGATACT...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR GCA 90 bp GCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTACTTTCCCACTGTCCGTCTGTATaGGAGCAAGCTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AFLRVQDYMPDTALKVLSHCPSV*EQAGSC
Trigger: GCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTG...GGAAAGTACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR GCA 90 bp CTCAGCAACAAGTTGGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAACTGGGGCTCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: LSNKLARLMPKFWAANWGSNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...GCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCCAACTTGTTGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGCACTGAACTCCTGCTaGTCGTCCAGCTTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEALNSC*SSSFRS
Trigger: GCTTCGGAAGCTGGACGAGCAGCAGGAGTTCAGTGC...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEGPQHT*IPQGAG
Trigger: TCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCC...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGCAGCCTCCTTCCAGGTaGCTCAGGAAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEQPPSR*LRKALS
Trigger: TGAAAGGGCCTTCCTGAGGCACCTGGAAGGAGGCTG...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACACATGGATGGTAGCCTaGATGGTCTCTTGTATGCTA +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHTWMVA*MVSCML
Trigger: TAGCATACAAGAGACCATGCAGGCTACCATCCATGT...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGACATGGATGGTAGCCTaGATGGTCTCTTGTATGCTA +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSETWMVA*MVSCML
Trigger: TAGCATACAAGAGACCATGCAGGCTACCATCCATGT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTACATGGATGGTAGCCTaGATGGTCTCTTGTATGCTA +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSTWMVA*MVSCML
Trigger: TAGCATACAAGAGACCATGCAGGCTACCATCCATGT...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTACATGGATGGTAGCCTaGATGGTCTCTTGTATGCTA +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITTWMVA*MVSCML
Trigger: TAGCATACAAGAGACCATGCAGGCTACCATCCATGT...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGTTTTTGGCTCCTTTaGTCAGCAACAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHCFWLL*SATSWP
Trigger: TGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACA...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTTGTTTTTGGCTCCTTTaGTCAGCAACAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSCFWLL*SATSWP
Trigger: TGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACA...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTGTTTTTGGCTCCTTTaGTCAGCAACAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSCFWLL*SATSWP
Trigger: TGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACA...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGTGTTTTTGGCTCCTTTaGTCAGCAACAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSECFWLL*SATSWP
Trigger: TGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACA...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GTACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTGCAGCCTGTTTTTGGCTCCTTTaGTCAGCAACAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VQLPILHSCMHGYWHTAACFWLL*SATSWP
Trigger: TGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACA...GGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCATCGTTAAGCTGCCGTaGAACATCCAGGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPIVKLP*NIQDVF
Trigger: AAAAACATCCTGGATGTTGCACGGCAGCTTAACGAT...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCATCGTTAAGCTGCCGTaGAACATCCAGGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVIVKLP*NIQDVF
Trigger: AAAAACATCCTGGATGTTGCACGGCAGCTTAACGAT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTC +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEPLQPH*RYQTWL
Trigger: GAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGG...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000652429.1
CDS-3UTR GCA 90 bp TCCAGGGCATGTTCAAGCTCCTTGGTAAACAGGCTTTTCTCTCCAATCTTAGAGCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTC +
Preference number: 4 (lower is better)
Translates to: SRACSSSLVNRLFSPILEPLQPH*RYQTWL
Trigger: GAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGG...CTCTAAGATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR GCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGTTTTCTTCCGCCGTTaGAGCCGCATTGCCGTTACC +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEVFFRR*SRIAVT
Trigger: GGTAACGGCAATGCGGCTGCAACGGCGGAAGAAAAC...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000442944.7
ENST00000544387.5
ENST00000652429.1
CDS-3UTR GCA 90 bp TGTTCAAGCTCCTTGGTAAACAGGCTTTTCTCTCCAATCTTCAGAACTGGGAGCCAGAAGCCCAAAGTGTaGTGGTCACCGGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: CSSSLVNRLFSPIFRTGSQKPKV*WSPAQH
Trigger: GTGCTGAGCCGGTGACCAGCACACTTTGGGCTTCTG...GCTCCCAGTTCTGAAGATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCTAAGACGTTTGTGTaGAGTTCGGAGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQSKTFV*SSEAWL
Trigger: CAGCCAAGCCTCCGAACTGCACACAAACGTCTTAGA...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR GCA 90 bp CTGGCCCACAGCATACATGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTATGCATTCCTCAGGGTaGAGGATTACATGCCAGACA +
Preference number: 4 (lower is better)
Translates to: LAHSIHAFLRVQDYMPDTMHSSG*RITCQT
Trigger: TGTCTGGCATGTAATCCTGCACCCTGAGGAATGCAT...AGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR CCA 90 bp CCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTACGAGCAGTGATGCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: PKFWAANWGPRGMLRAVMLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...CATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEELFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGTGTATGCACGGCTACTaGCACACTGCAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEECMHGY*HTAASF
Trigger: GAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACA...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGATGCCTACCAACTGTaGGTCATCCTCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEDAYQL*VILRAI
Trigger: GATGGCCCTGAGGATGACCCACAGTTGGTAGGCATC...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGTTCTGGGCAGCCAACTaGGGCCCTCGTGGAATGTTA +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEFWAAN*GPRGML
Trigger: TAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAA...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGCATCCAGGATGTTTTTaGCTCCTTTGCTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEHPGCF*LLCSAT
Trigger: TGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATG...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCTCAGGGCATCCAGGATGTTTTTaGCTCCTTTGCTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: PRGMLRAVMPTNCGSSSGHPGCF*LLCSAT
Trigger: TGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATG...CCCTGAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTCATCCAGGATGTTTTTaGCTCCTTTGCTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSHPGCF*LLCSAT
Trigger: TGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATG...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp ACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTTGGTAAACAGGTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: TRSTSFFSRACSSSLVNRCRYQT*LRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCA...CCTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CCA 90 bp AAAGACAACAGCATCATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAATGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: KDNSIMRVFPLADGSDGECRYQT*LRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCA...TTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR CCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCACCTATGAATCAAAAGTaGAACGTGTCTTCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPPMNQK*NVSSQR
Trigger: CCTTTGGGAAGACACGTTCCACTTTTGATTCATAGG...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR TCA 90 bp TACAATAGGGTTACATCAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: YNRVTSILLNSRCGNFLCRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...GCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAACCCTATTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR TCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AAAGACAACAGCATCATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KDNSIMRVFPLADGSDGEKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...TTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR TCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAGAATGTTACGAGCAGTaGTGCCTACCAACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSECYEQ*CLPTVG
Trigger: ACCCACAGTTGGTAGGCATCACTGCTCGTAACATTC...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AGCATCATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGAAGACAGATGGTCCTTaGCTTACAATAGGGTTACAT +
Preference number: 4 (lower is better)
Translates to: SIMRVFPLADGSDGEARRKTDGP*LTIGLH
Trigger: ATGTAACCCTATTGTAAGTCAAGGACCATCTGTCTT...CCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCATGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR GCA 90 bp TTAATGGGCATCGTTAAGCTGCCGTGCAACATCCAGGATGTTTTTGGCTCCTTTCACTGTCCGTCTGTATaGGAGCAAGCTGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LMGIVKLPCNIQDVFGSFHCPSV*EQAGSC
Trigger: GCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTG...AAAGGAGCCAAAAACATCCTGGATGTTGCACGGCAGCTTAACGATGCCCATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGCGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEERGFQC*HHTVRL
Trigger: CAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCG...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEELLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GAGAGTGCAGTATCAAGAATCTTGTCCCCTGTGGTGGACATAGCAACTTCAGAACTGCAGGCCAGCTGTTaGCAGGATGATGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: ESAVSRILSPVVDIATSELQASC*QDDGTE
Trigger: TTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAG...TTCTGAAGTTGCTATGTCCACCACAGGGGACAAGATTCTTGATACTGCACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR GCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDCQPMR*RPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCA...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CATACATGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HTCIPQGAGLHARHCSKSGPQHT*IPQGAG
Trigger: TCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCC...ACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCATGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR GCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGATCGTTAAGCTGCCGTaGAACATCCAGGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEIVKLP*NIQDVF
Trigger: AAAAACATCCTGGATGTTGCACGGCAGCTTAACGAT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTATCGTTAAGCTGCCGTaGAACATCCAGGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITIVKLP*NIQDVF
Trigger: AAAAACATCCTGGATGTTGCACGGCAGCTTAACGAT...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTATCGTTAAGCTGCCGTaGAACATCCAGGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSIVKLP*NIQDVF
Trigger: AAAAACATCCTGGATGTTGCACGGCAGCTTAACGAT...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTATCGTTAAGCTGCCGTaGAACATCCAGGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSIVKLP*NIQDVF
Trigger: AAAAACATCCTGGATGTTGCACGGCAGCTTAACGAT...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCACAACCCAGGCATCTGTaGCCCACAAACCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSQPRHL*PTNQLM
Trigger: CATTAACTGGTTTGTGGGGCACAGATGCCTGGGTTG...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAACATTCAAAGGCTGTTaGTTGGACTTCTCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPTFKGC*LDFSKE
Trigger: CTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGT...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCACATTCAAAGGCTGTTaGTTGGACTTCTCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVTFKGC*LDFSKE
Trigger: CTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGTCCCTGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEESLISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGGGA...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000442944.7
ENST00000650101.1
CDS-3UTR GCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACCCTGGGGCCAATCGCTaGACGGCTCGTCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDPGANR*TARPEA
Trigger: GGCTTCTGGACGAGCCGTGCAGCGATTGGCCCCAGG...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542729.5
CDS-3UTR GCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGGCCTCCACCAGCTCTaGAGTTTGTCTGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEGLHQL*SLSVHK
Trigger: CTTGTGCACAGACAAACTGCAGAGCTGGTGGAGGCC...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR CCA 90 bp TGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTACTTTCCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: CIPQGAGLHARHCSKSTFQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...GAAAGTACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR CCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAACTGTGGGTCATCCTCAGGGCCATCTTCATGCTGGGCAGGGACATGGATGGTCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: QLWVILRAIFMLGRDMDGLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...ACCATCCATGTCCCTGCCCAGCATGAAGATGGCCCTGAGGATGACCCACAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp TGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTACTTTCCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: CIPQGAGLHARHCSKSTFLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...GAAAGTACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR CCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGGGCCATCTTCATGCTaGGCAGGGACATGGATGGTA +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEGPSSC*AGTWMV
Trigger: TACCATCCATGTCCCTGCCCAGCATGAAGATGGCCC...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGTTCTGGGCAGCCAACTaGGGCCCTCGTGGAATGTTA +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEFWAAN*GPRGML
Trigger: TAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAA...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATCATCCAGGATGTTTTTaGCTCCTTTGCTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENHPGCF*LLCSAT
Trigger: TGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATG...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATAATCACTCTCATCTTTaGGCTGTTTTCTTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENNHSHL*AVFFRR
Trigger: ACGGCGGAAGAAAACAGCCCAAAGATGAGAGTGATT...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000442944.7
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GGTTACATCAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCAGCTGGGCGTGTTAGAGGTGGGGTaGTCAAGAAGTGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: GYINTPELQMRELSLQLGVLEVG*SRSEDR
Trigger: TCTGTCTTCACTTCTTGACCACCCCACCTCTAACAC...GCCCAGCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR CCA 90 bp GATCTTTCCCCAACCAATGGCGCAAAGCATGGGACCACCTCTATCTACTTGCTCGCATATGTCACCATGTaGCTTCCCTGGTCAAGTGTA +
Preference number: 4 (lower is better)
Translates to: DLSPTNGAKHGTTSIYLLAYVTM*LPWSSV
Trigger: TACACTTGACCAGGGAAGCCACATGGTGACATATGC...GAGCAAGTAGATAGAGGTGGTCCCATGCTTTGCGCCATTGGTTGGGGAAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CCA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGGTAGACGAACGTTCTTaGTCTGGGTCACTAAATCTA +
Preference number: 4 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEVDERS*SGSLNL
Trigger: TAGATTTAGTGACCCAGACCAAGAACGTTCGTCTAC...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR TCA 90 bp AACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTTGGTAAACAGAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: NQVHFILLQGMFKLLGKQKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...CTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGAATGTTACGAGCAGTaGTGCCTACCAACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEECYEQ*CLPTVG
Trigger: ACCCACAGTTGGTAGGCATCACTGCTCGTAACATTC...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CACAGTGGGCAGGTCCTTCAAGGAGTGAACAACCAGGTCCACTTCATTCTTCTCTTCCAGAAAACTCACTaGTTTCAAACTGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HSGQVLQGVNNQVHFILLFQKTH*FQTAGQ
Trigger: CTGGCCTGCAGTTTGAAATCAGTGAGTTTTCTGGAA...GAGAAGAATGAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCTGCCCACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR TCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGTCCAGGGCTCTGGAATaGCTGCAAGAGCAAAGATCC +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTESRALE*LQEQRS
Trigger: GGATCTTTGCTCTTGCAGTCATTCCAGAGCCCTGGA...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR TCA 90 bp GCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTACTTTCCATCCCCAAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: AFLRVQDYMPDTALKVLSIPKYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTTGGGGAT...GGAAAGTACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR GCA 90 bp GAGAGTGCAGTATCAAGAATCTTGTCCCCTGTGGTGGACATAGCAACTTCAGAACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: ESAVSRILSPVVDIATSERGFQC*HHTVRL
Trigger: CAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCG...TTCTGAAGTTGCTATGTCCACCACAGGGGACAAGATTCTTGATACTGCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR GCA 90 bp ATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGAAGCACTCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: MRVFPLADGSDGEARRKHSNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...GTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR GCA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCATCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPSNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GTGGACATAGCAACTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGCTCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: VDIATSELGAAQKESRGSSNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...GCTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAGTTGCTATGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR GCA 90 bp CATACATGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HTCIPQGAGLHARHCSKSLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...ACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCATGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR GCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTGGTTGTGCCAGCCCATaGGCTGCAGGCCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLGCASP*AAGQLL
Trigger: CAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACC...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCGGCTACTGGCACACTaGAGCCTCCTTCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLRLLAH*SLLPGA
Trigger: GGCACCTGGAAGGAGGCTGCAGTGTGCCAGTAGCCG...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392841.1
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTACATTCAAAGGCTGTTaGTTGGACTTCTCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSTFKGC*LDFSKE
Trigger: CTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGT...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACACATTCAAAGGCTGTTaGTTGGACTTCTCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHTFKGC*LDFSKE
Trigger: CTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGT...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CTCCAGGGCATGTTCAAGCTCCTTGGTAAACAGGCTTTTCTCTCCAATCTTAGACCACCTCTATCTACTTaGTCCCCAGCGCCTTTTGGA +
Preference number: 4 (lower is better)
Translates to: LQGMFKLLGKQAFLSNLRPPLST*SPAPFG
Trigger: TCCAAAAGGCGCTGGGGAGCAAGTAGATAGAGGTGG...TCTAAGATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCCCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR GCA 90 bp TACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTGCAGCCTATGCATTCCTCAGGGTaGAGGATAATAGGGTTACAT +
Preference number: 4 (lower is better)
Translates to: YSCPSFIAVCTATGTLQPMHSSG*RIIGLH
Trigger: ATGTAACCCTATTATCCTGCACCCTGAGGAATGCAT...AGGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648026.1
CDS-3UTR CCA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGGAGGAAGCACAGTGGGCAGGTCCTTCAAGGAGTGAACAACCAGGTCCACTTCCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: RRKHSGQVLQGVNNQVHFLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...GAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CCA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TACAATAGGGTTACATCAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: YNRVTSILLNSRCGNFLCLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...GCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAACCCTATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR CCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGCAACTGGGGCCCTCGTaGAATGTTACGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEQLGPS*NVTSSD
Trigger: ATCACTGCTCGTAACATTCCACGAGGGCCCCAGTTG...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCTGATGCCCAAGTTCTaGGCAGCCAACTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKLMPKF*AANWGP
Trigger: AGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAG...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TCCAGGGCATGTTCAAGCTCCTTGGTAAACAGGCTTTTCTCTCCAATCTTAGAGAGACATGGCTCCGCTTaGAAAGTAGGCTGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SRACSSSLVNRLFSPILERHGSA*KVGCVW
Trigger: CCACACACAGCCTACTTTCCAAGCGGAGCCATGTCT...CTCTAAGATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR CCA 90 bp TGTTCAAGCTCCTTGGTAAACAGGCTTTTCTCTCCAATCTTCAGAACTGGGAGCTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: CSSSLVNRLFSPIFRTGSCRYQT*LRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCA...GCTCCCAGTTCTGAAGATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR CCA 90 bp GATCTTTCCCCAACCAATGGCGCAAAGCATGGGACCACCTCTATCTACTTGCTCAATCACTCTCATCTTTaGGCTGTTTTCTTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: DLSPTNGAKHGTTSIYLLNHSHL*AVFFRR
Trigger: ACGGCGGAAGAAAACAGCCCAAAGATGAGAGTGATT...GAGCAAGTAGATAGAGGTGGTCCCATGCTTTGCGCCATTGGTTGGGGAAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CCA 90 bp GCTGCCGTGCAACATCCAGGATGTTTTTGGCTCCTTTGCTCAGCAACAAGTTGGAATCACTCTCATCTTTaGGCTGTTTTCTTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: AAVQHPGCFWLLCSATSWNHSHL*AVFFRR
Trigger: ACGGCGGAAGAAAACAGCCCAAAGATGAGAGTGATT...CCAACTTGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATGTTGCACGGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp TTCTCTCCAATCTTAGAGAGTGCAGTATCAAGAATCTTGTCCCCTGTGGTGGACTCTTTCCCCAACCAATaGCGCAAAGCATGGGACCAC +
Preference number: 4 (lower is better)
Translates to: FSPILESAVSRILSPVVDSFPNQ*RKAWDH
Trigger: GTGGTCCCATGCTTTGCGCCATTGGTTGGGGAAAGA...GTCCACCACAGGGGACAAGATTCTTGATACTGCACTCTCTAAGATTGGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR TCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGAAGACAACAGCATCATaGGGGTTTTCCCGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEKTTAS*GFSRLQ
Trigger: CTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTT...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR TCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGGAAGCCCCCACATACTaGGGAGGCAAGGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKEAPTY*GGKAVI
Trigger: GATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTC...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR TCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTGGTCGTCCTACAGTCTaGCTCCTGGTCTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSGRPTV*LLVSAE
Trigger: CTCTGCGGAGACCAGGAGTCAGACTGTAGGACGACC...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542729.5
ENST00000652429.1
CDS-3UTR GCA 90 bp ATACATGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: IHAFLRVQDYMPDTALKVRGFQC*HHTVRL
Trigger: CAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCG...TACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR GCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGCAATGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEAMISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCATTGC...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AGCATACATGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGCAATGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: SIHAFLRVQDYMPDTALKAMISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCATTGC...TTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCATGTATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR GCA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSSNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCATCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSSNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTCTCTGCAGCTGGGCTaGTCTTCGCAGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDSLQLG*SSQGAG
Trigger: ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGA...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ATTCTTCTCCAGGGCATGTTCAAGCTCCTTGGTAAACAGGCTTTTCTCTCCAATCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ILLQGMFKLLGKQAFLSNLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...ATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR GCA 90 bp AGACAAGCTTCTTGGTTGAGAACAAAGGGAAGGCATATGTCACCATGTGGCTTCTCACTGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: RQASWLRTKGRHMSPCGFSLISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGTGA...GAAGCCACATGGTGACATATGCCTTCCCTTTGTTCTCAACCAAGAAGCTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR GCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAGCACTCACCGCCGTTaGAGCCGCATTGCCGTTACC +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSSTHRR*SRIAVT
Trigger: GGTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCT...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542729.5
CDS-3UTR CCA 90 bp CTTTTCTCTCCAATCTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: LFSPIFRTGSSPEGISGQLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...CTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAGATTGGAGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR CCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTACGCCCAAGGCCCCCTaGCCCACAGCATACATGCAT +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLTPKAP*PTAYMH
Trigger: ATGCATGTATGCTGTGGGCCAGGGGGCCTTGGGCGT...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392841.1
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGTGCTGGGCAGGGACATaGATGGTAGCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKCWAGT*MVACMV
Trigger: GACCATGCAGGCTACCATCCATGTCCCTGCCCAGCA...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACCTGATGCCCAAGTTCTaGGCAGCCAACTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDLMPKF*AANWGP
Trigger: AGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAG...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACCTACAGTCTGACTCCTaGTCTCCGCAGAGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDLQSDS*SPQSLA
Trigger: CGCGAGGCTCTGCGGAGACCAGGAGTCAGACTGTAG...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542729.5
ENST00000652429.1
CDS-3UTR CCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTACAGTCTGACTCCTaGTCTCCGCAGAGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLLQSDS*SPQSLA
Trigger: CGCGAGGCTCTGCGGAGACCAGGAGTCAGACTGTAG...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542729.5
ENST00000652429.1
CDS-3UTR TCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDRWLRW*SQEEAQ
Trigger: CTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCT...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTTCCGAAGCCGGGTGTTaGGGTTTCCCCGAATACTCC +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLSEAGC*GFPEYS
Trigger: GGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGA...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR TCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTTCCGAAGCCGGGTGTTaGGGTTTCCCCGAATACTCC +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSSEAGC*GFPEYS
Trigger: GGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGA...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR TCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTATCAAGGCCCCAAGGTaGGGCAAATCCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSIKAPR*GKSLEG
Trigger: GCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGAT...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTATCAAGGCCCCAAGGTaGGGCAAATCCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLIKAPR*GKSLEG
Trigger: GCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGAT...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR TCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGACTTCTCTAAAGAGATaGAGCCCCCACATACTGAGG +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTETSLKR*SPHILR
Trigger: CCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGT...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGATTACATGCCAGACACTGCTCTAAAAGTACTTTCCATATGTCAGCTCATTTCAGTAGGACCTGCTGTTaGTGCCGCTGCAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: GLHARHCSKSTFHMSAHFSRTCC*CRCSNQ
Trigger: CTGGTTACTGCAGCGGCAGCAACAGCAGGTCCTACT...GAAATGAGCTGACATATGGAAAGTACTTTTAGAGCAGTGTCTGGCATGTAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR GCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTGAGCAAGCTGGCTCTTaGGGGTACCCACGCGAATCA +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSEQAGS*GYPRES
Trigger: TGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACGAGCAAGCTGGCTCTTaGGGGTACCCACGCGAATCA +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDEQAGS*GYPRES
Trigger: TGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCTGCAGGCCAGCTGTTaGCAGGATGATGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKLQASC*QDDGTE
Trigger: TTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAG...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACCAGCCTCCTTCCAGGTaGCTCAGGAAGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDQPPSR*LRKALS
Trigger: TGAAAGGGCCTTCCTGAGGCACCTGGAAGGAGGCTG...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392841.1
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGTGTTTTTGGCTCCTTTaGTCAGCAACAAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEECFWLL*SATSWP
Trigger: TGGCCAACTTGTTGCTGAGCAAAGGAGCCAAAAACA...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSGRLEP*SSVSRG
Trigger: ACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCC...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTGGAAGGCTTGAACCCTaGAGTTCAGTCTCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLGRLEP*SSVSRG
Trigger: ACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCC...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GATCTTTCCCCAACCAATGGCGCAAAGCATGGGACCACCTCTATCTACTTGCTCCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: DLSPTNGAKHGTTSIYLLLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...GAGCAAGTAGATAGAGGTGGTCCCATGCTTTGCGCCATTGGTTGGGGAAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGGGGCCATCTTCATGCTaGGCAGGGACATGGATGGTA +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKGPSSC*AGTWMV
Trigger: TACCATCCATGTCCCTGCCCAGCATGAAGATGGCCC...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGCATCCAGGATGTTTTTaGCTCCTTTGCTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEHPGCF*LLCSAT
Trigger: TGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATG...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GGTTACATCAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCAGCTGGGCAGAAGTGAAGACAGATaGTCCTTGACTTACAATAGG +
Preference number: 4 (lower is better)
Translates to: GYINTPELQMRELSLQLGRSEDR*SLTYNR
Trigger: CCTATTGTAAGTCAAGGACCATCTGTCTTCACTTCT...GCCCAGCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649868.1
3UTR CAA 72 bp TCTCTGGCAGGGTTTCTAGGGTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCATCATGAGGGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SLAGFLGSSQQI*GERQQHHEGFP
Trigger: GGGAAAACCCTCATGATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGACCCTAGAAACCCTGCCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
3UTR CAA 72 bp AAGCAGATGCAGAAGGTTGTGAGACAAGCTTCTTGGTaGAGAACAAAGGGAAGGCATATGTCACCATGTGGC +
Preference number: 4 (lower is better)
Translates to: KQMQKVVRQASW*RTKGRHMSPCG
Trigger: GCCACATGGTGACATATGCCTTCCCTTTGTTCTCAACCAAGAAGCTTGTCTCACAACCTTCTGCATCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR TCA 90 bp TTAATGGGCATCGTTAAGCTGCCGTGCAACATCCAGGATGTTTTTGGCTCCTTTTTACATCAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: LMGIVKLPCNIQDVFGSFLHQYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAA...AAAGGAGCCAAAAACATCCTGGATGTTGCACGGCAGCTTAACGATGCCCATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTAGTAGGACCTGCTGTTaGTGCCGCTGCAGTAACCAG +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLSRTCC*CRCSNQ
Trigger: CTGGTTACTGCAGCGGCAGCAACAGCAGGTCCTACT...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392841.1
CDS-3UTR GCA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQSNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCTCCTGAACTCCAGATaGGGGAACTTTCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKLLNSR*GNFLCS
Trigger: GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAG...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTCTGCAGGCCAGCTGTTaGCAGGATGATGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSLQASC*QDDGTE
Trigger: TTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAG...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSGPQHT*IPQGAG
Trigger: TCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCC...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCAGGAGGAAGCACAGTaGGCAGGTCCTTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLQEEAQ*AGPSRS
Trigger: ACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCACTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTCTCTTCGCAGGGAGCTaGTTCCCACCACACTCTTCT +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSLFAGS*FPPHSS
Trigger: AGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAG...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACGATGCCTACCAACTGTaGGTCATCCTCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDDAYQL*VILRAI
Trigger: GATGGCCCTGAGGATGACCCACAGTTGGTAGGCATC...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTTTCTGGGCAGCCAACTaGGGCCCTCGTGGAATGTTA +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSFWAAN*GPRGML
Trigger: TAACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAA...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGAATCACTCTCATCTTTaGGCTGTTTTCTTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTENHSHL*AVFFRR
Trigger: ACGGCGGAAGAAAACAGCCCAAAGATGAGAGTGATT...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000442944.7
ENST00000544387.5
ENST00000652429.1
CDS-3UTR CCA 90 bp TTAATGGGCATCGTTAAGCTGCCGTGCAACATCCAGGATGTTTTTGGCTCCTTTAATCACTCTCATCTTTaGGCTGTTTTCTTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: LMGIVKLPCNIQDVFGSFNHSHL*AVFFRR
Trigger: ACGGCGGAAGAAAACAGCCCAAAGATGAGAGTGATT...AAAGGAGCCAAAAACATCCTGGATGTTGCACGGCAGCTTAACGATGCCCATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACAAGCCCAAAGTGTGCTaGTCACCGGCTCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDKPKVC*SPAQHS
Trigger: TGAGTGCTGAGCCGGTGACCAGCACACTTTGGGCTT...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542729.5
CDS-3UTR TCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGAGGTCCTTCAAGGAGTaGACAACCAGGTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKRSFKE*TTRSTS
Trigger: TGAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCT...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR TCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTTTCCCCGAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLFPEYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAA...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR TCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTTTCCCCGAATACTCCTaGACTCCAGATGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSFPEYS*TPDAGT
Trigger: AGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAA...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTCGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTG +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSRGFQC*HHTVRL
Trigger: CAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCG...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGGCAATGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKAMISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCATTGC...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TCTAGACTCCAGACTCCTCCAGTCAGGTACAGTTGCCCATCCTTCATAGCTGTATCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: SRLQTPPVRYSCPSFIAVSNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...TACAGCTATGAAGGATGGGCAACTGTACCTGACTGGAGGAGTCTGGAGTCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR GCA 90 bp AAAGACAACAGCATCATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAATCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: KDNSIMRVFPLADGSDGESNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...TTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR GCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGTCCTTCATAGCTGTATaGACGGCTACTGGCACACTG +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKSFIAV*TATGTL
Trigger: CAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGA...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGATCGTTAAGCTGCCGTaGAACATCCAGGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEIVKLP*NIQDVF
Trigger: AAAAACATCCTGGATGTTGCACGGCAGCTTAACGAT...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTTGGGCATCGTTAAGCTaGCGTGCAACATCCAGGATG +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLWASLS*RATSRM
Trigger: CATCCTGGATGTTGCACGGCAGCTTAACGATGCCCA...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCAACCCAGGCATCTGTaGCCCACAAACCAGTTAATG +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKQPRHL*PTNQLM
Trigger: CATTAACTGGTTTGTGGGGCACAGATGCCTGGGTTG...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCC +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSRSKMS*SLARTS
Trigger: GGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCT...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392841.1
ENST00000648374.1
ENST00000652429.1
3UTR CAA 72 bp TCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCTCCAATCTTAGAGAGT +
Preference number: 4 (lower is better)
Translates to: STSFFSRACSSS*VNRLFSPILES
Trigger: ACTCTCTAAGATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
3UTR CAA 72 bp TCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCTCCAATCTTCAGAACT +
Preference number: 4 (lower is better)
Translates to: STSFFSRACSSS*VNRLFSPIFRT
Trigger: AGTTCTGAAGATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR TCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACAGGTCCTTCAAGGAGTaGACAACCAGGTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDRSFKE*TTRSTS
Trigger: TGAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCT...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTGCAATGATTTCAAACTaGAGGCCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLAMISN*RPGYEA
Trigger: AGCCTCGTACCCTGGCCTGCAGTTTGAAATCATTGC...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGTCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEESNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTCCTTCATAGCTGTATaGACGGCTACTGGCACACTG +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDSFIAV*TATGTL
Trigger: CAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGA...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTTCCTTCATAGCTGTATaGACGGCTACTGGCACACTG +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLSFIAV*TATGTL
Trigger: CAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGA...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGACATTCAAAGGCTGTTaGTTGGACTTCTCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTETFKGC*LDFSKE
Trigger: CTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGT...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTACTTTCCTTACATGCCAGACACTaGTCTAAAAGTACTTTCCAT +
Preference number: 4 (lower is better)
Translates to: AFLRVQDYMPDTALKVLSLHARH*SKSTFH
Trigger: ATGGAAAGTACTTTTAGAGCAGTGTCTGGCATGTAA...GGAAAGTACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR CCA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTELPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CATACATGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: HTCIPQGAGLHARHCSKSLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...ACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCATGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR CCA 90 bp TACAATAGGGTTACATCAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: YNRVTSILLNSRCGNFLCLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...GCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAACCCTATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR CCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCATCCAGGATGTTTTTaGCTCCTTTGCTCAGCAACA +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKHPGCF*LLCSAT
Trigger: TGTTGCTGAGCAAAGGAGCCAAAAACATCCTGGATG...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTACATGGATGGTAGCCTaGATGGTCTCTTGTATGCTA +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLTWMVA*MVSCML
Trigger: TAGCATACAAGAGACCATGCAGGCTACCATCCATGT...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGATCGTTAAGCTGCCGTaGAACATCCAGGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKIVKLP*NIQDVF
Trigger: AAAAACATCCTGGATGTTGCACGGCAGCTTAACGAT...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACATCGTTAAGCTGCCGTaGAACATCCAGGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDIVKLP*NIQDVF
Trigger: AAAAACATCCTGGATGTTGCACGGCAGCTTAACGAT...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGACATTCAAAGGCTGTTaGTTGGACTTCTCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKTFKGC*LDFSKE
Trigger: CTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGT...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAATCACTCTCATCTTTaGGCTGTTTTCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSNHSHL*AVFFLQ
Trigger: CTGCAGGAAGAAAACAGCCCAAAGATGAGAGTGATT...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648374.1
3UTR CAA 72 bp TTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTaGGACTTCTCTAAAGAGATGAAGCCCCCACATACT +
Preference number: 4 (lower is better)
Translates to: LLVGLVTFKGCC*DFSKEMKPPHT
Trigger: AGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp GGATTACATGCCAGACACTGCTCTAAAAGTACTTTCCATATGTCAGCTCATTTCTCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: GLHARHCSKSTFHMSAHFSNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...GAAATGAGCTGACATATGGAAAGTACTTTTAGAGCAGTGTCTGGCATGTAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR GCA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGTCCAATCTTAGAGAGTaGAGTATCAAGAATCTTGTC +
Preference number: 4 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKSNLRE*SIKNLV
Trigger: GACAAGATTCTTGATACTGCACTCTCTAAGATTGGA...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR GCA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACACATTCAAAGGCTGTTaGTTGGACTTCTCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDTFKGC*LDFSKE
Trigger: CTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGT...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CCA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTTCCCAACAAATTTTaGGTGAAAGACAACAGCATC +
Preference number: 4 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLLPNKF*VKDNSI
Trigger: GATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAG...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS TCA 90 bp CGGCGAGTACCGGGGACACGTGGGACCCGAGGTCGTCCTACAGTCTaGCTCCTGGTCTCCGCAGAGCCTCGCGTCACTTCCGGCGCCCTC +
Preference number: 5 (lower is better)
Translates to: RRVPGTRGTRGRPTV*LLVSAEPRVTSGAL
Trigger: GAGGGCGCCGGAAGTGACGCGAGGCTCTGCGGAGACCAGGAGTCAGACTGTAGGACGACCTCGGGTCCCACGTGTCCCCGGTACTCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536185.5
CDS GCA 90 bp ACGCCCAAGGCCCCCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: TPKAPCPTRLCQPMR*RPAVARMMALNSCC
Trigger: GCAGCAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGGGGCCTTGGGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS-3UTR CAA 90 bp CCTACCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTGCAGGCCAGCTGTTGCCCGAGCAAGCTGGCTCTaGCGGGTACCCACGCGAATC +
Preference number: 5 (lower is better)
Translates to: PTCPTRLCQPMRCRPAVARASWL*RVPTRI
Trigger: GATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTCG...GGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS CCA 90 bp CTGGGGCCAATCGCTGCACGGCTCGTCCAGAAGCCCAAAGTGTGCTaGTCACCGGCTCAGCACTCACCGCCGTTGCAGCCGCATTGCCGT +
Preference number: 5 (lower is better)
Translates to: LGPIAARLVQKPKVC*SPAQHSPPLQPHCR
Trigger: ACGGCAATGCGGCTGCAACGGCGGTGAGTGCTGAGCCGGTGACCAGCACACTTTGGGCTTCTGGACGAGCCGTGCAGCGATTGGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS CCA 90 bp CGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCAAGGCCCCCTGCCCCACCCGGTTGT +
Preference number: 5 (lower is better)
Translates to: RDRAAHPPDPRCPGP*LALPRPRPPAPPGC
Trigger: ACAACCGGGTGGGGCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS GCA 90 bp AACCTGGGGCCAATCGCTGCACGGCTCGTCCAGAAGCCCAAAGTGTaGTGGTCACCGGCTCAGCACTCACCGCCGTTGCAGCCGCATTGC +
Preference number: 5 (lower is better)
Translates to: NLGPIAARLVQKPKV*WSPAQHSPPLQPHC
Trigger: GCAATGCGGCTGCAACGGCGGTGAGTGCTGAGCCGGTGACCAGCACACTTTGGGCTTCTGGACGAGCCGTGCAGCGATTGGCCCCAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS CCA 90 bp AGAGTCTCGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCCACGCCCAAGGCCCCCTGCCCCACC +
Preference number: 5 (lower is better)
Translates to: RVSGSCSTPTRSKMS*SLARTSTPKAPCPT
Trigger: GGTGGGGCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS-3UTR CAA 90 bp TCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCACCTGCCCCACCCGGTaGTGCCAGCCCATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: SCCSSSFRSRVLRFPRILTCPTR*CQPMRC
Trigger: GCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGT...GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
CDS CCA 90 bp CGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCAAGGCCCCCTGGCCCACAGCATACA +
Preference number: 5 (lower is better)
Translates to: RDRAAHPPDPRCPGP*LALPRPRPPGPQHT
Trigger: TGTATGCTGTGGGCCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000536813.6
ENST00000537841.5
ENST00000542044.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000650307.1
ENST00000652429.1
CDS CCA 90 bp AGAGTCTCGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCCACGCCCAAGGCCCCCTGGCCCACA +
Preference number: 5 (lower is better)
Translates to: RVSGSCSTPTRSKMS*SLARTSTPKAPWPT
Trigger: TGTGGGCCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000536813.6
ENST00000537841.5
ENST00000542044.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000650307.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATATCTGCCCCACCCGGTaGTGCCAGCCCATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDICPTR*CQPMRC
Trigger: GCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGAT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGGATGATGGCACTGAACTCCTGAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCC +
Preference number: 5 (lower is better)
Translates to: PAHALQASCCQDDGTELLKMSWS*ARTSTP
Trigger: GGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTT...CAGGAGTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS GCA 90 bp CACTGCAGCCTCCTTCCAGGTGCCTCAGGAAGGCCCTTTCAGCGATaGAGCGAAGCAGAGTCTCGGGATCGTGCAGCACACCCACCAGAT +
Preference number: 5 (lower is better)
Translates to: HCSLLPGASGRPFQR*SEAESRDRAAHPPD
Trigger: ATCTGGTGGGTGTGCTGCACGATCCCGAGACTCTGCTTCGCTGCATCGCTGAAAGGGCCTTCCTGAGGCACCTGGAAGGAGGCTGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542044.5
ENST00000543090.5
ENST00000543543.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
ENST00000652429.1
CDS GCA 90 bp GTGTGCTGGTCACCGGCTCAGCACTCACCGCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTCCGCTTGGAAAGTAGGCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VCWSPAQHSPPLQPH*RYQTWLRLESRLCV
Trigger: CACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCTGAGCCGGTGACCAGCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS GCA 90 bp TATCTCGGCCTGGCAGTGGCCTCCACCAGCTCTGCAGTTTGTCTGTaGACAAGCCCAGGGCTCGGCAAGCAGGCTCGTAATGGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: YLGLAVASTSSAVCL*TSPGLGKQARNGKA
Trigger: GGCCTTTCCATTACGAGCCTGCTTGCCGAGCCCTGGGCTTGTGCACAGACAAACTGCAGAGCTGGTGGAGGCCACTGCCAGGCCGAGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650101.1
ENST00000650307.1
CDS GCA 90 bp CCCATCTCTTTCTTATCTCGGCCTGGCAGTGGCCTCCACCAGCTCTaGAGTTTGTCTGTGCACAAGCCCAGGGCTCGGCAAGCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: PISFLSRPGSGLHQL*SLSVHKPRARQAGS
Trigger: CGAGCCTGCTTGCCGAGCCCTGGGCTTGTGCACAGACAAACTGCAGAGCTGGTGGAGGCCACTGCCAGGCCGAGATAAGAAAGAGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650101.1
ENST00000650307.1
CDS CCA 90 bp GCTCAGCACTCACCGCCGTTGCAGCCGCATTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGGCTGTGTGTGGGTGCCGCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: AQHSPPLQPHCRYQT*LRLESRLCVGAAKV
Trigger: GACCTTAGCGGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS-3UTR CAA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTATCTGCCCCACCCGGTaGTGCCAGCCCATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSICPTR*CQPMRC
Trigger: GCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGAT...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAGGAGGAAGCACAGTGGGCAGGTCCTTCAAGGAGTGAACAACCAGGTCCACTTATCTGCCCCACCCGGTaGTGCCAGCCCATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: QEEAQWAGPSRSEQPGPLICPTR*CQPMRC
Trigger: GCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGAT...AAGTGGACCTGGTTGTTCACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CAA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACATCTGCCCCACCCGGTaGTGCCAGCCCATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHICPTR*CQPMRC
Trigger: GCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGAT...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp TCTCTCCAATCTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGCGGGCAGCACTCACCGCCGTaGCAGCCGCATTGCCGTTAC +
Preference number: 5 (lower is better)
Translates to: SLQSSELGAAQKESRGSGQHSPP*QPHCRY
Trigger: GTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCTG...CCCGCTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAGATTGGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS GCA 90 bp AGGAAGGCCCTTTCAGCGATGCAGCGAAGCAGAGTCTCGGGATCGTaGAGCACACCCACCAGATCCAAGATGTCCTGGTCCTTGGCTCGC +
Preference number: 5 (lower is better)
Translates to: RKALSAMQRSRVSGS*STPTRSKMSWSLAR
Trigger: GCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCTGCTTCGCTGCATCGCTGAAAGGGCCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542044.5
ENST00000543090.5
ENST00000543543.5
ENST00000544182.1
ENST00000546226.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
ENST00000652429.1
CDS CCA 90 bp GTATGCGAGCAAGCGCCGTTGCAGCCGCATTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGGCTGTGTGTGGGTGCCGCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: VCEQAPLQPHCRYQT*LRLESRLCVGAAKV
Trigger: GACCTTAGCGGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGCTTGCTCGCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542044.5
ENST00000543090.5
CDS CCA 90 bp GGCTCTGGAATGACGCCGTTGCAGCCGCATTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGGCTGTGTGTGGGTGCCGCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: GSGMTPLQPHCRYQT*LRLESRLCVGAAKV
Trigger: GACCTTAGCGGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGTCATTCCAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536813.6
CDS-3UTR CAA 90 bp GGCCAGGCTGATGCCCAAGTTCTGGGCAGCCAACTGGGGCCCTCGTGGAATGTTTTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: GQADAQVLGSQLGPSWNVLLSNK*ARLMPK
Trigger: CTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAA...AACATTCCACGAGGGCCCCAGTTGGCTGCCCAGAACTTGGGCATCAGCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CAA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGTGCGAGCAAGCGCCGTaGCAGCCGCATTGCCGTTAC +
Preference number: 5 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGCEQAP*QPHCRY
Trigger: GTAACGGCAATGCGGCTGCAACGGCGCTTGCTCGCA...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS GCA 90 bp AGAAGCCCAAAGTGTGCTGGTCACCGGCTCAGCACTCACCGCCGTTaGAGCCGCATTGCCGTTACCAGACATGGCTCCGCTTGGAAAGTA +
Preference number: 5 (lower is better)
Translates to: RSPKCAGHRLSTHRR*SRIAVTRHGSAWKV
Trigger: TACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCTGAGCCGGTGACCAGCACACTTTGGGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS CCA 90 bp GGCTGTTTTCTTCCGCCGTTGCAGCCGCATTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGGCTGTGTGTGGGTGCCGCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: GCFLPPLQPHCRYQT*LRLESRLCVGAAKV
Trigger: GACCTTAGCGGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGAAGAAAACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000442944.7
ENST00000536185.5
ENST00000543821.5
ENST00000544387.5
ENST00000545621.5
ENST00000545901.5
ENST00000546302.6
ENST00000640813.1
ENST00000652429.1
CDS CCA 90 bp AGAGTCTCGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCCACGCCCAAGGCCCCAATAGGGTTA +
Preference number: 5 (lower is better)
Translates to: RVSGSCSTPTRSKMS*SLARTSTPKAPIGL
Trigger: TAACCCTATTGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640813.1
CDS-3UTR CAA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACCGAGCAAGCTGGCTCTaGCGGGTACCCACGCGAATC +
Preference number: 5 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHRASWL*RVPTRI
Trigger: GATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTCG...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCGAGCAAGCTGGCTCTaGCGGGTACCCACGCGAATC +
Preference number: 5 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITRASWL*RVPTRI
Trigger: GATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTCG...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGATCTGCCCCACCCGGTaGTGCCAGCCCATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQICPTR*CQPMRC
Trigger: GCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGAT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCC +
Preference number: 5 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVKMSWS*ARTSTP
Trigger: GGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTT...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCC +
Preference number: 5 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDKMSWS*ARTSTP
Trigger: GGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCC +
Preference number: 5 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGKMSWS*ARTSTP
Trigger: GGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTT...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GTGGACATAGCAACTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGCGCCGTTGCAGCCGCATaGCCGTTACCAGACATGGCT +
Preference number: 5 (lower is better)
Translates to: VDIATSELGAAQKESRGSAVAAA*PLPDMA
Trigger: AGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGC...GCTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAGTTGCTATGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR CAA 90 bp ATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGAAGCACGCCGTTGCAGCCGCATaGCCGTTACCAGACATGGCT +
Preference number: 5 (lower is better)
Translates to: MRVFPLADGSDGEARRKHAVAAA*PLPDMA
Trigger: AGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGC...GTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR CAA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCACAGCACTCACCGCCGTaGCAGCCGCATTGCCGTTAC +
Preference number: 5 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSQHSPP*QPHCRY
Trigger: GTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCTG...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR CAA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGGGGACTTGGAGCGTaGGCTGTGGCTGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHWGLGA*AVAGRP
Trigger: TGGTCTCCCAGCCACAGCCAACGCTCCAAGTCCCCA...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS TCA 90 bp TTCCCAAAGGGGCCGTATCTGCATCCGCCTCAGCCCAGCCTCGAATaGAAGGACCCCGTCTGTGTAGACGAACGTTCTTGGTCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: FPKGPYLHPPQPSLE*KDPVCVDERSWSGS
Trigger: TGACCCAGACCAAGAACGTTCGTCTACACAGACGGGGTCCTTTCATTCGAGGCTGGGCTGAGGCGGATGCAGATACGGCCCCTTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
CDS GCA 90 bp CTACTCCTAGTCCAGGGCTCTGGAATGACGCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTCCGCTTGGAAAGTAGGCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LLLVQGSGMTPLQPH*RYQTWLRLESRLCV
Trigger: CACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGTCATTCCAGAGCCCTGGACTAGGAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536813.6
CDS GCA 90 bp ACCATGTGGCTTCCCTGGTCAAGTGTACCTGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGATCTGTGGAGGCGGAACAGGGAGTC +
Preference number: 5 (lower is better)
Translates to: TMWLPWSSVPGPQHT*IPQGAGSVEAEQGV
Trigger: GACTCCCTGTTCCGCCTCCACAGATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAGGTACACTTGACCAGGGAAGCCACATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544182.1
CDS GCA 90 bp AATCTAGAGCCGTGCATCCCAGGCCTGATGGGAATCCCACCCAGATaGCCGCAGGGACCGGAGTTCCGTTCCAAACAATCCTTCCACTCT +
Preference number: 5 (lower is better)
Translates to: NLEPCIPGLMGIPPR*PQGPEFRSKQSFHS
Trigger: AGAGTGGAAGGATTGTTTGGAACGGAACTCCGGTCCCTGCGGGCATCTGGGTGGGATTCCCATCAGGCCTGGGATGCACGGCTCTAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650101.1
ENST00000650307.1
CDS CCA 90 bp TACCTGGCCCACAGCATACATGCATTCCTCAGGGTGCAGGATCTGTaGAGGCGGAACAGGGAGTCAAAAGGGTGGACACGGGGGTGTCTA +
Preference number: 5 (lower is better)
Translates to: YLAHSIHAFLRVQDL*RRNRESKGWTRGCL
Trigger: TAGACACCCCCGTGTCCACCCTTTTGACTCCCTGTTCCGCCTCCACAGATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544182.1
CDS-3UTR CAA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATCGAGCAAGCTGGCTCTaGCGGGTACCCACGCGAATC +
Preference number: 5 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENRASWL*RVPTRI
Trigger: GATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTCG...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GAGCAGCCCAGAAGGAATCTCGGGGCAGCGGGACGGGCTTTAGCTATAGGCAAATTCCGAAGCCGGGTGTaGAGGTTTCCCCGAATACTC +
Preference number: 5 (lower is better)
Translates to: EQPRRNLGAAGRALAIGKFRSRV*RFPRIL
Trigger: GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAA...TTTGCCTATAGCTAAAGCCCGTCCCGCTGCCCCGAGATTCCTTCTGGGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR CAA 90 bp CTCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTTTCCGAAGCCGGGTGTaGAGGTTTCCCCGAATACTC +
Preference number: 5 (lower is better)
Translates to: LLLLVQLPKPGVEVSPNTFRSRV*RFPRIL
Trigger: GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAA...AGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CAA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCC +
Preference number: 5 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHKMSWS*ARTSTP
Trigger: GGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTT...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCC +
Preference number: 5 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSKMSWS*ARTSTP
Trigger: GGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTT...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTGCCGTTGCAGCCGCATaGCCGTTACCAGACATGGCT +
Preference number: 5 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSAVAAA*PLPDMA
Trigger: AGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGC...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGGCCGTTGCAGCCGCATaGCCGTTACCAGACATGGCT +
Preference number: 5 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEAVAAA*PLPDMA
Trigger: AGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGC...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGCCGTTGCAGCCGCATaGCCGTTACCAGACATGGCT +
Preference number: 5 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITAVAAA*PLPDMA
Trigger: AGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGC...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGCCGTTGCAGCCGCATaGCCGTTACCAGACATGGCT +
Preference number: 5 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSAVAAA*PLPDMA
Trigger: AGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGC...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTTGGTAAACAGACCTGCCCCACCCGGTaGTGCCAGCCCATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: NQVHFILLQGMFKLLGKQTCPTR*CQPMRC
Trigger: GCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGT...CTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542822.5
CDS-3UTR CAA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATCACCAGCTCTGCAGTTaGTCTGTGCACAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDHQLCS*SVHKPR
Trigger: CCTGGGCTTGTGCACAGACAAACTGCAGAGCTGGTG...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS GCA 90 bp GTTGCCTCAGCACAGTCTGAGAGGGGACTACCTAGAAACCTGGGATaGACAGGAAGAAATGCCACAGTCCTCCTTTCCCTGGCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: VASAQSERGLPRNLG*TGRNATVLLSLASR
Trigger: GCGGGAAGCCAGGGAAAGGAGGACTGTGGCATTTCTTCCTGTGCATCCCAGGTTTCTAGGTAGTCCCCTCTCAGACTGTGCTGAGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539045.1
CDS GCA 90 bp TGTGTAGACGAACGTTCTTGGTCTGGGTCACTAAATCTAGAGCCGTaGATCCCAGGCCTGATGGGAATCCCACCCAGATGCCCGCAGGGA +
Preference number: 5 (lower is better)
Translates to: CVDERSWSGSLNLEP*IPGLMGIPPRCPQG
Trigger: TCCCTGCGGGCATCTGGGTGGGATTCCCATCAGGCCTGGGATGCACGGCTCTAGATTTAGTGACCCAGACCAAGAACGTTCGTCTACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
CDS-3UTR CAA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGCGAGCAAGCTGGCTCTaGCGGGTACCCACGCGAATC +
Preference number: 5 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQRASWL*RVPTRI
Trigger: GATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTCG...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCAGGAGGAAGCACAGTGGGACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: VFPLADGSDGEARRKHSGTRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...CCCACTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGCGGGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CAA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGTTCCGAAGCCGGGTGTaGAGGTTTCCCCGAATACTC +
Preference number: 5 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGFRSRV*RFPRIL
Trigger: GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAA...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCATTCCGAAGCCGGGTGTaGAGGTTTCCCCGAATACTC +
Preference number: 5 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPFRSRV*RFPRIL
Trigger: GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAA...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCC +
Preference number: 5 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENKMSWS*ARTSTP
Trigger: GGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTT...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVLLSNK*ARLMPK
Trigger: CTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCATTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPLLSNK*ARLMPK
Trigger: CTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAA...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPLLSNK*ARLMPK
Trigger: CTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAA...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGTTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGLLSNK*ARLMPK
Trigger: CTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAA...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGCCGTTGCAGCCGCATaGCCGTTACCAGACATGGCT +
Preference number: 5 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENAVAAA*PLPDMA
Trigger: AGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGC...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGCAGAGTCTCGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCGCAAAGCCAGAAATGTaGTGTTCTCTCCTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SRVSGSCSTPTRSKMSWSAKPEM*CSLLSG
Trigger: CCCCGAGAGGAGAGAACACAACATTTCTGGCTTTGC...GGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS GCA 90 bp GTCCCTGATTTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTGTATGCGAGCAAGCTGGCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: VPDFKLQARVRGFQC*HHTVRLYASKLALA
Trigger: CGCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442944.7
ENST00000650101.1
CDS GCA 90 bp CTCACTGATTTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTGTATGCGAGCAAGCGCCGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LTDFKLQARVRGFQC*HHTVRLYASKRRCS
Trigger: GCTGCAACGGCGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000542044.5
CDS-3UTR CAA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGTRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDTRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPTRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCTGTGGTGGACATAGCAACTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGTTCCGAAGCCGGGTGTaGAGGTTTCCCCGAATACTC +
Preference number: 5 (lower is better)
Translates to: PVVDIATSELGAAQKESRFRSRV*RFPRIL
Trigger: GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAA...CCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAGTTGCTATGTCCACCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR CAA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTTCCGAAGCCGGGTGTaGAGGTTTCCCCGAATACTC +
Preference number: 5 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSFRSRV*RFPRIL
Trigger: GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAA...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTTTCCGAAGCCGGGTGTaGAGGTTTCCCCGAATACTC +
Preference number: 5 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITFRSRV*RFPRIL
Trigger: GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAA...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGATCTGCCCCACCCGGTaGTGCCAGCCCATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEICPTR*CQPMRC
Trigger: GCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGAT...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCC +
Preference number: 5 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQKMSWS*ARTSTP
Trigger: GGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCATTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSLLSNK*ARLMPK
Trigger: CTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAA...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGCAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEQTWLR*ESRLCV
Trigger: CACACACAGCCTACTTTCCAAGCGGAGCCATGTCTG...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTCAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSQTWLR*ESRLCV
Trigger: CACACACAGCCTACTTTCCAAGCGGAGCCATGTCTG...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTCAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSQTWLR*ESRLCV
Trigger: CACACACAGCCTACTTTCCAAGCGGAGCCATGTCTG...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACCAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHQTWLR*ESRLCV
Trigger: CACACACAGCCTACTTTCCAAGCGGAGCCATGTCTG...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAGTGGGCAGGTCCTTCAAGGAGTGAACAACCAGGTCCACTTCATTCTTCTCCAGCCGTTGCAGCCGCATaGCCGTTACCAGACATGGCT +
Preference number: 5 (lower is better)
Translates to: QWAGPSRSEQPGPLHSSPAVAAA*PLPDMA
Trigger: AGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGC...TGGAGAAGAATGAAGTGGACCTGGTTGTTCACTCCTTGAAGGACCTGCCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CAA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTTGTTTTCTTCCGCCGTaGCAGCCGCATTGCCGTTAC +
Preference number: 5 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITCFLPP*QPHCRY
Trigger: GTAACGGCAATGCGGCTGCAACGGCGGAAGAAAACA...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000442944.7
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCTCAGGTGTTTTCTTCCGCCGTaGCAGCCGCATTGCCGTTAC +
Preference number: 5 (lower is better)
Translates to: PSWNVTSSDAYQLWVILRCFLPP*QPHCRY
Trigger: GTAACGGCAATGCGGCTGCAACGGCGGAAGAAAACA...CCTGAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CAA 90 bp GTGGACATAGCAACTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGCGCAAAGCCAGAAATGTaGTGTTCTCTCCTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: VDIATSELGAAQKESRGSAKPEM*CSLLSG
Trigger: CCCCGAGAGGAGAGAACACAACATTTCTGGCTTTGC...GCTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAGTTGCTATGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS TCA 90 bp GGTTTTCCCGCTTGCAAGACTCTTACTTGCAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAGTGGGCAGGTCCTTCAAGGAGTGAA +
Preference number: 5 (lower is better)
Translates to: GFPACKTLTCRWLRW*SQEEAQWAGPSRSE
Trigger: TTCACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGTAAGAGTCTTGCAAGCGGGAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543821.5
CDS GCA 90 bp AGCAATGATTTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTGTATGCGAGCAAGCGCCGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: SNDFKLQARVRGFQC*HHTVRLYASKRRCS
Trigger: GCTGCAACGGCGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAATCATTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534956.2
ENST00000543090.5
CDS GCA 90 bp CTCACTGATTTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTGTATGCGAGCAAGCTGGCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: LTDFKLQARVRGFQC*HHTVRLYASKLALA
Trigger: CGCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542822.5
ENST00000545621.5
ENST00000545901.5
CDS GCA 90 bp CACAATTCAGATCTTCCTACTCCTAGTCCAGGGCTCTGGAATGACTaGAAGAGCAAAGATCCCAGCCCTCACCAACAGGCTGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: HNSDLPTPSPGLWND*KSKDPSPHQQAGQG
Trigger: CCCCTGTCCAGCCTGTTGGTGAGGGCTGGGATCTTTGCTCTTGCAGTCATTCCAGAGCCCTGGACTAGGAGTAGGAAGATCTGAATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS CCA 90 bp CTATCTGAGCCGTCTAGACTCCAGACTCCTCCAGTCAGGTACAGCTaGGGAAGAAAACAGTTGCCTCAGCACAGTCTGAGAGGGGACTAC +
Preference number: 5 (lower is better)
Translates to: LSEPSRLQTPPVRYS*GRKQLPQHSLRGDY
Trigger: GTAGTCCCCTCTCAGACTGTGCTGAGGCAACTGTTTTCTTCCCCAGCTGTACCTGACTGGAGGAGTCTGGAGTCTAGACGGCTCAGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539045.1
CDS CCA 90 bp ATCTTTGGGCTGTTTTCTTCCAATAGACGACTGAGGATGGCAACCTaGGGCCAATCGCTGCACGGCTCGTCCAGAAGCCCAAAGTGTGCT +
Preference number: 5 (lower is better)
Translates to: IFGLFSSNRRLRMAT*GQSLHGSSRSPKCA
Trigger: AGCACACTTTGGGCTTCTGGACGAGCCGTGCAGCGATTGGCCCCAGGTTGCCATCCTCAGTCGTCTATTGGAAGAAAACAGCCCAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS CCA 90 bp CCAGAATCACTGGCTTGGAAGAAAGGAACTTCAGAACCTGGCCTGTaGCCAGCTGAGTCTCAGAGTGGGGAAATACTCCAAGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PESLAWKKGTSEPGL*PAESQSGEILQGWS
Trigger: GGACCAGCCTTGGAGTATTTCCCCACTCTGAGACTCAGCTGGCCACAGGCCAGGTTCTGAAGTTCCTTTCTTCCAAGCCAGTGATTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543543.5
CDS CCA 90 bp AGGGAAGGCATATGTCACCATGTGGCTTCCCTGGTCAAGTGTACCTaGCCCACAGCATACATGCATTCCTCAGGGTGCAGGATCTGTGGA +
Preference number: 5 (lower is better)
Translates to: REGICHHVASLVKCT*PTAYMHSSGCRICG
Trigger: TCCACAGATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAGGTACACTTGACCAGGGAAGCCACATGGTGACATATGCCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544182.1
CDS-3UTR CAA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSETRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSTRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CTTCAGAACTGGGAGCAGCCCAGAAGGAATCTCGGGGCAGCGGGACGGGCTTTAGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LQNWEQPRRNLGAAGRALACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...TAAAGCCCGTCCCGCTGCCCCGAGATTCCTTCTGGGCTGCTCCCAGTTCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CAA 90 bp CTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTCTTCTCTGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LCSWAALRRELVPTTLFSACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...AGAGAAGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR CAA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATTTCCGAAGCCGGGTGTaGAGGTTTCCCCGAATACTC +
Preference number: 5 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENFRSRV*RFPRIL
Trigger: GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAA...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCAAATCCCTGGAAGGCTaGAACCCTGCAGTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPKSLEG*NPAVQS
Trigger: AGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTT...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAAATCCCTGGAAGGCTaGAACCCTGCAGTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDKSLEG*NPAVQS
Trigger: AGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTT...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGAAATCCCTGGAAGGCTaGAACCCTGCAGTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGKSLEG*NPAVQS
Trigger: AGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTT...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAAAATCCCTGGAAGGCTaGAACCCTGCAGTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPKSLEG*NPAVQS
Trigger: AGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTT...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATCAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENQTWLR*ESRLCV
Trigger: CACACACAGCCTACTTTCCAAGCGGAGCCATGTCTG...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AAAGACAACAGCATCATGAGGGTTTTCCCGCTTGCAGATGGCTCCGATGGTGAAGCCGTTGCAGCCGCATaGCCGTTACCAGACATGGCT +
Preference number: 5 (lower is better)
Translates to: KDNSIMRVFPLADGSDGEAVAAA*PLPDMA
Trigger: AGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGC...TTCACCATCGGAGCCATCTGCAAGCGGGAAAACCCTCATGATGCTGTTGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR CAA 90 bp CCATCTTCATGCTGGGCAGGGACATGGATGGTAGCCTGCATGGTCTCTTGTATGTGTTTTCTTCCGCCGTaGCAGCCGCATTGCCGTTAC +
Preference number: 5 (lower is better)
Translates to: PSSCWAGTWMVACMVSCMCFLPP*QPHCRY
Trigger: GTAACGGCAATGCGGCTGCAACGGCGGAAGAAAACA...CATACAAGAGACCATGCAGGCTACCATCCATGTCCCTGCCCAGCATGAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CAA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCTGCCCCACCCGGTaGTGCCAGCCCATGCGCTGC +
Preference number: 5 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKPCPTR*CQPMRC
Trigger: GCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGG...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS-3UTR CAA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGTCACAGCTGGGGACTaGGAGCGTTGGCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEVTAGD*ERWLWL
Trigger: CAGCCACAGCCAACGCTCCAAGTCCCCAGCTGTGAC...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS TCA 90 bp AAGCCCCTTACTTGCAAGACTCTTACTTGCAGATGGCTCCGATGGTaGAGCCAGGAGGAAGCACAGTGGGCAGGTCCTTCAAGGAGTGAA +
Preference number: 5 (lower is better)
Translates to: KPLTCKTLTCRWLRW*SQEEAQWAGPSRSE
Trigger: TTCACTCCTTGAAGGACCTGCCCACTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGTAAGAGTCTTGCAAGTAAGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546226.5
CDS TCA 90 bp ACTGGCTTGGAAGAAAGGAACTTCAGAACCTGGCCTGTGGCCAGCTaGGTCTCAGAGTGGGGAAATACTCCAAGGCTGGTCCCTTTAACC +
Preference number: 5 (lower is better)
Translates to: TGLEERNFRTWPVAS*VSEWGNTPRLVPLT
Trigger: GGTTAAAGGGACCAGCCTTGGAGTATTTCCCCACTCTGAGACTCAGCTGGCCACAGGCCAGGTTCTGAAGTTCCTTTCTTCCAAGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543543.5
CDS GCA 90 bp AGCAATGATTTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTGTATGCGAGCAAGCTGGCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: SNDFKLQARVRGFQC*HHTVRLYASKLALA
Trigger: CGCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAATCATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000392841.1
ENST00000535253.5
ENST00000536813.6
ENST00000537841.5
ENST00000542345.5
ENST00000542729.5
ENST00000543543.5
ENST00000543821.5
ENST00000544360.5
ENST00000544387.5
ENST00000546226.5
ENST00000546302.6
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000648488.1
ENST00000649823.1
ENST00000652429.1
CDS GCA 90 bp CCAATTGATTTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTGTATGCGAGCAAGCTGGCTCTTGCG +
Preference number: 5 (lower is better)
Translates to: PIDFKLQARVRGFQC*HHTVRLYASKLALA
Trigger: CGCAAGAGCCAGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAATCAATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536185.5
CDS GCA 90 bp CTCACTGATTTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTGTATGCGAGCAAGCAACAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: LTDFKLQARVRGFQC*HHTVRLYASKQQAG
Trigger: TCCAGCCTGTTGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650307.1
CDS CCA 90 bp CCTCGAATGAAAGGACCCCGTCTGTGTAGACGAACGTTCTTGGTCTaGGTCACTAAATCTAGAGCCGTGCATCCCAGGCCTGATGGGAAT +
Preference number: 5 (lower is better)
Translates to: PRMKGPRLCRRTFLV*VTKSRAVHPRPDGN
Trigger: ATTCCCATCAGGCCTGGGATGCACGGCTCTAGATTTAGTGACCCAGACCAAGAACGTTCGTCTACACAGACGGGGTCCTTTCATTCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
CDS CCA 90 bp TGCAGTTCGGAGGCTTGGCTGATACTCTCTCCTATGAATCAAAAGTaGAACGTGTCTTCCCAAAGGGGCCGTATCTGCATCCGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: CSSEAWLILSPMNQK*NVSSQRGRICIRLS
Trigger: GCTGAGGCGGATGCAGATACGGCCCCTTTGGGAAGACACGTTCCACTTTTGATTCATAGGAGAGAGTATCAGCCAAGCCTCCGAACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
CDS-3UTR CAA 90 bp TACAGTTGCCCATCCTTCATAGCTGTATGCACGGCTACTGGCACACTGCAGCCTACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: YSCPSFIAVCTATGTLQPTRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...AGGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CAA 90 bp CTGGCCCACAGCATACATGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: LAHSIHAFLRVQDYMPDTTRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...AGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR CAA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCGCAGTATCAAGAATCTaGTCCCCTGTGGTGGACATA +
Preference number: 5 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVAVSRI*SPVVDI
Trigger: TATGTCCACCACAGGGGACAAGATTCTTGATACTGC...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCC +
Preference number: 5 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEKMSWS*ARTSTP
Trigger: GGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTT...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000543090.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCCAGTCAGGTACAGTaGCCCATCCTTCATAGCTGT +
Preference number: 5 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSSSQVQ*PILHSC
Trigger: ACAGCTATGAAGGATGGGCAACTGTACCTGACTGGA...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCTCAGGGTCCAGTCAGGTACAGTaGCCCATCCTTCATAGCTGT +
Preference number: 5 (lower is better)
Translates to: PRGMLRAVMPTNCGSSSGSSQVQ*PILHSC
Trigger: ACAGCTATGAAGGATGGGCAACTGTACCTGACTGGA...CCCTGAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CAA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTTCCAGTCAGGTACAGTaGCCCATCCTTCATAGCTGT +
Preference number: 5 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSSSQVQ*PILHSC
Trigger: ACAGCTATGAAGGATGGGCAACTGTACCTGACTGGA...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCAGTCAGGTACAGTaGCCCATCCTTCATAGCTGT +
Preference number: 5 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHSSQVQ*PILHSC
Trigger: ACAGCTATGAAGGATGGGCAACTGTACCTGACTGGA...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGCAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQQTWLR*ESRLCV
Trigger: CACACACAGCCTACTTTCCAAGCGGAGCCATGTCTG...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000652429.1
CDS-3UTR CAA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCCGTTGCAGCCGCATaGCCGTTACCAGACATGGCT +
Preference number: 5 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEAVAAA*PLPDMA
Trigger: AGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGC...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000652429.1
CDS-3UTR CAA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTGTTTTCTTCCGCCGTaGCAGCCGCATTGCCGTTAC +
Preference number: 5 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQCFLPP*QPHCRY
Trigger: GTAACGGCAATGCGGCTGCAACGGCGGAAGAAAACA...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000442944.7
ENST00000544387.5
ENST00000652429.1
CDS-3UTR CAA 90 bp CTGATCTTTCCCCAACCAATGGCGCAAAGCATGGGACCACCTCTATCTACTTGCTGTTTTCTTCCGCCGTaGCAGCCGCATTGCCGTTAC +
Preference number: 5 (lower is better)
Translates to: LIFPQPMAQSMGPPLSTCCFLPP*QPHCRY
Trigger: GTAACGGCAATGCGGCTGCAACGGCGGAAGAAAACA...GCAAGTAGATAGAGGTGGTCCCATGCTTTGCGCCATTGGTTGGGGAAAGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CAA 90 bp TTCTCTCCAATCTTAGAGAGTGCAGTATCAAGAATCTTGTCCCCTGTGGTGGACTGCGAGCAAGCGCCGTaGCAGCCGCATTGCCGTTAC +
Preference number: 5 (lower is better)
Translates to: FSPILESAVSRILSPVVDCEQAP*QPHCRY
Trigger: GTAACGGCAATGCGGCTGCAACGGCGCTTGCTCGCA...GTCCACCACAGGGGACAAGATTCTTGATACTGCACTCTCTAAGATTGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535793.5
CDS-3UTR CAA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGCAGCACTCACCGCCGTaGCAGCCGCATTGCCGTTAC +
Preference number: 5 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEQHSPP*QPHCRY
Trigger: GTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCTG...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR CAA 90 bp GATTCACAATCTTCCCAGCCTACGGTGTTAGAGGTGGGGTGGTCAAGAAGTGAAGCAGTATCAAGAATCTaGTCCCCGCCGTTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: DSQSSQPTVLEVGWSRSEAVSRI*SPPLQP
Trigger: CGGCTGCAACGGCGGGGACAAGATTCTTGATACTGC...TTCACTTCTTGACCACCCCACCTCTAACACCGTAGGCTGGGAAGATTGTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR CAA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTGCACTTCTAAGACGTTaGTGTGCAGTTCGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSALLRR*CAVRRL
Trigger: AAGCCTCCGAACTGCACACAAACGTCTTAGAAGTGC...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS CCA 90 bp AAACAGTTGCCTCAGCACAGTCTGAGAGGGGACTACCTAGAAACCTaGGATGCACAGGAAGAAATGCCACAGTCCTCCTTTCCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: KQLPQHSLRGDYLET*DAQEEMPQSSFPWL
Trigger: AAGCCAGGGAAAGGAGGACTGTGGCATTTCTTCCTGTGCATCCCAGGTTTCTAGGTAGTCCCCTCTCAGACTGTGCTGAGGCAACTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539045.1
CDS CCA 90 bp TCAGTAGGTGTGTCACAGCTGGGGACTTGGAGCGTTGGCTGTGGCTaGGAGACCACTATAACACAAAAAGAAGGCGCACTTCTAAGACGT +
Preference number: 5 (lower is better)
Translates to: SVGVSQLGTWSVGCG*ETTITQKEGALLRR
Trigger: ACGTCTTAGAAGTGCGCCTTCTTTTTGTGTTATAGTGGTCTCCCAGCCACAGCCAACGCTCCAAGTCCCCAGCTGTGACACACCTACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650101.1
ENST00000650307.1
CDS CCA 90 bp CCCACCCACGGTAGTAATTCAGTAGGTGTGTCACAGCTGGGGACTTaGAGCGTTGGCTGTGGCTGGGAGACCACTATAACACAAAAAGAA +
Preference number: 5 (lower is better)
Translates to: PTHGSNSVGVSQLGT*SVGCGWETTITQKE
Trigger: TTCTTTTTGTGTTATAGTGGTCTCCCAGCCACAGCCAACGCTCCAAGTCCCCAGCTGTGACACACCTACTGAATTACTACCGTGGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650101.1
ENST00000650307.1
CDS-3UTR CAA 90 bp AAATGTTGTGTTCTCTCCTCTCGGGGTACTGGGCTTCCCATTAGCTTCCACTCCACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: KCCVLSSRGTGLPISFHSTRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...GGAGTGGAAGCTAATGGGAAGCCCAGTACCCCGAGAGGAGAGAACACAACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR CAA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQTRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGGCAGTATCAAGAATCTaGTCCCCTGTGGTGGACATA +
Preference number: 5 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEAVSRI*SPVVDI
Trigger: TATGTCCACCACAGGGGACAAGATTCTTGATACTGC...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGCAGTATCAAGAATCTaGTCCCCTGTGGTGGACATA +
Preference number: 5 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSAVSRI*SPVVDI
Trigger: TATGTCCACCACAGGGGACAAGATTCTTGATACTGC...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACGCAGTATCAAGAATCTaGTCCCCTGTGGTGGACATA +
Preference number: 5 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHAVSRI*SPVVDI
Trigger: TATGTCCACCACAGGGGACAAGATTCTTGATACTGC...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCATTCCGAAGCCGGGTGTaGAGGTTTCCCCGAATACTC +
Preference number: 5 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSFRSRV*RFPRIL
Trigger: GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAA...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCATCTTCATGCTGGGCAGGGACATGGATGGTAGCCTGCATGGTCTCTTGTATGTCCAGTCAGGTACAGTaGCCCATCCTTCATAGCTGT +
Preference number: 5 (lower is better)
Translates to: PSSCWAGTWMVACMVSCMSSQVQ*PILHSC
Trigger: ACAGCTATGAAGGATGGGCAACTGTACCTGACTGGA...CATACAAGAGACCATGCAGGCTACCATCCATGTCCCTGCCCAGCATGAAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CAA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCATTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSLLSNK*ARLMPK
Trigger: CTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAA...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGGAGTGAACAACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTCAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: RSEQPGPLHSSPGHVQAPQTWLR*ESRLCV
Trigger: CACACACAGCCTACTTTCCAAGCGGAGCCATGTCTG...AGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGTTGTTCACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CAA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGCCGTTGCAGCCGCATaGCCGTTACCAGACATGGCT +
Preference number: 5 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEAVAAA*PLPDMA
Trigger: AGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGC...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000652429.1
CDS-3UTR CAA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAATAACCGAAAGAGAGTaGGGGCCACAATTCAGATCT +
Preference number: 5 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPITERE*GPQFRS
Trigger: AGATCTGAATTGTGGCCCCAACTCTCTTTCGGTTAT...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR CAA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGAATCACTCTCATCTTaGGGCTGTTTTCTTCCTAGG +
Preference number: 5 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPESLSS*GCFLPR
Trigger: CCTAGGAAGAAAACAGCCCAAAGATGAGAGTGATTC...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR CAA 90 bp AGGAGTGAACAACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: RSEQPGPLHSSPGHVQAPTRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...AGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGTTGTTCACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CAA 90 bp CCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCCAGATGCGGGAACTTTCTGCAGTATCAAGAATCTaGTCCCCTGTGGTGGACATA +
Preference number: 5 (lower is better)
Translates to: PGVEVSPNTPELQMRELSAVSRI*SPVVDI
Trigger: TATGTCCACCACAGGGGACAAGATTCTTGATACTGC...AGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR CAA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGCAGTATCAAGAATCTaGTCCCCTGTGGTGGACATA +
Preference number: 5 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENAVSRI*SPVVDI
Trigger: TATGTCCACCACAGGGGACAAGATTCTTGATACTGC...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LEPCSSVSRGNHSPDSSEACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...CTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SHQGPKVRQIPGRLEPCSACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...ACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp TCCTGCTGCTCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: SCCSSSFRSRVLRFPRILSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CAA 90 bp ACTTTCTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTCTTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: TFSAAGLLFAGSWFPPHSSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...AGAGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
ENST00000649868.1
CDS-3UTR CAA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGTTCCGAAGCCGGGTGTaGAGGTTTCCCCGAATACTC +
Preference number: 5 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEFRSRV*RFPRIL
Trigger: GAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAA...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCCAGTCAGGTACAGTaGCCCATCCTTCATAGCTGT +
Preference number: 5 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQSSQVQ*PILHSC
Trigger: ACAGCTATGAAGGATGGGCAACTGTACCTGACTGGA...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGTTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEELLSNK*ARLMPK
Trigger: CTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAA...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTTCAAAGGCTGTTGCTaGGACTTCTCTAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPFKGCC*DFSKEM
Trigger: CATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTTCAAAGGCTGTTGCTaGGACTTCTCTAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVFKGCC*DFSKEM
Trigger: CATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp ATGGAAAAACATCCTAGGACATCAGGCCTGATCTTTCCCCAACCAATGGCGCAACAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: MEKHPRTSGLIFPQPMAQQTWLR*ESRLCV
Trigger: CACACACAGCCTACTTTCCAAGCGGAGCCATGTCTG...TTGCGCCATTGGTTGGGGAAAGATCAGGCCTGATGTCCTAGGATGTTTTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CAA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGGCAGTATCAAGAATCTaGTCCCTGATTTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGAVSRI*SLISNC
Trigger: GCAGTTTGAAATCAGGGACAAGATTCTTGATACTGC...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000442944.7
ENST00000650101.1
CDS-3UTR CAA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAATCACTCTCATCTTaGGGCTGTTTTCTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSESLSS*GCFLPA
Trigger: TGCAGGAAGAAAACAGCCCAAAGATGAGAGTGATTC...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648374.1
CDS-3UTR CAA 90 bp GAACTTTCTCTGCAGCTGGGCTGCTCTTCGCAGGGAGCTGGTTCCCACCACACTGAATCACTCTCATCTTaGGGCTGTTTTCTTCCAATA +
Preference number: 5 (lower is better)
Translates to: ELSLQLGCSSQGAGSHHTESLSS*GCFLPI
Trigger: TATTGGAAGAAAACAGCCCAAAGATGAGAGTGATTC...AGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542822.5
CDS-3UTR CAA 90 bp CAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCCAGATGAGACAAGCTTCTTGGTaGAGAACAAAGGGAAGGCAT +
Preference number: 5 (lower is better)
Translates to: QLPKPGVEVSPNTPELQMRQASW*RTKGRH
Trigger: ATGCCTTCCCTTTGTTCTCAACCAAGAAGCTTGTCT...CATCTGGAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CAA 90 bp TACAATAGGGTTACATCAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCATCTTGTCCCCGCCGTaGCAGCCGCATTGCCGTTAC +
Preference number: 5 (lower is better)
Translates to: YNRVTSILLNSRCGNFLCILSPP*QPHCRY
Trigger: GTAACGGCAATGCGGCTGCAACGGCGGGGACAAGAT...GCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAACCCTATTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR CAA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGTAGACGAACGTTCTaGGTCTGGGTCACTAAATCT +
Preference number: 5 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHCRRTF*VWVTKS
Trigger: AGATTTAGTGACCCAGACCAAGAACGTTCGTCTACA...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS-3UTR CAA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAGTGCAGTTCGGAGGCTaGGCTGATACTCTCTCCTAT +
Preference number: 5 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSVQFGG*ADTLSY
Trigger: ATAGGAGAGAGTATCAGCCAAGCCTCCGAACTGCAC...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS GCA 90 bp CCCATTAGCTTCCACTCCTTTCCAGAAAACTCACTGATTTCAAACTaGAGGCCAGGGTACGAGGCTTTCAATGTTGCCACCACACTGTCC +
Preference number: 5 (lower is better)
Translates to: PISFHSFPENSLISN*RPGYEAFNVATTLS
Trigger: GGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGTGAGTTTTCTGGAAAGGAGTGGAAGCTAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535793.5
ENST00000542044.5
ENST00000542822.5
ENST00000545621.5
ENST00000545901.5
ENST00000650307.1
CDS CCA 90 bp CACCCTGTGACCACAGACCTGAGGACATCACTGAAAAGGCAACTGTaGGCCCAGACCTGGTCCTATCCATACACAACATTCAACAAGAAT +
Preference number: 5 (lower is better)
Translates to: HPVTTDLRTSLKRQL*AQTWSYPYTTFNKN
Trigger: ATTCTTGTTGAATGTTGTGTATGGATAGGACCAGGTCTGGGCCCACAGTTGCCTTTTCAGTGATGTCCTCAGGTCTGTGGTCACAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539045.1
ENST00000544182.1
ENST00000546226.5
CDS CCA 90 bp TCTAGTGTTCCTCAACACCTTGTCCAAGAACCAGAATCACTGGCTTaGAAGAAAGGAACTTCAGAACCTGGCCTGTGGCCAGCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: SSVPQHLVQEPESLA*KKGTSEPGLWPAES
Trigger: AGACTCAGCTGGCCACAGGCCAGGTTCTGAAGTTCCTTTCTTCCAAGCCAGTGATTCTGGTTCTTGGACAAGGTGTTGAGGAACACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543543.5
CDS CCA 90 bp CTGTTTCTAGTGTTCCTCAACACCTTGTCCAAGAACCAGAATCACTaGCTTGGAAGAAAGGAACTTCAGAACCTGGCCTGTGGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LFLVFLNTLSKNQNH*LGRKELQNLACGQL
Trigger: CAGCTGGCCACAGGCCAGGTTCTGAAGTTCCTTTCTTCCAAGCCAGTGATTCTGGTTCTTGGACAAGGTGTTGAGGAACACTAGAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543543.5
CDS-3UTR CAA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGGCAGTATCAAGAATCTaGTCCCCTGTGGTGGACATA +
Preference number: 5 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQAVSRI*SPVVDI
Trigger: TATGTCCACCACAGGGGACAAGATTCTTGATACTGC...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000392841.1
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: QGPKVRQIPGRLEPCSSVSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...GACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp TCGTCCAGCTTCCGAAGCCGGGTGTTGAGGTTTCCCCGAATACTCCTGAACTCCTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: SSSFRSRVLRFPRILLNSSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...GGAGTTCAGGAGTATTCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CAA 90 bp CCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: PGRLEPCSSVSRGNHSPDSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...ATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGTTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTELLSNK*ARLMPK
Trigger: CTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAA...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTTTCAAAGGCTGTTGCTaGGACTTCTCTAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITFKGCC*DFSKEM
Trigger: CATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCATTCAAAGGCTGTTGCTaGGACTTCTCTAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSFKGCC*DFSKEM
Trigger: CATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTTCAAAGGCTGTTGCTaGGACTTCTCTAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHFKGCC*DFSKEM
Trigger: CATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AATAGGGTTACATCAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCAGCCAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: NRVTSILLNSRCGNFLCSQTWLR*ESRLCV
Trigger: CACACACAGCCTACTTTCCAAGCGGAGCCATGTCTG...GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAACCCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR CAA 90 bp AGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGCAGTATCAAGAATCTaGTCCCTGATTTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: RLEPCSSVSRGNHSPDSSAVSRI*SLISNC
Trigger: GCAGTTTGAAATCAGGGACAAGATTCTTGATACTGC...ACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442944.7
ENST00000650101.1
CDS-3UTR CAA 90 bp CCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATGGGGGAATCACTCTCATCTTaGGGCTGTTTTCTTCCAATA +
Preference number: 5 (lower is better)
Translates to: PAVQSPGVITPQIAVRMGESLSS*GCFLPI
Trigger: TATTGGAAGAAAACAGCCCAAAGATGAGAGTGATTC...CCCCATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR CAA 90 bp CAAGGCAGTCATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCGAATCACTCTCATCTTaGGGCTGTTTTCTTCCAATA +
Preference number: 5 (lower is better)
Translates to: QGSHQGPKVRQIPGRLEPESLSS*GCFLPI
Trigger: TATTGGAAGAAAACAGCCCAAAGATGAGAGTGATTC...GGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATGACTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537841.5
ENST00000542729.5
CDS-3UTR CAA 90 bp GAGAGTGCAGTATCAAGAATCTTGTCCCCTGTGGTGGACATAGCAACTTCAGAAACCACCTCTATCTACTaGCTCCCCAGCGCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: ESAVSRILSPVVDIATSETTSIY*LPSAFW
Trigger: CCAAAAGGCGCTGGGGAGCAAGTAGATAGAGGTGGT...TTCTGAAGTTGCTATGTCCACCACAGGGGACAAGATTCTTGATACTGCACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS TCA 90 bp GTACTGGGCTTCCCATTAGCTTCCACTCCTTTCCAGAAAACTCACTaGTTTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTTGCCA +
Preference number: 5 (lower is better)
Translates to: VLGFPLASTPFQKTH*FQTAGQGTRLSMLP
Trigger: TGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGTGAGTTTTCTGGAAAGGAGTGGAAGCTAATGGGAAGCCCAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535793.5
ENST00000542044.5
ENST00000542822.5
ENST00000545621.5
ENST00000545901.5
ENST00000650307.1
CDS CCA 90 bp AAAGCTCAAGATGTTAAATGCCAGGCTAATCCAGGTAGTCAGAGCTaGAGGTATTCAGAGGAAAGCACCTTCAGAACTGGGAGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: KAQDVKCQANPGSQS*RYSEESTFRTGSSP
Trigger: TGGGCTGCTCCCAGTTCTGAAGGTGCTTTCCTCTGAATACCTCCAGCTCTGACTACCTGGATTAGCCTGGCATTTAACATCTTGAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542044.5
ENST00000545901.5
ENST00000650307.1
CDS-3UTR CAA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTETRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CCTCGTGGAATGTTACGAGCAGTGATGCCTACCAACTGTGGGTCATCCTCAGGGTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: PRGMLRAVMPTNCGSSSGSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...CCCTGAGGATGACCCACAGTTGGTAGGCATCACTGCTCGTAACATTCCACGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640813.1
ENST00000648026.1
CDS-3UTR CAA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGTCCAGTCAGGTACAGTaGCCCATCCTTCATAGCTGT +
Preference number: 5 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEESSQVQ*PILHSC
Trigger: ACAGCTATGAAGGATGGGCAACTGTACCTGACTGGA...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATTTCAAAGGCTGTTGCTaGGACTTCTCTAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENFKGCC*DFSKEM
Trigger: CATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp ATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGGTTTATTAGTAGGATaGGTTACATTCAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: IPGRLEPCSSVSRGNHSPGLLVG*VTFKGC
Trigger: ACAGCCTTTGAATGTAACCAATCCTACTAATAAACC...TGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCATCAGTGTTCCTCAACACCTaGTCCAAGAACCAGAATCAC +
Preference number: 5 (lower is better)
Translates to: DFSKEMKPPHTEEARQSSVFLNT*SKNQNH
Trigger: GTGATTCTGGTTCTTGGACAAGGTGTTGAGGAACAC...TGATGACTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648374.1
CDS-3UTR CAA 90 bp GATCTTTCCCCAACCAATGGCGCAAAGCATGGGACCACCTCTATCTACTTGCTCTGTGAGACAAGCTTCTaGGTTGAGAACAAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: DLSPTNGAKHGTTSIYLLCETSF*VENKGK
Trigger: CTTCCCTTTGTTCTCAACCAAGAAGCTTGTCTCACA...GAGCAAGTAGATAGAGGTGGTCCCATGCTTTGCGCCATTGGTTGGGGAAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS CCA 90 bp ACAGACCTGAGGACATCACTGAAAAGGCAACTGTGGGCCCAGACCTaGTCCTATCCATACACAACATTCAACAAGAATGAGTTAGCACTG +
Preference number: 5 (lower is better)
Translates to: TDLRTSLKRQLWAQT*SYPYTTFNKNELAL
Trigger: CAGTGCTAACTCATTCTTGTTGAATGTTGTGTATGGATAGGACCAGGTCTGGGCCCACAGTTGCCTTTTCAGTGATGTCCTCAGGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539045.1
ENST00000544182.1
ENST00000546226.5
CDS-3UTR CAA 90 bp GCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTACTTTCCGCAGTATCAAGAATCTaGTCCCCTGTGGTGGACATA +
Preference number: 5 (lower is better)
Translates to: AFLRVQDYMPDTALKVLSAVSRI*SPVVDI
Trigger: TATGTCCACCACAGGGGACAAGATTCTTGATACTGC...GGAAAGTACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR CAA 90 bp GAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTCCCCAGATAGCAGTGAGAATTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: EPCSSVSRGNHSPDSSENSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...ATTCTCACTGCTATCTGGGGAGTGATTACCCCGGGAGACTGAACTGCAGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGTCCAGTCAGGTACAGTaGCCCATCCTTCATAGCTGT +
Preference number: 5 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTESSQVQ*PILHSC
Trigger: ACAGCTATGAAGGATGGGCAACTGTACCTGACTGGA...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGAAATCCCTGGAAGGCTaGAACCCTGCAGTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTEKSLEG*NPAVQS
Trigger: AGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTT...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACTGGTTTATTAGTAGGATaGGTTACATTCAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: GKSLEGLNPAVQSPGVITGLLVG*VTFKGC
Trigger: ACAGCCTTTGAATGTAACCAATCCTACTAATAAACC...AGTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGTCTCCCGGGGTAATCACGGTTTATTAGTAGGATaGGTTACATTCAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: RQIPGRLEPCSSVSRGNHGLLVG*VTFKGC
Trigger: ACAGCCTTTGAATGTAACCAATCCTACTAATAAACC...GTGATTACCCCGGGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CATCAAGGCCCCAAGGTGAGGCAAATCCCTGGAAGGCTTGAACCCTGCAGTTCAGGTTTATTAGTAGGATaGGTTACATTCAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: HQGPKVRQIPGRLEPCSSGLLVG*VTFKGC
Trigger: ACAGCCTTTGAATGTAACCAATCCTACTAATAAACC...TGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGGGGCCTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS TCA 90 bp AGATCACCTCTATTCTCTCTCGATTGCCAACTCACTGGTATTTCTTaGGTTTTCTGCCACCAGTCAACACTCCTCAGGGCAGAGGAGATA +
Preference number: 5 (lower is better)
Translates to: RSPLFSLDCQLTGIS*VFCHQSTLLRAEEI
Trigger: TATCTCCTCTGCCCTGAGGAGTGTTGACTGGTGGCAGAAAACTCAAGAAATACCAGTGAGTTGGCAATCGAGAGAGAATAGAGGTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546226.5
CDS CCA 90 bp GGGCTGTTTTCTTCTTCTAAGACGTTTGTGTGCAGTTCGGAGGCTTaGCTGATACTCTCTCCTATGAATCAAAAGTGGAACGTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GLFSSSKTFVCSSEA*LILSPMNQKWNVSS
Trigger: GGAAGACACGTTCCACTTTTGATTCATAGGAGAGAGTATCAGCCAAGCCTCCGAACTGCACACAAACGTCTTAGAAGAAGAAAACAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649823.1
CDS CCA 90 bp AAAAGAAGGCGCACTTCTAAGACGTTTGTGTGCAGTTCGGAGGCTTaGCTGATACTCTCTCCTATGAATCAAAAGTGGAACGTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: KRRRTSKTFVCSSEA*LILSPMNQKWNVSS
Trigger: GGAAGACACGTTCCACTTTTGATTCATAGGAGAGAGTATCAGCCAAGCCTCCGAACTGCACACAAACGTCTTAGAAGTGCGCCTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650101.1
ENST00000650307.1
CDS-3UTR CAA 90 bp GCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAAAGTACTTTCCGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: AFLRVQDYMPDTALKVLSACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...GGAAAGTACTTTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR CAA 90 bp TGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGCAAGGCAGTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: CLDFSKEMKPPHTEEARQSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...CTGCCTTGCCTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGTGTTTTCTTCCGCCGTaGCAGCCGCATTGCCGTTAC +
Preference number: 5 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKCFLPP*QPHCRY
Trigger: GTAACGGCAATGCGGCTGCAACGGCGGAAGAAAACA...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544387.5
ENST00000652429.1
CDS-3UTR CAA 90 bp ATTCTTCTCCAGGGCATGTTCAAGCTCCTTGGTAAACAGGCTTTTCTCTCCAATGCAGTATCAAGAATCTaGTCCCCTGTGGTGGACATA +
Preference number: 5 (lower is better)
Translates to: ILLQGMFKLLGKQAFLSNAVSRI*SPVVDI
Trigger: TATGTCCACCACAGGGGACAAGATTCTTGATACTGC...ATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR CAA 90 bp CTTCTCCAGGGCATGTTCAAGCTCCTTGGTAAACAGGCTTTTCTCTCCAATCTTGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LLQGMFKLLGKQAFLSNLACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...AAGATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542822.5
ENST00000545621.5
CDS-3UTR CAA 90 bp AGACAAGCTTCTTGGTTGAGAACAAAGGGAAGGCATATGTCACCATGTGGCTTCGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: RQASWLRTKGRHMSPCGFACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...GAAGCCACATGGTGACATATGCCTTCCCTTTGTTCTCAACCAAGAAGCTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545621.5
CDS-3UTR CAA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDLLSNK*ARLMPK
Trigger: CTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAA...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTTTGCTCAGCAACAAGTaGGCCAGGCTGATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLLLSNK*ARLMPK
Trigger: CTTGGGCATCAGCCTGGCCAACTTGTTGCTGAGCAA...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS TCA 90 bp GACATAGCAACTGAGGAGAGAGTCAATCAATCAGGTGCTCATTATTaGTCAGCATTTACTGAGCCTAGCGCTGTGCTACGATTCATGATG +
Preference number: 5 (lower is better)
Translates to: DIATEERVNQSGAHY*SAFTEPSAVLRFMM
Trigger: CATCATGAATCGTAGCACAGCGCTAGGCTCAGTAAATGCTGATCAATAATGAGCACCTGATTGATTGACTCTCTCCTCAGTTGCTATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542044.5
ENST00000650307.1
CDS TCA 90 bp GAGTGCAGTATCAAGAATCTTGTCCCCTGTGGTGGACATAGCAACTaGGGAGAGAGTCAATCAATCAGGTGCTCATTATTGATCAGCATT +
Preference number: 5 (lower is better)
Translates to: ECSIKNLVPCGGHSN*GESQSIRCSLLISI
Trigger: AATGCTGATCAATAATGAGCACCTGATTGATTGACTCTCTCCTCAGTTGCTATGTCCACCACAGGGGACAAGATTCTTGATACTGCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542044.5
ENST00000650307.1
CDS GCA 90 bp GACCACTATAACACAAAAAGAAGGCGCACTTCTAAGACGTTTGTGTaGAGTTCGGAGGCTTGGCTGATACTCTCTCCTATGAATCAAAAG +
Preference number: 5 (lower is better)
Translates to: DHYNTKRRRTSKTFV*SSEAWLILSPMNQK
Trigger: CTTTTGATTCATAGGAGAGAGTATCAGCCAAGCCTCCGAACTGCACACAAACGTCTTAGAAGTGCGCCTTCTTTTTGTGTTATAGTGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650101.1
ENST00000650307.1
CDS-3UTR CAA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDTRLSM*PPHCPS
Trigger: AGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGT...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEESSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAGCATACATGCATTCCTCAGGGTGCAGGATTACATGCCAGACACTGCTCTAAATCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: QHTCIPQGAGLHARHCSKSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...TTTAGAGCAGTGTCTGGCATGTAATCCTGCACCCTGAGGAATGCATGTATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS-3UTR CAA 90 bp AATAGGGTTACATCAATACTCCTGAACTCCAGATGCGGGAACTTTCTCTGCAGCGAAGACAGATGGTCCTaGACTTACAATAGGGTTACA +
Preference number: 5 (lower is better)
Translates to: NRVTSILLNSRCGNFLCSEDRWS*TYNRVT
Trigger: TGTAACCCTATTGTAAGTCAAGGACCATCTGTCTTC...GCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAACCCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS-3UTR CAA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGGCAGTATCAAGAATCTaGTCCCCTGTGGTGGACATA +
Preference number: 5 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKAVSRI*SPVVDI
Trigger: TATGTCCACCACAGGGGACAAGATTCTTGATACTGC...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GAGAGTGCAGTATCAAGAATCTTGTCCCCTGTGGTGGACATAGCAACTTCAGAATCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: ESAVSRILSPVVDIATSESSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...TTCTGAAGTTGCTATGTCCACCACAGGGGACAAGATTCTTGATACTGCACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535793.5
ENST00000545621.5
CDS-3UTR CAA 90 bp TTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: FKGCCLDFSKEMKPPHTESSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...CTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000650101.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTAAATCCCTGGAAGGCTaGAACCCTGCAGTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLKSLEG*NPAVQS
Trigger: AGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTT...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp AAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGCCCCCACATACTGAGGAGGGTTTATTAGTAGGATaGGTTACATTCAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: KGCCLDFSKEMKPPHTEEGLLVG*VTFKGC
Trigger: ACAGCCTTTGAATGTAACCAATCCTACTAATAAACC...CTCCTCAGTATGTGGGGGCTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp CAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTGCAGTATCAAGAATCTaGTCCCCTGTGGTGGACATA +
Preference number: 5 (lower is better)
Translates to: QNWFISRIGYIQRLLLGLAVSRI*SPVVDI
Trigger: TATGTCCACCACAGGGGACAAGATTCTTGATACTGC...AAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKACSSS*VNRLFS
Trigger: AGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGC...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp GTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTAAAGAGATGAAGTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCAT +
Preference number: 5 (lower is better)
Translates to: VGLVTFKGCCLDFSKEMKSSQQI*GERQQH
Trigger: ATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGA...CTTCATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000543090.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp ACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCTCTTTCAAAGGCTGTTGCTaGGACTTCTCTAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: TGLLVGLVTFKGCCLDFSFKGCC*DFSKEM
Trigger: CATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA...AGAGAAGTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS-3UTR CAA 90 bp TTCAGAACTGGTTTATTAGTAGGATTGGTTACATTCAAAGGCTGTTGCTTGGACTTCAAAGGCTGTTGCTaGGACTTCTCTAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: FRTGLLVGLVTFKGCCLDFKGCC*DFSKEM
Trigger: CATCTCTTTAGAGAAGTCCAAGCAACAGCCTTTGAA...GTCCAAGCAACAGCCTTTGAATGTAACCAATCCTACTAATAAACCAGTTCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392841.1
ENST00000542729.5
ENST00000544387.5
ENST00000648374.1
ENST00000652429.1
CDS GCA 72 bp ACTTCCACGCCCAAGGCCCCCTGCCCCACCCGGTTGTaGCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGG +
Preference number: 6 (lower is better)
Translates to: TSTPKAPCPTRL*QPMRCRPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGGGGCCTTGGGCGTGGAAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS CCA 72 bp AGCCGGGGGCTCCGGCCGGCGAGTACCGGGGACACGTaGGACCCGAGGTCGTCCTACAGTCTGACTCCTGGT +
Preference number: 6 (lower is better)
Translates to: SRGLRPASTGDT*DPRSSYSLTPG
Trigger: ACCAGGAGTCAGACTGTAGGACGACCTCGGGTCCCACGTGTCCCCGGTACTCGCCGGCCGGAGCCCCCGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000442944.7
ENST00000536185.5
ENST00000537841.5
ENST00000542729.5
ENST00000543821.5
ENST00000545621.5
ENST00000545901.5
ENST00000546302.6
ENST00000640813.1
ENST00000652429.1
CDS GCA 72 bp AGGATAGGGGCAGGCCCTACCTGCCCCACCCGGTTGTaGCAGCCCATGCGCTGCAGGCCAGCTGTTGCCAGG +
Preference number: 6 (lower is better)
Translates to: RIGAGPTCPTRL*QPMRCRPAVAR
Trigger: CCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGGGCCTGCCCCTATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544360.5
CDS GCA 72 bp GCCCCCTGCCCCACCCGGTTGTGCCAGCCCATGCGCTaGAGGCCAGCTGTTGCCAGGATGATGGCACTGAAC +
Preference number: 6 (lower is better)
Translates to: APCPTRLCQPMR*RPAVARMMALN
Trigger: GTTCAGTGCCATCATCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS CCA 72 bp CACGTGGGACCCGAGGTCGTCCTACAGTCTGACTCCTaGTCTCCGCAGAGCCTCGCGTCACTTCCGGCGCCC +
Preference number: 6 (lower is better)
Translates to: HVGPEVVLQSDS*SPQSLASLPAP
Trigger: GGGCGCCGGAAGTGACGCGAGGCTCTGCGGAGACCAGGAGTCAGACTGTAGGACGACCTCGGGTCCCACGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536185.5
CDS TCA 72 bp CCGGGGACACGTGGGACCCGAGGTCGTCCTACAGTCTaGCTCCTGGTCTCCGCAGAGCCTCGCGTCACTTCC +
Preference number: 6 (lower is better)
Translates to: PGTRGTRGRPTV*LLVSAEPRVTS
Trigger: GGAAGTGACGCGAGGCTCTGCGGAGACCAGGAGTCAGACTGTAGGACGACCTCGGGTCCCACGTGTCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536185.5
CDS CCA 72 bp ACCAGACATGGCTCCGCTTGGAAAGTAGGCTGTGTGTaGGTGCCGCTAAGGTCCCCCGGCCCCGGGAAGCCG +
Preference number: 6 (lower is better)
Translates to: TRHGSAWKVGCV*VPLRSPGPGKP
Trigger: CGGCTTCCCGGGGCCGGGGGACCTTAGCGGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000442944.7
ENST00000535793.5
ENST00000536185.5
ENST00000536813.6
ENST00000537841.5
ENST00000542044.5
ENST00000542729.5
ENST00000542822.5
ENST00000543090.5
ENST00000543821.5
ENST00000544387.5
ENST00000545621.5
ENST00000545901.5
ENST00000546302.6
ENST00000640813.1
ENST00000652429.1
CDS CAA 90 bp TCGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCCAAGGCCCCCTGCCCCACCCGGTTG +
Preference number: 6 (lower is better)
Translates to: SGSCSTPTRSKMSWS*ARTSTPKAPCPTRL
Trigger: CAACCGGGTGGGGCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS CCA 72 bp GCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCAAGGCCCCCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: AAHPPDPRCPGP*LALPRPRPPGP
Trigger: TGGGCCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000536813.6
ENST00000537841.5
ENST00000542044.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000650307.1
ENST00000652429.1
CDS CCA 72 bp ATCGCTGCACGGCTCGTCCAGAAGCCCAAAGTGTGCTaGTCACCGGCTCAGCACTCACCGCCGTTGCAGCCG +
Preference number: 6 (lower is better)
Translates to: IAARLVQKPKVC*SPAQHSPPLQP
Trigger: CGGCTGCAACGGCGGTGAGTGCTGAGCCGGTGACCAGCACACTTTGGGCTTCTGGACGAGCCGTGCAGCGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS CCA 72 bp GCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTTaGCTCGCACTTCCACGCCCAAGGCCCCCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: AAHPPDPRCPGP*LALPRPRPPAP
Trigger: TGGGGCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS CAA 72 bp TGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCCAAGGCCCCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: CSTPTRSKMSWS*ARTSTPKAPWP
Trigger: GGGCCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000536813.6
ENST00000537841.5
ENST00000542044.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000650307.1
ENST00000652429.1
CDS CAA 72 bp TGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCCAAGGCCCCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: CSTPTRSKMSWS*ARTSTPKAPCP
Trigger: GGGGCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543090.5
CDS CAA 90 bp CTTCCGCCGTTGCAGCCGCATTGCCGTTACCAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTGGGTGCCGCTAAGGTCCCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: LPPLQPHCRYQTWLR*ESRLCVGAAKVPRP
Trigger: GGGCCGGGGGACCTTAGCGGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000442944.7
ENST00000536185.5
ENST00000543821.5
ENST00000544387.5
ENST00000545621.5
ENST00000545901.5
ENST00000546302.6
ENST00000640813.1
ENST00000652429.1
CDS CAA 90 bp CAAGCGCCGTTGCAGCCGCATTGCCGTTACCAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTGGGTGCCGCTAAGGTCCCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: QAPLQPHCRYQTWLR*ESRLCVGAAKVPRP
Trigger: GGGCCGGGGGACCTTAGCGGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542044.5
ENST00000543090.5
CDS CAA 90 bp TCACCGCCGTTGCAGCCGCATTGCCGTTACCAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTGGGTGCCGCTAAGGTCCCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: SPPLQPHCRYQTWLR*ESRLCVGAAKVPRP
Trigger: GGGCCGGGGGACCTTAGCGGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS GCA 72 bp CCAATCGCTGCACGGCTCGTCCAGAAGCCCAAAGTGTaGTGGTCACCGGCTCAGCACTCACCGCCGTTGCAG +
Preference number: 6 (lower is better)
Translates to: PIAARLVQKPKV*WSPAQHSPPLQ
Trigger: CTGCAACGGCGGTGAGTGCTGAGCCGGTGACCAGCACACTTTGGGCTTCTGGACGAGCCGTGCAGCGATTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS CAA 90 bp TCGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCCAAGGCCCCCTGGCCCACAGCATAC +
Preference number: 6 (lower is better)
Translates to: SGSCSTPTRSKMSWS*ARTSTPKAPWPTAY
Trigger: GTATGCTGTGGGCCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000536813.6
ENST00000537841.5
ENST00000542044.5
ENST00000648026.1
ENST00000648374.1
ENST00000650101.1
ENST00000650307.1
ENST00000652429.1
CDS CAA 90 bp ATGACGCCGTTGCAGCCGCATTGCCGTTACCAGACATGGCTCCGCTaGGAAAGTAGGCTGTGTGTGGGTGCCGCTAAGGTCCCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: MTPLQPHCRYQTWLR*ESRLCVGAAKVPRP
Trigger: GGGCCGGGGGACCTTAGCGGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536813.6
CDS GCA 72 bp AAGTGTGCTGGTCACCGGCTCAGCACTCACCGCCGTTaGAGCCGCATTGCCGTTACCAGACATGGCTCCGCT +
Preference number: 6 (lower is better)
Translates to: KCAGHRLSTHRR*SRIAVTRHGSA
Trigger: AGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCTGAGCCGGTGACCAGCACACTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS GCA 72 bp CCGTGCATCCCAGGCCTGATGGGAATCCCACCCAGATaGCCGCAGGGACCGGAGTTCCGTTCCAAACAATCC +
Preference number: 6 (lower is better)
Translates to: PCIPGLMGIPPR*PQGPEFRSKQS
Trigger: GGATTGTTTGGAACGGAACTCCGGTCCCTGCGGGCATCTGGGTGGGATTCCCATCAGGCCTGGGATGCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
CDS CCA 72 bp GGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTaGTCCTTGGCTCGCACTTCCACGCCCAAGGCCCCA +
Preference number: 6 (lower is better)
Translates to: GSCSTPTRSKMS*SLARTSTPKAP
Trigger: TGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640813.1
CDS CCA 72 bp TCCCCGCCGTTGCAGCCGCATTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGGCTGTGTGTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: SPPLQPHCRYQT*LRLESRLCVGA
Trigger: GGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS CAA 72 bp AAAGTGTGCTGGTCACCGGCTCAGCACTCACCGCCGTaGCAGCCGCATTGCCGTTACCAGACATGGCTCCGC +
Preference number: 6 (lower is better)
Translates to: KVCWSPAQHSPP*QPHCRYQTWLR
Trigger: GCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCTGAGCCGGTGACCAGCACACTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS GCA 72 bp TCACCGGCTCAGCACTCACCGCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTCCGCTTGGAAAGTAGG +
Preference number: 6 (lower is better)
Translates to: SPAQHSPPLQPH*RYQTWLRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCTGAGCCGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS CCA 72 bp CTTCCGCCGTTGCAGCCGCATTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGGCTGTGTGTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: LPPLQPHCRYQT*LRLESRLCVGA
Trigger: GGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000442944.7
ENST00000536185.5
ENST00000543821.5
ENST00000544387.5
ENST00000545621.5
ENST00000545901.5
ENST00000546302.6
ENST00000640813.1
ENST00000652429.1
CDS CCA 72 bp CAAGCGCCGTTGCAGCCGCATTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGGCTGTGTGTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: QAPLQPHCRYQT*LRLESRLCVGA
Trigger: GGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542044.5
ENST00000543090.5
CDS CCA 72 bp TCACCGCCGTTGCAGCCGCATTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGGCTGTGTGTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: SPPLQPHCRYQT*LRLESRLCVGA
Trigger: GGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS CAA 72 bp TGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCCAAGGCCCCAATAGGG +
Preference number: 6 (lower is better)
Translates to: CSTPTRSKMSWS*ARTSTPKAPIG
Trigger: CCCTATTGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640813.1
CDS CAA 90 bp CAGAAGCCCAAAGTGTGCTGGTCACCGGCTCAGCACTCACCGCCGTaGCAGCCGCATTGCCGTTACCAGACATGGCTCCGCTTGGAAAGT +
Preference number: 6 (lower is better)
Translates to: QKPKVCWSPAQHSPP*QPHCRYQTWLRLES
Trigger: ACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGTGAGTGCTGAGCCGGTGACCAGCACACTTTGGGCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537841.5
ENST00000542729.5
ENST00000542822.5
CDS TCA 72 bp GGGCCGTATCTGCATCCGCCTCAGCCCAGCCTCGAATaGAAGGACCCCGTCTGTGTAGACGAACGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: GPYLHPPQPSLE*KDPVCVDERSW
Trigger: CCAAGAACGTTCGTCTACACAGACGGGGTCCTTTCATTCGAGGCTGGGCTGAGGCGGATGCAGATACGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
CDS GCA 72 bp CCGTCTGTATGCGAGCAAGCGCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTCCGCTTGGAAAGTAGG +
Preference number: 6 (lower is better)
Translates to: PSVCEQAPLQPH*RYQTWLRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGCTTGCTCGCATACAGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535793.5
ENST00000542044.5
ENST00000543090.5
CDS GCA 72 bp GTCCAGGGCTCTGGAATGACGCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTCCGCTTGGAAAGTAGG +
Preference number: 6 (lower is better)
Translates to: VQGSGMTPLQPH*RYQTWLRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGTCATTCCAGAGCCCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536813.6
CDS CCA 72 bp ATGACGCCGTTGCAGCCGCATTGCCGTTACCAGACATaGCTCCGCTTGGAAAGTAGGCTGTGTGTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: MTPLQPHCRYQT*LRLESRLCVGA
Trigger: GGCACCCACACACAGCCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536813.6
CDS CAA 72 bp TTCCTACTCCTAGTCCAGGGCTCTGGAATGACGCCGTaGCAGCCGCATTGCCGTTACCAGACATGGCTCCGC +
Preference number: 6 (lower is better)
Translates to: FLLLVQGSGMTP*QPHCRYQTWLR
Trigger: GCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGTCATTCCAGAGCCCTGGACTAGGAGTAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536813.6
CDS CAA 90 bp TCGGGATCGTGCAGCACACCCACCAGATCCAAGATGTCCTGGTCCTaGGCTCGCACTTCCACGCCCAAGGCCCCAATAGGGTTACATCAA +
Preference number: 6 (lower is better)
Translates to: SGSCSTPTRSKMSWS*ARTSTPKAPIGLHQ
Trigger: TTGATGTAACCCTATTGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640813.1
CDS GCA 72 bp CTTTCAGCGATGCAGCGAAGCAGAGTCTCGGGATCGTaGAGCACACCCACCAGATCCAAGATGTCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: LSAMQRSRVSGS*STPTRSKMSWS
Trigger: GGACCAGGACATCTTGGATCTGGTGGGTGTGCTGCACGATCCCGAGACTCTGCTTCGCTGCATCGCTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000537841.5
ENST00000542044.5
ENST00000543090.5
ENST00000543543.5
ENST00000544182.1
ENST00000546226.5
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
ENST00000652429.1
CDS CCA 72 bp GCTCTTGCGGGTACCCACGCGAATCACTCTCATCTTTaGGCTGTTTTCTTCCGCCGTTGCAGCCGCATTGCC +
Preference number: 6 (lower is better)
Translates to: ALAGTHANHSHL*AVFFRRCSRIA
Trigger: GGCAATGCGGCTGCAACGGCGGAAGAAAACAGCCCAAAGATGAGAGTGATTCGCGTGGGTACCCGCAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000442944.7
ENST00000536185.5
ENST00000543821.5
ENST00000544387.5
ENST00000545621.5
ENST00000545901.5
ENST00000546302.6
ENST00000640813.1
ENST00000648026.1
ENST00000652429.1
CDS CAA 72 bp GGCTCTTGCGGGTACCCACGCGAATCACTCTCATCTTaGGGCTGTTTTCTTCCGCCGTTGCAGCCGCATTGC +
Preference number: 6 (lower is better)
Translates to: GSCGYPRESLSS*GCFLPPLQPHC
Trigger: GCAATGCGGCTGCAACGGCGGAAGAAAACAGCCCAAAGATGAGAGTGATTCGCGTGGGTACCCGCAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000442944.7
ENST00000536185.5
ENST00000543821.5
ENST00000544387.5
ENST00000545621.5
ENST00000545901.5
ENST00000546302.6
ENST00000640813.1
ENST00000648026.1
ENST00000652429.1
CDS GCA 72 bp CCAGTCAGGTACAGTTGCCCATCCTTCATAGCTGTATaGACGGCTACTGGCACACTGCAGCCTCCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: PVRYSCPSFIAV*TATGTLQPPSW
Trigger: CCAGGAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTACCTGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542729.5
ENST00000544387.5
CDS GCA 72 bp CTTCCCTGGTCAAGTGTACCTGGCCCACAGCATACATaGATTCCTCAGGGTGCAGGATCTGTGGAGGCGGAA +
Preference number: 6 (lower is better)
Translates to: LPWSSVPGPQHT*IPQGAGSVEAE
Trigger: TTCCGCCTCCACAGATCCTGCACCCTGAGGAATGCATGTATGCTGTGGGCCAGGTACACTTGACCAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544182.1
CDS CCA 72 bp CACAGCATACATGCATTCCTCAGGGTGCAGGATCTGTaGAGGCGGAACAGGGAGTCAAAAGGGTGGACACGG +
Preference number: 6 (lower is better)
Translates to: HSIHAFLRVQDL*RRNRESKGWTR
Trigger: CCGTGTCCACCCTTTTGACTCCCTGTTCCGCCTCCACAGATCCTGCACCCTGAGGAATGCATGTATGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544182.1
CDS CAA 72 bp ACCCCTGCCCAAGCCCCTTACTTGCAAGACTCTTACTaGCAGATGGCTCCGATGGTGAAGCCAGGAGGAAGC +
Preference number: 6 (lower is better)
Translates to: TPAQAPYLQDSY*QMAPMVKPGGS
Trigger: GCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGTAAGAGTCTTGCAAGTAAGGGGCTTGGGCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546226.5
CDS CAA 90 bp GCCCAGCCTCGAATGAAAGGACCCCGTCTGTGTAGACGAACGTTCTaGGTCTGGGTCACTAAATCTAGAGCCGTGCATCCCAGGCCTGAT +
Preference number: 6 (lower is better)
Translates to: AQPRMKGPRLCRRTF*VWVTKSRAVHPRPD
Trigger: ATCAGGCCTGGGATGCACGGCTCTAGATTTAGTGACCCAGACCAAGAACGTTCGTCTACACAGACGGGGTCCTTTCATTCGAGGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
CDS TCA 72 bp AGGGTGGACACGGGGGTGTCTAAAAGCACCTGGCAGTaGGATGGGAGTTCCCTATCATCTAGAAAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: RVDTGVSKSTWQ*DGSSLSSRKPG
Trigger: CCCAGGCTTTCTAGATGATAGGGAACTCCCATCTCACTGCCAGGTGCTTTTAGACACCCCCGTGTCCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544182.1
CDS GCA 72 bp TCTTTGGGCTGTTTTCTTCCGCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTCCGCTTGGAAAGTAGG +
Preference number: 6 (lower is better)
Translates to: SLGCFLPPLQPH*RYQTWLRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGAAGAAAACAGCCCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000442944.7
ENST00000536185.5
ENST00000543821.5
ENST00000544387.5
ENST00000545621.5
ENST00000545901.5
ENST00000546302.6
ENST00000640813.1
ENST00000652429.1
CDS GCA 72 bp TTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTGTATGCGAGCAAGCGC +
Preference number: 6 (lower is better)
Translates to: FKLQARVRGFQC*HHTVRLYASKR
Trigger: GCGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000534956.2
ENST00000535793.5
ENST00000542044.5
ENST00000543090.5
CDS GCA 72 bp CCAGTCAGGTACAGTTGCCCATCCTTCATAGCTGTATaGACGGCTACTGGCACACTGCAGCCTCCTTCCTGT +
Preference number: 6 (lower is better)
Translates to: PVRYSCPSFIAV*TATGTLQPPSC
Trigger: ACAGGAAGGAGGCTGCAGTGTGCCAGTAGCCGTGCATACAGCTATGAAGGATGGGCAACTGTACCTGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544182.1
ENST00000546226.5
CDS GCA 72 bp GTATCAAGAATCTTGTCCCCGCCGTTGCAGCCGCATTaGCGTTACCAGACATGGCTCCGCTTGGAAAGTAGG +
Preference number: 6 (lower is better)
Translates to: VSRILSPPLQPH*RYQTWLRLESR
Trigger: CCTACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGGGGACAAGATTCTTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649868.1
CDS GCA 72 bp GAACGTTCTTGGTCTGGGTCACTAAATCTAGAGCCGTaGATCCCAGGCCTGATGGGAATCCCACCCAGATGC +
Preference number: 6 (lower is better)
Translates to: ERSWSGSLNLEP*IPGLMGIPPRC
Trigger: GCATCTGGGTGGGATTCCCATCAGGCCTGGGATGCACGGCTCTAGATTTAGTGACCCAGACCAAGAACGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
CDS CCA 72 bp AGGTGTGTCACAGCTGGGGACTTGGAGCGTTGGCTGTaGCTGGGAGACCACTATAACACAAAAAGAAGGCGC +
Preference number: 6 (lower is better)
Translates to: RCVTAGDLERWL*LGDHYNTKRRR
Trigger: GCGCCTTCTTTTTGTGTTATAGTGGTCTCCCAGCCACAGCCAACGCTCCAAGTCCCCAGCTGTGACACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650101.1
ENST00000650307.1
CDS CAA 90 bp GTCCCCAGGTCACAGTCCCCTCTGTTTCTAGTGTTCCTCAACACCTaGTCCAAGAACCAGAATCACTGGCTTCTGCCCTCCTCAGGGATC +
Preference number: 6 (lower is better)
Translates to: VPRSQSPLFLVFLNT*SKNQNHWLLPSSGI
Trigger: GATCCCTGAGGAGGGCAGAAGCCAGTGATTCTGGTTCTTGGACAAGGTGTTGAGGAACACTAGAAACAGAGGGGACTGTGACCTGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535253.5
CDS CAA 90 bp ATTCAGATCTTCCTACTCCTAGTCCAGGGCTCTGGAATGACGCCGTaGCAGCCGCATTGCCGTTACCAGACATGGCTCCGCTTGGAAAGT +
Preference number: 6 (lower is better)
Translates to: IQIFLLLVQGSGMTP*QPHCRYQTWLRLES
Trigger: ACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGCGTCATTCCAGAGCCCTGGACTAGGAGTAGGAAGATCTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536813.6
CDS TCA 72 bp GAAGAAAGGAACTTCAGAACCTGGCCTGTGGCCAGCTaGGTCTCAGAGTGGGGAAATACTCCAAGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: EERNFRTWPVAS*VSEWGNTPRLV
Trigger: GACCAGCCTTGGAGTATTTCCCCACTCTGAGACTCAGCTGGCCACAGGCCAGGTTCTGAAGTTCCTTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543543.5
CDS TCA 72 bp ACGCCCAAGGCCCCAATAGGGTTACATCAATACTCCTaGACTCCAGATGCGGGAACTTTCTCTGCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: TPKAPIGLHQYS*TPDAGTFSAAG
Trigger: CCCAGCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAACCCTATTGGGGCCTTGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640813.1
CDS GCA 72 bp TTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTGTATGCGAGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: FKLQARVRGFQC*HHTVRLYASKL
Trigger: CAGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000535253.5
ENST00000536185.5
ENST00000536813.6
ENST00000537841.5
ENST00000542345.5
ENST00000542729.5
ENST00000542822.5
ENST00000543543.5
ENST00000543821.5
ENST00000544360.5
ENST00000544387.5
ENST00000545621.5
ENST00000545901.5
ENST00000546226.5
ENST00000546302.6
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000648488.1
ENST00000649823.1
ENST00000650101.1
ENST00000652429.1
CDS GCA 72 bp GATCTTCCTACTCCTAGTCCAGGGCTCTGGAATGACTaGAAGAGCAAAGATCCCAGCCCTCACCAACAGGCT +
Preference number: 6 (lower is better)
Translates to: DLPTPSPGLWND*KSKDPSPHQQA
Trigger: AGCCTGTTGGTGAGGGCTGGGATCTTTGCTCTTGCAGTCATTCCAGAGCCCTGGACTAGGAGTAGGAAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650101.1
CDS CCA 72 bp CCGTCTAGACTCCAGACTCCTCCAGTCAGGTACAGCTaGGGAAGAAAACAGTTGCCTCAGCACAGTCTGAGA +
Preference number: 6 (lower is better)
Translates to: PSRLQTPPVRYS*GRKQLPQHSLR
Trigger: TCTCAGACTGTGCTGAGGCAACTGTTTTCTTCCCCAGCTGTACCTGACTGGAGGAGTCTGGAGTCTAGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539045.1
CDS CCA 72 bp AAAGGACCCCGTCTGTGTAGACGAACGTTCTTGGTCTaGGTCACTAAATCTAGAGCCGTGCATCCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: KGPRLCRRTFLV*VTKSRAVHPRP
Trigger: AGGCCTGGGATGCACGGCTCTAGATTTAGTGACCCAGACCAAGAACGTTCGTCTACACAGACGGGGTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
CDS CCA 72 bp GTGTCACAGCTGGGGACTTGGAGCGTTGGCTGTGGCTaGGAGACCACTATAACACAAAAAGAAGGCGCACTT +
Preference number: 6 (lower is better)
Translates to: VSQLGTWSVGCG*ETTITQKEGAL
Trigger: AAGTGCGCCTTCTTTTTGTGTTATAGTGGTCTCCCAGCCACAGCCAACGCTCCAAGTCCCCAGCTGTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650101.1
ENST00000650307.1
CDS CAA 72 bp TTTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCTGTATGCGAGCAAGCG +
Preference number: 6 (lower is better)
Translates to: FQTAGQGTRLSM*PPHCPSVCEQA
Trigger: CGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000534956.2
ENST00000535793.5
ENST00000542044.5
ENST00000543090.5
CDS CAA 90 bp AAGGCAAAGGTTCACATGATGCCTACCCCTGCCCAAGCCCCTTACTaGCAAGACTCTTACTTGCAGATGGCTCCGATGGTGAAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: KAKVHMMPTPAQAPY*QDSYLQMAPMVKPG
Trigger: TCCTGGCTTCACCATCGGAGCCATCTGCAAGTAAGAGTCTTGCAAGTAAGGGGCTTGGGCAGGGGTAGGCATCATGTGAACCTTTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546226.5
CDS GCA 72 bp TTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTTaGCACCACACTGTCCGTCTGTATGCGAGCAAGCAA +
Preference number: 6 (lower is better)
Translates to: FKLQARVRGFQC*HHTVRLYASKQ
Trigger: TTGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650307.1
CDS CCA 72 bp CCTCAGCACAGTCTGAGAGGGGACTACCTAGAAACCTaGGATGCACAGGAAGAAATGCCACAGTCCTCCTTT +
Preference number: 6 (lower is better)
Translates to: PQHSLRGDYLET*DAQEEMPQSSF
Trigger: AAAGGAGGACTGTGGCATTTCTTCCTGTGCATCCCAGGTTTCTAGGTAGTCCCCTCTCAGACTGTGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539045.1
CDS CCA 72 bp CTGGCTTGGAAGAAAGGAACTTCAGAACCTGGCCTGTaGCCAGCTGAGTCTCAGAGTGGGGAAATACTCCAA +
Preference number: 6 (lower is better)
Translates to: LAWKKGTSEPGL*PAESQSGEILQ
Trigger: TTGGAGTATTTCCCCACTCTGAGACTCAGCTGGCCACAGGCCAGGTTCTGAAGTTCCTTTCTTCCAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543543.5
CDS CAA 72 bp TTTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCTGTATGCGAGCAAGCT +
Preference number: 6 (lower is better)
Translates to: FQTAGQGTRLSM*PPHCPSVCEQA
Trigger: AGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000392841.1
ENST00000442944.7
ENST00000535253.5
ENST00000536185.5
ENST00000536813.6
ENST00000537841.5
ENST00000542345.5
ENST00000542729.5
ENST00000542822.5
ENST00000543543.5
ENST00000543821.5
ENST00000544360.5
ENST00000544387.5
ENST00000545621.5
ENST00000545901.5
ENST00000546226.5
ENST00000546302.6
ENST00000640813.1
ENST00000648026.1
ENST00000648374.1
ENST00000648488.1
ENST00000649823.1
ENST00000650101.1
ENST00000652429.1
CDS CAA 72 bp CGAATGAAAGGACCCCGTCTGTGTAGACGAACGTTCTaGGTCTGGGTCACTAAATCTAGAGCCGTGCATCCC +
Preference number: 6 (lower is better)
Translates to: RMKGPRLCRRTF*VWVTKSRAVHP
Trigger: GGGATGCACGGCTCTAGATTTAGTGACCCAGACCAAGAACGTTCGTCTACACAGACGGGGTCCTTTCATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649823.1
ENST00000650101.1
ENST00000650307.1
CDS CAA 72 bp TTTCAAACTGCAGGCCAGGGTACGAGGCTTTCAATGTaGCCACCACACTGTCCGTCTGTATGCGAGCAAGCA +
Preference number: 6 (lower is better)
Translates to: FQTAGQGTRLSM*PPHCPSVCEQA
Trigger: TGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650307.1
CDS CAA 90 bp CCACACTCTTCTCTGGCAGGGTTTCTAGGGTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCATCATGAGGGTTTTCCCGCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: PHSSLAGFLGSSQQI*GERQQHHEGFPAWG
Trigger: CCCCCAGGCGGGAAAACCCTCATGATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGACCCTAGAAACCCTGCCAGAGAAGAGTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546226.5
CDS CAA 90 bp GAGCAAGCTGGCTCTTGCGGGTACCCACGCGAATCACTCTCATCTTaGGGCTGTTTTCTTCCTAGGGTCACAGAGCTAATAACCGAAAGA +
Preference number: 6 (lower is better)
Translates to: EQAGSCGYPRESLSS*GCFLPRVTELITER
Trigger: TCTTTCGGTTATTAGCTCTGTGACCCTAGGAAGAAAACAGCCCAAAGATGAGAGTGATTCGCGTGGGTACCCGCAAGAGCCAGCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536813.6
ENST00000650101.1
CDS CAA 90 bp GTCCCCAGGTCACAGTCCCCTCTGTTTCTAGTGTTCCTCAACACCTaGTCCAAGAACCAGAATCACTGGCTTGGAAGAAAGGAACTTCAG +
Preference number: 6 (lower is better)
Translates to: VPRSQSPLFLVFLNT*SKNQNHWLGRKELQ
Trigger: CTGAAGTTCCTTTCTTCCAAGCCAGTGATTCTGGTTCTTGGACAAGGTGTTGAGGAACACTAGAAACAGAGGGGACTGTGACCTGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543543.5
CDS TCA 72 bp TCAGGGTGCAGGATAATAGGGTTACATCAATACTCCTaGACTCCAGATGCGGGAACTTTCTCTGCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: SGCRIIGLHQYS*TPDAGTFSAAG
Trigger: CCCAGCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTGATGTAACCCTATTATCCTGCACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648026.1
CDS GCA 72 bp TTCCACTCCTTTCCAGAAAACTCACTGATTTCAAACTaGAGGCCAGGGTACGAGGCTTTCAATGTTGCCACC +
Preference number: 6 (lower is better)
Translates to: FHSFPENSLISN*RPGYEAFNVAT
Trigger: GGTGGCAACATTGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGTGAGTTTTCTGGAAAGGAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535793.5
ENST00000542044.5
ENST00000542822.5
ENST00000545621.5
ENST00000545901.5
ENST00000650307.1
CDS CCA 72 bp GATGTTAAATGCCAGGCTAATCCAGGTAGTCAGAGCTaGAGGTATTCAGAGGAAAGCACCTTCAGAACTGGG +
Preference number: 6 (lower is better)
Translates to: DVKCQANPGSQS*RYSEESTFRTG
Trigger: CCCAGTTCTGAAGGTGCTTTCCTCTGAATACCTCCAGCTCTGACTACCTGGATTAGCCTGGCATTTAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542044.5
ENST00000545901.5
ENST00000650307.1
CDS CCA 72 bp GTGTTCCTCAACACCTTGTCCAAGAACCAGAATCACTaGCTTGGAAGAAAGGAACTTCAGAACCTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: VFLNTLSKNQNH*LGRKELQNLAC
Trigger: ACAGGCCAGGTTCTGAAGTTCCTTTCTTCCAAGCCAGTGATTCTGGTTCTTGGACAAGGTGTTGAGGAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543543.5
CDS CAA 90 bp CCACACTCTTCTCTGGCAGGGTTTCTAGGGTCTTCCCAACAAATTTaGGGTGAAAGACAACAGCATCATGAGGGTTTTCCCGCTCATTCT +
Preference number: 6 (lower is better)
Translates to: PHSSLAGFLGSSQQI*GERQQHHEGFPAHS
Trigger: AGAATGAGCGGGAAAACCCTCATGATGCTGTTGTCTTTCACCCAAAATTTGTTGGGAAGACCCTAGAAACCCTGCCAGAGAAGAGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546302.6
CDS CAA 90 bp ACAACCAGGTCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCTCCAATTGATTTCAAACTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: TTRSTSFFSRACSSS*VNRLFSPIDFKLQA
Trigger: GGCCTGCAGTTTGAAATCAATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGACCTGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536185.5
CDS TCA 72 bp TTCCCATTAGCTTCCACTCCTTTCCAGAAAACTCACTaGTTTCAAACTGCAGGCCAGGGTACGAGGCTTTCA +
Preference number: 6 (lower is better)
Translates to: FPLASTPFQKTH*FQTAGQGTRLS
Trigger: TGAAAGCCTCGTACCCTGGCCTGCAGTTTGAAATCAGTGAGTTTTCTGGAAAGGAGTGGAAGCTAATGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000535793.5
ENST00000542044.5
ENST00000542822.5
ENST00000545621.5
ENST00000545901.5
ENST00000650307.1
CDS TCA 72 bp CTATTCTCTCTCGATTGCCAACTCACTGGTATTTCTTaGGTTTTCTGCCACCAGTCAACACTCCTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: LFSLDCQLTGIS*VFCHQSTLLRA
Trigger: TGCCCTGAGGAGTGTTGACTGGTGGCAGAAAACTCAAGAAATACCAGTGAGTTGGCAATCGAGAGAGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546226.5
CDS TCA 72 bp TGTGAGGAAGGTAGTATTATTATCCCCAAATACTCCTaGACTCCAGATGCGGGAACTTTCTCTGCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: CEEGSIIIPKYS*TPDAGTFSAAG
Trigger: CCCAGCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGAGTATTTGGGGATAATAATACTACCTTCCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648488.1
CDS GCA 72 bp AACACAAAAAGAAGGCGCACTTCTAAGACGTTTGTGTaGAGTTCGGAGGCTTGGCTGATACTCTCTCCTATG +
Preference number: 6 (lower is better)
Translates to: NTKRRRTSKTFV*SSEAWLILSPM
Trigger: CATAGGAGAGAGTATCAGCCAAGCCTCCGAACTGCACACAAACGTCTTAGAAGTGCGCCTTCTTTTTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650101.1
ENST00000650307.1
CDS CCA 72 bp CGCACTTCTAAGACGTTTGTGTGCAGTTCGGAGGCTTaGCTGATACTCTCTCCTATGAATCAAAAGTGGAAC +
Preference number: 6 (lower is better)
Translates to: RTSKTFVCSSEA*LILSPMNQKWN
Trigger: GTTCCACTTTTGATTCATAGGAGAGAGTATCAGCCAAGCCTCCGAACTGCACACAAACGTCTTAGAAGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650101.1
ENST00000650307.1
CDS CAA 72 bp TCCCGCTCATTCTTCTCCAGGGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCTCCAATCTTAGAGAGT +
Preference number: 6 (lower is better)
Translates to: SRSFFSRACSSS*VNRLFSPILES
Trigger: ACTCTCTAAGATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAGCGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546302.6
CDS TCA 72 bp ACTGAGGAGAGAGTCAATCAATCAGGTGCTCATTATTaGTCAGCATTTACTGAGCCTAGCGCTGTGCTACGA +
Preference number: 6 (lower is better)
Translates to: TEERVNQSGAHY*SAFTEPSAVLR
Trigger: TCGTAGCACAGCGCTAGGCTCAGTAAATGCTGATCAATAATGAGCACCTGATTGATTGACTCTCTCCTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542044.5
ENST00000650307.1
CDS GCA 72 bp ATCTTTGGGCTGTTTTCTTCTTCTAAGACGTTTGTGTaGAGTTCGGAGGCTTGGCTGATACTCTCTCCTATG +
Preference number: 6 (lower is better)
Translates to: IFGLFSSSKTFV*SSEAWLILSPM
Trigger: CATAGGAGAGAGTATCAGCCAAGCCTCCGAACTGCACACAAACGTCTTAGAAGAAGAAAACAGCCCAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649823.1
CDS TCA 72 bp ATCAAGAATCTTGTCCCCTGTGGTGGACATAGCAACTaGGGAGAGAGTCAATCAATCAGGTGCTCATTATTG +
Preference number: 6 (lower is better)
Translates to: IKNLVPCGGHSN*GESQSIRCSLL
Trigger: CAATAATGAGCACCTGATTGATTGACTCTCTCCTCAGTTGCTATGTCCACCACAGGGGACAAGATTCTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542044.5
ENST00000650307.1
CDS CCA 72 bp CAGATCACCTCTATTCTCTCTCGATTGCCAACTCACTaGTATTTCTTGAGTTTTCTGCCACCAGTCAACACT +
Preference number: 6 (lower is better)
Translates to: QITSILSRLPTH*YFLSFLPPVNT
Trigger: AGTGTTGACTGGTGGCAGAAAACTCAAGAAATACCAGTGAGTTGGCAATCGAGAGAGAATAGAGGTGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546226.5
CDS CCA 72 bp TCTTCTTCTAAGACGTTTGTGTGCAGTTCGGAGGCTTaGCTGATACTCTCTCCTATGAATCAAAAGTGGAAC +
Preference number: 6 (lower is better)
Translates to: SSSKTFVCSSEA*LILSPMNQKWN
Trigger: GTTCCACTTTTGATTCATAGGAGAGAGTATCAGCCAAGCCTCCGAACTGCACACAAACGTCTTAGAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649823.1
CDS CAA 72 bp TCCACTTCATTCTTCTCCAGGGCATGTTCAAGCTCCTaGGTAAACAGGCTTTTCTCTCCAATTGATTTCAAA +
Preference number: 6 (lower is better)
Translates to: STSFFSRACSSS*VNRLFSPIDFK
Trigger: TTTGAAATCAATTGGAGAGAAAAGCCTGTTTACCAAGGAGCTTGAACATGCCCTGGAGAAGAATGAAGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536185.5
CDS GCA 72 bp GAAAATGCATTTAATACACCTAGCCTACCTTACATGTaGTCAGAACACTTAAGATTAGCCTATTATAGTTGG +
Preference number: 6 (lower is better)
Translates to: ENAFNTPSLPYM*SEHLRLAYYSW
Trigger: CCAACTATAATAGGCTAATCTTAAGTGTTCTGAGCACATGTAAGGTAGGCTAGGTGTATTAAATGCATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544182.1
CDS CCA 72 bp ATGTGCTCAGAACACTTAAGATTAGCCTATTATAGTTaGACAAAATCATCTGACACCAAGCCTGTTTTACAA +
Preference number: 6 (lower is better)
Translates to: MCSEHLRLAYYS*TKSSDTKPVLQ
Trigger: TTGTAAAACAGGCTTGGTGTCAGATGATTTTGTCCAACTATAATAGGCTAATCTTAAGTGTTCTGAGCACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544182.1