Pregenerated sensors for HLA-DQA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000196735, ENSG00000206305, ENSG00000225890, ENSG00000228284, ENSG00000232062, ENSG00000236418Ensembl transcript IDs: ENST00000414549.1, ENST00000422863.1, ENST00000445944.1, ENST00000448163.1, ENST00000460633.1, ENST00000461508.5, ENST00000468299.5, ENST00000474698.5, ENST00000476192.5, ENST00000482745.5, ENST00000484643.5, ENST00000497426.5
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATGTGGCTTTACAGTCTGGAGGGTCCCCTGCACTGCCCACATTGTaGCTAATGGATGAGCTGAGCCTGACCAGGGCACTCTGGTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: HVALQSGGSPALPTL*LMDELSLTRALWCE Trigger: CTCACACCAGAGTGCCCTGGTCAGGCTCAGCTCATCCATTAGGCACAATGTGGGCAGTGCAGGGGACCCTCCAGACTGTAAAGCCACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| 3UTR GCA 90 bp | CATGTGGCTTTACAGTATGGAGGGTCCCCTGCACTGCCCACATTGTaGCTAATGAATGAGCCAAGCCTGACCAGGGCACTCTGGTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: HVALQYGGSPALPTL*LMNEPSLTRALWCE Trigger: CTCACACCAGAGTGCCCTGGTCAGGCTTGGCTCATTCATTAGGCACAATGTGGGCAGTGCAGGGGACCCTCCATACTGTAAAGCCACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTGGAGGGTCCCCTGCACTGCCCACATTGTGCCTAATGGATGAGCTGAGCCGCTGCTGTAGATGGTaGTGCACCTTCCTTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: QSGGSPALPTLCLMDELSRCCRW*CTFLFR Trigger: CCTGAAAAGGAAGGTGCATCACCATCTACAGCAGCG...GCTCAGCTCATCCATTAGGCACAATGTGGGCAGTGCAGGGGACCCTCCAGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| 3UTR-3UTR TCA 90 bp | GGATGCGTTCTGACATGTGAGCCCCAAGCACTCTTGCTTGTGTGGACGCCTTCCCGCTGCTGTAGATGGTaGTGCACCTTCTTTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GCVLTCEPQALLLVWTPSRCCRW*CTFFFR Trigger: CCTGAAAAAGAAGGTGCATCACCATCTACAGCAGCG...GGAAGGCGTCCACACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| 3UTR-3UTR TCA 90 bp | TCCCATACTGTTTCCATCACTAGTCTGAGCACCCTCTGCAGGGGAGACAGCATGGGTCAGGATCAGCCATaGTCAGGGATGCGTTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: SHTVSITSLSTLCRGDSMGQDQP*SGMRSD Trigger: GTCAGAACGCATCCCTGATCATGGCTGATCCTGACC...CATGCTGTCTCCCCTGCAGAGGGTGCTCAGACTAGTGATGGAAACAGTATGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| 3UTR-3UTR TCA 90 bp | TCCCATACTGTTTCCATCACTAGTCTGAGCACCCTCTGCAGGGGAGACAGCATGCGCTGCTGTAGATGGTaGTGCACCTTCTTTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SHTVSITSLSTLCRGDSMRCCRW*CTFFFR Trigger: CCTGAAAAAGAAGGTGCATCACCATCTACAGCAGCG...CATGCTGTCTCCCCTGCAGAGGGTGCTCAGACTAGTGATGGAAACAGTATGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| 3UTR GCA 72 bp | TTACAGTCTGGAGGGTCCCCTGCACTGCCCACATTGTaGCTAATGGATGAGCTGAGCCTGACCAGGGCACTC | + |
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Preference number: 3 (lower is better) Translates to: LQSGGSPALPTL*LMDELSLTRAL Trigger: GAGTGCCCTGGTCAGGCTCAGCTCATCCATTAGGCACAATGTGGGCAGTGCAGGGGACCCTCCAGACTGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| 3UTR-3UTR CAA 90 bp | TCCCATACTGTTTCCATCACTAGTCTGAGCACCCTCTGCAGGGGAGACAGCATGGAGCCCCAAGCACTCTaGCTTGTGTGGACGCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: SHTVSITSLSTLCRGDSMEPQAL*LVWTPS Trigger: GGAAGGCGTCCACACAAGCAAGAGTGCTTGGGGCTC...CATGCTGTCTCCCCTGCAGAGGGTGCTCAGACTAGTGATGGAAACAGTATGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| 3UTR TCA 72 bp | CGAAGGCCAGGATCAGCCATGATCAGGGTTGCGTTCTaGCATGTGAGCCCCAAGCACTCTTGCTTGTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: RRPGSAMIRVAF*HVSPKHSCLCG Trigger: TCCACACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCAACCCTGATCATGGCTGATCCTGGCCTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| 3UTR GCA 72 bp | TTACAGTATGGAGGGTCCCCTGCACTGCCCACATTGTaGCTAATGAATGAGCCAAGCCTGACCAGGGCACTC | + |
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Preference number: 3 (lower is better) Translates to: LQYGGSPALPTL*LMNEPSLTRAL Trigger: GAGTGCCCTGGTCAGGCTTGGCTCATTCATTAGGCACAATGTGGGCAGTGCAGGGGACCCTCCATACTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| 3UTR TCA 72 bp | CGAAGGTCAGGATCAGCCATGATCAGGGATGCGTTCTaGCATGTGAGCCCCAAGCACTCTTGCTTGTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RRSGSAMIRDAF*HVSPKHSCLCG Trigger: TCCACACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCATCCCTGATCATGGCTGATCCTGACCTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| 3UTR TCA 72 bp | CGAAGGCCAGGATCAGTCATGACCAAGGCTGCATTCTaGCATGTGAGCCCCGAGCATTCTTGCTTGTATGGG | + |
|
Preference number: 3 (lower is better) Translates to: RRPGSVMTKAAF*HVSPEHSCLYG Trigger: CCCATACAAGCAAGAATGCTCGGGGCTCACATGTCAGAATGCAGCCTTGGTCATGACTGATCCTGGCCTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| 3UTR-3UTR CAA 90 bp | TTCATCTTTGAATCCTTAAAACTTAGCTCACTGGGTGCTCAAACATGTGTATTGGAGCCCCAAGCACTCTaGCTTGTGTGGACGCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: FIFESLKLSSLGAQTCVLEPQAL*LVWTPS Trigger: GGAAGGCGTCCACACAAGCAAGAGTGCTTGGGGCTC...CAATACACATGTTTGAGCACCCAGTGAGCTAAGTTTTAAGGATTCAAAGATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000461508.5 ENST00000468299.5 ENST00000484643.5 |
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| 3UTR CCA 72 bp | AAAGGAGTTAAAACCTTCTCATGTGGCTTTACAGTATaGAGGGTCCCCTGCACTGCCCACATTGTGCCTAAT | + |
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Preference number: 3 (lower is better) Translates to: KGVKTFSCGFTV*RVPCTAHIVPN Trigger: ATTAGGCACAATGTGGGCAGTGCAGGGGACCCTCCATACTGTAAAGCCACATGAGAAGGTTTTAACTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| 3UTR CCA 72 bp | AAAGGAGTTAAAACATTCTCATGTGGCTTTACAGTCTaGAGGGTCCCCTGCACTGCCCACATTGTGCCTAAT | + |
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Preference number: 3 (lower is better) Translates to: KGVKTFSCGFTV*RVPCTAHIVPN Trigger: ATTAGGCACAATGTGGGCAGTGCAGGGGACCCTCCAGACTGTAAAGCCACATGAGAATGTTTTAACTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| 3UTR CAA 72 bp | GCTTTACAGTCTGGAGGGTCCCCTGCACTGCCCACATaGTGCCTAATGGATGAGCTGAGCCTGACCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ALQSGGSPALPT*CLMDELSLTRA Trigger: TGCCCTGGTCAGGCTCAGCTCATCCATTAGGCACAATGTGGGCAGTGCAGGGGACCCTCCAGACTGTAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| CDS-3UTR GCA 90 bp | GGATGCGTTCTGACATGTGAGCCCCAAGCACTCTTGCTTGTGTGGACGCCTTCCGTATGGAGGTTCCCCTaGACTGCCCACATTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCVLTCEPQALLLVWTPSVWRFP*TAHIVP Trigger: AGGCACAATGTGGGCAGTGCAGGGGAACCTCCATAC...GGAAGGCGTCCACACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| 3UTR CAA 72 bp | GCTTTACAGTATGGAGGGTCCCCTGCACTGCCCACATaGTGCCTAATGAATGAGCCAAGCCTGACCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALQYGGSPALPT*CLMNEPSLTRA Trigger: TGCCCTGGTCAGGCTTGGCTCATTCATTAGGCACAATGTGGGCAGTGCAGGGGACCCTCCATACTGTAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS-3UTR TCA 90 bp | AGCCATGATCAGGGATGCGTTCTGACATGTGAGCCCCAAGCACTCTTGCTTGTGGGTCAGGATCAGCCATaGTCAGGGATGCGTTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: SHDQGCVLTCEPQALLLVGQDQP*SGMRSD Trigger: GTCAGAACGCATCCCTGATCATGGCTGATCCTGACC...CACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCATCCCTGATCATGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR TCA 90 bp | AGCCATGATCAGGGATGCGTTCTGACATGTGAGCCCCAAGCACTCTTGCTTGTGTTTCCATCACTAGTCTaGGCACCCTCTGCAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SHDQGCVLTCEPQALLLVFPSLV*APSAGE Trigger: CTCCCCTGCAGAGGGTGCTCAGACTAGTGATGGAAA...CACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCATCCCTGATCATGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR GCA 90 bp | TCCCATACTGTTTCCATCACTAGTCTGAGCACCCTCTGCAGGGGAGACAGCATGGTATGGAGGTTCCCCTaGACTGCCCACATTGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SHTVSITSLSTLCRGDSMVWRFP*TAHIVP Trigger: AGGCACAATGTGGGCAGTGCAGGGGAACCTCCATAC...CATGCTGTCTCCCCTGCAGAGGGTGCTCAGACTAGTGATGGAAACAGTATGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR CCA 90 bp | GGATGCGTTCTGACATGTGAGCCCCAAGCACTCTTGCTTGTGTGGACGCCTTCCGCAGGGAGTCAGAGATaGATCCCACAATGTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: GCVLTCEPQALLLVWTPSAGSQR*IPQCLH Trigger: GTGAAGACATTGTGGGATCCATCTCTGACTCCCTGC...GGAAGGCGTCCACACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR CCA 90 bp | TATGGAGGGTCCCCTGCACTGCCCACATTGTGCCTAATGAATGAGCCAAGCCTGCCACAAGAGGCAACGTaGTCAGCTTCTTCCCTATCC | + |
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Preference number: 4 (lower is better) Translates to: YGGSPALPTLCLMNEPSLPQEAT*SASSLS Trigger: GGATAGGGAAGAAGCTGACCACGTTGCCTCTTGTGG...CAGGCTTGGCTCATTCATTAGGCACAATGTGGGCAGTGCAGGGGACCCTCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS-3UTR TCA 90 bp | AACCTTCTCATGTGGCTTTACAGTATGGAGGGTCCCCTGCACTGCCCACATTGTAACCTCCAAATTTGCTaGACTCAGGCCACCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NLLMWLYSMEGPLHCPHCNLQIC*TQATAR Trigger: CCTGGCGGTGGCCTGAGTTCAGCAAATTTGGAGGTT...ACAATGTGGGCAGTGCAGGGGACCCTCCATACTGTAAAGCCACATGAGAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS-3UTR TCA 90 bp | GGATGCGTTCTGACATGTGAGCCCCAAGCACTCTTGCTTGTGTGGACGCCTTCCGCAGGGGAGACAGCATaGCTTTTCATCTTTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: GCVLTCEPQALLLVWTPSAGETA*LFIFES Trigger: GGATTCAAAGATGAAAAGTCATGCTGTCTCCCCTGC...GGAAGGCGTCCACACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR TCA 90 bp | AACCTTCTCATGTGGCTTTACAGTATGGAGGGTCCCCTGCACTGCCCACATTGTGGCCAGGATCAGTCATaGCCAAGGCTGCATTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: NLLMWLYSMEGPLHCPHCGQDQS*PRLHSD Trigger: GTCAGAATGCAGCCTTGGTCATGACTGATCCTGGCC...ACAATGTGGGCAGTGCAGGGGACCCTCCATACTGTAAAGCCACATGAGAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS-3UTR GCA 90 bp | AGCCATGATCAGGGATGCGTTCTGACATGTGAGCCCCAAGCACTCTTGCTTGTGGCACTGCCCACATTGTaGCTAATGGATGAGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SHDQGCVLTCEPQALLLVALPTL*LMDELS Trigger: GCTCAGCTCATCCATTAGGCACAATGTGGGCAGTGC...CACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCATCCCTGATCATGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR CCA 90 bp | AAGGCCAGGATCAGTCATGACCAAGGCTGCATTCTGACATGTGAGCCCCGAGCAGCAGGGAGTCAGAGATaGATCCCACAATGTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: KARISHDQGCILTCEPRAAGSQR*IPQCLH Trigger: GTGAAGACATTGTGGGATCCATCTCTGACTCCCTGC...TGCTCGGGGCTCACATGTCAGAATGCAGCCTTGGTCATGACTGATCCTGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS-3UTR CCA 90 bp | TCCCATACTGTTTCCATCACTAGTCTGAGCACCCTCTGCAGGGGAGACAGCATGGCAGGGAGTCAGAGATaGATCCCACAATGTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: SHTVSITSLSTLCRGDSMAGSQR*IPQCLH Trigger: GTGAAGACATTGTGGGATCCATCTCTGACTCCCTGC...CATGCTGTCTCCCCTGCAGAGGGTGCTCAGACTAGTGATGGAAACAGTATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR TCA 90 bp | AGCCATGATCAGGGATGCGTTCTGACATGTGAGCCCCAAGCACTCTTGCTTGTGGCAGGGGAGACAGCATaGCTTTTCATCTTTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: SHDQGCVLTCEPQALLLVAGETA*LFIFES Trigger: GGATTCAAAGATGAAAAGTCATGCTGTCTCCCCTGC...CACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCATCCCTGATCATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR TCA 90 bp | AACCTTCTCATGTGGCTTTACAGTATGGAGGGTCCCCTGCACTGCCCACATTGTTTTCCATCACTAATCTaGGCACCCTCTGCAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: NLLMWLYSMEGPLHCPHCFPSLI*APSAGK Trigger: CTTCCCTGCAGAGGGTGCTCAGATTAGTGATGGAAA...ACAATGTGGGCAGTGCAGGGGACCCTCCATACTGTAAAGCCACATGAGAAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS-3UTR GCA 90 bp | GGATGCGTTCTGACATGTGAGCCCCAAGCACTCTTGCTTGTGTGGACGCCTTCCAGCGATGTTTGTCAGTaGAAATTGCGGGTCAAATCT | + |
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Preference number: 4 (lower is better) Translates to: GCVLTCEPQALLLVWTPSSDVCQ*KLRVKS Trigger: AGATTTGACCCGCAATTTGCACTGACAAACATCGCT...GGAAGGCGTCCACACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR GCA 90 bp | AACCTTCTCATGTGGCTTTACAGTATGGAGGGTCCCCTGCACTGCCCACATTGTGCACTGCCCACATTGTaGCTAATGAATGAGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: NLLMWLYSMEGPLHCPHCALPTL*LMNEPS Trigger: GCTTGGCTCATTCATTAGGCACAATGTGGGCAGTGC...ACAATGTGGGCAGTGCAGGGGACCCTCCATACTGTAAAGCCACATGAGAAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS-3UTR GCA 90 bp | AACCTTCTCATGTGGCTTTACAGTATGGAGGGTCCCCTGCACTGCCCACATTGTGGCCTTCTGCTTTCCTaGACCCCATACTGTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: NLLMWLYSMEGPLHCPHCGLLLS*TPYCFH Trigger: ATGGAAACAGTATGGGGTGCAGGAAAGCAGAAGGCC...ACAATGTGGGCAGTGCAGGGGACCCTCCATACTGTAAAGCCACATGAGAAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| 3UTR CAA 72 bp | CAGGGATGCGTTCTGACATGTGAGCCCCAAGCACTCTaGCTTGTGTGGACGCCTTCCTCCATAAAAATATGG | + |
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Preference number: 4 (lower is better) Translates to: QGCVLTCEPQAL*LVWTPSSIKIW Trigger: CCATATTTTTATGGAGGAAGGCGTCCACACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCATCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| 3UTR CAA 72 bp | CAGGGTTGCGTTCTGACATGTGAGCCCCAAGCACTCTaGCTTGTGTGGACGCCTTCCTCCATAAAAATATGG | + |
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Preference number: 4 (lower is better) Translates to: QGCVLTCEPQAL*LVWTPSSIKIW Trigger: CCATATTTTTATGGAGGAAGGCGTCCACACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCAACCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| CDS-3UTR CCA 90 bp | AACCTTCTCATGTGGCTTTACAGTATGGAGGGTCCCCTGCACTGCCCACATTGTGCATTCTTGCTTGTATaGGCCTCTTCCTCCACAAAA | + |
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Preference number: 4 (lower is better) Translates to: NLLMWLYSMEGPLHCPHCAFLLV*ASSSTK Trigger: TTTTGTGGAGGAAGAGGCCCATACAAGCAAGAATGC...ACAATGTGGGCAGTGCAGGGGACCCTCCATACTGTAAAGCCACATGAGAAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS-3UTR GCA 90 bp | CCAAGCACTCTTGCTTGTGTGGACGCCTTCCTCCATAAAAATATGGAAAATTATAGTCTGAGCACCCTCTaGAGGGGAGACAGCATGACT | + |
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Preference number: 4 (lower is better) Translates to: PSTLACVDAFLHKNMENYSLSTL*RGDSMT Trigger: AGTCATGCTGTCTCCCCTGCAGAGGGTGCTCAGACT...ATAATTTTCCATATTTTTATGGAGGAAGGCGTCCACACAAGCAAGAGTGCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR TCA 90 bp | AACCTTCTCATGTGGCTTTACAGTATGGAGGGTCCCCTGCACTGCCCACATTGTAACATGTGTATTGAATaGCAGTTGCTATATTCGAGG | + |
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Preference number: 4 (lower is better) Translates to: NLLMWLYSMEGPLHCPHCNMCIE*QLLYSR Trigger: CCTCGAATATAGCAACTGTCATTCAATACACATGTT...ACAATGTGGGCAGTGCAGGGGACCCTCCATACTGTAAAGCCACATGAGAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS-3UTR TCA 90 bp | GCACTCTTGCTTGTGTGGACGCCTTCCTCCATAAAAATATGGAAAACTATATTTATCAGGGTTGCGTTCTaGCATGTGAGCCCCAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: ALLLVWTPSSIKIWKTIFIRVAF*HVSPKH Trigger: GTGCTTGGGGCTCACATGTCAGAACGCAACCCTGAT...AAATATAGTTTTCCATATTTTTATGGAGGAAGGCGTCCACACAAGCAAGAGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| CDS-3UTR GCA 90 bp | CCAAGCACTCTTGCTTGTGTGGACGCCTTCCTCCATAAAAATATGGAAAATTATGCACTGCCCACATTGTaGCTAATGGATGAGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PSTLACVDAFLHKNMENYALPTL*LMDELS Trigger: GCTCAGCTCATCCATTAGGCACAATGTGGGCAGTGC...ATAATTTTCCATATTTTTATGGAGGAAGGCGTCCACACAAGCAAGAGTGCTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR GCA 90 bp | AACCTTCTCATGTGGCTTTACAGTATGGAGGGTCCCCTGCACTGCCCACATTGTGTATTGAATGACAGTTaGTATATTCGAGGACCACAT | + |
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Preference number: 4 (lower is better) Translates to: NLLMWLYSMEGPLHCPHCVLNDS*YIRGPH Trigger: ATGTGGTCCTCGAATATAGCAACTGTCATTCAATAC...ACAATGTGGGCAGTGCAGGGGACCCTCCATACTGTAAAGCCACATGAGAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS-3UTR TCA 90 bp | TTCATCTTTGAATCCTTAAAACTTAGCTCACTGGGTGCTCAAACATGTGTATTGGGTCAGGATCAGCCATaGTCAGGGATGCGTTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: FIFESLKLSSLGAQTCVLGQDQP*SGMRSD Trigger: GTCAGAACGCATCCCTGATCATGGCTGATCCTGACC...CAATACACATGTTTGAGCACCCAGTGAGCTAAGTTTTAAGGATTCAAAGATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR GCA 90 bp | TTCATCTTTGAATCCTTAAAACTTAGCTCACTGGGTGCTCAAACATGTGTATTGAGTCTGAGCACCCTCTaGAGGGGAGACAGCATGACT | + |
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Preference number: 4 (lower is better) Translates to: FIFESLKLSSLGAQTCVLSLSTL*RGDSMT Trigger: AGTCATGCTGTCTCCCCTGCAGAGGGTGCTCAGACT...CAATACACATGTTTGAGCACCCAGTGAGCTAAGTTTTAAGGATTCAAAGATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR TCA 90 bp | TTCATCTTTGAATCCTTAAAACTTAGCTCACTGGGTGCTCAAACATGTGTATTGCGCTGCTGTAGATGGTaGTGCACCTTCCTTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: FIFESLKLSSLGAQTCVLRCCRW*CTFLFR Trigger: CCTGAAAAGGAAGGTGCATCACCATCTACAGCAGCG...CAATACACATGTTTGAGCACCCAGTGAGCTAAGTTTTAAGGATTCAAAGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| CDS-3UTR GCA 90 bp | TTCATCTTTGAATCCTTAAAACTTAGCTCACTGGGTGCTCAAACATGTGTATTGAGCCATGATCAGGGTTaGGTTCTGACATGTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FIFESLKLSSLGAQTCVLSHDQG*VLTCEP Trigger: GGGCTCACATGTCAGAACGCAACCCTGATCATGGCT...CAATACACATGTTTGAGCACCCAGTGAGCTAAGTTTTAAGGATTCAAAGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| CDS-3UTR GCA 90 bp | TTCATCTTTGAATCCTTAAAACTTAGCTCACTGGGTGCTCAAACATGTGTATTGAGTCTGAGCACCCTTTaGAGAGGAGACAGCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: FIFESLKLSSLGAQTCVLSLSTL*RGDSMT Trigger: AGTCATGCTGTCTCCTCTGCAAAGGGTGCTCAGACT...CAATACACATGTTTGAGCACCCAGTGAGCTAAGTTTTAAGGATTCAAAGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| CDS-3UTR CCA 90 bp | TTCATCTTTGAATCCTTAAAACTTAGCTCACTGGGTGCTCAAACATGTGTATTGGCAGGGAGTCAGAGATaGATCCCACAATGTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FIFESLKLSSLGAQTCVLAGSQR*IPQCLH Trigger: GTGAAGACATTGTGGGATCCATCTCTGACTCCCTGC...CAATACACATGTTTGAGCACCCAGTGAGCTAAGTTTTAAGGATTCAAAGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461508.5 ENST00000468299.5 ENST00000484643.5 |
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| CDS-3UTR TCA 90 bp | TTCATCTTTGAATCCTTAAAACTTAGCTCACTGGGTGCTCAAACATGTGTATTGGCAGAGGAGACAGCATaGCTTTTCATCTTTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: FIFESLKLSSLGAQTCVLAEETA*LFIFES Trigger: GGATTCAAAGATGAAAAGTCATGCTGTCTCCTCTGC...CAATACACATGTTTGAGCACCCAGTGAGCTAAGTTTTAAGGATTCAAAGATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| CDS-3UTR GCA 90 bp | GCACTCTTGCTTGTGTGGACGCCTTCCTCCATAAAAATATGGAAAACTATATTTAGCGATGTTTGTCAGTaGAAATTGCGGGTCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLVWTPSSIKIWKTIFSDVCQ*KLRVKS Trigger: AGATTTGACCCGCAATTTGCACTGACAAACATCGCT...AAATATAGTTTTCCATATTTTTATGGAGGAAGGCGTCCACACAAGCAAGAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| CDS-3UTR GCA 90 bp | TTCATCTTTGAATCCTTAAAACTTAGCTCACTGGGTGCTCAAACATGTGTATTGAGCGATGTTTGTCAGTaGAAATTGCGGGTCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FIFESLKLSSLGAQTCVLSDVCQ*KLRVKS Trigger: AGATTTGACCCGCAATTTGCACTGACAAACATCGCT...CAATACACATGTTTGAGCACCCAGTGAGCTAAGTTTTAAGGATTCAAAGATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461508.5 ENST00000468299.5 ENST00000484643.5 |
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| CDS CCA 90 bp | CCGCAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTTaGGCACACCTCCCAGACGGGGCGGTGGCCGGGCAGAGGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQSRHCHPGPFSMSC*AHLPDGAVAGQRGS Trigger: GGAGCCCCTCTGCCCGGCCACCGCCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
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| CDS CCA 90 bp | ACCCCCGGGCCATGGACCAGTACCAGTTGGTGGCCTGTTAGAAACTaGACCACGCAGTGGGTGAGCCAGCATTACCAACTGAGCCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPGPWTSTSWWPVRN*TTQWVSQHYQLSPA Trigger: GGCGGGGCTCAGTTGGTAATGCTGGCTCACCCACTGCGTGGTCCAGTTTCTAACAGGCCACCAACTGGTACTGGTCCATGGCCCGGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000460633.1 |
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| CDS TCA 90 bp | TGTTGCCTAGGCTGGAGCGAGCACAGTGGCACAATCCTAGCCCTCTaGAGCCCTGAACTCCTGGGTTCGCTCCTCTCGCCTCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CCLGWSEHSGTILAL*SPELLGSLLSPQPP Trigger: TGGAGGCTGAGGCGAGAGGAGCGAACCCAGGAGTTCAGGGCTTCAGAGGGCTAGGATTGTGCCACTGTGCTCGCTCCAGCCTAGGCAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474698.5 |
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| CDS TCA 90 bp | AGGCTGGAGCGAGCACAGTGGCACAATCCTAGCCTTCTGAAGCCCTaGACTCCTGGGTTCGCTCCTCTCGCCTCAGCCTCCAGAGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLERAQWHNPSLLKP*TPGFAPLASASRVA Trigger: AGCTACTCTGGAGGCTGAGGCGAGAGGAGCGAACCCAGGAGTTCAGGGCTTCAGAAGGCTAGGATTGTGCCACTGTGCTCGCTCCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
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| CDS TCA 90 bp | TGTTGCCTAGGCTGGAGCGAGCACAGTGGCACAATCCTAGCCTTCTaGAGCCCTGAACTCCTGGGTTCGCTCCTCTCGCCTCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CCLGWSEHSGTILAF*SPELLGSLLSPQPP Trigger: TGGAGGCTGAGGCGAGAGGAGCGAACCCAGGAGTTCAGGGCTTCAGAAGGCTAGGATTGTGCCACTGTGCTCGCTCCAGCCTAGGCAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
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| CDS-3UTR CAA 90 bp | CAGTCTGGAGGGTCCCCTGCACTGCCCACATTGTGCCTAATGGATGAGCTGAGCGAGCCCCAAGCACTCTaGCTTGTGTGGACGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSGGSPALPTLCLMDELSEPQAL*LVWTPS Trigger: GGAAGGCGTCCACACAAGCAAGAGTGCTTGGGGCTC...GCTCAGCTCATCCATTAGGCACAATGTGGGCAGTGCAGGGGACCCTCCAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484643.5 |
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| CDS CCA 90 bp | TGGACCAGTACCAGTTGGTGGCCTGTTAGAAACTGGACCACGCAGTaGGTGAGCCAGCATTACCAACTGAGCCCCGCCTTCCGTCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: WTSTSWWPVRNWTTQ*VSQHYQLSPAFRQI Trigger: GATCTGACGGAAGGCGGGGCTCAGTTGGTAATGCTGGCTCACCCACTGCGTGGTCCAGTTTCTAACAGGCCACCAACTGGTACTGGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460633.1 |
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| CDS-3UTR CAA 90 bp | AGCCATGATCAGGGATGCGTTCTGACATGTGAGCCCCAAGCACTCTTGCTTGTGGAGCCCCAAGCACTCTaGCTTGTGTGGACGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHDQGCVLTCEPQALLLVEPQAL*LVWTPS Trigger: GGAAGGCGTCCACACAAGCAAGAGTGCTTGGGGCTC...CACAAGCAAGAGTGCTTGGGGCTCACATGTCAGAACGCATCCCTGATCATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS GCA 90 bp | CATGTGGCTTTACAGTATGGAGGTTCCCCTGCACTGCCCACATTGTaGCTAATGGATGAGCTGAGCCTGACCAGGGCACTCTGGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HVALQYGGSPALPTL*LMDELSLTRALWCE Trigger: CTCACACCAGAGTGCCCTGGTCAGGCTCAGCTCATCCATTAGGCACAATGTGGGCAGTGCAGGGGAACCTCCATACTGTAAAGCCACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS-3UTR CAA 90 bp | AAGGCCAGGATCAGTCATGACCAAGGCTGCATTCTGACATGTGAGCCCCGAGCACTTGGGTGCCAAATTTaGCTAGAGGACGTCACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KARISHDQGCILTCEPRALGCQI*LEDVTL Trigger: CAGGGTGACGTCCTCTAGCAAAATTTGGCACCCAAG...TGCTCGGGGCTCACATGTCAGAATGCAGCCTTGGTCATGACTGATCCTGGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS-3UTR CAA 90 bp | AAGGCCAGGATCAGTCATGACCAAGGCTGCATTCTGACATGTGAGCCCCGAGCATCAAAACCTCCAAATTaGCTGAACTCAGGCCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: KARISHDQGCILTCEPRASKPPN*LNSGHR Trigger: GCGGTGGCCTGAGTTCAGCAAATTTGGAGGTTTTGA...TGCTCGGGGCTCACATGTCAGAATGCAGCCTTGGTCATGACTGATCCTGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS TCA 90 bp | CTGTTAGAAACTGGACCATGCAGTGGACGAGGTAGCATTACCAACTaGGCCCCGCCTTCCGTCAGATCAGTGGTGGCATTAGATTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLETGPCSGRGSITN*APPSVRSVVALDSH Trigger: ATGAGAATCTAATGCCACCACTGATCTGACGGAAGGCGGGGCTCAGTTGGTAATGCTACCTCGTCCACTGCATGGTCCAGTTTCTAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS-3UTR CAA 90 bp | AAGGCCAGGATCAGTCATGACCAAGGCTGCATTCTGACATGTGAGCCCCGAGCATGTTCAAGTTGTGTTTaGCCACAGCCATGTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KARISHDQGCILTCEPRACSSCV*PQPCFS Trigger: TGAGAAACATGGCTGTGGCAAAACACAACTTGAACA...TGCTCGGGGCTCACATGTCAGAATGCAGCCTTGGTCATGACTGATCCTGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482745.5 |
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| CDS TCA 90 bp | AGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTaGTTGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RCWRGCGEIGTLLHC*LDCKLVQPLWKSVW Trigger: CCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCAATCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS GCA 90 bp | GGAGCGCGAACCCTATTGTTAACTGTGCATGCAAAAGATCTAGGTTaGATGTTCCTTATGAGAACCTTGCTAATGCTTTTTGATCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GARTLLLTVHAKDLG*MFLMRTLLMLFDLR Trigger: CCTCAGATCAAAAAGCATTAGCAAGGTTCTCATAAGGAACATGCAACCTAGATCTTTTGCATGCACAGTTAACAATAGGGTTCGCGCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS CCA 90 bp | TGCATGTTCCTTATGAGAACCTTGCTAATGCTTTTTGATCTGAGGTaGAACAGTTTCACAGTTTCATCCCCAAATCATACCCACATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CMFLMRTLLMLFDLR*NSFTVSSPNHTHIP Trigger: GGGAATGTGGGTATGATTTGGGGATGAAACTGTGAAACTGTTCCACCTCAGATCAAAAAGCATTAGCAAGGTTCTCATAAGGAACATGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS TCA 90 bp | GCTCATCACCACTGGCCATCAGAGAAATGCAAATCAAAAGCACAATaGGATACCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AHHHWPSEKCKSKAQ*DTISHQLEWQSLKS Trigger: ACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTGTGCTTTTGATTTGCATTTCTCTGATGGCCAGTGGTGATGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS GCA 90 bp | AGTTGTTTATCTAGTAGAAGTTTCCATATTCTGGATCTTGTTGGTTaGATCCCTGTGATGTCATTCACTGTGGGATTTGTTAGTTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SCLSSRSFHILDLVG*IPVMSFTVGFVSWT Trigger: AGTCCAACTAACAAATCCCACAGTGAATGACATCACAGGGATGCAACCAACAAGATCCAGAATATGGAAACTTCTACTAGATAAACAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460633.1 |
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| CDS GCA 90 bp | CATTGTCTCACTCTTGGTGTTGTACATTCTGTGGATTTGGGCAAATaGATAATGACATTTTTCAACATCGTGGTATCAAATAGAGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HCLTLGVVHSVDLGK*IMTFFNIVVSNRVV Trigger: AACTACTCTATTTGATACCACGATGTTGAAAAATGTCATTATGCATTTGCCCAAATCCACAGAATGTACAACACCAAGAGTGAGACAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
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| CDS CCA 90 bp | TTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTaGCTCTCTGTTTGTCTGTTATTGGTGTATAAGAATGCTTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FILFEAIVNGSSLMI*LSVCLLLVYKNACD Trigger: ATCACAAGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474698.5 |
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| CDS CAA 90 bp | TCCGCAAAGCCGCCATTGTCATCCTGGCCCGTTCTCAATGAGCTGTaGGGCACACCTCCCAGACGGGGCGGTGGCCGGGCAGAGGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SAKPPLSSWPVLNEL*GTPPRRGGGRAEGL Trigger: GAGCCCCTCTGCCCGGCCACCGCCCCGTCTGGGAGGTGTGCCCAACAGCTCATTGAGAACGGGCCAGGATGACAATGGCGGCTTTGCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
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| CDS TCA 72 bp | GGCTGGAGCGAGCACAGTGGCACAATCCTAGCCCTCTaGAGCCCTGAACTCCTGGGTTCGCTCCTCTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GWSEHSGTILAL*SPELLGSLLSP Trigger: AGGCGAGAGGAGCGAACCCAGGAGTTCAGGGCTTCAGAGGGCTAGGATTGTGCCACTGTGCTCGCTCCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474698.5 |
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| CDS TCA 72 bp | CGAGCACAGTGGCACAATCCTAGCCTTCTGAAGCCCTaGACTCCTGGGTTCGCTCCTCTCGCCTCAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RAQWHNPSLLKP*TPGFAPLASAS Trigger: GGAGGCTGAGGCGAGAGGAGCGAACCCAGGAGTTCAGGGCTTCAGAAGGCTAGGATTGTGCCACTGTGCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
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| CDS TCA 72 bp | GGCTGGAGCGAGCACAGTGGCACAATCCTAGCCTTCTaGAGCCCTGAACTCCTGGGTTCGCTCCTCTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GWSEHSGTILAF*SPELLGSLLSP Trigger: AGGCGAGAGGAGCGAACCCAGGAGTTCAGGGCTTCAGAAGGCTAGGATTGTGCCACTGTGCTCGCTCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
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| CDS CCA 72 bp | GGTTTGGCAGGGATAGGAGGCCTCTCTCAATCCATGTaGGCTCATTATCCGGCAGGCGGGCTGAGGCTTATC | + |
|
Preference number: 6 (lower is better) Translates to: GLAGIGGLSQSM*AHYPAGGLRLI Trigger: GATAAGCCTCAGCCCGCCTGCCGGATAATGAGCCCACATGGATTGAGAGAGGCCTCCTATCCCTGCCAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000422863.1 ENST00000445944.1 |
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| CDS CCA 72 bp | ACCAGTTGGTGGCCTGTTAGAAACTGGACCACGCAGTaGGTGAGCCAGCATTACCAACTGAGCCCCGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSWWPVRNWTTQ*VSQHYQLSPAF Trigger: GAAGGCGGGGCTCAGTTGGTAATGCTGGCTCACCCACTGCGTGGTCCAGTTTCTAACAGGCCACCAACTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460633.1 |
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| CDS GCA 72 bp | TTACAGTATGGAGGTTCCCCTGCACTGCCCACATTGTaGCTAATGGATGAGCTGAGCCTGACCAGGGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LQYGGSPALPTL*LMDELSLTRAL Trigger: GAGTGCCCTGGTCAGGCTCAGCTCATCCATTAGGCACAATGTGGGCAGTGCAGGGGAACCTCCATACTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS CAA 72 bp | GCTTTACAGTATGGAGGTTCCCCTGCACTGCCCACATaGTGCCTAATGGATGAGCTGAGCCTGACCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ALQYGGSPALPT*CLMDELSLTRA Trigger: TGCCCTGGTCAGGCTCAGCTCATCCATTAGGCACAATGTGGGCAGTGCAGGGGAACCTCCATACTGTAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
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| CDS TCA 72 bp | CTCAATCCATGTGGGCTCATTATCCGGCAGGCGGGCTaGGGCTTATCACAGGTGCTGGAAAGCTCTCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LNPCGLIIRQAG*GLSQVLESSLE Trigger: TTCAAGAGAGCTTTCCAGCACCTGTGATAAGCCTCAGCCCGCCTGCCGGATAATGAGCCCACATGGATTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000422863.1 ENST00000445944.1 |
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| CDS TCA 72 bp | CTCAATCCATGTGGGCTCATTATCCAGCAGGCGGGCTaGGGCTTATCACAGGTGCTGGAAAGCTCTCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LNPCGLIIQQAG*GLSQVLESSLE Trigger: TTCAAGAGAGCTTTCCAGCACCTGTGATAAGCCTCAGCCCGCCTGCTGGATAATGAGCCCACATGGATTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414549.1 ENST00000448163.1 |
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| CDS GCA 72 bp | AGCAGTTGCTGGTTCACAGAAAAACTGAGCAGAAGCTaGAGAGATATCCCAAAGGTTCCCAACCCCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSCWFTEKLSRS*RDIPKVPNPLG Trigger: GCCCAGGGGGTTGGGAACCTTTGGGATATCTCTGCAGCTTCTGCTCAGTTTTTCTGTGAACCAGCAACTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
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| CDS CCA 72 bp | GTCTTCCATAAAACTGGTCCCTGGTGCCAAAAACGTTaGGGACGGCTGCCAGATACATTCTGCTCCCACACA | + |
|
Preference number: 6 (lower is better) Translates to: VFHKTGPWCQKR*GRLPDTFCSHT Trigger: TGTGTGGGAGCAGAATGTATCTGGCAGCCGTCCCCAACGTTTTTGGCACCAGGGACCAGTTTTATGGAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS GCA 72 bp | TCATTATCCGGCAGGCGGGCTGAGGCTTATCACAGGTaGTGGAAAGCTCTCTTGAATAAACTGCACAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLSGRRAEAYHR*WKALLNKLHNK Trigger: TTTATTGTGCAGTTTATTCAAGAGAGCTTTCCAGCACCTGTGATAAGCCTCAGCCCGCCTGCCGGATAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000422863.1 ENST00000445944.1 |
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| CDS GCA 72 bp | TCATTATCCAGCAGGCGGGCTGAGGCTTATCACAGGTaGTGGAAAGCTCTCTTGAATAAACTGCACAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLSSRRAEAYHR*WKALLNKLHNK Trigger: TTTATTGTGCAGTTTATTCAAGAGAGCTTTCCAGCACCTGTGATAAGCCTCAGCCCGCCTGCTGGATAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414549.1 ENST00000448163.1 |
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| CDS CAA 72 bp | CACCATGGCCGGACGGGCTCCCCTGTTTGTCTGTTATaGGTGTATAAGAATGCTTGTGATTTTTGTACATTG | + |
|
Preference number: 6 (lower is better) Translates to: HHGRTGSPVCLL*VYKNACDFCTL Trigger: CAATGTACAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGGGGAGCCCGTCCGGCCATGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
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| CDS CCA 72 bp | AAAGGAGTTAAAACATTCTCATGTGGCTTTACAGTATaGAGGTTCCCCTGCACTGCCCACATTGTGCCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: KGVKTFSCGFTV*RFPCTAHIVPN Trigger: ATTAGGCACAATGTGGGCAGTGCAGGGGAACCTCCATACTGTAAAGCCACATGAGAATGTTTTAACTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000461508.5 ENST00000468299.5 |
||
| CDS CAA 72 bp | AGTTATCTAGTGGAAGTTCCCATATGCTGGATCTTGTaGGTTTCATCCCTGTGGTGTCATTCGCTATGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SYLVEVPICWIL*VSSLWCHSLWD Trigger: ATCCCATAGCGAATGACACCACAGGGATGAAACCAACAAGATCCAGCATATGGGAACTTCCACTAGATAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
||
| CDS TCA 72 bp | GTTTCCATATTCTGGATCTTGTTGGTTGCATCCCTGTaGTGTCATTCACTGTGGGATTTGTTAGTTGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: VSIFWILLVASL*CHSLWDLLVGL Trigger: GAGTCCAACTAACAAATCCCACAGTGAATGACATCACAGGGATGCAACCAACAAGATCCAGAATATGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460633.1 |
||
| CDS GCA 72 bp | TCTCATAGGAGCGCGAACCCTATTGTTAACTGTGCATaGAAAAGATCTAGGTTGCATGTTCCTTATGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SHRSANPIVNCA*KRSRLHVPYEN Trigger: GTTCTCATAAGGAACATGCAACCTAGATCTTTTGCATGCACAGTTAACAATAGGGTTCGCGCTCCTATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
||
| CDS CAA 72 bp | AGTTATCTAGTGGAAGTTCCCATATTCTGGATCTTGTaGGTTTCATCCCTGTGGTGTCATTCGCTATGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SYLVEVPIFWIL*VSSLWCHSLWD Trigger: ATCCCATAGCGAATGACACCACAGGGATGAAACCAACAAGATCCAGAATATGGGAACTTCCACTAGATAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474698.5 |
||
| CDS CAA 72 bp | TTGAGTTATCTAGTGGAAGTTCCCATATTCTGGATCTaGTTGGTTTCATCCCTGTGGTGTCATTCGCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: LSYLVEVPIFWI*LVSSLWCHSLW Trigger: CCATAGCGAATGACACCACAGGGATGAAACCAACAAGATCCAGAATATGGGAACTTCCACTAGATAACTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474698.5 |
||
| CDS TCA 72 bp | TTGCATGTTCCTTATGAGAACCTTGCTAATGCTTTTTaGTCTGAGGTGGAACAGTTTCACAGTTTCATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LHVPYENLANAF*SEVEQFHSFIP Trigger: GGGGATGAAACTGTGAAACTGTTCCACCTCAGATCAAAAAGCATTAGCAAGGTTCTCATAAGGAACATGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS TCA 72 bp | CTTTATTTTAAAGCAGTTGCTGGTTCACAGAAAAACTaGGCAGAAGCTGCAGAGATATCCCAAAGGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LYFKAVAGSQKN*AEAAEISQRFP Trigger: TGGGAACCTTTGGGATATCTCTGCAGCTTCTGCTCAGTTTTTCTGTGAACCAGCAACTGCTTTAAAATAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
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| CDS CCA 72 bp | ATCACCCAAAGTCCATGGTTTACATTGTCTCACTCTTaGTGTTGTACATTCTGTGGATTTGGGCAAATGCAT | + |
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Preference number: 6 (lower is better) Translates to: ITQSPWFTLSHS*CCTFCGFGQMH Trigger: ATGCATTTGCCCAAATCCACAGAATGTACAACACCAAGAGTGAGACAATGTAAACCATGGACTTTGGGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS CAA 72 bp | TATCACCCAAAGTCCATGGTTTACATTGTCTCACTCTaGGTGTTGTACATTCTGTGGATTTGGGCAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: YHPKSMVYIVSL*VLYILWIWANA Trigger: TGCATTTGCCCAAATCCACAGAATGTACAACACCAAGAGTGAGACAATGTAAACCATGGACTTTGGGTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS CAA 90 bp | AACTTACATTGGCACATCATTATCACCCAAAGTCCATGGTTTACATaGTCTCACTCTTGGTGTTGTACATTCTGTGGATTTGGGCAAATG | + |
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Preference number: 6 (lower is better) Translates to: NLHWHIIITQSPWFT*SHSWCCTFCGFGQM Trigger: CATTTGCCCAAATCCACAGAATGTACAACACCAAGAGTGAGACAATGTAAACCATGGACTTTGGGTGATAATGATGTGCCAATGTAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS CAA 90 bp | ACTGTGCATGCAAAAGATCTAGGTTGCATGTTCCTTATGAGAACCTaGCTAATGCTTTTTGATCTGAGGTGGAACAGTTTCACAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: TVHAKDLGCMFLMRT*LMLFDLRWNSFTVS Trigger: TGAAACTGTGAAACTGTTCCACCTCAGATCAAAAAGCATTAGCAAGGTTCTCATAAGGAACATGCAACCTAGATCTTTTGCATGCACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS TCA 72 bp | TATGGCCATTTTCACGATATTGATTCTTCCTACCCATaGGGATGGAATGTTCTTCCATTGGTTTGTATCCTC | + |
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Preference number: 6 (lower is better) Translates to: YGHFHDIDSSYP*GWNVLPLVCIL Trigger: GAGGATACAAACCAATGGAAGAACATTCCATCCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
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| CDS TCA 72 bp | TATGGCCATTTTCACGATATTGATTCTTCCTACCCATaGGCATGGAATGTTCTTCCATTGGTTTGTATCCTC | + |
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Preference number: 6 (lower is better) Translates to: YGHFHDIDSSYP*AWNVLPLVCIL Trigger: GAGGATACAAACCAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474698.5 |
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| CDS GCA 72 bp | TCTAGTAGAAGTTTCCATATTCTGGATCTTGTTGGTTaGATCCCTGTGATGTCATTCACTGTGGGATTTGTT | + |
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Preference number: 6 (lower is better) Translates to: SSRSFHILDLVG*IPVMSFTVGFV Trigger: AACAAATCCCACAGTGAATGACATCACAGGGATGCAACCAACAAGATCCAGAATATGGAAACTTCTACTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460633.1 |
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| CDS CCA 72 bp | CTTATGAGAACCTTGCTAATGCTTTTTGATCTGAGGTaGAACAGTTTCACAGTTTCATCCCCAAATCATACC | + |
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Preference number: 6 (lower is better) Translates to: LMRTLLMLFDLR*NSFTVSSPNHT Trigger: GGTATGATTTGGGGATGAAACTGTGAAACTGTTCCACCTCAGATCAAAAAGCATTAGCAAGGTTCTCATAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS CAA 72 bp | TGGCACATCATTATCACCCAAAGTCCATGGTTTACATaGTCTCACTCTTGGTGTTGTACATTCTGTGGATTT | + |
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Preference number: 6 (lower is better) Translates to: WHIIITQSPWFT*SHSWCCTFCGF Trigger: AAATCCACAGAATGTACAACACCAAGAGTGAGACAATGTAAACCATGGACTTTGGGTGATAATGATGTGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS CAA 72 bp | GCAAAAGATCTAGGTTGCATGTTCCTTATGAGAACCTaGCTAATGCTTTTTGATCTGAGGTGGAACAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: AKDLGCMFLMRT*LMLFDLRWNSF Trigger: GAAACTGTTCCACCTCAGATCAAAAAGCATTAGCAAGGTTCTCATAAGGAACATGCAACCTAGATCTTTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS TCA 72 bp | AGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTaGTTGGACTGTAAACTAGTTCAACCATTGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RGCGEIGTLLHC*LDCKLVQPLWK Trigger: CTTCCACAATGGTTGAACTAGTTTACAGTCCAATCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS CCA 72 bp | AACTTACATTGGCACATCATTATCACCCAAAGTCCATaGTTTACATTGTCTCACTCTTGGTGTTGTACATTC | + |
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Preference number: 6 (lower is better) Translates to: NLHWHIIITQSP*FTLSHSWCCTF Trigger: GAATGTACAACACCAAGAGTGAGACAATGTAAACCATGGACTTTGGGTGATAATGATGTGCCAATGTAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS GCA 72 bp | ACCCTATTGTTAACTGTGCATGCAAAAGATCTAGGTTaGATGTTCCTTATGAGAACCTTGCTAATGCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: TLLLTVHAKDLG*MFLMRTLLMLF Trigger: AAAAAGCATTAGCAAGGTTCTCATAAGGAACATGCAACCTAGATCTTTTGCATGCACAGTTAACAATAGGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS GCA 72 bp | ACTACTTTAAAGTTCATATGGAACCAAAATAGAGCCTaGATTGCCAAGTCAGTCCTAAGCCAAAAGAACAAA | + |
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Preference number: 6 (lower is better) Translates to: TTLKFIWNQNRA*IAKSVLSQKNK Trigger: TTTGTTCTTTTGGCTTAGGACTGACTTGGCAATGCAGGCTCTATTTTGGTTCCATATGAACTTTAAAGTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474698.5 |
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| CDS CAA 72 bp | AACCCTATTGTTAACTGTGCATGCAAAAGATCTAGGTaGCATGTTCCTTATGAGAACCTTGCTAATGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: NPIVNCACKRSR*HVPYENLANAF Trigger: AAAAGCATTAGCAAGGTTCTCATAAGGAACATGCAACCTAGATCTTTTGCATGCACAGTTAACAATAGGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS CAA 72 bp | TGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTaGCTTATCAGCAAGCTACCAATGACTTTCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: CTLILYPETLLK*LISKLPMTFFT Trigger: TGTGAAGAAAGTCATTGGTAGCTTGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS CAA 90 bp | CATGGTTTACATTGTCTCACTCTTGGTGTTGTACATTCTGTGGATTaGGGCAAATGCATAATGACATTTTTCAACATCGTGGTATCAAAT | + |
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Preference number: 6 (lower is better) Translates to: HGLHCLTLGVVHSVD*GKCIMTFFNIVVSN Trigger: ATTTGATACCACGATGTTGAAAAATGTCATTATGCATTTGCCCAAATCCACAGAATGTACAACACCAAGAGTGAGACAATGTAAACCATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000476192.5 ENST00000497426.5 |
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| CDS CAA 90 bp | CTGTTATTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTaGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCAAGCTACCA | + |
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Preference number: 6 (lower is better) Translates to: LLLVYKNACDFCTLI*YPETLLKLLISKLP Trigger: TGGTAGCTTGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAATAACAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000474698.5 ENST00000476192.5 ENST00000497426.5 |
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| CDS CAA 90 bp | CATGGTTTACATTGTCTCACTCTTGGTGTTGTACATTCTGTGGATTaGGGCAAATGCATAATGACATTTTTCAACATTGTGGTATCAAAT | + |
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Preference number: 6 (lower is better) Translates to: HGLHCLTLGVVHSVD*GKCIMTFFNIVVSN Trigger: ATTTGATACCACAATGTTGAAAAATGTCATTATGCATTTGCCCAAATCCACAGAATGTACAACACCAAGAGTGAGACAATGTAAACCATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000474698.5 |
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| CDS TCA 72 bp | ACCATTGTGGTATCAAACAGAATAGTTTTATTGCCCTaGAAATCATCTGTGCTCTGTGATGGACATTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: TIVVSNRIVLLP*KSSVLCDGHFH Trigger: ATGAAAATGTCCATCACAGAGCACAGATGATTTTCAGGGCAATAAAACTATTCTGTTTGATACCACAATGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460633.1 |
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| CDS TCA 72 bp | TATAGCTTCTCTTCTCTCTCTCTCTTGAATTGTTGCTaGAGAAATGGAGTTGTTTATCTAGTAGAAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: YSFSSLSLLNCC*RNGVVYLVEVS Trigger: GGAAACTTCTACTAGATAAACAACTCCATTTCTTCAGCAACAATTCAAGAGAGAGAGAGAAGAGAAGCTATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460633.1 |
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