RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000156515

Ensembl transcript IDs: ENST00000298649.8, ENST00000359426.7, ENST00000360289.6, ENST00000421088.5, ENST00000436817.6, ENST00000448642.6, ENST00000450646.6, ENST00000464803.6, ENST00000470050.1, ENST00000476368.6, ENST00000479594.5, ENST00000480047.5, ENST00000483054.5, ENST00000483077.5, ENST00000488644.5, ENST00000493591.6, ENST00000494253.1, ENST00000643399.2

Found 1063 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAG +
Preference number: 1 (lower is better)
Translates to: PRRQALAPASPSATR*EGRGSPLEERSAGE
Trigger: CTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR GCA 90 bp GGTCCAGTCCTCTGTTCTCGCGGATCTTATCCACAACCGCAGCCATaGCTGCGCCACACAGCTGTGCGGCCCTCCTGGACACCACCCCGC +
Preference number: 1 (lower is better)
Translates to: GPVLCSRGSYPQPQP*LRHTAVRPSWTPPR
Trigger: GCGGGGTGGTGTCCAGGAGGGCCGCACAGCTGTGTGGCGCAGGCATGGCTGCGGTTGTGGATAAGATCCGCGAGAACAGAGGACTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR GCA 90 bp GGGGAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTaGCCCCGGGAGGGAGGCCCGGCAGTGTCTGCTGGTGATAATACA +
Preference number: 1 (lower is better)
Translates to: GEEAANAMPTLAFRQ*PREGGPAVSAGDNT
Trigger: TGTATTATCACCAGCAGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR GCA 90 bp TGTAAAGAGATCCGTCGACACCAACCGTGGTCCGCAGCCTGGGTGTaGCCTTGTTATCACGCAGGCGGTTCAAGATGGCGCCCAGTGTGG +
Preference number: 1 (lower is better)
Translates to: CKEIRRHQPWSAAWV*PCYHAGGSRWRPVW
Trigger: CCACACTGGGCGCCATCTTGAACCGCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGACCACGGTTGGTGTCGACGGATCTCTTTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 90 bp TCCGCAGCCTGGGTGTGCCCTTGTTATCACGCAGGCGGTTCAAGATaGCGCCCAGTGTGGCAGCCACCAAGTTGGCTGAGCGAAATGAGA +
Preference number: 1 (lower is better)
Translates to: SAAWVCPCYHAGGSR*RPVWQPPSWLSEMR
Trigger: TCTCATTTCGCTCAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 90 bp GCGTCTTGTAAAGAGATCCGTCGACACCAACCGTGGTCCGCAGCCTaGGTGTGCCCTTGTTATCACGCAGGCGGTTCAAGATGGCGCCCA +
Preference number: 1 (lower is better)
Translates to: ASCKEIRRHQPWSAA*VCPCYHAGGSRWRP
Trigger: TGGGCGCCATCTTGAACCGCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGACCACGGTTGGTGTCGACGGATCTCTTTACAAGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR TCA 90 bp CACACAGCTGTGCGGCCCTCCTGGACACCACCCCGCACACTGTCTTaGCGAGGATACTGTCATCGCAGGTGCTATTCAGACCTAGCTGCT +
Preference number: 1 (lower is better)
Translates to: HTAVRPSWTPPRTLS*RGYCHRRCYSDLAA
Trigger: AGCAGCTAGGTCTGAATAGCACCTGCGATGACAGTATCCTCGTCAAGACAGTGTGCGGGGTGGTGTCCAGGAGGGCCGCACAGCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR GCA 90 bp TTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTaGCAGGAGGGGAGGAAGCAGCTAATGCTATGCCCACACTCGCCT +
Preference number: 1 (lower is better)
Translates to: FVALTHHDAMPGHSG*QEGRKQLMLCPHSP
Trigger: AGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTCCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CCA 90 bp GCCACCAAGTTGGCTGAGCGAAATGAGACAATGGTGCAAACGTGCTaGACTGAGACACAGTCATCATCGGACGGCTCCACTCCCAGGCGG +
Preference number: 1 (lower is better)
Translates to: ATKLAERNETMVQTC*TETQSSSDGSTPRR
Trigger: CCGCCTGGGAGTGGAGCCGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCTCAGCCAACTTGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 90 bp CACGCAGGCGGTTCAAGATGGCGCCCAGTGTGGCAGCCACCAAGTTaGCTGAGCGAAATGAGACAATGGTGCAAACGTGCTGGACTGAGA +
Preference number: 1 (lower is better)
Translates to: HAGGSRWRPVWQPPS*LSEMRQWCKRAGLR
Trigger: TCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR GCA 90 bp GCAGCCACCAAGTTGGCTGAGCGAAATGAGACAATGGTGCAAACGTaGTGGACTGAGACACAGTCATCATCGGACGGCTCCACTCCCAGG +
Preference number: 1 (lower is better)
Translates to: AATKLAERNETMVQT*WTETQSSSDGSTPR
Trigger: CCTGGGAGTGGAGCCGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 90 bp CGCCCAGTGTGGCAGCCACCAAGTTGGCTGAGCGAAATGAGACAATaGTGCAAACGTGCTGGACTGAGACACAGTCATCATCGGACGGCT +
Preference number: 1 (lower is better)
Translates to: RPVWQPPSWLSEMRQ*CKRAGLRHSHHRTA
Trigger: AGCCGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCACACTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR GCA 90 bp CCAGTGTGGCAGCCACCAAGTTGGCTGAGCGAAATGAGACAATGGTaGAAACGTGCTGGACTGAGACACAGTCATCATCGGACGGCTCCA +
Preference number: 1 (lower is better)
Translates to: PVWQPPSWLSEMRQW*KRAGLRHSHHRTAP
Trigger: TGGAGCCGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCACACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR GCA 90 bp GTCTTGACGAGGATACTGTCATCGCAGGTGCTATTCAGACCTAGCTaGTGGAGGATAGCCCGGACCTGGAGCAGTGCTAATCGGTCACTC +
Preference number: 1 (lower is better)
Translates to: VLTRILSSQVLFRPS*WRIARTWSSANRSL
Trigger: GAGTGACCGATTAGCACTGCTCCAGGTCCGGGCTATCCTCCAGCAGCTAGGTCTGAATAGCACCTGCGATGACAGTATCCTCGTCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 90 bp GTGTGCCCTTGTTATCACGCAGGCGGTTCAAGATGGCGCCCAGTGTaGCAGCCACCAAGTTGGCTGAGCGAAATGAGACAATGGTGCAAA +
Preference number: 1 (lower is better)
Translates to: VCPCYHAGGSRWRPV*QPPSWLSEMRQWCK
Trigger: TTTGCACCATTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGCGTGATAACAAGGGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 90 bp TTGACGAGGATACTGTCATCGCAGGTGCTATTCAGACCTAGCTGCTaGAGGATAGCCCGGACCTGGAGCAGTGCTAATCGGTCACTCTCG +
Preference number: 1 (lower is better)
Translates to: LTRILSSQVLFRPSC*RIARTWSSANRSLS
Trigger: CGAGAGTGACCGATTAGCACTGCTCCAGGTCCGGGCTATCCTCCAGCAGCTAGGTCTGAATAGCACCTGCGATGACAGTATCCTCGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 90 bp AACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTaGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCG +
Preference number: 1 (lower is better)
Translates to: NSTRSILYPTIYTIS*ILLSSPRRQALAPA
Trigger: CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CCA 90 bp AGTCATCATCGGACGGCTCCACTCCCAGGCGGGTCAGGATTTCTTTaGCATTGTGGAGGCCTTCCTTATTCTTTTCGATGGCTGACACAT +
Preference number: 1 (lower is better)
Translates to: SHHRTAPLPGGSGFL*HCGGLPYSFRWLTH
Trigger: ATGTGTCAGCCATCGAAAAGAATAAGGAAGGCCTCCACAATGCCAAAGAAATCCTGACCCGCCTGGGAGTGGAGCCGTCCGATGATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR GCA 90 bp GTCCCCTCGCTTTTTGATGGCTTTGTTAAGCAGTTTGACCACATCTaGTCCTTCCACTCCGCTCGCTTTAAATCGCTTTGTCCAGGTGAT +
Preference number: 1 (lower is better)
Translates to: VPSLFDGFVKQFDHI*SFHSARFKSLCPGD
Trigger: ATCACCTGGACAAAGCGATTTAAAGCGAGCGGAGTGGAAGGAGCAGATGTGGTCAAACTGCTTAACAAAGCCATCAAAAAGCGAGGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 90 bp TCCTCTCTCCTTTTTATCGCATCCCTTAGTAAGGTGACTACATCGTaGCCCACGCAGTCTGTTGCCTTAAAACCCTTTGTCCACGTGATC +
Preference number: 1 (lower is better)
Translates to: SSLLFIASLSKVTTS*PTQSVALKPFVHVI
Trigger: GATCACGTGGACAAAGGGTTTTAAGGCAACAGACTGCGTGGGCCACGATGTAGTCACCTTACTAAGGGATGCGATAAAAAGGAGAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 90 bp GAAATCTCCCTTTTCAGAGCCATCAGGAATGGACCTTACGAATGTTaGCAACATCTTGACTGTGGCTGTTGGATTAAAATCCCGGGAGAG +
Preference number: 1 (lower is better)
Translates to: EISLFRAIRNGPYEC*QHLDCGCWIKIPGE
Trigger: CTCTCCCGGGATTTTAATCCAACAGCCACAGTCAAGATGTTGCCAACATTCGTAAGGTCCATTCCTGATGGCTCTGAAAAGGGAGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 90 bp AACATGATCAAAAAGCTGGCTTCCACTGCCGTGCACGATGTTCTCTaGGGTGTCATAAACCTCGGACTCCATGTGAACATTCTGGTTTTT +
Preference number: 1 (lower is better)
Translates to: NMIKKLASTAVHDVL*GVINLGLHVNILVF
Trigger: AAAAACCAGAATGTTCACATGGAGTCCGAGGTTTATGACACCCCAGAGAACATCGTGCACGGCAGTGGAAGCCAGCTTTTTGATCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 90 bp CTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTaGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGAC +
Preference number: 1 (lower is better)
Translates to: LTKRWEIPVMALFVG*FLLSKWRQDTFPQD
Trigger: GTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CCA 90 bp ACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTaGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCA +
Preference number: 1 (lower is better)
Translates to: TAHKAVGNSSDGIVC*LVPFIQMETRHISA
Trigger: TGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR TCA 90 bp GGTGGTGTGATTTTCCATCTCCAGCCAATAAATAACTCTGTTGGATaGATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGG +
Preference number: 1 (lower is better)
Translates to: GGVIFHLQPINNSVG*MHTLEMDATTLHTW
Trigger: CCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAGTTATTTATTGGCTGGAGATGGAAAATCACACCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CAA 90 bp AGAGATCCGTCGACACCAACCGTGGTCCGCAGCCTGGGTGTGCCCTaGTTATCACGCAGGCGGTTCAAGATGGCGCCCAGTGTGGCAGCC +
Preference number: 2 (lower is better)
Translates to: RDPSTPTVVRSLGVP*LSRRRFKMAPSVAA
Trigger: GGCTGCCACACTGGGCGCCATCTTGAACCGCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGACCACGGTTGGTGTCGACGGATCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR GCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGCACACCACGATGCGATaGCAGGCCACAGTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: EEAANAMPTLAFRQCPREHTTMR*QATVGA
Trigger: GGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTG...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR GCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCACTCGCCTTCAGGCAGTaGCCCCGGGAGGGAGGCCCG +
Preference number: 2 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPLAFRQ*PREGGP
Trigger: CGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAG...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CAA 90 bp CACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATaGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: HTRLGLVPRTHDFVA*THHDAMPGHSGCQE
Trigger: CTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CAA 90 bp CCACACAGCTGTGCGGCCCTCCTGGACACCACCCCGCACACTGTCTaGACGAGGATACTGTCATCGCAGGTGCTATTCAGACCTAGCTGC +
Preference number: 2 (lower is better)
Translates to: PHSCAALLDTTPHTV*TRILSSQVLFRPSC
Trigger: GCAGCTAGGTCTGAATAGCACCTGCGATGACAGTATCCTCGTCAAGACAGTGTGCGGGGTGGTGTCCAGGAGGGCCGCACAGCTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR TCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGGAGGAGGGATCCGGGTaGGAGATATTATCAACAGCA +
Preference number: 2 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGEEGSG*EILSTA
Trigger: TGCTGTTGATAATATCTCTCACCCGGATCCCTCCTC...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR TCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGATCGCTTTGTCCAGGTaGTCAGGATGGCCTCATCTA +
Preference number: 2 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGIALSR*SGWPHL
Trigger: TAGATGAGGCCATCCTGATCACCTGGACAAAGCGAT...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR GCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGAAGCAGCTAATGCTATaGCCACACTCGCCTTCAGGC +
Preference number: 2 (lower is better)
Translates to: EEAANAMPTLAFRQCPREKQLML*PHSPSG
Trigger: GCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCACCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCG +
Preference number: 2 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVAPSATR*EGRGSP
Trigger: CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGG...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCG +
Preference number: 2 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRPSATR*EGRGSP
Trigger: CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGG...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CAA 90 bp TCACGCAGGCGGTTCAAGATGGCGCCCAGTGTGGCAGCCACCAAGTaGGCTGAGCGAAATGAGACAATGGTGCAAACGTGCTGGACTGAG +
Preference number: 2 (lower is better)
Translates to: SRRRFKMAPSVAATK*AERNETMVQTCWTE
Trigger: CTCAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR TCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGACGATTTTGTGGCATTaGCACACCACGATGCGATGC +
Preference number: 2 (lower is better)
Translates to: EEAANAMPTLAFRQCPRETILWH*HTTMRC
Trigger: GCATCGCATCGTGGTGTGTCAATGCCACAAAATCGT...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR TCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGCTCCCCATTCTGTATTaGTACACATCCTCCCCTCGT +
Preference number: 2 (lower is better)
Translates to: EEAANAMPTLAFRQCPRELPILY*YTSSPR
Trigger: ACGAGGGGAGGATGTGTATCAATACAGAATGGGGAG...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACCCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCG +
Preference number: 2 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYPSATR*EGRGSP
Trigger: CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGG...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CAA 90 bp GTGAGCAGCTCCGGGGTGATCCGCCCTTCAAATAAGAGGCCCTCCTaGGCCATCTTGACTAGGATCAGTCGAACCAGCTCTCCCAAGTAC +
Preference number: 2 (lower is better)
Translates to: VSSSGVIRPSNKRPS*AILTRISRTSSPKY
Trigger: GTACTTGGGAGAGCTGGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGGGCCTCTTATTTGAAGGGCGGATCACCCCGGAGCTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR TCA 90 bp CTGGACACCACCCCGCACACTGTCTTGACGAGGATACTGTCATCGCAGGTGCTAGCATCCTGGGGCCTTTaGTCCCCATGTAGTCCAAGA +
Preference number: 2 (lower is better)
Translates to: LDTTPHTVLTRILSSQVLASWGL*SPCSPR
Trigger: TCTTGGACTACATGGGGATCAAAGGCCCCAGGATGC...TAGCACCTGCGATGACAGTATCCTCGTCAAGACAGTGTGCGGGGTGGTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAACCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCG +
Preference number: 2 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKPSATR*EGRGSP
Trigger: CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGG...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CAA 90 bp ACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTCTCCC +
Preference number: 2 (lower is better)
Translates to: TRSILYPTIYTISWI*LSSPRRQALAPASP
Trigger: GGGAGACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR TCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGTGGGAAATTCCAGTaGTGGCATTGTTTGTTGGTT +
Preference number: 2 (lower is better)
Translates to: EEAANAMPTLAFRQCPREGGKFQ*WHCLLV
Trigger: AACCAACAAACAATGCCATCACTGGAATTTCCCACC...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR GCA 90 bp GTTCTCCGGACGAAGGAGGGCAGCATCTTAACCACGGCATTGTTGTGCGTCTGCAAGCAGCTAATGCTATaGCCACACTCGCCTTCAGGC +
Preference number: 2 (lower is better)
Translates to: VLRTKEGSILTTALLCVCKQLML*PHSPSG
Trigger: GCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT...GCAGACGCACAACAATGCCGTGGTTAAGATGCTGCCCTCCTTCGTCCGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR GCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGTCCCGGACTCTTAGCTaGTTGCCTCTGTGCGTAACC +
Preference number: 2 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALSRTLS*LPLCVT
Trigger: GGTTACGCACAGAGGCAAGCAGCTAAGAGTCCGGGA...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR TCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGGCAAACGTGCTGGACTaGGACACAGTCATCATCGGA +
Preference number: 2 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALANVLD*DTVIIG
Trigger: TCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGC...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR GCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCATTGACACACCACGATaGGATGCCAGGCCACAGTGG +
Preference number: 2 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGIDTPR*DARPQW
Trigger: CCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAAT...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGCCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCG +
Preference number: 2 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVPSATR*EGRGSP
Trigger: CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGG...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CAA 90 bp CAGTCATCATCGGACGGCTCCACTCCCAGGCGGGTCAGGATTTCTTaGGCATTGTGGAGGCCTTCCTTATTCTTTTCGATGGCTGACACA +
Preference number: 2 (lower is better)
Translates to: QSSSDGSTPRRVRIS*ALWRPSLFFSMADT
Trigger: TGTGTCAGCCATCGAAAAGAATAAGGAAGGCCTCCACAATGCCAAAGAAATCCTGACCCGCCTGGGAGTGGAGCCGTCCGATGATGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR TCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAACGATTTTGTGGCATTaGCACACCACGATGCGATGC +
Preference number: 2 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVATILWH*HTTMRC
Trigger: GCATCGCATCGTGGTGTGTCAATGCCACAAAATCGT...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR TCA 90 bp GCTTGTAGAGTGTCCCGTCCACTCCCACAGTCACATTCAGACGGTCCAGTCCTCCAAGATCCAGGGCAATaGAATCTCCCTTTTCAGAGC +
Preference number: 2 (lower is better)
Translates to: ACRVSRPLPQSHSDGPVLQDPGQ*NLPFQS
Trigger: GCTCTGAAAAGGGAGATTTCATTGCCCTGGATCTTG...GAGGACTGGACCGTCTGAATGTGACTGTGGGAGTGGACGGGACACTCTACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR GCA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCCCATTAGTTGGATTTTaGTTTCCTCCCCGCGCCGGC +
Preference number: 2 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGPLVGF*FPPRAG
Trigger: GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR GCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGTACATTAGAAATGGATaGCACTACACTTCACACGTG +
Preference number: 2 (lower is better)
Translates to: EEAANAMPTLAFRQCPREYIRNG*HYTSHV
Trigger: CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTA...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR GCA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGTACATTAGAAATGGATaGCACTACACTTCACACGTG +
Preference number: 2 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREYIRNG*HYTSHV
Trigger: CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTA...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGATATATACCATTAGTTaGATTTTGCTTTCCTCCCCG +
Preference number: 2 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGIYTIS*ILLSSP
Trigger: CGGGGAGGAAAGCAAAATCCAACTAATGGTATATAT...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR GCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGATTGACACACCACGATaGGATGCCAGGCCACAGTGG +
Preference number: 2 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLIDTPR*DARPQW
Trigger: CCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAAT...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR GCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCACGAGACAAACAGAATaGAAGACTGTCACACGCGGC +
Preference number: 2 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGTRQTE*KTVTRG
Trigger: GCCGCGTGTGACAGTCTTGCATTCTGTTTGTCTCGT...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGATGGCATTGTTTGTTaGTTGGTTCCTTTTATCCAA +
Preference number: 2 (lower is better)
Translates to: EEAANAMPTLAFRQCPREDGIVC*LVPFIQ
Trigger: TTGGATAAAAGGAACCAACCAACAAACAATGCCATC...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR TCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACACCTCGGACTCCATGTaGACATTCTGGTTTTTCTCA +
Preference number: 2 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHTSDSM*TFWFFS
Trigger: TGAGAAAAACCAGAATGTTCACATGGAGTCCGAGGT...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR TCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAAGGCACTCAGCAACATaGTCAAAAAGCTGGCTTCCA +
Preference number: 2 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPRHSAT*SKSWLP
Trigger: TGGAAGCCAGCTTTTTGATCATGTTGCTGAGTGCCT...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCACTACACTTCACACGTaGGGGACCAGGTCAAAATCA +
Preference number: 2 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGTTLHT*GTRSKS
Trigger: TGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR TCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGAGGAGGGATCCGGGTaGGAGATATTATCAACAGCA +
Preference number: 2 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQEEGSG*EILSTA
Trigger: TGCTGTTGATAATATCTCTCACCCGGATCCCTCCTC...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CCA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGGGACCTTACGAATGTTaGCAACATCTTGACTGTGGC +
Preference number: 2 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGGPYEC*QHLDCG
Trigger: GCCACAGTCAAGATGTTGCCAACATTCGTAAGGTCC...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CCA 90 bp CGGTTCAAGATGGCGCCCAGTGTGGCAGCCACCAAGTTGGCTGAGCGAAATGAGATTTCTTTGGCATTGTaGAGGCCTTCCTTATTCTTT +
Preference number: 2 (lower is better)
Translates to: RFKMAPSVAATKLAERNEISLAL*RPSLFF
Trigger: AAAGAATAAGGAAGGCCTCCACAATGCCAAAGAAAT...CTCATTTCGCTCAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCTTGAACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CAA 90 bp AACCTCGGACTCCATGTGAACATTCTGGTTTTTCTCATGATTCACTaGCACCCGCAGAATTCGAAAGGAAGACCCACCAAGATCCAGGGC +
Preference number: 2 (lower is better)
Translates to: NLGLHVNILVFLMIH*HPQNSKGRPTKIQG
Trigger: GCCCTGGATCTTGGTGGGTCTTCCTTTCGAATTCTGCGGGTGCAAGTGAATCATGAGAAAAACCAGAATGTTCACATGGAGTCCGAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR GCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCCCATTAGTTGGATTTTaGTTTCCTCCCCGCGCCGGC +
Preference number: 2 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVPLVGF*FPPRAG
Trigger: GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGATATATACCATTAGTTaGATTTTGCTTTCCTCCCCG +
Preference number: 2 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALIYTIS*ILLSSP
Trigger: CGGGGAGGAAAGCAAAATCCAACTAATGGTATATAT...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGGCATTGTTTGTTGGTTaGTTCCTTTTATCCAAATGG +
Preference number: 2 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALALFVG*FLLSKW
Trigger: CCATTTGGATAAAAGGAACCAACCAACAAACAATGC...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAACTTGACTGTGGCTGTTaGATTAAAATCCCGGGAGAG +
Preference number: 2 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKLDCGC*IKIPGE
Trigger: CTCTCCCGGGATTTTAATCCAACAGCCACAGTCAAG...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACCAGAGCCATCAGGAATaGACCTTACGAATGTTGGCA +
Preference number: 2 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYQSHQE*TLRMLA
Trigger: TGCCAACATTCGTAAGGTCCATTCCTGATGGCTCTG...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR TCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCGAGGAGGGATCCGGGTaGGAGATATTATCAACAGCA +
Preference number: 2 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVEEGSG*EILSTA
Trigger: TGCTGTTGATAATATCTCTCACCCGGATCCCTCCTC...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAATATATACCATTAGTTaGATTTTGCTTTCCTCCCCG +
Preference number: 2 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPIYTIS*ILLSSP
Trigger: CGGGGAGGAAAGCAAAATCCAACTAATGGTATATAT...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CAA 90 bp GCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTaGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGA +
Preference number: 2 (lower is better)
Translates to: AHKAVGNSSDGIVCW*VPFIQMETRHISAG
Trigger: TCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CAA 90 bp CATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATaGTTTGTTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACA +
Preference number: 2 (lower is better)
Translates to: HTTRLTKRWEIPVMA*FVGWFLLSKWRQDT
Trigger: TGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CCA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCATATATACCATTAGTTaGATTTTGCTTTCCTCCCCG +
Preference number: 2 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGIYTIS*ILLSSP
Trigger: CGGGGAGGAAAGCAAAATCCAACTAATGGTATATAT...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR GCA 90 bp TCTCATACCTTTGTTTCCCAGCATTTAGGGAATATTCGTCCACCAGTCTGTCGTTCTTCCCCAGTGCCCTaGATGATTTCAATAGGAATG +
Preference number: 2 (lower is better)
Translates to: SHTFVSQHLGNIRPPVCRSSPVP*MISIGM
Trigger: CATTCCTATTGAAATCATGCAGGGCACTGGGGAAGA...ACGACAGACTGGTGGACGAATATTCCCTAAATGCTGGGAAACAAAGGTATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGATATATACCATTAGTTaGATTTTGCTTTCCTCCCCG +
Preference number: 2 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVIYTIS*ILLSSP
Trigger: CGGGGAGGAAAGCAAAATCCAACTAATGGTATATAT...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CCA 72 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGT +
Preference number: 3 (lower is better)
Translates to: QALAPASPSATR*EGRGSPLEERS
Trigger: ACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR GCA 72 bp AGTGGGTGCCAGGAGGGGAGGAAGCAGCTAATGCTATaGCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGG +
Preference number: 3 (lower is better)
Translates to: SGCQEGRKQLML*PHSPSGSAPGR
Trigger: CCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTCCCCTCCTGGCACCCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR GCA 72 bp ATCCGTCGACACCAACCGTGGTCCGCAGCCTGGGTGTaGCCTTGTTATCACGCAGGCGGTTCAAGATGGCGC +
Preference number: 3 (lower is better)
Translates to: IRRHQPWSAAWV*PCYHAGGSRWR
Trigger: GCGCCATCTTGAACCGCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGACCACGGTTGGTGTCGACGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR GCA 72 bp CTCTGTTCTCGCGGATCTTATCCACAACCGCAGCCATaGCTGCGCCACACAGCTGTGCGGCCCTCCTGGACA +
Preference number: 3 (lower is better)
Translates to: LCSRGSYPQPQP*LRHTAVRPSWT
Trigger: TGTCCAGGAGGGCCGCACAGCTGTGTGGCGCAGGCATGGCTGCGGTTGTGGATAAGATCCGCGAGAACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 72 bp TGGGTGTGCCCTTGTTATCACGCAGGCGGTTCAAGATaGCGCCCAGTGTGGCAGCCACCAAGTTGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: WVCPCYHAGGSR*RPVWQPPSWLS
Trigger: GCTCAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGCGTGATAACAAGGGCACACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CAA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGTGGCAGCCACCAAGTaGGCTGAGCGAAATGAGACA +
Preference number: 3 (lower is better)
Translates to: EEAANAMPTLAFRQCPREVAATK*AERNET
Trigger: TGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCAC...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR GCA 72 bp ACGGACACACGATTTTGTGGCATTGACACACCACGATaGGATGCCAGGCCACAGTGGGTGCCAGGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: TDTRFCGIDTPR*DARPQWVPGGE
Trigger: CTCCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CAA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGTAGGGGGTCGCCGCTaGAAGAGAGAAGTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPVGGRR*KREVLE
Trigger: CTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTAC...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CCA 72 bp AAAGAGATCCGTCGACACCAACCGTGGTCCGCAGCCTaGGTGTGCCCTTGTTATCACGCAGGCGGTTCAAGA +
Preference number: 3 (lower is better)
Translates to: KEIRRHQPWSAA*VCPCYHAGGSR
Trigger: TCTTGAACCGCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGACCACGGTTGGTGTCGACGGATCTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CAA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCGTAGGGGGTCGCCGCTaGAAGAGAGAAGTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGVGGRR*KREVLE
Trigger: CTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTAC...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CAA 90 bp GCAGTAGGCTGGGGATCCCGGACTCTTAGCTGCTTGCCTCTGTGCGTAACCGCAAATAAGAGGCCCTCCTaGGCCATCTTGACTAGGATC +
Preference number: 3 (lower is better)
Translates to: AVGWGSRTLSCLPLCVTANKRPS*AILTRI
Trigger: GATCCTAGTCAAGATGGCCAAGGAGGGCCTCTTATT...TGCGGTTACGCACAGAGGCAAGCAGCTAAGAGTCCGGGATCCCCAGCCTACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CAA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGGTAGGGGGTCGCCGCTaGAAGAGAGAAGTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWVGGRR*KREVLE
Trigger: CTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTAC...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CAA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGG +
Preference number: 3 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHTISWI*LSSPRR
Trigger: CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CCA 72 bp CGGACGGCTCCACTCCCAGGCGGGTCAGGATTTCTTTaGCATTGTGGAGGCCTTCCTTATTCTTTTCGATGG +
Preference number: 3 (lower is better)
Translates to: RTAPLPGGSGFL*HCGGLPYSFRW
Trigger: CCATCGAAAAGAATAAGGAAGGCCTCCACAATGCCAAAGAAATCCTGACCCGCCTGGGAGTGGAGCCGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 72 bp GGTTCAAGATGGCGCCCAGTGTGGCAGCCACCAAGTTaGCTGAGCGAAATGAGACAATGGTGCAAACGTGCT +
Preference number: 3 (lower is better)
Translates to: GSRWRPVWQPPS*LSEMRQWCKRA
Trigger: AGCACGTTTGCACCATTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCTTGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 72 bp TGTTATCACGCAGGCGGTTCAAGATGGCGCCCAGTGTaGCAGCCACCAAGTTGGCTGAGCGAAATGAGACAA +
Preference number: 3 (lower is better)
Translates to: CYHAGGSRWRPV*QPPSWLSEMRQ
Trigger: TTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGCGTGATAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 72 bp ATACTGTCATCGCAGGTGCTATTCAGACCTAGCTGCTaGAGGATAGCCCGGACCTGGAGCAGTGCTAATCGG +
Preference number: 3 (lower is better)
Translates to: ILSSQVLFRPSC*RIARTWSSANR
Trigger: CCGATTAGCACTGCTCCAGGTCCGGGCTATCCTCCAGCAGCTAGGTCTGAATAGCACCTGCGATGACAGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR TCA 72 bp GGGAATATTCGTCCACCAGTCTGTCGTAGTGTGTCCTaGTATCATCCAGACACCCGTTGTCCCCAAAGGCCC +
Preference number: 3 (lower is better)
Translates to: GNIRPPVCRSVS*YHPDTRCPQRP
Trigger: GGGCCTTTGGGGACAACGGGTGTCTGGATGATATCAGGACACACTACGACAGACTGGTGGACGAATATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR GCA 72 bp CACTCTCGATCTGAGAGAGAAACTTGGTCTCAAAGATaGCCCGGGTCTTCAGCGTCTCAGAGATCTGCCCTC +
Preference number: 3 (lower is better)
Translates to: HSRSERETWSQR*PGSSASQRSAL
Trigger: GAGGGCAGATCTCTGAGACGCTGAAGACCCGGGGCATCTTTGAGACCAAGTTTCTCTCTCAGATCGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR GCA 72 bp AGGATACTGTCATCGCAGGTGCTATTCAGACCTAGCTaGTGGAGGATAGCCCGGACCTGGAGCAGTGCTAAT +
Preference number: 3 (lower is better)
Translates to: RILSSQVLFRPS*WRIARTWSSAN
Trigger: ATTAGCACTGCTCCAGGTCCGGGCTATCCTCCAGCAGCTAGGTCTGAATAGCACCTGCGATGACAGTATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CAA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACGTAGGGGGTCGCCGCTaGAAGAGAGAAGTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYVGGRR*KREVLE
Trigger: CTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTAC...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CAA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGG +
Preference number: 3 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYTISWI*LSSPRR
Trigger: CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CAA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGCACGATTTTGTGGCATaGACACACCACGATGCGATG +
Preference number: 3 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALHDFVA*THHDAM
Trigger: CATCGCATCGTGGTGTGTCAATGCCACAAAATCGTG...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR GCA 72 bp AAGTTGGCTGAGCGAAATGAGACAATGGTGCAAACGTaGTGGACTGAGACACAGTCATCATCGGACGGCTCC +
Preference number: 3 (lower is better)
Translates to: KLAERNETMVQT*WTETQSSSDGS
Trigger: GGAGCCGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCTCAGCCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR GCA 72 bp CAGCCACCAAGTTGGCTGAGCGAAATGAGACAATGGTaGAAACGTGCTGGACTGAGACACAGTCATCATCGG +
Preference number: 3 (lower is better)
Translates to: QPPSWLSEMRQW*KRAGLRHSHHR
Trigger: CCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCTCAGCCAACTTGGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 72 bp TTGGCTGAGCGAAATGAGACAATGGTGCAAACGTGCTaGACTGAGACACAGTCATCATCGGACGGCTCCACT +
Preference number: 3 (lower is better)
Translates to: LAERNETMVQTC*TETQSSSDGST
Trigger: AGTGGAGCCGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCTCAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CAA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGG +
Preference number: 3 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKTISWI*LSSPRR
Trigger: CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CAA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGG +
Preference number: 3 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYTISWI*LSSPRR
Trigger: CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CCA 72 bp TCCACTCCCAGGCGGGTCAGGATTTCTTTGGCATTGTaGAGGCCTTCCTTATTCTTTTCGATGGCTGACACA +
Preference number: 3 (lower is better)
Translates to: STPRRVRISLAL*RPSLFFSMADT
Trigger: TGTGTCAGCCATCGAAAAGAATAAGGAAGGCCTCCACAATGCCAAAGAAATCCTGACCCGCCTGGGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 72 bp TGGCAGCCACCAAGTTGGCTGAGCGAAATGAGACAATaGTGCAAACGTGCTGGACTGAGACACAGTCATCAT +
Preference number: 3 (lower is better)
Translates to: WQPPSWLSEMRQ*CKRAGLRHSHH
Trigger: ATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CAA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGATTCCAGTGATGGCATaGTTTGTTGGTTGGTTCCTT +
Preference number: 3 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALIPVMA*FVGWFL
Trigger: AAGGAACCAACCAACAAACAATGCCATCACTGGAAT...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CAA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGCGCTTTTTGATGGCTTaGTTAAGCAGTTTGACCACA +
Preference number: 3 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALRFLMA*LSSLTT
Trigger: TGTGGTCAAACTGCTTAACAAAGCCATCAAAAAGCG...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CAA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAAAGAGGAATCCCTTCTaGGTGAAGTCGATTAAGATG +
Preference number: 3 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAKRNPF*VKSIKM
Trigger: CATCTTAATCGACTTCACCAAGAAGGGATTCCTCTT...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 72 bp AAAAAGCTGGCTTCCACTGCCGTGCACGATGTTCTCTaGGGTGTCATAAACCTCGGACTCCATGTGAACATT +
Preference number: 3 (lower is better)
Translates to: KKLASTAVHDVL*GVINLGLHVNI
Trigger: AATGTTCACATGGAGTCCGAGGTTTATGACACCCCAGAGAACATCGTGCACGGCAGTGGAAGCCAGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CAA 90 bp GAAATGAGACAATGGTGCAAACGTGCTGGACTGAGACACAGTCATCATCGGACGGCTTTGTTAAGCAGTTaGACCACATCTGCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: EMRQWCKRAGLRHSHHRTALLSS*TTSAPS
Trigger: GGAAGGAGCAGATGTGGTCAAACTGCTTAACAAAGC...CGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR TCA 72 bp GAATTCGAAAGGAAGACCCACCAAGATCCAGGGCAATaGAATCTCCCTTTTCAGAGCCATCAGGAATGGACC +
Preference number: 3 (lower is better)
Translates to: EFERKTHQDPGQ*NLPFQSHQEWT
Trigger: GGTCCATTCCTGATGGCTCTGAAAAGGGAGATTTCATTGCCCTGGATCTTGGTGGGTCTTCCTTTCGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR-3UTR CAA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCGGCATTGTTTGTTGGTaGGTTCCTTTTATCCAAATG +
Preference number: 3 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGGIVCW*VPFIQM
Trigger: CATTTGGATAAAAGGAACCAACCAACAAACAATGCC...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CAA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGGTAGGGGGTCGCCGCTaGAAGAGAGAAGTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: IINSTRSILYPTIYTISWVGGRR*KREVLE
Trigger: CTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTAC...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR-3UTR CAA 90 bp GAAATGAGACAATGGTGCAAACGTGCTGGACTGAGACACAGTCATCATCGGACGTTTCTCATGATTCACTaGCACCCGCAGAATTCGAAA +
Preference number: 3 (lower is better)
Translates to: EMRQWCKRAGLRHSHHRTFLMIH*HPQNSK
Trigger: TTTCGAATTCTGCGGGTGCAAGTGAATCATGAGAAA...CGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 72 bp AGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTaGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGG +
Preference number: 3 (lower is better)
Translates to: SLLGHTTRLTKR*EIPVMALFVGW
Trigger: CCAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
3UTR CCA 72 bp CCTTACGAATGTTGGCAACATCTTGACTGTGGCTGTTaGATTAAAATCCCGGGAGAGGCCATTCTTCATCTC +
Preference number: 3 (lower is better)
Translates to: PYECWQHLDCGC*IKIPGEAILHL
Trigger: GAGATGAAGAATGGCCTCTCCCGGGATTTTAATCCAACAGCCACAGTCAAGATGTTGCCAACATTCGTAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 72 bp CTTTTTATCGCATCCCTTAGTAAGGTGACTACATCGTaGCCCACGCAGTCTGTTGCCTTAAAACCCTTTGTC +
Preference number: 3 (lower is better)
Translates to: LFIASLSKVTTS*PTQSVALKPFV
Trigger: GACAAAGGGTTTTAAGGCAACAGACTGCGTGGGCCACGATGTAGTCACCTTACTAAGGGATGCGATAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 72 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTaGGGGACCAGGTCAAAATCAAACCATGCAAAGTGG +
Preference number: 3 (lower is better)
Translates to: HTLEMDATTLHT*GTRSKSNHAKW
Trigger: CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR GCA 72 bp CTTTTTGATGGCTTTGTTAAGCAGTTTGACCACATCTaGTCCTTCCACTCCGCTCGCTTTAAATCGCTTTGT +
Preference number: 3 (lower is better)
Translates to: LFDGFVKQFDHI*SFHSARFKSLC
Trigger: ACAAAGCGATTTAAAGCGAGCGGAGTGGAAGGAGCAGATGTGGTCAAACTGCTTAACAAAGCCATCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR CCA 72 bp AAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTaGTTGGTTCCTTTTATCCAAATGGAGACAAGACAC +
Preference number: 3 (lower is better)
Translates to: KAVGNSSDGIVC*LVPFIQMETRH
Trigger: GTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CCA 72 bp CTTTTCAGAGCCATCAGGAATGGACCTTACGAATGTTaGCAACATCTTGACTGTGGCTGTTGGATTAAAATC +
Preference number: 3 (lower is better)
Translates to: LFRAIRNGPYEC*QHLDCGCWIKI
Trigger: GATTTTAATCCAACAGCCACAGTCAAGATGTTGCCAACATTCGTAAGGTCCATTCCTGATGGCTCTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493591.6
3UTR TCA 72 bp ATTTTCCATCTCCAGCCAATAAATAACTCTGTTGGATaGATGCATACATTAGAAATGGATGCCACTACACTT +
Preference number: 3 (lower is better)
Translates to: IFHLQPINNSVG*MHTLEMDATTL
Trigger: AAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAGTTATTTATTGGCTGGAGATGGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCAGCCCTGGCGAGCCGTaGTCCTCCGGCGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRSPGEP*SSGGCS
Trigger: CGAGCAGCCGCCGGAGGACCACGGCTCGCCAGGGCT...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359426.7
ENST00000493591.6
CDS-3UTR GCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGGCCGGAACGCAAGGCTaGGGCCAGGACCAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSAGTQG*GQDQRR
Trigger: CCGCCGCTGGTCCTGGCCGCAGCCTTGCGTTCCGGC...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGCCACCGCCGTCACCATaGCAGCCCCCTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRPPPSP*QPPCRC
Trigger: GCAGCGGCAAGGGGGCTGCCATGGTGACGGCGGTGG...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCTGCGCCACACAGCTGTaGGGCCCTCCTGGACACCAC +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRCATQL*GPPGHH
Trigger: GTGGTGTCCAGGAGGGCCGCACAGCTGTGTGGCGCA...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGAACCGCAGCCATGCCTaGGCCACACAGCTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: ALAPASPSATRWEGRGSPNRSHA*ATQLCG
Trigger: GCCGCACAGCTGTGTGGCGCAGGCATGGCTGCGGTT...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGGCTGTGCGGCCCTCCTaGACACCACCCCGCACACTG +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSAVRPS*TPPRTL
Trigger: CAGTGTGCGGGGTGGTGTCCAGGAGGGCCGCACAGC...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCCCACAACCGCAGCCATaGCTGCGCCACACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRPQPQP*LRHTAV
Trigger: CACAGCTGTGTGGCGCAGGCATGGCTGCGGTTGTGG...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCCACACCACGATGCGATaGCAGGCCACAGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRHTTMR*QATVGA
Trigger: GGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTG...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCTCCGCAGCCTGGGTGTaGCCTTGTTATCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRSAAWV*PCYHAG
Trigger: GCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGA...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGAGCTGCTTGCCTCTGTaGGTAACCGCACGCCCACGG +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSSCLPL*VTARPR
Trigger: CCGTGGGCGTGCGGTTACGCACAGAGGCAAGCAGCT...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGAGATGGCGCCCAGTGTaGCAGCCACCAAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRRWRPV*QPPSWL
Trigger: CAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCT...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCGCAGCATGTCCTTGGTaGGGTGGAAATGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRAACPW*GGNEPG
Trigger: CCCTGGCTCATTTCCACCTCACCAAGGACATGCTGC...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGGCAGCATGTCCTTGGTaGGGTGGAAATGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALAPASPSATRWEGRGSPAACPW*GGNEPG
Trigger: CCCTGGCTCATTTCCACCTCACCAAGGACATGCTGC...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTGCTGCGCGGCGATCATaGTGGCGGTCGGGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRAARRS*WRSGSR
Trigger: CCGCGACCCCGACCGCCAGCATGATCGCCGCGCAGC...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359426.7
ENST00000493591.6
CDS-3UTR GCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTCTCGCCTTCAGGCAGTaGCCCCGGGAGGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRLAFRQ*PREGGP
Trigger: CGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAG...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTGGCGAAGGCTTTCCTTaGGCCCTGCAGTCCAACTCG +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGGEGFP*ALQSNS
Trigger: CGAGTTGGACTGCAGGGCGCAAGGAAAGCCTTCGCC...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTTACAGGGCAGGAACCTaGGATGCCACAGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGYRAGT*DATGGP
Trigger: TGGCCCACCTGTGGCATCCCAGGTTCCTGCCCTGTA...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS-3UTR CCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGAGATGGCGCCCAGTGTaGCAGCCACCAAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSRWRPV*QPPSWL
Trigger: CAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCT...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTGGAGAGGCAGTAGGCTaGGGATCCCGGACTCTTAGC +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGGEAVG*GSRTLS
Trigger: GCTAAGAGTCCGGGATCCCCAGCCTACTGCCTCTCC...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGAGGGAAATGAGAACGTaGAGCCCAGAGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRREMRT*SPEASW
Trigger: CCAGGATGCCTCTGGGCTTCACGTTCTCATTTCCCT...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCTGCTGGCAGGGAAATaGGAACGTGAAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSLLAGK*EREAQR
Trigger: CCTCTGGGCTTCACGTTCTCATTTCCCTGCCAGCAG...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTTGCCGGTCCCAACAATaGGTCCAACCTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGCRSQQ*VQPHRW
Trigger: CCACCTGTGAGGTTGGACTCATTGTTGGGACCGGCA...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGACCACGGCATTGTTGTaGGTCTGCTTCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSTTALL*VCFLSP
Trigger: GGGGCTGAGGAAGCAGACGCACAACAATGCCGTGGT...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCCTATTCAGACCTAGCTaGTGGAGGATAGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRLFRPS*WRIART
Trigger: GGTCCGGGCTATCCTCCAGCAGCTAGGTCTGAATAG...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTAGCTGCTTGCCTCTGTaGGTAACCGCACGCCCACGG +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSSCLPL*VTARPR
Trigger: CCGTGGGCGTGCGGTTACGCACAGAGGCAAGCAGCT...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCCCATTAGTTGGATTTTaGTTTCCTCCCCGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRPLVGF*FPPRAG
Trigger: GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTTGCAGTCCAACTCGATaGTGGCCCGGAGAAGGCCGG +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSCSPTR*WPGEGR
Trigger: CCGGCCTTCTCCGGGCCAGCATCGAGTTGGACTGCA...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGCCACCGCCGTCACCATaGCAGCCCCCTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQPPPSP*QPPCRC
Trigger: GCAGCGGCAAGGGGGCTGCCATGGTGACGGCGGTGG...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGCCACCGCCGTCACCATaGCAGCCCCCTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPAPPPSP*QPPCRC
Trigger: GCAGCGGCAAGGGGGCTGCCATGGTGACGGCGGTGG...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTCCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRPSATR*EGRGSP
Trigger: CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGG...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGCCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPAPSATR*EGRGSP
Trigger: CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGG...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGCCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGPSATR*EGRGSP
Trigger: CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGG...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGCCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQPSATR*EGRGSP
Trigger: CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGG...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTGCATCCTGGGGCCTTTaGTCCCCATGTAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGASWGL*SPCSPR
Trigger: TCTTGGACTACATGGGGATCAAAGGCCCCAGGATGC...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCATCCCTTAGTAAGGTaGCTACATCGTGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGHPLVR*LHRGPR
Trigger: GCGTGGGCCACGATGTAGTCACCTTACTAAGGGATG...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCAGTTTGACCACATCTaGTCCTTCCACTCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSQFDHI*SFHSAR
Trigger: GCGAGCGGAGTGGAAGGAGCAGATGTGGTCAAACTG...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTAGGGTCTCCTCTATCTaGCGGTGCTGCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSRVSSI*RCCSAK
Trigger: CTTGGCCGAGCAGCACCGGCAGATAGAGGAGACCCT...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTCCGTGGTCCGCAGCCTaGGTGTGCCCTTGTTATCAC +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSPWSAA*VCPCYH
Trigger: GTGATAACAAGGGCACACCCAGGCTGCGGACCACGG...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGGCTGTGCGGCCCTCCTaGACACCACCCCGCACACTG +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPAAVRPS*TPPRTL
Trigger: CAGTGTGCGGGGTGGTGTCCAGGAGGGCCGCACAGC...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGGCTGTGCGGCCCTCCTaGACACCACCCCGCACACTG +
Preference number: 4 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGAVRPS*TPPRTL
Trigger: CAGTGTGCGGGGTGGTGTCCAGGAGGGCCGCACAGC...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCCGGCTCACAAAGCGGTaGGAAATTCCAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRRLTKR*EIPVMA
Trigger: TGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCG...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTTTGGTGAGGTGGAAATaGGCCAGGGTCTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGLVRWK*ARVSSI
Trigger: GATAGAGGAGACCCTGGCTCATTTCCACCTCACCAA...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGTTGGTGAGGTGGAAATaGGCCAGGGTCTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSLVRWK*ARVSSI
Trigger: GATAGAGGAGACCCTGGCTCATTTCCACCTCACCAA...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTAACCCTTTGTCCACGTaGTCAAGATTCCCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGNPLST*SRFPRP
Trigger: TGGACGCGGGAATCTTGATCACGTGGACAAAGGGTT...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGCGGTCACTCTCGATCTaGGAGAGAAACTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRRSLSI*ERNLVS
Trigger: TGAGACCAAGTTTCTCTCTCAGATCGAGAGTGACCG...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGACGATTTTGTGGCATTaGCACACCACGATGCGATGC +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRTILWH*HTTMRC
Trigger: GCATCGCATCGTGGTGTGTCAATGCCACAAAATCGT...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGAAAGCTGGCTTCCACTaGCGTGCACGATGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSKAGFH*RARCSL
Trigger: CAGAGAACATCGTGCACGGCAGTGGAAGCCAGCTTT...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTAAAGCTGGCTTCCACTaGCGTGCACGATGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGKAGFH*RARCSL
Trigger: CAGAGAACATCGTGCACGGCAGTGGAAGCCAGCTTT...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCGCCCACGCAGTCTGTTaGCTTAAAACCCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRAHAVC*LKTLCP
Trigger: TGGACAAAGGGTTTTAAGGCAACAGACTGCGTGGGC...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTACTTGGTCTCAAAGATaGCCCGGGTCTTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGTWSQR*PGSSAS
Trigger: AGACGCTGAAGACCCGGGGCATCTTTGAGACCAAGT...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGAACCGCAGCCATGCCTaGGCCACACAGCTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQNRSHA*ATQLCG
Trigger: GCCGCACAGCTGTGTGGCGCAGGCATGGCTGCGGTT...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCACAGCTACGATGTTaGCATCATAGTCCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSPQLRC*HHSPLA
Trigger: AGCGAGGGGACTATGATGCCAACATCGTAGCTGTGG...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGGGGTCAGGATTTCTTTaGCATTGTGGAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALAPASPSATRWEGRGSPGSGFL*HCGGLP
Trigger: AGGAAGGCCTCCACAATGCCAAAGAAATCCTGACCC...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCTGGCAGCCACCAAGTTaGCTGAGCGAAATGAGACAA +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRWQPPS*LSEMRQ
Trigger: TTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCA...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTCGTCGACACCAACCGTaGTCCGCAGCCTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRRRHQP*SAAWVC
Trigger: GCACACCCAGGCTGCGGACCACGGTTGGTGTCGACG...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGACGCCGGGAATACTGTaGGTGCGTCTTGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRTPGIL*VRLVKR
Trigger: TCTCTTTACAAGACGCACCCACAGTATTCCCGGCGT...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGAGATGTTTCAGGGGCTaGCCTGTCCAAACACAGCAA +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRRCFRG*PVQTQQ
Trigger: TTGCTGTGTTTGGACAGGCCAGCCCCTGAAACATCT...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGAGTCCAACTCGATGCTaGCCCGGAGAAGGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPASPTRC*PGEGRA
Trigger: CGCCCGGCCTTCTCCGGGCCAGCATCGAGTTGGACT...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCTCCCCATTCTGTATTaGTACACATCCTCCCCTCGT +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSLPILY*YTSSPR
Trigger: ACGAGGGGAGGATGTGTATCAATACAGAATGGGGAG...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTGCATCCTGGGGCCTTTaGTCCCCATGTAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSASWGL*SPCSPR
Trigger: TCTTGGACTACATGGGGATCAAAGGCCCCAGGATGC...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGTCAACAGCTGGGTCTTaGACGCCTTTGCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRSTAGS*TPLLVL
Trigger: AAGAACAAGCAAAGGCGTTCAAGACCCAGCTGTTGA...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR GCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGCCACAACCGCAGCCATaGCTGCGCCACACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGPQPQP*LRHTAV
Trigger: CACAGCTGTGTGGCGCAGGCATGGCTGCGGTTGTGG...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGTCCTTCACCGTCTGGTaGATGATTCTGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: ALAPASPSATRWEGRGSPSFTVW*MILEKC
Trigger: ACACTTCTCCAGAATCATGCACCAGACGGTGAAGGA...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTAGCTGCTTGCCTCTGTaGGTAACCGCACGCCCACGG +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRSCLPL*VTARPR
Trigger: CCGTGGGCGTGCGGTTACGCACAGAGGCAAGCAGCT...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGCTTGACTGTGGCTGTTaGATTAAAATCCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRLDCGC*IKIPGE
Trigger: CTCTCCCGGGATTTTAATCCAACAGCCACAGTCAAG...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCCTTGACTGTGGCTGTTaGATTAAAATCCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRLDCGC*IKIPGE
Trigger: CTCTCCCGGGATTTTAATCCAACAGCCACAGTCAAG...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCTTGACTGTGGCTGTTaGATTAAAATCCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ALAPASPSATRWEGRGSPLDCGC*IKIPGE
Trigger: CTCTCCCGGGATTTTAATCCAACAGCCACAGTCAAG...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGCAGAGCCATCAGGAATaGACCTTACGAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRQSHQE*TLRMLA
Trigger: TGCCAACATTCGTAAGGTCCATTCCTGATGGCTCTG...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGGTGCACGATGTTCTCTaGGGTGTCATAAACCTCGGA +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSVHDVL*GVINLG
Trigger: TCCGAGGTTTATGACACCCCAGAGAACATCGTGCAC...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCAGCGAAATGAGACAATaGTGCAAACGTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRSEMRQ*CKRAGL
Trigger: CAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCT...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGTGGCAGCCACCAAGTTaGCTGAGCGAAATGAGACAA +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSWQPPS*LSEMRQ
Trigger: TTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCA...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGGCAGGCGGTTCAAGATaGCGCCCAGTGTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPAAGGSR*RPVWQP
Trigger: TGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGC...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCACCACCGCCGTCACCATaGCAGCCCCCTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPPPPSP*QPPCRC
Trigger: GCAGCGGCAAGGGGGCTGCCATGGTGACGGCGGTGG...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCACTACACTTCACACGTaGGGGACCAGGTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRTTLHT*GTRSKS
Trigger: TGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGAGAAGGCCTGTCAGGTaGTGTGATTTTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: ALAPASPSATRWEGRGSPRRPVR*CDFPSP
Trigger: TGGAGATGGAAAATCACACCACCTGACAGGCCTTCT...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTGTAGCCGATTCTCGCTaGCAGATCTGCCCCATTGTG +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSVADSR*QICPIV
Trigger: CACAATGGGGCAGATCTGCCAGCGAGAATCGGCTAC...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTAGGCACTCAGCAACATaGTCAAAAAGCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGRHSAT*SKSWLP
Trigger: TGGAAGCCAGCTTTTTGATCATGTTGCTGAGTGCCT...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTTTGGTGAGGTGGAAATaGGCCAGGGTCTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSLVRWK*ARVSSI
Trigger: GATAGAGGAGACCCTGGCTCATTTCCACCTCACCAA...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGAATCCCTTCTTGGTaGAGTCGATTAAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRGIPSW*SRLRCC
Trigger: GCAACATCTTAATCGACTTCACCAAGAAGGGATTCC...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCGGTGGGAAATTCCAGTaGTGGCATTGTTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRGGKFQ*WHCLLV
Trigger: AACCAACAAACAATGCCATCACTGGAATTTCCCACC...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGGGTGGGAAATTCCAGTaGTGGCATTGTTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: ALAPASPSATRWEGRGSPGGKFQ*WHCLLV
Trigger: AACCAACAAACAATGCCATCACTGGAATTTCCCACC...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGGAAATGAGACAATGGTaGAAACGTGCTGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: ALAPASPSATRWEGRGSPEMRQW*KRAGLR
Trigger: TCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGTCTTCCCCAGTGCCCTaGATGATTTCAATAGGAATG +
Preference number: 4 (lower is better)
Translates to: ALAPASPSATRWEGRGSPSSPVP*MISIGM
Trigger: CATTCCTATTGAAATCATGCAGGGCACTGGGGAAGA...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGCCACAACCGCAGCCATaGCTGCGCCACACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWPQPQP*LRHTAV
Trigger: CACAGCTGTGTGGCGCAGGCATGGCTGCGGTTGTGG...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTTCCTTCACCGTCTGGTaGATGATTCTGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGSFTVW*MILEKC
Trigger: ACACTTCTCCAGAATCATGCACCAGACGGTGAAGGA...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACCTCGCCTTCAGGCAGTaGCCCCGGGAGGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHLAFRQ*PREGGP
Trigger: CGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAG...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCCCTTCTCAGGAACAATaGTCTGGGGAACAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRPSQEQ*SGEQFF
Trigger: AAAGAACTGTTCCCCAGAGCATTGTTCCTGAGAAGG...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGTCGGGTCCTTTCTTCTaGTTTTCTACTCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRSGPFF*FSTLNS
Trigger: GCTGTTGAGAGTAGAAAAGCAGAAGAAAGGACCCGA...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTATGGTGCAAACGTGCTaGACTGAGACACAGTCATCA +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGMVQTC*TETQSS
Trigger: TGATGACTGTGTCTCAGTCCAGCACGTTTGCACCAT...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTAGCGAAATGAGACAATaGTGCAAACGTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGSEMRQ*CKRAGL
Trigger: CAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCT...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGGCAGGCGGTTCAAGATaGCGCCCAGTGTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWAGGSR*RPVWQP
Trigger: TGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGC...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGCAGGCGGTTCAAGATaGCGCCCAGTGTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: EEAANAMPTLAFRQCPREAGGSR*RPVWQP
Trigger: TGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGC...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTATCGCTTTGTCCAGGTaGTCAGGATGGCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSIALSR*SGWPHL
Trigger: TAGATGAGGCCATCCTGATCACCTGGACAAAGCGAT...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGGCAGCATGTCCTTGGTaGGGTGGAAATGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPAAACPW*GGNEPG
Trigger: CCCTGGCTCATTTCCACCTCACCAAGGACATGCTGC...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGCTGCTGGCAGGGAAATaGGAACGTGAAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQLLAGK*EREAQR
Trigger: CCTCTGGGCTTCACGTTCTCATTTCCCTGCCAGCAG...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTCTGCTGGCAGGGAAATaGGAACGTGAAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRLLAGK*EREAQR
Trigger: CCTCTGGGCTTCACGTTCTCATTTCCCTGCCAGCAG...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGGGAATCCCTTCTTGGTaGAGTCGATTAAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSGIPSW*SRLRCC
Trigger: GCAACATCTTAATCGACTTCACCAAGAAGGGATTCC...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGCCCCGCACACTGTCTTaGCGAGGATACTGTCATCGC +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPAPRTLS*RGYCHR
Trigger: GCGATGACAGTATCCTCGTCAAGACAGTGTGCGGGG...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTGAAATGAGACAATGGTaGAAACGTGCTGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGEMRQW*KRAGLR
Trigger: TCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTGCCCACGCAGTCTGTTaGCTTAAAACCCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSAHAVC*LKTLCP
Trigger: TGGACAAAGGGTTTTAAGGCAACAGACTGCGTGGGC...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCATGCGCCACACAGCTGTaGGGCCCTCCTGGACACCAC +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPCATQL*GPPGHH
Trigger: GTGGTGTCCAGGAGGGCCGCACAGCTGTGTGGCGCA...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCCTCGCCTTCAGGCAGTaGCCCCGGGAGGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGLAFRQ*PREGGP
Trigger: CGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAG...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGTCCTTGTTGCATGGTTaGTGGTCTTGCCTATTAAAC +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRSLLHG*WSCLLN
Trigger: GTTTAATAGGCAAGACCAGCAACCATGCAACAAGGA...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR GCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGGGTCTTGAACGCCTTTaGTTGTTCTTCATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSGLERL*LFFIWA
Trigger: AGCCCAAATGAAGAACAAGCAAAGGCGTTCAAGACC...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR GCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGTCTCGCTGGCAGATCTaGCCCATTGTGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EEAANAMPTLAFRQCPRESRWQI*PIVGRA
Trigger: TGCCCTCCCCACAATGGGGCAGATCTGCCAGCGAGA...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGCCGTGGTCCGCAGCCTaGGTGTGCCCTTGTTATCAC +
Preference number: 4 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREPWSAA*VCPCYH
Trigger: GTGATAACAAGGGCACACCCAGGCTGCGGACCACGG...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGGGAGAGGCAGTAGGCTaGGGATCCCGGACTCTTAGC +
Preference number: 4 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWGEAVG*GSRTLS
Trigger: GCTAAGAGTCCGGGATCCCCAGCCTACTGCCTCTCC...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCACCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAPSATR*EGRGSP
Trigger: CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGG...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTTCTACTCTCAACAGCTaGGTCTTGAACGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSSTLNS*VLNALS
Trigger: GGACAGTGCGTTCAAGACCCAGCTGTTGAGAGTAGA...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436817.6
ENST00000643399.2
3UTR CAA 72 bp TCGACACCAACCGTGGTCCGCAGCCTGGGTGTGCCCTaGTTATCACGCAGGCGGTTCAAGATGGCGCCCAGT +
Preference number: 4 (lower is better)
Translates to: STPTVVRSLGVP*LSRRRFKMAPS
Trigger: ACTGGGCGCCATCTTGAACCGCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGACCACGGTTGGTGTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTCAAGATCCAGGGCAATaGAATCTCCCTTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSQDPGQ*NLPFQS
Trigger: GCTCTGAAAAGGGAGATTTCATTGCCCTGGATCTTG...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACGTGCTGGACTGAGACACAGTCATCATCGGACGGCTCCACTCCCAGGCGGGTCTGGTGCCAGTGCCGATaGTCAGGCCGACTTCACAGT +
Preference number: 4 (lower is better)
Translates to: TCWTETQSSSDGSTPRRVWCQCR*SGRLHS
Trigger: ACTGTGAAGTCGGCCTGATCATCGGCACTGGCACCA...GACCCGCCTGGGAGTGGAGCCGTCCGATGATGACTGTGTCTCAGTCCAGCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGTGGTGCCAGTGCCGATaGTCAGGCCGACTTCACAGT +
Preference number: 4 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREWCQCR*SGRLHS
Trigger: ACTGTGAAGTCGGCCTGATCATCGGCACTGGCACCA...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGATTCTTTTCGATGGCTaGCACATCACTGGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGRILFDG*HITGVK
Trigger: TTTAACACCAGTGATGTGTCAGCCATCGAAAAGAAT...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGGCAGCATGTCCTTGGTaGGGTGGAAATGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWAACPW*GGNEPG
Trigger: CCCTGGCTCATTTCCACCTCACCAAGGACATGCTGC...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGGCATCCTGGGGCCTTTaGTCCCCATGTAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPAASWGL*SPCSPR
Trigger: TCTTGGACTACATGGGGATCAAAGGCCCCAGGATGC...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGAGGGAAATGAGAACGTaGAGCCCAGAGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQREMRT*SPEASW
Trigger: CCAGGATGCCTCTGGGCTTCACGTTCTCATTTCCCT...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGCCCCGCACACTGTCTTaGCGAGGATACTGTCATCGC +
Preference number: 4 (lower is better)
Translates to: EEAANAMPTLAFRQCPREPRTLS*RGYCHR
Trigger: GCGATGACAGTATCCTCGTCAAGACAGTGTGCGGGG...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGCCCCAGTGCATTCCCTaGCCTGGAAAGCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREPQCIP*PGKQTQ
Trigger: CTGAGTCTGCTTTCCAGGTCAGGGAATGCACTGGGG...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGACCACGGCATTGTTGTaGGTCTGCTTCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EEAANAMPTLAFRQCPRETTALL*VCFLSP
Trigger: GGGGCTGAGGAAGCAGACGCACAACAATGCCGTGGT...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTAGCGTCTCAGAGATCTaGCCTCGGAAGAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRSVSEI*PRKRNP
Trigger: GGGATTCCTCTTCCGAGGGCAGATCTCTGAGACGCT...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGAGCGTCTCAGAGATCTaGCCTCGGAAGAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGSVSEI*PRKRNP
Trigger: GGGATTCCTCTTCCGAGGGCAGATCTCTGAGACGCT...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTCCCGGACTCTTAGCTaGTTGCCTCTGTGCGTAACC +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPASRTLS*LPLCVT
Trigger: GGTTACGCACAGAGGCAAGCAGCTAAGAGTCCGGGA...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCTCGCCTTCAGGCAGTaGCCCCGGGAGGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWLAFRQ*PREGGP
Trigger: CGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAG...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTCAGAGCCATCAGGAATaGACCTTACGAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSQSHQE*TLRMLA
Trigger: TGCCAACATTCGTAAGGTCCATTCCTGATGGCTCTG...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCCCACCGCCGTCACCATaGCAGCCCCCTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGPPPSP*QPPCRC
Trigger: GCAGCGGCAAGGGGGCTGCCATGGTGACGGCGGTGG...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGAGGATAGCCCGGACCTaGAGCAGTGCTAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPARIART*SSANRS
Trigger: TGACCGATTAGCACTGCTCCAGGTCCGGGCTATCCT...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCCCCAGCGCAACTCGCTaGGAGGGTAGGGGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGPSATR*EGRGSP
Trigger: CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGG...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCACAGGGTTCCAGTCGCTaGAGGCCGCAGGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAQGSSR*RPQGTR
Trigger: CCTGGTGCCCTGCGGCCTCCAGCGACTGGAACCCTG...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643399.2
CDS-3UTR TCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGAAGGAAAAGAAAACGTaGATCCCACAGGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSKEKKT*IPQVTS
Trigger: AGAAGTTACCTGTGGGATTCACGTTTTCTTTTCCTT...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTCCTCCTTGGCCATCTTaGCTAGGATCAGTCGAACCA +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRPPWPS*LGSVEP
Trigger: TGGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGG...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGCCTCCTTGGCCATCTTaGCTAGGATCAGTCGAACCA +
Preference number: 4 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGPPWPS*LGSVEP
Trigger: TGGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGG...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGCCTCCTTGGCCATCTTaGCTAGGATCAGTCGAACCA +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPAPPWPS*LGSVEP
Trigger: TGGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGG...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGCATCCCTTAGTAAGGTaGCTACATCGTGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREHPLVR*LHRGPR
Trigger: GCGTGGGCCACGATGTAGTCACCTTACTAAGGGATG...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTGGTGGGAAATTCCAGTaGTGGCATTGTTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSGGKFQ*WHCLLV
Trigger: AACCAACAAACAATGCCATCACTGGAATTTCCCACC...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCTTTCAGCAAGTAGATaGAGTTTTGGTTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ALAPASPSATRWEGRGSPLSASR*SFGFSA
Trigger: AGCTGAAAAACCAAAACTTCATCTACTTGCTGAAAG...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGAAAGCTGGCTTCCACTaGCGTGCACGATGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGKAGFH*RARCSL
Trigger: CAGAGAACATCGTGCACGGCAGTGGAAGCCAGCTTT...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGCAGTTTGACCACATCTaGTCCTTCCACTCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: EEAANAMPTLAFRQCPREQFDHI*SFHSAR
Trigger: GCGAGCGGAGTGGAAGGAGCAGATGTGGTCAAACTG...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTGAAATGAGACAATGGTaGAAACGTGCTGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSEMRQW*KRAGLR
Trigger: TCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAAGGGTCTCCTCTATCTaGCGGTGCTGCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPRVSSI*RCCSAK
Trigger: CTTGGCCGAGCAGCACCGGCAGATAGAGGAGACCCT...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCACTCGCCTTCAGGCAGTaGCCCCGGGAGGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVALAFRQ*PREGGP
Trigger: CGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAG...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTAACATACACTGTCCTTaGAATCCAACTGTGGATTCT +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGNIHCP*NPTVDS
Trigger: AGAATCCACAGTTGGATTGCAAGGACAGTGTATGTT...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR CCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCATTTCTTTGGCATTGTaGAGGCCTTCCTTATTCTTT +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRISLAL*RPSLFF
Trigger: AAAGAATAAGGAAGGCCTCCACAATGCCAAAGAAAT...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGCAGGCGGTTCAAGATaGCGCCCAGTGTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPAGGSR*RPVWQP
Trigger: TGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGC...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGAAGGTGACTACATCGTaGCCCACGCAGTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: EEAANAMPTLAFRQCPREKVTTS*PTQSVA
Trigger: GGCAACAGACTGCGTGGGCCACGATGTAGTCACCTT...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAGCTGTGCGGCCCTCCTaGACACCACCCCGCACACTG +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPAVRPS*TPPRTL
Trigger: CAGTGTGCGGGGTGGTGTCCAGGAGGGCCGCACAGC...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGGAGAGGCAGTAGGCTaGGGATCCCGGACTCTTAGC +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPGEAVG*GSRTLS
Trigger: GCTAAGAGTCCGGGATCCCCAGCCTACTGCCTCTCC...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGATATATACCATTAGTTaGATTTTGCTTTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: ALAPASPSATRWEGRGSPIYTIS*ILLSSP
Trigger: CGGGGAGGAAAGCAAAATCCAACTAATGGTATATAT...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGTCCTCCGCAGCCCTaGCGAGCCGTGGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVAGPPQP*RAVVLR
Trigger: CCGGAGGACCACGGCTCGCCAGGGCTGCGGAGGACC...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359426.7
ENST00000493591.6
CDS-3UTR CCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCGCATTGTTTGTTGGTTaGTTCCTTTTATCCAAATGG +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRALFVG*FLLSKW
Trigger: CCATTTGGATAAAAGGAACCAACCAACAAACAATGC...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCGATGGCATTGTTTGTTaGTTGGTTCCTTTTATCCAA +
Preference number: 4 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRDGIVC*LVPFIQ
Trigger: TTGGATAAAAGGAACCAACCAACAAACAATGCCATC...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGTTGTTGCATGGTTGCTaGTCTTGCCTATTAAACTTT +
Preference number: 4 (lower is better)
Translates to: ALAPASPSATRWEGRGSPLLHGC*SCLLNF
Trigger: AAAGTTTAATAGGCAAGACCAGCAACCATGCAACAA...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR TCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGCTCCCCATTCTGTATTaGTACACATCCTCCCCTCGT +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQLPILY*YTSSPR
Trigger: ACGAGGGGAGGATGTGTATCAATACAGAATGGGGAG...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGCCTCCTTGGCCATCTTaGCTAGGATCAGTCGAACCA +
Preference number: 4 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWPPWPS*LGSVEP
Trigger: TGGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGG...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTGTCGTAGTGTGTCCTaGTATCATCCAGACACCCGT +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQCRSVS*YHPDTR
Trigger: ACGGGTGTCTGGATGATATCAGGACACACTACGACA...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTTGTCGTAGTGTGTCCTaGTATCATCCAGACACCCGT +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRCRSVS*YHPDTR
Trigger: ACGGGTGTCTGGATGATATCAGGACACACTACGACA...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCACCCCGCACACTGTCTTaGCGAGGATACTGTCATCGC +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPPRTLS*RGYCHR
Trigger: GCGATGACAGTATCCTCGTCAAGACAGTGTGCGGGG...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTGGCAAACTCAGGCTGTaGTCACAGTCCATCTGGATA +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRGKLRL*SQSIWI
Trigger: TATCCAGATGGACTGTGAGCACAGCCTGAGTTTGCC...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS-3UTR GCA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGAAAGCTGGCTTCCACTaGCGTGCACGATGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWKAGFH*RARCSL
Trigger: CAGAGAACATCGTGCACGGCAGTGGAAGCCAGCTTT...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAACCACGGCATTGTTGTaGGTCTGCTTCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPTTALL*VCFLSP
Trigger: GGGGCTGAGGAAGCAGACGCACAACAATGCCGTGGT...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCATGCGCCACACAGCTGTaGGGCCCTCCTGGACACCAC +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPCATQL*GPPGHH
Trigger: GTGGTGTCCAGGAGGGCCGCACAGCTGTGTGGCGCA...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAAACCGCAGCCATGCCTaGGCCACACAGCTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPNRSHA*ATQLCG
Trigger: GCCGCACAGCTGTGTGGCGCAGGCATGGCTGCGGTT...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGAAGCAGCTAATGCTATaGCCACACTCGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWKQLML*PHSPSG
Trigger: GCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTATTTCTTTGGCATTGTaGAGGCCTTCCTTATTCTTT +
Preference number: 4 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGISLAL*RPSLFF
Trigger: AAAGAATAAGGAAGGCCTCCACAATGCCAAAGAAAT...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTGGGTCAGGATTTCTTTaGCATTGTGGAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRGSGFL*HCGGLP
Trigger: AGGAAGGCCTCCACAATGCCAAAGAAATCCTGACCC...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTGGCAGCCACCAAGTTaGCTGAGCGAAATGAGACAA +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPAWQPPS*LSEMRQ
Trigger: TTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCA...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCGCTGTGCGGCCCTCCTaGACACCACCCCGCACACTG +
Preference number: 4 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGAVRPS*TPPRTL
Trigger: CAGTGTGCGGGGTGGTGTCCAGGAGGGCCGCACAGC...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGAGCCCTGGCGAGCCGTaGTCCTCCGGCGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LYPTIYTISWILLSSPRRSPGEP*SSGGCS
Trigger: CGAGCAGCCGCCGGAGGACCACGGCTCGCCAGGGCT...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359426.7
ENST00000493591.6
CDS-3UTR CCA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGGATGGCATTGTTTGTTaGTTGGTTCCTTTTATCCAA +
Preference number: 4 (lower is better)
Translates to: QALAPASPSATRWEGRGSDGIVC*LVPFIQ
Trigger: TTGGATAAAAGGAACCAACCAACAAACAATGCCATC...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGAACAGTTCTTTAGTTaGTTAGTTGAAGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RRQALAPASPSATRWEGREQFFS*LVEVLV
Trigger: AACAAGGACTTCAACTAACCAACTAAAGAACTGTTC...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR TCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCACATCCCTTAGTAAGGTaGCTACATCGTGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPHPLVR*LHRGPR
Trigger: GCGTGGGCCACGATGTAGTCACCTTACTAAGGGATG...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTCACGTTACATTTTGGTaGCAGTTCCTTCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRHVTFW*QFLHRL
Trigger: CAGACGGTGAAGGAACTGTCACCAAAATGTAACGTG...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGACGATTTTGTGGCATTaGCACACCACGATGCGATGC +
Preference number: 4 (lower is better)
Translates to: KQLMLCPHSPSGSAPGRETILWH*HTTMRC
Trigger: GCATCGCATCGTGGTGTGTCAATGCCACAAAATCGT...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTCAACAGCTGGGTCTTaGACGCCTTTGCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQSTAGS*TPLLVL
Trigger: AAGAACAAGCAAAGGCGTTCAAGACCCAGCTGTTGA...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR GCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGACAATGGTGCAAACGTaGTGGACTGAGACACAGTCA +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQTMVQT*WTETQS
Trigger: TGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGT...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGTCCGCAGCCTGGGTGTaGCCTTGTTATCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALSAAWV*PCYHAG
Trigger: GCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGA...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGAACCGCAGCCATGCCTaGGCCACACAGCTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWNRSHA*ATQLCG
Trigger: GCCGCACAGCTGTGTGGCGCAGGCATGGCTGCGGTT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCACCACAACCGCAGCCATaGCTGCGCCACACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPPQPQP*LRHTAV
Trigger: CACAGCTGTGTGGCGCAGGCATGGCTGCGGTTGTGG...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGCTTGACTGTGGCTGTTaGATTAAAATCCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQLDCGC*IKIPGE
Trigger: CTCTCCCGGGATTTTAATCCAACAGCCACAGTCAAG...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGGGACCTTACGAATGTTaGCAACATCTTGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPAGPYEC*QHLDCG
Trigger: GCCACAGTCAAGATGTTGCCAACATTCGTAAGGTCC...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGTGCACGATGTTCTCTaGGGTGTCATAAACCTCGGA +
Preference number: 4 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREVHDVL*GVINLG
Trigger: TCCGAGGTTTATGACACCCCAGAGAACATCGTGCAC...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGATGGTGCAAACGTGCTaGACTGAGACACAGTCATCA +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQMVQTC*TETQSS
Trigger: TGATGACTGTGTCTCAGTCCAGCACGTTTGCACCAT...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGATGGTGCAAACGTGCTaGACTGAGACACAGTCATCA +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPAMVQTC*TETQSS
Trigger: TGATGACTGTGTCTCAGTCCAGCACGTTTGCACCAT...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAGCAGGCGGTTCAAGATaGCGCCCAGTGTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPAGGSR*RPVWQP
Trigger: TGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGC...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCACCGTGGTCCGCAGCCTaGGTGTGCCCTTGTTATCAC +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAPWSAA*VCPCYH
Trigger: GTGATAACAAGGGCACACCCAGGCTGCGGACCACGG...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATCGTCGACACCAACCGTaGTCCGCAGCCTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYRRHQP*SAAWVC
Trigger: GCACACCCAGGCTGCGGACCACGGTTGGTGTCGACG...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCCGTCGACACCAACCGTaGTCCGCAGCCTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGRRHQP*SAAWVC
Trigger: GCACACCCAGGCTGCGGACCACGGTTGGTGTCGACG...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCGTCGACACCAACCGTaGTCCGCAGCCTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGRRHQP*SAAWVC
Trigger: GCACACCCAGGCTGCGGACCACGGTTGGTGTCGACG...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGCGCCTTAGAGTCTTGTaGAAACGCCGGGAATACTGT +
Preference number: 4 (lower is better)
Translates to: EEAANAMPTLAFRQCPRERLRVL*KRREYC
Trigger: ACAGTATTCCCGGCGTTTCCACAAGACTCTAAGGCG...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGTCCAACCTCACAGGTaGGCTCCTCATAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPVQPHR*APHKHR
Trigger: CCTGTGCTTATGAGGAGCCCACCTGTGAGGTTGGAC...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAAATGAGACAATGGTGCAAACGTGCTGGACTGAGACACAGTCATCATCGGACGGCTGTGCGGCCCTCCTaGACACCACCCCGCACACTG +
Preference number: 4 (lower is better)
Translates to: EMRQWCKRAGLRHSHHRTAVRPS*TPPRTL
Trigger: CAGTGTGCGGGGTGGTGTCCAGGAGGGCCGCACAGC...CGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGGCTGTGCGGCCCTCCTaGACACCACCCCGCACACTG +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLAVRPS*TPPRTL
Trigger: CAGTGTGCGGGGTGGTGTCCAGGAGGGCCGCACAGC...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTAGTTCCTTCACCGTCTaGTGCATGATTCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRSSFTV*CMILEK
Trigger: CTTCTCCAGAATCATGCACCAGACGGTGAAGGAACT...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGAGTTCCTTCACCGTCTaGTGCATGATTCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGSSFTV*CMILEK
Trigger: CTTCTCCAGAATCATGCACCAGACGGTGAAGGAACT...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAGGAGAGGCAGTAGGCTaGGGATCCCGGACTCTTAGC +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAGEAVG*GSRTLS
Trigger: GCTAAGAGTCCGGGATCCCCAGCCTACTGCCTCTCC...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGACTACACTTCACACGTaGGGGACCAGGTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGTTLHT*GTRSKS
Trigger: TGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGGTGTGGGTAGGTGTTTaGACTCTTTTCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQVWVGV*TLFLLR
Trigger: CCTGAGAAGGAAAAGAGTCCAAACACCTACCCACAC...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGTAGCCGATTCTCGCTaGCAGATCTGCCCCATTGTG +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPVADSR*QICPIV
Trigger: CACAATGGGGCAGATCTGCCAGCGAGAATCGGCTAC...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGACCTCGGACTCCATGTaGACATTCTGGTTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQTSDSM*TFWFFS
Trigger: TGAGAAAAACCAGAATGTTCACATGGAGTCCGAGGT...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTACCTCGGACTCCATGTaGACATTCTGGTTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRTSDSM*TFWFFS
Trigger: TGAGAAAAACCAGAATGTTCACATGGAGTCCGAGGT...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGAGGCACTCAGCAACATaGTCAAAAAGCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWRHSAT*SKSWLP
Trigger: TGGAAGCCAGCTTTTTGATCATGTTGCTGAGTGCCT...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AAGAGATCCGTCGACACCAACCGTGGTCCGCAGCCTGGGTGTGCCCTTGTTATCCCTCCTTGGCCATCTTaGCTAGGATCAGTCGAACCA +
Preference number: 4 (lower is better)
Translates to: KRSVDTNRGPQPGCALVIPPWPS*LGSVEP
Trigger: TGGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGG...GATAACAAGGGCACACCCAGGCTGCGGACCACGGTTGGTGTCGACGGATCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACCTGCTGGCAGGGAAATaGGAACGTGAAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHLLAGK*EREAQR
Trigger: CCTCTGGGCTTCACGTTCTCATTTCCCTGCCAGCAG...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGGGAATCCCTTCTTGGTaGAGTCGATTAAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGGIPSW*SRLRCC
Trigger: GCAACATCTTAATCGACTTCACCAAGAAGGGATTCC...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACCCCCGCACACTGTCTTaGCGAGGATACTGTCATCGC +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHPRTLS*RGYCHR
Trigger: GCGATGACAGTATCCTCGTCAAGACAGTGTGCGGGG...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACGTGCTGGACTGAGACACAGTCATCATCGGACGGCTCCACTCCCAGGCGGGTCCACGTTACATTTTGGTaGCAGTTCCTTCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: TCWTETQSSSDGSTPRRVHVTFW*QFLHRL
Trigger: CAGACGGTGAAGGAACTGTCACCAAAATGTAACGTG...GACCCGCCTGGGAGTGGAGCCGTCCGATGATGACTGTGTCTCAGTCCAGCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR GCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGGAAATGAGACAATGGTaGAAACGTGCTGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGEMRQW*KRAGLR
Trigger: TCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGAGTCGATTAAGATGTTaGGGACGATTTCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQSRLRC*GRFHPG
Trigger: ACCTGGGTGAAATCGTCCGCAACATCTTAATCGACT...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAACTTGGTCTCAAAGATaGCCCGGGTCTTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPTWSQR*PGSSAS
Trigger: AGACGCTGAAGACCCGGGGCATCTTTGAGACCAAGT...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGTACTGTCATCGCAGGTaGTATTCAGACCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWYCHRR*YSDLAA
Trigger: AGCAGCTAGGTCTGAATAGCACCTGCGATGACAGTA...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGTACTGTCATCGCAGGTaGTATTCAGACCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREYCHRR*YSDLAA
Trigger: AGCAGCTAGGTCTGAATAGCACCTGCGATGACAGTA...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGAACCGCAGCCATGCCTaGGCCACACAGCTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRNRSHA*ATQLCG
Trigger: GCCGCACAGCTGTGTGGCGCAGGCATGGCTGCGGTT...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGAACCGCAGCCATGCCTaGGCCACACAGCTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLNRSHA*ATQLCG
Trigger: GCCGCACAGCTGTGTGGCGCAGGCATGGCTGCGGTT...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTGGACACCACCCCGCACACTGTCTTGACGAGGATACTGTCATCGCAGGTGCTACCATTAGTTGGATTTTaGTTTCCTCCCCGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LDTTPHTVLTRILSSQVLPLVGF*FPPRAG
Trigger: GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG...TAGCACCTGCGATGACAGTATCCTCGTCAAGACAGTGTGCGGGGTGGTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR GCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCGCTGCGCGGCGATCATaGTGGCGGTCGGGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVAARRS*WRSGSR
Trigger: CCGCGACCCCGACCGCCAGCATGATCGCCGCGCAGC...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359426.7
ENST00000493591.6
CDS-3UTR GCA 90 bp CTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCCACACCACGATGCGATaGCAGGCCACAGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LQYIPLVGFCFPPRAGRPHTTMR*QATVGA
Trigger: GGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTG...GGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGCCTTCTCAGGAACAATaGTCTGGGGAACAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPAPSQEQ*SGEQFF
Trigger: AAAGAACTGTTCCCCAGAGCATTGTTCCTGAGAAGG...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGCCTTCTCAGGAACAATaGTCTGGGGAACAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQPSQEQ*SGEQFF
Trigger: AAAGAACTGTTCCCCAGAGCATTGTTCCTGAGAAGG...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTCGGGTCCTTTCTTCTaGTTTTCTACTCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQSGPFF*FSTLNS
Trigger: GCTGTTGAGAGTAGAAAAGCAGAAGAAAGGACCCGA...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCTCTCGCTGGCAGATCTaGCCCATTGTGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGSRWQI*PIVGRA
Trigger: TGCCCTCCCCACAATGGGGCAGATCTGCCAGCGAGA...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTTTTTGGTTTTTCAGCTaGTGTAGCCGATTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRFWFFS*CSRFSL
Trigger: CAGCGAGAATCGGCTACAGCAGCTGAAAAACCAAAA...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCCTGGGATGCCACAGGTaGGCCATCTTGCCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGLGCHR*AILPSV
Trigger: GACACTGGGCAAGATGGCCCACCTGTGGCATCCCAG...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS-3UTR CCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAAGATGGCGCCCAGTGTaGCAGCCACCAAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPRWRPV*QPPSWL
Trigger: CAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCT...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGGCAGGCGGTTCAAGATaGCGCCCAGTGTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGAGGSR*RPVWQP
Trigger: TGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGC...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCGTCGACACCAACCGTaGTCCGCAGCCTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRRRHQP*SAAWVC
Trigger: GCACACCCAGGCTGCGGACCACGGTTGGTGTCGACG...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGAGAAGGCCTGTCAGGTaGTGTGATTTTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWRRPVR*CDFPSP
Trigger: TGGAGATGGAAAATCACACCACCTGACAGGCCTTCT...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGTCTACTCTCAACAGCTaGGTCTTGAACGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: KQLMLCPHSPSGSAPGRESTLNS*VLNAFA
Trigger: AGCAAAGGCGTTCAAGACCCAGCTGTTGAGAGTAGA...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
3UTR CAA 72 bp CTAGGACTGGTTCCACGGACACACGATTTTGTGGCATaGACACACCACGATGCGATGCCAGGCCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LGLVPRTHDFVA*THHDAMPGHSG
Trigger: CCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CAA 72 bp CGGTTCAAGATGGCGCCCAGTGTGGCAGCCACCAAGTaGGCTGAGCGAAATGAGACAATGGTGCAAACGTGC +
Preference number: 4 (lower is better)
Translates to: RFKMAPSVAATK*AERNETMVQTC
Trigger: GCACGTTTGCACCATTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCTTGAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCATGGTGCCAGTGCCGATaGTCAGGCCGACTTCACAGT +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPWCQCR*SGRLHS
Trigger: ACTGTGAAGTCGGCCTGATCATCGGCACTGGCACCA...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCACCTCCTTGGCCATCTTaGCTAGGATCAGTCGAACCA +
Preference number: 4 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPPPWPS*LGSVEP
Trigger: TGGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGG...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAAGGGAAATGAGAACGTaGAGCCCAGAGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAREMRT*SPEASW
Trigger: CCAGGATGCCTCTGGGCTTCACGTTCTCATTTCCCT...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACAGGGAAATGAGAACGTaGAGCCCAGAGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHREMRT*SPEASW
Trigger: CCAGGATGCCTCTGGGCTTCACGTTCTCATTTCCCT...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CACTGCCGTGCACGATGTTCTCTGGGGTGTCATAAACCTCGGACTCCATGTGAACTGCTGGCAGGGAAATaGGAACGTGAAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HCRARCSLGCHKPRTPCELLAGK*EREAQR
Trigger: CCTCTGGGCTTCACGTTCTCATTTCCCTGCCAGCAG...TTCACATGGAGTCCGAGGTTTATGACACCCCAGAGAACATCGTGCACGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCTGCCGGTCCCAACAATaGGTCCAACCTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGCRSQQ*VQPHRW
Trigger: CCACCTGTGAGGTTGGACTCATTGTTGGGACCGGCA...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCACGGTCACTCTCGATCTaGGAGAGAAACTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPRSLSI*ERNLVS
Trigger: TGAGACCAAGTTTCTCTCTCAGATCGAGAGTGACCG...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCCCCCGCACACTGTCTTaGCGAGGATACTGTCATCGC +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGPRTLS*RGYCHR
Trigger: GCGATGACAGTATCCTCGTCAAGACAGTGTGCGGGG...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACCAGTTTGACCACATCTaGTCCTTCCACTCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHQFDHI*SFHSAR
Trigger: GCGAGCGGAGTGGAAGGAGCAGATGTGGTCAAACTG...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGTCTTCCCCAGTGCCCTaGATGATTTCAATAGGAATG +
Preference number: 4 (lower is better)
Translates to: EEAANAMPTLAFRQCPRESSPVP*MISIGM
Trigger: CATTCCTATTGAAATCATGCAGGGCACTGGGGAAGA...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGAGCGTCTCAGAGATCTaGCCTCGGAAGAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALSVSEI*PRKRNP
Trigger: GGGATTCCTCTTCCGAGGGCAGATCTCTGAGACGCT...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACTGCGCCACACAGCTGTaGGGCCCTCCTGGACACCAC +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYCATQL*GPPGHH
Trigger: GTGGTGTCCAGGAGGGCCGCACAGCTGTGTGGCGCA...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAACCGCAGCCATGCCTaGGCCACACAGCTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYNRSHA*ATQLCG
Trigger: GCCGCACAGCTGTGTGGCGCAGGCATGGCTGCGGTT...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTCCACAACCGCAGCCATaGCTGCGCCACACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TTRLTKRWEIPVMALFVGPQPQP*LRHTAV
Trigger: CACAGCTGTGTGGCGCAGGCATGGCTGCGGTTGTGG...ACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAAGCTGCTTGCCTCTGTaGGTAACCGCACGCCCACGG +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVASCLPL*VTARPR
Trigger: CCGTGGGCGTGCGGTTACGCACAGAGGCAAGCAGCT...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGAGCTGCTTGCCTCTGTaGGTAACCGCACGCCCACGG +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLSCLPL*VTARPR
Trigger: CCGTGGGCGTGCGGTTACGCACAGAGGCAAGCAGCT...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCACACCACGATGCGATaGCAGGCCACAGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRHTTMR*QATVGA
Trigger: GGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTG...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTCACACCACGATGCGATaGCAGGCCACAGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPHTTMR*QATVGA
Trigger: GGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTG...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGATTGACACACCACGATaGGATGCCAGGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALIDTPR*DARPQW
Trigger: CCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAAT...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCGAGGCGGCGAGCGGATaGCGGAACGCAAGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVEAASG*RNARLR
Trigger: CCGCAGCCTTGCGTTCCGGCATCCGCTCGCCGCCTC...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGTGCACGATGTTCTCTaGGGTGTCATAAACCTCGGA +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPVHDVL*GVINLG
Trigger: TCCGAGGTTTATGACACCCCAGAGAACATCGTGCAC...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AAGAGATCCGTCGACACCAACCGTGGTCCGCAGCCTGGGTGTGCCCTTGTTATCGTGCACGATGTTCTCTaGGGTGTCATAAACCTCGGA +
Preference number: 4 (lower is better)
Translates to: KRSVDTNRGPQPGCALVIVHDVL*GVINLG
Trigger: TCCGAGGTTTATGACACCCCAGAGAACATCGTGCAC...GATAACAAGGGCACACCCAGGCTGCGGACCACGGTTGGTGTCGACGGATCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCACCGCCGTCACCATaGCAGCCCCCTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKPPPSP*QPPCRC
Trigger: GCAGCGGCAAGGGGGCTGCCATGGTGACGGCGGTGG...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGAAGGTGACTACATCGTaGCCCACGCAGTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALKVTTS*PTQSVA
Trigger: GGCAACAGACTGCGTGGGCCACGATGTAGTCACCTT...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACAGGATAGCCCGGACCTaGAGCAGTGCTAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHRIART*SSANRS
Trigger: TGACCGATTAGCACTGCTCCAGGTCCGGGCTATCCT...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGGATTCTGGAGAAGTGTaGATGAAGCTTGTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQDSGEV*MKLVEC
Trigger: ACACTCTACAAGCTTCATCCACACTTCTCCAGAATC...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTGATTCTGGAGAAGTGTaGATGAAGCTTGTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRDSGEV*MKLVEC
Trigger: ACACTCTACAAGCTTCATCCACACTTCTCCAGAATC...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGGATTCTGGAGAAGTGTaGATGAAGCTTGTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGDSGEV*MKLVEC
Trigger: ACACTCTACAAGCTTCATCCACACTTCTCCAGAATC...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCGGAGAGGCAGTAGGCTaGGGATCCCGGACTCTTAGC +
Preference number: 4 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGGEAVG*GSRTLS
Trigger: GCTAAGAGTCCGGGATCCCCAGCCTACTGCCTCTCC...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGGGAGAGGCAGTAGGCTaGGGATCCCGGACTCTTAGC +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWGEAVG*GSRTLS
Trigger: GCTAAGAGTCCGGGATCCCCAGCCTACTGCCTCTCC...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
3UTR CAA 72 bp TCCGGGGTGATCCGCCCTTCAAATAAGAGGCCCTCCTaGGCCATCTTGACTAGGATCAGTCGAACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SGVIRPSNKRPS*AILTRISRTSS
Trigger: AGAGCTGGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGGGCCTCTTATTTGAAGGGCGGATCACCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAAGGCACTCAGCAACATaGTCAAAAAGCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPRHSAT*SKSWLP
Trigger: TGGAAGCCAGCTTTTTGATCATGTTGCTGAGTGCCT...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGAAGGAAAAGAAAACGTaGATCCCACAGGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQKEKKT*IPQVTS
Trigger: AGAAGTTACCTGTGGGATTCACGTTTTCTTTTCCTT...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGTGGTGCCAGTGCCGATaGTCAGGCCGACTTCACAGT +
Preference number: 4 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGWCQCR*SGRLHS
Trigger: ACTGTGAAGTCGGCCTGATCATCGGCACTGGCACCA...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAAACCCTTTGTCCACGTaGTCAAGATTCCCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVANPLST*SRFPRP
Trigger: TGGACGCGGGAATCTTGATCACGTGGACAAAGGGTT...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCTGCCGGTCCCAACAATaGGTCCAACCTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGCRSQQ*VQPHRW
Trigger: CCACCTGTGAGGTTGGACTCATTGTTGGGACCGGCA...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCACAGGTGGGCCATCTTaGCCAGTGTCAGGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGTGGPS*PVSGCG
Trigger: ACCACAACCTGACACTGGGCAAGATGGCCCACCTGT...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS-3UTR GCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGAGGGTCTCCTCTATCTaGCGGTGCTGCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRRVSSI*RCCSAK
Trigger: CTTGGCCGAGCAGCACCGGCAGATAGAGGAGACCCT...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGACCACGGCATTGTTGTaGGTCTGCTTCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWTTALL*VCFLSP
Trigger: GGGGCTGAGGAAGCAGACGCACAACAATGCCGTGGT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCAGTAGGCTGGGGATCCCGGACTCTTAGCTGCTTGCCTCTGTGCGTAACCGCAAGTCGATTAAGATGTTaGGGACGATTTCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: AVGWGSRTLSCLPLCVTASRLRC*GRFHPG
Trigger: ACCTGGGTGAAATCGTCCGCAACATCTTAATCGACT...TGCGGTTACGCACAGAGGCAAGCAGCTAAGAGTCCGGGATCCCCAGCCTACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR GCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAAGCGTCTCAGAGATCTaGCCTCGGAAGAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPSVSEI*PRKRNP
Trigger: GGGATTCCTCTTCCGAGGGCAGATCTCTGAGACGCT...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCCTATTCAGACCTAGCTaGTGGAGGATAGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGLFRPS*WRIART
Trigger: GGTCCGGGCTATCCTCCAGCAGCTAGGTCTGAATAG...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATGCGCCACACAGCTGTaGGGCCCTCCTGGACACCAC +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKCATQL*GPPGHH
Trigger: GTGGTGTCCAGGAGGGCCGCACAGCTGTGTGGCGCA...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGCCACAACCGCAGCCATaGCTGCGCCACACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVPQPQP*LRHTAV
Trigger: CACAGCTGTGTGGCGCAGGCATGGCTGCGGTTGTGG...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCTCCCGGACTCTTAGCTaGTTGCCTCTGTGCGTAACC +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGSRTLS*LPLCVT
Trigger: GGTTACGCACAGAGGCAAGCAGCTAAGAGTCCGGGA...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGCACACCACGATGCGATaGCAGGCCACAGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVHTTMR*QATVGA
Trigger: GGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTG...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTAACATACACTGTCCTTaGAATCCAACTGTGGATTCT +
Preference number: 4 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRNIHCP*NPTVDS
Trigger: AGAATCCACAGTTGGATTGCAAGGACAGTGTATGTT...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR CCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACCCACAGCTACGATGTTaGCATCATAGTCCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHPQLRC*HHSPLA
Trigger: AGCGAGGGGACTATGATGCCAACATCGTAGCTGTGG...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAAGCGAAATGAGACAATaGTGCAAACGTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPSEMRQ*CKRAGL
Trigger: CAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCT...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAAGATGGCGCCCAGTGTaGCAGCCACCAAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVARWRPV*QPPSWL
Trigger: CAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCT...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGAGATGGCGCCCAGTGTaGCAGCCACCAAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQRWRPV*QPPSWL
Trigger: CAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCT...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGGCAGGCGGTTCAAGATaGCGCCCAGTGTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LYPTIYTISWILLSSPRRAGGSR*RPVWQP
Trigger: TGGCTGCCACACTGGGCGCCATCTTGAACCGCCTGC...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGCCGTGGTCCGCAGCCTaGGTGTGCCCTTGTTATCAC +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLPWSAA*VCPCYH
Trigger: GTGATAACAAGGGCACACCCAGGCTGCGGACCACGG...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAACGTCGACACCAACCGTaGTCCGCAGCCTGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKRRHQP*SAAWVC
Trigger: GCACACCCAGGCTGCGGACCACGGTTGGTGTCGACG...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAAGGATAGCCCGGACCTaGAGCAGTGCTAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPRIART*SSANRS
Trigger: TGACCGATTAGCACTGCTCCAGGTCCGGGCTATCCT...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAAGAAGGCCTGTCAGGTaGTGTGATTTTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPRRPVR*CDFPSP
Trigger: TGGAGATGGAAAATCACACCACCTGACAGGCCTTCT...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACCGGCTCACAAAGCGGTaGGAAATTCCAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHRLTKR*EIPVMA
Trigger: TGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCG...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCGTAGCCGATTCTCGCTaGCAGATCTGCCCCATTGTG +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGVADSR*QICPIV
Trigger: CACAATGGGGCAGATCTGCCAGCGAGAATCGGCTAC...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAGTAGCCGATTCTCGCTaGCAGATCTGCCCCATTGTG +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPVADSR*QICPIV
Trigger: CACAATGGGGCAGATCTGCCAGCGAGAATCGGCTAC...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
3UTR CAA 72 bp TCGGACGGCTCCACTCCCAGGCGGGTCAGGATTTCTTaGGCATTGTGGAGGCCTTCCTTATTCTTTTCGATG +
Preference number: 4 (lower is better)
Translates to: SDGSTPRRVRIS*ALWRPSLFFSM
Trigger: CATCGAAAAGAATAAGGAAGGCCTCCACAATGCCAAAGAAATCCTGACCCGCCTGGGAGTGGAGCCGTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAACCTCGGACTCCATGTaGACATTCTGGTTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPTSDSM*TFWFFS
Trigger: TGAGAAAAACCAGAATGTTCACATGGAGTCCGAGGT...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACATCGCTTTGTCCAGGTaGTCAGGATGGCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHIALSR*SGWPHL
Trigger: TAGATGAGGCCATCCTGATCACCTGGACAAAGCGAT...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAGCAAACGTGCTGGACTaGGACACAGTCATCATCGGA +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPANVLD*DTVIIG
Trigger: TCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGC...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CACTGCCGTGCACGATGTTCTCTGGGGTGTCATAAACCTCGGACTCCATGTGAAGCAAACGTGCTGGACTaGGACACAGTCATCATCGGA +
Preference number: 4 (lower is better)
Translates to: HCRARCSLGCHKPRTPCEANVLD*DTVIIG
Trigger: TCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGC...TTCACATGGAGTCCGAGGTTTATGACACCCCAGAGAACATCGTGCACGGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGCAGCATGTCCTTGGTaGGGTGGAAATGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVAAACPW*GGNEPG
Trigger: CCCTGGCTCATTTCCACCTCACCAAGGACATGCTGC...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGCTGCTGGCAGGGAAATaGGAACGTGAAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQLLAGK*EREAQR
Trigger: CCTCTGGGCTTCACGTTCTCATTTCCCTGCCAGCAG...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGTGCCGGTCCCAACAATaGGTCCAACCTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLCRSQQ*VQPHRW
Trigger: CCACCTGTGAGGTTGGACTCATTGTTGGGACCGGCA...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGCCGGTCCCAACAATaGGTCCAACCTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: TTRLTKRWEIPVMALFVGCRSQQ*VQPHRW
Trigger: CCACCTGTGAGGTTGGACTCATTGTTGGGACCGGCA...ACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGTGCCGGTCCCAACAATaGGTCCAACCTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRCRSQQ*VQPHRW
Trigger: CCACCTGTGAGGTTGGACTCATTGTTGGGACCGGCA...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCCGCACACTGTCTTaGCGAGGATACTGTCATCGC +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRPRTLS*RGYCHR
Trigger: GCGATGACAGTATCCTCGTCAAGACAGTGTGCGGGG...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTTGCCTATTAAACTTTaGGAAGTTAACCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: TISWILLSSPRRQALAPALPIKL*EVNPPL
Trigger: CAATGGAGGGTTAACTTCTCAAAGTTTAATAGGCAA...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR GCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCATGGCTTCCACTGCCGTaGACGATGTTCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVAWLPLP*TMFSGV
Trigger: CACCCCAGAGAACATCGTGCACGGCAGTGGAAGCCA...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAATCCGCAGCCTGGGTGTaGCCTTGTTATCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKSAAWV*PCYHAG
Trigger: GCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGA...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAGGGTCTCCTCTATCTaGCGGTGCTGCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYRVSSI*RCCSAK
Trigger: CTTGGCCGAGCAGCACCGGCAGATAGAGGAGACCCT...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGACCACGGCATTGTTGTaGGTCTGCTTCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLTTALL*VCFLSP
Trigger: GGGGCTGAGGAAGCAGACGCACAACAATGCCGTGGT...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGCCCACGCAGTCTGTTaGCTTAAAACCCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHAHAVC*LKTLCP
Trigger: TGGACAAAGGGTTTTAAGGCAACAGACTGCGTGGGC...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAGCCCACGCAGTCTGTTaGCTTAAAACCCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAAHAVC*LKTLCP
Trigger: TGGACAAAGGGTTTTAAGGCAACAGACTGCGTGGGC...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCTATTCAGACCTAGCTaGTGGAGGATAGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGLFRPS*WRIART
Trigger: GGTCCGGGCTATCCTCCAGCAGCTAGGTCTGAATAG...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAATGCGCCACACAGCTGTaGGGCCCTCCTGGACACCAC +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKCATQL*GPPGHH
Trigger: GTGGTGTCCAGGAGGGCCGCACAGCTGTGTGGCGCA...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGTCCCGGACTCTTAGCTaGTTGCCTCTGTGCGTAACC +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWSRTLS*LPLCVT
Trigger: GGTTACGCACAGAGGCAAGCAGCTAAGAGTCCGGGA...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATCCATTAGTTGGATTTTaGTTTCCTCCCCGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYPLVGF*FPPRAG
Trigger: GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCCATTAGTTGGATTTTaGTTTCCTCCCCGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWPLVGF*FPPRAG
Trigger: GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGATTGACACACCACGATaGGATGCCAGGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWIDTPR*DARPQW
Trigger: CCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAAT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGTCTCGCTGGCAGATCTaGCCCATTGTGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVSRWQI*PIVGRA
Trigger: TGCCCTCCCCACAATGGGGCAGATCTGCCAGCGAGA...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCATTTTGGTTTTTCAGCTaGTGTAGCCGATTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPFWFFS*CSRFSL
Trigger: CAGCGAGAATCGGCTACAGCAGCTGAAAAACCAAAA...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCACATCGGAGAGCCGCATaGCATAGAGATACTTGTCAA +
Preference number: 4 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPHRRAA*HRDTCQ
Trigger: TTGACAAGTATCTCTATGCCATGCGGCTCTCCGATG...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGACCTTACGAATGTTaGCAACATCTTGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPGPYEC*QHLDCG
Trigger: GCCACAGTCAAGATGTTGCCAACATTCGTAAGGTCC...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCCCACAGCTACGATGTTaGCATCATAGTCCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGPQLRC*HHSPLA
Trigger: AGCGAGGGGACTATGATGCCAACATCGTAGCTGTGG...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAACCGTGGTCCGCAGCCTaGGTGTGCCCTTGTTATCAC +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKPWSAA*VCPCYH
Trigger: GTGATAACAAGGGCACACCCAGGCTGCGGACCACGG...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACACGCCGGGAATACTGTaGGTGCGTCTTGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHTPGIL*VRLVKR
Trigger: TCTCTTTACAAGACGCACCCACAGTATTCCCGGCGT...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGCGCCTTAGAGTCTTGTaGAAACGCCGGGAATACTGT +
Preference number: 4 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALRLRVL*KRREYC
Trigger: ACAGTATTCCCGGCGTTTCCACAAGACTCTAAGGCG...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGGTCCAACCTCACAGGTaGGCTCCTCATAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWVQPHR*APHKHR
Trigger: CCTGTGCTTATGAGGAGCCCACCTGTGAGGTTGGAC...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCGTCCAACCTCACAGGTaGGCTCCTCATAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: LQYIPLVGFCFPPRAGRPVQPHR*APHKHR
Trigger: CCTGTGCTTATGAGGAGCCCACCTGTGAGGTTGGAC...GGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGAGGATAGCCCGGACCTaGAGCAGTGCTAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGRIART*SSANRS
Trigger: TGACCGATTAGCACTGCTCCAGGTCCGGGCTATCCT...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCAGGATAGCCCGGACCTaGAGCAGTGCTAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: LQYIPLVGFCFPPRAGRPRIART*SSANRS
Trigger: TGACCGATTAGCACTGCTCCAGGTCCGGGCTATCCT...GGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGATATATACCATTAGTTaGATTTTGCTTTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LAGRVGGRRLKREVLERQIYTIS*ILLSSP
Trigger: CGGGGAGGAAAGCAAAATCCAACTAATGGTATATAT...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGGCACAAAGCAGGTGTaGGTAGGTGTTTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHGTKQV*VGVWTL
Trigger: AAGAGTCCAAACACCTACCCACACCTGCTTTGTGCC...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAGGCACAAAGCAGGTGTaGGTAGGTGTTTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAGTKQV*VGVWTL
Trigger: AAGAGTCCAAACACCTACCCACACCTGCTTTGTGCC...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
3UTR CAA 72 bp ATTCTGTACCCTACAATATATACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCA +
Preference number: 4 (lower is better)
Translates to: ILYPTIYTISWI*LSSPRRQALAP
Trigger: TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGAGGCACTCAGCAACATaGTCAAAAAGCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALRHSAT*SKSWLP
Trigger: TGGAAGCCAGCTTTTTGATCATGTTGCTGAGTGCCT...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCATCGCTTTGTCCAGGTaGTCAGGATGGCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGIALSR*SGWPHL
Trigger: TAGATGAGGCCATCCTGATCACCTGGACAAAGCGAT...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCTGGTGCCAGTGCCGATaGTCAGGCCGACTTCACAGT +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGWCQCR*SGRLHS
Trigger: ACTGTGAAGTCGGCCTGATCATCGGCACTGGCACCA...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACTGGTGCCAGTGCCGATaGTCAGGCCGACTTCACAGT +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYWCQCR*SGRLHS
Trigger: ACTGTGAAGTCGGCCTGATCATCGGCACTGGCACCA...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCGCAAACGTGCTGGACTaGGACACAGTCATCATCGGA +
Preference number: 4 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGANVLD*DTVIIG
Trigger: TCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGC...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTTGGTGAGGTGGAAATaGGCCAGGGTCTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYLVRWK*ARVSSI
Trigger: GATAGAGGAGACCCTGGCTCATTTCCACCTCACCAA...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAGCAGCATGTCCTTGGTaGGGTGGAAATGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKAACPW*GGNEPG
Trigger: CCCTGGCTCATTTCCACCTCACCAAGGACATGCTGC...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTGCATCCTGGGGCCTTTaGTCCCCATGTAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPASWGL*SPCSPR
Trigger: TCTTGGACTACATGGGGATCAAAGGCCCCAGGATGC...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGGCATCCTGGGGCCTTTaGTCCCCATGTAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLASWGL*SPCSPR
Trigger: TCTTGGACTACATGGGGATCAAAGGCCCCAGGATGC...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGCATCCTGGGGCCTTTaGTCCCCATGTAGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQASWGL*SPCSPR
Trigger: TCTTGGACTACATGGGGATCAAAGGCCCCAGGATGC...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGAGGGAAATGAGAACGTaGAGCCCAGAGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQREMRT*SPEASW
Trigger: CCAGGATGCCTCTGGGCTTCACGTTCTCATTTCCCT...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACCTGCTGGCAGGGAAATaGGAACGTGAAGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYLLAGK*EREAQR
Trigger: CCTCTGGGCTTCACGTTCTCATTTCCCTGCCAGCAG...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCACATCCCTTAGTAAGGTaGCTACATCGTGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVAHPLVR*LHRGPR
Trigger: GCGTGGGCCACGATGTAGTCACCTTACTAAGGGATG...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGTGCCGGTCCCAACAATaGGTCCAACCTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LYPTIYTISWILLSSPRRCRSQQ*VQPHRW
Trigger: CCACCTGTGAGGTTGGACTCATTGTTGGGACCGGCA...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CACTGCCGTGCACGATGTTCTCTGGGGTGTCATAAACCTCGGACTCCATGTGAAGAGGAGGGATCCGGGTaGGAGATATTATCAACAGCA +
Preference number: 4 (lower is better)
Translates to: HCRARCSLGCHKPRTPCEEEGSG*EILSTA
Trigger: TGCTGTTGATAATATCTCTCACCCGGATCCCTCCTC...TTCACATGGAGTCCGAGGTTTATGACACCCCAGAGAACATCGTGCACGGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR GCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGAAAGCTGGCTTCCACTaGCGTGCACGATGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWKAGFH*RARCSL
Trigger: CAGAGAACATCGTGCACGGCAGTGGAAGCCAGCTTT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTCAGTTTGACCACATCTaGTCCTTCCACTCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPQFDHI*SFHSAR
Trigger: GCGAGCGGAGTGGAAGGAGCAGATGTGGTCAAACTG...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAACAATGGTGCAAACGTaGTGGACTGAGACACAGTCA +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVATMVQT*WTETQS
Trigger: TGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGT...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCCGCAGCCTGGGTGTaGCCTTGTTATCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKSAAWV*PCYHAG
Trigger: GCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGA...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CGATGTTCTCTGGGGTGTCATAAACCTCGGACTCCATGTGAACATTCTGGTTTTTCCGCAGCCTGGGTGTaGCCTTGTTATCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: RCSLGCHKPRTPCEHSGFSAAWV*PCYHAG
Trigger: GCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGA...AAAACCAGAATGTTCACATGGAGTCCGAGGTTTATGACACCCCAGAGAACATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR GCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGACCACGGCATTGTTGTaGGTCTGCTTCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVTTALL*VCFLSP
Trigger: GGGGCTGAGGAAGCAGACGCACAACAATGCCGTGGT...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCATCTTCCCCAGTGCCCTaGATGATTTCAATAGGAATG +
Preference number: 4 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPSSPVP*MISIGM
Trigger: CATTCCTATTGAAATCATGCAGGGCACTGGGGAAGA...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAGCCCACGCAGTCTGTTaGCTTAAAACCCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPAHAVC*LKTLCP
Trigger: TGGACAAAGGGTTTTAAGGCAACAGACTGCGTGGGC...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTAGCGTCTCAGAGATCTaGCCTCGGAAGAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: TTRLTKRWEIPVMALFVGSVSEI*PRKRNP
Trigger: GGGATTCCTCTTCCGAGGGCAGATCTCTGAGACGCT...ACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCTATTCAGACCTAGCTaGTGGAGGATAGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRLFRPS*WRIART
Trigger: GGTCCGGGCTATCCTCCAGCAGCTAGGTCTGAATAG...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTCTATTCAGACCTAGCTaGTGGAGGATAGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: TTRLTKRWEIPVMALFVGLFRPS*WRIART
Trigger: GGTCCGGGCTATCCTCCAGCAGCTAGGTCTGAATAG...ACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCACTATTCAGACCTAGCTaGTGGAGGATAGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVALFRPS*WRIART
Trigger: GGTCCGGGCTATCCTCCAGCAGCTAGGTCTGAATAG...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGTCCTTCACCGTCTGGTaGATGATTCTGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALSFTVW*MILEKC
Trigger: ACACTTCTCCAGAATCATGCACCAGACGGTGAAGGA...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAAGCTGCTTGCCTCTGTaGGTAACCGCACGCCCACGG +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKSCLPL*VTARPR
Trigger: CCGTGGGCGTGCGGTTACGCACAGAGGCAAGCAGCT...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGTCCCGGACTCTTAGCTaGTTGCCTCTGTGCGTAACC +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRSRTLS*LPLCVT
Trigger: GGTTACGCACAGAGGCAAGCAGCTAAGAGTCCGGGA...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCACCATTAGTTGGATTTTaGTTTCCTCCCCGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVAPLVGF*FPPRAG
Trigger: GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTCTCGCCTTCAGGCAGTaGCCCCGGGAGGGAGGCCCG +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLLAFRQ*PREGGP
Trigger: CGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAG...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGAAGCAGCTAATGCTATaGCCACACTCGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWKQLML*PHSPSG
Trigger: GCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTATTGACACACCACGATaGGATGCCAGGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPIDTPR*DARPQW
Trigger: CCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAAT...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAAAGTTAACCCTCCATTaGCCAAGATGTTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAKLTLH*PRCFRG
Trigger: GCCCCTGAAACATCTTGGGCAATGGAGGGTTAACTT...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCACAGAGCCATCAGGAATaGACCTTACGAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAQSHQE*TLRMLA
Trigger: TGCCAACATTCGTAAGGTCCATTCCTGATGGCTCTG...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAGTGCACGATGTTCTCTaGGGTGTCATAAACCTCGGA +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPVHDVL*GVINLG
Trigger: TCCGAGGTTTATGACACCCCAGAGAACATCGTGCAC...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGATTTCTTTGGCATTGTaGAGGCCTTCCTTATTCTTT +
Preference number: 4 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREISLAL*RPSLFF
Trigger: AAAGAATAAGGAAGGCCTCCACAATGCCAAAGAAAT...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGGTCAGGATTTCTTTaGCATTGTGGAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPGSGFL*HCGGLP
Trigger: AGGAAGGCCTCCACAATGCCAAAGAAATCCTGACCC...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAATGGTGCAAACGTGCTaGACTGAGACACAGTCATCA +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAMVQTC*TETQSS
Trigger: TGATGACTGTGTCTCAGTCCAGCACGTTTGCACCAT...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGAGCGAAATGAGACAATaGTGCAAACGTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALSEMRQ*CKRAGL
Trigger: CAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCT...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCATGGCAGCCACCAAGTTaGCTGAGCGAAATGAGACAA +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPWQPPS*LSEMRQ
Trigger: TTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCA...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGAAGGTGACTACATCGTaGCCCACGCAGTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRKVTTS*PTQSVA
Trigger: GGCAACAGACTGCGTGGGCCACGATGTAGTCACCTT...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTAGGATAGCCCGGACCTaGAGCAGTGCTAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPRIART*SSANRS
Trigger: TGACCGATTAGCACTGCTCCAGGTCCGGGCTATCCT...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAGGAGAGGCAGTAGGCTaGGGATCCCGGACTCTTAGC +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKGEAVG*GSRTLS
Trigger: GCTAAGAGTCCGGGATCCCCAGCCTACTGCCTCTCC...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTGGTCCTCCGCAGCCCTaGCGAGCCGTGGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLGPPQP*RAVVLR
Trigger: CCGGAGGACCACGGCTCGCCAGGGCTGCGGAGGACC...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359426.7
ENST00000493591.6
CDS-3UTR CCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGTGTGGGTAGGTGTTTaGACTCTTTTCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHVWVGV*TLFLLR
Trigger: CCTGAGAAGGAAAAGAGTCCAAACACCTACCCACAC...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCAGGCACTCAGCAACATaGTCAAAAAGCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGRHSAT*SKSWLP
Trigger: TGGAAGCCAGCTTTTTGATCATGTTGCTGAGTGCCT...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGATCGCTTTGTCCAGGTaGTCAGGATGGCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGIALSR*SGWPHL
Trigger: TAGATGAGGCCATCCTGATCACCTGGACAAAGCGAT...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATGGTGCCAGTGCCGATaGTCAGGCCGACTTCACAGT +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKWCQCR*SGRLHS
Trigger: ACTGTGAAGTCGGCCTGATCATCGGCACTGGCACCA...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGCAAACGTGCTGGACTaGGACACAGTCATCATCGGA +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQANVLD*DTVIIG
Trigger: TCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGC...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGGCAAACGTGCTGGACTaGGACACAGTCATCATCGGA +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLANVLD*DTVIIG
Trigger: TCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGC...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGTTGGTGAGGTGGAAATaGGCCAGGGTCTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQLVRWK*ARVSSI
Trigger: GATAGAGGAGACCCTGGCTCATTTCCACCTCACCAA...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGAGGGAAATGAGAACGTaGAGCCCAGAGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVREMRT*SPEASW
Trigger: CCAGGATGCCTCTGGGCTTCACGTTCTCATTTCCCT...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTAACCCTTTGTCCACGTaGTCAAGATTCCCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPNPLST*SRFPRP
Trigger: TGGACGCGGGAATCTTGATCACGTGGACAAAGGGTT...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAAACCCTTTGTCCACGTaGTCAAGATTCCCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVANPLST*SRFPRP
Trigger: TGGACGCGGGAATCTTGATCACGTGGACAAAGGGTT...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAACATCCCTTAGTAAGGTaGCTACATCGTGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKHPLVR*LHRGPR
Trigger: GCGTGGGCCACGATGTAGTCACCTTACTAAGGGATG...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTGTCGTAGTGTGTCCTaGTATCATCCAGACACCCGT +
Preference number: 4 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYCRSVS*YHPDTR
Trigger: ACGGGTGTCTGGATGATATCAGGACACACTACGACA...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAGGAATCCCTTCTTGGTaGAGTCGATTAAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAGIPSW*SRLRCC
Trigger: GCAACATCTTAATCGACTTCACCAAGAAGGGATTCC...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCCGGTCACTCTCGATCTaGGAGAGAAACTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LQYIPLVGFCFPPRAGRPRSLSI*ERNLVS
Trigger: TGAGACCAAGTTTCTCTCTCAGATCGAGAGTGACCG...GGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATGAGGAGGGATCCGGGTaGGAGATATTATCAACAGCA +
Preference number: 4 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYEEGSG*EILSTA
Trigger: TGCTGTTGATAATATCTCTCACCCGGATCCCTCCTC...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGCATCCTTCAGCTCCGTaGAGTAATAGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLHPSAP*SNRPGA
Trigger: AGCTCCTGGCCTATTACTTCACGGAGCTGAAGGATG...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359426.7
ENST00000493591.6
CDS-3UTR TCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGACGATTTTGTGGCATTaGCACACCACGATGCGATGC +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWTILWH*HTTMRC
Trigger: GCATCGCATCGTGGTGTGTCAATGCCACAAAATCGT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATGGCTTCCACTGCCGTaGACGATGTTCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKWLPLP*TMFSGV
Trigger: CACCCCAGAGAACATCGTGCACGGCAGTGGAAGCCA...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCCAGTTTGACCACATCTaGTCCTTCCACTCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGQFDHI*SFHSAR
Trigger: GCGAGCGGAGTGGAAGGAGCAGATGTGGTCAAACTG...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCACAATGGTGCAAACGTaGTGGACTGAGACACAGTCA +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGTMVQT*WTETQS
Trigger: TGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGT...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGTCTTCCCCAGTGCCCTaGATGATTTCAATAGGAATG +
Preference number: 4 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALSSPVP*MISIGM
Trigger: CATTCCTATTGAAATCATGCAGGGCACTGGGGAAGA...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGGCCCACGCAGTCTGTTaGCTTAAAACCCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWAHAVC*LKTLCP
Trigger: TGGACAAAGGGTTTTAAGGCAACAGACTGCGTGGGC...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGAGCGTCTCAGAGATCTaGCCTCGGAAGAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: LYPTIYTISWILLSSPRRSVSEI*PRKRNP
Trigger: GGGATTCCTCTTCCGAGGGCAGATCTCTGAGACGCT...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGACTTGGTCTCAAAGATaGCCCGGGTCTTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRTWSQR*PGSSAS
Trigger: AGACGCTGAAGACCCGGGGCATCTTTGAGACCAAGT...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGACTTGGTCTCAAAGATaGCCCGGGTCTTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQTWSQR*PGSSAS
Trigger: AGACGCTGAAGACCCGGGGCATCTTTGAGACCAAGT...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAAATGAGACAATGGTGCAAACGTGCTGGACTGAGACACAGTCATCATCGGACGACTTGGTCTCAAAGATaGCCCGGGTCTTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: EMRQWCKRAGLRHSHHRTTWSQR*PGSSAS
Trigger: AGACGCTGAAGACCCGGGGCATCTTTGAGACCAAGT...CGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR GCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCTACTGTCATCGCAGGTaGTATTCAGACCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGYCHRR*YSDLAA
Trigger: AGCAGCTAGGTCTGAATAGCACCTGCGATGACAGTA...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAATCCCGGACTCTTAGCTaGTTGCCTCTGTGCGTAACC +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKSRTLS*LPLCVT
Trigger: GGTTACGCACAGAGGCAAGCAGCTAAGAGTCCGGGA...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGTCCCGGACTCTTAGCTaGTTGCCTCTGTGCGTAACC +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVSRTLS*LPLCVT
Trigger: GGTTACGCACAGAGGCAAGCAGCTAAGAGTCCGGGA...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACCCATTAGTTGGATTTTaGTTTCCTCCCCGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYPLVGF*FPPRAG
Trigger: GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCCCATTAGTTGGATTTTaGTTTCCTCCCCGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGPLVGF*FPPRAG
Trigger: GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCATACATTAGAAATGGATaGCACTACACTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPYIRNG*HYTSHV
Trigger: CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTA...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCATTGACACACCACGATaGGATGCCAGGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGIDTPR*DARPQW
Trigger: CCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAAT...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATTGACACACCACGATaGGATGCCAGGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKIDTPR*DARPQW
Trigger: CCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAAT...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTTTGGTTTTTCAGCTaGTGTAGCCGATTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAFWFFS*CSRFSL
Trigger: CAGCGAGAATCGGCTACAGCAGCTGAAAAACCAAAA...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCGGACCTTACGAATGTTaGCAACATCTTGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGGPYEC*QHLDCG
Trigger: GCCACAGTCAAGATGTTGCCAACATTCGTAAGGTCC...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATGGGTCAGGATTTCTTTaGCATTGTGGAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYGSGFL*HCGGLP
Trigger: AGGAAGGCCTCCACAATGCCAAAGAAATCCTGACCC...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCAGCCACCAAGTTaGCTGAGCGAAATGAGACAA +
Preference number: 4 (lower is better)
Translates to: LQYIPLVGFCFPPRAGRPWQPPS*LSEMRQ
Trigger: TTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCA...GGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCGCCTTAGAGTCTTGTaGAAACGCCGGGAATACTGT +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWRLRVL*KRREYC
Trigger: ACAGTATTCCCGGCGTTTCCACAAGACTCTAAGGCG...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGAAGGTGACTACATCGTaGCCCACGCAGTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LYPTIYTISWILLSSPRRKVTTS*PTQSVA
Trigger: GGCAACAGACTGCGTGGGCCACGATGTAGTCACCTT...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCGTCCAACCTCACAGGTaGGCTCCTCATAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGVQPHR*APHKHR
Trigger: CCTGTGCTTATGAGGAGCCCACCTGTGAGGTTGGAC...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACGTCCAACCTCACAGGTaGGCTCCTCATAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYVQPHR*APHKHR
Trigger: CCTGTGCTTATGAGGAGCCCACCTGTGAGGTTGGAC...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGAGGATAGCCCGGACCTaGAGCAGTGCTAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: LYPTIYTISWILLSSPRRRIART*SSANRS
Trigger: TGACCGATTAGCACTGCTCCAGGTCCGGGCTATCCT...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAACTACACTTCACACGTaGGGGACCAGGTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPTTLHT*GTRSKS
Trigger: TGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTCGGCTCACAAAGCGGTaGGAAATTCCAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPRLTKR*EIPVMA
Trigger: TGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCG...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCGTGTGGGTAGGTGTTTaGACTCTTTTCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGVWVGV*TLFLLR
Trigger: CCTGAGAAGGAAAAGAGTCCAAACACCTACCCACAC...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAACCTCGGACTCCATGTaGACATTCTGGTTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPTSDSM*TFWFFS
Trigger: TGAGAAAAACCAGAATGTTCACATGGAGTCCGAGGT...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAAAGGAAAAGAAAACGTaGATCCCACAGGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPKEKKT*IPQVTS
Trigger: AGAAGTTACCTGTGGGATTCACGTTTTCTTTTCCTT...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGCTCCCCATTCTGTATTaGTACACATCCTCCCCTCGT +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQLPILY*YTSSPR
Trigger: ACGAGGGGAGGATGTGTATCAATACAGAATGGGGAG...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAACCCTTTGTCCACGTaGTCAAGATTCCCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKNPLST*SRFPRP
Trigger: TGGACGCGGGAATCTTGATCACGTGGACAAAGGGTT...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCATGTCGTAGTGTGTCCTaGTATCATCCAGACACCCGT +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVACRSVS*YHPDTR
Trigger: ACGGGTGTCTGGATGATATCAGGACACACTACGACA...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGTGTCGTAGTGTGTCCTaGTATCATCCAGACACCCGT +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLCRSVS*YHPDTR
Trigger: ACGGGTGTCTGGATGATATCAGGACACACTACGACA...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCCATCCTTCAGCTCCGTaGAGTAATAGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGHPSAP*SNRPGA
Trigger: AGCTCCTGGCCTATTACTTCACGGAGCTGAAGGATG...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359426.7
ENST00000493591.6
CDS-3UTR TCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACACTTGTCAATCTTTTTaGCCTGGTCATCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHTCQSF*PGHPSA
Trigger: AGCTGAAGGATGACCAGGTCAAAAAGATTGACAAGT...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359426.7
CDS-3UTR TCA 90 bp GAAATGAGACAATGGTGCAAACGTGCTGGACTGAGACACAGTCATCATCGGACGACGATTTTGTGGCATTaGCACACCACGATGCGATGC +
Preference number: 4 (lower is better)
Translates to: EMRQWCKRAGLRHSHHRTTILWH*HTTMRC
Trigger: GCATCGCATCGTGGTGTGTCAATGCCACAAAATCGT...CGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCGGTGGGAAATTCCAGTaGTGGCATTGTTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGGGKFQ*WHCLLV
Trigger: AACCAACAAACAATGCCATCACTGGAATTTCCCACC...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCACTTTCAGCAAGTAGATaGAGTTTTGGTTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPLSASR*SFGFSA
Trigger: AGCTGAAAAACCAAAACTTCATCTACTTGCTGAAAG...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGAAAGCTGGCTTCCACTaGCGTGCACGATGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LYPTIYTISWILLSSPRRKAGFH*RARCSL
Trigger: CAGAGAACATCGTGCACGGCAGTGGAAGCCAGCTTT...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAACAGTTTGACCACATCTaGTCCTTCCACTCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKQFDHI*SFHSAR
Trigger: GCGAGCGGAGTGGAAGGAGCAGATGTGGTCAAACTG...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCACAATGGTGCAAACGTaGTGGACTGAGACACAGTCA +
Preference number: 4 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGTMVQT*WTETQS
Trigger: TGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGT...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAGAAATGAGACAATGGTaGAAACGTGCTGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPEMRQW*KRAGLR
Trigger: TCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGAGGGTCTCCTCTATCTaGCGGTGCTGCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVRVSSI*RCCSAK
Trigger: CTTGGCCGAGCAGCACCGGCAGATAGAGGAGACCCT...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCACCACGGCATTGTTGTaGGTCTGCTTCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVTTALL*VCFLSP
Trigger: GGGGCTGAGGAAGCAGACGCACAACAATGCCGTGGT...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCACCAAGAAGTCAGAGATaGAGGAGACAATGTGATCAA +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAPRSQR*RRQCDQ
Trigger: TTGATCACATTGTCTCCTGCATCTCTGACTTCTTGG...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGCCAAGAAGTCAGAGATaGAGGAGACAATGTGATCAA +
Preference number: 4 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALPRSQR*RRQCDQ
Trigger: TTGATCACATTGTCTCCTGCATCTCTGACTTCTTGG...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAAGTCGATTAAGATGTTaGGGACGATTTCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPSRLRC*GRFHPG
Trigger: ACCTGGGTGAAATCGTCCGCAACATCTTAATCGACT...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GTTCTCCGGACGAAGGAGGGCAGCATCTTAACCACGGCATTGTTGTGCGTCTGCTACATTAGAAATGGATaGCACTACACTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: VLRTKEGSILTTALLCVCYIRNG*HYTSHV
Trigger: CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTA...GCAGACGCACAACAATGCCGTGGTTAAGATGCTGCCCTCCTTCGTCCGGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR GCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGAAGCAGCTAATGCTATaGCCACACTCGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVKQLML*PHSPSG
Trigger: GCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAAGCAGCTAATGCTATaGCCACACTCGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKKQLML*PHSPSG
Trigger: GCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTACGAGACAAACAGAATaGAAGACTGTCACACGCGGC +
Preference number: 4 (lower is better)
Translates to: TTRLTKRWEIPVMALFVGTRQTE*KTVTRG
Trigger: GCCGCGTGTGACAGTCTTGCATTCTGTTTGTCTCGT...ACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCATCGGAGAGCCGCATaGCATAGAGATACTTGTCAA +
Preference number: 4 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGHRRAA*HRDTCQ
Trigger: TTGACAAGTATCTCTATGCCATGCGGCTCTCCGATG...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCTTGACTGTGGCTGTTaGATTAAAATCCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWLDCGC*IKIPGE
Trigger: CTCTCCCGGGATTTTAATCCAACAGCCACAGTCAAG...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCCAGAGCCATCAGGAATaGACCTTACGAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGQSHQE*TLRMLA
Trigger: TGCCAACATTCGTAAGGTCCATTCCTGATGGCTCTG...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTGTGCACGATGTTCTCTaGGGTGTCATAAACCTCGGA +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPVHDVL*GVINLG
Trigger: TCCGAGGTTTATGACACCCCAGAGAACATCGTGCAC...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCCCACAGCTACGATGTTaGCATCATAGTCCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGPQLRC*HHSPLA
Trigger: AGCGAGGGGACTATGATGCCAACATCGTAGCTGTGG...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAACCACAGCTACGATGTTaGCATCATAGTCCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKPQLRC*HHSPLA
Trigger: AGCGAGGGGACTATGATGCCAACATCGTAGCTGTGG...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTGGGTCAGGATTTCTTTaGCATTGTGGAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TTRLTKRWEIPVMALFVGGSGFL*HCGGLP
Trigger: AGGAAGGCCTCCACAATGCCAAAGAAATCCTGACCC...ACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGCCGTGGTCCGCAGCCTaGGTGTGCCCTTGTTATCAC +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVPWSAA*VCPCYH
Trigger: GTGATAACAAGGGCACACCCAGGCTGCGGACCACGG...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGACGCCGGGAATACTGTaGGTGCGTCTTGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRTPGIL*VRLVKR
Trigger: TCTCTTTACAAGACGCACCCACAGTATTCCCGGCGT...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGACGCCGGGAATACTGTaGGTGCGTCTTGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQTPGIL*VRLVKR
Trigger: TCTCTTTACAAGACGCACCCACAGTATTCCCGGCGT...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAAATGAGACAATGGTGCAAACGTGCTGGACTGAGACACAGTCATCATCGGACGACGCCGGGAATACTGTaGGTGCGTCTTGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: EMRQWCKRAGLRHSHHRTTPGIL*VRLVKR
Trigger: TCTCTTTACAAGACGCACCCACAGTATTCCCGGCGT...CGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACGCCGGGAATACTGTaGGTGCGTCTTGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPTPGIL*VRLVKR
Trigger: TCTCTTTACAAGACGCACCCACAGTATTCCCGGCGT...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTACCACCGCCGTCACCATaGCAGCCCCCTTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLPPPSP*QPPCRC
Trigger: GCAGCGGCAAGGGGGCTGCCATGGTGACGGCGGTGG...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATTCTGGAGAAGTGTaGATGAAGCTTGTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHDSGEV*MKLVEC
Trigger: ACACTCTACAAGCTTCATCCACACTTCTCCAGAATC...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATAGTTCCTTCACCGTCTaGTGCATGATTCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYSSFTV*CMILEK
Trigger: CTTCTCCAGAATCATGCACCAGACGGTGAAGGAACT...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCTCAATCTTTTTGACCTaGTCATCCTTCAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGSIFLT*SSFSSV
Trigger: CACGGAGCTGAAGGATGACCAGGTCAAAAAGATTGA...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359426.7
CDS-3UTR CCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGAGAAGGCCTGTCAGGTaGTGTGATTTTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWRRPVR*CDFPSP
Trigger: TGGAGATGGAAAATCACACCACCTGACAGGCCTTCT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCCGGCTCACAAAGCGGTaGGAAATTCCAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGRLTKR*EIPVMA
Trigger: TGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCG...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTAGATGTTTCAGGGGCTaGCCTGTCCAAACACAGCAA +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPRCFRG*PVQTQQ
Trigger: TTGCTGTGTTTGGACAGGCCAGCCCCTGAAACATCT...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCGAAGTCCTTGTTGCATaGTTGCTGGTCTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGEVLVA*LLVLPI
Trigger: AATAGGCAAGACCAGCAACCATGCAACAAGGACTTC...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CCA 90 bp ACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTGGCACAAAGCAGGTGTaGGTAGGTGTTTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: TTRLTKRWEIPVMALFVGGTKQV*VGVWTL
Trigger: AAGAGTCCAAACACCTACCCACACCTGCTTTGTGCC...ACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCACTTGCAATCCAACTGTaGATTCTTGGCACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPLAIQL*ILGTKQ
Trigger: CTGCTTTGTGCCAAGAATCCACAGTTGGATTGCAAG...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGAACAGTTCTTTAGTTaGTTAGTTGAAGTCCACACA +
Preference number: 4 (lower is better)
Translates to: YTISWILLSSPRRQALAPEQFFS*LVEVHT
Trigger: TGTGTGGACTTCAACTAACCAACTAAAGAACTGTTC...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643399.2
CDS-3UTR CCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGCTCACCTTTTTGACCTaGTCATCCTTCAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLLTFLT*SSFSSV
Trigger: CACGGAGCTGAAGGATGACCAGGTCAAAAAGGTGAG...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTAGGCACTCAGCAACATaGTCAAAAAGCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPRHSAT*SKSWLP
Trigger: TGGAAGCCAGCTTTTTGATCATGTTGCTGAGTGCCT...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCGCTTTGTCCAGGTaGTCAGGATGGCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKIALSR*SGWPHL
Trigger: TAGATGAGGCCATCCTGATCACCTGGACAAAGCGAT...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATCGCTTTGTCCAGGTaGTCAGGATGGCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVIALSR*SGWPHL
Trigger: TAGATGAGGCCATCCTGATCACCTGGACAAAGCGAT...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGCTCCCCATTCTGTATTaGTACACATCCTCCCCTCGT +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVLPILY*YTSSPR
Trigger: ACGAGGGGAGGATGTGTATCAATACAGAATGGGGAG...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TCTCATACCTTTGTTTCCCAGCATTTAGGGAATATTCGTCCACCAGTCTGTCGTAGGGAAATGAGAACGTaGAGCCCAGAGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: SHTFVSQHLGNIRPPVCRREMRT*SPEASW
Trigger: CCAGGATGCCTCTGGGCTTCACGTTCTCATTTCCCT...ACGACAGACTGGTGGACGAATATTCCCTAAATGCTGGGAAACAAAGGTATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACATCCCTTAGTAAGGTaGCTACATCGTGGCCCACGC +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKHPLVR*LHRGPR
Trigger: GCGTGGGCCACGATGTAGTCACCTTACTAAGGGATG...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGTGTCGTAGTGTGTCCTaGTATCATCCAGACACCCGT +
Preference number: 4 (lower is better)
Translates to: LYPTIYTISWILLSSPRRCRSVS*YHPDTR
Trigger: ACGGGTGTCTGGATGATATCAGGACACACTACGACA...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCGGGGGCTCACCTTTTTaGCCTGGTCATCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVGGSPF*PGHPSA
Trigger: AGCTGAAGGATGACCAGGTCAAAAAGGTGAGCCCCC...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR GCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCGCCCACGCAGTCTGTTaGCTTAAAACCCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGAHAVC*LKTLCP
Trigger: TGGACAAAGGGTTTTAAGGCAACAGACTGCGTGGGC...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGAGTCGATTAAGATGTTaGGGACGATTTCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGSRLRC*GRFHPG
Trigger: ACCTGGGTGAAATCGTCCGCAACATCTTAATCGACT...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGTCGATTAAGATGTTaGGGACGATTTCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGSRLRC*GRFHPG
Trigger: ACCTGGGTGAAATCGTCCGCAACATCTTAATCGACT...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACTATTCAGACCTAGCTaGTGGAGGATAGCCCGGACC +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKLFRPS*WRIART
Trigger: GGTCCGGGCTATCCTCCAGCAGCTAGGTCTGAATAG...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTTACTGTCATCGCAGGTaGTATTCAGACCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPYCHRR*YSDLAA
Trigger: AGCAGCTAGGTCTGAATAGCACCTGCGATGACAGTA...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGTCCTTCACCGTCTGGTaGATGATTCTGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLSFTVW*MILEKC
Trigger: ACACTTCTCCAGAATCATGCACCAGACGGTGAAGGA...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCATCCTTCACCGTCTGGTaGATGATTCTGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVASFTVW*MILEKC
Trigger: ACACTTCTCCAGAATCATGCACCAGACGGTGAAGGA...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TCTCATACCTTTGTTTCCCAGCATTTAGGGAATATTCGTCCACCAGTCTGTCGTTCCCGGACTCTTAGCTaGTTGCCTCTGTGCGTAACC +
Preference number: 4 (lower is better)
Translates to: SHTFVSQHLGNIRPPVCRSRTLS*LPLCVT
Trigger: GGTTACGCACAGAGGCAAGCAGCTAAGAGTCCGGGA...ACGACAGACTGGTGGACGAATATTCCCTAAATGCTGGGAAACAAAGGTATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR GCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACACGAGACAAACAGAATaGAAGACTGTCACACGCGGC +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYTRQTE*KTVTRG
Trigger: GCCGCGTGTGACAGTCTTGCATTCTGTTTGTCTCGT...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAACGAGACAAACAGAATaGAAGACTGTCACACGCGGC +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKTRQTE*KTVTRG
Trigger: GCCGCGTGTGACAGTCTTGCATTCTGTTTGTCTCGT...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCTTTTGGTTTTTCAGCTaGTGTAGCCGATTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGFWFFS*CSRFSL
Trigger: CAGCGAGAATCGGCTACAGCAGCTGAAAAACCAAAA...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAAAATGCCAGCTATGTaGTCCCACAGGGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGKMPAM*SHRVPV
Trigger: GACTGGAACCCTGTGGGAGCACATAGCTGGCATTTT...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643399.2
CDS-3UTR GCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGGCTTTCCTTGCGCCCTaGAGTCCAACTCGATGCTGG +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVAFLAP*SPTRCW
Trigger: CCAGCATCGAGTTGGACTGCAGGGCGCAAGGAAAGC...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGACCTTACGAATGTTaGCAACATCTTGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQGPYEC*QHLDCG
Trigger: GCCACAGTCAAGATGTTGCCAACATTCGTAAGGTCC...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGGTGCACGATGTTCTCTaGGGTGTCATAAACCTCGGA +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVVHDVL*GVINLG
Trigger: TCCGAGGTTTATGACACCCCAGAGAACATCGTGCAC...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATGGCCTCATCTATTTTaGATTGTTGGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAWPHLF*IVGKEK
Trigger: CTTTTCCTTGCCAACAATCCAAAATAGATGAGGCCA...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAATGGTGCAAACGTGCTaGACTGAGACACAGTCATCA +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVAMVQTC*TETQSS
Trigger: TGATGACTGTGTCTCAGTCCAGCACGTTTGCACCAT...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAAGCGAAATGAGACAATaGTGCAAACGTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVASEMRQ*CKRAGL
Trigger: CAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCT...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACTGGCAGCCACCAAGTTaGCTGAGCGAAATGAGACAA +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYWQPPS*LSEMRQ
Trigger: TTGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCA...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACACGCCGGGAATACTGTaGGTGCGTCTTGTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYTPGIL*VRLVKR
Trigger: TCTCTTTACAAGACGCACCCACAGTATTCCCGGCGT...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCCGCCTTAGAGTCTTGTaGAAACGCCGGGAATACTGT +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGRLRVL*KRREYC
Trigger: ACAGTATTCCCGGCGTTTCCACAAGACTCTAAGGCG...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGCGCCTTAGAGTCTTGTaGAAACGCCGGGAATACTGT +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVRLRVL*KRREYC
Trigger: ACAGTATTCCCGGCGTTTCCACAAGACTCTAAGGCG...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCGTCCAACCTCACAGGTaGGCTCCTCATAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVVQPHR*APHKHR
Trigger: CCTGTGCTTATGAGGAGCCCACCTGTGAGGTTGGAC...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGACTACACTTCACACGTaGGGGACCAGGTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRTTLHT*GTRSKS
Trigger: TGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACTACACTTCACACGTaGGGGACCAGGTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPTTLHT*GTRSKS
Trigger: TGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAAATGAGACAATGGTGCAAACGTGCTGGACTGAGACACAGTCATCATCGGACGACTACACTTCACACGTaGGGGACCAGGTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: EMRQWCKRAGLRHSHHRTTTLHT*GTRSKS
Trigger: TGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT...CGTCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CCA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGCATTGTTTGTTGGTTaGTTCCTTTTATCCAAATGG +
Preference number: 4 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPALFVG*FLLSKW
Trigger: CCATTTGGATAAAAGGAACCAACCAACAAACAATGC...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAACGGCTCACAAAGCGGTaGGAAATTCCAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKRLTKR*EIPVMA
Trigger: TGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCG...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAGATGTTTCAGGGGCTaGCCTGTCCAAACACAGCAA +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYRCFRG*PVQTQQ
Trigger: TTGCTGTGTTTGGACAGGCCAGCCCCTGAAACATCT...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CCA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCATTGTTGCATGGTTGCTaGTCTTGCCTATTAAACTTT +
Preference number: 4 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPLLHGC*SCLLNF
Trigger: AAAGTTTAATAGGCAAGACCAGCAACCATGCAACAA...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGGAAGTCCTTGTTGCATaGTTGCTGGTCTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWEVLVA*LLVLPI
Trigger: AATAGGCAAGACCAGCAACCATGCAACAAGGACTTC...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR TCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCCAAGATCCAGGGCAATaGAATCTCCCTTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGQDPGQ*NLPFQS
Trigger: GCTCTGAAAAGGGAGATTTCATTGCCCTGGATCTTG...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACCAAGATCCAGGGCAATaGAATCTCCCTTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYQDPGQ*NLPFQS
Trigger: GCTCTGAAAAGGGAGATTTCATTGCCCTGGATCTTG...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGACCTCGGACTCCATGTaGACATTCTGGTTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLTSDSM*TFWFFS
Trigger: TGAGAAAAACCAGAATGTTCACATGGAGTCCGAGGT...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAAAGGAAAAGAAAACGTaGATCCCACAGGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPKEKKT*IPQVTS
Trigger: AGAAGTTACCTGTGGGATTCACGTTTTCTTTTCCTT...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCATTCTTTTCGATGGCTaGCACATCACTGGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGILFDG*HITGVK
Trigger: TTTAACACCAGTGATGTGTCAGCCATCGAAAAGAAT...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCTTGGTGAGGTGGAAATaGGCCAGGGTCTCCTCTATC +
Preference number: 4 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVLVRWK*ARVSSI
Trigger: GATAGAGGAGACCCTGGCTCATTTCCACCTCACCAA...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAAACCCTTTGTCCACGTaGTCAAGATTCCCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKNPLST*SRFPRP
Trigger: TGGACGCGGGAATCTTGATCACGTGGACAAAGGGTT...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGGGAATCCCTTCTTGGTaGAGTCGATTAAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLGIPSW*SRLRCC
Trigger: GCAACATCTTAATCGACTTCACCAAGAAGGGATTCC...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGAATCCCTTCTTGGTaGAGTCGATTAAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQGIPSW*SRLRCC
Trigger: GCAACATCTTAATCGACTTCACCAAGAAGGGATTCC...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAACGGTCACTCTCGATCTaGGAGAGAAACTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKRSLSI*ERNLVS
Trigger: TGAGACCAAGTTTCTCTCTCAGATCGAGAGTGACCG...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACCACGTTACATTTTGGTaGCAGTTCCTTCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYHVTFW*QFLHRL
Trigger: CAGACGGTGAAGGAACTGTCACCAAAATGTAACGTG...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAACACGTTACATTTTGGTaGCAGTTCCTTCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKHVTFW*QFLHRL
Trigger: CAGACGGTGAAGGAACTGTCACCAAAATGTAACGTG...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAGAGGAGGGATCCGGGTaGGAGATATTATCAACAGCA +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKEEGSG*EILSTA
Trigger: TGCTGTTGATAATATCTCTCACCCGGATCCCTCCTC...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAACGATTTTGTGGCATTaGCACACCACGATGCGATGC +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKTILWH*HTTMRC
Trigger: GCATCGCATCGTGGTGTGTCAATGCCACAAAATCGT...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACCTTTCAGCAAGTAGATaGAGTTTTGGTTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHLSASR*SFGFSA
Trigger: AGCTGAAAAACCAAAACTTCATCTACTTGCTGAAAG...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCACAATGGTGCAAACGTaGTGGACTGAGACACAGTCA +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGTMVQT*WTETQS
Trigger: TGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGT...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTGAAATGAGACAATGGTaGAAACGTGCTGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: TTRLTKRWEIPVMALFVGEMRQW*KRAGLR
Trigger: TCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC...ACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATCCAAGAAGTCAGAGATaGAGGAGACAATGTGATCAA +
Preference number: 4 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYPRSQR*RRQCDQ
Trigger: TTGATCACATTGTCTCCTGCATCTCTGACTTCTTGG...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCCCAAGAAGTCAGAGATaGAGGAGACAATGTGATCAA +
Preference number: 4 (lower is better)
Translates to: LQYIPLVGFCFPPRAGRPPRSQR*RRQCDQ
Trigger: TTGATCACATTGTCTCCTGCATCTCTGACTTCTTGG...GGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGAGTCGATTAAGATGTTaGGGACGATTTCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLSRLRC*GRFHPG
Trigger: ACCTGGGTGAAATCGTCCGCAACATCTTAATCGACT...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAACTTGGTCTCAAAGATaGCCCGGGTCTTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKTWSQR*PGSSAS
Trigger: AGACGCTGAAGACCCGGGGCATCTTTGAGACCAAGT...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTAGCTGCTTGCCTCTGTaGGTAACCGCACGCCCACGG +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLSCLPL*VTARPR
Trigger: CCGTGGGCGTGCGGTTACGCACAGAGGCAAGCAGCT...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCTACATTAGAAATGGATaGCACTACACTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGYIRNG*HYTSHV
Trigger: CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTA...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAAGTTAACCCTCCATTaGCCAAGATGTTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKKLTLH*PRCFRG
Trigger: GCCCCTGAAACATCTTGGGCAATGGAGGGTTAACTT...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR GCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGTCCTTGTTGCATGGTTaGTGGTCTTGCCTATTAAAC +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWSLLHG*WSCLLN
Trigger: GTTTAATAGGCAAGACCAGCAACCATGCAACAAGGA...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR GCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGCCTTCTCAGGAACAATaGTCTGGGGAACAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQPSQEQ*SGEQFF
Trigger: AAAGAACTGTTCCCCAGAGCATTGTTCCTGAGAAGG...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGGGACCTTACGAATGTTaGCAACATCTTGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: LYPTIYTISWILLSSPRRGPYEC*QHLDCG
Trigger: GCCACAGTCAAGATGTTGCCAACATTCGTAAGGTCC...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGGGACCTTACGAATGTTaGCAACATCTTGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVGPYEC*QHLDCG
Trigger: GCCACAGTCAAGATGTTGCCAACATTCGTAAGGTCC...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCCCACAGCTACGATGTTaGCATCATAGTCCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVPQLRC*HHSPLA
Trigger: AGCGAGGGGACTATGATGCCAACATCGTAGCTGTGG...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAACGCCTTAGAGTCTTGTaGAAACGCCGGGAATACTGT +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKRLRVL*KRREYC
Trigger: ACAGTATTCCCGGCGTTTCCACAAGACTCTAAGGCG...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATGATTCTGGAGAAGTGTaGATGAAGCTTGTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYDSGEV*MKLVEC
Trigger: ACACTCTACAAGCTTCATCCACACTTCTCCAGAATC...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAGTTCCTTCACCGTCTaGTGCATGATTCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKSSFTV*CMILEK
Trigger: CTTCTCCAGAATCATGCACCAGACGGTGAAGGAACT...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAGAAGGCCTGTCAGGTaGTGTGATTTTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYRRPVR*CDFPSP
Trigger: TGGAGATGGAAAATCACACCACCTGACAGGCCTTCT...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGGTGTGGGTAGGTGTTTaGACTCTTTTCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LYPTIYTISWILLSSPRRVWVGV*TLFLLR
Trigger: CCTGAGAAGGAAAAGAGTCCAAACACCTACCCACAC...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCTGCTTGTTCTTCATTTaGGCTCACTCTCATTTTTCC +
Preference number: 4 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGCLFFI*AHSHFS
Trigger: GGAAAAATGAGAGTGAGCCCAAATGAAGAACAAGCA...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR CCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCTACTCTCAACAGCTaGGTCTTGAACGCACTGTCC +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKSTLNS*VLNALS
Trigger: GGACAGTGCGTTCAAGACCCAGCTGTTGAGAGTAGA...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436817.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGACCTCGGACTCCATGTaGACATTCTGGTTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LYPTIYTISWILLSSPRRTSDSM*TFWFFS
Trigger: TGAGAAAAACCAGAATGTTCACATGGAGTCCGAGGT...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACACCTCGGACTCCATGTaGACATTCTGGTTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYTSDSM*TFWFFS
Trigger: TGAGAAAAACCAGAATGTTCACATGGAGTCCGAGGT...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACTCCCCATTCTGTATTaGTACACATCCTCCCCTCGT +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKLPILY*YTSSPR
Trigger: ACGAGGGGAGGATGTGTATCAATACAGAATGGGGAG...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCATTCTTTTCGATGGCTaGCACATCACTGGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: LQYIPLVGFCFPPRAGRPILFDG*HITGVK
Trigger: TTTAACACCAGTGATGTGTCAGCCATCGAAAAGAAT...GGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCTGTCGTAGTGTGTCCTaGTATCATCCAGACACCCGT +
Preference number: 4 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVCRSVS*YHPDTR
Trigger: ACGGGTGTCTGGATGATATCAGGACACACTACGACA...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAGAGGAGGGATCCGGGTaGGAGATATTATCAACAGCA +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKEEGSG*EILSTA
Trigger: TGCTGTTGATAATATCTCTCACCCGGATCCCTCCTC...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCGGTGGGAAATTCCAGTaGTGGCATTGTTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGGGKFQ*WHCLLV
Trigger: AACCAACAAACAATGCCATCACTGGAATTTCCCACC...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAACAATGGTGCAAACGTaGTGGACTGAGACACAGTCA +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKTMVQT*WTETQS
Trigger: TGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGT...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGTCTTCCCCAGTGCCCTaGATGATTTCAATAGGAATG +
Preference number: 4 (lower is better)
Translates to: LYPTIYTISWILLSSPRRSSPVP*MISIGM
Trigger: CATTCCTATTGAAATCATGCAGGGCACTGGGGAAGA...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGTCTTCCCCAGTGCCCTaGATGATTTCAATAGGAATG +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVSSPVP*MISIGM
Trigger: CATTCCTATTGAAATCATGCAGGGCACTGGGGAAGA...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGACTTGGTCTCAAAGATaGCCCGGGTCTTCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVTWSQR*PGSSAS
Trigger: AGACGCTGAAGACCCGGGGCATCTTTGAGACCAAGT...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATACTGTCATCGCAGGTaGTATTCAGACCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKYCHRR*YSDLAA
Trigger: AGCAGCTAGGTCTGAATAGCACCTGCGATGACAGTA...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTACACACCACGATGCGATaGCAGGCCACAGTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLHTTMR*QATVGA
Trigger: GGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTG...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCTCGGGTCCTTTCTTCTaGTTTTCTACTCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGSGPFF*FSTLNS
Trigger: GCTGTTGAGAGTAGAAAAGCAGAAGAAAGGACCCGA...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCTCGCTGGCAGATCTaGCCCATTGTGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLSRWQI*PIVGRA
Trigger: TGCCCTCCCCACAATGGGGCAGATCTGCCAGCGAGA...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCATTGTCAATAAAATCATaGAGGGCTCTTTTTGCCATC +
Preference number: 4 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPLSIKS*RALFAI
Trigger: GATGGCAAAAAGAGCCCTGCATGATTTTATTGACAA...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360289.6
CDS-3UTR GCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTTTCAATTCTCTTTTGTaGAAAACTCCAGACGCCGTC +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPFNSLL*KTPDAV
Trigger: GACGGCGTCTGGAGTTTTGCACAAAAGAGAATTGAA...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643399.2
CDS-3UTR CCA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTGGCCTCATCTATTTTaGATTGTTGGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYWPHLF*IVGKEK
Trigger: CTTTTCCTTGCCAACAATCCAAAATAGATGAGGCCA...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGTGGCCTCATCTATTTTaGATTGTTGGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGWPHLF*IVGKEK
Trigger: CTTTTCCTTGCCAACAATCCAAAATAGATGAGGCCA...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCGGGTCAGGATTTCTTTaGCATTGTGGAGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVGSGFL*HCGGLP
Trigger: AGGAAGGCCTCCACAATGCCAAAGAAATCCTGACCC...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAATGGTGCAAACGTGCTaGACTGAGACACAGTCATCA +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKMVQTC*TETQSS
Trigger: TGATGACTGTGTCTCAGTCCAGCACGTTTGCACCAT...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGAGATGGCGCCCAGTGTaGCAGCCACCAAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWRWRPV*QPPSWL
Trigger: CAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCT...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACGCCTTAGAGTCTTGTaGAAACGCCGGGAATACTGT +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKRLRVL*KRREYC
Trigger: ACAGTATTCCCGGCGTTTCCACAAGACTCTAAGGCG...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTGCTTGTTCTTCATTTaGGCTCACTCTCATTTTTCC +
Preference number: 4 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYCLFFI*AHSHFS
Trigger: GGAAAAATGAGAGTGAGCCCAAATGAAGAACAAGCA...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR TCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACAAGATCCAGGGCAATaGAATCTCCCTTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKQDPGQ*NLPFQS
Trigger: GCTCTGAAAAGGGAGATTTCATTGCCCTGGATCTTG...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GGACTCCATGTGAACATTCTGGTTTTTCTCATGATTCACTTGCACCCGCAGAATAGGCACTCAGCAACATaGTCAAAAAGCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLHVNILVFLMIHLHPQNRHSAT*SKSWLP
Trigger: TGGAAGCCAGCTTTTTGATCATGTTGCTGAGTGCCT...ATTCTGCGGGTGCAAGTGAATCATGAGAAAAACCAGAATGTTCACATGGAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGAAGGAAAAGAAAACGTaGATCCCACAGGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQKEKKT*IPQVTS
Trigger: AGAAGTTACCTGTGGGATTCACGTTTTCTTTTCCTT...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGAAGGAAAAGAAAACGTaGATCCCACAGGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLKEKKT*IPQVTS
Trigger: AGAAGTTACCTGTGGGATTCACGTTTTCTTTTCCTT...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGCTCCCCATTCTGTATTaGTACACATCCTCCCCTCGT +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVLPILY*YTSSPR
Trigger: ACGAGGGGAGGATGTGTATCAATACAGAATGGGGAG...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGATTCTTTTCGATGGCTaGCACATCACTGGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRILFDG*HITGVK
Trigger: TTTAACACCAGTGATGTGTCAGCCATCGAAAAGAAT...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAGGAATCCCTTCTTGGTaGAGTCGATTAAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKGIPSW*SRLRCC
Trigger: GCAACATCTTAATCGACTTCACCAAGAAGGGATTCC...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACACGTTACATTTTGGTaGCAGTTCCTTCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKHVTFW*QFLHRL
Trigger: CAGACGGTGAAGGAACTGTCACCAAAATGTAACGTG...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTGGCTTCCACTGCCGTaGACGATGTTCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLWLPLP*TMFSGV
Trigger: CACCCCAGAGAACATCGTGCACGGCAGTGGAAGCCA...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTATCCGCAGCCTGGGTGTaGCCTTGTTATCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLSAAWV*PCYHAG
Trigger: GCCTGCGTGATAACAAGGGCACACCCAGGCTGCGGA...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAAGGGTCTCCTCTATCTaGCGGTGCTGCTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLRVSSI*RCCSAK
Trigger: CTTGGCCGAGCAGCACCGGCAGATAGAGGAGACCCT...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCTCCTTCACCGTCTGGTaGATGATTCTGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVSFTVW*MILEKC
Trigger: ACACTTCTCCAGAATCATGCACCAGACGGTGAAGGA...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTTACATTAGAAATGGATaGCACTACACTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPYIRNG*HYTSHV
Trigger: CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTA...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGACGAGACAAACAGAATaGAAGACTGTCACACGCGGC +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVTRQTE*KTVTRG
Trigger: GCCGCGTGTGACAGTCTTGCATTCTGTTTGTCTCGT...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAGGTCTTGAACGCCTTTaGTTGTTCTTCATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKGLERL*LFFIWA
Trigger: AGCCCAAATGAAGAACAAGCAAAGGCGTTCAAGACC...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR CCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCCTTGACTGTGGCTGTTaGATTAAAATCCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVLDCGC*IKIPGE
Trigger: CTCTCCCGGGATTTTAATCCAACAGCCACAGTCAAG...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TCTCATACCTTTGTTTCCCAGCATTTAGGGAATATTCGTCCACCAGTCTGTCGTCAGAGCCATCAGGAATaGACCTTACGAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SHTFVSQHLGNIRPPVCRQSHQE*TLRMLA
Trigger: TGCCAACATTCGTAAGGTCCATTCCTGATGGCTCTG...ACGACAGACTGGTGGACGAATATTCCCTAAATGCTGGGAAACAAAGGTATGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGATTTCTTTGGCATTGTaGAGGCCTTCCTTATTCTTT +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWISLAL*RPSLFF
Trigger: AAAGAATAAGGAAGGCCTCCACAATGCCAAAGAAAT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCAGCGAAATGAGACAATaGTGCAAACGTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVSEMRQ*CKRAGL
Trigger: CAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCT...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGACTCCATGTGAACATTCTGGTTTTTCTCATGATTCACTTGCACCCGCAGAATAGCGAAATGAGACAATaGTGCAAACGTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: GLHVNILVFLMIHLHPQNSEMRQ*CKRAGL
Trigger: CAGTCCAGCACGTTTGCACCATTGTCTCATTTCGCT...ATTCTGCGGGTGCAAGTGAATCATGAGAAAAACCAGAATGTTCACATGGAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAAGATGGCGCCCAGTGTaGCAGCCACCAAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLRWRPV*QPPSWL
Trigger: CAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCT...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGGATTCTGGAGAAGTGTaGATGAAGCTTGTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVDSGEV*MKLVEC
Trigger: ACACTCTACAAGCTTCATCCACACTTCTCCAGAATC...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAAGTTCCTTCACCGTCTaGTGCATGATTCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKSSFTV*CMILEK
Trigger: CTTCTCCAGAATCATGCACCAGACGGTGAAGGAACT...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGATATATACCATTAGTTaGATTTTGCTTTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWIYTIS*ILLSSP
Trigger: CGGGGAGGAAAGCAAAATCCAACTAATGGTATATAT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGGCATTGTTTGTTGGTTaGTTCCTTTTATCCAAATGG +
Preference number: 4 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGALFVG*FLLSKW
Trigger: CCATTTGGATAAAAGGAACCAACCAACAAACAATGC...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGGATGGCATTGTTTGTTaGTTGGTTCCTTTTATCCAA +
Preference number: 4 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGDGIVC*LVPFIQ
Trigger: TTGGATAAAAGGAACCAACCAACAAACAATGCCATC...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGCACAAAGCAGGTGTaGGTAGGTGTTTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVGTKQV*VGVWTL
Trigger: AAGAGTCCAAACACCTACCCACACCTGCTTTGTGCC...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
3UTR CAA 72 bp CTCCATGTGAACATTCTGGTTTTTCTCATGATTCACTaGCACCCGCAGAATTCGAAAGGAAGACCCACCAAG +
Preference number: 4 (lower is better)
Translates to: LHVNILVFLMIH*HPQNSKGRPTK
Trigger: CTTGGTGGGTCTTCCTTTCGAATTCTGCGGGTGCAAGTGAATCATGAGAAAAACCAGAATGTTCACATGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATTCTTTTCGATGGCTaGCACATCACTGGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKILFDG*HITGVK
Trigger: TTTAACACCAGTGATGTGTCAGCCATCGAAAAGAAT...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTACCCCGCACACTGTCTTaGCGAGGATACTGTCATCGC +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLPRTLS*RGYCHR
Trigger: GCGATGACAGTATCCTCGTCAAGACAGTGTGCGGGG...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAATCTTCCCCAGTGCCCTaGATGATTTCAATAGGAATG +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKSSPVP*MISIGM
Trigger: CATTCCTATTGAAATCATGCAGGGCACTGGGGAAGA...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTAGCGTCTCAGAGATCTaGCCTCGGAAGAGGAATCCC +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLSVSEI*PRKRNP
Trigger: GGGATTCCTCTTCCGAGGGCAGATCTCTGAGACGCT...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCTACATTAGAAATGGATaGCACTACACTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGYIRNG*HYTSHV
Trigger: CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTA...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTGACACACCACGATaGGATGCCAGGCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWIDTPR*DARPQW
Trigger: CCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAAT...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAATGGCCTCATCTATTTTaGATTGTTGGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKWPHLF*IVGKEK
Trigger: CTTTTCCTTGCCAACAATCCAAAATAGATGAGGCCA...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGATATATACCATTAGTTaGATTTTGCTTTCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRIYTIS*ILLSSP
Trigger: CGGGGAGGAAAGCAAAATCCAACTAATGGTATATAT...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTGCATTGTTTGTTGGTTaGTTCCTTTTATCCAAATGG +
Preference number: 4 (lower is better)
Translates to: GGIRVRDIINSTRSILYPALFVG*FLLSKW
Trigger: CCATTTGGATAAAAGGAACCAACCAACAAACAATGC...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGGATGGCATTGTTTGTTaGTTGGTTCCTTTTATCCAA +
Preference number: 4 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLDGIVC*LVPFIQ
Trigger: TTGGATAAAAGGAACCAACCAACAAACAATGCCATC...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAGAAGTCCTTGTTGCATaGTTGCTGGTCTTGCCTATT +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKEVLVA*LLVLPI
Trigger: AATAGGCAAGACCAGCAACCATGCAACAAGGACTTC...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CCA 90 bp CTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCGAACAGTTCTTTAGTTaGTTAGTTGAAGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LQYIPLVGFCFPPRAGRPEQFFS*LVEVLV
Trigger: AACAAGGACTTCAACTAACCAACTAAAGAACTGTTC...GGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR TCA 90 bp CGATGTTCTCTGGGGTGTCATAAACCTCGGACTCCATGTGAACATTCTGGTTTTATTCTTTTCGATGGCTaGCACATCACTGGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: RCSLGCHKPRTPCEHSGFILFDG*HITGVK
Trigger: TTTAACACCAGTGATGTGTCAGCCATCGAAAAGAAT...AAAACCAGAATGTTCACATGGAGTCCGAGGTTTATGACACCCCAGAGAACATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGGCAAACGTGCTGGACTaGGACACAGTCATCATCGGA +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWANVLD*DTVIIG
Trigger: TCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGC...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGAAGCAGCTAATGCTATaGCCACACTCGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWKQLML*PHSPSG
Trigger: GCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAATCCTTGTTGCATGGTTaGTGGTCTTGCCTATTAAAC +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKSLLHG*WSCLLN
Trigger: GTTTAATAGGCAAGACCAGCAACCATGCAACAAGGA...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR GCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGTCGGGTCCTTTCTTCTaGTTTTCTACTCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVSGPFF*FSTLNS
Trigger: GCTGTTGAGAGTAGAAAAGCAGAAGAAAGGACCCGA...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATGGCCTCATCTATTTTaGATTGTTGGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKWPHLF*IVGKEK
Trigger: CTTTTCCTTGCCAACAATCCAAAATAGATGAGGCCA...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACGCATTGTTTGTTGGTTaGTTCCTTTTATCCAAATGG +
Preference number: 4 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYALFVG*FLLSKW
Trigger: CCATTTGGATAAAAGGAACCAACCAACAAACAATGC...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGCGGCTCACAAAGCGGTaGGAAATTCCAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWRLTKR*EIPVMA
Trigger: TGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCG...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp TCTCATACCTTTGTTTCCCAGCATTTAGGGAATATTCGTCCACCAGTCTGTCGTAAGGAAAAGAAAACGTaGATCCCACAGGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: SHTFVSQHLGNIRPPVCRKEKKT*IPQVTS
Trigger: AGAAGTTACCTGTGGGATTCACGTTTTCTTTTCCTT...ACGACAGACTGGTGGACGAATATTCCCTAAATGCTGGGAAACAAAGGTATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR TCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTACCTCCTTGGCCATCTTaGCTAGGATCAGTCGAACCA +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLPPWPS*LGSVEP
Trigger: TGGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGG...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAATTCTTTTCGATGGCTaGCACATCACTGGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKILFDG*HITGVK
Trigger: TTTAACACCAGTGATGTGTCAGCCATCGAAAAGAAT...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGCAAACGTGCTGGACTaGGACACAGTCATCATCGGA +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLANVLD*DTVIIG
Trigger: TCCGATGATGACTGTGTCTCAGTCCAGCACGTTTGC...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTCGGTCACTCTCGATCTaGGAGAGAAACTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLRSLSI*ERNLVS
Trigger: TGAGACCAAGTTTCTCTCTCAGATCGAGAGTGACCG...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGGAGGAGGGATCCGGGTaGGAGATATTATCAACAGCA +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWEEGSG*EILSTA
Trigger: TGCTGTTGATAATATCTCTCACCCGGATCCCTCCTC...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTACGATTTTGTGGCATTaGCACACCACGATGCGATGC +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLTILWH*HTTMRC
Trigger: GCATCGCATCGTGGTGTGTCAATGCCACAAAATCGT...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAACTTTCAGCAAGTAGATaGAGTTTTGGTTTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKLSASR*SFGFSA
Trigger: AGCTGAAAAACCAAAACTTCATCTACTTGCTGAAAG...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAAAGCAGCTAATGCTATaGCCACACTCGCCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLKQLML*PHSPSG
Trigger: GCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTATGCAGGGCTCTTTTTaGCATCTTTCCACGCCACCA +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLMQGSF*HLSTPP
Trigger: TGGTGGCGTGGAAAGATGGCAAAAAGAGCCCTGCAT...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360289.6
CDS-3UTR CCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGGATTCTGGAGAAGTGTaGATGAAGCTTGTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVDSGEV*MKLVEC
Trigger: ACACTCTACAAGCTTCATCCACACTTCTCCAGAATC...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTCAAGATCCAGGGCAATaGAATCTCCCTTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLQDPGQ*NLPFQS
Trigger: GCTCTGAAAAGGGAGATTTCATTGCCCTGGATCTTG...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAATCGCTTTGTCCAGGTaGTCAGGATGGCCTCATCTA +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLIALSR*SGWPHL
Trigger: TAGATGAGGCCATCCTGATCACCTGGACAAAGCGAT...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGTACTGTCATCGCAGGTaGTATTCAGACCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWYCHRR*YSDLAA
Trigger: AGCAGCTAGGTCTGAATAGCACCTGCGATGACAGTA...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTTCACCGTCTGGTaGATGATTCTGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLSFTVW*MILEKC
Trigger: ACACTTCTCCAGAATCATGCACCAGACGGTGAAGGA...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAACGAGACAAACAGAATaGAAGACTGTCACACGCGGC +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLTRQTE*KTVTRG
Trigger: GCCGCGTGTGACAGTCTTGCATTCTGTTTGTCTCGT...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGAAGTTAACCCTCCATTaGCCAAGATGTTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWKLTLH*PRCFRG
Trigger: GCCCCTGAAACATCTTGGGCAATGGAGGGTTAACTT...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTGCTCACAGTCCATCTaGATATACACCCAGACTCCT +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLCSQSI*IYTQTP
Trigger: AGGAGTCTGGGTGTATATCCAGATGGACTGTGAGCA...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS-3UTR CCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGCAGAGCCATCAGGAATaGACCTTACGAATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWQSHQE*TLRMLA
Trigger: TGCCAACATTCGTAAGGTCCATTCCTGATGGCTCTG...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGTGGCCTCATCTATTTTaGATTGTTGGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVWPHLF*IVGKEK
Trigger: CTTTTCCTTGCCAACAATCCAAAATAGATGAGGCCA...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGACTACACTTCACACGTaGGGGACCAGGTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWTTLHT*GTRSKS
Trigger: TGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAGCATTGTTTGTTGGTTaGTTCCTTTTATCCAAATGG +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKALFVG*FLLSKW
Trigger: CCATTTGGATAAAAGGAACCAACCAACAAACAATGC...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAGATGGCATTGTTTGTTaGTTGGTTCCTTTTATCCAA +
Preference number: 4 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKDGIVC*LVPFIQ
Trigger: TTGGATAAAAGGAACCAACCAACAAACAATGCCATC...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGTTGCCTATTAAACTTTaGGAAGTTAACCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVLPIKL*EVNPPL
Trigger: CAATGGAGGGTTAACTTCTCAAAGTTTAATAGGCAA...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR GCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAACAATGGTGCAAACGTaGTGGACTGAGACACAGTCA +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLTMVQT*WTETQS
Trigger: TGACTGTGTCTCAGTCCAGCACGTTTGCACCATTGT...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGGAAATGAGACAATGGTaGAAACGTGCTGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWEMRQW*KRAGLR
Trigger: TCTCAGTCCAGCACGTTTGCACCATTGTCTCATTTC...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTATACTGTCATCGCAGGTaGTATTCAGACCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLYCHRR*YSDLAA
Trigger: AGCAGCTAGGTCTGAATAGCACCTGCGATGACAGTA...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGATTTCTTTGGCATTGTaGAGGCCTTCCTTATTCTTT +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVISLAL*RPSLFF
Trigger: AAAGAATAAGGAAGGCCTCCACAATGCCAAAGAAAT...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAAGTTCCTTCACCGTCTaGTGCATGATTCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLSSFTV*CMILEK
Trigger: CTTCTCCAGAATCATGCACCAGACGGTGAAGGAACT...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAAGAAGGCCTGTCAGGTaGTGTGATTTTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLRRPVR*CDFPSP
Trigger: TGGAGATGGAAAATCACACCACCTGACAGGCCTTCT...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGGATGGCATTGTTTGTTaGTTGGTTCCTTTTATCCAA +
Preference number: 4 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVDGIVC*LVPFIQ
Trigger: TTGGATAAAAGGAACCAACCAACAAACAATGCCATC...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTCTTGCAATCCAACTGTaGATTCTTGGCACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLLAIQL*ILGTKQ
Trigger: CTGCTTTGTGCCAAGAATCCACAGTTGGATTGCAAG...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGCTTGCAATCCAACTGTaGATTCTTGGCACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWLAIQL*ILGTKQ
Trigger: CTGCTTTGTGCCAAGAATCCACAGTTGGATTGCAAG...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTATCTACTCTCAACAGCTaGGTCTTGAACGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLSTLNS*VLNAFA
Trigger: AGCAAAGGCGTTCAAGACCCAGCTGTTGAGAGTAGA...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR TCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGGTGGGAAATTCCAGTaGTGGCATTGTTTGTTGGTT +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLGGKFQ*WHCLLV
Trigger: AACCAACAAACAATGCCATCACTGGAATTTCCCACC...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGCCAAGAAGTCAGAGATaGAGGAGACAATGTGATCAA +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWPRSQR*RRQCDQ
Trigger: TTGATCACATTGTCTCCTGCATCTCTGACTTCTTGG...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTCCAAGAAGTCAGAGATaGAGGAGACAATGTGATCAA +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLPRSQR*RRQCDQ
Trigger: TTGATCACATTGTCTCCTGCATCTCTGACTTCTTGG...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR GCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAAGTCGATTAAGATGTTaGGGACGATTTCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLSRLRC*GRFHPG
Trigger: ACCTGGGTGAAATCGTCCGCAACATCTTAATCGACT...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTACTTGCAATCCAACTGTaGATTCTTGGCACAAAGCAG +
Preference number: 4 (lower is better)
Translates to: EILSTAHALFCTLQYIPLLAIQL*ILGTKQ
Trigger: CTGCTTTGTGCCAAGAATCCACAGTTGGATTGCAAG...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTGGCCTCATCTATTTTaGATTGTTGGCAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLWPHLF*IVGKEK
Trigger: CTTTTCCTTGCCAACAATCCAAAATAGATGAGGCCA...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR TCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTTGCCTATTAAACTTTaGGAAGTTAACCCTCCATTG +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLLPIKL*EVNPPL
Trigger: CAATGGAGGGTTAACTTCTCAAAGTTTAATAGGCAA...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTATTTCTTTGGCATTGTaGAGGCCTTCCTTATTCTTT +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLISLAL*RPSLFF
Trigger: AAAGAATAAGGAAGGCCTCCACAATGCCAAAGAAAT...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CCA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTTGTTGCATGGTTGCTaGTCTTGCCTATTAAACTTT +
Preference number: 4 (lower is better)
Translates to: STRSILYPTIYTISWILLLLHGC*SCLLNF
Trigger: AAAGTTTAATAGGCAAGACCAGCAACCATGCAACAA...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CCA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGGAACAGTTCTTTAGTTaGTTAGTTGAAGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: IINSTRSILYPTIYTISWEQFFS*LVEVLV
Trigger: AACAAGGACTTCAACTAACCAACTAAAGAACTGTTC...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS GCA 90 bp AAGGCCGGGCGCCGGAGGATGGAGGCAGCGGAGGCGGCGAGCGGATaGCGGAACGCAAGGCTGCGGCCAGGACCAGCGGCGGCGCGGGCG +
Preference number: 5 (lower is better)
Translates to: KAGRRRMEAAEAASG*RNARLRPGPAAARA
Trigger: CGCCCGCGCCGCCGCTGGTCCTGGCCGCAGCCTTGCGTTCCGGCATCCGCTCGCCGCCTCCGCTGCCTCCATCCTCCGGCGCCCGGCCTT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS CCA 90 bp TGCGCGGCGATCATGCTGGCGGTCGGGGTCGCGGGGCGGCAGGCGTaGGGACGGTCGGTCCTCCGCAGCCCTGGCGAGCCGTGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: CAAIMLAVGVAGRQA*GRSVLRSPGEPWSS
Trigger: GGAGGACCACGGCTCGCCAGGGCTGCGGAGGACCGACCGTCCCCACGCCTGCCGCCCCGCGACCCCGACCGCCAGCATGATCGCCGCGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359426.7
ENST00000493591.6
CDS-3UTR CAA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGCAGATCTGCCCCATaGTGGGGAGGGCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: RRQALAPASPSATRWEGRGRSAP*WGGHLL
Trigger: CAGCAAGTGCCCTCCCCACAATGGGGCAGATCTGCC...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS CCA 90 bp TCGAAGGCGAAGGCTTTCCTTGCGCCCTGCAGTCCAACTCGATGCTaGCCCGGAGAAGGCCGGGCGCCGGAGGATGGAGGCAGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: SKAKAFLAPCSPTRC*PGEGRAPEDGGSGG
Trigger: GCCTCCGCTGCCTCCATCCTCCGGCGCCCGGCCTTCTCCGGGCCAGCATCGAGTTGGACTGCAGGGCGCAAGGAAAGCCTTCGCCTTCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CAA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTGTAGGGGGTCGCCGCTaGAAGAGAGAAGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGVGGRR*KREVLE
Trigger: CTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTAC...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGGTGGCAGCCACCAAGTaGGCTGAGCGAAATGAGACA +
Preference number: 5 (lower is better)
Translates to: ALAPASPSATRWEGRGSPVAATK*AERNET
Trigger: TGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCAC...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGACCCCGCACACTGTCTaGACGAGGATACTGTCATCG +
Preference number: 5 (lower is better)
Translates to: RRQALAPASPSATRWEGRTPHTV*TRILSS
Trigger: CGATGACAGTATCCTCGTCAAGACAGTGTGCGGGGT...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTGGCAGATCTGCCCCATaGTGGGGAGGGCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSGRSAP*WGGHLL
Trigger: CAGCAAGTGCCCTCCCCACAATGGGGCAGATCTGCC...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS GCA 90 bp GAATCGAAGGCGAAGGCTTTCCTTGCGCCCTGCAGTCCAACTCGATaGTGGCCCGGAGAAGGCCGGGCGCCGGAGGATGGAGGCAGCGGA +
Preference number: 5 (lower is better)
Translates to: ESKAKAFLAPCSPTR*WPGEGRAPEDGGSG
Trigger: TCCGCTGCCTCCATCCTCCGGCGCCCGGCCTTCTCCGGGCCAGCATCGAGTTGGACTGCAGGGCGCAAGGAAAGCCTTCGCCTTCGATTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CAA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGGGTTGTGGTAGAGTTTaGAGCCAGGACTCCAGCCTA +
Preference number: 5 (lower is better)
Translates to: ALAPASPSATRWEGRGSPGCGRV*SQDSSL
Trigger: TAGGCTGGAGTCCTGGCTCAAAACTCTACCACAACC...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS-3UTR CAA 90 bp GGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTAGCTGTTTTCCAGGGTaGAGGGATCCCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: GRPWRQRLPAQLAGRVGGSCFPG*RDPRSI
Trigger: GATAGACCGGGGATCCCTCAACCCTGGAAAACAGCT...ACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCCTCCTTGGCCATCTaGACTAGGATCAGTCGAACC +
Preference number: 5 (lower is better)
Translates to: QALAPASPSATRWEGRGSPSLAI*TRISRT
Trigger: GGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGGG...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGCCCGGCAGTGTCTAGCCTGGGTGTGCCCTaGTTATCACGCAGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: MPTLAFRQCPREGGPAVSSLGVP*LSRRRF
Trigger: GAACCGCCTGCGTGATAACAAGGGCACACCCAGGCT...AGACACTGCCGGGCCTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGG +
Preference number: 5 (lower is better)
Translates to: QALAPASPSATRWEGRGSTISWI*LSSPRR
Trigger: CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGAATAAGAGGCCCTCCTaGGCCATCTTGACTAGGATC +
Preference number: 5 (lower is better)
Translates to: RRQALAPASPSATRWEGRNKRPS*AILTRI
Trigger: GATCCTAGTCAAGATGGCCAAGGAGGGCCTCTTATT...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGATCTTAACCACGGCATaGTTGTGCGTCTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ALAPASPSATRWEGRGSPILTTA*LCVCFL
Trigger: GAGGAAGCAGACGCACAACAATGCCGTGGTTAAGAT...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGCTTTGTTAAGCAGTTaGACCACATCTGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RRQALAPASPSATRWEGRALLSS*TTSAPS
Trigger: GGAAGGAGCAGATGTGGTCAAACTGCTTAACAAAGC...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGAAGTCGATTAAGATGTaGCGGACGATTTCACCCAGG +
Preference number: 5 (lower is better)
Translates to: ALAPASPSATRWEGRGSPKSIKM*RTISPR
Trigger: CCTGGGTGAAATCGTCCGCAACATCTTAATCGACTT...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCAAGTCGATTAAGATGTaGCGGACGATTTCACCCAGG +
Preference number: 5 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRKSIKM*RTISPR
Trigger: CCTGGGTGAAATCGTCCGCAACATCTTAATCGACTT...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGAGGACACGTTACATTTaGGTGACAGTTCCTTCACCG +
Preference number: 5 (lower is better)
Translates to: ALAPASPSATRWEGRGSPRTRYI*VTVPSP
Trigger: CGGTGAAGGAACTGTCACCAAAATGTAACGTGTCCT...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCACGATTTTGTGGCATaGACACACCACGATGCGATG +
Preference number: 5 (lower is better)
Translates to: QALAPASPSATRWEGRGSHDFVA*THHDAM
Trigger: CATCGCATCGTGGTGTGTCAATGCCACAAAATCGTG...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGAGCCTGGGTGTGCCCTaGTTATCACGCAGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: LAGRVGGRRLKREVLERQSLGVP*LSRRRF
Trigger: GAACCGCCTGCGTGATAACAAGGGCACACCCAGGCT...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGAGCCTGGGTGTGCCCTaGTTATCACGCAGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: TISWILLSSPRRQALAPASLGVP*LSRRRF
Trigger: GAACCGCCTGCGTGATAACAAGGGCACACCCAGGCT...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGCCCCAAGGATGGGCTTaGGAGGCCCAGAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREPQGWA*EAQKAC
Trigger: ACAGGCCTTCTGGGCCTCCAAAGCCCATCCTTGGGG...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTTGTGGGGAGGGCACTaGCTGACCTCGGGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: TISWILLSSPRRQALAPALWGGH*LTSGPF
Trigger: GAAAGGACCCGAGGTCAGCAAGTGCCCTCCCCACAA...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS GCA 90 bp TCAATAATGCCGGTAGAATCGAAGGCGAAGGCTTTCCTTGCGCCCTaGAGTCCAACTCGATGCTGGCCCGGAGAAGGCCGGGCGCCGGAG +
Preference number: 5 (lower is better)
Translates to: SIMPVESKAKAFLAP*SPTRCWPGEGRAPE
Trigger: CTCCGGCGCCCGGCCTTCTCCGGGCCAGCATCGAGTTGGACTGCAGGGCGCAAGGAAAGCCTTCGCCTTCGATTCTACCGGCATTATTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS CCA 90 bp GGGCCACAAGGACACAAATCCATGTGGGCACCCCGTGGCGGATTTTaGTCATCACGTGACTGCCGGTGCCACTGGCCGTGTGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: GPQGHKSMWAPRGGF*SSRDCRCHWPCVQC
Trigger: GCACTGCACACACGGCCAGTGGCACCGGCAGTCACGTGATGACCAAAATCCGCCACGGGGTGCCCACATGGATTTGTGTCCTTGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS-3UTR CAA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGTTTCTCATGATTCACTaGCACCCGCAGAATTCGAAA +
Preference number: 5 (lower is better)
Translates to: ALAPASPSATRWEGRGSPFLMIH*HPQNSK
Trigger: TTTCGAATTCTGCGGGTGCAAGTGAATCATGAGAAA...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGTAACTTCTTGTCCTaGATCTTCCTTTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: RRQALAPASPSATRWEGRGNFLS*IFLFSM
Trigger: CATGGAGAAAAGGAAGATCAAGGACAAGAAGTTACC...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGAGCCTGGGTGTGCCCTaGTTATCACGCAGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWSLGVP*LSRRRF
Trigger: GAACCGCCTGCGTGATAACAAGGGCACACCCAGGCT...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGCAAGAGGAATCCCTTCTaGGTGAAGTCGATTAAGATG +
Preference number: 5 (lower is better)
Translates to: PWRQRLPAQLAGRVGGRRKRNPF*VKSIKM
Trigger: CATCTTAATCGACTTCACCAAGAAGGGATTCCTCTT...GCGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGCGGACTCTTAGCTGCTaGCCTCTGTGCGTAACCGCA +
Preference number: 5 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGRTLSC*PLCVTA
Trigger: TGCGGTTACGCACAGAGGCAAGCAGCTAAGAGTCCG...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CGCCGGCAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGATTCCAGTGATGGCATaGTTTGTTGGTTGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: RRQALAPASPSATRWEGRIPVMA*FVGWFL
Trigger: AAGGAACCAACCAACAAACAATGCCATCACTGGAAT...CCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTGCCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGGTCCTTGTTGCATGGTaGCTGGTCTTGCCTATTAAA +
Preference number: 5 (lower is better)
Translates to: QALAPASPSATRWEGRGSVLVAW*LVLPIK
Trigger: TTTAATAGGCAAGACCAGCAACCATGCAACAAGGAC...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CAA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGAGCTGTTTTCCAGGGTaGAGGGATCCCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: LAGRVGGRRLKREVLERQSCFPG*RDPRSI
Trigger: GATAGACCGGGGATCCCTCAACCCTGGAAAACAGCT...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGCCCTCCTTGGCCATCTaGACTAGGATCAGTCGAACC +
Preference number: 5 (lower is better)
Translates to: TISWILLSSPRRQALAPAPSLAI*TRISRT
Trigger: GGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGGG...CGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGCCGGGCATTGTTTGTTGGTaGGTTCCTTTTATCCAAATG +
Preference number: 5 (lower is better)
Translates to: ALAPASPSATRWEGRGSPGIVCW*VPFIQM
Trigger: CATTTGGATAAAAGGAACCAACCAACAAACAATGCC...CGGCGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CAGGCCCTGGCGCCAGCGTCTCCCAGCGCAACTCGCTGGGAGGGTAGGGGGTCGATGGCCTCATCTATTTaGGATTGTTGGCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: QALAPASPSATRWEGRGSMASSI*DCWQGK
Trigger: TTTTCCTTGCCAACAATCCAAAATAGATGAGGCCAT...CGACCCCCTACCCTCCCAGCGAGTTGCGCTGGGAGACGCTGGCGCCAGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGAGCTGTTTTCCAGGGTaGAGGGATCCCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWSCFPG*RDPRSI
Trigger: GATAGACCGGGGATCCCTCAACCCTGGAAAACAGCT...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGGTGGCAGCCACCAAGTaGGCTGAGCGAAATGAGACA +
Preference number: 5 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWVAATK*AERNET
Trigger: TGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCAC...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGTGGCAGCCACCAAGTaGGCTGAGCGAAATGAGACA +
Preference number: 5 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREVAATK*AERNET
Trigger: TGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCAC...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAGGAGGGGTTAACCACGGCATTGTaGTGCGTCTGCTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: VALTHHDAMPGHSGCQEGLTTAL*CVCFLS
Trigger: GCTGAGGAAGCAGACGCACAACAATGCCGTGGTTAA...CCCCTCCTGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGACCCCGCACACTGTCTaGACGAGGATACTGTCATCG +
Preference number: 5 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWTPHTV*TRILSS
Trigger: CGATGACAGTATCCTCGTCAAGACAGTGTGCGGGGT...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCATTGTGGGGAGGGCACTaGCTGACCTCGGGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: YTISWILLSSPRRQALAPLWGGH*LTSGPF
Trigger: GAAAGGACCCGAGGTCAGCAAGTGCCCTCCCCACAA...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS GCA 90 bp CTGCCCAGAGTGAAGAGCCCTTCCTATGAGGGTAGCCAGACCGGCTaGACAGGGCGGGCGCTCTTGCTCAAACACTTTCCAGACACTTGT +
Preference number: 5 (lower is better)
Translates to: LPRVKSPSYEGSQTG*TGRALLLKHFPDTC
Trigger: ACAAGTGTCTGGAAAGTGTTTGAGCAAGAGCGCCCGCCCTGTGCAGCCGGTCTGGCTACCCTCATAGGAAGGGCTCTTCACTCTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CCA 90 bp CCAGCCAAACATCAGTGCCCGAAGAATCCCTCCCCACACTCCATTTaGGAGTTGGGGAGGACACCGCACAGCACCACTTCCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: PAKHQCPKNPSPHSI*ELGRTPHSTTSSCF
Trigger: GAAGCAGCTGGAAGTGGTGCTGTGCGGTGTCCTCCCCAACTCCCAAATGGAGTGTGGGGAGGGATTCTTCGGGCACTGATGTTTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS-3UTR CAA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGAAGCGCCTTAGAGTCTaGTGGAAACGCCGGGAATAC +
Preference number: 5 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWKRLRV*WKRREY
Trigger: GTATTCCCGGCGTTTCCACAAGACTCTAAGGCGCTT...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGATCTTAACCACGGCATaGTTGTGCGTCTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LAGRVGGRRLKREVLERQILTTA*LCVCFL
Trigger: GAGGAAGCAGACGCACAACAATGCCGTGGTTAAGAT...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTGAAGTTAACCCTCCATaGCCCAAGATGTTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQREVNPP*PKMFQG
Trigger: CCCCTGAAACATCTTGGGCAATGGAGGGTTAACTTC...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS TCA 90 bp ACACAAATCCATGTGGGCACCCCGTGGCGGATTTTGGTCATCACGTaGCTGCCGGTGCCACTGGCCGTGTGTGCAGTGCACATGCACTAT +
Preference number: 5 (lower is better)
Translates to: TQIHVGTPWRILVIT*LPVPLAVCAVHMHY
Trigger: ATAGTGCATGTGCACTGCACACACGGCCAGTGGCACCGGCAGTCACGTGATGACCAAAATCCGCCACGGGGTGCCCACATGGATTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS GCA 90 bp CCTCTTTACAGGGCAGGAACCTGGGATGCCACAGGTGGGCCATCTTaGCCAGTGTCAGGTTGTGGTAGAGTTTTGAGCCAGGACTCCAGC +
Preference number: 5 (lower is better)
Translates to: PLYRAGTWDATGGPS*PVSGCGRVLSQDSS
Trigger: GCTGGAGTCCTGGCTCAAAACTCTACCACAACCTGACACTGGGCAAGATGGCCCACCTGTGGCATCCCAGGTTCCTGCCCTGTAAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS GCA 90 bp CTGCCTCCACATCACCGCTGCTTTACTGCTCCAGCCAAACATCAGTaGCCGAAGAATCCCTCCCCACACTCCATTTGGGAGTTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: LPPHHRCFTAPAKHQ*PKNPSPHSIWELGR
Trigger: CCTCCCCAACTCCCAAATGGAGTGTGGGGAGGGATTCTTCGGGCACTGATGTTTGGCTGGAGCAGTAAAGCAGCGGTGATGTGGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS GCA 90 bp ATACTTGTCAATAATGCCGGTAGAATCGAAGGCGAAGGCTTTCCTTaGGCCCTGCAGTCCAACTCGATGCTGGCCCGGAGAAGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: ILVNNAGRIEGEGFP*ALQSNSMLARRRPG
Trigger: GCCCGGCCTTCTCCGGGCCAGCATCGAGTTGGACTGCAGGGCGCAAGGAAAGCCTTCGCCTTCGATTCTACCGGCATTATTGACAAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS GCA 90 bp AAATCCATGTGGGCACCCCGTGGCGGATTTTGGTCATCACGTGACTaGCGGTGCCACTGGCCGTGTGTGCAGTGCACATGCACTATGGTT +
Preference number: 5 (lower is better)
Translates to: KSMWAPRGGFWSSRD*RCHWPCVQCTCTMV
Trigger: AACCATAGTGCATGTGCACTGCACACACGGCCAGTGGCACCGGCAGTCACGTGATGACCAAAATCCGCCACGGGGTGCCCACATGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CCA 90 bp AACATCAGTGCCCGAAGAATCCCTCCCCACACTCCATTTGGGAGTTaGGGAGGACACCGCACAGCACCACTTCCAGCTGCTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: NISARRIPPHTPFGS*GGHRTAPLPAASTA
Trigger: TGCAGTGGAAGCAGCTGGAAGTGGTGCTGTGCGGTGTCCTCCCCAACTCCCAAATGGAGTGTGGGGAGGGATTCTTCGGGCACTGATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS-3UTR CAA 90 bp CGGTTCAAGATGGCGCCCAGTGTGGCAGCCACCAAGTTGGCTGAGCGAAATGAGCCCTCCTTGGCCATCTaGACTAGGATCAGTCGAACC +
Preference number: 5 (lower is better)
Translates to: RFKMAPSVAATKLAERNEPSLAI*TRISRT
Trigger: GGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGGG...CTCATTTCGCTCAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCTTGAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CAA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGAATAAGAGGCCCTCCTaGGCCATCTTGACTAGGATC +
Preference number: 5 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWNKRPS*AILTRI
Trigger: GATCCTAGTCAAGATGGCCAAGGAGGGCCTCTTATT...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGAGCCTGGGTGTGCCCTaGTTATCACGCAGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALSLGVP*LSRRRF
Trigger: GAACCGCCTGCGTGATAACAAGGGCACACCCAGGCT...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCAGTAGGCTGGGGATCCCGGACTCTTAGCTGCTTGCCTCTGTGCGTAACCGCAAAGCGCCTTAGAGTCTaGTGGAAACGCCGGGAATAC +
Preference number: 5 (lower is better)
Translates to: AVGWGSRTLSCLPLCVTAKRLRV*WKRREY
Trigger: GTATTCCCGGCGTTTCCACAAGACTCTAAGGCGCTT...TGCGGTTACGCACAGAGGCAAGCAGCTAAGAGTCCGGGATCCCCAGCCTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CAA 90 bp GGTGCGTCTTGTAAAGAGATCCGTCGACACCAACCGTGGTCCGCAGCCTGGGTGTTAACCACGGCATTGTaGTGCGTCTGCTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: GASCKEIRRHQPWSAAWVLTTAL*CVCFLS
Trigger: GCTGAGGAAGCAGACGCACAACAATGCCGTGGTTAA...CACCCAGGCTGCGGACCACGGTTGGTGTCGACGGATCTCTTTACAAGACGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CAA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGATCTTAACCACGGCATaGTTGTGCGTCTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: EEAANAMPTLAFRQCPREILTTA*LCVCFL
Trigger: GAGGAAGCAGACGCACAACAATGCCGTGGTTAAGAT...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAGCGTAGGACACGTTACATTTaGGTGACAGTTCCTTCACCG +
Preference number: 5 (lower is better)
Translates to: PLVGFCFPPRAGRPWRQRRTRYI*VTVPSP
Trigger: CGGTGAAGGAACTGTCACCAAAATGTAACGTGTCCT...ACGCTGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCACCCCAAGGATGGGCTTaGGAGGCCCAGAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPPQGWA*EAQKAC
Trigger: ACAGGCCTTCTGGGCCTCCAAAGCCCATCCTTGGGG...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCAGATCTGCCCCATaGTGGGGAGGGCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPGRSAP*WGGHLL
Trigger: CAGCAAGTGCCCTCCCCACAATGGGGCAGATCTGCC...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS GCA 90 bp TGTCCCCTTCTCTTAGGTGCTGCCTCCACATCACCGCTGCTTTACTaGTCCAGCCAAACATCAGTGCCCGAAGAATCCCTCCCCACACTC +
Preference number: 5 (lower is better)
Translates to: CPLLLGAASTSPLLY*SSQTSVPEESLPTL
Trigger: GAGTGTGGGGAGGGATTCTTCGGGCACTGATGTTTGGCTGGAGCAGTAAAGCAGCGGTGATGTGGAGGCAGCACCTAAGAGAAGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS CCA 90 bp CACAGGGCGGGCGCTCTTGCTCAAACACTTTCCAGACACTTGTCCTaGATTCTCCTTCTTGTGGACCAAGGGGGCCTTGAAGCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: HRAGALAQTLSRHLS*ILLLVDQGGLEALS
Trigger: GCTGAGAGCTTCAAGGCCCCCTTGGTCCACAAGAAGGAGAATCCAGGACAAGTGTCTGGAAAGTGTTTGAGCAAGAGCGCCCGCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CCA 90 bp TCTCAGCCACCAGAGTGTCACAAGCCAGGCATGGCAAAAAGCATCTaGTGCTTCTGGGCCACAAGGACACAAATCCATGTGGGCACCCCG +
Preference number: 5 (lower is better)
Translates to: SQPPECHKPGMAKSI*CFWATRTQIHVGTP
Trigger: CGGGGTGCCCACATGGATTTGTGTCCTTGTGGCCCAGAAGCACCAGATGCTTTTTGCCATGCCTGGCTTGTGACACTCTGGTGGCTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS-3UTR CAA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGCTTTGTTAAGCAGTTaGACCACATCTGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: EEAANAMPTLAFRQCPREALLSS*TTSAPS
Trigger: GGAAGGAGCAGATGTGGTCAAACTGCTTAACAAAGC...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGAAGTCGATTAAGATGTaGCGGACGATTTCACCCAGG +
Preference number: 5 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREKSIKM*RTISPR
Trigger: CCTGGGTGAAATCGTCCGCAACATCTTAATCGACTT...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAACCCCGCACACTGTCTaGACGAGGATACTGTCATCG +
Preference number: 5 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPTPHTV*TRILSS
Trigger: CGATGACAGTATCCTCGTCAAGACAGTGTGCGGGGT...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACCGGACTCTTAGCTGCTaGCCTCTGTGCGTAACCGCA +
Preference number: 5 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHRTLSC*PLCVTA
Trigger: TGCGGTTACGCACAGAGGCAAGCAGCTAAGAGTCCG...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS GCA 90 bp CCAATCTCCCAGGCCTCAGCACCTCGACAGGGCAAACTCAGGCTGTaGTCACAGTCCATCTGGATATACACCCAGACTCCTCTTTACAGG +
Preference number: 5 (lower is better)
Translates to: PISQASAPRQGKLRL*SQSIWIYTQTPLYR
Trigger: CCTGTAAAGAGGAGTCTGGGTGTATATCCAGATGGACTGTGAGCACAGCCTGAGTTTGCCCTGTCGAGGTGCTGAGGCCTGGGAGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS CCA 90 bp TCCATCTGGATATACACCCAGACTCCTCTTTACAGGGCAGGAACCTaGGATGCCACAGGTGGGCCATCTTGCCCAGTGTCAGGTTGTGGT +
Preference number: 5 (lower is better)
Translates to: SIWIYTQTPLYRAGT*DATGGPSCPVSGCG
Trigger: ACCACAACCTGACACTGGGCAAGATGGCCCACCTGTGGCATCCCAGGTTCCTGCCCTGTAAAGAGGAGTCTGGGTGTATATCCAGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS-3UTR CAA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAATCTTAACCACGGCATaGTTGTGCGTCTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: YTISWILLSSPRRQALAPILTTA*LCVCFL
Trigger: GAGGAAGCAGACGCACAACAATGCCGTGGTTAAGAT...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGG +
Preference number: 5 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALTISWI*LSSPRR
Trigger: CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCACCCCAAGGATGGGCTTaGGAGGCCCAGAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVAPQGWA*EAQKAC
Trigger: ACAGGCCTTCTGGGCCTCCAAAGCCCATCCTTGGGG...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCCAAGGATGGGCTTaGGAGGCCCAGAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRPQGWA*EAQKAC
Trigger: ACAGGCCTTCTGGGCCTCCAAAGCCCATCCTTGGGG...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCACACGATTTTGTGGCATaGACACACCACGATGCGATG +
Preference number: 5 (lower is better)
Translates to: YTISWILLSSPRRQALAPHDFVA*THHDAM
Trigger: CATCGCATCGTGGTGTGTCAATGCCACAAAATCGTG...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGATTCCAGTGATGGCATaGTTTGTTGGTTGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: LAGRVGGRRLKREVLERQIPVMA*FVGWFL
Trigger: AAGGAACCAACCAACAAACAATGCCATCACTGGAAT...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCATCCAACTGTGGATTCTaGGCACAAAGCAGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPSNCGF*AQSRCG
Trigger: CCCACACCTGCTTTGTGCCAAGAATCCACAGTTGGA...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CAA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGCAACATACACTGTCCTaGCAATCCAACTGTGGATTC +
Preference number: 5 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREQHTLS*QSNCGF
Trigger: GAATCCACAGTTGGATTGCAAGGACAGTGTATGTTG...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR CAA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCTTGTGGGGAGGGCACTaGCTGACCTCGGGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGLWGGH*LTSGPF
Trigger: GAAAGGACCCGAGGTCAGCAAGTGCCCTCCCCACAA...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTCGGGACGTTCCAGCCTaGTCGTCAGCCCCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: GGIRVRDIINSTRSILYPRDVPA*SSAPVH
Trigger: ATGCACTGGGGCTGACGACAAGGCTGGAACGTCCCG...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643399.2
CDS CCA 90 bp TCAGCACCTCGACAGGGCAAACTCAGGCTGTGCTCACAGTCCATCTaGATATACACCCAGACTCCTCTTTACAGGGCAGGAACCTGGGAT +
Preference number: 5 (lower is better)
Translates to: SAPRQGKLRLCSQSI*IYTQTPLYRAGTWD
Trigger: ATCCCAGGTTCCTGCCCTGTAAAGAGGAGTCTGGGTGTATATCCAGATGGACTGTGAGCACAGCCTGAGTTTGCCCTGTCGAGGTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS-3UTR CAA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGGGTAACTTCTTGTCCTaGATCTTCCTTTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREGNFLS*IFLFSM
Trigger: CATGGAGAAAAGGAAGATCAAGGACAAGAAGTTACC...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CGGTTCAAGATGGCGCCCAGTGTGGCAGCCACCAAGTTGGCTGAGCGAAATGAGGCTTTGTTAAGCAGTTaGACCACATCTGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RFKMAPSVAATKLAERNEALLSS*TTSAPS
Trigger: GGAAGGAGCAGATGTGGTCAAACTGCTTAACAAAGC...CTCATTTCGCTCAGCCAACTTGGTGGCTGCCACACTGGGCGCCATCTTGAACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CAA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGCGCTTTTTGATGGCTTaGTTAAGCAGTTTGACCACA +
Preference number: 5 (lower is better)
Translates to: KQLMLCPHSPSGSAPGRERFLMA*LSSLTT
Trigger: TGTGGTCAAACTGCTTAACAAAGCCATCAAAAAGCG...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGAGCCTGGGTGTGCCCTaGTTATCACGCAGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRSLGVP*LSRRRF
Trigger: GAACCGCCTGCGTGATAACAAGGGCACACCCAGGCT...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAATCTTAACCACGGCATaGTTGTGCGTCTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPILTTA*LCVCFL
Trigger: GAGGAAGCAGACGCACAACAATGCCGTGGTTAAGAT...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGAAGAGGAATCCCTTCTaGGTGAAGTCGATTAAGATG +
Preference number: 5 (lower is better)
Translates to: EEAANAMPTLAFRQCPREKRNPF*VKSIKM
Trigger: CATCTTAATCGACTTCACCAAGAAGGGATTCCTCTT...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp AAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGGGAGAAGAGGAATCCCTTCTaGGTGAAGTCGATTAAGATG +
Preference number: 5 (lower is better)
Translates to: KQLMLCPHSPSGSAPGREKRNPF*VKSIKM
Trigger: CATCTTAATCGACTTCACCAAGAAGGGATTCCTCTT...CTCCCTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CACTGCCGTGCACGATGTTCTCTGGGGTGTCATAAACCTCGGACTCCATGTGAAACCCCGCACACTGTCTaGACGAGGATACTGTCATCG +
Preference number: 5 (lower is better)
Translates to: HCRARCSLGCHKPRTPCETPHTV*TRILSS
Trigger: CGATGACAGTATCCTCGTCAAGACAGTGTGCGGGGT...TTCACATGGAGTCCGAGGTTTATGACACCCCAGAGAACATCGTGCACGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CAA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATCGGACTCTTAGCTGCTaGCCTCTGTGCGTAACCGCA +
Preference number: 5 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYRTLSC*PLCVTA
Trigger: TGCGGTTACGCACAGAGGCAAGCAGCTAAGAGTCCG...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGTAGGGGGTCGCCGCTaGAAGAGAGAAGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQVGGRR*KREVLE
Trigger: CTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTAC...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGG +
Preference number: 5 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPTISWI*LSSPRR
Trigger: CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGG +
Preference number: 5 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGTISWI*LSSPRR
Trigger: CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCCCCCAAGGATGGGCTTaGGAGGCCCAGAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGPQGWA*EAQKAC
Trigger: ACAGGCCTTCTGGGCCTCCAAAGCCCATCCTTGGGG...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTCGCTGGGAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGGGCATTGTTTGTTGGTaGGTTCCTTTTATCCAAATG +
Preference number: 5 (lower is better)
Translates to: LAGRVGGRRLKREVLERQGIVCW*VPFIQM
Trigger: CATTTGGATAAAAGGAACCAACCAACAAACAATGCC...CTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAGGCAGATCTGCCCCATaGTGGGGAGGGCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKGRSAP*WGGHLL
Trigger: CAGCAAGTGCCCTCCCCACAATGGGGCAGATCTGCC...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACCTCAACAGCTGGGTCTaGAACGCACTGTCCTTGCAA +
Preference number: 5 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHLNSWV*NALSLQ
Trigger: TTGCAAGGACAGTGCGTTCAAGACCCAGCTGTTGAG...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436817.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GAGGAAGCAGCTAATGCTATGCCCACACTCGCCTTCAGGCAGTGCCCCCGGGAGATGGCCTCATCTATTTaGGATTGTTGGCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: EEAANAMPTLAFRQCPREMASSI*DCWQGK
Trigger: TTTTCCTTGCCAACAATCCAAAATAGATGAGGCCAT...CTCCCGGGGGCACTGCCTGAAGGCGAGTGTGGGCATAGCATTAGCTGCTTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGAGCTGTTTTCCAGGGTaGAGGGATCCCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWSCFPG*RDPRSI
Trigger: GATAGACCGGGGATCCCTCAACCCTGGAAAACAGCT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATCCCTCCTTGGCCATCTaGACTAGGATCAGTCGAACC +
Preference number: 5 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYPSLAI*TRISRT
Trigger: GGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGGG...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCCCCTCCTTGGCCATCTaGACTAGGATCAGTCGAACC +
Preference number: 5 (lower is better)
Translates to: LQYIPLVGFCFPPRAGRPPSLAI*TRISRT
Trigger: GGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGGG...GGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGATCTTAACCACGGCATaGTTGTGCGTCTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: DCHTRLGLVPRTHDFVALILTTA*LCVCFL
Trigger: GAGGAAGCAGACGCACAACAATGCCGTGGTTAAGAT...CAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGACCCCGCACACTGTCTaGACGAGGATACTGTCATCG +
Preference number: 5 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWTPHTV*TRILSS
Trigger: CGATGACAGTATCCTCGTCAAGACAGTGTGCGGGGT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCAAGGACACGTTACATTTaGGTGACAGTTCCTTCACCG +
Preference number: 5 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPRTRYI*VTVPSP
Trigger: CGGTGAAGGAACTGTCACCAAAATGTAACGTGTCCT...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCGTAGGGGGTCGCCGCTaGAAGAGAGAAGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGVGGRR*KREVLE
Trigger: CTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTAC...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAGTAGGGGGTCGCCGCTaGAAGAGAGAAGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKVGGRR*KREVLE
Trigger: CTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTAC...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGG +
Preference number: 5 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGTISWI*LSSPRR
Trigger: CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGG +
Preference number: 5 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWTISWI*LSSPRR
Trigger: CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACCACGATTTTGTGGCATaGACACACCACGATGCGATG +
Preference number: 5 (lower is better)
Translates to: TRLGLVPRTHDFVALTHHHDFVA*THHDAM
Trigger: CATCGCATCGTGGTGTGTCAATGCCACAAAATCGTG...GTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GAGGGTAGGGGGTCGCCGCTTGAAGAGAGAAGTGCTGGAGAGGCAGTAGGCTGGGGCATTGTTTGTTGGTaGGTTCCTTTTATCCAAATG +
Preference number: 5 (lower is better)
Translates to: EGRGSPLEERSAGEAVGWGIVCW*VPFIQM
Trigger: CATTTGGATAAAAGGAACCAACCAACAAACAATGCC...CCAGCCTACTGCCTCTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCTTGTGGGGAGGGCACTaGCTGACCTCGGGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGLWGGH*LTSGPF
Trigger: GAAAGGACCCGAGGTCAGCAAGTGCCCTCCCCACAA...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CAA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAGGCGAAGGCTTTCCTaGCGCCCTGCAGTCCAACTC +
Preference number: 5 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYRRRLS*RPAVQL
Trigger: GAGTTGGACTGCAGGGCGCAAGGAAAGCCTTCGCCT...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS-3UTR CAA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGAGCTGTTTTCCAGGGTaGAGGGATCCCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQSCFPG*RDPRSI
Trigger: GATAGACCGGGGATCCCTCAACCCTGGAAAACAGCT...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGTGGCAGCCACCAAGTaGGCTGAGCGAAATGAGACA +
Preference number: 5 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQVAATK*AERNET
Trigger: TGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCAC...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGAAGCGCCTTAGAGTCTaGTGGAAACGCCGGGAATAC +
Preference number: 5 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWKRLRV*WKRREY
Trigger: GTATTCCCGGCGTTTCCACAAGACTCTAAGGCGCTT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAAGCGCCTTAGAGTCTaGTGGAAACGCCGGGAATAC +
Preference number: 5 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGKRLRV*WKRREY
Trigger: GTATTCCCGGCGTTTCCACAAGACTCTAAGGCGCTT...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCATCTTAACCACGGCATaGTTGTGCGTCTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGILTTA*LCVCFL
Trigger: GAGGAAGCAGACGCACAACAATGCCGTGGTTAAGAT...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACCCCGCACACTGTCTaGACGAGGATACTGTCATCG +
Preference number: 5 (lower is better)
Translates to: GGIRVRDIINSTRSILYPTPHTV*TRILSS
Trigger: CGATGACAGTATCCTCGTCAAGACAGTGTGCGGGGT...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAAGGACACGTTACATTTaGGTGACAGTTCCTTCACCG +
Preference number: 5 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVARTRYI*VTVPSP
Trigger: CGGTGAAGGAACTGTCACCAAAATGTAACGTGTCCT...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGCGGACTCTTAGCTGCTaGCCTCTGTGCGTAACCGCA +
Preference number: 5 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVRTLSC*PLCVTA
Trigger: TGCGGTTACGCACAGAGGCAAGCAGCTAAGAGTCCG...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCTGGCGCCAATTCCAGTGATGGCATaGTTTGTTGGTTGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: YTISWILLSSPRRQALAPIPVMA*FVGWFL
Trigger: AAGGAACCAACCAACAAACAATGCCATCACTGGAAT...TGGCGCCAGGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCGAAGTTAACCCTCCATaGCCCAAGATGTTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGEVNPP*PKMFQG
Trigger: CCCCTGAAACATCTTGGGCAATGGAGGGTTAACTTC...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CAA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCACTTGAACGCCTTTGCTaGTTCTTCATTTGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVALERLC*FFIWAH
Trigger: GTGAGCCCAAATGAAGAACAAGCAAAGGCGTTCAAG...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR CAA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTCATGCAGGGCTCTTTTaGCCATCTTTCCACGCCACC +
Preference number: 5 (lower is better)
Translates to: GGIRVRDIINSTRSILYPHAGLF*PSFHAT
Trigger: GGTGGCGTGGAAAGATGGCAAAAAGAGCCCTGCATG...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360289.6
CDS-3UTR CAA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCATTGAACGCACTGTCCTaGCAATCCAACTGTGGATTC +
Preference number: 5 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVALNALS*QSNCGF
Trigger: GAATCCACAGTTGGATTGCAAGGACAGTGCGTTCAA...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436817.6
ENST00000643399.2
CDS CCA 90 bp CTTTTCCAGAATCTTCTCAGCCACCAGAGTGTCACAAGCCAGGCATaGCAAAAAGCATCTGGTGCTTCTGGGCCACAAGGACACAAATCC +
Preference number: 5 (lower is better)
Translates to: LFQNLLSHQSVTSQA*QKASGASGPQGHKS
Trigger: GGATTTGTGTCCTTGTGGCCCAGAAGCACCAGATGCTTTTTGCCATGCCTGGCTTGTGACACTCTGGTGGCTGAGAAGATTCTGGAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS-3UTR CAA 90 bp CGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCCACAGTGGGTGCCACGCTTTTTGATGGCTTaGTTAAGCAGTTTGACCACA +
Preference number: 5 (lower is better)
Translates to: RFCGIDTPRCDARPQWVPRFLMA*LSSLTT
Trigger: TGTGGTCAAACTGCTTAACAAAGCCATCAAAAAGCG...TGGCACCCACTGTGGCCTGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGAGCTGTTTTCCAGGGTaGAGGGATCCCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVSCFPG*RDPRSI
Trigger: GATAGACCGGGGATCCCTCAACCCTGGAAAACAGCT...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGCCCTCCTTGGCCATCTaGACTAGGATCAGTCGAACC +
Preference number: 5 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVPSLAI*TRISRT
Trigger: GGTTCGACTGATCCTAGTCAAGATGGCCAAGGAGGG...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAATAAGAGGCCCTCCTaGGCCATCTTGACTAGGATC +
Preference number: 5 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGNKRPS*AILTRI
Trigger: GATCCTAGTCAAGATGGCCAAGGAGGGCCTCTTATT...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCGTGGCAGCCACCAAGTaGGCTGAGCGAAATGAGACA +
Preference number: 5 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGVAATK*AERNET
Trigger: TGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCAC...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCATTAACCACGGCATTGTaGTGCGTCTGCTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVALTTAL*CVCFLS
Trigger: GCTGAGGAAGCAGACGCACAACAATGCCGTGGTTAA...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGACCCCGCACACTGTCTaGACGAGGATACTGTCATCG +
Preference number: 5 (lower is better)
Translates to: LYPTIYTISWILLSSPRRTPHTV*TRILSS
Trigger: CGATGACAGTATCCTCGTCAAGACAGTGTGCGGGGT...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAAGGACACGTTACATTTaGGTGACAGTTCCTTCACCG +
Preference number: 5 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPRTRYI*VTVPSP
Trigger: CGGTGAAGGAACTGTCACCAAAATGTAACGTGTCCT...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCGTAGGGGGTCGCCGCTaGAAGAGAGAAGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVVGGRR*KREVLE
Trigger: CTCCAGCACTTCTCTCTTCAAGCGGCGACCCCCTAC...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTCCAACTGTGGATTCTaGGCACAAAGCAGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: TTRLTKRWEIPVMALFVGSNCGF*AQSRCG
Trigger: CCCACACCTGCTTTGTGCCAAGAATCCACAGTTGGA...ACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTCTCAACAGCTGGGTCTaGAACGCACTGTCCTTGCAA +
Preference number: 5 (lower is better)
Translates to: TTRLTKRWEIPVMALFVGLNSWV*NALSLQ
Trigger: TTGCAAGGACAGTGCGTTCAAGACCCAGCTGTTGAG...ACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436817.6
ENST00000643399.2
CDS CCA 90 bp TCTCAACAGCTGGGTCTTGAACGCACTGTCCTTGCAATCCAACTGTaGATTCTTGGCACAAAGCAGGTGTGGGTAGGTGTTTGGACTCTT +
Preference number: 5 (lower is better)
Translates to: SQQLGLERTVLAIQL*ILGTKQVWVGVWTL
Trigger: AAGAGTCCAAACACCTACCCACACCTGCTTTGTGCCAAGAATCCACAGTTGGATTGCAAGGACAGTGCGTTCAAGACCCAGCTGTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000436817.6
ENST00000464803.6
ENST00000476368.6
ENST00000479594.5
ENST00000480047.5
ENST00000483054.5
ENST00000483077.5
ENST00000488644.5
ENST00000643399.2
CDS-3UTR CAA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGAAGCGCCTTAGAGTCTaGTGGAAACGCCGGGAATAC +
Preference number: 5 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVKRLRV*WKRREY
Trigger: GTATTCCCGGCGTTTCCACAAGACTCTAAGGCGCTT...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAAGCGCCTTAGAGTCTaGTGGAAACGCCGGGAATAC +
Preference number: 5 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGKRLRV*WKRREY
Trigger: GTATTCCCGGCGTTTCCACAAGACTCTAAGGCGCTT...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCTTAACCACGGCATTGTaGTGCGTCTGCTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGLTTAL*CVCFLS
Trigger: GCTGAGGAAGCAGACGCACAACAATGCCGTGGTTAA...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACGGACTCTTAGCTGCTaGCCTCTGTGCGTAACCGCA +
Preference number: 5 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKRTLSC*PLCVTA
Trigger: TGCGGTTACGCACAGAGGCAAGCAGCTAAGAGTCCG...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGCACGATTTTGTGGCATaGACACACCACGATGCGATG +
Preference number: 5 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQHDFVA*THHDAM
Trigger: CATCGCATCGTGGTGTGTCAATGCCACAAAATCGTG...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAATTCCAGTGATGGCATaGTTTGTTGGTTGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAIPVMA*FVGWFL
Trigger: AAGGAACCAACCAACAAACAATGCCATCACTGGAAT...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCGTCCTTGTTGCATGGTaGCTGGTCTTGCCTATTAAA +
Preference number: 5 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGVLVAW*LVLPIK
Trigger: TTTAATAGGCAAGACCAGCAACCATGCAACAAGGAC...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CAA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAATCCAACTGTGGATTCTaGGCACAAAGCAGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKSNCGF*AQSRCG
Trigger: CCCACACCTGCTTTGTGCCAAGAATCCACAGTTGGA...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCACTCAACAGCTGGGTCTaGAACGCCTTTGCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVALNSWV*NAFACS
Trigger: AGAACAAGCAAAGGCGTTCAAGACCCAGCTGTTGAG...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR CAA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTTGAACGCACTGTCCTaGCAATCCAACTGTGGATTC +
Preference number: 5 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYLNALS*QSNCGF
Trigger: GAATCCACAGTTGGATTGCAAGGACAGTGCGTTCAA...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436817.6
ENST00000643399.2
CDS TCA 90 bp TTCCCTGACCTTGTTGCATGGTTGCTGGTCTTGCCTATTAAACTTTaGGAAGTTAACCCTCCATTGCCCAAGATGTTTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: FPDLVAWLLVLPIKL*EVNPPLPKMFQGLA
Trigger: GGCCAGCCCCTGAAACATCTTGGGCAATGGAGGGTTAACTTCTCAAAGTTTAATAGGCAAGACCAGCAACCATGCAACAAGGTCAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479594.5
CDS GCA 90 bp GAGATACTTGTCAATATCTCCATAATCCTGTCCCCTTCTCTTAGGTaGTGCCTCCACATCACCGCTGCTTTACTGCTCCAGCCAAACATC +
Preference number: 5 (lower is better)
Translates to: EILVNISIILSPSLR*CLHITAALLLQPNI
Trigger: GATGTTTGGCTGGAGCAGTAAAGCAGCGGTGATGTGGAGGCAGCACCTAAGAGAAGGGGACAGGATTATGGAGATATTGACAAGTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS CCA 90 bp ACCTCTCTCCTTTTTATCGCATCCCTTAGTAAGGTGACTACATCGTaGCCCACGCAGTCTGTTGCCTTAAAACCCTTTGTCCACGTGATC +
Preference number: 5 (lower is better)
Translates to: TSLLFIASLSKVTTS*PTQSVALKPFVHVI
Trigger: GATCACGTGGACAAAGGGTTTTAAGGCAACAGACTGCGTGGGCCACGATGTAGTCACCTTACTAAGGGATGCGATAAAAAGGAGAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS-3UTR CAA 90 bp CAAGACTGTCACACGCGGCTAGGACTGGTTCCACGGACACACGATTTTGTGGCAATGGCCTCATCTATTTaGGATTGTTGGCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: QDCHTRLGLVPRTHDFVAMASSI*DCWQGK
Trigger: TTTTCCTTGCCAACAATCCAAAATAGATGAGGCCAT...TGCCACAAAATCGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGGCTTTGTTAAGCAGTTaGACCACATCTGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLALLSS*TTSAPS
Trigger: GGAAGGAGCAGATGTGGTCAAACTGCTTAACAAAGC...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCCGCTTTTTGATGGCTTaGTTAAGCAGTTTGACCACA +
Preference number: 5 (lower is better)
Translates to: TLHTWGTRSKSNHAKWQGRFLMA*LSSLTT
Trigger: TGTGGTCAAACTGCTTAACAAAGCCATCAAAAAGCG...GCCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAATAAGAGGCCCTCCTaGGCCATCTTGACTAGGATC +
Preference number: 5 (lower is better)
Translates to: AYIRNGCHYTSHVGDQVKNKRPS*AILTRI
Trigger: GATCCTAGTCAAGATGGCCAAGGAGGGCCTCTTATT...TTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAATAAGAGGCCCTCCTaGGCCATCTTGACTAGGATC +
Preference number: 5 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGNKRPS*AILTRI
Trigger: GATCCTAGTCAAGATGGCCAAGGAGGGCCTCTTATT...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAGTGGCAGCCACCAAGTaGGCTGAGCGAAATGAGACA +
Preference number: 5 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKVAATK*AERNET
Trigger: TGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCAC...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGAAGTCGATTAAGATGTaGCGGACGATTTCACCCAGG +
Preference number: 5 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRKSIKM*RTISPR
Trigger: CCTGGGTGAAATCGTCCGCAACATCTTAATCGACTT...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAAGGACACGTTACATTTaGGTGACAGTTCCTTCACCG +
Preference number: 5 (lower is better)
Translates to: HYTSHVGDQVKIKPCKVARTRYI*VTVPSP
Trigger: CGGTGAAGGAACTGTCACCAAAATGTAACGTGTCCT...TGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGCGGACTCTTAGCTGCTaGCCTCTGTGCGTAACCGCA +
Preference number: 5 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVRTLSC*PLCVTA
Trigger: TGCGGTTACGCACAGAGGCAAGCAGCTAAGAGTCCG...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCCACGATTTTGTGGCATaGACACACCACGATGCGATG +
Preference number: 5 (lower is better)
Translates to: CTLQYIPLVGFCFPPRAGHDFVA*THHDAM
Trigger: CATCGCATCGTGGTGTGTCAATGCCACAAAATCGTG...GCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGGAAGTTAACCCTCCATaGCCCAAGATGTTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVEVNPP*PKMFQG
Trigger: CCCCTGAAACATCTTGGGCAATGGAGGGTTAACTTC...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CAA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCCAACTGTGGATTCTaGGCACAAAGCAGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKSNCGF*AQSRCG
Trigger: CCCACACCTGCTTTGTGCCAAGAATCCACAGTTGGA...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS TCA 90 bp GTTGAAGTCCTTGTTGCATGGTTGCTGGTCTTGCCTATTAAACTTTaGGAAGTTAACCCTCCATTGCCCAAGATGTTTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: VEVLVAWLLVLPIKL*EVNPPLPKMFQGLA
Trigger: GGCCAGCCCCTGAAACATCTTGGGCAATGGAGGGTTAACTTCTCAAAGTTTAATAGGCAAGACCAGCAACCATGCAACAAGGACTTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000450646.6
ENST00000480047.5
ENST00000483077.5
CDS GCA 90 bp GGTTGCTGGTCTTGCCTATTAAACTTTGAGAAGTTAACCCTCCATTaGCCAAGATGTTTCAGGGGCTGGCCTGTCCAAACACAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: GCWSCLLNFEKLTLH*PRCFRGWPVQTQQD
Trigger: ATCTTGCTGTGTTTGGACAGGCCAGCCCCTGAAACATCTTGGGCAATGGAGGGTTAACTTCTCAAAGTTTAATAGGCAAGACCAGCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000450646.6
ENST00000464803.6
ENST00000479594.5
ENST00000480047.5
ENST00000483077.5
CDS GCA 90 bp ATACTTGTCAATATCTCCATAATCCTGTCCCCTTCTCTTAGGTGCTaGCTCCACATCACCGCTGCTTTACTGCTCCAGCCAAACATCAGT +
Preference number: 5 (lower is better)
Translates to: ILVNISIILSPSLRC*LHITAALLLQPNIS
Trigger: ACTGATGTTTGGCTGGAGCAGTAAAGCAGCGGTGATGTGGAGGCAGCACCTAAGAGAAGGGGACAGGATTATGGAGATATTGACAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS GCA 90 bp CCTCACCACCTTCGCATGAAGCAACCCATCTCAGATCCACTCTGTTaGCACTTTAAAGAGATAGTAAGCTGTGTGCTCACTTTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: PHHLRMKQPISDPLC*HFKEIVSCVLTFSK
Trigger: CTTGCTGAAAGTGAGCACACAGCTTACTATCTCTTTAAAGTGGCAACAGAGTGGATCTGAGATGGGTTGCTTCATGCGAAGGTGGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488644.5
CDS-3UTR CAA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCTTTCTCATGATTCACTaGCACCCGCAGAATTCGAAA +
Preference number: 5 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGFLMIH*HPQNSK
Trigger: TTTCGAATTCTGCGGGTGCAAGTGAATCATGAGAAA...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GGGCAAGTGAGGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATGGTAACTTCTTGTCCTaGATCTTCCTTTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: GQVRRDPGERYYQQHTLYGNFLS*IFLFSM
Trigger: CATGGAGAAAAGGAAGATCAAGGACAAGAAGTTACC...ATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCCTCACTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGCGCTTTTTGATGGCTTaGTTAAGCAGTTTGACCACA +
Preference number: 5 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGRFLMA*LSSLTT
Trigger: TGTGGTCAAACTGCTTAACAAAGCCATCAAAAAGCG...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CATACATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAAAATAAGAGGCCCTCCTaGGCCATCTTGACTAGGATC +
Preference number: 5 (lower is better)
Translates to: HTLEMDATTLHTWGTRSKNKRPS*AILTRI
Trigger: GATCCTAGTCAAGATGGCCAAGGAGGGCCTCTTATT...TTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCTTAACCACGGCATTGTaGTGCGTCTGCTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVLTTAL*CVCFLS
Trigger: GCTGAGGAAGCAGACGCACAACAATGCCGTGGTTAA...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAAGTCGATTAAGATGTaGCGGACGATTTCACCCAGG +
Preference number: 5 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYKSIKM*RTISPR
Trigger: CCTGGGTGAAATCGTCCGCAACATCTTAATCGACTT...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAAGAGGAATCCCTTCTaGGTGAAGTCGATTAAGATG +
Preference number: 5 (lower is better)
Translates to: PLHFTRGGPGQNQTMQSGKRNPF*VKSIKM
Trigger: CATCTTAATCGACTTCACCAAGAAGGGATTCCTCTT...GCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGAAGAGGAATCCCTTCTaGGTGAAGTCGATTAAGATG +
Preference number: 5 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWKRNPF*VKSIKM
Trigger: CATCTTAATCGACTTCACCAAGAAGGGATTCCTCTT...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGACCATTAGTTGGATTTaGCTTTCCTCCCCGCGCCGG +
Preference number: 5 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVTISWI*LSSPRR
Trigger: CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGT...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTGGTTCCACGGACACACGATTTTGTGGCATTGACACACCACGATGCGATGCCAGGCATTGTTTGTTGGTaGGTTCCTTTTATCCAAATG +
Preference number: 5 (lower is better)
Translates to: LVPRTHDFVALTHHDAMPGIVCW*VPFIQM
Trigger: CATTTGGATAAAAGGAACCAACCAACAAACAATGCC...TGGCATCGCATCGTGGTGTGTCAATGCCACAAAATCGTGTGTCCGTGGAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGATTCCAGTGATGGCATaGTTTGTTGGTTGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: YTSHVGDQVKIKPCKVAGIPVMA*FVGWFL
Trigger: AAGGAACCAACCAACAAACAATGCCATCACTGGAAT...CCCTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGTCCTTGTTGCATGGTaGCTGGTCTTGCCTATTAAA +
Preference number: 5 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQVLVAW*LVLPIK
Trigger: TTTAATAGGCAAGACCAGCAACCATGCAACAAGGAC...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
CDS-3UTR CAA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGCAACATACACTGTCCTaGCAATCCAACTGTGGATTC +
Preference number: 5 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQQHTLS*QSNCGF
Trigger: GAATCCACAGTTGGATTGCAAGGACAGTGTATGTTG...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR CAA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCTTGAACGCCTTTGCTaGTTCTTCATTTGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: LYPTIYTISWILLSSPRRLERLC*FFIWAH
Trigger: GTGAGCCCAAATGAAGAACAAGCAAAGGCGTTCAAG...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR CAA 90 bp CTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCAGTCCACACAGTCCATaGAATTCAAGCCTTTTCACA +
Preference number: 5 (lower is better)
Translates to: LQYIPLVGFCFPPRAGRPSPHSP*NSSLFT
Trigger: TGTGAAAAGGCTTGAATTCAATGGACTGTGTGGACT...GGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643399.2
CDS TCA 90 bp GAGTATCTTCTTGTTGCATGGTTGCTGGTCTTGCCTATTAAACTTTaGGAAGTTAACCCTCCATTGCCCAAGATGTTTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: EYLLVAWLLVLPIKL*EVNPPLPKMFQGLA
Trigger: GGCCAGCCCCTGAAACATCTTGGGCAATGGAGGGTTAACTTCTCAAAGTTTAATAGGCAAGACCAGCAACCATGCAACAAGAAGATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464803.6
ENST00000476368.6
CDS GCA 90 bp TTGGGCTCACTCTCATTTTTCCAAAAGGACAACATACACTGTCCTTaGAATCCAACTGTGGATTCTTGGCACAAAGCAGGTGTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: LGSLSFFQKDNIHCP*NPTVDSWHKAGVGR
Trigger: CCTACCCACACCTGCTTTGTGCCAAGAATCCACAGTTGGATTGCAAGGACAGTGTATGTTGTCCTTTTGGAAAAATGAGAGTGAGCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000421088.5
ENST00000448642.6
ENST00000450646.6
CDS GCA 90 bp GCAGGTGTGGGTAGGTGTTTGGACTCTTTTCCTTCTCAGGAACAATaGTCTGGGGAACAGTTCTTTAGTTGGTTAGTTGAAGTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: AGVGRCLDSFPSQEQ*SGEQFFSWLVEVRA
Trigger: TGCTCTGACTTCAACTAACCAACTAAAGAACTGTTCCCCAGAGCATTGTTCCTGAGAAGGAAAAGAGTCCAAACACCTACCCACACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464803.6
ENST00000476368.6
CDS GCA 90 bp GCAGGTGTGGGTAGGTGTTTGGACTCTTTTCCTTCTCAGGAACAATaGTCTGGGGAACAGTTCTTTAGTTGGTTAGTTGAAGTCCACACA +
Preference number: 5 (lower is better)
Translates to: AGVGRCLDSFPSQEQ*SGEQFFSWLVEVHT
Trigger: TGTGTGGACTTCAACTAACCAACTAAAGAACTGTTCCCCAGAGCATTGTTCCTGAGAAGGAAAAGAGTCCAAACACCTACCCACACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000479594.5
ENST00000483054.5
ENST00000488644.5
ENST00000643399.2
CDS-3UTR CAA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGTTTCTCATGATTCACTaGCACCCGCAGAATTCGAAA +
Preference number: 5 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLFLMIH*HPQNSK
Trigger: TTTCGAATTCTGCGGGTGCAAGTGAATCATGAGAAA...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGCAGGGTAACTTCTTGTCCTaGATCTTCCTTTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: TTLHTWGTRSKSNHAKWQGNFLS*IFLFSM
Trigger: CATGGAGAAAAGGAAGATCAAGGACAAGAAGTTACC...CTGCCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCCCATGGCCTCATCTATTTaGGATTGTTGGCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LQYIPLVGFCFPPRAGRPMASSI*DCWQGK
Trigger: TTTTCCTTGCCAACAATCCAAAATAGATGAGGCCAT...GGGCCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGCGCTTTTTGATGGCTTaGTTAAGCAGTTTGACCACA +
Preference number: 5 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRRFLMA*LSSLTT
Trigger: TGTGGTCAAACTGCTTAACAAAGCCATCAAAAAGCG...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GACACGGCTCACAAAGCGGTGGGAAATTCCAGTGATGGCATTGTTTGTTGGTTGAAGAGGAATCCCTTCTaGGTGAAGTCGATTAAGATG +
Preference number: 5 (lower is better)
Translates to: DTAHKAVGNSSDGIVCWLKRNPF*VKSIKM
Trigger: CATCTTAATCGACTTCACCAAGAAGGGATTCCTCTT...CAACCAACAAACAATGCCATCACTGGAATTTCCCACCGCTTTGTGAGCCGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGCAGGTACTTGTCAATCTTTTaGACCTGGTCATCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TLQYIPLVGFCFPPRAGRYLSIF*TWSSFS
Trigger: GCTGAAGGATGACCAGGTCAAAAAGATTGACAAGTA...CCTGCCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359426.7
CDS-3UTR CAA 90 bp GCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACCATGCAAAGTGGGGCATTGTTTGTTGGTaGGTTCCTTTTATCCAAATG +
Preference number: 5 (lower is better)
Translates to: ATTLHTWGTRSKSNHAKWGIVCW*VPFIQM
Trigger: CATTTGGATAAAAGGAACCAACCAACAAACAATGCC...CCACTTTGCATGGTTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GGAGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTATTCCAGTGATGGCATaGTTTGTTGGTTGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: GGIRVRDIINSTRSILYPIPVMA*FVGWFL
Trigger: AAGGAACCAACCAACAAACAATGCCATCACTGGAAT...AGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS GCA 90 bp GCAGGTGTGGGTAGGTGTTTGGACTCTTTTCCTTCTCAGGAACAATaGTCTGGGGAACAGTTCTTTAGTTGGTTAGTTGAAGTCCTTGTT +
Preference number: 5 (lower is better)
Translates to: AGVGRCLDSFPSQEQ*SGEQFFSWLVEVLV
Trigger: AACAAGGACTTCAACTAACCAACTAAAGAACTGTTCCCCAGAGCATTGTTCCTGAGAAGGAAAAGAGTCCAAACACCTACCCACACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000450646.6
ENST00000480047.5
ENST00000483077.5
CDS CCA 90 bp CAAAAGGACAACATACACTGTCCTTGCAATCCAACTGTGGATTCTTaGCACAAAGCAGGTGTGGGTAGGTGTTTGGACTCTTTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: QKDNIHCPCNPTVDS*HKAGVGRCLDSFPS
Trigger: AGAAGGAAAAGAGTCCAAACACCTACCCACACCTGCTTTGTGCCAAGAATCCACAGTTGGATTGCAAGGACAGTGTATGTTGTCCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000421088.5
ENST00000448642.6
ENST00000450646.6
CDS-3UTR CAA 90 bp AGGGATCCGGGTGAGAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACTTTCTCATGATTCACTaGCACCCGCAGAATTCGAAA +
Preference number: 5 (lower is better)
Translates to: RDPGERYYQQHTLYSVPYFLMIH*HPQNSK
Trigger: TTTCGAATTCTGCGGGTGCAAGTGAATCATGAGAAA...GTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTCTCACCCGGATCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTCCTCCCCGCGCCGGGGTAACTTCTTGTCCTaGATCTTCCTTTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: LYPTIYTISWILLSSPRRGNFLS*IFLFSM
Trigger: CATGGAGAAAAGGAAGATCAAGGACAAGAAGTTACC...CCGGCGCGGGGAGGAAAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAGCTTTGTTAAGCAGTTaGACCACATCTGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKALLSS*TTSAPS
Trigger: GGAAGGAGCAGATGTGGTCAAACTGCTTAACAAAGC...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp CAAAGTTTACTAGGTCATACGACACGGCTCACAAAGCGGTGGGAAATTCCAGTGAAGAGGAATCCCTTCTaGGTGAAGTCGATTAAGATG +
Preference number: 5 (lower is better)
Translates to: QSLLGHTTRLTKRWEIPVKRNPF*VKSIKM
Trigger: CATCTTAATCGACTTCACCAAGAAGGGATTCCTCTT...CACTGGAATTTCCCACCGCTTTGTGAGCCGTGTCGTATGACCTAGTAAACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000643399.2
CDS GCA 90 bp TACCACAGTAACTTCCCAGCTGATCTACAATTCAATTCTCTTTTGTaGAAAACTCCAGACGCCGTCCAACAGTTCGGATCCAAGCTTCAA +
Preference number: 5 (lower is better)
Translates to: YHSNFPADLQFNSLL*KTPDAVQQFGSKLQ
Trigger: TTGAAGCTTGGATCCGAACTGTTGGACGGCGTCTGGAGTTTTGCACAAAAGAGAATTGAATTGTAGATCAGCTGGGAAGTTACTGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479594.5
ENST00000483054.5
ENST00000643399.2
CDS CCA 90 bp CATTTTTCCAAAAGGACAACATACACTGTCCTTGCAATCCAACTGTaGATTCTTGGCACAAAGCAGGTGTGGGTAGGTGTTTGGACTCTT +
Preference number: 5 (lower is better)
Translates to: HFSKRTTYTVLAIQL*ILGTKQVWVGVWTL
Trigger: AAGAGTCCAAACACCTACCCACACCTGCTTTGTGCCAAGAATCCACAGTTGGATTGCAAGGACAGTGTATGTTGTCCTTTTGGAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000421088.5
ENST00000448642.6
ENST00000450646.6
CDS-3UTR CAA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTGTGGCAGCCACCAAGTaGGCTGAGCGAAATGAGACA +
Preference number: 5 (lower is better)
Translates to: STRSILYPTIYTISWILLVAATK*AERNET
Trigger: TGTCTCATTTCGCTCAGCCAACTTGGTGGCTGCCAC...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTTTAACCACGGCATTGTaGTGCGTCTGCTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: STRSILYPTIYTISWILLLTTAL*CVCFLS
Trigger: GCTGAGGAAGCAGACGCACAACAATGCCGTGGTTAA...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAACAATTCAATTCTCTTTaGTGCAAAACTCCAGACGCC +
Preference number: 5 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKQFNSL*CKTPDA
Trigger: GGCGTCTGGAGTTTTGCACAAAAGAGAATTGAATTG...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643399.2
CDS-3UTR CAA 90 bp CTCTGTTGGATGAATGCATACATTAGAAATGGATGCCACTACACTTCACACGTGGGTAACTTCTTGTCCTaGATCTTCCTTTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: LCWMNAYIRNGCHYTSHVGNFLS*IFLFSM
Trigger: CATGGAGAAAAGGAAGATCAAGGACAAGAAGTTACC...CACGTGTGAAGTGTAGTGGCATCCATTTCTAATGTATGCATTCATCCAACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAATGGCCTCATCTATTTaGGATTGTTGGCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKMASSI*DCWQGK
Trigger: TTTTCCTTGCCAACAATCCAAAATAGATGAGGCCAT...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp TTGGTTGGTTCCTTTTATCCAAATGGAGACAAGACACATTTCCGCAGGACTGTCATGGCCTCATCTATTTaGGATTGTTGGCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LVGSFYPNGDKTHFRRTVMASSI*DCWQGK
Trigger: TTTTCCTTGCCAACAATCCAAAATAGATGAGGCCAT...GACAGTCCTGCGGAAATGTGTCTTGTCTCCATTTGGATAAAAGGAACCAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAAAGCGCCTTAGAGTCTaGTGGAAACGCCGGGAATAC +
Preference number: 5 (lower is better)
Translates to: EILSTAHALFCTLQYIPLKRLRV*WKRREY
Trigger: GTATTCCCGGCGTTTCCACAAGACTCTAAGGCGCTT...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTATTAACCACGGCATTGTaGTGCGTCTGCTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: EILSTAHALFCTLQYIPLLTTAL*CVCFLS
Trigger: GCTGAGGAAGCAGACGCACAACAATGCCGTGGTTAA...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTCACGATTTTGTGGCATaGACACACCACGATGCGATG +
Preference number: 5 (lower is better)
Translates to: STRSILYPTIYTISWILLHDFVA*THHDAM
Trigger: CATCGCATCGTGGTGTGTCAATGCCACAAAATCGTG...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ATTAGAAATGGATGCCACTACACTTCACACGTGGGGGACCAGGTCAAAATCAAAGGCATTGTTTGTTGGTaGGTTCCTTTTATCCAAATG +
Preference number: 5 (lower is better)
Translates to: IRNGCHYTSHVGDQVKIKGIVCW*VPFIQM
Trigger: CATTTGGATAAAAGGAACCAACCAACAAACAATGCC...TTTGATTTTGACCTGGTCCCCCACGTGTGAAGTGTAGTGGCATCCATTTCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTCTCAACAGCTGGGTCTaGAACGCCTTTGCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: STRSILYPTIYTISWILLLNSWV*NAFACS
Trigger: AGAACAAGCAAAGGCGTTCAAGACCCAGCTGTTGAG...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360289.6
ENST00000448642.6
CDS-3UTR CAA 90 bp AGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGATTTTGCTTGCTTTGTTAAGCAGTTaGACCACATCTGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: STRSILYPTIYTISWILLALLSS*TTSAPS
Trigger: GGAAGGAGCAGATGTGGTCAAACTGCTTAACAAAGC...AAGCAAAATCCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp ATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGTTGGAAGTCGATTAAGATGTaGCGGACGATTTCACCCAGG +
Preference number: 5 (lower is better)
Translates to: IINSTRSILYPTIYTISWKSIKM*RTISPR
Trigger: CCTGGGTGAAATCGTCCGCAACATCTTAATCGACTT...CCAACTAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAGCTTTGTTAAGCAGTTaGACCACATCTGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: EILSTAHALFCTLQYIPLALLSS*TTSAPS
Trigger: GGAAGGAGCAGATGTGGTCAAACTGCTTAACAAAGC...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS-3UTR CAA 90 bp GAGATATTATCAACAGCACACGCTCTATTCTGTACCCTACAATATATACCATTAAGGACACGTTACATTTaGGTGACAGTTCCTTCACCG +
Preference number: 5 (lower is better)
Translates to: EILSTAHALFCTLQYIPLRTRYI*VTVPSP
Trigger: CGGTGAAGGAACTGTCACCAAAATGTAACGTGTCCT...TAATGGTATATATTGTAGGGTACAGAATAGAGCGTGTGCTGTTGATAATATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298649.8
ENST00000359426.7
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000493591.6
ENST00000643399.2
CDS TCA 90 bp TATTTCTTTTGGTCTTCAGTGCATAGAACAGGGCTTGGCATTCATTaGATCATCATTTATAGAGTATCTTCTTGTTGCATGGTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: YFFWSSVHRTGLGIH*IIIYRVSSCCMVAG
Trigger: ACCAGCAACCATGCAACAAGAAGATACTCTATAAATGATGATTCAATGAATGCCAAGCCCTGTTCTATGCACTGAAGACCAAAAGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464803.6
ENST00000476368.6
CDS GCA 72 bp CGCCGGAGGATGGAGGCAGCGGAGGCGGCGAGCGGATaGCGGAACGCAAGGCTGCGGCCAGGACCAGCGGCG +
Preference number: 6 (lower is better)
Translates to: RRRMEAAEAASG*RNARLRPGPAA
Trigger: CGCCGCTGGTCCTGGCCGCAGCCTTGCGTTCCGGCATCCGCTCGCCGCCTCCGCTGCCTCCATCCTCCGGCG
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS GCA 72 bp GCGAAGGCTTTCCTTGCGCCCTGCAGTCCAACTCGATaGTGGCCCGGAGAAGGCCGGGCGCCGGAGGATGGA +
Preference number: 6 (lower is better)
Translates to: AKAFLAPCSPTR*WPGEGRAPEDG
Trigger: TCCATCCTCCGGCGCCCGGCCTTCTCCGGGCCAGCATCGAGTTGGACTGCAGGGCGCAAGGAAAGCCTTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS TCA 72 bp CATGTGGGCACCCCGTGGCGGATTTTGGTCATCACGTaGCTGCCGGTGCCACTGGCCGTGTGTGCAGTGCAC +
Preference number: 6 (lower is better)
Translates to: HVGTPWRILVIT*LPVPLAVCAVH
Trigger: GTGCACTGCACACACGGCCAGTGGCACCGGCAGTCACGTGATGACCAAAATCCGCCACGGGGTGCCCACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS GCA 72 bp CCGGTAGAATCGAAGGCGAAGGCTTTCCTTGCGCCCTaGAGTCCAACTCGATGCTGGCCCGGAGAAGGCCGG +
Preference number: 6 (lower is better)
Translates to: PVESKAKAFLAP*SPTRCWPGEGR
Trigger: CCGGCCTTCTCCGGGCCAGCATCGAGTTGGACTGCAGGGCGCAAGGAAAGCCTTCGCCTTCGATTCTACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS GCA 72 bp TGGGCACCCCGTGGCGGATTTTGGTCATCACGTGACTaGCGGTGCCACTGGCCGTGTGTGCAGTGCACATGC +
Preference number: 6 (lower is better)
Translates to: WAPRGGFWSSRD*RCHWPCVQCTC
Trigger: GCATGTGCACTGCACACACGGCCAGTGGCACCGGCAGTCACGTGATGACCAAAATCCGCCACGGGGTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS GCA 72 bp CCCCGTGGCGGATTTTGGTCATCACGTGACTGCCGGTaGCACTGGCCGTGTGTGCAGTGCACATGCACTATG +
Preference number: 6 (lower is better)
Translates to: PRGGFWSSRDCR*HWPCVQCTCTM
Trigger: CATAGTGCATGTGCACTGCACACACGGCCAGTGGCACCGGCAGTCACGTGATGACCAAAATCCGCCACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CCA 72 bp GCCCGAAGAATCCCTCCCCACACTCCATTTGGGAGTTaGGGAGGACACCGCACAGCACCACTTCCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: ARRIPPHTPFGS*GGHRTAPLPAA
Trigger: AGCAGCTGGAAGTGGTGCTGTGCGGTGTCCTCCCCAACTCCCAAATGGAGTGTGGGGAGGGATTCTTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS CCA 72 bp GGACACAAATCCATGTGGGCACCCCGTGGCGGATTTTaGTCATCACGTGACTGCCGGTGCCACTGGCCGTGT +
Preference number: 6 (lower is better)
Translates to: GHKSMWAPRGGF*SSRDCRCHWPC
Trigger: ACACGGCCAGTGGCACCGGCAGTCACGTGATGACCAAAATCCGCCACGGGGTGCCCACATGGATTTGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CAA 72 bp GACCCTGTCTCGATTCTCGCTGGCAGATCTGCCCCATaGTGGGGAGGGCACTTGCTGACCTCGGGTCCTTTC +
Preference number: 6 (lower is better)
Translates to: DPVSILAGRSAP*WGGHLLTSGPF
Trigger: GAAAGGACCCGAGGTCAGCAAGTGCCCTCCCCACAATGGGGCAGATCTGCCAGCGAGAATCGAGACAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464803.6
CDS CAA 72 bp TGCCCGAAGAATCCCTCCCCACACTCCATTTGGGAGTaGGGGAGGACACCGCACAGCACCACTTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: CPKNPSPHSIWE*GRTPHSTTSSC
Trigger: GCAGCTGGAAGTGGTGCTGTGCGGTGTCCTCCCCAACTCCCAAATGGAGTGTGGGGAGGGATTCTTCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS GCA 72 bp CACCCAGACTCCTCTTTACAGGGCAGGAACCTGGGATaGCACAGGTGGGCCATCTTGCCCAGTGTCAGGTTG +
Preference number: 6 (lower is better)
Translates to: HPDSSLQGRNLG*HRWAILPSVRL
Trigger: CAACCTGACACTGGGCAAGATGGCCCACCTGTGGCATCCCAGGTTCCTGCCCTGTAAAGAGGAGTCTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS GCA 72 bp TTTTCAGCTGCTGTAGCCGATTCTCGCTGGCAGATCTaGCCCATTGTGGGGAGGGCACTTGCTGACCTCGGG +
Preference number: 6 (lower is better)
Translates to: FSAAVADSRWQI*PIVGRALADLG
Trigger: CCCGAGGTCAGCAAGTGCCCTCCCCACAATGGGGCAGATCTGCCAGCGAGAATCGGCTACAGCAGCTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360289.6
ENST00000421088.5
ENST00000436817.6
ENST00000448642.6
ENST00000450646.6
ENST00000476368.6
ENST00000479594.5
ENST00000480047.5
ENST00000483054.5
ENST00000483077.5
ENST00000488644.5
ENST00000643399.2
CDS GCA 72 bp ATAGCAAGACCCTGTCTCGATTCTCGCTGGCAGATCTaGCCCATTGTGGGGAGGGCACTTGCTGACCTCGGG +
Preference number: 6 (lower is better)
Translates to: IARPCLDSRWQI*PIVGRALADLG
Trigger: CCCGAGGTCAGCAAGTGCCCTCCCCACAATGGGGCAGATCTGCCAGCGAGAATCGAGACAGGGTCTTGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464803.6
CDS GCA 72 bp GTGAAGAGCCCTTCCTATGAGGGTAGCCAGACCGGCTaGACAGGGCGGGCGCTCTTGCTCAAACACTTTCCA +
Preference number: 6 (lower is better)
Translates to: VKSPSYEGSQTG*TGRALLLKHFP
Trigger: TGGAAAGTGTTTGAGCAAGAGCGCCCGCCCTGTGCAGCCGGTCTGGCTACCCTCATAGGAAGGGCTCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CCA 72 bp CATCAGTGCCCGAAGAATCCCTCCCCACACTCCATTTaGGAGTTGGGGAGGACACCGCACAGCACCACTTCC +
Preference number: 6 (lower is better)
Translates to: HQCPKNPSPHSI*ELGRTPHSTTS
Trigger: GGAAGTGGTGCTGTGCGGTGTCCTCCCCAACTCCCAAATGGAGTGTGGGGAGGGATTCTTCGGGCACTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS CCA 72 bp AATGCCAGCTATGTGCTCCCACAGGGTTCCAGTCGCTaGAGGCCGCAGGGCACCAGGACTACCACAGTAACT +
Preference number: 6 (lower is better)
Translates to: NASYVLPQGSSR*RPQGTRTTTVT
Trigger: AGTTACTGTGGTAGTCCTGGTGCCCTGCGGCCTCCAGCGACTGGAACCCTGTGGGAGCACATAGCTGGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000479594.5
ENST00000483054.5
ENST00000488644.5
ENST00000643399.2
CDS CAA 72 bp TGTCCTGGATTCTCCTTCTTGTGGACCAAGGGGGCCTaGAAGCTCTCAGCGGCTCCCAAAGTTGGACCCCCG +
Preference number: 6 (lower is better)
Translates to: CPGFSFLWTKGA*KLSAAPKVGPP
Trigger: CGGGGGTCCAACTTTGGGAGCCGCTGAGAGCTTCAAGGCCCCCTTGGTCCACAAGAAGGAGAATCCAGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CAA 72 bp GAGGGTAGCCAGACCGGCTGCACAGGGCGGGCGCTCTaGCTCAAACACTTTCCAGACACTTGTCCTGGATTC +
Preference number: 6 (lower is better)
Translates to: EGSQTGCTGRAL*LKHFPDTCPGF
Trigger: GAATCCAGGACAAGTGTCTGGAAAGTGTTTGAGCAAGAGCGCCCGCCCTGTGCAGCCGGTCTGGCTACCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CAA 90 bp GCCACAGGTGGGCCATCTTGCCCAGTGTCAGGTTGTGGTAGAGTTTaGAGCCAGGACTCCAGCCTAGTCCTGATGCCCAGCCAGTGCTCT +
Preference number: 6 (lower is better)
Translates to: ATGGPSCPVSGCGRV*SQDSSLVLMPSQCS
Trigger: AGAGCACTGGCTGGGCATCAGGACTAGGCTGGAGTCCTGGCTCAAAACTCTACCACAACCTGACACTGGGCAAGATGGCCCACCTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS CAA 90 bp AAACATCAGTGCCCGAAGAATCCCTCCCCACACTCCATTTGGGAGTaGGGGAGGACACCGCACAGCACCACTTCCAGCTGCTTCCACTGC +
Preference number: 6 (lower is better)
Translates to: KHQCPKNPSPHSIWE*GRTPHSTTSSCFHC
Trigger: GCAGTGGAAGCAGCTGGAAGTGGTGCTGTGCGGTGTCCTCCCCAACTCCCAAATGGAGTGTGGGGAGGGATTCTTCGGGCACTGATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS CAA 90 bp TCCAGCCAAACATCAGTGCCCGAAGAATCCCTCCCCACACTCCATTaGGGAGTTGGGGAGGACACCGCACAGCACCACTTCCAGCTGCTT +
Preference number: 6 (lower is better)
Translates to: SSQTSVPEESLPTLH*GVGEDTAQHHFQLL
Trigger: AAGCAGCTGGAAGTGGTGCTGTGCGGTGTCCTCCCCAACTCCCAAATGGAGTGTGGGGAGGGATTCTTCGGGCACTGATGTTTGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS CAA 90 bp CGGCTGCACAGGGCGGGCGCTCTTGCTCAAACACTTTCCAGACACTaGTCCTGGATTCTCCTTCTTGTGGACCAAGGGGGCCTTGAAGCT +
Preference number: 6 (lower is better)
Translates to: RLHRAGALAQTLSRH*SWILLLVDQGGLEA
Trigger: AGCTTCAAGGCCCCCTTGGTCCACAAGAAGGAGAATCCAGGACAAGTGTCTGGAAAGTGTTTGAGCAAGAGCGCCCGCCCTGTGCAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS GCA 72 bp AGGGCAGGAACCTGGGATGCCACAGGTGGGCCATCTTaGCCAGTGTCAGGTTGTGGTAGAGTTTTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: RAGTWDATGGPS*PVSGCGRVLSQ
Trigger: CTGGCTCAAAACTCTACCACAACCTGACACTGGGCAAGATGGCCCACCTGTGGCATCCCAGGTTCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS GCA 72 bp AGGACACCGCACAGCACCACTTCCAGCTGCTTCCACTaGAAGCCTCGGTCTGTGGACCATCTCACTTTCAGC +
Preference number: 6 (lower is better)
Translates to: RTPHSTTSSCFH*KPRSVDHLTFS
Trigger: GCTGAAAGTGAGATGGTCCACAGACCGAGGCTTGCAGTGGAAGCAGCTGGAAGTGGTGCTGTGCGGTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS GCA 72 bp AGGGTAGCCAGACCGGCTGCACAGGGCGGGCGCTCTTaGTCAAACACTTTCCAGACACTTGTCCTGGATTCT +
Preference number: 6 (lower is better)
Translates to: RVARPAAQGGRS*SNTFQTLVLDS
Trigger: AGAATCCAGGACAAGTGTCTGGAAAGTGTTTGAGCAAGAGCGCCCGCCCTGTGCAGCCGGTCTGGCTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CAA 72 bp GGGCCATCTTGCCCAGTGTCAGGTTGTGGTAGAGTTTaGAGCCAGGACTCCAGCCTAGTCCTGATGCCCAGC +
Preference number: 6 (lower is better)
Translates to: GPSCPVSGCGRV*SQDSSLVLMPS
Trigger: GCTGGGCATCAGGACTAGGCTGGAGTCCTGGCTCAAAACTCTACCACAACCTGACACTGGGCAAGATGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS CAA 72 bp ACATCAGTGCCCGAAGAATCCCTCCCCACACTCCATTaGGGAGTTGGGGAGGACACCGCACAGCACCACTTC +
Preference number: 6 (lower is better)
Translates to: TSVPEESLPTLH*GVGEDTAQHHF
Trigger: GAAGTGGTGCTGTGCGGTGTCCTCCCCAACTCCCAAATGGAGTGTGGGGAGGGATTCTTCGGGCACTGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS CAA 90 bp GTCCAACAGTTCGGATCCAAGCTTCAATCCCGGGACGTTCCAGCCTaGTCGTCAGCCCCAGTGCATTCCCTGACCTTGTTGCATGGTTGC +
Preference number: 6 (lower is better)
Translates to: VQQFGSKLQSRDVPA*SSAPVHSLTLLHGC
Trigger: GCAACCATGCAACAAGGTCAGGGAATGCACTGGGGCTGACGACAAGGCTGGAACGTCCCGGGATTGAAGCTTGGATCCGAACTGTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479594.5
CDS CAA 90 bp GTCCAACAGTTCGGATCCAAGCTTCAATCCCGGGACGTTCCAGCCTaGTCGTCAGCCCCAGTGCATTCCCTGACCTGGAAAGCAGACTCA +
Preference number: 6 (lower is better)
Translates to: VQQFGSKLQSRDVPA*SSAPVHSLTWKADS
Trigger: TGAGTCTGCTTTCCAGGTCAGGGAATGCACTGGGGCTGACGACAAGGCTGGAACGTCCCGGGATTGAAGCTTGGATCCGAACTGTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643399.2
CDS GCA 72 bp CAGGCCTCAGCACCTCGACAGGGCAAACTCAGGCTGTaGTCACAGTCCATCTGGATATACACCCAGACTCCT +
Preference number: 6 (lower is better)
Translates to: QASAPRQGKLRL*SQSIWIYTQTP
Trigger: AGGAGTCTGGGTGTATATCCAGATGGACTGTGAGCACAGCCTGAGTTTGCCCTGTCGAGGTGCTGAGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS GCA 72 bp AATAATGCCGGTAGAATCGAAGGCGAAGGCTTTCCTTaGGCCCTGCAGTCCAACTCGATGCTGGCCCGGAGA +
Preference number: 6 (lower is better)
Translates to: NNAGRIEGEGFP*ALQSNSMLARR
Trigger: TCTCCGGGCCAGCATCGAGTTGGACTGCAGGGCGCAAGGAAAGCCTTCGCCTTCGATTCTACCGGCATTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493591.6
CDS CCA 72 bp GGCGGATTTTGGTCATCACGTGACTGCCGGTGCCACTaGCCGTGTGTGCAGTGCACATGCACTATGGTTTTG +
Preference number: 6 (lower is better)
Translates to: GGFWSSRDCRCH*PCVQCTCTMVL
Trigger: CAAAACCATAGTGCATGTGCACTGCACACACGGCCAGTGGCACCGGCAGTCACGTGATGACCAAAATCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CCA 72 bp TCTGGTGCTTCTGGGCCACAAGGACACAAATCCATGTaGGCACCCCGTGGCGGATTTTGGTCATCACGTGAC +
Preference number: 6 (lower is better)
Translates to: SGASGPQGHKSM*APRGGFWSSRD
Trigger: GTCACGTGATGACCAAAATCCGCCACGGGGTGCCCACATGGATTTGTGTCCTTGTGGCCCAGAAGCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CAA 72 bp TTCGGATCCAAGCTTCAATCCCGGGACGTTCCAGCCTaGTCGTCAGCCCCAGTGCATTCCCTGACCTTGTTG +
Preference number: 6 (lower is better)
Translates to: FGSKLQSRDVPA*SSAPVHSLTLL
Trigger: CAACAAGGTCAGGGAATGCACTGGGGCTGACGACAAGGCTGGAACGTCCCGGGATTGAAGCTTGGATCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479594.5
CDS CAA 72 bp TTCGGATCCAAGCTTCAATCCCGGGACGTTCCAGCCTaGTCGTCAGCCCCAGTGCATTCCCTGACCTGGAAA +
Preference number: 6 (lower is better)
Translates to: FGSKLQSRDVPA*SSAPVHSLTWK
Trigger: TTTCCAGGTCAGGGAATGCACTGGGGCTGACGACAAGGCTGGAACGTCCCGGGATTGAAGCTTGGATCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643399.2
CDS GCA 72 bp CATCACCGCTGCTTTACTGCTCCAGCCAAACATCAGTaGCCGAAGAATCCCTCCCCACACTCCATTTGGGAG +
Preference number: 6 (lower is better)
Translates to: HHRCFTAPAKHQ*PKNPSPHSIWE
Trigger: CTCCCAAATGGAGTGTGGGGAGGGATTCTTCGGGCACTGATGTTTGGCTGGAGCAGTAAAGCAGCGGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS GCA 72 bp CTCTTAGGTGCTGCCTCCACATCACCGCTGCTTTACTaGTCCAGCCAAACATCAGTGCCCGAAGAATCCCTC +
Preference number: 6 (lower is better)
Translates to: LLGAASTSPLLY*SSQTSVPEESL
Trigger: GAGGGATTCTTCGGGCACTGATGTTTGGCTGGAGCAGTAAAGCAGCGGTGATGTGGAGGCAGCACCTAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS GCA 72 bp GGTCATCACGTGACTGCCGGTGCCACTGGCCGTGTGTaGAGTGCACATGCACTATGGTTTTGTAATCTCACC +
Preference number: 6 (lower is better)
Translates to: GHHVTAGATGRV*SAHALWFCNLT
Trigger: GGTGAGATTACAAAACCATAGTGCATGTGCACTGCACACACGGCCAGTGGCACCGGCAGTCACGTGATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CCA 72 bp ATATACACCCAGACTCCTCTTTACAGGGCAGGAACCTaGGATGCCACAGGTGGGCCATCTTGCCCAGTGTCA +
Preference number: 6 (lower is better)
Translates to: IYTQTPLYRAGT*DATGGPSCPVS
Trigger: TGACACTGGGCAAGATGGCCCACCTGTGGCATCCCAGGTTCCTGCCCTGTAAAGAGGAGTCTGGGTGTATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298649.8
CDS CCA 72 bp CCAGAGTGTCACAAGCCAGGCATGGCAAAAAGCATCTaGTGCTTCTGGGCCACAAGGACACAAATCCATGTG +
Preference number: 6 (lower is better)
Translates to: PECHKPGMAKSI*CFWATRTQIHV
Trigger: CACATGGATTTGTGTCCTTGTGGCCCAGAAGCACCAGATGCTTTTTGCCATGCCTGGCTTGTGACACTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS CCA 72 bp AATCTTCTCAGCCACCAGAGTGTCACAAGCCAGGCATaGCAAAAAGCATCTGGTGCTTCTGGGCCACAAGGA +
Preference number: 6 (lower is better)
Translates to: NLLSHQSVTSQA*QKASGASGPQG
Trigger: TCCTTGTGGCCCAGAAGCACCAGATGCTTTTTGCCATGCCTGGCTTGTGACACTCTGGTGGCTGAGAAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494253.1
CDS GCA 72 bp AATATCTCCATAATCCTGTCCCCTTCTCTTAGGTGCTaGCTCCACATCACCGCTGCTTTACTGCTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: NISIILSPSLRC*LHITAALLLQP
Trigger: TGGCTGGAGCAGTAAAGCAGCGGTGATGTGGAGGCAGCACCTAAGAGAAGGGGACAGGATTATGGAGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS GCA 72 bp GTCAATATCTCCATAATCCTGTCCCCTTCTCTTAGGTaGTGCCTCCACATCACCGCTGCTTTACTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: VNISIILSPSLR*CLHITAALLLQ
Trigger: CTGGAGCAGTAAAGCAGCGGTGATGTGGAGGCAGCACCTAAGAGAAGGGGACAGGATTATGGAGATATTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS CCA 72 bp CTGGGTCTTGAACGCACTGTCCTTGCAATCCAACTGTaGATTCTTGGCACAAAGCAGGTGTGGGTAGGTGTT +
Preference number: 6 (lower is better)
Translates to: LGLERTVLAIQL*ILGTKQVWVGV
Trigger: AACACCTACCCACACCTGCTTTGTGCCAAGAATCCACAGTTGGATTGCAAGGACAGTGCGTTCAAGACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000436817.6
ENST00000464803.6
ENST00000476368.6
ENST00000479594.5
ENST00000480047.5
ENST00000483054.5
ENST00000483077.5
ENST00000488644.5
ENST00000643399.2
CDS CCA 72 bp GCAATCCAACTGTGGATTCTTGGCACAAAGCAGGTGTaGGTAGGTGTTTGGACTCTTTTCCTTCTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: AIQLWILGTKQV*VGVWTLFLLRN
Trigger: GTTCCTGAGAAGGAAAAGAGTCCAAACACCTACCCACACCTGCTTTGTGCCAAGAATCCACAGTTGGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000360289.6
ENST00000421088.5
ENST00000436817.6
ENST00000448642.6
ENST00000450646.6
ENST00000464803.6
ENST00000476368.6
ENST00000479594.5
ENST00000480047.5
ENST00000483054.5
ENST00000483077.5
ENST00000488644.5
ENST00000643399.2
CDS CCA 72 bp TCGGGTCCTTTCTTCTGCTTTTCTACTCTCAACAGCTaGGTCTTGAACGCACTGTCCTTGCAATCCAACTGT +
Preference number: 6 (lower is better)
Translates to: SGPFFCFSTLNS*VLNALSLQSNC
Trigger: ACAGTTGGATTGCAAGGACAGTGCGTTCAAGACCCAGCTGTTGAGAGTAGAAAAGCAGAAGAAAGGACCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000436817.6
ENST00000464803.6
ENST00000476368.6
ENST00000479594.5
ENST00000480047.5
ENST00000483054.5
ENST00000483077.5
ENST00000488644.5
ENST00000643399.2
CDS CCA 72 bp GCCCCAGTGCATTCCCTGACCTTGTTGCATGGTTGCTaGTCTTGCCTATTAAACTTTGAGAAGTTAACCCTC +
Preference number: 6 (lower is better)
Translates to: APVHSLTLLHGC*SCLLNFEKLTL
Trigger: GAGGGTTAACTTCTCAAAGTTTAATAGGCAAGACCAGCAACCATGCAACAAGGTCAGGGAATGCACTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479594.5
CDS CAA 90 bp GACTACCACAGTAACTTCCCAGCTGATCTACAATTCAATTCTCTTTaGTGCAAAACTCCAGACGCCGTCCAACAGTTCGGATCCAAGCTT +
Preference number: 6 (lower is better)
Translates to: DYHSNFPADLQFNSL*CKTPDAVQQFGSKL
Trigger: AAGCTTGGATCCGAACTGTTGGACGGCGTCTGGAGTTTTGCACAAAAGAGAATTGAATTGTAGATCAGCTGGGAAGTTACTGTGGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479594.5
ENST00000483054.5
ENST00000643399.2
CDS TCA 72 bp TACATTTTGGTGACAGTTCCTTCACCGTCTGGTGCATaGTTCTGGAGAAGCTCTCGATCTGAGAGAGAAACT +
Preference number: 6 (lower is better)
Translates to: YILVTVPSPSGA*FWRSSRSERET
Trigger: AGTTTCTCTCTCAGATCGAGAGCTTCTCCAGAATCATGCACCAGACGGTGAAGGAACTGTCACCAAAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470050.1
CDS TCA 72 bp CTCGGTCTGTGGACCATCTCACTTTCAGCAAGTAGATaGAGTTTTGGTTTTTCAGCTGCTGTAGCCGATTCT +
Preference number: 6 (lower is better)
Translates to: LGLWTISLSASR*SFGFSAAVADS
Trigger: AGAATCGGCTACAGCAGCTGAAAAACCAAAACTTCATCTACTTGCTGAAAGTGAGATGGTCCACAGACCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480047.5
CDS GCA 72 bp TCTTGCCTATTAAACTTTGAGAAGTTAACCCTCCATTaGCCAAGATGTTTCAGGGGCTGGCCTGTCCAAACA +
Preference number: 6 (lower is better)
Translates to: SCLLNFEKLTLH*PRCFRGWPVQT
Trigger: TGTTTGGACAGGCCAGCCCCTGAAACATCTTGGGCAATGGAGGGTTAACTTCTCAAAGTTTAATAGGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000450646.6
ENST00000464803.6
ENST00000479594.5
ENST00000480047.5
ENST00000483077.5
CDS GCA 72 bp AACTTCCCAGCTGATCTACAATTCAATTCTCTTTTGTaGAAAACTCCAGACGCCGTCCAACAGTTCGGATCC +
Preference number: 6 (lower is better)
Translates to: NFPADLQFNSLL*KTPDAVQQFGS
Trigger: GGATCCGAACTGTTGGACGGCGTCTGGAGTTTTGCACAAAAGAGAATTGAATTGTAGATCAGCTGGGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479594.5
ENST00000483054.5
ENST00000643399.2
CDS CCA 72 bp AAAAGGACAACATACACTGTCCTTGCAATCCAACTGTaGATTCTTGGCACAAAGCAGGTGTGGGTAGGTGTT +
Preference number: 6 (lower is better)
Translates to: KRTTYTVLAIQL*ILGTKQVWVGV
Trigger: AACACCTACCCACACCTGCTTTGTGCCAAGAATCCACAGTTGGATTGCAAGGACAGTGTATGTTGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000421088.5
ENST00000448642.6
ENST00000450646.6
CDS CCA 72 bp CAGCTGGGTCTTGAACGCCTTTGCTTGTTCTTCATTTaGGCTCACTCTCATTTTTCCAAAAGGACAACATAC +
Preference number: 6 (lower is better)
Translates to: QLGLERLCLFFI*AHSHFSKRTTY
Trigger: GTATGTTGTCCTTTTGGAAAAATGAGAGTGAGCCCAAATGAAGAACAAGCAAAGGCGTTCAAGACCCAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000421088.5
ENST00000448642.6
ENST00000450646.6
CDS CAA 72 bp AGTAACTTCCCAGCTGATCTACAATTCAATTCTCTTTaGTGCAAAACTCCAGACGCCGTCCAACAGTTCGGA +
Preference number: 6 (lower is better)
Translates to: SNFPADLQFNSL*CKTPDAVQQFG
Trigger: TCCGAACTGTTGGACGGCGTCTGGAGTTTTGCACAAAAGAGAATTGAATTGTAGATCAGCTGGGAAGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479594.5
ENST00000483054.5
ENST00000643399.2
CDS TCA 72 bp CTTGTTGCATGGTTGCTGGTCTTGCCTATTAAACTTTaGGAAGTTAACCCTCCATTGCCCAAGATGTTTCAG +
Preference number: 6 (lower is better)
Translates to: LVAWLLVLPIKL*EVNPPLPKMFQ
Trigger: CTGAAACATCTTGGGCAATGGAGGGTTAACTTCTCAAAGTTTAATAGGCAAGACCAGCAACCATGCAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000450646.6
ENST00000464803.6
ENST00000476368.6
ENST00000479594.5
ENST00000480047.5
ENST00000483077.5
CDS GCA 72 bp GGTAGGTGTTTGGACTCTTTTCCTTCTCAGGAACAATaGTCTGGGGAACAGTTCTTTAGTTGGTTAGTTGAA +
Preference number: 6 (lower is better)
Translates to: GRCLDSFPSQEQ*SGEQFFSWLVE
Trigger: TTCAACTAACCAACTAAAGAACTGTTCCCCAGAGCATTGTTCCTGAGAAGGAAAAGAGTCCAAACACCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000360289.6
ENST00000436817.6
ENST00000448642.6
ENST00000450646.6
ENST00000464803.6
ENST00000476368.6
ENST00000479594.5
ENST00000480047.5
ENST00000483054.5
ENST00000483077.5
ENST00000488644.5
ENST00000643399.2
CDS TCA 72 bp CAAGAGCATCAACAATGCTCACTTTCAGCAAGTAGATaGAGTTTTGGTTTTTCAGCTGCTGTAGCCGATTCT +
Preference number: 6 (lower is better)
Translates to: QEHQQCSLSASR*SFGFSAAVADS
Trigger: AGAATCGGCTACAGCAGCTGAAAAACCAAAACTTCATCTACTTGCTGAAAGTGAGCATTGTTGATGCTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360289.6
ENST00000421088.5
ENST00000479594.5
ENST00000483077.5