RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HJURP (Homo sapiens)

Ensembl gene IDs: ENSG00000123485

Ensembl transcript IDs: ENST00000373395.3, ENST00000411486.7, ENST00000414924.5, ENST00000432087.5, ENST00000433484.2, ENST00000434039.1, ENST00000441687.5, ENST00000453122.1, ENST00000454020.1

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTTGTGTCTTCACTCGGAGTTCATCCACACGCATGCTGACAGCGTaGCTAAGGCCAGGCACTGTGCCAAGCGGTGAGGGGAGGCCTAGA +
Preference number: 1 (lower is better)
Translates to: LCVFTRSSSTRMLTA*LRPGTVPSGEGRPR
Trigger: TCTAGGCCTCCCCTCACCGCTTGGCACAGTGCCTGGCCTTAGGCACGCTGTCAGCATGCGTGTGGATGAACTCCGAGTGAAGACACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433484.2
3UTR-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTCAAGGGTCATTGCATaGAGGGCTCGAACTTACGTC +
Preference number: 2 (lower is better)
Translates to: HEESQALWLQERLGPPGLSRVIA*RARTYV
Trigger: GACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGA...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
3UTR-3UTR GCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTTCAAGGGTCATTGCATaGAGGGCTCGAACTTACGTC +
Preference number: 2 (lower is better)
Translates to: EESQALWLQERLGPPGLFSRVIA*RARTYV
Trigger: GACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGA...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
3UTR-3UTR GCA 90 bp GTTTGTCTGACAGCCCACTGGCCCAAAGGGTCGGAAACTAGCTTTGTGTCTTCACGCATGCTGACAGCGTaGCTAAGGCCAGGCACTGTG +
Preference number: 2 (lower is better)
Translates to: VCLTAHWPKGSETSFVSSRMLTA*LRPGTV
Trigger: CACAGTGCCTGGCCTTAGGCACGCTGTCAGCATGCG...TGAAGACACAAAGCTAGTTTCCGACCCTTTGGGCCAGTGGGCTGTCAGACAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433484.2
3UTR-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGCCGGGAGGCGGAAGTTaGAGTGAGCCAAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: PVINSFSKNHEESQALWLPGGGS*SEPRLC
Trigger: GCACAATCTTGGCTCACTGCAACTTCCGCCTCCCGG...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
3UTR-3UTR GCA 90 bp ACCAGGACTCTTTCTGGAGATACGACTGCAGTATCCGGGGGCAGGCACGGCAGGTCCAGCTCTGTTACCTaGACACTCAAAATACTCTGC +
Preference number: 2 (lower is better)
Translates to: TRTLSGDTTAVSGGRHGRSSSVT*TLKILC
Trigger: GCAGAGTATTTTGAGTGTGCAGGTAACAGAGCTGGA...CCTGCCGTGCCTGCCCCCGGATACTGCAGTCGTATCTCCAGAAAGAGTCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453122.1
3UTR-3UTR GCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCACCGGGAGGCGGAAGTTaGAGTGAGCCAAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: YFPSRVIACRARTYVSQAPGGGS*SEPRLC
Trigger: GCACAATCTTGGCTCACTGCAACTTCCGCCTCCCGG...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
3UTR-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTCCTTCAAGGGTCATTaGATGCAGGGCTCGAACTTA +
Preference number: 2 (lower is better)
Translates to: PVINSFSKNHEESQALWLSFKGH*MQGSNL
Trigger: TAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
3UTR-3UTR CCA 90 bp GCGGAGTCACACGTACATCCCTTCCAGCTCTGTTACCTGCACACTCAAAATACTAGCAGTATATCCACTTaGGTCAAGTATTTCCTTCTT +
Preference number: 2 (lower is better)
Translates to: AESHVHPFQLCYLHTQNTSSIST*VKYFLL
Trigger: AAGAAGGAAATACTTGACCCAAGTGGATATACTGCT...AGTATTTTGAGTGTGCAGGTAACAGAGCTGGAAGGGATGTACGTGTGACTCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453122.1
3UTR GCA 72 bp TTCACTCGGAGTTCATCCACACGCATGCTGACAGCGTaGCTAAGGCCAGGCACTGTGCCAAGCGGTGAGGGG +
Preference number: 3 (lower is better)
Translates to: FTRSSSTRMLTA*LRPGTVPSGEG
Trigger: CCCCTCACCGCTTGGCACAGTGCCTGGCCTTAGGCACGCTGTCAGCATGCGTGTGGATGAACTCCGAGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433484.2
3UTR CCA 72 bp ATGAAGCTGGTTTCGCTGGGTCACCAGGACTCTTTCTaGAGATACGACTGCAGTATCCGGGGGCAGGCACGG +
Preference number: 3 (lower is better)
Translates to: MKLVSLGHQDSF*RYDCSIRGQAR
Trigger: CCGTGCCTGCCCCCGGATACTGCAGTCGTATCTCCAGAAAGAGTCCTGGTGACCCAGCGAAACCAGCTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453122.1
3UTR-3UTR CAA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTTCCTTCAAGGGTCATaGCATGCAGGGCTCGAACTT +
Preference number: 3 (lower is better)
Translates to: PVINSFSKNHEESQALWLFLQGS*HAGLEL
Trigger: AAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
3UTR GCA 72 bp ACCAGGACTGTTTATTTTCCTTCAAGGGTCATTGCATaGAGGGCTCGAACTTACGTCTCACAAGCAAACAAT +
Preference number: 3 (lower is better)
Translates to: TRTVYFPSRVIA*RARTYVSQANN
Trigger: ATTGTTTGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATAAACAGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
3UTR TCA 72 bp CGAACTTACGTCTCACAAGCAAACAATATTCTCGAATaGAATGGGAAACAGGAGAGAGGATTCTCTGGACAT +
Preference number: 3 (lower is better)
Translates to: RTYVSQANNILE*NGKQERGFSGH
Trigger: ATGTCCAGAGAATCCTCTCTCCTGTTTCCCATTTCATTCGAGAATATTGTTTGCTTGTGAGACGTAAGTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCGCTGCATGCGCCTCTaGAAGCGGCGGCGACTGGCC +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLRCMRL*KRRRLA
Trigger: GGCCAGTCGCCGCCGCTTCCAGAGGCGCATGCAGCG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCCCAGGGAATTGCCCTaGCGTCCGGAGCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLPRELP*RPEPWG
Trigger: ACCCCAGGGCTCCGGACGCCAGGGCAATTCCCTGGG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CGGCAGGTGAGGCCAGTGAAGGCAGCGGAGTCACACGTACATCCCTTCCAGCTCGGCGGCGACTGGCCCTaGGCTTCTGCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RQVRPVKAAESHVHPFQLGGDWP*ASAAAG
Trigger: ACCAGCTGCTGCAGAAGCTCAGGGCCAGTCGCCGCC...GAGCTGGAAGGGATGTACGTGTGACTCCGCTGCCTTCACTGGCCTCACCTGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR GCA 90 bp ATACGACTGCAGTATCCGGGGGCAGGCACGGCAGGTGAGGCCAGTGAAGGCAGCCTATCAGCCGCTGCATaGGCCTCTGGAAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: IRLQYPGAGTAGEASEGSLSAAA*ASGSGG
Trigger: GCCGCCGCTTCCAGAGGCGCATGCAGCGGCTGATAG...GCTGCCTTCACTGGCCTCACCTGCCGTGCCTGCCCCCGGATACTGCAGTCGTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR GCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCTATCAGCCGCTGCATaGGCCTCTGGAAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFLSAAA*ASGSGG
Trigger: GCCGCCGCTTCCAGAGGCGCATGCAGCGGCTGATAG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCTCAGGACCCCAGGCTaGAGCTTGCACGGAGCCATC +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLLRTPG*SLHGAI
Trigger: GATGGCTCCGTGCAAGCTGCAGCCTGGGGTCCTGAG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS-3UTR TCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCGGGTTTCTAAGCCCTaGAGGCCACCAGGACTCGCA +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLRVSKP*RPPGLA
Trigger: TGCGAGTCCTGGTGGCCTTCAGGGCTTAGAAACCCG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCCTGGTCTCCCGGTCTaGCGGTGTTGTCCACCCCAT +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFPGLPV*RCCPPH
Trigger: ATGGGGTGGACAACACCGTCAGACCGGGAGACCAGG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCTGGCCCTGAGCTTCTaGAGCAGCTGGTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLLALSF*SSWSSS
Trigger: GGAAGACGACCAGCTGCTGCAGAAGCTCAGGGCCAG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGAGCCGGCTCATGGAGTaGAGCATCCCTGCGTACAGG +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLSRLME*SIPAYR
Trigger: CCTGTACGCAGGGATGCTGCACTCCATGAGCCGGCT...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCTGCTGCGGGCGAGTTaGGCTGTGTGTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFLLRAS*AVCGVG
Trigger: ACCAACCCCACACACAGCGCAACTCGCCCGCAGCAG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTTGGCGTCCGGAGCCCTaGGGTTCTGATAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFWRPEP*GSDSLG
Trigger: ACCCAGGCTATCAGAACCCCAGGGCTCCGGACGCCA...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCGGGTTTCTAAGCCCTaGAGGCCACCAGGACTCGCA +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFRVSKP*RPPGLA
Trigger: TGCGAGTCCTGGTGGCCTTCAGGGCTTAGAAACCCG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp GCGTGCCTAAGGCCAGGCACTGTGCCAAGCGGTGAGGGGAGGCCTAGAGTGTCCCCAAGTACGTTTGTCTaGCAGCCCACTGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ACLRPGTVPSGEGRPRVSPSTFV*QPTGPK
Trigger: CTTTGGGCCAGTGGGCTGTCAGACAAACGTACTTGG...GGACACTCTAGGCCTCCCCTCACCGCTTGGCACAGTGCCTGGCCTTAGGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433484.2
CDS-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTCTCTATCAGCCGCTaGATGCGCCTCTGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLFSISR*MRLWKR
Trigger: CCGCTTCCAGAGGCGCATGCAGCGGCTGATAGAGAA...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGAGGTCAGATGTCTGCTaGGGGCGAGTTGCGCTGTGT +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLRSDVC*GRVALC
Trigger: ACACAGCGCAACTCGCCCGCAGCAGACATCTGACCT...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTTCTCGTAGGTCAGCGTaGCCATTTGCACCACCGGGG +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFSRRSA*PFAPPG
Trigger: CCCCGGTGGTGCAAATGGCCACGCTGACCTACGAGA...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTCAACAGCCGGCTCATaGAGTGCAGCATCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLSTAGS*SAASLR
Trigger: ACGCAGGGATGCTGCACTCCATGAGCCGGCTGTTGA...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCACATCCGGCGAGGCTaGTTCCTGGGACTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFHIRRG*FLGLRQ
Trigger: TTGCCTGAGTCCCAGGAACCAGCCTCGCCGGATGTG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCTCTGTACATGTTCATaGCCCAGGAGTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLLCTCS*PRSPGG
Trigger: GCCTCCCGGACTCCTGGGCCATGAACATGTACAGAG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGGGCTGCAGGAGCGTCTaGGACCACCAGGACTGTTTA +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLGCRSV*DHQDCL
Trigger: TAAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCC...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTTCGTGCCATCCCTCGTaGTGGCACGAGCAACACATG +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFSCHPS*WHEQHM
Trigger: CATGTGTTGCTCGTGCCATCACGAGGGATGGCACGA...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGGGGCAGGCACCTACCTaGTTCCAGAGATCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLGQAPT*FQRSFA
Trigger: GGCAAAAGATCTCTGGAAGCAGGTAGGTGCCTGCCC...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGAGGGCTTTGAGGCACTaGAGGCTGGATCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLRALRH*RLDLSF
Trigger: GAAGGAGAGATCCAGCCTGCAGTGCCTCAAAGCCCT...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432087.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTGGCGAGGCTGGTTCCTaGGACTCAGGCAATATTCCC +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFGEAGS*DSGNIP
Trigger: GGGAATATTGCCTGAGTCCCAGGAACCAGCCTCGCC...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCTCTGTACATGTTCATaGCCCAGGAGTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFLCTCS*PRSPGG
Trigger: GCCTCCCGGACTCCTGGGCCATGAACATGTACAGAG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTGGCTGCAGGAGCGTCTaGGACCACCAGGACTGTTTA +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFGCRSV*DHQDCL
Trigger: TAAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCC...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GTTTCGCTGGGTCACCAGGACTCTTTCTGGAGATACGACTGCAGTATCCGGGGGCTCAGGACCCCAGGCTaGAGCTTGCACGGAGCCATC +
Preference number: 4 (lower is better)
Translates to: VSLGHQDSFWRYDCSIRGLRTPG*SLHGAI
Trigger: GATGGCTCCGTGCAAGCTGCAGCCTGGGGTCCTGAG...CCCCCGGATACTGCAGTCGTATCTCCAGAAAGAGTCCTGGTGACCCAGCGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGAGAAGCTGCTGCTACTaGTCTCTTGTAGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLRSCCY*SLVGRG
Trigger: GCCTCTCCCTACAAGAGACCAGTAGCAGCAGCTTCT...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGGGCGGCGACTGGCCCTaGGCTTCTGCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLGGDWP*ASAAAG
Trigger: ACCAGCTGCTGCAGAAGCTCAGGGCCAGTCGCCGCC...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CTAAGGCCAGGCACTGTGCCAAGCGGTGAGGGGAGGCCTAGAGTGTCCCATCTGGTGACTGTAAGGTGGTaGCAGCCCAGAACCAAGACA +
Preference number: 4 (lower is better)
Translates to: LRPGTVPSGEGRPRVSHLVTVRW*QPRTKT
Trigger: TGTCTTGGTTCTGGGCTGTCACCACCTTACAGTCAC...CAGATGGGACACTCTAGGCCTCCCCTCACCGCTTGGCACAGTGCCTGGCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433484.2
CDS-3UTR GCA 90 bp GCAGGTGAGGCCAGTGAAGGCAGCGGAGTCACACGTACATCCCTTCCAGCTCTGTTCTGGAGATACGACTaGAGTATCCGGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AGEASEGSGVTRTSLPALFWRYD*SIRGQA
Trigger: TGCCTGCCCCCGGATACTGCAGTCGTATCTCCAGAA...CAGAGCTGGAAGGGATGTACGTGTGACTCCGCTGCCTTCACTGGCCTCACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR GCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTTGCTTGATGGCTTTGTaGTCAACAGCCGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFCLMAL*STAGSW
Trigger: CCATGAGCCGGCTGTTGAGCACAAAGCCATCAAGCA...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTCCAGCTCTGTTACCTaGACACTGGATCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLSSSVT*TLDLSF
Trigger: GAAGGAGAGATCCAGTGTGCAGGTAACAGAGCTGGA...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441687.5
CDS-3UTR CCA 90 bp TCGCTGGGTCACCAGGACTCTTTCTGGAGATACGACTGCAGTATCCGGGGGCAGAGCTTCTGCAGCAGCTaGTCGTCTTCCACGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SLGHQDSFWRYDCSIRGQSFCSS*SSSTSS
Trigger: CGAGGACGTGGAAGACGACCAGCTGCTGCAGAAGCT...CTGCCCCCGGATACTGCAGTCGTATCTCCAGAAAGAGTCCTGGTGACCCAGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGGTGTCCTCGAAGGGCTaGTTGTACTTCTCTATCAGC +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLVSSKG*LYFSIS
Trigger: GCTGATAGAGAAGTACAACCAGCCCTTCGAGGACAC...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGATACGACTGCAGTATCCGGGGGCAGGCACGGCAGGTGAGGCCAGTGAAGGCGTGTCCTCGAAGGGCTaGTTGTACTTCTCTATCAGC +
Preference number: 4 (lower is better)
Translates to: EIRLQYPGAGTAGEASEGVSSKG*LYFSIS
Trigger: GCTGATAGAGAAGTACAACCAGCCCTTCGAGGACAC...GCCTTCACTGGCCTCACCTGCCGTGCCTGCCCCCGGATACTGCAGTCGTATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTAGAAGCTGCTGCTACTaGTCTCTTGTAGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFRSCCY*SLVGRG
Trigger: GCCTCTCCCTACAAGAGACCAGTAGCAGCAGCTTCT...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCGCTGTGTGTGGGGTTaGTCTTTGGAAGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLRCVWG*SLEVMK
Trigger: CTTCATCACTTCCAAAGACCAACCCCACACACAGCG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTGAGTTGCGCTGTGTGTaGGGTTGGTCTTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFELRCV*GWSLEV
Trigger: CACTTCCAAAGACCAACCCCACACACAGCGCAACTC...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGGGGGTTCTGATAGCCTaGGTCTTTTTGCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLGVLIA*VFLQGT
Trigger: AGTTCCCTGCAAAAAGACCCAGGCTATCAGAACCCC...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGCCCAGGGAATTGCCCTaGCGTCCGGAGCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLPRELP*RPEPWG
Trigger: ACCCCAGGGCTCCGGACGCCAGGGCAATTCCCTGGG...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp TACGTTTGTCTGACAGCCCACTGGCCCAAAGGGTCGGAAACTAGCTTTGTGTCTCCCAGGGAATTGCCCTaGCGTCCGGAGCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: YVCLTAHWPKGSETSFVSPRELP*RPEPWG
Trigger: ACCCCAGGGCTCCGGACGCCAGGGCAATTCCCTGGG...AGACACAAAGCTAGTTTCCGACCCTTTGGGCCAGTGGGCTGTCAGACAAACGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433484.2
CDS-3UTR TCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTGGTGGAGATGATGCTTaGTGGCTTTGTGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFGGDDA*WLCAQQ
Trigger: CTGTTGAGCACAAAGCCATCAAGCATCATCTCCACC...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGACGTTTTGGTGGAGATaGTGCTTGATGGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLTFWWR*CLMALC
Trigger: GCACAAAGCCATCAAGCATCATCTCCACCAAAACGT...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGCTATCAGCCGCTGCATaGGCCTCTGGAAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLLSAAA*ASGSGG
Trigger: GCCGCCGCTTCCAGAGGCGCATGCAGCGGCTGATAG...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTGCTTAAGAAGCTGCTaGTACTGGTCTCTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLCLRSC*YWSLVG
Trigger: CCCTACAAGAGACCAGTAGCAGCAGCTTCTTAAGCA...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCTGCTCTTATATCTGTaGCTCCTCCTGGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFLLLYL*LLLEFQ
Trigger: CTGGAACTCCAGGAGGAGGCACAGATATAAGAGCAG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GGTCGGAAACTAGCTTTGTGTCTTCACTCGGAGTTCATCCACACGCATGCTGACAGGCACCCAGGGAATTaGCCTGGCGTCCGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GRKLALCLHSEFIHTHADRHPGN*PGVRSP
Trigger: AGGGCTCCGGACGCCAGGGCAATTCCCTGGGTGCCT...GTCAGCATGCGTGTGGATGAACTCCGAGTGAAGACACAAAGCTAGTTTCCGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433484.2
CDS-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTCCTTCAAGGGTCATTaGATGCAGGGCTCGAACTTA +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLSFKGH*MQGSNL
Trigger: TAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGA...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GGAGTCACACGTACATCCCTTCCAGCTCTGTTACCTGCACACTCAAAATACTCTCGCTGCATGCGCCTCTaGAAGCGGCGGCGACTGGCC +
Preference number: 4 (lower is better)
Translates to: GVTRTSLPALLPAHSKYSRCMRL*KRRRLA
Trigger: GGCCAGTCGCCGCCGCTTCCAGAGGCGCATGCAGCG...AGAGTATTTTGAGTGTGCAGGTAACAGAGCTGGAAGGGATGTACGTGTGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTAATTCTCAATCCCTGTaGCGTCTCGTAGGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFNSQSL*RLVGQR
Trigger: ACGCTGACCTACGAGACGCCACAGGGATTGAGAATT...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGAAGGATCCCATTCTCTaGGAGATGAAGCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLKDPIL*EMKLVS
Trigger: CGAAACCAGCTTCATCTCCCAGAGAATGGGATCCTT...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCTAAGGCCATGTCTGTaGAGGAAGGATGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLLRPCL*RKDAKD
Trigger: ATCCTTTGCATCCTTCCTCCACAGACATGGCCTTAG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTATTCCTTCCGTGGCCTaGCACTTCTTTATCTGGGAC +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFIPSVA*HFFIWD
Trigger: GTCCCAGATAAAGAAGTGCCAGGCCACGGAAGGAAT...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp GTTTCGCTGGGTCACCAGGACTCTTTCTGGAGATACGACTGCAGTATCCGGGGGTTTTTCAAAGGGCTTTaGGGCACTGCAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VSLGHQDSFWRYDCSIRGFFKGL*GTAGGS
Trigger: GGAGCCGCCTGCAGTGCCTCAAAGCCCTTTGAAAAA...CCCCCGGATACTGCAGTCGTATCTCCAGAAAGAGTCCTGGTGACCCAGCGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGCCCCAGGCTGCAGCTTaGACGGAGCCATCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLPQAAA*TEPSVL
Trigger: CAGGACAGATGGCTCCGTGCAAGCTGCAGCCTGGGG...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS-3UTR GCA 90 bp CGGAGTCACACGTACATCCCTTCCAGCTCTGTTACCTGCACACTCAAAATACTCCCCAGGACTGTGCGGTaGGAGGGAAGCTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: RSHTYIPSSSVTCTLKILPRTVR*EGSSGP
Trigger: GGGTCCTGAGCTTCCCTCGCACCGCACAGTCCTGGG...GAGTATTTTGAGTGTGCAGGTAACAGAGCTGGAAGGGATGTACGTGTGACTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR GCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTTGCTTAAGAAGCTGCTaGTACTGGTCTCTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFCLRSC*YWSLVG
Trigger: CCCTACAAGAGACCAGTAGCAGCAGCTTCTTAAGCA...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGGGACTGAAAGAGTTTTaGTGGGTGACACTGACTTTC +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLGLKEF*WVTLTF
Trigger: GAAAGTCAGTGTCACCCAGCAAAACTCTTTCAGTCC...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAAGCGCCAACCCGGACTaGAGGGCCTCGCGCGCCACA +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQASANPD*RASRAT
Trigger: TGTGGCGCGCGAGGCCCTGCAGTCCGGGTTGGCGCT...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCACGCTGCATGCGCCTCTaGAAGCGGCGGCGACTGGCC +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQARCMRL*KRRRLA
Trigger: GGCCAGTCGCCGCCGCTTCCAGAGGCGCATGCAGCG...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTCATGGAGGAGTCCTaGATCTCTCCTTCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLFMEES*ISPSFL
Trigger: AAGAAACGAAGGAGAGATCCAGGACTCCTCCATGAA...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCACCAGGACTCTTTCTaGAGATACGACTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFHQDSF*RYDCSI
Trigger: GATACTGCAGTCGTATCTCCAGAAAGAGTCCTGGTG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCTAAGGCCATGTCTGTaGAGGAAGGATGCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFLRPCL*RKDAKD
Trigger: ATCCTTTGCATCCTTCCTCCACAGACATGGCCTTAG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGGTTGTCCACCCCATCTaGGGCACCCAGGGAATTGCC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLVVHPI*GTQGIA
Trigger: GGCAATTCCCTGGGTGCCTCAGATGGGGTGGACAAC...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGACAAAAACGTCACCATaGTATCCTGTCATCAACAGC +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLTKTSP*YPVINS
Trigger: GCTGTTGATGACAGGATATCATGGTGACGTTTTTGT...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGCTGGCCCTGAGCTTCTaGAGCAGCTGGTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLLALSF*SSWSSS
Trigger: GGAAGACGACCAGCTGCTGCAGAAGCTCAGGGCCAG...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CAGCGGAGTCACACGTACATCCCTTCCAGCTCTGTTACCTGCACACTCAAAATACCCCAGGCTGCAGCTTaGACGGAGCCATCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: QRSHTYIPSSSVTCTLKIPQAAA*TEPSVL
Trigger: CAGGACAGATGGCTCCGTGCAAGCTGCAGCCTGGGG...TATTTTGAGTGTGCAGGTAACAGAGCTGGAAGGGATGTACGTGTGACTCCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCACGTCCTCGCCCTCCATaGCGCGCAGCGTACCCAGCA +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQARPRPP*RAAYPA
Trigger: TGCTGGGTACGCTGCGCGCCATGGAGGGCGAGGACG...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTCTCGTAGGTCAGCGTaGCCATTTGCACCACCGGGG +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLSRRSA*PFAPPG
Trigger: CCCCGGTGGTGCAAATGGCCACGCTGACCTACGAGA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GGCAGCGGAGTCACACGTACATCCCTTCCAGCTCTGTTACCTGCACACTCAAAATGTCCGCGGGCTTCATaGAGGAGTCCTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: GSGVTRTSLPALLPAHSKCPRAS*RSPGSL
Trigger: GAGAGATCCAGGACTCCTCCATGAAGCCCGCGGACA...TTTTGAGTGTGCAGGTAACAGAGCTGGAAGGGATGTACGTGTGACTCCGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGCACATCCGGCGAGGCTaGTTCCTGGGACTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLHIRRG*FLGLRQ
Trigger: TTGCCTGAGTCCCAGGAACCAGCCTCGCCGGATGTG...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTTTGCTTTTGCTTTGCTaGAAGGTAAACTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFLLLLC*KVNSAC
Trigger: GCAGGCTGAGTTTACCTTCCAGCAAAGCAAAAGCAA...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTGTGAAGAGCTGCCCTaGTCTCCCGGTCTGACGGTG +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLCEELP*SPGLTV
Trigger: CACCGTCAGACCGGGAGACCAGGGCAGCTCTTCACA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCTGTTACCTGCACACTaGATCTCTCCTTCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFLLPAH*ISPSFL
Trigger: AAGAAACGAAGGAGAGATCCAGTGTGCAGGTAACAG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441687.5
CDS-3UTR TCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTACAAAAACGTCACCATaGTATCCTGTCATCAACAGC +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFTKTSP*YPVINS
Trigger: GCTGTTGATGACAGGATATCATGGTGACGTTTTTGT...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCATCTAATACGTTCTTaGAATCTCTTAATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLHLIRS*NLLMPL
Trigger: CAGGGGCATTAAGAGATTGCAAGAACGTATTAGATG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GCGGAGTCACACGTACATCCCTTCCAGCTCTGTTACCTGCACACTCAAAATACTTCTCGTAGGTCAGCGTaGCCATTTGCACCACCGGGG +
Preference number: 4 (lower is better)
Translates to: AESHVHPFQLCYLHTQNTSRRSA*PFAPPG
Trigger: CCCCGGTGGTGCAAATGGCCACGCTGACCTACGAGA...AGTATTTTGAGTGTGCAGGTAACAGAGCTGGAAGGGATGTACGTGTGACTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp GCTGGGTCACCAGGACTCTTTCTGGAGATACGACTGCAGTATCCGGGGGCAGGCTTCATGGAGGAGTCCTaGATCTCTCCTTCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: AGSPGLFLEIRLQYPGAGFMEES*ISPSFL
Trigger: AAGAAACGAAGGAGAGATCCAGGACTCCTCCATGAA...GCCTGCCCCCGGATACTGCAGTCGTATCTCCAGAAAGAGTCCTGGTGACCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp CAGGTGAGGCCAGTGAAGGCAGCGGAGTCACACGTACATCCCTTCCAGCTCTGTAAGGATCCCATTCTCTaGGAGATGAAGCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: QVRPVKAAESHVHPFQLCKDPIL*EMKLVS
Trigger: CGAAACCAGCTTCATCTCCCAGAGAATGGGATCCTT...ACAGAGCTGGAAGGGATGTACGTGTGACTCCGCTGCCTTCACTGGCCTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGGGCGAGGCTGGTTCCTaGGACTCAGGCAATATTCCC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLGEAGS*DSGNIP
Trigger: GGGAATATTGCCTGAGTCCCAGGAACCAGCCTCGCC...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCTATTTACTCCAGCATaGGTTTCACCAATGTATTCT +
Preference number: 4 (lower is better)
Translates to: HEESQALWLQERLGPPGLLFTPA*VSPMYS
Trigger: AGAATACATTGGTGAAACTCATGCTGGAGTAAATAG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTTCTGGAGATACGACTaGAGTATCCGGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLFWRYD*SIRGQA
Trigger: TGCCTGCCCCCGGATACTGCAGTCGTATCTCCAGAA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGGGGCAGGCACCTACCTaGTTCCAGAGATCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLGQAPT*FQRSFA
Trigger: GGCAAAAGATCTCTGGAAGCAGGTAGGTGCCTGCCC...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCACTGCTGCGGGCGAGTTaGGCTGTGTGTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQALLRAS*AVCGVG
Trigger: ACCAACCCCACACACAGCGCAACTCGCCCGCAGCAG...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTTCGAACTTCCATACTTaGTTTATCTGTAGACACTCC +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFSNFHT*FICRHS
Trigger: GGAGTGTCTACAGATAAAGCAAGTATGGAAGTTCGA...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGCTTCCTGGTCTGACGTaGCATCGACCTCACCGCTTT +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLLPGLT*HRPHRF
Trigger: AAAGCGGTGAGGTCGATGCCACGTCAGACCAGGAAG...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCTTGGATCTAACTTATaGATTTGGGGTCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFLGSNL*IWGLLT
Trigger: AGTCAACAGACCCCAAATCCATAAGTTAGATCCAAG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTGCCCTGTCGTATTGTTaGTCTGGAAACTATTTTTAC +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFALSYC*SGNYFY
Trigger: GTAAAAATAGTTTCCAGACCAACAATACGACAGGGC...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GTTTGTCTGACAGCCCACTGGCCCAAAGGGTCGGAAACTAGCTTTGTGTCTTCATGTCTGACAGCCCACTaGCCCAAAGGGTCGGAAACT +
Preference number: 4 (lower is better)
Translates to: VCLTAHWPKGSETSFVSSCLTAH*PKGSET
Trigger: AGTTTCCGACCCTTTGGGCCAGTGGGCTGTCAGACA...TGAAGACACAAAGCTAGTTTCCGACCCTTTGGGCCAGTGGGCTGTCAGACAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433484.2
CDS-3UTR TCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGATTTCAATCTCCCTCTaGCGGTTCTCTCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLISISL*RFSPWP
Trigger: GGGCCATGGAGAGAACCGTCAGAGGGAGATTGAAAT...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAGTTGTCCACCCCATCTaGGGCACCCAGGGAATTGCC +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQAVVHPI*GTQGIA
Trigger: GGCAATTCCCTGGGTGCCTCAGATGGGGTGGACAAC...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGTCACACGTACATCCCTTCCAGCTCTGTTACCTGCACACTCAAAATACTCTGTTCTCTATCAGCCGCTaGATGCGCCTCTGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: ESHVHPFQLCYLHTQNTLFSISR*MRLWKR
Trigger: CCGCTTCCAGAGGCGCATGCAGCGGCTGATAGAGAA...CAGAGTATTTTGAGTGTGCAGGTAACAGAGCTGGAAGGGATGTACGTGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTAGCAGTATATCCACTTaGGTCAAGTATTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFSSIST*VKYFLL
Trigger: AAGAAGGAAATACTTGACCCAAGTGGATATACTGCT...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411486.7
ENST00000432087.5
CDS-3UTR CCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAACGCTGCATGCGCCTCTaGAAGCGGCGGCGACTGGCC +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQRCMRL*KRRRLA
Trigger: GGCCAGTCGCCGCCGCTTCCAGAGGCGCATGCAGCG...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGAGAAGCTGCTGCTACTaGTCTCTTGTAGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLRSCCY*SLVGRG
Trigger: GCCTCTCCCTACAAGAGACCAGTAGCAGCAGCTTCT...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTTCTAACTTATGGATTTaGGGTCTGTTGACTTCAAGA +
Preference number: 4 (lower is better)
Translates to: EESQALWLQERLGPPGLFSNLWI*GLLTSR
Trigger: TCTTGAAGTCAACAGACCCCAAATCCATAAGTTAGA...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCATGTGAAGAGCTGCCCTaGTCTCCCGGTCTGACGGTG +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQACEELP*SPGLTV
Trigger: CACCGTCAGACCGGGAGACCAGGGCAGCTCTTCACA...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGGGTGGAGATGATGCTTaGTGGCTTTGTGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLGGDDA*WLCAQQ
Trigger: CTGTTGAGCACAAAGCCATCAAGCATCATCTCCACC...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGCTGCTCTTATATCTGTaGCTCCTCCTGGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLLLLYL*LLLEFQ
Trigger: CTGGAACTCCAGGAGGAGGCACAGATATAAGAGCAG...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTCGAGGGTGTCACTTTaGGCTCCTTCCAACTTGGAT +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLSRVSL*APSNLD
Trigger: ATCCAAGTTGGAAGGAGCGCAAAGTGACACCCTCGA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAAGGTCAGATGTCTGCTaGGGGCGAGTTGCGCTGTGT +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQARSDVC*GRVALC
Trigger: ACACAGCGCAACTCGCCCGCAGCAGACATCTGACCT...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTCAAGGGTCATTGCATaGAGGGCTCGAACTTACGTC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLSRVIA*RARTYV
Trigger: GACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GACAATGAGGCAAAGGGAACTTTGGCCTTAATGAGCCACTTCATTTCCGATTTCCGCATGCTGACAGCGTaGCTAAGGCCAGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: DNEAKGTLALMSHFISDFRMLTA*LRPGTV
Trigger: CACAGTGCCTGGCCTTAGGCACGCTGTCAGCATGCG...GAAATCGGAAATGAAGTGGCTCATTAAGGCCAAAGTTCCCTTTGCCTCATTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433484.2
CDS-3UTR CCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAAGCTTCTGCAGCAGCTaGTCGTCTTCCACGTCCTCG +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQASFCSS*SSSTSS
Trigger: CGAGGACGTGGAAGACGACCAGCTGCTGCAGAAGCT...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGGTGTCCTCGAAGGGCTaGTTGTACTTCTCTATCAGC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLVSSKG*LYFSIS
Trigger: GCTGATAGAGAAGTACAACCAGCCCTTCGAGGACAC...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCATGTCCGCGGGCTTCATaGAGGAGTCCTGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQACPRAS*RSPGSL
Trigger: GAGAGATCCAGGACTCCTCCATGAAGCCCGCGGACA...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS-3UTR CCA 90 bp GGCAGCGGAGTCACACGTACATCCCTTCCAGCTCTGTTACCTGCACACTCAAAACACCAGGACTCTTTCTaGAGATACGACTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: GSGVTRTSLPALLPAHSKHQDSF*RYDCSI
Trigger: GATACTGCAGTCGTATCTCCAGAAAGAGTCCTGGTG...TTTTGAGTGTGCAGGTAACAGAGCTGGAAGGGATGTACGTGTGACTCCGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAGGCGAGGCTGGTTCCTaGGACTCAGGCAATATTCCC +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQAGEAGS*DSGNIP
Trigger: GGGAATATTGCCTGAGTCCCAGGAACCAGCCTCGCC...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGAAGATGAATCGCTCTTaGGCAGGCACCTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLKMNRS*AGTYLL
Trigger: AAGCAGGTAGGTGCCTGCCCAAGAGCGATTCATCTT...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGATTCCTTCCGTGGCCTaGCACTTCTTTATCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLIPSVA*HFFIWD
Trigger: GTCCCAGATAAAGAAGTGCCAGGCCACGGAAGGAAT...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTTTTTCAAAGGGCTTTaGGGCACTGCAGGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLFFKGL*GTAGAK
Trigger: CTTAGCACCTGCAGTGCCTCAAAGCCCTTTGAAAAA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS-3UTR TCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGACGTTTTGGTGGAGATaGTGCTTGATGGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLTFWWR*CLMALC
Trigger: GCACAAAGCCATCAAGCATCATCTCCACCAAAACGT...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCATCCTTGGAGCTCCTCTaGGAACGTCTGGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQASLELL*ERLAPL
Trigger: CAAAGGAGCCAGACGTTCTCAGAGGAGCTCCAAGGA...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCACTTTTTGCAGGGAACTaGTGGTCCCTCGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQALFAGN*WSLVPS
Trigger: GGATGGCACGAGGGACCATCAGTTCCCTGCAAAAAG...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAACTATCAGCCGCTGCATaGGCCTCTGGAAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQLSAAA*ASGSGG
Trigger: GCCGCCGCTTCCAGAGGCGCATGCAGCGGCTGATAG...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGGGCTGCTTAAGAAGCTaGTGCTACTGGTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLGCLRS*CYWSLV
Trigger: TACAAGAGACCAGTAGCAGCAGCTTCTTAAGCAGCC...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAACACAGGCGCTGTGGCTaGAGGAGCGTCTGGGACCAC +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQHRRCG*RSVWDH
Trigger: GTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTG...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCAGCGCCAACCCGGACTaGAGGGCCTCGCGCGCCACA +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPSANPD*RASRAT
Trigger: TGTGGCGCGCGAGGCCCTGCAGTCCGGGTTGGCGCT...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCACGTCCTCGCCCTCCATaGCGCGCAGCGTACCCAGCA +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPRPRPP*RAAYPA
Trigger: TGCTGGGTACGCTGCGCGCCATGGAGGGCGAGGACG...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GCGGAGTCACACGTACATCCCTTCCAGCTCTGTTACCTGCACACTCAAAATACTAATTCTCAATCCCTGTaGCGTCTCGTAGGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: AESHVHPFQLCYLHTQNTNSQSL*RLVGQR
Trigger: ACGCTGACCTACGAGACGCCACAGGGATTGAGAATT...AGTATTTTGAGTGTGCAGGTAACAGAGCTGGAAGGGATGTACGTGTGACTCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGCACCAGGACTCTTTCTaGAGATACGACTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLHQDSF*RYDCSI
Trigger: GATACTGCAGTCGTATCTCCAGAAAGAGTCCTGGTG...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGAAGGATCCCATTCTCTaGGAGATGAAGCTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLKDPIL*EMKLVS
Trigger: CGAAACCAGCTTCATCTCCCAGAGAATGGGATCCTT...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCGGCGGCGACTGGCCCTaGGCTTCTGCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPGGDWP*ASAAAG
Trigger: ACCAGCTGCTGCAGAAGCTCAGGGCCAGTCGCCGCC...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTTGCTTTTGCTTTGCTaGAAGGTAAACTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLLLLLC*KVNSAC
Trigger: GCAGGCTGAGTTTACCTTCCAGCAAAGCAAAAGCAA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATGGCGTCCGGAGCCCTaGGGTTCTGATAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQWRPEP*GSDSLG
Trigger: ACCCAGGCTATCAGAACCCCAGGGCTCCGGACGCCA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS-3UTR CCA 90 bp CCCAGGCTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCTGGCGTCCGGAGCCCTaGGGTTCTGATAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PRLSQKQTNKQTNKQITPWRPEP*GSDSLG
Trigger: ACCCAGGCTATCAGAACCCCAGGGCTCCGGACGCCA...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433484.2
CDS-3UTR TCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAAGTTGTCCACCCCATCTaGGGCACCCAGGGAATTGCC +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQVVHPI*GTQGIA
Trigger: GGCAATTCCCTGGGTGCCTCAGATGGGGTGGACAAC...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS-3UTR TCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCACCTGGTCTCCCGGTCTaGCGGTGTTGTCCACCCCAT +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPPGLPV*RCCPPH
Trigger: ATGGGGTGGACAACACCGTCAGACCGGGAGACCAGG...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCCCCAGGACTGTGCGGTaGGAGGGAAGCTCAGGACCC +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPPRTVR*EGSSGP
Trigger: GGGTCCTGAGCTTCCCTCGCACCGCACAGTCCTGGG...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
48% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS-3UTR GCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAAAGCCGGCTCATGGAGTaGAGCATCCCTGCGTACAGG +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQSRLME*SIPAYR
Trigger: CCTGTACGCAGGGATGCTGCACTCCATGAGCCGGCT...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGCTGGAGTTCCAGTTTTaGATGATGAACGTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLLEFQF*MMNVLV
Trigger: CACCAAAACGTTCATCATGCAAAACTGGAACTCCAG...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCACTGCTCTTATATCTGTaGCTCCTCCTGGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQALLLYL*LLLEFQ
Trigger: CTGGAACTCCAGGAGGAGGCACAGATATAAGAGCAG...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCAGGCACCCAGGGAATTaGCCTGGCGTCCGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPRHPGN*PGVRSP
Trigger: AGGGCTCCGGACGCCAGGGCAATTCCCTGGGTGCCT...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCCACAGGCGCTGTGGCTaGAGGAGCGTCTGGGACCAC +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPHRRCG*RSVWDH
Trigger: GTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTG...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GTGAAGGCAGCGGAGTCACACGTACATCCCTTCCAGCTCTGTTACCTGCACACTAGCAGTATATCCACTTaGGTCAAGTATTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VKAAESHVHPFQLCYLHTSSIST*VKYFLL
Trigger: AAGAAGGAAATACTTGACCCAAGTGGATATACTGCT...AGTGTGCAGGTAACAGAGCTGGAAGGGATGTACGTGTGACTCCGCTGCCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAACACATCCGGCGAGGCTaGTTCCTGGGACTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQHIRRG*FLGLRQ
Trigger: TTGCCTGAGTCCCAGGAACCAGCCTCGCCGGATGTG...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCCAGGCTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCTGTGAAGAGCTGCCCTaGTCTCCCGGTCTGACGGTG +
Preference number: 4 (lower is better)
Translates to: PRLSQKQTNKQTNKQITPCEELP*SPGLTV
Trigger: CACCGTCAGACCGGGAGACCAGGGCAGCTCTTCACA...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433484.2
CDS-3UTR TCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGGGATTTGGGGTCTGTTaGCTTCAAGAAAAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLGFGVC*LQEKLF
Trigger: AAAAAGCTTTTCTTGAAGTCAACAGACCCCAAATCC...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATCGTGCCATCCCTCGTaGTGGCACGAGCAACACATG +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQSCHPS*WHEQHM
Trigger: CATGTGTTGCTCGTGCCATCACGAGGGATGGCACGA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAGTTGTCCACCCCATCTaGGGCACCCAGGGAATTGCC +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPVVHPI*GTQGIA
Trigger: GGCAATTCCCTGGGTGCCTCAGATGGGGTGGACAAC...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS-3UTR TCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCCCTGGTCTCCCGGTCTaGCGGTGTTGTCCACCCCAT +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPPGLPV*RCCPPH
Trigger: ATGGGGTGGACAACACCGTCAGACCGGGAGACCAGG...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGCATCTAATACGTTCTTaGAATCTCTTAATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLHLIRS*NLLMPL
Trigger: CAGGGGCATTAAGAGATTGCAAGAACGTATTAGATG...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAAAGGTAAACTCAGCCTaGGGGTTTCTAAGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQAKVNSA*GFLSPE
Trigger: TTCAGGGCTTAGAAACCCGCAGGCTGAGTTTACCTT...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCCTGCTGCGGGCGAGTTaGGCTGTGTGTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPLLRAS*AVCGVG
Trigger: ACCAACCCCACACACAGCGCAACTCGCCCGCAGCAG...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTCGAACTTCCATACTTaGTTTATCTGTAGACACTCC +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLSNFHT*FICRHS
Trigger: GGAGTGTCTACAGATAAAGCAAGTATGGAAGTTCGA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAACCGGGAGGCGGAAGTTaGAGTGAGCCAAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQPGGGS*SEPRLC
Trigger: GCACAATCTTGGCTCACTGCAACTTCCGCCTCCCGG...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCTGGCGTCCGGAGCCCTaGGGTTCTGATAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPWRPEP*GSDSLG
Trigger: ACCCAGGCTATCAGAACCCCAGGGCTCCGGACGCCA...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCATGTGAAGAGCTGCCCTaGTCTCCCGGTCTGACGGTG +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPCEELP*SPGLTV
Trigger: CACCGTCAGACCGGGAGACCAGGGCAGCTCTTCACA...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS-3UTR GCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCATCCAGCTCTGTTACCTaGACACTCAAAATACTCTGC +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQASSSVT*TLKILC
Trigger: GCAGAGTATTTTGAGTGTGCAGGTAACAGAGCTGGA...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411486.7
ENST00000432087.5
CDS-3UTR GCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCATTCTCTATCAGCCGCTaGATGCGCCTCTGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPFSISR*MRLWKR
Trigger: CCGCTTCCAGAGGCGCATGCAGCGGCTGATAGAGAA...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATTCTGGAGATACGACTaGAGTATCCGGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQFWRYD*SIRGQA
Trigger: TGCCTGCCCCCGGATACTGCAGTCGTATCTCCAGAA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCAGCCGGCTCATGGAGTaGAGCATCCCTGCGTACAGG +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPSRLME*SIPAYR
Trigger: CCTGTACGCAGGGATGCTGCACTCCATGAGCCGGCT...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAGGACTGAAAGAGTTTTaGTGGGTGACACTGACTTTC +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQAGLKEF*WVTLTF
Trigger: GAAAGTCAGTGTCACCCAGCAAAACTCTTTCAGTCC...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAAGCTTCTGCAGCAGCTaGTCGTCTTCCACGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPSFCSS*SSSTSS
Trigger: CGAGGACGTGGAAGACGACCAGCTGCTGCAGAAGCT...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCTCTCGTAGGTCAGCGTaGCCATTTGCACCACCGGGG +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPSRRSA*PFAPPG
Trigger: CCCCGGTGGTGCAAATGGCCACGCTGACCTACGAGA...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCATCAACAGCCGGCTCATaGAGTGCAGCATCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPSTAGS*SAASLR
Trigger: ACGCAGGGATGCTGCACTCCATGAGCCGGCTGTTGA...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTCTAACTTATGGATTTaGGGTCTGTTGACTTCAAGA +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLSNLWI*GLLTSR
Trigger: TCTTGAAGTCAACAGACCCCAAATCCATAAGTTAGA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGGATTATATGTTGCACTaGAGTCGAAGTAAATCAAGG +
Preference number: 4 (lower is better)
Translates to: PVINSFSKNHEESQALWLDYMLH*SRSKSR
Trigger: CCTTGATTTACTTCGACTCCAGTGCAACATATAATC...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAGGCTGCAGGAGCGTCTaGGACCACCAGGACTGTTTA +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPGCRSV*DHQDCL
Trigger: TAAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCC...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAAATTTCAATCTCCCTCTaGCGGTTCTCTCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQISISL*RFSPWP
Trigger: GGGCCATGGAGAGAACCGTCAGAGGGAGATTGAAAT...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAACAAAAACGTCACCATaGTATCCTGTCATCAACAGC +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQATKTSP*YPVINS
Trigger: GCTGTTGATGACAGGATATCATGGTGACGTTTTTGT...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCTTCTCTATCAGCCGCTaGATGCGCCTCTGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPFSISR*MRLWKR
Trigger: CCGCTTCCAGAGGCGCATGCAGCGGCTGATAGAGAA...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAGGAGTGCAGCATCCCTaGGTACAGGTCACTGATGGT +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPGVQHP*VQVTDG
Trigger: ACCATCAGTGACCTGTACGCAGGGATGCTGCACTCC...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATGCTTGATGGCTTTGTaGTCAACAGCCGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQCLMAL*STAGSW
Trigger: CCATGAGCCGGCTGTTGAGCACAAAGCCATCAAGCA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCAGGTCAGATGTCTGCTaGGGGCGAGTTGCGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPRSDVC*GRVALC
Trigger: ACACAGCGCAACTCGCCCGCAGCAGACATCTGACCT...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCCTCTGTACATGTTCATaGCCCAGGAGTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPLCTCS*PRSPGG
Trigger: GCCTCCCGGACTCCTGGGCCATGAACATGTACAGAG...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCCCATTCTCTGGGAGATaGAGCTGGTTTCGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPPFSGR*SWFRWV
Trigger: GACCCAGCGAAACCAGCTTCATCTCCCAGAGAATGG...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAAGGTGGAGATGATGCTTaGTGGCTTTGTGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQGGDDA*WLCAQQ
Trigger: CTGTTGAGCACAAAGCCATCAAGCATCATCTCCACC...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCTCCTTGGAGCTCCTCTaGGAACGTCTGGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPSLELL*ERLAPL
Trigger: CAAAGGAGCCAGACGTTCTCAGAGGAGCTCCAAGGA...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCCTTTTTGCAGGGAACTaGTGGTCCCTCGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPLFAGN*WSLVPS
Trigger: GGATGGCACGAGGGACCATCAGTTCCCTGCAAAAAG...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCTTCTGGAGATACGACTaGAGTATCCGGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPFWRYD*SIRGQA
Trigger: TGCCTGCCCCCGGATACTGCAGTCGTATCTCCAGAA...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCGGAGTGCAGCATCCCTaGGTACAGGTCACTGATGGT +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPGVQHP*VQVTDG
Trigger: ACCATCAGTGACCTGTACGCAGGGATGCTGCACTCC...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATCGAGGGTGTCACTTTaGGCTCCTTCCAACTTGGAT +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQSRVSL*APSNLD
Trigger: ATCCAAGTTGGAAGGAGCGCAAAGTGACACCCTCGA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATCAAGGGTCATTGCATaGAGGGCTCGAACTTACGTC +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQSRVIA*RARTYV
Trigger: GACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAAAATTCTCAATCCCTGTaGCGTCTCGTAGGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQNSQSL*RLVGQR
Trigger: ACGCTGACCTACGAGACGCCACAGGGATTGAGAATT...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCGCAACTGACTCTTCCTaGTCTGACGTGGCATCGACC +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPATDSS*SDVAST
Trigger: GGTCGATGCCACGTCAGACCAGGAAGAGTCAGTTGC...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS-3UTR CCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAGCCCTGTCGTATTGTTaGTCTGGAAACTATTTTTAC +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQAALSYC*SGNYFY
Trigger: GTAAAAATAGTTTCCAGACCAACAATACGACAGGGC...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAGAGTTGCGCTGTGTGTaGGGTTGGTCTTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPELRCV*GWSLEV
Trigger: CACTTCCAAAGACCAACCCCACACACAGCGCAACTC...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCACTATTTACTCCAGCATaGGTTTCACCAATGTATTCT +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQALFTPA*VSPMYS
Trigger: AGAATACATTGGTGAAACTCATGCTGGAGTAAATAG...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCATTTTTCAAAGGGCTTTaGGGCACTGCAGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPFFKGL*GTAGWI
Trigger: GATCCAGCCTGCAGTGCCTCAAAGCCCTTTGAAAAA...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432087.5
CDS-3UTR GCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCATCGAGGGTGTCACTTTaGGCTCCTTCCAACTTGGAT +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPSRVSL*APSNLD
Trigger: ATCCAAGTTGGAAGGAGCGCAAAGTGACACCCTCGA...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAAAAAGGCACTGTCATCTaGCCAGGAGATTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQKGTVI*PGDLRQ
Trigger: TTGCCTCAAATCTCCTGGGCAGATGACAGTGCCTTT...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATCCTTCAAGGGTCATTaGATGCAGGGCTCGAACTTA +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQSFKGH*MQGSNL
Trigger: TAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAAATTCTCAATCCCTGTaGCGTCTCGTAGGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPNSQSL*RLVGQR
Trigger: ACGCTGACCTACGAGACGCCACAGGGATTGAGAATT...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAACACCAGGACTCTTTCTaGAGATACGACTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQHQDSF*RYDCSI
Trigger: GATACTGCAGTCGTATCTCCAGAAAGAGTCCTGGTG...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAGATTATATGTTGCACTaGAGTCGAAGTAAATCAAGG +
Preference number: 4 (lower is better)
Translates to: YFPSRVIACRARTYVSQADYMLH*SRSKSR
Trigger: CCTTGATTTACTTCGACTCCAGTGCAACATATAATC...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAATTCCTTCCGTGGCCTaGCACTTCTTTATCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPIPSVA*HFFIWD
Trigger: GTCCCAGATAAAGAAGTGCCAGGCCACGGAAGGAAT...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAGGGGTTCTGATAGCCTaGGTCTTTTTGCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPGVLIA*VFLQGT
Trigger: AGTTCCCTGCAAAAAGACCCAGGCTATCAGAACCCC...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCATGCTTAAGAAGCTGCTaGTACTGGTCTCTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPCLRSC*YWSLVG
Trigger: CCCTACAAGAGACCAGTAGCAGCAGCTTCTTAAGCA...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAGGCTGCTTAAGAAGCTaGTGCTACTGGTCTCTTGTA +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPGCLRS*CYWSLV
Trigger: TACAAGAGACCAGTAGCAGCAGCTTCTTAAGCAGCC...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCGTGTCCTCGAAGGGCTaGTTGTACTTCTCTATCAGC +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPVSSKG*LYFSIS
Trigger: GCTGATAGAGAAGTACAACCAGCCCTTCGAGGACAC...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCAAGATGAATCGCTCTTaGGCAGGCACCTACCTGCTT +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPKMNRS*AGTYLL
Trigger: AAGCAGGTAGGTGCCTGCCCAAGAGCGATTCATCTT...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCCGCTGTGTGTGGGGTTaGTCTTTGGAAGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPRCVWG*SLEVMK
Trigger: CTTCATCACTTCCAAAGACCAACCCCACACACAGCG...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCGGGGTTCTGATAGCCTaGGTCTTTTTGCAGGGAACT +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPGVLIA*VFLQGT
Trigger: AGTTCCCTGCAAAAAGACCCAGGCTATCAGAACCCC...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCACGTTTTGGTGGAGATaGTGCTTGATGGCTTTGTGC +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPTFWWR*CLMALC
Trigger: GCACAAAGCCATCAAGCATCATCTCCACCAAAACGT...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAAGCAACACATGTAGATaGAGGAGCCTCAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPSNTCR*RSLNCS
Trigger: ACTGCAATTGAGGCTCCTTCATCTACATGTGTTGCT...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCAAGGTAAACTCAGCCTaGGGGTTTCTAAGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPKVNSA*GFLSPE
Trigger: TTCAGGGCTTAGAAACCCGCAGGCTGAGTTTACCTT...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCAAAGGCACTGTCATCTaGCCAGGAGATTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPKGTVI*PGDLRQ
Trigger: TTGCCTCAAATCTCCTGGGCAGATGACAGTGCCTTT...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATCCTCTGAGAACGTCTaGCTCCTTTGCAATATGTTT +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQSSENV*LLCNMF
Trigger: AAACATATTGCAAAGGAGCCAGACGTTCTCAGAGGA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCATTGCTTTTGCTTTGCTaGAAGGTAAACTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPLLLLC*KVNSAC
Trigger: GCAGGCTGAGTTTACCTTCCAGCAAAGCAAAAGCAA...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCAGCAACACATGTAGATaGAGGAGCCTCAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPSNTCR*RSLNCS
Trigger: ACTGCAATTGAGGCTCCTTCATCTACATGTGTTGCT...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCTCCAGCTCTGTTACCTaGACACTCAAAATACTCTGC +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPSSSVT*TLKILC
Trigger: GCAGAGTATTTTGAGTGTGCAGGTAACAGAGCTGGA...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000411486.7
ENST00000432087.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCGGACTGAAAGAGTTTTaGTGGGTGACACTGACTTTC +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPGLKEF*WVTLTF
Trigger: GAAAGTCAGTGTCACCCAGCAAAACTCTTTCAGTCC...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATCGAACTTCCATACTTaGTTTATCTGTAGACACTCC +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQSNFHT*FICRHS
Trigger: GGAGTGTCTACAGATAAAGCAAGTATGGAAGTTCGA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCATCCTCTGAGAACGTCTaGCTCCTTTGCAATATGTTT +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPSSENV*LLCNMF
Trigger: AAACATATTGCAAAGGAGCCAGACGTTCTCAGAGGA...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAACTTGGATCTAACTTATaGATTTGGGGTCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQLGSNL*IWGLLT
Trigger: AGTCAACAGACCCCAAATCCATAAGTTAGATCCAAG...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAGGATTTGGGGTCTGTTaGCTTCAAGAAAAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPGFGVC*LQEKLF
Trigger: AAAAAGCTTTTCTTGAAGTCAACAGACCCCAAATCC...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCCTGGAGTTCCAGTTTTaGATGATGAACGTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPLEFQF*MMNVLV
Trigger: CACCAAAACGTTCATCATGCAAAACTGGAACTCCAG...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR GCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCACATCTAATACGTTCTTaGAATCTCTTAATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPHLIRS*NLLMPL
Trigger: CAGGGGCATTAAGAGATTGCAAGAACGTATTAGATG...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATCTAACTTATGGATTTaGGGTCTGTTGACTTCAAGA +
Preference number: 4 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQSNLWI*GLLTSR
Trigger: TCTTGAAGTCAACAGACCCCAAATCCATAAGTTAGA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR TCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCACTATTTACTCCAGCATaGGTTTCACCAATGTATTCT +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPLFTPA*VSPMYS
Trigger: AGAATACATTGGTGAAACTCATGCTGGAGTAAATAG...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAAGCAGTATATCCACTTaGGTCAAGTATTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPSSIST*VKYFLL
Trigger: AAGAAGGAAATACTTGACCCAAGTGGATATACTGCT...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411486.7
ENST00000432087.5
CDS-3UTR CCA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCCTTGGATCTAACTTATaGATTTGGGGTCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPLGSNL*IWGLLT
Trigger: AGTCAACAGACCCCAAATCCATAAGTTAGATCCAAG...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CCA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAGATTATATGTTGCACTaGAGTCGAAGTAAATCAAGG +
Preference number: 4 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPDYMLH*SRSKSR
Trigger: CCTTGATTTACTTCGACTCCAGTGCAACATATAATC...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS GCA 90 bp CGCTGCATGCGCCTCTGGAAGCGGCGGCGACTGGCCCTGAGCTTCTaGAGCAGCTGGTCGTCTTCCACGTCCTCGCCCTCCATGGCGCGC +
Preference number: 5 (lower is better)
Translates to: RCMRLWKRRRLALSF*SSWSSSTSSPSMAR
Trigger: GCGCGCCATGGAGGGCGAGGACGTGGAAGACGACCAGCTGCTGCAGAAGCTCAGGGCCAGTCGCCGCCGCTTCCAGAGGCGCATGCAGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
CDS CCA 90 bp CGCCTCTGGAAGCGGCGGCGACTGGCCCTGAGCTTCTGCAGCAGCTaGTCGTCTTCCACGTCCTCGCCCTCCATGGCGCGCAGCGTACCC +
Preference number: 5 (lower is better)
Translates to: RLWKRRRLALSFCSS*SSSTSSPSMARSVP
Trigger: GGGTACGCTGCGCGCCATGGAGGGCGAGGACGTGGAAGACGACCAGCTGCTGCAGAAGCTCAGGGCCAGTCGCCGCCGCTTCCAGAGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
CDS-3UTR CAA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGGAGGCACCCAGGGAATaGCCCTGGCGTCCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: HEESQALWLQERLGPPGLEAPRE*PWRPEP
Trigger: GGGCTCCGGACGCCAGGGCAATTCCCTGGGTGCCTC...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS TCA 90 bp CTATCAGCCGCTGCATGCGCCTCTGGAAGCGGCGGCGACTGGCCCTaGGCTTCTGCAGCAGCTGGTCGTCTTCCACGTCCTCGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LSAAACASGSGGDWP*ASAAAGRLPRPRPP
Trigger: TGGAGGGCGAGGACGTGGAAGACGACCAGCTGCTGCAGAAGCTCAGGGCCAGTCGCCGCCGCTTCCAGAGGCGCATGCAGCGGCTGATAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
CDS GCA 90 bp GGCTCCCAGGACTGTGCGGTGCGAGGGAAGCTCAGGACCCCAGGCTaGAGCTTGCACGGAGCCATCTGTCCTGTCCGCGGGCTTCATGGA +
Preference number: 5 (lower is better)
Translates to: GSQDCAVRGKLRTPG*SLHGAICPVRGLHG
Trigger: TCCATGAAGCCCGCGGACAGGACAGATGGCTCCGTGCAAGCTGCAGCCTGGGGTCCTGAGCTTCCCTCGCACCGCACAGTCCTGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411486.7
ENST00000453122.1
CDS-3UTR CAA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTGAGGCACCCAGGGAATaGCCCTGGCGTCCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: EESQALWLQERLGPPGLFEAPRE*PWRPEP
Trigger: GGGCTCCGGACGCCAGGGCAATTCCCTGGGTGCCTC...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS GCA 90 bp AGGACTGTGCGGTGCGAGGGAAGCTCAGGACCCCAGGCTGCAGCTTaGACGGAGCCATCTGTCCTGTCCGCGGGCTTCATGGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: RTVRCEGSSGPQAAA*TEPSVLSAGFMEES
Trigger: GGACTCCTCCATGAAGCCCGCGGACAGGACAGATGGCTCCGTGCAAGCTGCAGCCTGGGGTCCTGAGCTTCCCTCGCACCGCACAGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411486.7
ENST00000453122.1
CDS CCA 90 bp CCTGAAGGCCACCAGGACTCGCAGGACCCCCTCTGTACATGTTCATaGCCCAGGAGTCCGGGAGGCACATCCGGCGAGGCTGGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PEGHQDSQDPLCTCS*PRSPGGTSGEAGSW
Trigger: CCAGGAACCAGCCTCGCCGGATGTGCCTCCCGGACTCCTGGGCCATGAACATGTACAGAGGGGGTCCTGCGAGTCCTGGTGGCCTTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTGGTCAGCGTGGCCATTaGCACCACCGGGGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: EESQALWLQERLGPPGLFGQRGH*HHRGVL
Trigger: GAGGACACCCCGGTGGTGCAAATGGCCACGCTGACC...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCCCGGTCTGACGGTGTaGTCCACCCCATCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: HEESQALWLQERLGPPGLPGLTV*STPSEA
Trigger: TGCCTCAGATGGGGTGGACAACACCGTCAGACCGGG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS CCA 90 bp TCGAAGGGCTGGTTGTACTTCTCTATCAGCCGCTGCATGCGCCTCTaGAAGCGGCGGCGACTGGCCCTGAGCTTCTGCAGCAGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: SKGWLYFSISRCMRL*KRRRLALSFCSSWS
Trigger: CGACCAGCTGCTGCAGAAGCTCAGGGCCAGTCGCCGCCGCTTCCAGAGGCGCATGCAGCGGCTGATAGAGAAGTACAACCAGCCCTTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
ENST00000454020.1
CDS-3UTR CAA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCCCGGTCTGACGGTGTaGTCCACCCCATCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: EESQALWLQERLGPPGLFPGLTV*STPSEA
Trigger: TGCCTCAGATGGGGTGGACAACACCGTCAGACCGGG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS CCA 90 bp CCAGGGAATTGCCCTGGCGTCCGGAGCCCTGGGGTTCTGATAGCCTaGGTCTTTTTGCAGGGAACTGATGGTCCCTCGTGCCATCCCTCG +
Preference number: 5 (lower is better)
Translates to: PGNCPGVRSPGVLIA*VFLQGTDGPSCHPS
Trigger: CGAGGGATGGCACGAGGGACCATCAGTTCCCTGCAAAAAGACCCAGGCTATCAGAACCCCAGGGCTCCGGACGCCAGGGCAATTCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGGAAGATGAATCGCTCTaGGGCAGGCACCTACCTGCT +
Preference number: 5 (lower is better)
Translates to: HEESQALWLQERLGPPGLEDESL*GRHLPA
Trigger: AGCAGGTAGGTGCCTGCCCAAGAGCGATTCATCTTC...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CTAGCTTTGTGTCTTCACTCGGAGTTCATCCACACGCATGCTGACAGCGTGCCTGAGGCACCCAGGGAATaGCCCTGGCGTCCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: LALCLHSEFIHTHADSVPEAPRE*PWRPEP
Trigger: GGGCTCCGGACGCCAGGGCAATTCCCTGGGTGCCTC...AGGCACGCTGTCAGCATGCGTGTGGATGAACTCCGAGTGAAGACACAAAGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433484.2
CDS TCA 90 bp TCTCTTCTGAGTTGGGCTGTGAAGAGCTGCCCTGGTCTCCCGGTCTaGCGGTGTTGTCCACCCCATCTGAGGCACCCAGGGAATTGCCCT +
Preference number: 5 (lower is better)
Translates to: SLLSWAVKSCPGLPV*RCCPPHLRHPGNCP
Trigger: AGGGCAATTCCCTGGGTGCCTCAGATGGGGTGGACAACACCGTCAGACCGGGAGACCAGGGCAGCTCTTCACAGCCCAACTCAGAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS-3UTR CAA 90 bp CGGCAGGTGAGGCCAGTGAAGGCAGCGGAGTCACACGTACATCCCTTCCAGCTCTCCTCGAAGGGCTGGTaGTACTTCTCTATCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RQVRPVKAAESHVHPFQLSSKGW*YFSISR
Trigger: GCGGCTGATAGAGAAGTACAACCAGCCCTTCGAGGA...GAGCTGGAAGGGATGTACGTGTGACTCCGCTGCCTTCACTGGCCTCACCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CAA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTCGAGGGTGTCACTTaGCGCTCCTTCCAACTTGGA +
Preference number: 5 (lower is better)
Translates to: HEESQALWLQERLGPPGLFEGVT*RSFQLG
Trigger: TCCAAGTTGGAAGGAGCGCAAAGTGACACCCTCGAA...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS TCA 90 bp CCGGAGCCCTGGGGTTCTGATAGCCTGGGTCTTTTTGCAGGGAACTaGTGGTCCCTCGTGCCATCCCTCGTGATGGCACGAGCAACACAT +
Preference number: 5 (lower is better)
Translates to: PEPWGSDSLGLFAGN*WSLVPSLVMARATH
Trigger: ATGTGTTGCTCGTGCCATCACGAGGGATGGCACGAGGGACCATCAGTTCCCTGCAAAAAGACCCAGGCTATCAGAACCCCAGGGCTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGATGAAGGAGCCTCAATaGCAGTTGAGCCCAGTAGAC +
Preference number: 5 (lower is better)
Translates to: HEESQALWLQERLGPPGLMKEPQ*QLSPVD
Trigger: GTCTACTGGGCTCAACTGCAATTGAGGCTCCTTCAT...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CGGCAGGTGAGGCCAGTGAAGGCAGCGGAGTCACACGTACATCCCTTCCAGCTCATTTTTCAAAGGGCTTaGAGGCACTGCAGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: RQVRPVKAAESHVHPFQLIFQRA*RHCRRL
Trigger: GAGCCGCCTGCAGTGCCTCAAAGCCCTTTGAAAAAT...GAGCTGGAAGGGATGTACGTGTGACTCCGCTGCCTTCACTGGCCTCACCTGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS CCA 90 bp TTCCACCCCAAATTCTCAATCCCTGTGGCGTCTCGTAGGTCAGCGTaGCCATTTGCACCACCGGGGTGTCCTCGAAGGGCTGGTTGTACT +
Preference number: 5 (lower is better)
Translates to: FHPKFSIPVASRRSA*PFAPPGCPRRAGCT
Trigger: AGTACAACCAGCCCTTCGAGGACACCCCGGTGGTGCAAATGGCCACGCTGACCTACGAGACGCCACAGGGATTGAGAATTTGGGGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
ENST00000454020.1
CDS CCA 90 bp CTGCAGGTGCTAAGGCCCAAGCAACTGACTCTTCCTGGTCTGACGTaGCATCGACCTCACCGCTTTTTGAATCGGCTCCCAGGACTGTGC +
Preference number: 5 (lower is better)
Translates to: LQVLRPKQLTLPGLT*HRPHRFLNRLPGLC
Trigger: GCACAGTCCTGGGAGCCGATTCAAAAAGCGGTGAGGTCGATGCCACGTCAGACCAGGAAGAGTCAGTTGCTTGGGCCTTAGCACCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS CCA 90 bp TCATGGCCCAGGAGTCCGGGAGGCACATCCGGCGAGGCTGGTTCCTaGGACTCAGGCAATATTCCCGATGAAGCTGATCAAATCGGATTT +
Preference number: 5 (lower is better)
Translates to: SWPRSPGGTSGEAGS*DSGNIPDEADQIGF
Trigger: AAATCCGATTTGATCAGCTTCATCGGGAATATTGCCTGAGTCCCAGGAACCAGCCTCGCCGGATGTGCCTCCCGGACTCCTGGGCCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CCA 90 bp GAAGGTCAGATGTCTGCTGCGGGCGAGTTGCGCTGTGTGTGGGGTTaGTCTTTGGAAGTGATGAAGATGAATCGCTCTTGGGCAGGCACC +
Preference number: 5 (lower is better)
Translates to: EGQMSAAGELRCVWG*SLEVMKMNRSWAGT
Trigger: GGTGCCTGCCCAAGAGCGATTCATCTTCATCACTTCCAAAGACCAACCCCACACACAGCGCAACTCGCCCGCAGCAGACATCTGACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCATGGCCCTGTCGTATaGTTGGTCTGGAAACTATTT +
Preference number: 5 (lower is better)
Translates to: HEESQALWLQERLGPPGLHGPVV*LVWKLF
Trigger: AAATAGTTTCCAGACCAACAATACGACAGGGCCATG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGGTGTGGGGTTGGTCTTaGGAAGTGATGAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: HEESQALWLQERLGPPGLVWGWS*EVMKMN
Trigger: ATTCATCTTCATCACTTCCAAAGACCAACCCCACAC...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTGAGCCTCAATTGCAGTaGAGCCCAGTAGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: EESQALWLQERLGPPGLFEPQLQ*SPVDFF
Trigger: GAAAAAGTCTACTGGGCTCAACTGCAATTGAGGCTC...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TACGTTTGTCTGACAGCCCACTGGCCCAAAGGGTCGGAAACTAGCTTTGTGTCTCCCGGTCTGACGGTGTaGTCCACCCCATCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: YVCLTAHWPKGSETSFVSPGLTV*STPSEA
Trigger: TGCCTCAGATGGGGTGGACAACACCGTCAGACCGGG...AGACACAAAGCTAGTTTCCGACCCTTTGGGCCAGTGGGCTGTCAGACAAACGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433484.2
CDS-3UTR CAA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTCATGGCCCTGTCGTATaGTTGGTCTGGAAACTATTT +
Preference number: 5 (lower is better)
Translates to: EESQALWLQERLGPPGLFHGPVV*LVWKLF
Trigger: AAATAGTTTCCAGACCAACAATACGACAGGGCCATG...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS TCA 90 bp TTTGCTTTGCTGGAAGGTAAACTCAGCCTGCGGGTTTCTAAGCCCTaGAGGCCACCAGGACTCGCAGGACCCCCTCTGTACATGTTCATG +
Preference number: 5 (lower is better)
Translates to: FALLEGKLSLRVSKP*RPPGLAGPPLYMFM
Trigger: CATGAACATGTACAGAGGGGGTCCTGCGAGTCCTGGTGGCCTTCAGGGCTTAGAAACCCGCAGGCTGAGTTTACCTTCCAGCAAAGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CCA 90 bp GAACGTGAAGGTCAGATGTCTGCTGCGGGCGAGTTGCGCTGTGTGTaGGGTTGGTCTTTGGAAGTGATGAAGATGAATCGCTCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: EREGQMSAAGELRCV*GWSLEVMKMNRSWA
Trigger: TGCCCAAGAGCGATTCATCTTCATCACTTCCAAAGACCAACCCCACACACAGCGCAACTCGCCCGCAGCAGACATCTGACCTTCACGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGTCACACGTACATCCCTTCCAGCTCTGTTACCTGCACACTCAAAATACTCTGACCCCAGGCTGCAGCTaGCACGGAGCCATCTGTCCT +
Preference number: 5 (lower is better)
Translates to: ESHVHPFQLCYLHTQNTLTPGCS*HGAICP
Trigger: AGGACAGATGGCTCCGTGCAAGCTGCAGCCTGGGGT...CAGAGTATTTTGAGTGTGCAGGTAACAGAGCTGGAAGGGATGTACGTGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453122.1
CDS-3UTR CAA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGCGACCTCACCGCTTTTaGAATCGGCTCCCAGGACTG +
Preference number: 5 (lower is better)
Translates to: PVINSFSKNHEESQALWLRPHRF*NRLPGL
Trigger: CAGTCCTGGGAGCCGATTCAAAAAGCGGTGAGGTCG...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS-3UTR CAA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTCACTGATGGTCACATaGCAAATGTCATCATCTTCA +
Preference number: 5 (lower is better)
Translates to: HEESQALWLQERLGPPGLSLMVT*QMSSSS
Trigger: TGAAGATGATGACATTTGCAATGTGACCATCAGTGA...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTTGCATGATGAACGTTTaGGTGGAGATGATGCTTGAT +
Preference number: 5 (lower is better)
Translates to: EESQALWLQERLGPPGLFCMMNV*VEMMLD
Trigger: ATCAAGCATCATCTCCACCAAAACGTTCATCATGCA...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGACATCTAATACGTTCTaGCAATCTCTTAATGCCCCT +
Preference number: 5 (lower is better)
Translates to: HEESQALWLQERLGPPGLTSNTF*QSLNAP
Trigger: AGGGGCATTAAGAGATTGCAAGAACGTATTAGATGT...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTTGCGCTCCTTCCAACTaGGATCTAACTTATGGATTT +
Preference number: 5 (lower is better)
Translates to: EESQALWLQERLGPPGLFCAPSN*DLTYGF
Trigger: AAATCCATAAGTTAGATCCAAGTTGGAAGGAGCGCA...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCATCTGCTGCGGGCGAGTaGCGCTGTGTGTGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: YFPSRVIACRARTYVSQASAAGE*RCVWGW
Trigger: CCAACCCCACACACAGCGCAACTCGCCCGCAGCAGA...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS TCA 90 bp TCAACAGCCGGCTCATGGAGTGCAGCATCCCTGCGTACAGGTCACTaGTGGTCACATTGCAAATGTCATCATCTTCAAAGGGCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: STAGSWSAASLRTGH*WSHCKCHHLQRAGC
Trigger: GCAGCCAGCCCTTTGAAGATGATGACATTTGCAATGTGACCATCAGTGACCTGTACGCAGGGATGCTGCACTCCATGAGCCGGCTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000434039.1
ENST00000441687.5
ENST00000454020.1
CDS CCA 90 bp CTGCAGGTGCTAAGGCCCAAGCAACTGACTCTTCCTGGTCTGACGTaGCATCGACCTCACCGCTTTTTGAATCTGGATCTCTCCTTCGTT +
Preference number: 5 (lower is better)
Translates to: LQVLRPKQLTLPGLT*HRPHRFLNLDLSFV
Trigger: AACGAAGGAGAGATCCAGATTCAAAAAGCGGTGAGGTCGATGCCACGTCAGACCAGGAAGAGTCAGTTGCTTGGGCCTTAGCACCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454020.1
CDS-3UTR CAA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTCCTCGAAGGGCTGGTaGTACTTCTCTATCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PVINSFSKNHEESQALWLSSKGW*YFSISR
Trigger: GCGGCTGATAGAGAAGTACAACCAGCCCTTCGAGGA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAACCCCAGGCTGCAGCTaGCACGGAGCCATCTGTCCT +
Preference number: 5 (lower is better)
Translates to: YFPSRVIACRARTYVSQATPGCS*HGAICP
Trigger: AGGACAGATGGCTCCGTGCAAGCTGCAGCCTGGGGT...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS-3UTR CAA 90 bp GAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGTTTTCACTGATGGTCACATaGCAAATGTCATCATCTTCA +
Preference number: 5 (lower is better)
Translates to: EESQALWLQERLGPPGLFSLMVT*QMSSSS
Trigger: TGAAGATGATGACATTTGCAATGTGACCATCAGTGA...AAACAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CATGAGGAGTCACAGGCGCTGTGGCTGCAGGAGCGTCTGGGACCACCAGGACTGCATCAAGATTATATGTaGCACTGGAGTCGAAGTAAA +
Preference number: 5 (lower is better)
Translates to: HEESQALWLQERLGPPGLHQDYM*HWSRSK
Trigger: TTTACTTCGACTCCAGTGCAACATATAATCTTGATG...CAGTCCTGGTGGTCCCAGACGCTCCTGCAGCCACAGCGCCTGTGACTCCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS GCA 90 bp GAGATGATGCTTGATGGCTTTGTGCTCAACAGCCGGCTCATGGAGTaGAGCATCCCTGCGTACAGGTCACTGATGGTCACATTGCAAATG +
Preference number: 5 (lower is better)
Translates to: EMMLDGFVLNSRLME*SIPAYRSLMVTLQM
Trigger: CATTTGCAATGTGACCATCAGTGACCTGTACGCAGGGATGCTGCACTCCATGAGCCGGCTGTTGAGCACAAAGCCATCAAGCATCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000434039.1
ENST00000441687.5
ENST00000454020.1
CDS-3UTR CAA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAAGAGGCACCCAGGGAATaGCCCTGGCGTCCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQEAPRE*PWRPEP
Trigger: GGGCTCCGGACGCCAGGGCAATTCCCTGGGTGCCTC...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS-3UTR CAA 90 bp GGTCGGAAACTAGCTTTGTGTCTTCACTCGGAGTTCATCCACACGCATGCTGACGGTCGGAAACTAGCTTaGTGTCTTCACTCGGAGTTC +
Preference number: 5 (lower is better)
Translates to: GRKLALCLHSEFIHTHADGRKLA*CLHSEF
Trigger: GAACTCCGAGTGAAGACACAAAGCTAGTTTCCGACC...GTCAGCATGCGTGTGGATGAACTCCGAGTGAAGACACAAAGCTAGTTTCCGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433484.2
CDS-3UTR CAA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAGAAGATGAATCGCTCTaGGGCAGGCACCTACCTGCT +
Preference number: 5 (lower is better)
Translates to: YFPSRVIACRARTYVSQAEDESL*GRHLPA
Trigger: AGCAGGTAGGTGCCTGCCCAAGAGCGATTCATCTTC...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATCTGCTGCGGGCGAGTaGCGCTGTGTGTGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQSAAGE*RCVWGW
Trigger: CCAACCCCACACACAGCGCAACTCGCCCGCAGCAGA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS TCA 90 bp TTCACAGGCTCAGAGCAGGGTATGAAGTTCTCCTTGGAGCTCCTCTaGGAACGTCTGGCTCCTTTGCAATATGTTTTGTTCATCCTGCTC +
Preference number: 5 (lower is better)
Translates to: FTGSEQGMKFSLELL*ERLAPLQYVLFILL
Trigger: GAGCAGGATGAACAAAACATATTGCAAAGGAGCCAGACGTTCTCAGAGGAGCTCCAAGGAGAACTTCATACCCTGCTCTGAGCCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CCA 90 bp AGGTCACTGATGGTCACATTGCAAATGTCATCATCTTCAAAGGGCTaGCTGCTTAAGAAGCTGCTGCTACTGGTCTCTTGTAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RSLMVTLQMSSSSKG*LLKKLLLLVSCRER
Trigger: CCTCTCCCTACAAGAGACCAGTAGCAGCAGCTTCTTAAGCAGCCAGCCCTTTGAAGATGATGACATTTGCAATGTGACCATCAGTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000434039.1
ENST00000441687.5
ENST00000454020.1
CDS CCA 90 bp TGTGTGTGGGGTTGGTCTTTGGAAGTGATGAAGATGAATCGCTCTTaGGCAGGCACCTACCTGCTTCCAGAGATCTTTTGCCTAGGTTTT +
Preference number: 5 (lower is better)
Translates to: CVWGWSLEVMKMNRS*AGTYLLPEIFCLGF
Trigger: AAAACCTAGGCAAAAGATCTCTGGAAGCAGGTAGGTGCCTGCCCAAGAGCGATTCATCTTCATCACTTCCAAAGACCAACCCCACACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGGCTTCCAGAGATCTTTaGCCTAGGTTTTCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: PVINSFSKNHEESQALWLASRDL*PRFSKA
Trigger: GGCTTTTGAAAACCTAGGCAAAAGATCTCTGGAAGC...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGGTGTGGGGTTGGTCTTaGGAAGTGATGAAGATGAAT +
Preference number: 5 (lower is better)
Translates to: PVINSFSKNHEESQALWLVWGWS*EVMKMN
Trigger: ATTCATCTTCATCACTTCCAAAGACCAACCCCACAC...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAATAGCCTGGGTCTTTTaGCAGGGAACTGATGGTCCC +
Preference number: 5 (lower is better)
Translates to: YFPSRVIACRARTYVSQAIAWVF*QGTDGP
Trigger: GGGACCATCAGTTCCCTGCAAAAAGACCCAGGCTAT...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCGGTCAGCGTGGCCATTaGCACCACCGGGGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPGQRGH*HHRGVL
Trigger: GAGGACACCCCGGTGGTGCAAATGGCCACGCTGACC...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGGAACGTCTGGCTCCTTaGCAATATGTTTTGTTCATC +
Preference number: 5 (lower is better)
Translates to: PVINSFSKNHEESQALWLERLAP*QYVLFI
Trigger: GATGAACAAAACATATTGCAAAGGAGCCAGACGTTC...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CCTGTCATCAACAGCTTCAGTAAGAATCATGAGGAGTCACAGGCGCTGTGGCTGTGCGCTCCTTCCAACTaGGATCTAACTTATGGATTT +
Preference number: 5 (lower is better)
Translates to: PVINSFSKNHEESQALWLCAPSN*DLTYGF
Trigger: AAATCCATAAGTTAGATCCAAGTTGGAAGGAGCGCA...CAGCCACAGCGCCTGTGACTCCTCATGATTCTTACTGAAGCTGTTGATGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCATTCCTTCAAGGGTCATaGCATGCAGGGCTCGAACTT +
Preference number: 5 (lower is better)
Translates to: YFPSRVIACRARTYVSQAFLQGS*HAGLEL
Trigger: AAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAA...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAGAGCCTCAATTGCAGTaGAGCCCAGTAGACTTTTTC +
Preference number: 5 (lower is better)
Translates to: YFPSRVIACRARTYVSQAEPQLQ*SPVDFF
Trigger: GAAAAAGTCTACTGGGCTCAACTGCAATTGAGGCTC...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS GCA 90 bp TTCATCCTGCTCTTATATCTGTGCCTCCTCCTGGAGTTCCAGTTTTaGATGATGAACGTTTTGGTGGAGATGATGCTTGATGGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: FILLLYLCLLLEFQF*MMNVLVEMMLDGFV
Trigger: CACAAAGCCATCAAGCATCATCTCCACCAAAACGTTCATCATGCAAAACTGGAACTCCAGGAGGAGGCACAGATATAAGAGCAGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000454020.1
CDS-3UTR CAA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATCCTCGAAGGGCTGGTaGTACTTCTCTATCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQSSKGW*YFSISR
Trigger: GCGGCTGATAGAGAAGTACAACCAGCCCTTCGAGGA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCACATGGCCCTGTCGTATaGTTGGTCTGGAAACTATTT +
Preference number: 5 (lower is better)
Translates to: YFPSRVIACRARTYVSQAHGPVV*LVWKLF
Trigger: AAATAGTTTCCAGACCAACAATACGACAGGGCCATG...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS GCA 90 bp TGGAGTCGAAGTAAATCAAGGAAGAATACTTCGAGGGTGTCACTTTaGGCTCCTTCCAACTTGGATCTAACTTATGGATTTGGGGTCTGT +
Preference number: 5 (lower is better)
Translates to: WSRSKSRKNTSRVSL*APSNLDLTYGFGVC
Trigger: ACAGACCCCAAATCCATAAGTTAGATCCAAGTTGGAAGGAGCGCAAAGTGACACCCTCGAAGTATTCTTCCTTGATTTACTTCGACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAGAACGTCTGGCTCCTTaGCAATATGTTTTGTTCATC +
Preference number: 5 (lower is better)
Translates to: YFPSRVIACRARTYVSQAERLAP*QYVLFI
Trigger: GATGAACAAAACATATTGCAAAGGAGCCAGACGTTC...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCATCACTGATGGTCACATaGCAAATGTCATCATCTTCA +
Preference number: 5 (lower is better)
Translates to: YFPSRVIACRARTYVSQASLMVT*QMSSSS
Trigger: TGAAGATGATGACATTTGCAATGTGACCATCAGTGA...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TATTTTCCTTCAAGGGTCATTGCATGCAGGGCTCGAACTTACGTCTCACAAGCAACATCTAATACGTTCTaGCAATCTCTTAATGCCCCT +
Preference number: 5 (lower is better)
Translates to: YFPSRVIACRARTYVSQATSNTF*QSLNAP
Trigger: AGGGGCATTAAGAGATTGCAAGAACGTATTAGATGT...TGCTTGTGAGACGTAAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCATTCGAGGGTGTCACTTaGCGCTCCTTCCAACTTGGA +
Preference number: 5 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPFEGVT*RSFQLG
Trigger: TCCAAGTTGGAAGGAGCGCAAAGTGACACCCTCGAA...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCGAAGATGAATCGCTCTaGGGCAGGCACCTACCTGCT +
Preference number: 5 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPEDESL*GRHLPA
Trigger: AGCAGGTAGGTGCCTGCCCAAGAGCGATTCATCTTC...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAATTCCTTCAAGGGTCATaGCATGCAGGGCTCGAACTT +
Preference number: 5 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQFLQGS*HAGLEL
Trigger: AAGTTCGAGCCCTGCATGCAATGACCCTTGAAGGAA...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAAGAGGCAAAGGGAACTTaGGCCTTAATGAGCCACTTC +
Preference number: 5 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQEAKGT*ALMSHF
Trigger: GAAGTGGCTCATTAAGGCCAAAGTTCCCTTTGCCTC...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433484.2
CDS-3UTR CAA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCTTCGAGGGTGTCACTTaGCGCTCCTTCCAACTTGGA +
Preference number: 5 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPFEGVT*RSFQLG
Trigger: TCCAAGTTGGAAGGAGCGCAAAGTGACACCCTCGAA...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAAGGGACTGAAAGAGTTTaGCTGGGTGACACTGACTTT +
Preference number: 5 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQGTERV*LGDTDF
Trigger: AAAGTCAGTGTCACCCAGCAAAACTCTTTCAGTCCC...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCATAGCCTGGGTCTTTTaGCAGGGAACTGATGGTCCC +
Preference number: 5 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPIAWVF*QGTDGP
Trigger: GGGACCATCAGTTCCCTGCAAAAAGACCCAGGCTAT...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAAATTTTTCAAAGGGCTTaGAGGCACTGCAGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQIFQRA*RHCRLD
Trigger: ATCCAGCCTGCAGTGCCTCAAAGCCCTTTGAAAAAT...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432087.5
CDS-3UTR CAA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAACCTGGAGTTCCAGTTTaGCATGATGAACGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQPGVPV*HDERFG
Trigger: ACCAAAACGTTCATCATGCAAAACTGGAACTCCAGG...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAGGGACTGAAAGAGTTTaGCTGGGTGACACTGACTTT +
Preference number: 5 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPGTERV*LGDTDF
Trigger: AAAGTCAGTGTCACCCAGCAAAACTCTTTCAGTCCC...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCATGAAGGAGCCTCAATaGCAGTTGAGCCCAGTAGAC +
Preference number: 5 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPMKEPQ*QLSPVD
Trigger: GTCTACTGGGCTCAACTGCAATTGAGGCTCCTTCAT...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCACCTGGAGTTCCAGTTTaGCATGATGAACGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPPGVPV*HDERFG
Trigger: ACCAAAACGTTCATCATGCAAAACTGGAACTCCAGG...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAAGAACGTCTGGCTCCTTaGCAATATGTTTTGTTCATC +
Preference number: 5 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQERLAP*QYVLFI
Trigger: GATGAACAAAACATATTGCAAAGGAGCCAGACGTTC...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCATGCATGATGAACGTTTaGGTGGAGATGATGCTTGAT +
Preference number: 5 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPCMMNV*VEMMLD
Trigger: ATCAAGCATCATCTCCACCAAAACGTTCATCATGCA...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCCCTGGAGTTCCAGTTTaGCATGATGAACGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPPGVPV*HDERFG
Trigger: ACCAAAACGTTCATCATGCAAAACTGGAACTCCAGG...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCGCTTCCAGAGATCTTTaGCCTAGGTTTTCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPASRDL*PRFSKA
Trigger: GGCTTTTGAAAACCTAGGCAAAAGATCTCTGGAAGC...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCTGCATGATGAACGTTTaGGTGGAGATGATGCTTGAT +
Preference number: 5 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPCMMNV*VEMMLD
Trigger: ATCAAGCATCATCTCCACCAAAACGTTCATCATGCA...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp CTTTATTCACATAATTTCTACACCAAGAACTCGAGGTTATCTCTGATGGAACCAACATCTAATACGTTCTaGCAATCTCTTAATGCCCCT +
Preference number: 5 (lower is better)
Translates to: LYSHNFYTKNSRLSLMEPTSNTF*QSLNAP
Trigger: AGGGGCATTAAGAGATTGCAAGAACGTATTAGATGT...TGGTTCCATCAGAGATAACCTCGAGTTCTTGGTGTAGAAATTATGTGAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp TCACTAATATTTACTTTAAGGGCAGAGAAGTCAACCAAGTCCTCACAGTCTCAACATCAAGATTATATGTaGCACTGGAGTCGAAGTAAA +
Preference number: 5 (lower is better)
Translates to: SLIFTLRAEKSTKSSQSQHQDYM*HWSRSK
Trigger: TTTACTTCGACTCCAGTGCAACATATAATCTTGATG...TTGAGACTGTGAGGACTTGGTTGACTTCTCTGCCCTTAAAGTAAATATTAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS-3UTR CAA 90 bp GAGAGACTGTCTCAAAAACAAACAAACAAACAAACAAACAAACAAATAACCCCCCATCAAGATTATATGTaGCACTGGAGTCGAAGTAAA +
Preference number: 5 (lower is better)
Translates to: ERLSQKQTNKQTNKQITPHQDYM*HWSRSK
Trigger: TTTACTTCGACTCCAGTGCAACATATAATCTTGATG...GGGGGTTATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGAGACAGTCTCTC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS GCA 72 bp CGCCTCTGGAAGCGGCGGCGACTGGCCCTGAGCTTCTaGAGCAGCTGGTCGTCTTCCACGTCCTCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: RLWKRRRLALSF*SSWSSSTSSPS
Trigger: GGAGGGCGAGGACGTGGAAGACGACCAGCTGCTGCAGAAGCTCAGGGCCAGTCGCCGCCGCTTCCAGAGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
CDS GCA 72 bp GACTGTGCGGTGCGAGGGAAGCTCAGGACCCCAGGCTaGAGCTTGCACGGAGCCATCTGTCCTGTCCGCGGG +
Preference number: 6 (lower is better)
Translates to: DCAVRGKLRTPG*SLHGAICPVRG
Trigger: CCCGCGGACAGGACAGATGGCTCCGTGCAAGCTGCAGCCTGGGGTCCTGAGCTTCCCTCGCACCGCACAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411486.7
ENST00000453122.1
CDS CCA 72 bp GCAGCAGCTGGTCGTCTTCCACGTCCTCGCCCTCCATaGCGCGCAGCGTACCCAGCATCGGACCCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: AAAGRLPRPRPP*RAAYPASDPAS
Trigger: ACTGGCTGGGTCCGATGCTGGGTACGCTGCGCGCCATGGAGGGCGAGGACGTGGAAGACGACCAGCTGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
CDS TCA 72 bp GCTGCATGCGCCTCTGGAAGCGGCGGCGACTGGCCCTaGGCTTCTGCAGCAGCTGGTCGTCTTCCACGTCCT +
Preference number: 6 (lower is better)
Translates to: AACASGSGGDWP*ASAAAGRLPRP
Trigger: AGGACGTGGAAGACGACCAGCTGCTGCAGAAGCTCAGGGCCAGTCGCCGCCGCTTCCAGAGGCGCATGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
ENST00000454020.1
CDS CAA 72 bp GCGGTGCGAGGGAAGCTCAGGACCCCAGGCTGCAGCTaGCACGGAGCCATCTGTCCTGTCCGCGGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: AVRGKLRTPGCS*HGAICPVRGLH
Trigger: ATGAAGCCCGCGGACAGGACAGATGGCTCCGTGCAAGCTGCAGCCTGGGGTCCTGAGCTTCCCTCGCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411486.7
ENST00000453122.1
CDS CAA 90 bp CAGGACTGTGCGGTGCGAGGGAAGCTCAGGACCCCAGGCTGCAGCTaGCACGGAGCCATCTGTCCTGTCCGCGGGCTTCATGGAGGAGTC +
Preference number: 6 (lower is better)
Translates to: QDCAVRGKLRTPGCS*HGAICPVRGLHGGV
Trigger: GACTCCTCCATGAAGCCCGCGGACAGGACAGATGGCTCCGTGCAAGCTGCAGCCTGGGGTCCTGAGCTTCCCTCGCACCGCACAGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411486.7
ENST00000453122.1
CDS GCA 72 bp CGGTGTTGTCCACCCCATCTGAGGCACCCAGGGAATTaGCCTGGCGTCCGGAGCCCTGGGGTTCTGATAGCC +
Preference number: 6 (lower is better)
Translates to: RCCPPHLRHPGN*PGVRSPGVLIA
Trigger: GGCTATCAGAACCCCAGGGCTCCGGACGCCAGGGCAATTCCCTGGGTGCCTCAGATGGGGTGGACAACACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS CCA 72 bp CACCAGGACTCGCAGGACCCCCTCTGTACATGTTCATaGCCCAGGAGTCCGGGAGGCACATCCGGCGAGGCT +
Preference number: 6 (lower is better)
Translates to: HQDSQDPLCTCS*PRSPGGTSGEA
Trigger: AGCCTCGCCGGATGTGCCTCCCGGACTCCTGGGCCATGAACATGTACAGAGGGGGTCCTGCGAGTCCTGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CAA 90 bp CCCGGTCTGACGGTGTTGTCCACCCCATCTGAGGCACCCAGGGAATaGCCCTGGCGTCCGGAGCCCTGGGGTTCTGATAGCCTGGGTCTT +
Preference number: 6 (lower is better)
Translates to: PGLTVLSTPSEAPRE*PWRPEPWGSDSLGL
Trigger: AAGACCCAGGCTATCAGAACCCCAGGGCTCCGGACGCCAGGGCAATTCCCTGGGTGCCTCAGATGGGGTGGACAACACCGTCAGACCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS CAA 90 bp GAGTTGGGCTGTGAAGAGCTGCCCTGGTCTCCCGGTCTGACGGTGTaGTCCACCCCATCTGAGGCACCCAGGGAATTGCCCTGGCGTCCG +
Preference number: 6 (lower is better)
Translates to: ELGCEELPWSPGLTV*STPSEAPRELPWRP
Trigger: CGGACGCCAGGGCAATTCCCTGGGTGCCTCAGATGGGGTGGACAACACCGTCAGACCGGGAGACCAGGGCAGCTCTTCACAGCCCAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS TCA 72 bp AGTTGGGCTGTGAAGAGCTGCCCTGGTCTCCCGGTCTaGCGGTGTTGTCCACCCCATCTGAGGCACCCAGGG +
Preference number: 6 (lower is better)
Translates to: SWAVKSCPGLPV*RCCPPHLRHPG
Trigger: CCCTGGGTGCCTCAGATGGGGTGGACAACACCGTCAGACCGGGAGACCAGGGCAGCTCTTCACAGCCCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS GCA 72 bp TCCTCGAAGGGCTGGTTGTACTTCTCTATCAGCCGCTaGATGCGCCTCTGGAAGCGGCGGCGACTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: SSKGWLYFSISR*MRLWKRRRLAL
Trigger: CAGGGCCAGTCGCCGCCGCTTCCAGAGGCGCATGCAGCGGCTGATAGAGAAGTACAACCAGCCCTTCGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
ENST00000454020.1
CDS GCA 72 bp CGACCTCACCGCTTTTTGAATCGGCTCCCAGGACTGTaGGGTGCGAGGGAAGCTCAGGACCCCAGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: RPHRFLNRLPGL*GAREAQDPRLQ
Trigger: CTGCAGCCTGGGGTCCTGAGCTTCCCTCGCACCGCACAGTCCTGGGAGCCGATTCAAAAAGCGGTGAGGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS CCA 72 bp TTGTCCACCCCATCTGAGGCACCCAGGGAATTGCCCTaGCGTCCGGAGCCCTGGGGTTCTGATAGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: LSTPSEAPRELP*RPEPWGSDSLG
Trigger: ACCCAGGCTATCAGAACCCCAGGGCTCCGGACGCCAGGGCAATTCCCTGGGTGCCTCAGATGGGGTGGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS CCA 72 bp TGGTTGTACTTCTCTATCAGCCGCTGCATGCGCCTCTaGAAGCGGCGGCGACTGGCCCTGAGCTTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: WLYFSISRCMRL*KRRRLALSFCS
Trigger: GCTGCAGAAGCTCAGGGCCAGTCGCCGCCGCTTCCAGAGGCGCATGCAGCGGCTGATAGAGAAGTACAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
ENST00000454020.1
CDS CCA 72 bp TGCCCTGGCGTCCGGAGCCCTGGGGTTCTGATAGCCTaGGTCTTTTTGCAGGGAACTGATGGTCCCTCGTGC +
Preference number: 6 (lower is better)
Translates to: CPGVRSPGVLIA*VFLQGTDGPSC
Trigger: GCACGAGGGACCATCAGTTCCCTGCAAAAAGACCCAGGCTATCAGAACCCCAGGGCTCCGGACGCCAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS CCA 72 bp GAGGCACCCAGGGAATTGCCCTGGCGTCCGGAGCCCTaGGGTTCTGATAGCCTGGGTCTTTTTGCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: EAPRELPWRPEP*GSDSLGLFAGN
Trigger: GTTCCCTGCAAAAAGACCCAGGCTATCAGAACCCCAGGGCTCCGGACGCCAGGGCAATTCCCTGGGTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS CAA 72 bp TGTGAAGAGCTGCCCTGGTCTCCCGGTCTGACGGTGTaGTCCACCCCATCTGAGGCACCCAGGGAATTGCCC +
Preference number: 6 (lower is better)
Translates to: CEELPWSPGLTV*STPSEAPRELP
Trigger: GGGCAATTCCCTGGGTGCCTCAGATGGGGTGGACAACACCGTCAGACCGGGAGACCAGGGCAGCTCTTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000433484.2
ENST00000441687.5
CDS CAA 72 bp CAATCCCTGTGGCGTCTCGTAGGTCAGCGTGGCCATTaGCACCACCGGGGTGTCCTCGAAGGGCTGGTTGTA +
Preference number: 6 (lower is better)
Translates to: QSLWRLVGQRGH*HHRGVLEGLVV
Trigger: TACAACCAGCCCTTCGAGGACACCCCGGTGGTGCAAATGGCCACGCTGACCTACGAGACGCCACAGGGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
ENST00000454020.1
CDS CAA 72 bp GTCCGGAGCCCTGGGGTTCTGATAGCCTGGGTCTTTTaGCAGGGAACTGATGGTCCCTCGTGCCATCCCTCG +
Preference number: 6 (lower is better)
Translates to: VRSPGVLIAWVF*QGTDGPSCHPS
Trigger: CGAGGGATGGCACGAGGGACCATCAGTTCCCTGCAAAAAGACCCAGGCTATCAGAACCCCAGGGCTCCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS CCA 72 bp AAATTCTCAATCCCTGTGGCGTCTCGTAGGTCAGCGTaGCCATTTGCACCACCGGGGTGTCCTCGAAGGGCT +
Preference number: 6 (lower is better)
Translates to: KFSIPVASRRSA*PFAPPGCPRRA
Trigger: AGCCCTTCGAGGACACCCCGGTGGTGCAAATGGCCACGCTGACCTACGAGACGCCACAGGGATTGAGAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
ENST00000454020.1
CDS CCA 72 bp AGGAGTCCGGGAGGCACATCCGGCGAGGCTGGTTCCTaGGACTCAGGCAATATTCCCGATGAAGCTGATCAA +
Preference number: 6 (lower is better)
Translates to: RSPGGTSGEAGS*DSGNIPDEADQ
Trigger: TTGATCAGCTTCATCGGGAATATTGCCTGAGTCCCAGGAACCAGCCTCGCCGGATGTGCCTCCCGGACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CAA 90 bp CAGATGTCTGCTGCGGGCGAGTTGCGCTGTGTGTGGGGTTGGTCTTaGGAAGTGATGAAGATGAATCGCTCTTGGGCAGGCACCTACCTG +
Preference number: 6 (lower is better)
Translates to: QMSAAGELRCVWGWS*EVMKMNRSWAGTYL
Trigger: CAGGTAGGTGCCTGCCCAAGAGCGATTCATCTTCATCACTTCCAAAGACCAACCCCACACACAGCGCAACTCGCCCGCAGCAGACATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS TCA 72 bp TGGGGTTCTGATAGCCTGGGTCTTTTTGCAGGGAACTaGTGGTCCCTCGTGCCATCCCTCGTGATGGCACGA +
Preference number: 6 (lower is better)
Translates to: WGSDSLGLFAGN*WSLVPSLVMAR
Trigger: TCGTGCCATCACGAGGGATGGCACGAGGGACCATCAGTTCCCTGCAAAAAGACCCAGGCTATCAGAACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411486.7
ENST00000432087.5
ENST00000441687.5
CDS CAA 72 bp CCTGAACGTGAAGGTCAGATGTCTGCTGCGGGCGAGTaGCGCTGTGTGTGGGGTTGGTCTTTGGAAGTGATG +
Preference number: 6 (lower is better)
Translates to: PEREGQMSAAGE*RCVWGWSLEVM
Trigger: CATCACTTCCAAAGACCAACCCCACACACAGCGCAACTCGCCCGCAGCAGACATCTGACCTTCACGTTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CAA 90 bp CCAAATTCTCAATCCCTGTGGCGTCTCGTAGGTCAGCGTGGCCATTaGCACCACCGGGGTGTCCTCGAAGGGCTGGTTGTACTTCTCTAT +
Preference number: 6 (lower is better)
Translates to: PNSQSLWRLVGQRGH*HHRGVLEGLVVLLY
Trigger: ATAGAGAAGTACAACCAGCCCTTCGAGGACACCCCGGTGGTGCAAATGGCCACGCTGACCTACGAGACGCCACAGGGATTGAGAATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000453122.1
ENST00000454020.1
CDS GCA 72 bp CTTGATGGCTTTGTGCTCAACAGCCGGCTCATGGAGTaGAGCATCCCTGCGTACAGGTCACTGATGGTCACA +
Preference number: 6 (lower is better)
Translates to: LDGFVLNSRLME*SIPAYRSLMVT
Trigger: TGTGACCATCAGTGACCTGTACGCAGGGATGCTGCACTCCATGAGCCGGCTGTTGAGCACAAAGCCATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000434039.1
ENST00000441687.5
ENST00000454020.1
CDS CCA 72 bp CTAAGGCCCAAGCAACTGACTCTTCCTGGTCTGACGTaGCATCGACCTCACCGCTTTTTGAATCGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: LRPKQLTLPGLT*HRPHRFLNRLP
Trigger: TGGGAGCCGATTCAAAAAGCGGTGAGGTCGATGCCACGTCAGACCAGGAAGAGTCAGTTGCTTGGGCCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411486.7
CDS CCA 72 bp GGTCAGATGTCTGCTGCGGGCGAGTTGCGCTGTGTGTaGGGTTGGTCTTTGGAAGTGATGAAGATGAATCGC +
Preference number: 6 (lower is better)
Translates to: GQMSAAGELRCV*GWSLEVMKMNR
Trigger: GCGATTCATCTTCATCACTTCCAAAGACCAACCCCACACACAGCGCAACTCGCCCGCAGCAGACATCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CCA 72 bp ATGTCTGCTGCGGGCGAGTTGCGCTGTGTGTGGGGTTaGTCTTTGGAAGTGATGAAGATGAATCGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: MSAAGELRCVWG*SLEVMKMNRSW
Trigger: CCAAGAGCGATTCATCTTCATCACTTCCAAAGACCAACCCCACACACAGCGCAACTCGCCCGCAGCAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CCA 72 bp CTAAGGCCCAAGCAACTGACTCTTCCTGGTCTGACGTaGCATCGACCTCACCGCTTTTTGAATCTGGATCTC +
Preference number: 6 (lower is better)
Translates to: LRPKQLTLPGLT*HRPHRFLNLDL
Trigger: GAGATCCAGATTCAAAAAGCGGTGAGGTCGATGCCACGTCAGACCAGGAAGAGTCAGTTGCTTGGGCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454020.1
CDS CAA 90 bp CTCATGGAGTGCAGCATCCCTGCGTACAGGTCACTGATGGTCACATaGCAAATGTCATCATCTTCAAAGGGCTGGCTGCTTAAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LMECSIPAYRSLMVT*QMSSSSKGWLLKKL
Trigger: CAGCTTCTTAAGCAGCCAGCCCTTTGAAGATGATGACATTTGCAATGTGACCATCAGTGACCTGTACGCAGGGATGCTGCACTCCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000434039.1
ENST00000441687.5
ENST00000454020.1
CDS CAA 90 bp CTGTGTGTGGGGTTGGTCTTTGGAAGTGATGAAGATGAATCGCTCTaGGGCAGGCACCTACCTGCTTCCAGAGATCTTTTGCCTAGGTTT +
Preference number: 6 (lower is better)
Translates to: LCVGLVFGSDEDESL*GRHLPASRDLLPRF
Trigger: AAACCTAGGCAAAAGATCTCTGGAAGCAGGTAGGTGCCTGCCCAAGAGCGATTCATCTTCATCACTTCCAAAGACCAACCCCACACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CAA 90 bp AACTATTTCCCTGAACGTGAAGGTCAGATGTCTGCTGCGGGCGAGTaGCGCTGTGTGTGGGGTTGGTCTTTGGAAGTGATGAAGATGAAT +
Preference number: 6 (lower is better)
Translates to: NYFPEREGQMSAAGE*RCVWGWSLEVMKMN
Trigger: ATTCATCTTCATCACTTCCAAAGACCAACCCCACACACAGCGCAACTCGCCCGCAGCAGACATCTGACCTTCACGTTCAGGGAAATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS TCA 72 bp GGCTCATGGAGTGCAGCATCCCTGCGTACAGGTCACTaGTGGTCACATTGCAAATGTCATCATCTTCAAAGG +
Preference number: 6 (lower is better)
Translates to: GSWSAASLRTGH*WSHCKCHHLQR
Trigger: CCTTTGAAGATGATGACATTTGCAATGTGACCATCAGTGACCTGTACGCAGGGATGCTGCACTCCATGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000434039.1
ENST00000441687.5
ENST00000454020.1
CDS GCA 72 bp CATCATCTTCAAAGGGCTGGCTGCTTAAGAAGCTGCTaGTACTGGTCTCTTGTAGGGAGAGGCTGTCATTTC +
Preference number: 6 (lower is better)
Translates to: HHLQRAGCLRSC*YWSLVGRGCHF
Trigger: GAAATGACAGCCTCTCCCTACAAGAGACCAGTAGCAGCAGCTTCTTAAGCAGCCAGCCCTTTGAAGATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000434039.1
ENST00000441687.5
ENST00000454020.1
CDS GCA 72 bp TGTCATCATCTTCAAAGGGCTGGCTGCTTAAGAAGCTaGTGCTACTGGTCTCTTGTAGGGAGAGGCTGTCAT +
Preference number: 6 (lower is better)
Translates to: CHHLQRAGCLRS*CYWSLVGRGCH
Trigger: ATGACAGCCTCTCCCTACAAGAGACCAGTAGCAGCAGCTTCTTAAGCAGCCAGCCCTTTGAAGATGATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000434039.1
ENST00000441687.5
ENST00000454020.1
CDS CCA 72 bp GGTTGGTCTTTGGAAGTGATGAAGATGAATCGCTCTTaGGCAGGCACCTACCTGCTTCCAGAGATCTTTTGC +
Preference number: 6 (lower is better)
Translates to: GWSLEVMKMNRS*AGTYLLPEIFC
Trigger: GCAAAAGATCTCTGGAAGCAGGTAGGTGCCTGCCCAAGAGCGATTCATCTTCATCACTTCCAAAGACCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CAA 72 bp TGCAGCATCCCTGCGTACAGGTCACTGATGGTCACATaGCAAATGTCATCATCTTCAAAGGGCTGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: CSIPAYRSLMVT*QMSSSSKGWLL
Trigger: AAGCAGCCAGCCCTTTGAAGATGATGACATTTGCAATGTGACCATCAGTGACCTGTACGCAGGGATGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000434039.1
ENST00000441687.5
ENST00000454020.1
CDS CAA 72 bp GGGTTGGTCTTTGGAAGTGATGAAGATGAATCGCTCTaGGGCAGGCACCTACCTGCTTCCAGAGATCTTTTG +
Preference number: 6 (lower is better)
Translates to: GLVFGSDEDESL*GRHLPASRDLL
Trigger: CAAAAGATCTCTGGAAGCAGGTAGGTGCCTGCCCAAGAGCGATTCATCTTCATCACTTCCAAAGACCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS TCA 72 bp GTTTTGCATGATGAACGTTTTGGTGGAGATGATGCTTaGTGGCTTTGTGCTCAACAGCCGGCTCATGGAGTG +
Preference number: 6 (lower is better)
Translates to: VLHDERFGGDDA*WLCAQQPAHGV
Trigger: CACTCCATGAGCCGGCTGTTGAGCACAAAGCCATCAAGCATCATCTCCACCAAAACGTTCATCATGCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000434039.1
ENST00000441687.5
ENST00000454020.1
CDS CCA 72 bp ATGAAGCTGGTTTCGCTGGGTCACCAGGACTCTTTCTaGAGATACGACTGCAGTATCCTCAAAATACTCTGC +
Preference number: 6 (lower is better)
Translates to: MKLVSLGHQDSF*RYDCSILKILC
Trigger: GCAGAGTATTTTGAGGATACTGCAGTCGTATCTCCAGAAAGAGTCCTGGTGACCCAGCGAAACCAGCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434039.1
CDS TCA 72 bp TCAGAGCAGGGTATGAAGTTCTCCTTGGAGCTCCTCTaGGAACGTCTGGCTCCTTTGCAATATGTTTTGTTC +
Preference number: 6 (lower is better)
Translates to: SEQGMKFSLELL*ERLAPLQYVLF
Trigger: GAACAAAACATATTGCAAAGGAGCCAGACGTTCTCAGAGGAGCTCCAAGGAGAACTTCATACCCTGCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CAA 72 bp CTCCTCCTGGAGTTCCAGTTTTGCATGATGAACGTTTaGGTGGAGATGATGCTTGATGGCTTTGTGCTCAAC +
Preference number: 6 (lower is better)
Translates to: LLLEFQFCMMNV*VEMMLDGFVLN
Trigger: GTTGAGCACAAAGCCATCAAGCATCATCTCCACCAAAACGTTCATCATGCAAAACTGGAACTCCAGGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
ENST00000454020.1
CDS GCA 72 bp TCTCCTTGGAGCTCCTCTGAGAACGTCTGGCTCCTTTaGAATATGTTTTGTTCATCCTGCTCTTATATCTGT +
Preference number: 6 (lower is better)
Translates to: SPWSSSENVWLL*NMFCSSCSYIC
Trigger: ACAGATATAAGAGCAGGATGAACAAAACATATTGCAAAGGAGCCAGACGTTCTCAGAGGAGCTCCAAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS GCA 72 bp AACCTGTCTTACGGCAAGAAACATCTAATACGTTCTTaGAATCTCTTAATGCCCCTGTCCCTTTCACAGGCT +
Preference number: 6 (lower is better)
Translates to: NLSYGKKHLIRS*NLLMPLSLSQA
Trigger: AGCCTGTGAAAGGGACAGGGGCATTAAGAGATTGCAAGAACGTATTAGATGTTTCTTGCCGTAAGACAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CAA 72 bp TCTCCCTCTGACGGTTCTCTCCATGGCCCTGTCGTATaGTTGGTCTGGAAACTATTTTTACAGGAGAAATTA +
Preference number: 6 (lower is better)
Translates to: SPSDGSLHGPVV*LVWKLFLQEKL
Trigger: TAATTTCTCCTGTAAAAATAGTTTCCAGACCAACAATACGACAGGGCCATGGAGAGAACCGTCAGAGGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CAA 72 bp CTCTTGGGCAGGCACCTACCTGCTTCCAGAGATCTTTaGCCTAGGTTTTCAAAAGCCTCACTTAAACTTTTT +
Preference number: 6 (lower is better)
Translates to: LLGRHLPASRDL*PRFSKASLKLF
Trigger: AAAAAGTTTAAGTGAGGCTTTTGAAAACCTAGGCAAAAGATCTCTGGAAGCAGGTAGGTGCCTGCCCAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS TCA 72 bp GAGAAGTCAGAATTTTTAAGAGCTTCTGAGTATAGCTaGCCTTTTGGCTTCTGGAACAAACTGGCAAGCTCA +
Preference number: 6 (lower is better)
Translates to: EKSEFLRASEYS*PFGFWNKLASS
Trigger: TGAGCTTGCCAGTTTGTTCCAGAAGCCAAAAGGTCAGCTATACTCAGAAGCTCTTAAAAATTCTGACTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373395.3
CDS GCA 72 bp TTGCAATATGTTTTGTTCATCCTGCTCTTATATCTGTaGCTCCTCCTGGAGTTCCAGTTTTGCATGATGAAC +
Preference number: 6 (lower is better)
Translates to: LQYVLFILLLYL*LLLEFQFCMMN
Trigger: GTTCATCATGCAAAACTGGAACTCCAGGAGGAGGCACAGATATAAGAGCAGGATGAACAAAACATATTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS GCA 72 bp AGTAAATCAAGGAAGAATACTTCGAGGGTGTCACTTTaGGCTCCTTCCAACTTGGATCTAACTTATGGATTT +
Preference number: 6 (lower is better)
Translates to: SKSRKNTSRVSL*APSNLDLTYGF
Trigger: AAATCCATAAGTTAGATCCAAGTTGGAAGGAGCGCAAAGTGACACCCTCGAAGTATTCTTCCTTGATTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5
CDS CAA 72 bp CACTGTCATCTGCCCAGGAGATTTGAGGCAATACTTTaGATGAAGCTTGTCAAATTCTTCTTTAATTTCATC +
Preference number: 6 (lower is better)
Translates to: HCHLPRRFEAIL*MKLVKFFFNFI
Trigger: GATGAAATTAAAGAAGAATTTGACAAGCTTCATCAAAAGTATTGCCTCAAATCTCCTGGGCAGATGACAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411486.7
ENST00000414924.5
ENST00000432087.5
ENST00000441687.5