RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEBP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000051620

Ensembl transcript IDs: ENST00000367697.7, ENST00000448741.5, ENST00000453452.1, ENST00000607197.6

Found 561 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAAGCACCCTCAGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTaGAGTACATGCTGCCAGGTTAGGTGGCTCCTCTGGCATAGATCC +
Preference number: 1 (lower is better)
Translates to: PSTLRIQSQEYAPGP*STCCQVRWLLWHRS
Trigger: GGATCTATGCCAGAGGAGCCACCTAACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCTGAGGGTGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp GCCACCTATCCACCAGGGATGGGGGCCTCCGAGCCAGCCAGACAGTaGGTCACTCAGCCTGCAAATGCTGTCTTACCACCTACGTTCGTG +
Preference number: 1 (lower is better)
Translates to: ATYPPGMGASEPARQ*VTQPANAVLPPTFV
Trigger: CACGAACGTAGGTGGTAAGACAGCATTTGCAGGCTGAGTGACTCACTGTCTGGCTGGCTCGGAGGCCCCCATCCCTGGTGGATAGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp AGGGATGGGGGCCTCCGAGCCAGCCAGACAGTGAGTCACTCAGCCTaGAAATGCTGTCTTACCACCTACGTTCGTGGGCCACTGGTACCA +
Preference number: 1 (lower is better)
Translates to: RDGGLRASQTVSHSA*KCCLTTYVRGPLVP
Trigger: TGGTACCAGTGGCCCACGAACGTAGGTGGTAAGACAGCATTTGCAGGCTGAGTGACTCACTGTCTGGCTGGCTCGGAGGCCCCCATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp GAAGTCTTCATCACTGGACAGCCTTCTTGTGCCAGGGACTGTCTGTaGCACCTATCCACCAGGGATGGGGGCCTCCGAGCCAGCCAGACA +
Preference number: 1 (lower is better)
Translates to: EVFITGQPSCARDCL*HLSTRDGGLRASQT
Trigger: TGTCTGGCTGGCTCGGAGGCCCCCATCCCTGGTGGATAGGTGGCACAGACAGTCCCTGGCACAAGAAGGCTGTCCAGTGATGAAGACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp GGGGGCCTCCGAGCCAGCCAGACAGTGAGTCACTCAGCCTGCAAATaGTGTCTTACCACCTACGTTCGTGGGCCACTGGTACCAATTGTG +
Preference number: 1 (lower is better)
Translates to: GGLRASQTVSHSACK*CLTTYVRGPLVPIV
Trigger: CACAATTGGTACCAGTGGCCCACGAACGTAGGTGGTAAGACAGCATTTGCAGGCTGAGTGACTCACTGTCTGGCTGGCTCGGAGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp CTCAGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATaGTGCCAGGTTAGGTGGCTCCTCTGGCATAGATCCCATTTCTCC +
Preference number: 1 (lower is better)
Translates to: LRIQSQEYAPGPCST*CQVRWLLWHRSHFS
Trigger: GGAGAAATGGGATCTATGCCAGAGGAGCCACCTAACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp TCCAGGGGACCCACTGCAGATCTACAGCACTCTCTGTCTGTGTGCTaGTGCCTCCTCTCCTCTCACTTACTCACCTTGGCCTCCGGTGAC +
Preference number: 1 (lower is better)
Translates to: SRGPTADLQHSLSVC*CLLSSHLLTLASGD
Trigger: GTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGAGAGGAGGCAGCAGCACACAGACAGAGAGTGCTGTAGATCTGCAGTGGGTCCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp GACTCCAGGGGACCCACTGCAGATCTACAGCACTCTCTGTCTGTGTaGTGCTGCCTCCTCTCCTCTCACTTACTCACCTTGGCCTCCGGT +
Preference number: 1 (lower is better)
Translates to: DSRGPTADLQHSLSV*CCLLSSHLLTLASG
Trigger: ACCGGAGGCCAAGGTGAGTAAGTGAGAGGAGAGGAGGCAGCAGCACACAGACAGAGAGTGCTGTAGATCTGCAGTGGGTCCCCTGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp AGTACAGAGGGTGCCTCCAGTGGGTCCGCTAAGTTCCACACACATTaGTCTCGCCACTATCCTCTGACAGCAGGCTTGCCTCCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: STEGASSGSAKFHTH*SRHYPLTAGLPPPA
Trigger: TGCAGGAGGAGGCAAGCCTGCTGTCAGAGGATAGTGGCGAGAGCAATGTGTGTGGAACTTAGCGGACCCACTGGAGGCACCCTCTGTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp CCTCCGGTGACACTGATCTCCATCTCCTCAACACAGCAGGACCACTaGTCTCTGGCTTCCCTCTCCCTGCTTTGCTGCCTAGAAACTGCC +
Preference number: 1 (lower is better)
Translates to: PPVTLISISSTQQDH*SLASLSLLCCLETA
Trigger: GGCAGTTTCTAGGCAGCAAAGCAGGGAGAGGGAAGCCAGAGACCAGTGGTCCTGCTGTGTTGAGGAGATGGAGATCAGTGTCACCGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp GGACGAGGCAGGGAGAGCAGGCGAGCTGCCATCCCAGGGGAACTCTaGGAAAAAGGTCACTCATTGGAGGAGTCCTGTGTTGGACTGAAA +
Preference number: 1 (lower is better)
Translates to: GRGRESRRAAIPGEL*EKGHSLEESCVGLK
Trigger: TTTCAGTCCAACACAGGACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCCTGCTCTCCCTGCCTCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp GGCACCCTGCTCTGTGGTGGCATCTTAGGAGGAGAGGGGAAAGAGTaGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCTGCATGCGA +
Preference number: 1 (lower is better)
Translates to: GTLLCGGILGGEGKE*LSWFCRSRGSACMR
Trigger: TCGCATGCAGGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCCTAAGATGCCACCACAGAGCAGGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp TGGGCTCTTCAAGGTCTCATCATCATCCACATTGCTCTCAGCAAGTaGAGTTCCATCACAGCCCTTCCTGCCAGCCCCAGCCTGCCGAGG +
Preference number: 1 (lower is better)
Translates to: WALQGLIIIHIALSK*SSITALPASPSLPR
Trigger: CCTCGGCAGGCTGGGGCTGGCAGGAAGGGCTGTGATGGAACTTCACTTGCTGAGAGCAATGTGGATGATGATGAGACCTTGAAGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp CCACTGGTCTCTGGCTTCCCTCTCCCTGCTTTGCTGCCTAGAAACTaGCTCCAGGCCATTCGCCTGAGCAATCACTGGACTCACCTCATT +
Preference number: 1 (lower is better)
Translates to: PLVSGFPLPALLPRN*LQAIRLSNHWTHLI
Trigger: AATGAGGTGAGTCCAGTGATTGCTCAGGCGAATGGCCTGGAGGCAGTTTCTAGGCAGCAAAGCAGGGAGAGGGAAGCCAGAGACCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp CTCTGTCTGTGTGCTGCTGCCTCCTCTCCTCTCACTTACTCACCTTaGCCTCCGGTGACACTGATCTCCATCTCCTCAACACAGCAGGAC +
Preference number: 1 (lower is better)
Translates to: LCLCAAASSPLTYSP*PPVTLISISSTQQD
Trigger: GTCCTGCTGTGTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGAGAGGAGGCAGCAGCACACAGACAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp GAGACCAGAAGGTCTCTGGGGGAGGTGACAACCCAACAGAGGAGGTaGAACATCACAGACACTGGATGGCACCATCTACAAGGGCACGTG +
Preference number: 1 (lower is better)
Translates to: ETRRSLGEVTTQQRR*NITDTGWHHLQGHV
Trigger: CACGTGCCCTTGTAGATGGTGCCATCCAGTGTCTGTGATGTTCCACCTCCTCTGTTGGGTTGTCACCTCCCCCAGAGACCTTCTGGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp GAGGGTCCTGAGCTCCTGGGAGCCAAACCCTTCTCAGACCAGGGTTaGTGCACTAGTCCATTCAGTTACAACTGGGCAAGGAGTACAGAG +
Preference number: 1 (lower is better)
Translates to: EGPELLGAKPFSDQG*CTSPFSYNWARSTE
Trigger: CTCTGTACTCCTTGCCCAGTTGTAACTGAATGGACTAGTGCAGCAACCCTGGTCTGAGAAGGGTTTGGCTCCCAGGAGCTCAGGACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp GCTGAAGGATGGGTCCCCTGGGCCTTCCCGTGGAACATAATTGTCTaGTGGGTCACCTTGCCTCATATATCCATGCTGGCATGCTCCCTT +
Preference number: 1 (lower is better)
Translates to: AEGWVPWAFPWNIIV*WVTLPHISMLACSL
Trigger: AAGGGAGCATGCCAGCATGGATATATGAGGCAAGGTGACCCATCAGACAATTATGTTCCACGGGAAGGCCCAGGGGACCCATCCTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp TTTCTTCTAACACCTTCACTCAACCAAGGACTCCAGGGGACCCACTaGAGATCTACAGCACTCTCTGTCTGTGTGCTGCTGCCTCCTCTC +
Preference number: 1 (lower is better)
Translates to: FLLTPSLNQGLQGTH*RSTALSVCVLLPPL
Trigger: GAGAGGAGGCAGCAGCACACAGACAGAGAGTGCTGTAGATCTGCAGTGGGTCCCCTGGAGTCCTTGGTTGAGTGAAGGTGTTAGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp GCAGTGCTCTCTTGCTCAGCAAGCAGTGTGTGCAGCTTTTTGTTCTaGGTACTGAACGTGGCCTCTCCCTTTAACACTGTCACCTCTGCC +
Preference number: 1 (lower is better)
Translates to: AVLSCSASSVCSFLF*VLNVASPFNTVTSA
Trigger: GGCAGAGGTGACAGTGTTAAAGGGAGAGGCCACGTTCAGTACCCAGAACAAAAAGCTGCACACACTGCTTGCTGAGCAAGAGAGCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp GGGGGAGGTGACAACCCAACAGAGGAGGTGGAACATCACAGACACTaGATGGCACCATCTACAAGGGCACGTGGAAAAACAAGTCCACAT +
Preference number: 1 (lower is better)
Translates to: GGGDNPTEEVEHHRH*MAPSTRARGKTSPH
Trigger: ATGTGGACTTGTTTTTCCACGTGCCCTTGTAGATGGTGCCATCCAGTGTCTGTGATGTTCCACCTCCTCTGTTGGGTTGTCACCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp TGTAGACTAGGTCCCTCTCTCCCACAGAATAGTGTGTCCTTATCTTaGAATCTGGCGTGGACCCTGAAGACGGTAACGGGGAGACTGTCG +
Preference number: 1 (lower is better)
Translates to: CRLGPSLPQNSVSLS*NLAWTLKTVTGRLS
Trigger: CGACAGTCTCCCCGTTACCGTCTTCAGGGTCCACGCCAGATTTCAAGATAAGGACACACTATTCTGTGGGAGAGAGGGACCTAGTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp CCATTTCTCCCTCATCAGACCCCTCAGCCGCAATCAGTTATGTTGTaGCTTAAGTCTCGTTATAGGCCTGGTAGCCAGGAGAAGGGGAGG +
Preference number: 1 (lower is better)
Translates to: PFLPHQTPQPQSVML*LKSRYRPGSQEKGR
Trigger: CCTCCCCTTCTCCTGGCTACCAGGCCTATAACGAGACTTAAGTCACAACATAACTGATTGCGGCTGAGGGGTCTGATGAGGGAGAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp TTGCCTCCTCCTGCAGTTCAGGGTCAATTACCCTTGACTAGATGGTaGCTTCTTGCCTACTGGTCCCTGAACACAGAGTCCAAAGTGCCC +
Preference number: 1 (lower is better)
Translates to: LPPPAVQGQLPLTRW*LLAYWSLNTESKVP
Trigger: GGGCACTTTGGACTCTGTGTTCAGGGACCAGTAGGCAAGAAGTCACCATCTAGTCAAGGGTAATTGACCCTGAACTGCAGGAGGAGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp CAGGCATGGATGAAATACAGGGAGAGAAGAATCGAGACTCATCCCTaGAACATGGCACCTTCCATGTGGCTACTCTACTCCTTGGGGCCC +
Preference number: 1 (lower is better)
Translates to: QAWMKYRERRIETHP*NMAPSMWLLYSLGP
Trigger: GGGCCCCAAGGAGTAGAGTAGCCACATGGAAGGTGCCATGTTTCAGGGATGAGTCTCGATTCTTCTCTCCCTGTATTTCATCCATGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp GATACAAACAGAAAAGCAGTGAGACCAGAAGGTCTCTGGGGGAGGTaGCAACCCAACAGAGGAGGTGGAACATCACAGACACTGGATGGC +
Preference number: 1 (lower is better)
Translates to: DTNRKAVRPEGLWGR*QPNRGGGTSQTLDG
Trigger: GCCATCCAGTGTCTGTGATGTTCCACCTCCTCTGTTGGGTTGTCACCTCCCCCAGAGACCTTCTGGTCTCACTGCTTTTCTGTTTGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp GTCCGCAGTTTTCTTTATCCGAGAGACCGTGCCCTACAAGAGCAGTaGTCTCTTGCTCAGCAAGCAGTGTGTGCAGCTTTTTGTTCTGGG +
Preference number: 1 (lower is better)
Translates to: VRSFLYPRDRALQEQ*SLAQQAVCAAFCSG
Trigger: CCCAGAACAAAAAGCTGCACACACTGCTTGCTGAGCAAGAGAGCACTGCTCTTGTAGGGCACGGTCTCTCGGATAAAGAAAACTGCGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp GAGGTGACAACCCAACAGAGGAGGTGGAACATCACAGACACTGGATaGCACCATCTACAAGGGCACGTGGAAAAACAAGTCCACATCGTG +
Preference number: 1 (lower is better)
Translates to: EVTTQQRRWNITDTG*HHLQGHVEKQVHIV
Trigger: CACGATGTGGACTTGTTTTTCCACGTGCCCTTGTAGATGGTGCCATCCAGTGTCTGTGATGTTCCACCTCCTCTGTTGGGTTGTCACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp TCTCTTGCTCAGCAAGCAGTGTGTGCAGCTTTTTGTTCTGGGTACTaGACGTGGCCTCTCCCTTTAACACTGTCACCTCTGCCCAAGATG +
Preference number: 1 (lower is better)
Translates to: SLAQQAVCAAFCSGY*TWPLPLTLSPLPKM
Trigger: CATCTTGGGCAGAGGTGACAGTGTTAAAGGGAGAGGCCACGTTCAGTACCCAGAACAAAAAGCTGCACACACTGCTTGCTGAGCAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp TGGAAGCCCACTGTCCTTGTCTCTTTTATCCACCCTTCCCATATTTaGGACACCCAAATCACCCACCAGTCATTGCGTTCCCCTGCACCA +
Preference number: 1 (lower is better)
Translates to: WKPTVLVSFIHPSHI*DTQITHQSLRSPAP
Trigger: TGGTGCAGGGGAACGCAATGACTGGTGGGTGATTTGGGTGTCTCAAATATGGGAAGGGTGGATAAAAGAGACAAGGACAGTGGGCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp TCAAGCGACCAGTTGGTCTTCACAGCCTCATCAGGGTCTCAGCATTaGTATTTGTTGCAGGCAGGTTGGATAGTCACAGTGAGCAGTGTC +
Preference number: 1 (lower is better)
Translates to: SSDQLVFTASSGSQH*YLLQAGWIVTVSSV
Trigger: GACACTGCTCACTGTGACTATCCAACCTGCCTGCAACAAATACCAATGCTGAGACCCTGATGAGGCTGTGAAGACCAACTGGTCGCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp CCATATTTGAGACACCCAAATCACCCACCAGTCATTGCGTTCCCCTaGACCAGCATGCCATTTCATCTGAAGTCTTCATCACTGGACAGC +
Preference number: 1 (lower is better)
Translates to: PYLRHPNHPPVIAFP*TSMPFHLKSSSLDS
Trigger: GCTGTCCAGTGATGAAGACTTCAGATGAAATGGCATGCTGGTGCAGGGGAACGCAATGACTGGTGGGTGATTTGGGTGTCTCAAATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp TCCACCCTTCCCATATTTGAGACACCCAAATCACCCACCAGTCATTaGGTTCCCCTGCACCAGCATGCCATTTCATCTGAAGTCTTCATC +
Preference number: 1 (lower is better)
Translates to: STLPIFETPKSPTSH*VPLHQHAISSEVFI
Trigger: GATGAAGACTTCAGATGAAATGGCATGCTGGTGCAGGGGAACGCAATGACTGGTGGGTGATTTGGGTGTCTCAAATATGGGAAGGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp TGCCACTGTGCAGACATGGCGGTTGGAGTAATTGCTCTTGCAGTTTaGTTATGTCCTCTGGTCTGGCTTGGAACTGCTCCTGTACATATC +
Preference number: 1 (lower is better)
Translates to: CHCADMAVGVIALAV*LCPLVWLGTAPVHI
Trigger: GATATGTACAGGAGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCCAACCGCCATGTCTGCACAGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp GTCCCTCAGTGGTTCGTTGGGTGCGATGGTAAGTGGGGTCACTCCTaGCTCCACTCCTTGGTTCTGAAATCTATATATTCCTGTTGTAGA +
Preference number: 1 (lower is better)
Translates to: VPQWFVGCDGKWGHS*LHSLVLKSIYSCCR
Trigger: TCTACAACAGGAATATATAGATTTCAGAACCAAGGAGTGGAGGCAGGAGTGACCCCACTTACCATCGCACCCAACGAACCACTGAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp AGTGAGTCACTCAGCCTGCAAATGCTGTCTTACCACCTACGTTCGTaGGCCACTGGTACCAATTGTGCCAATTTTAGGCTGAGATGGAGT +
Preference number: 1 (lower is better)
Translates to: SESLSLQMLSYHLRS*ATGTNCANFRLRWS
Trigger: ACTCCATCTCAGCCTAAAATTGGCACAATTGGTACCAGTGGCCCACGAACGTAGGTGGTAAGACAGCATTTGCAGGCTGAGTGACTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp AAGCCACTCGGTAACTGTAATACAGTTTCTCTCAGTTGCCTGCTCTaGCCTACCTTCCACAGCGGCCAGCCTTTATTCACAGAACAAGAG +
Preference number: 1 (lower is better)
Translates to: KPLGNCNTVSLSCLL*PTFHSGQPLFTEQE
Trigger: CTCTTGTTCTGTGAATAAAGGCTGGCCGCTGTGGAAGGTAGGTCAGAGCAGGCAACTGAGAGAAACTGTATTACAGTTACCGAGTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp AACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTaGGAACTTCTTACAGGCATGGATGAAATACAGGGAGAGAAGAAT +
Preference number: 1 (lower is better)
Translates to: NLSPGGSDDVACGET*ELLTGMDEIQGEKN
Trigger: ATTCTTCTCTCCCTGTATTTCATCCATGCCTGTAAGAAGTTCTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp TTTTCTTTATCCGAGAGACCGTGCCCTACAAGAGCAGTGCTCTCTTaGTCAGCAAGCAGTGTGTGCAGCTTTTTGTTCTGGGTACTGAAC +
Preference number: 1 (lower is better)
Translates to: FSLSERPCPTRAVLS*SASSVCSFLFWVLN
Trigger: GTTCAGTACCCAGAACAAAAAGCTGCACACACTGCTTGCTGAGCAAGAGAGCACTGCTCTTGTAGGGCACGGTCTCTCGGATAAAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp AATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTaGTCCTGTACATATCATTTCCATCTTCCAATGGGCTGCTGCCGA +
Preference number: 1 (lower is better)
Translates to: NCSCSLLMSSGLAWN*SCTYHFHLPMGCCR
Trigger: TCGGCAGCAGCCCATTGGAAGATGGAAATGATATGTACAGGAGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp ACTGTTTCAGGGCGCCAATGGACCTCTCTTCCTGAGGATAAATGTTaGAAGAGGAGTTTGGTAGGACCAACTATAGCACCTTCCTGCAAA +
Preference number: 1 (lower is better)
Translates to: TVSGRQWTSLPEDKC*KRSLVGPTIAPSCK
Trigger: TTTGCAGGAAGGTGCTATAGTTGGTCCTACCAAACTCCTCTTTCAACATTTATCCTCAGGAAGAGAGGTCCATTGGCGCCCTGAAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp CTGTTAGCTACTTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTaGTCTGCTTGGCTACAGCATGAGATGAGGATTGTTGGCAAGCTA +
Preference number: 1 (lower is better)
Translates to: LLATFTIKSCAWPSA*SAWLQHEMRIVGKL
Trigger: TAGCTTGCCAACAATCCTCATCTCATGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAAGTAGCTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp CATGCGATGCTGATTCCATCATCAAATGAGCACAGCAGCATAATTTaGTTTGGCAGATGTGAGGATGTTGTTGGGGGAATGGAGGGTCAT +
Preference number: 1 (lower is better)
Translates to: HAMLIPSSNEHSSII*FGRCEDVVGGMEGH
Trigger: ATGACCCTCCATTCCCCCAACAACATCCTCACATCTGCCAAAGCAAATTATGCTGCTGTGCTCATTTGATGATGGAATCAGCATCGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp GCGGTTGGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTaGCTTGGAACTGCTCCTGTACATATCATTTCCATCTTCCAATGG +
Preference number: 1 (lower is better)
Translates to: AVGVIALAVCLCPLV*LGTAPVHIISIFQW
Trigger: CCATTGGAAGATGGAAATGATATGTACAGGAGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCCAACCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp CAAGGGCACGTGGAAAAACAAGTCCACATCGTGTCCTATGGACTTTaGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACG +
Preference number: 1 (lower is better)
Translates to: QGHVEKQVHIVSYGL*NKIRITYRLAVQMT
Trigger: CGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCCATAGGACACGATGTGGACTTGTTTTTCCACGTGCCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp GGTGGAACATCACAGACACTGGATGGCACCATCTACAAGGGCACGTaGAAAAACAAGTCCACATCGTGTCCTATGGACTTTGGAATAAAA +
Preference number: 1 (lower is better)
Translates to: GGTSQTLDGTIYKGT*KNKSTSCPMDFGIK
Trigger: TTTTATTCCAAAGTCCATAGGACACGATGTGGACTTGTTTTTCCACGTGCCCTTGTAGATGGTGCCATCCAGTGTCTGTGATGTTCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp AAGGCAACACCTGTTGGAGGACTCCACCTGATGACCCATGCATTATaGGTTATTTCTACTCTGGCTAGTGGAAACACAAACTTTTCCCAG +
Preference number: 1 (lower is better)
Translates to: KATPVGGLHLMTHAL*VISTLASGNTNFSQ
Trigger: CTGGGAAAAGTTTGTGTTTCCACTAGCCAGAGTAGAAATAACTCATAATGCATGGGTCATCAGGTGGAGTCCTCCAACAGGTGTTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp CATCTTTGCCACCACTGCCACTTTATGTGTGCATTTTACCAGCACTaGGGTGGGCACTGGCAAAAGCTAATAGAACAGGCTAAGTCATTT +
Preference number: 1 (lower is better)
Translates to: HLCHHCHFMCAFYQH*GGHWQKLIEQAKSF
Trigger: AAATGACTTAGCCTGTTCTATTAGCTTTTGCCAGTGCCCACCTCAGTGCTGGTAAAATGCACACATAAAGTGGCAGTGGTGGCAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp GCTTTGGCAGATGTGAGGATGTTGTTGGGGGAATGGAGGGTCATTTaGATGAAACATGGACCTGATTGTTGCGCCACTTTCCTTAATAAG +
Preference number: 1 (lower is better)
Translates to: ALADVRMLLGEWRVI*MKHGPDCCATFLNK
Trigger: CTTATTAAGGAAAGTGGCGCAACAATCAGGTCCATGTTTCATTCAAATGACCCTCCATTCCCCCAACAACATCCTCACATCTGCCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp TGCCCTAGAGCAGTGAGTCTGTATTATCTCCTGGCATTTTTCTCATaGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCT +
Preference number: 1 (lower is better)
Translates to: CPRAVSLYYLLAFFS*CEILYPESPKSIYP
Trigger: AGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAAAAATGCCAGGAGATAATACAGACTCACTGCTCTAGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp CATTTTAATGGGAGGAGGAGGAACTGTAATGACTCTTTGGGTTTCTaGGTATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCC +
Preference number: 1 (lower is better)
Translates to: HFNGRRRNCNDSLGF*VSDVNLDPDVSRYS
Trigger: GGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATACCCAGAAACCCAAAGAGTCATTACAGTTCCTCCTCCTCCCATTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp TGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTaGCATGTGGAGAGACGTGAGAACTTCTTACAGGCATGGATGAAA +
Preference number: 1 (lower is better)
Translates to: WNKIRITYRLAVQMT*HVERRENFLQAWMK
Trigger: TTTCATCCATGCCTGTAAGAAGTTCTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 90 bp CTACCACAGAGACTCTGCGGCTCACACTTAGTTTTGTTTGTTAATTaGCCTCAGCTTTTCATTATCCACTTGCAGGACGTCAATCCAACT +
Preference number: 1 (lower is better)
Translates to: LPQRLCGSHLVLFVN*PQLFIIHLQDVNPT
Trigger: AGTTGGATTGACGTCCTGCAAGTGGATAATGAAAAGCTGAGGTCAATTAACAAACAAAACTAAGTGTGAGCCGCAGAGTCTCTGTGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp TACTATCAGTGGGGAGAGAAACAAATTACTGCTTGGTCTGTCAGTTaGAAACAACCTCAATGCGATCTGCTTTCTGCCATCCTACTATTT +
Preference number: 1 (lower is better)
Translates to: YYQWGEKQITAWSVS*KQPQCDLLSAILLF
Trigger: AAATAGTAGGATGGCAGAAAGCAGATCGCATTGAGGTTGTTTCCAACTGACAGACCAAGCAGTAATTTGTTTCTCTCCCCACTGATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 90 bp GAGAAACAAATTACTGCTTGGTCTGTCAGTTGGAAACAACCTCAATaGGATCTGCTTTCTGCCATCCTACTATTTCTGAAGAATCTTGAT +
Preference number: 1 (lower is better)
Translates to: EKQITAWSVSWKQPQ*DLLSAILLFLKNLD
Trigger: ATCAAGATTCTTCAGAAATAGTAGGATGGCAGAAAGCAGATCGCATTGAGGTTGTTTCCAACTGACAGACCAAGCAGTAATTTGTTTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 90 bp AAAATACTGTTCAAGGCAATATTTATTATGGTTTACTGCCCTGATTaGAGGAGAGGGAGTTTAGAAGCTTATACTCTTTCCCCACAGGTC +
Preference number: 1 (lower is better)
Translates to: KILFKAIFIMVYCPD*RRGSLEAYTLSPQV
Trigger: GACCTGTGGGGAAAGAGTATAAGCTTCTAAACTCCCTCTCCTCCAATCAGGGCAGTAAACCATAATAAATATTGCCTTGAACAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGCTGCCAGCCCCAGCCTaGCGAGGAGAGCCACCGCTG +
Preference number: 2 (lower is better)
Translates to: RITYRLAVQMTWHVERRELPAPA*RGEPPL
Trigger: CAGCGGTGGCTCTCCTCGGCAGGCTGGGGCTGGCAG...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACTCCCAGCAGCCTTGCTaGAGGATGGGTCCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNSQQPC*RMGPLG
Trigger: GCCCAGGGGACCCATCCTTCAGCAAGGCTGCTGGGA...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCCAGGGGCCTTGTCTGTaGTGTTCACAGTGGGAGGGT +
Preference number: 2 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSAQGPCL*CSQWEG
Trigger: ACCCTCCCACTGTGAACACCACAGACAAGGCCCCTG...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCTGGAGTGCAGTGGCATaGTCAGGACTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSAWSAVA*SGLTAT
Trigger: GGTTGCAGTGAGTCCTGATCATGCCACTGCACTCCA...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTTCCCTCTCCCTGCTTTaGTGCCTAGAAACTGCCTCC +
Preference number: 2 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSSLSLL*CLETAS
Trigger: GGAGGCAGTTTCTAGGCAGCAAAGCAGGGAGAGGGA...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp CAGGACCCCTCGGCTGCCATTTGGAGCTTAGTGGTTAACAGGATACTGATGGCACCAAGAGTACGCCCCTaGCCCCTGCAGTACATGCTG +
Preference number: 2 (lower is better)
Translates to: QDPSAAIWSLVVNRILMAPRVRP*PLQYML
Trigger: CAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGG...TGCCATCAGTATCCTGTTAACCACTAAGCTCCAAATGGCAGCCGAGGGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTGACGGTGGCACATCTTaGCAGGGTATTGTCTCCCAC +
Preference number: 2 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSDGGTS*QGIVSH
Trigger: GTGGGAGACAATACCCTGCCAAGATGTGCCACCGTC...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 90 bp TCTCTGTCTGTGTGCTGCTGCCTCCTCTCCTCTCACTTACTCACCTaGGCCTCCGGTGACACTGATCTCCATCTCCTCAACACAGCAGGA +
Preference number: 2 (lower is better)
Translates to: SLSVCCCLLSSHLLT*ASGDTDLHLLNTAG
Trigger: TCCTGCTGTGTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGAGAGGAGGCAGCAGCACACAGACAGAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACATGATCAGGACTCACTaGAACCTCCGCCTCCCGAGC +
Preference number: 2 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNMIRTH*NLRLPS
Trigger: GCTCGGGAGGCGGAGGTTGCAGTGAGTCCTGATCAT...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGTTGCTGCCTAGAAACTaGCTCCAGGCCATTCGCCTG +
Preference number: 2 (lower is better)
Translates to: RITYRLAVQMTWHVERRELLPRN*LQAIRL
Trigger: CAGGCGAATGGCCTGGAGGCAGTTTCTAGGCAGCAA...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp CGAGACTCATCCCTGAAACATGGCACCTTCCATGTGGCTACTCTACTCCTTGGGCACACCCCTCACAGCTaGGCGGCTGGTACTTTCTTG +
Preference number: 2 (lower is better)
Translates to: RDSSLKHGTFHVATLLLGHTPHS*AAGTFL
Trigger: CAAGAAAGTACCAGCCGCCCAGCTGTGAGGGGTGTG...CCCAAGGAGTAGAGTAGCCACATGGAAGGTGCCATGTTTCAGGGATGAGTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 90 bp CTGGTAGCCAGGAGAAGGGGAGGGACCAGTCCTGAGGGACACCTTTaGCTTCATGGGGAAAGACCTTGGACACTGTCTTCCCTTGTGTTA +
Preference number: 2 (lower is better)
Translates to: LVARRRGGTSPEGHL*LHGERPWTLSSLVL
Trigger: TAACACAAGGGAAGACAGTGTCCAAGGTCTTTCCCCATGAAGCAAAAGGTGTCCCTCAGGACTGGTCCCTCCCCTTCTCCTGGCTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 90 bp CCACCTTCCTTCAGGGCCCCAGGGACCTGCACTGTGATTCTCTCATaGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTAC +
Preference number: 2 (lower is better)
Translates to: PPSFRAPGTCTVILS*GLVIYSTLHLLSPY
Trigger: GTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGAGAATCACAGTGCAGGTCCCTGGGGCCCTGAAGGAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp AGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATGCTGCCAGGTTCTTATACCACCACCTTaGTCAGTTATTGGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: RIQSQEYAPGPCSTCCQVLIPPP*SVIGWE
Trigger: TTCCCAGCCAATAACTGAGCAAGGTGGTGGTATAAG...AACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGTGGCTTTCTTGGTTCTaGCGTAGTAGGGGTTCAGCC +
Preference number: 2 (lower is better)
Translates to: RITYRLAVQMTWHVERREWLSWF*RSRGSA
Trigger: GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCA...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTTCACAGCTGGGCGGCTaGTACTTTCTTGAAGGTGAA +
Preference number: 2 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSSQLGG*YFLEGE
Trigger: TTCACCTTCAAGAAAGTACCAGCCGCCCAGCTGTGA...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACAGTTCCAGCTCTTCATaGGGAAGGGTGGGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNSSSSS*GRVGLF
Trigger: GAAGAGGCCCACCCTTCCCCATGAAGAGCTGGAACT...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCCATGGGGAAAGACCTTaGACACTGTCTTCCCTTGTG +
Preference number: 2 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTHGERP*TLSSLV
Trigger: CACAAGGGAAGACAGTGTCCAAGGTCTTTCCCCATG...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp CTACCAAGCTGCCCTAGAGCAGTGAGTCTGTATTATCTCCTGGCATTTTTCTCATCACCTCTCCGGGCCTaGCAGCCTAGGGGTTCCACA +
Preference number: 2 (lower is better)
Translates to: LPSCPRAVSLYYLLAFFSSPLRA*QPRGST
Trigger: TGTGGAACCCCTAGGCTGTCAGGCCCGGAGAGGTGA...TGAGAAAAATGCCAGGAGATAATACAGACTCACTGCTCTAGGGCAGCTTGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGGGGAGGGACCAGTCCTaGGGGACACCTTTTGCTTCA +
Preference number: 2 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKGRDQS*GTPFAS
Trigger: TGAAGCAAAAGGTGTCCCTCAGGACTGGTCCCTCCC...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCACCTCTGCCCAAGATaGTCCCCTCACCTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWHLCPR*SPHLCP
Trigger: GGGGCAGAGGTGAGGGGAGCATCTTGGGCAGAGGTG...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGTTATCCGAGAGACCGTaGCCTACAAGAGCAGTGCTC +
Preference number: 2 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRLSERP*PTRAVL
Trigger: GAGCACTGCTCTTGTAGGGCACGGTCTCTCGGATAA...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCCTGAGGGACACCTTTTaGTTCATGGGGAAAGACCTT +
Preference number: 2 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSALRDTF*FMGKDL
Trigger: AAGGTCTTTCCCCATGAAGCAAAAGGTGTCCCTCAG...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGATTAGGCAGATAACCTaGAGGCCCAGGAGATCTGCT +
Preference number: 2 (lower is better)
Translates to: RITYRLAVQMTWHVERREIRQIT*RPRRSA
Trigger: AGCAGATCTCCTGGGCCTGCAGGTTATCTGCCTAAT...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGGCATGCTCCCTTCCCTaGGCCTTCTCATTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGACSLP*AFSFLS
Trigger: AGAAAGGAATGAGAAGGCTCAGGGAAGGGAGCATGC...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTTGGAACATAATTGTCTaGTGGGTCACCTTGCCTCAT +
Preference number: 2 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSWNIIV*WVTLPH
Trigger: ATGAGGCAAGGTGACCCATCAGACAATTATGTTCCA...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCCACTCTCTGTCTGTGTaGTGCTGCCTCCTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSHSLSV*CCLLSS
Trigger: AGAGGAGAGGAGGCAGCAGCACACAGACAGAGAGTG...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACTCAGCTTGCTCTGCTTaGCTACAGCATGAGATGAGG +
Preference number: 2 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNSACSA*LQHEMR
Trigger: CCTCATCTCATGCTGTAGCCAAGCAGAGCAAGCTGA...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCCCCAATTCATCATCATaGCCAGAAGCAGATGTTCAC +
Preference number: 2 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTPNSSS*PEADVH
Trigger: GTGAACATCTGCTTCTGGCCATGATGATGAATTGGG...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGATTTCCATCTTCCAATaGGCTGCTGCCGATCCTACT +
Preference number: 2 (lower is better)
Translates to: RITYRLAVQMTWHVERREISIFQ*AAADPT
Trigger: AGTAGGATCGGCAGCAGCCCATTGGAAGATGGAAAT...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 90 bp ACAAGAGCAGTGCTCTCTTGCTCAGCAAGCAGTGTGTGCAGCTTTTaGTTCTGGGTACTGAACGTGGCCTCTCCCTTTAACACTGTCACC +
Preference number: 2 (lower is better)
Translates to: TRAVLSCSASSVCSF*FWVLNVASPFNTVT
Trigger: GGTGACAGTGTTAAAGGGAGAGGCCACGTTCAGTACCCAGAACAAAAAGCTGCACACACTGCTTGCTGAGCAAGAGAGCACTGCTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 90 bp ATGGAAGCCCACTGTCCTTGTCTCTTTTATCCACCCTTCCCATATTaGAGACACCCAAATCACCCACCAGTCATTGCGTTCCCCTGCACC +
Preference number: 2 (lower is better)
Translates to: MEAHCPCLFYPPFPY*RHPNHPPVIAFPCT
Trigger: GGTGCAGGGGAACGCAATGACTGGTGGGTGATTTGGGTGTCTCAAATATGGGAAGGGTGGATAAAAGAGACAAGGACAGTGGGCTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCAGAGCCAGCCAGACAGTaGGTCACTCAGCCTGCAAAT +
Preference number: 2 (lower is better)
Translates to: FYHQILCLAFSLLCLATAEPARQ*VTQPAN
Trigger: ATTTGCAGGCTGAGTGACTCACTGTCTGGCTGGCTC...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCGCTGCCCTAGAGCAGTaGGTCTGTATTATCTCCTGG +
Preference number: 2 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSAALEQ*VCIISW
Trigger: CCAGGAGATAATACAGACTCACTGCTCTAGGGCAGC...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTCAGGGACCTGCACTGTaGTTCTCTCATTGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: GVIALAVCLCPLVWLGTAQGPAL*FSHWAL
Trigger: CAAGGCCCAATGAGAGAATCACAGTGCAGGTCCCTG...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CGAGACTCATCCCTGAAACATGGCACCTTCCATGTGGCTACTCTACTCCTTGGGCCTCACTCTGGTAACTaGATCCCCACAACTAAAGCT +
Preference number: 2 (lower is better)
Translates to: RDSSLKHGTFHVATLLLGPHSGN*IPTTKA
Trigger: AGCTTTAGTTGTGGGGATGCAGTTACCAGAGTGAGG...CCCAAGGAGTAGAGTAGCCACATGGAAGGTGCCATGTTTCAGGGATGAGTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp GCTTTGTTAGGGGAAGTCCAAAGAAGCCTTTGGTCTAGGGACAATTTGACCTCAGCCAGGGACTGTCTGTaGCACCTATCCACCAGGGAT +
Preference number: 2 (lower is better)
Translates to: ALLGEVQRSLWSRDNLTSARDCL*HLSTRD
Trigger: ATCCCTGGTGGATAGGTGGCACAGACAGTCCCTGGC...TGAGGTCAAATTGTCCCTAGACCAAAGGCTTCTTTGGACTTCCCCTAACAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCCCCTGCAGTACATGCTaGCAGGTTAGGTGGCTCCTC +
Preference number: 2 (lower is better)
Translates to: FSWCEILYPESPKSIYPLPCSTC*QVRWLL
Trigger: GAGGAGCCACCTAACCTGGCAGCATGTACTGCAGGG...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CGAGACTCATCCCTGAAACATGGCACCTTCCATGTGGCTACTCTACTCCTTGGGCAGGCCCAGGAGATCTaGTGTAAGCCAAACTTTGAT +
Preference number: 2 (lower is better)
Translates to: RDSSLKHGTFHVATLLLGQAQEI*CKPNFD
Trigger: ATCAAAGTTTGGCTTACAGCAGATCTCCTGGGCCTG...CCCAAGGAGTAGAGTAGCCACATGGAAGGTGCCATGTTTCAGGGATGAGTCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTCACAACTGTCATCTTTaGTGGTCTTGGTGGCTTTTT +
Preference number: 2 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSHNCHL*WSWWLF
Trigger: AAAAAGCCACCAAGACCAGCAAAGATGACAGTTGTG...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCACTATAGCACCTTCCTaGAAATGGTTTTGGAACCAC +
Preference number: 2 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSATIAPS*KWFWNH
Trigger: GTGGTTCCAAAACCATTTGCAGGAAGGTGCTATAGT...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GATTGTTGCGCCACTTTCCTTAATAAGCCACTCGGTAACTGTAATACAGTTTCTCCTATCCACCAGGGATaGGGGCCTCCGAGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: DCCATFLNKPLGNCNTVSPIHQG*GPPSQP
Trigger: TGGCTGGCTCGGAGGCCCCCATCCCTGGTGGATAGG...AGAAACTGTATTACAGTTACCGAGTGGCTTATTAAGGAAAGTGGCGCAACAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGCTTCATGGGGAAGGGTaGGCCTCTTCTGAAGGATGT +
Preference number: 2 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKLHGEG*ASSEGC
Trigger: ACATCCTTCAGAAGAGGCCCACCCTTCCCCATGAAG...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGTCCTGCAAATGGTTTTaGAACCACAACTGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: RITYRLAVQMTWHVERRESCKWF*NHNWSS
Trigger: TGAGGACCAGTTGTGGTTCCAAAACCATTTGCAGGA...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 90 bp ATCAAGCGACCAGTTGGTCTTCACAGCCTCATCAGGGTCTCAGCATaGGTATTTGTTGCAGGCAGGTTGGATAGTCACAGTGAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: IKRPVGLHSLIRVSA*VFVAGRLDSHSEQC
Trigger: ACACTGCTCACTGTGACTATCCAACCTGCCTGCAACAAATACCAATGCTGAGACCCTGATGAGGCTGTGAAGACCAACTGGTCGCTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp CAGGACCCCTCGGCTGCCATTTGGAGCTTAGTGGTTAACAGGATACTGATGGCAAGGAGGGAAGTGACATaGAATTTCCCTAGATCCTCA +
Preference number: 2 (lower is better)
Translates to: QDPSAAIWSLVVNRILMARREVT*NFPRSS
Trigger: TGAGGATCTAGGGAAATTTCATGTCACTTCCCTCCT...TGCCATCAGTATCCTGTTAACCACTAAGCTCCAAATGGCAGCCGAGGGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGATTTTTGTGTCCAGCTaGATTTCACCTCTCCGGGCC +
Preference number: 2 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKIFVSS*ISPLRA
Trigger: GGCCCGGAGAGGTGAAATTCAGCTGGACACAAAAAT...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGGCTGACCACCTTATGTaGTGTCCACCACACCCTACC +
Preference number: 2 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWADHLM*CPPHPT
Trigger: GGTAGGGTGTGGTGGACATCACATAAGGTGGTCAGC...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGCCCCTGGCTTTCATCTaGCTCATCCTCGTCATTCAA +
Preference number: 2 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKPLAFI*LILVIQ
Trigger: TTGAATGACGAGGATGAGTCAGATGAAAGCCAGGGG...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGGGAGTACAAAACTGGTaGAGTGACATCTCTGAAAGG +
Preference number: 2 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRGVQNW*SDISER
Trigger: CCTTTCAGAGATGTCACTTCACCAGTTTTGTACTCC...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGTCCCAGCCCCATAGATaGTCTGTAAATTATTTGCTC +
Preference number: 2 (lower is better)
Translates to: RITYRLAVQMTWHVERRESQPHR*SVNYLL
Trigger: GAGCAAATAATTTACAGATCATCTATGGGGCTGGGA...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTGCCCTACAAGAGCAGTaGTCTCTTGCTCAGCAAGCA +
Preference number: 2 (lower is better)
Translates to: GVIALAVCLCPLVWLGTAALQEQ*SLAQQA
Trigger: TGCTTGCTGAGCAAGAGAGCACTGCTCTTGTAGGGC...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGCTTAGCCTCCCAAAGTaGTGGAATTACAGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGLSLPK*WNYSCE
Trigger: CTCACAGCTGTAATTCCAGCACTTTGGGAGGCTAAG...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGCACCTGCTGAAATGTTaGAGGAAACTTTCCCCTAGG +
Preference number: 2 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGHLLKC*RKLSPR
Trigger: CCTAGGGGAAAGTTTCCTGCAACATTTCAGCAGGTG...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GCTTTGTTAGGGGAAGTCCAAAGAAGCCTTTGGTCTAGGGACAATTTGACCTCACCTCACCTCTGCCCCTaGCTTTCATCTGACTCATCC +
Preference number: 2 (lower is better)
Translates to: ALLGEVQRSLWSRDNLTSPHLCP*LSSDSS
Trigger: GGATGAGTCAGATGAAAGCCAGGGGCAGAGGTGAGG...TGAGGTCAAATTGTCCCTAGACCAAAGGCTTCTTTGGACTTCCCCTAACAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACCTAACAGACCTGGCTTaGTTGAGTATTTGTTGGCTG +
Preference number: 2 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNLTDLA*LSICWL
Trigger: CAGCCAACAAATACTCAACCAAGCCAGGTCTGTTAG...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGGTTAGGTGGCTCCTCTaGCATAGATCCCATTTCTCC +
Preference number: 2 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKVRWLL*HRSHFS
Trigger: GGAGAAATGGGATCTATGCCAGAGGAGCCACCTAAC...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GATTGTTGCGCCACTTTCCTTAATAAGCCACTCGGTAACTGTAATACAGTTTCTCCTGGCTTCTGTGGCTaGCACTGCCACCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: DCCATFLNKPLGNCNTVSPGFCG*HCHLGS
Trigger: AGAGCCCAGGTGGCAGTGCCAGCCACAGAAGCCAGG...AGAAACTGTATTACAGTTACCGAGTGGCTTATTAAGGAAAGTGGCGCAACAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGGCTTGGTCTGTCAGTTaGAAACAACCTCAATGCGAT +
Preference number: 2 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRAWSVS*KQPQCD
Trigger: ATCGCATTGAGGTTGTTTCCAACTGACAGACCAAGC...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 90 bp AAGATGTTGTTGGAGTTAGTGAAGAGGAAGTCAGTGATGAGGGGCTaGGGACACAGGTTTTCTTACCACCACCTCCCAGTCCTTAGCAGA +
Preference number: 2 (lower is better)
Translates to: KMLLELVKRKSVMRG*GHRFSYHHLPVLSR
Trigger: TCTGCTAAGGACTGGGAGGTGGTGGTAAGAAAACCTGTGTCCCAAGCCCCTCATCACTGACTTCCTCTTCACTAACTCCAACAACATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CTACCAAGCTGCCCTAGAGCAGTGAGTCTGTATTATCTCCTGGCATTTTTCTCAGCTTGGCCTTCAGCTTaGTCTGCTTGGCTACAGCAT +
Preference number: 2 (lower is better)
Translates to: LPSCPRAVSLYYLLAFFSAWPSA*SAWLQH
Trigger: ATGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGC...TGAGAAAAATGCCAGGAGATAATACAGACTCACTGCTCTAGGGCAGCTTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGAGGCTTGCCTCCTCCTaGAGTTCAGGGTCAATTACC +
Preference number: 2 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWRLASS*SSGSIT
Trigger: GGTAATTGACCCTGAACTGCAGGAGGAGGCAAGCCT...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCTGGTTGAGTATTTGTTaGCTGTTAGCTACTTTTACC +
Preference number: 2 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTWLSIC*LLATFT
Trigger: GGTAAAAGTAGCTAACAGCCAACAAATACTCAACCA...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGTCCACTCCTTGGTTCTaGAATCTATATATTCCTGTT +
Preference number: 2 (lower is better)
Translates to: RITYRLAVQMTWHVERRESTPWF*NLYIPV
Trigger: AACAGGAATATATAGATTTCAGAACCAAGGAGTGGA...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CTACCAAGCTGCCCTAGAGCAGTGAGTCTGTATTATCTCCTGGCATTTTTCTCACAGTCCTTAGCAGAGTaGTTGGAACATAGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: LPSCPRAVSLYYLLAFFSQSLAE*LEHSRD
Trigger: GTCCCTGCTATGTTCCAAGCACTCTGCTAAGGACTG...TGAGAAAAATGCCAGGAGATAATACAGACTCACTGCTCTAGGGCAGCTTGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGTCCTTCCTAAAACCCTaGATAAGGTCCGCAGTTTTC +
Preference number: 2 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKSFLKP*IRSAVF
Trigger: GAAAACTGCGGACCTTATGCAGGGTTTTAGGAAGGA...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GATTGTTGCGCCACTTTCCTTAATAAGCCACTCGGTAACTGTAATACAGTTTCTGAAGGATGGGTCCCCTaGGCCTTCCCGTGGAACATA +
Preference number: 2 (lower is better)
Translates to: DCCATFLNKPLGNCNTVSEGWVP*AFPWNI
Trigger: TATGTTCCACGGGAAGGCCCAGGGGACCCATCCTTC...AGAAACTGTATTACAGTTACCGAGTGGCTTATTAAGGAAAGTGGCGCAACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 90 bp GTATGCTCCCATTTTAATGGGAGGAGGAGGAACTGTAATGACTCTTaGGGTTTCTGGGTATCAGACGTTAACTTGGACCCTGACGTATCC +
Preference number: 2 (lower is better)
Translates to: VCSHFNGRRRNCNDS*GFWVSDVNLDPDVS
Trigger: GGATACGTCAGGGTCCAAGTTAACGTCTGATACCCAGAAACCCAAAGAGTCATTACAGTTCCTCCTCCTCCCATTAAAATGGGAGCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCAGCATCTTATTTGTGTTaGACTCCCTCACCCTCTAGA +
Preference number: 2 (lower is better)
Translates to: FYHQILCLAFSLLCLATAASYLC*TPSPSR
Trigger: TCTAGAGGGTGAGGGAGTTCAACACAAATAAGATGC...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp CGAGACTCATCCCTGAAACATGGCACCTTCCATGTGGCTACTCTACTCCTTGGGTTTTCAAAAAGCATATaGTCCTCTCCTGTGGTTAGA +
Preference number: 2 (lower is better)
Translates to: RDSSLKHGTFHVATLLLGFSKSI*SSPVVR
Trigger: TCTAACCACAGGAGAGGATCATATGCTTTTTGAAAA...CCCAAGGAGTAGAGTAGCCACATGGAAGGTGCCATGTTTCAGGGATGAGTCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCACTCAGCCTGCAAATaGTGTCTTACCACCTACGTT +
Preference number: 2 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWHSACK*CLTTYV
Trigger: AACGTAGGTGGTAAGACAGCATTTGCAGGCTGAGTG...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTTGCCTCATATATCCATaGTGGCATGCTCCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPCLIYP*WHAPFP
Trigger: AGGGAAGGGAGCATGCCAGCATGGATATATGAGGCA...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGACCTTGCTCAGTTATTaGCTGGGAATTGCCAGAAAA +
Preference number: 2 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKTLLSY*LGIARK
Trigger: TTTTCTGGCAATTCCCAGCCAATAACTGAGCAAGGT...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GATTGTTGCGCCACTTTCCTTAATAAGCCACTCGGTAACTGTAATACAGTTTCTCAGGCTGGAGTGCAGTaGCATGATCAGGACTCACTG +
Preference number: 2 (lower is better)
Translates to: DCCATFLNKPLGNCNTVSQAGVQ*HDQDSL
Trigger: CAGTGAGTCCTGATCATGCCACTGCACTCCAGCCTG...AGAAACTGTATTACAGTTACCGAGTGGCTTATTAAGGAAAGTGGCGCAACAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTTACCACCTACGTTCGTaGGCCACTGGTACCAATTGT +
Preference number: 2 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPYHLRS*ATGTNC
Trigger: ACAATTGGTACCAGTGGCCCACGAACGTAGGTGGTA...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGGTCTGTATTATCTCCTaGCATTTTTCTCATGGTGTG +
Preference number: 2 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGVCIIS*HFSHGV
Trigger: CACACCATGAGAAAAATGCCAGGAGATAATACAGAC...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 90 bp AGGACGTCAATCCAACTCAGCAATAACCATGGAAGCCCACTGTCCTaGTCTCTTTTATCCACCCTTCCCATATTTGAGACACCCAAATCA +
Preference number: 2 (lower is better)
Translates to: RTSIQLSNNHGSPLS*SLLSTLPIFETPKS
Trigger: TGATTTGGGTGTCTCAAATATGGGAAGGGTGGATAAAAGAGACAAGGACAGTGGGCTTCCATGGTTATTGCTGAGTTGGATTGACGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 90 bp CCCTCAGAAAAGCATGCTCTCAATTTCCATAATTTAGTGAAATCATaGGCCACCAACCCCTCCTGTCTTGAGAATAGCGTGACCTCAGCT +
Preference number: 2 (lower is better)
Translates to: PSEKHALNFHNLVKS*ATNPSCLENSVTSA
Trigger: AGCTGAGGTCACGCTATTCTCAAGACAGGAGGGGTTGGTGGCCAATGATTTCACTAAATTATGGAAATTGAGAGCATGCTTTTCTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp GATTGTTGCGCCACTTTCCTTAATAAGCCACTCGGTAACTGTAATACAGTTTCTTTCCTCCCAAACTCCTaGTCAGCTGGCAGGCCATTT +
Preference number: 2 (lower is better)
Translates to: DCCATFLNKPLGNCNTVSFLPNS*SAGRPF
Trigger: AAATGGCCTGCCAGCTGATCAGGAGTTTGGGAGGAA...AGAAACTGTATTACAGTTACCGAGTGGCTTATTAAGGAAAGTGGCGCAACAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCACGTTCGTGGGCCACTaGTACCAATTGTGCCAATTT +
Preference number: 2 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSTFVGH*YQLCQF
Trigger: AAATTGGCACAATTGGTACCAGTGGCCCACGAACGT...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTATCAAATCCTGTGCTTaGCCTTCAGCTTGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPIKSCA*PSACSA
Trigger: AGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGAT...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTTATCAAGCGACCAGTTaGTCTTCACAGCCTCATCAG +
Preference number: 2 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPYQATS*SSQPHQ
Trigger: CTGATGAGGCTGTGAAGACCAACTGGTCGCTTGATA...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGAAACAAATTACTGCTTaGTCTGTCAGTTGGAAACAA +
Preference number: 2 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRKQITA*SVSWKQ
Trigger: TTGTTTCCAACTGACAGACCAAGCAGTAATTTGTTT...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGTACCAACTATTTCCATaGGACTTTACAGGTCAGGAC +
Preference number: 2 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWYQLFP*DFTGQD
Trigger: GTCCTGACCTGTAAAGTCTCATGGAAATAGTTGGTA...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGGTTCTTCATCACACTTaGCAATTTCAAGCATCTTAT +
Preference number: 2 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGVLHHT*QFQASY
Trigger: ATAAGATGCTTGAAATTGGCAAGTGTGATGAAGAAC...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTAGTGAAGGAGGGAAGTaGCATGAAATTTCCCTAGAT +
Preference number: 2 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPSEGGK*HEISLD
Trigger: ATCTAGGGAAATTTCATGTCACTTCCCTCCTTCACT...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCCTCACTAGGTTGCCATaGCTCGTCTTGAACTTCTGG +
Preference number: 2 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPILTRLP*LVLNFW
Trigger: CCAGAAGTTCAAGACGAGTCATGGCAACCTAGTGAG...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGTTTCTAACCTCTGTATaGTCCCATTTTAATGGGAGG +
Preference number: 2 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWFLTSV*SHFNGR
Trigger: CCTCCCATTAAAATGGGAGCATACAGAGGTTAGAAA...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCTTTATTGATACTATCTaGAGGGGATATCATCCAACT +
Preference number: 2 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSFIDTI*RGYHPT
Trigger: AGTTGGATGATATCCCCTCCAGATAGTATCAATAAA...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTCACCACTTCAAATCCTaGATAAAACTGACCATCCTT +
Preference number: 2 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPHHFKS*IKLTIL
Trigger: AAGGATGGTCAGTTTTATTCAGGATTTGAAGTGGTG...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCGGCATTTCAACATTTTaGTCACTCTTTCTAGGCTTC +
Preference number: 2 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSGISTF*SLFLGF
Trigger: GAAGCCTAGAAAGAGTGATCAAAATGTTGAAATGCC...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp GATTGTTGCGCCACTTTCCTTAATAAGCCACTCGGTAACTGTAATACAGTTTCTAATAAGTATACTGTGTaGAGGAGACGGTGGCACATC +
Preference number: 2 (lower is better)
Translates to: DCCATFLNKPLGNCNTVSNKYTV*RRRWHI
Trigger: GATGTGCCACCGTCTCCTGCACACAGTATACTTATT...AGAAACTGTATTACAGTTACCGAGTGGCTTATTAAGGAAAGTGGCGCAACAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCTGGATACAGCATCACTaGGTCTCAAAGTTCCGTGTC +
Preference number: 2 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPIWIQHH*VSKFRV
Trigger: GACACGGAACTTTGAGACCCAGTGATGCTGTATCCA...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGGTCATTTCATCTACTTaGTTGTTTAGTGCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWVISST*LFSASS
Trigger: AGAAGAGGCACTAAACAACCAAGTAGATGAAATGAC...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp GTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTTGTTGGCCACAAAAGACAATTTaGTTTTTGTGTCCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: VHSGRVNEIVKEVERCCWPQKTI*FLCPAE
Trigger: TTCAGCTGGACACAAAAATCAAATTGTCTTTTGTGG...CCAACAACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR TCA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTTTCTTGAAATTAGTTTaGTCCTTCCAAGGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPFLKLV*SFQGLS
Trigger: AGACAAGCCTTGGAAGGATCAAACTAATTTCAAGAA...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCACACCTTTTGCTTCATaGGGAAAGACCTTGGACACT +
Preference number: 2 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPITPFAS*GKTLDT
Trigger: AGTGTCCAAGGTCTTTCCCCATGAAGCAAAAGGTGT...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 90 bp GGAGTGATCTCTCTCAGTCCCCTGCTCATCAATTCTTGCTCACTTTaGATTATATATAAAGCCTTACCCTTGTTGATTAGTCAGCTCTTT +
Preference number: 2 (lower is better)
Translates to: GVISLSPLLINSCSL*IIYKALPLLISQLF
Trigger: AAAGAGCTGACTAATCAACAAGGGTAAGGCTTTATATATAATCAAAAGTGAGCAAGAATTGATGAGCAGGGGACTGAGAGAGATCACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCAGGCAATATTTATTATaGTTTACTGCCCTGATTGGA +
Preference number: 2 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSRQYLL*FTALIG
Trigger: TCCAATCAGGGCAGTAAACCATAATAAATATTGCCT...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR GCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCAGGACTGTTGTAGCCTaGAGTGTAGTAAACCTTCTC +
Preference number: 2 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCRTVVA*SVVNLL
Trigger: GAGAAGGTTTACTACACTGCAGGCTACAACAGTCCT...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000448741.5
3UTR GCA 72 bp ATCACTGGACAGCCTTCTTGTGCCAGGGACTGTCTGTaGCACCTATCCACCAGGGATGGGGGCCTCCGAGCC +
Preference number: 3 (lower is better)
Translates to: ITGQPSCARDCL*HLSTRDGGLRA
Trigger: GGCTCGGAGGCCCCCATCCCTGGTGGATAGGTGGCACAGACAGTCCCTGGCACAAGAAGGCTGTCCAGTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp CTCAGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTaGAGTACATGCTGCCAGGTTAGGTGGCTCCTCTGG +
Preference number: 3 (lower is better)
Translates to: LRIQSQEYAPGP*STCCQVRWLLW
Trigger: CCAGAGGAGCCACCTAACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp CCACCAGGGATGGGGGCCTCCGAGCCAGCCAGACAGTaGGTCACTCAGCCTGCAAATGCTGTCTTACCACCT +
Preference number: 3 (lower is better)
Translates to: PPGMGASEPARQ*VTQPANAVLPP
Trigger: AGGTGGTAAGACAGCATTTGCAGGCTGAGTGACTCACTGTCTGGCTGGCTCGGAGGCCCCCATCCCTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp CAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATaGTGCCAGGTTAGGTGGCTCCTCTGGCATAGATCC +
Preference number: 3 (lower is better)
Translates to: QSQEYAPGPCST*CQVRWLLWHRS
Trigger: GGATCTATGCCAGAGGAGCCACCTAACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp AGAGGAAGCAGGACGAGGCAGGGAGAGCAGGCGAGCTaGCATCCCAGGGGAACTCTGGGAAAAAGGTCACTC +
Preference number: 3 (lower is better)
Translates to: RGSRTRQGEQAS*HPRGTLGKRSL
Trigger: GAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCCTGCTCTCCCTGCCTCGTCCTGCTTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp GGCCTCCGAGCCAGCCAGACAGTGAGTCACTCAGCCTaGAAATGCTGTCTTACCACCTACGTTCGTGGGCCA +
Preference number: 3 (lower is better)
Translates to: GLRASQTVSHSA*KCCLTTYVRGP
Trigger: TGGCCCACGAACGTAGGTGGTAAGACAGCATTTGCAGGCTGAGTGACTCACTGTCTGGCTGGCTCGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp TCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATGCTaGCAGGTTAGGTGGCTCCTCTGGCATAGATCCCAT +
Preference number: 3 (lower is better)
Translates to: SQEYAPGPCSTC*QVRWLLWHRSH
Trigger: ATGGGATCTATGCCAGAGGAGCCACCTAACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp GCCCCTGGCCCCTGCAGTACATGCTGCCAGGTTAGGTaGCTCCTCTGGCATAGATCCCATTTCTCCCTCATC +
Preference number: 3 (lower is better)
Translates to: APGPCSTCCQVR*LLWHRSHFSLI
Trigger: GATGAGGGAGAAATGGGATCTATGCCAGAGGAGCCACCTAACCTGGCAGCATGTACTGCAGGGGCCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCGTACCATGGCCTTGCTaGGTCTTTGGCAAGAGGGCC +
Preference number: 3 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSAVPWPC*VFGKRA
Trigger: GGCCCTCTTGCCAAAGACCAAGCAAGGCCATGGTAC...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp GGTGCCTCCAGTGGGTCCGCTAAGTTCCACACACATTaGTCTCGCCACTATCCTCTGACAGCAGGCTTGCCT +
Preference number: 3 (lower is better)
Translates to: GASSGSAKFHTH*SRHYPLTAGLP
Trigger: AGGCAAGCCTGCTGTCAGAGGATAGTGGCGAGAGCAATGTGTGTGGAACTTAGCGGACCCACTGGAGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp GCTAAGGTGGATCCTGGTGAAGTAGCAGCTGGTGGCTaGCAGCTACCCACACTCCTTGCAGCTGGATGGCAT +
Preference number: 3 (lower is better)
Translates to: AKVDPGEVAAGG*QLPTLLAAGWH
Trigger: ATGCCATCCAGCTGCAAGGAGTGTGGGTAGCTGGCAGCCACCAGCTGCTACTTCACCAGGATCCACCTTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp TTTCTCCCCACCCACCACTGGCACCCTGCTCTGTGGTaGCATCTTAGGAGGAGAGGGGAAAGAGTGGCTTTC +
Preference number: 3 (lower is better)
Translates to: FLPTHHWHPALW*HLRRRGERVAF
Trigger: GAAAGCCACTCTTTCCCCTCTCCTCCTAAGATGCCACCACAGAGCAGGGTGCCAGTGGTGGGTGGGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp CGAGCCAGCCAGACAGTGAGTCACTCAGCCTGCAAATaGTGTCTTACCACCTACGTTCGTGGGCCACTGGTA +
Preference number: 3 (lower is better)
Translates to: RASQTVSHSACK*CLTTYVRGPLV
Trigger: TACCAGTGGCCCACGAACGTAGGTGGTAAGACAGCATTTGCAGGCTGAGTGACTCACTGTCTGGCTGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp TCTGGCTTCCCTCTCCCTGCTTTGCTGCCTAGAAACTaGCTCCAGGCCATTCGCCTGAGCAATCACTGGACT +
Preference number: 3 (lower is better)
Translates to: SGFPLPALLPRN*LQAIRLSNHWT
Trigger: AGTCCAGTGATTGCTCAGGCGAATGGCCTGGAGGCAGTTTCTAGGCAGCAAAGCAGGGAGAGGGAAGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp ACTGTCGGCGAACCACACCCCTCACAGCTGGGCGGCTaGTACTTTCTTGAAGGTGAATTTGAGTGGCACACC +
Preference number: 3 (lower is better)
Translates to: TVGEPHPSQLGG*YFLEGEFEWHT
Trigger: GGTGTGCCACTCAAATTCACCTTCAAGAAAGTACCAGCCGCCCAGCTGTGAGGGGTGTGGTTCGCCGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp GATGGCACCCTGGCTTCTGTGGCTGGCACTGCCACCTaGGCTCTTCAAGGTCTCATCATCATCCACATTGCT +
Preference number: 3 (lower is better)
Translates to: DGTLASVAGTAT*ALQGLIIIHIA
Trigger: AGCAATGTGGATGATGATGAGACCTTGAAGAGCCCAGGTGGCAGTGCCAGCCACAGAAGCCAGGGTGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp GACCAGGGTTGCTGCACTAGTCCATTCAGTTACAACTaGGCAAGGAGTACAGAGGGTGCCTCCAGTGGGTCC +
Preference number: 3 (lower is better)
Translates to: DQGCCTSPFSYN*ARSTEGASSGS
Trigger: GGACCCACTGGAGGCACCCTCTGTACTCCTTGCCCAGTTGTAACTGAATGGACTAGTGCAGCAACCCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGATGAGGCCAGGGGCCTaGTCTGTGGTGTTCACAGTG +
Preference number: 3 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRMRPGA*SVVFTV
Trigger: CACTGTGAACACCACAGACAAGGCCCCTGGCCTCAT...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGCACTGGACAGCCTTCTaGTGCCAGGGACTGTCTGTG +
Preference number: 3 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRHWTAF*CQGLSV
Trigger: CACAGACAGTCCCTGGCACAAGAAGGCTGTCCAGTG...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCATAAACCCAGCCCCTTaGACCAAGCACCCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTINPAP*TKHPQD
Trigger: ATCCTGAGGGTGCTTGGTCAAAGGGGCTGGGTTTAT...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp TTTGCTACGATGCAGATTCAGGTCTGGGGTGGGGCCTaGGAGTGTATTTCCTCCGAGCTCCCACATCCATGC +
Preference number: 3 (lower is better)
Translates to: FATMQIQVWGGA*ECISSELPHPC
Trigger: GCATGGATGTGGGAGCTCGGAGGAAATACACTCTCAGGCCCCACCCCAGACCTGAATCTGCATCGTAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453452.1
3UTR GCA 72 bp ACACCTTCACTCAACCAAGGACTCCAGGGGACCCACTaGAGATCTACAGCACTCTCTGTCTGTGTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: TPSLNQGLQGTH*RSTALSVCVLL
Trigger: CAGCAGCACACAGACAGAGAGTGCTGTAGATCTGCAGTGGGTCCCCTGGAGTCCTTGGTTGAGTGAAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp GAGCTCCTGGGAGCCAAACCCTTCTCAGACCAGGGTTaGTGCACTAGTCCATTCAGTTACAACTGGGCAAGG +
Preference number: 3 (lower is better)
Translates to: ELLGAKPFSDQG*CTSPFSYNWAR
Trigger: CCTTGCCCAGTTGTAACTGAATGGACTAGTGCAGCAACCCTGGTCTGAGAAGGGTTTGGCTCCCAGGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp AGTAGCAGCTGGTGGCTGCCAGCTACCCACACTCCTTaGAGCTGGATGGCATATCTTGTCTTGAAGGGGGAT +
Preference number: 3 (lower is better)
Translates to: SSSWWLPATHTP*SWMAYLVLKGD
Trigger: ATCCCCCTTCAAGACAAGATATGCCATCCAGCTGCAAGGAGTGTGGGTAGCTGGCAGCCACCAGCTGCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp GGTCCCTCTCTCCCACAGAATAGTGTGTCCTTATCTTaGAATCTGGCGTGGACCCTGAAGACGGTAACGGGG +
Preference number: 3 (lower is better)
Translates to: GPSLPQNSVSLS*NLAWTLKTVTG
Trigger: CCCCGTTACCGTCTTCAGGGTCCACGCCAGATTTCAAGATAAGGACACACTATTCTGTGGGAGAGAGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp TGGGTCCCCTGGGCCTTCCCGTGGAACATAATTGTCTaGTGGGTCACCTTGCCTCATATATCCATGCTGGCA +
Preference number: 3 (lower is better)
Translates to: WVPWAFPWNIIV*WVTLPHISMLA
Trigger: TGCCAGCATGGATATATGAGGCAAGGTGACCCATCAGACAATTATGTTCCACGGGAAGGCCCAGGGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp CAAGGTCTCATCATCATCCACATTGCTCTCAGCAAGTaGAGTTCCATCACAGCCCTTCCTGCCAGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: QGLIIIHIALSK*SSITALPASPS
Trigger: GCTGGGGCTGGCAGGAAGGGCTGTGATGGAACTTCACTTGCTGAGAGCAATGTGGATGATGATGAGACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp CTCCTGGGAGCCAAACCCTTCTCAGACCAGGGTTGCTaGACTAGTCCATTCAGTTACAACTGGGCAAGGAGT +
Preference number: 3 (lower is better)
Translates to: LLGAKPFSDQGC*TSPFSYNWARS
Trigger: ACTCCTTGCCCAGTTGTAACTGAATGGACTAGTGCAGCAACCCTGGTCTGAGAAGGGTTTGGCTCCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCGAAAAAGGTCACTCATaGGAGGAGTCCTGTGTTGGA +
Preference number: 3 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSAEKGHS*EESCVG
Trigger: TCCAACACAGGACTCCTCCAATGAGTGACCTTTTTC...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp TGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCTaGACTGTGATTCTCTCATTGGGCCTTGTCATCTAT +
Preference number: 3 (lower is better)
Translates to: WLEPPSFRAPGT*TVILSLGLVIY
Trigger: ATAGATGACAAGGCCCAATGAGAGAATCACAGTGCAGGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp CCTGAGGGACACCTTTTGCTTCATGGGGAAAGACCTTaGACACTGTCTTCCCTTGTGTTAGGGAAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: PEGHLLLHGERP*TLSSLVLGKRQ
Trigger: CTGCCTCTTCCCTAACACAAGGGAAGACAGTGTCCAAGGTCTTTCCCCATGAAGCAAAAGGTGTCCCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp CAGTTAGGTCCTTGTACCATGGCCTTGCTTGGTCTTTaGCAAGAGGGCCCCCTCAGAAAAGCATGCTCTCAA +
Preference number: 3 (lower is better)
Translates to: QLGPCTMALLGL*QEGPLRKACSQ
Trigger: TTGAGAGCATGCTTTTCTGAGGGGGCCCTCTTGCCAAAGACCAAGCAAGGCCATGGTACAAGGACCTAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp ACAGGGAGAGAAGAATCGAGACTCATCCCTGAAACATaGCACCTTCCATGTGGCTACTCTACTCCTTGGGGC +
Preference number: 3 (lower is better)
Translates to: TGREESRLIPET*HLPCGYSTPWG
Trigger: GCCCCAAGGAGTAGAGTAGCCACATGGAAGGTGCCATGTTTCAGGGATGAGTCTCGATTCTTCTCTCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGAAGGGAAAAGCAGGATaGAGCAGAGGAACGGTAGGA +
Preference number: 3 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRKGKAG*SRGTVG
Trigger: TCCTACCGTTCCTCTGCTCAATCCTGCTTTTCCCTT...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGCAGCATTGGTATTTGTaGCAGGCAGGTTGGATAGTC +
Preference number: 3 (lower is better)
Translates to: RITYRLAVQMTWHVERREQHWYL*QAGWIV
Trigger: GACTATCCAACCTGCCTGCAACAAATACCAATGCTG...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGTCCTTAGCAGAGTGCTaGGAACATAGCAGGGACTCC +
Preference number: 3 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGSLAEC*EHSRDS
Trigger: GGAGTCCCTGCTATGTTCCAAGCACTCTGCTAAGGA...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCAAGAGCAGTGCTCTCTaGCTCAGCAAGCAGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSKSSAL*LSKQCV
Trigger: CACACACTGCTTGCTGAGCAAGAGAGCACTGCTCTT...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp CAGCAAGCAGTGTGTGCAGCTTTTTGTTCTGGGTACTaGACGTGGCCTCTCCCTTTAACACTGTCACCTCTG +
Preference number: 3 (lower is better)
Translates to: QQAVCAAFCSGY*TWPLPLTLSPL
Trigger: CAGAGGTGACAGTGTTAAAGGGAGAGGCCACGTTCAGTACCCAGAACAAAAAGCTGCACACACTGCTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp TGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCATaGGATGAGGATTGTTGGCAAGCTACCACAGAGACT +
Preference number: 3 (lower is better)
Translates to: CLAFSLLCLATA*DEDCWQATTET
Trigger: AGTCTCTGTGGTAGCTTGCCAACAATCCTCATCTCATGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp CCACTGTGCAGACATGGCGGTTGGAGTAATTGCTCTTaGAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAAC +
Preference number: 3 (lower is better)
Translates to: PLCRHGGWSNCS*SLLMSSGLAWN
Trigger: GTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCCAACCGCCATGTCTGCACAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp CTGGGCGGCTGGTACTTTCTTGAAGGTGAATTTGAGTaGCACACCTCACGTTGTCTGCCACCACTTCAAATC +
Preference number: 3 (lower is better)
Translates to: LGGWYFLEGEFE*HTSRCLPPLQI
Trigger: GATTTGAAGTGGTGGCAGACAACGTGAGGTGTGCCACTCAAATTCACCTTCAAGAAAGTACCAGCCGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp CTCAGCCTGCAAATGCTGTCTTACCACCTACGTTCGTaGGCCACTGGTACCAATTGTGCCAATTTTAGGCTG +
Preference number: 3 (lower is better)
Translates to: LSLQMLSYHLRS*ATGTNCANFRL
Trigger: CAGCCTAAAATTGGCACAATTGGTACCAGTGGCCCACGAACGTAGGTGGTAAGACAGCATTTGCAGGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp ACCCAACAGAGGAGGTGGAACATCACAGACACTGGATaGCACCATCTACAAGGGCACGTGGAAAAACAAGTC +
Preference number: 3 (lower is better)
Translates to: TQQRRWNITDTG*HHLQGHVEKQV
Trigger: GACTTGTTTTTCCACGTGCCCTTGTAGATGGTGCCATCCAGTGTCTGTGATGTTCCACCTCCTCTGTTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp GACAACCCAACAGAGGAGGTGGAACATCACAGACACTaGATGGCACCATCTACAAGGGCACGTGGAAAAACA +
Preference number: 3 (lower is better)
Translates to: DNPTEEVEHHRH*MAPSTRARGKT
Trigger: TGTTTTTCCACGTGCCCTTGTAGATGGTGCCATCCAGTGTCTGTGATGTTCCACCTCCTCTGTTGGGTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCGCGGCTGGTACTTTCTaGAAGGTGAATTTGAGTGGC +
Preference number: 3 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSAAGTF*KVNLSG
Trigger: GCCACTCAAATTCACCTTCAAGAAAGTACCAGCCGC...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp CTACCAAGCTGCCCTAGAGCAGTGAGTCTGTATTATCTCCTGGCATTTTTCTCATGCTTGGCCTTCAGCTaGCTCTGCTTGGCTACAGCA +
Preference number: 3 (lower is better)
Translates to: LPSCPRAVSLYYLLAFFSCLAFS*LCLATA
Trigger: TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCA...TGAGAAAAATGCCAGGAGATAATACAGACTCACTGCTCTAGGGCAGCTTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp TTTCTTTATCCGAGAGACCGTGCCCTACAAGAGCAGTaGTCTCTTGCTCAGCAAGCAGTGTGTGCAGCTTTT +
Preference number: 3 (lower is better)
Translates to: FLYPRDRALQEQ*SLAQQAVCAAF
Trigger: AAAAGCTGCACACACTGCTTGCTGAGCAAGAGAGCACTGCTCTTGTAGGGCACGGTCTCTCGGATAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp AATCATGCTAATCAGCAGCGGCCTCACTCTGGTAACTaGATCCCCACAACTAAAGCTCCCTCGACTCCTAAA +
Preference number: 3 (lower is better)
Translates to: NHANQQRPHSGN*IPTTKAPSTPK
Trigger: TTTAGGAGTCGAGGGAGCTTTAGTTGTGGGGATGCAGTTACCAGAGTGAGGCCGCTGCTGATTAGCATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp AGACACCCAAATCACCCACCAGTCATTGCGTTCCCCTaGACCAGCATGCCATTTCATCTGAAGTCTTCATCA +
Preference number: 3 (lower is better)
Translates to: RHPNHPPVIAFP*TSMPFHLKSSS
Trigger: TGATGAAGACTTCAGATGAAATGGCATGCTGGTGCAGGGGAACGCAATGACTGGTGGGTGATTTGGGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp CCCATATTTGAGACACCCAAATCACCCACCAGTCATTaGGTTCCCCTGCACCAGCATGCCATTTCATCTGAA +
Preference number: 3 (lower is better)
Translates to: PIFETPKSPTSH*VPLHQHAISSE
Trigger: TTCAGATGAAATGGCATGCTGGTGCAGGGGAACGCAATGACTGGTGGGTGATTTGGGTGTCTCAAATATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp CCCATGTTGGTGGGTTCCATCCATAGCCTCCATCTTTaGCACCACTGCCACTTTATGTGTGCATTTTACCAG +
Preference number: 3 (lower is better)
Translates to: PMLVGSIHSLHL*HHCHFMCAFYQ
Trigger: CTGGTAAAATGCACACATAAAGTGGCAGTGGTGGCAAAGATGGAGGCTATGGATGGAACCCACCAACATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp TTGTCTGATGGGTCACCTTGCCTCATATATCCATGCTaGCATGCTCCCTTCCCTGAGCCTTCTCATTCCTTT +
Preference number: 3 (lower is better)
Translates to: LSDGSPCLIYPC*HAPFPEPSHSF
Trigger: AAAGGAATGAGAAGGCTCAGGGAAGGGAGCATGCCAGCATGGATATATGAGGCAAGGTGACCCATCAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp GGGAGGAGGAGGAACTGTAATGACTCTTTGGGTTTCTaGGTATCAGACGTTAACTTGGACCCTGACGTATCC +
Preference number: 3 (lower is better)
Translates to: GRRRNCNDSLGF*VSDVNLDPDVS
Trigger: GGATACGTCAGGGTCCAAGTTAACGTCTGATACCCAGAAACCCAAAGAGTCATTACAGTTCCTCCTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp CAGTTGGTCTTCACAGCCTCATCAGGGTCTCAGCATTaGTATTTGTTGCAGGCAGGTTGGATAGTCACAGTG +
Preference number: 3 (lower is better)
Translates to: QLVFTASSGSQH*YLLQAGWIVTV
Trigger: CACTGTGACTATCCAACCTGCCTGCAACAAATACCAATGCTGAGACCCTGATGAGGCTGTGAAGACCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp ATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTaGCATGTGGAGAGACGTGAGAACTTCTTACAGGCA +
Preference number: 3 (lower is better)
Translates to: IRITYRLAVQMT*HVERRENFLQA
Trigger: TGCCTGTAAGAAGTTCTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp CAGGACCCCTCGGCTGCCATTTGGAGCTTAGTGGTTAACAGGATACTGATGGCAAAAACTGACCATCCTTaGGCCACAGTAGCAATTAAG +
Preference number: 3 (lower is better)
Translates to: QDPSAAIWSLVVNRILMAKTDHP*ATVAIK
Trigger: CTTAATTGCTACTGTGGCCAAAGGATGGTCAGTTTT...TGCCATCAGTATCCTGTTAACCACTAAGCTCCAAATGGCAGCCGAGGGGTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGTCTTATACCACCACCTaGCTCAGTTATTGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKSYTTT*LSYWLG
Trigger: TCCCAGCCAATAACTGAGCAAGGTGGTGGTATAAGA...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCCTGAGGGACACCTTTaGCTTCATGGGGAAAGACCT +
Preference number: 3 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWPEGHL*LHGERP
Trigger: AGGTCTTTCCCCATGAAGCAAAAGGTGTCCCTCAGG...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGTCATTCCTTTCTCTATaGTTTGTCCCAGCCATTCAG +
Preference number: 3 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRSFLSL*FVPAIQ
Trigger: CTGAATGGCTGGGACAAACAATAGAGAAAGGAATGA...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp CATTCAAGTCTCAACTGTCTCTTGAGAGGCCTTTGCTaGCCACCTTATGTGATGTCCACCACACCCTACCTA +
Preference number: 3 (lower is better)
Translates to: HSSLNCLLRGLC*PPYVMSTTPYL
Trigger: TAGGTAGGGTGTGGTGGACATCACATAAGGTGGTCAGCAAAGGCCTCTCAAGAGACAGTTGAGACTTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp CACCACTGCCACTTTATGTGTGCATTTTACCAGCACTaGGGTGGGCACTGGCAAAAGCTAATAGAACAGGCT +
Preference number: 3 (lower is better)
Translates to: HHCHFMCAFYQH*GGHWQKLIEQA
Trigger: AGCCTGTTCTATTAGCTTTTGCCAGTGCCCACCTCAGTGCTGGTAAAATGCACACATAAAGTGGCAGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp GTAAAGACAAGGAGGCCCAAAGATAGAAAACGTGGTTaGGCTATCAGTGAGGGGCATGATCCTACTGCCAGT +
Preference number: 3 (lower is better)
Translates to: VKTRRPKDRKRG*AISEGHDPTAS
Trigger: ACTGGCAGTAGGATCATGCCCCTCACTGATAGCTCAACCACGTTTTCTATCTTTGGGCCTCCTTGTCTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp GGTAACTGTAATACAGTTTCTCTCAGTTGCCTGCTCTaGCCTACCTTCCACAGCGGCCAGCCTTTATTCACA +
Preference number: 3 (lower is better)
Translates to: GNCNTVSLSCLL*PTFHSGQPLFT
Trigger: TGTGAATAAAGGCTGGCCGCTGTGGAAGGTAGGTCAGAGCAGGCAACTGAGAGAAACTGTATTACAGTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp ATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTaGCTACAGCATGAGATGAGGATTGTTGGCAAGCTA +
Preference number: 3 (lower is better)
Translates to: IKSCAWPSACSA*LQHEMRIVGKL
Trigger: TAGCTTGCCAACAATCCTCATCTCATGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp CTGGGAAAAAGGTCACTCATTGGAGGAGTCCTGTGTTaGACTGAAACAGTTAGGTCCTTGTACCATGGCCTT +
Preference number: 3 (lower is better)
Translates to: LGKRSLIGGVLC*TETVRSLYHGL
Trigger: AAGGCCATGGTACAAGGACCTAACTGTTTCAGTCCAACACAGGACTCCTCCAATGAGTGACCTTTTTCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp TCACAGACACTGGATGGCACCATCTACAAGGGCACGTaGAAAAACAAGTCCACATCGTGTCCTATGGACTTT +
Preference number: 3 (lower is better)
Translates to: SQTLDGTIYKGT*KNKSTSCPMDF
Trigger: AAAGTCCATAGGACACGATGTGGACTTGTTTTTCCACGTGCCCTTGTAGATGGTGCCATCCAGTGTCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGGGAAGCCCACTGTCCTaGTCTCTTTTATCCACCCTT +
Preference number: 3 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWGSPLS*SLLSTL
Trigger: AAGGGTGGATAAAAGAGACAAGGACAGTGGGCTTCC...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGGGCTTGGTTGAGTATTaGTTGGCTGTTAGCTACTTT +
Preference number: 3 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGGLVEY*LAVSYF
Trigger: AAAGTAGCTAACAGCCAACAAATACTCAACCAAGCC...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGACAGACCTGGCTTGGTaGAGTATTTGTTGGCTGTTA +
Preference number: 3 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGTDLAW*SICWLL
Trigger: TAACAGCCAACAAATACTCAACCAAGCCAGGTCTGT...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGGGAGGTGGAAAGATGTaGTTGGAGTTAGTGAAGAGG +
Preference number: 3 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWGGGKM*LELVKR
Trigger: CCTCTTCACTAACTCCAACAACATCTTTCCACCTCC...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTCATGGGGAAAGACCTaGGACACTGTCTTCCCTTGT +
Preference number: 3 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSSWGKT*DTVFPC
Trigger: ACAAGGGAAGACAGTGTCCAAGGTCTTTCCCCATGA...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp CAGGACCCCTCGGCTGCCATTTGGAGCTTAGTGGTTAACAGGATACTGATGGCAAGGCATTTCAACATTTaGATCACTCTTTCTAGGCTT +
Preference number: 3 (lower is better)
Translates to: QDPSAAIWSLVVNRILMARHFNI*ITLSRL
Trigger: AAGCCTAGAAAGAGTGATCAAAATGTTGAAATGCCT...TGCCATCAGTATCCTGTTAACCACTAAGCTCCAAATGGCAGCCGAGGGGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp ACTGTCCTTGTCTCTTTTATCCACCCTTCCCATATTTaGGACACCCAAATCACCCACCAGTCATTGCGTTCC +
Preference number: 3 (lower is better)
Translates to: TVLVSFIHPSHI*DTQITHQSLRS
Trigger: GGAACGCAATGACTGGTGGGTGATTTGGGTGTCTCAAATATGGGAAGGGTGGATAAAAGAGACAAGGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp GATGTGAGGATGTTGTTGGGGGAATGGAGGGTCATTTaGATGAAACATGGACCTGATTGTTGCGCCACTTTC +
Preference number: 3 (lower is better)
Translates to: DVRMLLGEWRVI*MKHGPDCCATF
Trigger: GAAAGTGGCGCAACAATCAGGTCCATGTTTCATTCAAATGACCCTCCATTCCCCCAACAACATCCTCACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp GTGGGGGTGACTGTATATTCCTTAGGAGAATCACAGTaGAAAGGAGACGTTTCTGTGTCTCCGTCTTTCTCC +
Preference number: 3 (lower is better)
Translates to: VGVTVYSLGESQ*KGDVSVSPSFS
Trigger: GGAGAAAGACGGAGACACAGAAACGTCTCCTTTTCACTGTGATTCTCCTAAGGAATATACAGTCACCCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp ATGAAATACAGGGAGAGAAGAATCGAGACTCATCCCTaGAACATGGCACCTTCCATGTGGCTACTCTACTCC +
Preference number: 3 (lower is better)
Translates to: MKYRERRIETHP*NMAPSMWLLYS
Trigger: GGAGTAGAGTAGCCACATGGAAGGTGCCATGTTTCAGGGATGAGTCTCGATTCTTCTCTCCCTGTATTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp TTGTTGGCTGTTAGCTACTTTTACCATCAAATCCTGTaGTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCA +
Preference number: 3 (lower is better)
Translates to: LLAVSYFYHQIL*LAFSLLCLATA
Trigger: TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAAGTAGCTAACAGCCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp GAGGGACAGGTAAATTGGGTTCCCAATTCATCATCATaGCCAGAAGCAGATGTTCACCCGAGGTGCTTAAAA +
Preference number: 3 (lower is better)
Translates to: EGQVNWVPNSSS*PEADVHPRCLK
Trigger: TTTTAAGCACCTCGGGTGAACATCTGCTTCTGGCCATGATGATGAATTGGGAACCCAATTTACCTGTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp GTAGGACCAACTATAGCACCTTCCTGCAAATGGTTTTaGAACCACAACTGGTCCTCATTACTCCCTGCTTCA +
Preference number: 3 (lower is better)
Translates to: VGPTIAPSCKWF*NHNWSSLLPAS
Trigger: TGAAGCAGGGAGTAATGAGGACCAGTTGTGGTTCCAAAACCATTTGCAGGAAGGTGCTATAGTTGGTCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTAGTGTGTGCAGCTTTTaGTTCTGGGTACTGAACGTG +
Preference number: 3 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPSVCSF*FWVLNV
Trigger: CACGTTCAGTACCCAGAACAAAAAGCTGCACACACT...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCTTCCCTCTCCCTGCTTaGCTGCCTAGAAACTGCCTC +
Preference number: 3 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPIFPLPA*LPRNCL
Trigger: GAGGCAGTTTCTAGGCAGCAAAGCAGGGAGAGGGAA...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGAATTTAGTGAAATCATaGGCCACCAACCCCTCCTGT +
Preference number: 3 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWNLVKS*ATNPSC
Trigger: ACAGGAGGGGTTGGTGGCCAATGATTTCACTAAATT...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp CTCTTTCTAGGCTTCTACCAAGCTGCCCTAGAGCAGTaGGTCTGTATTATCTCCTGGCATTTTTCTCATGGT +
Preference number: 3 (lower is better)
Translates to: LFLGFYQAALEQ*VCIISWHFSHG
Trigger: ACCATGAGAAAAATGCCAGGAGATAATACAGACTCACTGCTCTAGGGCAGCTTGGTAGAAGCCTAGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp CCTGTTGGAGGACTCCACCTGATGACCCATGCATTATaGGTTATTTCTACTCTGGCTAGTGGAAACACAAAC +
Preference number: 3 (lower is better)
Translates to: PVGGLHLMTHAL*VISTLASGNTN
Trigger: GTTTGTGTTTCCACTAGCCAGAGTAGAAATAACTCATAATGCATGGGTCATCAGGTGGAGTCCTCCAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp GTAAGTGGGGTCACTCCTGCCTCCACTCCTTGGTTCTaGAATCTATATATTCCTGTTGTAGACACAGCATCA +
Preference number: 3 (lower is better)
Translates to: VSGVTPASTPWF*NLYIPVVDTAS
Trigger: TGATGCTGTGTCTACAACAGGAATATATAGATTTCAGAACCAAGGAGTGGAGGCAGGAGTGACCCCACTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp ACTTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTaGTCTGCTTGGCTACAGCATGAGATGAGGATTGTT +
Preference number: 3 (lower is better)
Translates to: TFTIKSCAWPSA*SAWLQHEMRIV
Trigger: AACAATCCTCATCTCATGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp GCAGTGAGTCTGTATTATCTCCTGGCATTTTTCTCATaGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCA +
Preference number: 3 (lower is better)
Translates to: AVSLYYLLAFFS*CEILYPESPKS
Trigger: TGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAAAAATGCCAGGAGATAATACAGACTCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp TGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTaGAACTGCTCCTGTACATATCATTTCCATCTTCCA +
Preference number: 3 (lower is better)
Translates to: CSCSLLMSSGLA*NCSCTYHFHLP
Trigger: TGGAAGATGGAAATGATATGTACAGGAGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp TGGGGAGAGAAACAAATTACTGCTTGGTCTGTCAGTTaGAAACAACCTCAATGCGATCTGCTTTCTGCCATC +
Preference number: 3 (lower is better)
Translates to: WGEKQITAWSVS*KQPQCDLLSAI
Trigger: GATGGCAGAAAGCAGATCGCATTGAGGTTGTTTCCAACTGACAGACCAAGCAGTAATTTGTTTCTCTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGTTGGTTGAGTATTTGTaGGCTGTTAGCTACTTTTAC +
Preference number: 3 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKLVEYL*AVSYFY
Trigger: GTAAAAGTAGCTAACAGCCAACAAATACTCAACCAA...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCTTTCTTGAAATTAGTTaGATCCTTCCAAGGCTTGTC +
Preference number: 3 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSFLEIS*ILPRLV
Trigger: GACAAGCCTTGGAAGGATCAAACTAATTTCAAGAAA...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp CACAGGTCAAGGAACAAATGTAGGGGTTATTCTGCCTaGCAAGGATGTCAGTCTCAATTATACATTCAGGGA +
Preference number: 3 (lower is better)
Translates to: HRSRNKCRGYSA*QGCQSQLYIQG
Trigger: TCCCTGAATGTATAATTGAGACTGACATCCTTGGCAGGCAGAATAACCCCTACATTTGTTCCTTGACCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp AAGAGGAGTTTGGTAGGACCAACTATAGCACCTTCCTaGAAATGGTTTTGGAACCACAACTGGTCCTCATTA +
Preference number: 3 (lower is better)
Translates to: KRSLVGPTIAPS*KWFWNHNWSSL
Trigger: TAATGAGGACCAGTTGTGGTTCCAAAACCATTTGCAGGAAGGTGCTATAGTTGGTCCTACCAAACTCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp TTGGGGAGATCCACTAAATGCTCCCATCCCATGTTTTaGGATCCCAAGTTTGATTCCAACCTTGATCTAACA +
Preference number: 3 (lower is better)
Translates to: LGRSTKCSHPMF*DPKFDSNLDLT
Trigger: TGTTAGATCAAGGTTGGAATCAAACTTGGGATCCCAAAACATGGGATGGGAGCATTTAGTGGATCTCCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp GTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTaGCTTGGAACTGCTCCTGTACATATCATTTCCATC +
Preference number: 3 (lower is better)
Translates to: VIALAVCLCPLV*LGTAPVHIISI
Trigger: GATGGAAATGATATGTACAGGAGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp TATTCCTGTTGTAGACACAGCATCATACAGGCTTTCTaGTTCAATAAGTATACTGTGTGCAGGAGACGGTGG +
Preference number: 3 (lower is better)
Translates to: YSCCRHSIIQAF*FNKYTVCRRRW
Trigger: CCACCGTCTCCTGCACACAGTATACTTATTGAATCAGAAAGCCTGTATGATGCTGTGTCTACAACAGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp CTCAATGCGATCTGCTTTCTGCCATCCTACTATTTCTaGAGAATCTTGATTGAACTCTTGCTTTTCCTGTGG +
Preference number: 3 (lower is better)
Translates to: LNAICFLPSYYF*RILIELLLFLW
Trigger: CCACAGGAAAAGCAAGAGTTCAATCAAGATTCTTCAGAAATAGTAGGATGGCAGAAAGCAGATCGCATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp CTTGATCTAACAGACCTGGCTTGGTTGAGTATTTGTTaGCTGTTAGCTACTTTTACCATCAAATCCTGTGCT +
Preference number: 3 (lower is better)
Translates to: LDLTDLAWLSIC*LLATFTIKSCA
Trigger: AGCACAGGATTTGATGGTAAAAGTAGCTAACAGCCAACAAATACTCAACCAAGCCAGGTCTGTTAGATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp GATTGTTGCGCCACTTTCCTTAATAAGCCACTCGGTAACTGTAATACAGTTTCTAACTGTAATGACTCTTaGGGTTTCTGGGTATCAGAC +
Preference number: 3 (lower is better)
Translates to: DCCATFLNKPLGNCNTVSNCNDS*GFWVSD
Trigger: GTCTGATACCCAGAAACCCAAAGAGTCATTACAGTT...AGAAACTGTATTACAGTTACCGAGTGGCTTATTAAGGAAAGTGGCGCAACAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp TTCTCTGGTGGGTGCTATCTAGTGGGCATTAACATGTaGTACAGTTTTTCAACTTCTGTGTTCACTCCATAT +
Preference number: 3 (lower is better)
Translates to: FSGGCYLVGINM*YSFSTSVFTPY
Trigger: ATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGCCCACTAGATAGCACCCACCAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR GCA 72 bp TGTTTGTTAATTGACCTCAGCTTTTCATTATCCACTTaGAGGACGTCAATCCAACTCAGCAATAACCATGGA +
Preference number: 3 (lower is better)
Translates to: CLLIDLSFSLST*RTSIQLSNNHG
Trigger: TCCATGGTTATTGCTGAGTTGGATTGACGTCCTGCAAGTGGATAATGAAAAGCTGAGGTCAATTAACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp AAGTTTGATTCCAACCTTGATCTAACAGACCTGGCTTaGTTGAGTATTTGTTGGCTGTTAGCTACTTTTACC +
Preference number: 3 (lower is better)
Translates to: KFDSNLDLTDLA*LSICWLLATFT
Trigger: GGTAAAAGTAGCTAACAGCCAACAAATACTCAACCAAGCCAGGTCTGTTAGATCAAGGTTGGAATCAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR TCA 72 bp ACTGTTCAAGGCAATATTTATTATGGTTTACTGCCCTaGTTGGAGGAGAGGGAGTTTAGAAGCTTATACTCT +
Preference number: 3 (lower is better)
Translates to: TVQGNIYYGLLP*LEEREFRSLYS
Trigger: AGAGTATAAGCTTCTAAACTCCCTCTCCTCCAATCAGGGCAGTAAACCATAATAAATATTGCCTTGAACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CCA 72 bp TTCAAGGCAATATTTATTATGGTTTACTGCCCTGATTaGAGGAGAGGGAGTTTAGAAGCTTATACTCTTTCC +
Preference number: 3 (lower is better)
Translates to: FKAIFIMVYCPD*RRGSLEAYTLS
Trigger: GGAAAGAGTATAAGCTTCTAAACTCCCTCTCCTCCAATCAGGGCAGTAAACCATAATAAATATTGCCTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR-3UTR CAA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCTGTTCTTCATCACACTaGCCAATTTCAAGCATCTTA +
Preference number: 3 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPICSSSH*PISSIL
Trigger: TAAGATGCTTGAAATTGGCAAGTGTGATGAAGAACA...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCGGAGCGGCTCGGCCATaGGCGGCGCTGACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTGAARP*AALTLW
Trigger: CCAGAGCGTCAGCGCCGCCCATGGCCGAGCCGCTCC...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCGGCGTCTCCACAGCTTaGGCCGCCGCGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTGVSTA*AAASSA
Trigger: GGCCGAGGACGCGGCGGCCCAAGCTGTGGAGACGCC...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTCCCGAGCCCACCCGATaGGTCTGCCTCTGGACCGCG +
Preference number: 4 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSPEPTR*VCLWTA
Trigger: CGCGGTCCAGAGGCAGACGCATCGGGTGGGCTCGGG...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGTCCTCCCGGCCGGGCTaGAGACCCGAGCCCACCCGA +
Preference number: 4 (lower is better)
Translates to: RITYRLAVQMTWHVERRESSRPG*RPEPTR
Trigger: TCGGGTGGGCTCGGGTCTCCAGCCCGGCCGGGAGGA...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp TGCCCAAGCCCGCTTATCAGTGCATTCCCAGCAGCCTaGCTGAAGGATGGGTCCCCTGGGCCTTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: CPSPLISAFPAA*LKDGSPGPSRG
Trigger: TCCACGGGAAGGCCCAGGGGACCCATCCTTCAGCAAGGCTGCTGGGAATGCACTGATAAGCGGGCTTGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp CGAGACTCATCCCTGAAACATGGCACCTTCCATGTGGCTACTCTACTCCTTGGGCCCACCCGATGCGTCTaGCTCTGGACCGCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RDSSLKHGTFHVATLLLGPTRCV*LWTARG
Trigger: CCCCCTCGCGGTCCAGAGGCAGACGCATCGGGTGGG...CCCAAGGAGTAGAGTAGCCACATGGAAGGTGCCATGTTTCAGGGATGAGTCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGCTGCCAGCCCCAGCCTaGCGAGGAGAGCCACCGCTG +
Preference number: 4 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRLPAPA*RGEPPL
Trigger: CAGCGGTGGCTCTCCTCGGCAGGCTGGGGCTGGCAG...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp GCAGGACCACTGGTCTCTGGCTTCCCTCTCCCTGCTTaGCTGCCTAGAAACTGCCTCCAGGCCATTCGCCTG +
Preference number: 4 (lower is better)
Translates to: AGPLVSGFPLPA*LPRNCLQAIRL
Trigger: CAGGCGAATGGCCTGGAGGCAGTTTCTAGGCAGCAAAGCAGGGAGAGGGAAGCCAGAGACCAGTGGTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCGGCCATGGGCGGCGCTaGCGCTCTGGGAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSGHGRR*RSGSLV
Trigger: GACCAGGCTCCCAGAGCGTCAGCGCCGCCCATGGCC...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TCAGGTCTGGGGTGGGGCCTGAGAGTGTATTTCCTCCGAGCTCCCACATCCATGGTCTGGGGTGGGGCCTaGGAGTGTATTTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SGLGWGLRVYFLRAPTSMVWGGA*ECISSE
Trigger: CTCGGAGGAAATACACTCTCAGGCCCCACCCCAGAC...CATGGATGTGGGAGCTCGGAGGAAATACACTCTCAGGCCCCACCCCAGACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000453452.1
CDS-3UTR GCA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCCACCTCTGCCCAAGATaGTCCCCTCACCTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSAHLCPR*SPHLCP
Trigger: GGGGCAGAGGTGAGGGGAGCATCTTGGGCAGAGGTG...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GGGGTGGGGCCTGAGAGTGTATTTCCTCCGAGCTCCCACATCCATGCCGGTGCTCTCTCTAAAAGGACCTaGACCAGGCTCCACGTAGCT +
Preference number: 4 (lower is better)
Translates to: GVGPESVFPPSSHIHAGALSKRT*TRLHVA
Trigger: AGCTACGTGGAGCCTGGTTCAGGTCCTTTTAGAGAG...AGCACCGGCATGGATGTGGGAGCTCGGAGGAAATACACTCTCAGGCCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453452.1
CDS-3UTR GCA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCAGTGGCACCGCTCTATaGCTGCCATGGTCCACCCCT +
Preference number: 4 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSASGTAL*LPWSTP
Trigger: AGGGGTGGACCATGGCAGGCATAGAGCGGTGCCACT...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCGACGCTCTGGGAGCCTaGTCAGCCGCGCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSDALGA*SAAQRP
Trigger: GGGCCTCTGCGCGGCTGACCAGGCTCCCAGAGCGTC...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp AGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATGCTGCCAGGTTTGGCACCCTGCTCTGTaGTGGCATCTTAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RIQSQEYAPGPCSTCCQVWHPAL*WHLRRR
Trigger: TCTCCTCCTAAGATGCCACCACAGAGCAGGGTGCCA...AACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp AGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATGCTGCCAGGTTGCGGTTCAGATGACGTaGCATGTGGAGAGACGTGAG +
Preference number: 4 (lower is better)
Translates to: RIQSQEYAPGPCSTCCQVAVQMT*HVERRE
Trigger: CTCACGTCTCTCCACATGCCACGTCATCTGAACCGC...AACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp AGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATGCTGCCAGGTTGCTTGGCCTTCAGCTTaGTCTGCTTGGCTACAGCAT +
Preference number: 4 (lower is better)
Translates to: RIQSQEYAPGPCSTCCQVAWPSA*SAWLQH
Trigger: ATGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGC...AACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGCATCACAGCCCTTCCTaGCAGCCCCAGCCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGHHSPS*QPQPAE
Trigger: CTCGGCAGGCTGGGGCTGGCAGGAAGGGCTGTGATG...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCGAAGGATGGGTCCCCTaGGCCTTCCCGTGGAACATA +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTEGWVP*AFPWNI
Trigger: TATGTTCCACGGGAAGGCCCAGGGGACCCATCCTTC...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCGCCTTGCTTGGTCTTTaGCAAGAGGGCCCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSAALLGL*QEGPLR
Trigger: TCTGAGGGGGCCCTCTTGCCAAAGACCAAGCAAGGC...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp AGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATGCTGCCAGGTTCTGGAGTTGTGGGCATaGGAAGTACTAAGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RIQSQEYAPGPCSTCCQVLELWA*EVLSPS
Trigger: TGAGGGACTTAGTACTTCCCATGCCCACAACTCCAG...AACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp AGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATGCTGCCAGGTTCAGGCCCAGGAGATCTaGTGTAAGCCAAACTTTGAT +
Preference number: 4 (lower is better)
Translates to: RIQSQEYAPGPCSTCCQVQAQEI*CKPNFD
Trigger: ATCAAAGTTTGGCTTACAGCAGATCTCCTGGGCCTG...AACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp AGGAGAAGGGGAGGGACCAGTCCTGAGGGACACCTTTaGCTTCATGGGGAAAGACCTTGGACACTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RRRGGTSPEGHL*LHGERPWTLSS
Trigger: GGAAGACAGTGTCCAAGGTCTTTCCCCATGAAGCAAAAGGTGTCCCTCAGGACTGGTCCCTCCCCTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCATTAGGCAGATAACCTaGAGGCCCAGGAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSAIRQIT*RPRRSA
Trigger: AGCAGATCTCCTGGGCCTGCAGGTTATCTGCCTAAT...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp AGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATGCTGCCAGGTTGGCGGTTGGAGTAATTaGTCTTGCAGTTTGCTTATG +
Preference number: 4 (lower is better)
Translates to: RIQSQEYAPGPCSTCCQVGGWSN*SCSLLM
Trigger: CATAAGCAAACTGCAAGAGCAATTACTCCAACCGCC...AACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCTCACAGCTGGGCGGCTaGTACTTTCTTGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSASQLGG*YFLEGE
Trigger: TTCACCTTCAAGAAAGTACCAGCCGCCCAGCTGTGA...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGCACACCCCTCACAGCTaGGCGGCTGGTACTTTCTTG +
Preference number: 4 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGHTPHS*AAGTFL
Trigger: CAAGAAAGTACCAGCCGCCCAGCTGTGAGGGGTGTG...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTCCTGGCTTCTGTGGCTaGCACTGCCACCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GVIALAVCLCPLVWLGTAPGFCG*HCHLGS
Trigger: AGAGCCCAGGTGGCAGTGCCAGCCACAGAAGCCAGG...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACAGGACCACTGGTCTCTaGCTTCCCTCTCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNRTTGL*LPSPCF
Trigger: AAAGCAGGGAGAGGGAAGCCAGAGACCAGTGGTCCT...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp AGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATGCTGCCAGGTTGTCCAAAGAAGCCTTTaGTCTAGGGACAATTTGACC +
Preference number: 4 (lower is better)
Translates to: RIQSQEYAPGPCSTCCQVVQRSL*SRDNLT
Trigger: GGTCAAATTGTCCCTAGACCAAAGGCTTCTTTGGAC...AACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACAGTGGGAGCCCATGTTaGTGGGTTCCATCCATAGCC +
Preference number: 4 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNSGSPC*WVPSIA
Trigger: GGCTATGGATGGAACCCACCAACATGGGCTCCCACT...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CGAGACTCATCCCTGAAACATGGCACCTTCCATGTGGCTACTCTACTCCTTGGGGTTGGCCTTGGTAAGTaGGAGCCCATGTTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RDSSLKHGTFHVATLLLGVGLGK*EPMLVG
Trigger: ACCCACCAACATGGGCTCCCACTTACCAAGGCCAAC...CCCAAGGAGTAGAGTAGCCACATGGAAGGTGCCATGTTTCAGGGATGAGTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp ACACATTGCTCTCGCCACTATCCTCTGACAGCAGGCTaGCCTCCTCCTGCAGTTCAGGGTCAATTACCCTTG +
Preference number: 4 (lower is better)
Translates to: THCSRHYPLTAG*PPPAVQGQLPL
Trigger: CAAGGGTAATTGACCCTGAACTGCAGGAGGAGGCAAGCCTGCTGTCAGAGGATAGTGGCGAGAGCAATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp ACCCACACTCCTTGCAGCTGGATGGCATATCTTGTCTaGAAGGGGGATCTAAGTGGCACCGCTCTATGCCTG +
Preference number: 4 (lower is better)
Translates to: THTPCSWMAYLV*KGDLSGTALCL
Trigger: CAGGCATAGAGCGGTGCCACTTAGATCCCCCTTCAAGACAAGATATGCCATCCAGCTGCAAGGAGTGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp CAGGACCCCTCGGCTGCCATTTGGAGCTTAGTGGTTAACAGGATACTGATGGCACTCACTAAAAGGACCTaGACCAGGCTCCACGTAGCT +
Preference number: 4 (lower is better)
Translates to: QDPSAAIWSLVVNRILMALTKRT*TRLHVA
Trigger: AGCTACGTGGAGCCTGGTTCAGGTCCTTTTAGTGAG...TGCCATCAGTATCCTGTTAACCACTAAGCTCCAAATGGCAGCCGAGGGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACGCATGCTCCCTTCCCTaGGCCTTCTCATTCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNACSLP*AFSFLS
Trigger: AGAAAGGAATGAGAAGGCTCAGGGAAGGGAGCATGC...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTATTGCTCTCAGCAAGTaGAGTTCCATCACAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSIALSK*SSITAL
Trigger: AAGGGCTGTGATGGAACTTCACTTGCTGAGAGCAAT...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTTATGGTTTACTGCCCTaGTTGGAGGAGAGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSYGLLP*LEEREF
Trigger: AAACTCCCTCTCCTCCAATCAGGGCAGTAAACCATA...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGTCCAGGCCATTCGCCTaGGCAATCACTGGACTCACC +
Preference number: 4 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKSRPFA*AITGLT
Trigger: GGTGAGTCCAGTGATTGCTCAGGCGAATGGCCTGGA...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp CAGGACCCCTCGGCTGCCATTTGGAGCTTAGTGGTTAACAGGATACTGATGGCAGCATTTTACCAGCACTaGGGTGGGCACTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: QDPSAAIWSLVVNRILMAAFYQH*GGHWQK
Trigger: CTTTTGCCAGTGCCCACCTCAGTGCTGGTAAAATGC...TGCCATCAGTATCCTGTTAACCACTAAGCTCCAAATGGCAGCCGAGGGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCTTGCTTTGGCAGATGTaGGGATGTTGTTGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTLLWQM*GCCWGN
Trigger: ATTCCCCCAACAACATCCTCACATCTGCCAAAGCAA...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGGTGAGTCACTCAGCCTaGAAATGCTGTCTTACCACC +
Preference number: 4 (lower is better)
Translates to: RITYRLAVQMTWHVERREVSHSA*KCCLTT
Trigger: GGTGGTAAGACAGCATTTGCAGGCTGAGTGACTCAC...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGCCCTGCAGTACATGCTaGCAGGTTAGGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGPCSTC*QVRWLL
Trigger: GAGGAGCCACCTAACCTGGCAGCATGTACTGCAGGG...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCCACCTGCTGAAATGTTaGAGGAAACTTTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSAHLLKC*RKLSPR
Trigger: CCTAGGGGAAAGTTTCCTGCAACATTTCAGCAGGTG...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGTCTCTGTCTGTGTGCTaGTGCCTCCTCTCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGSLSVC*CLLSSH
Trigger: GTGAGAGGAGAGGAGGCAGCAGCACACAGACAGAGA...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCACGTTCGTGGGCCACTaGTACCAATTGTGCCAATTT +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTTFVGH*YQLCQF
Trigger: AAATTGGCACAATTGGTACCAGTGGCCCACGAACGT...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TGTGGTGTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTCCTATCCACCAGGGATaGGGGCCTCCGAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: CGVHSGRVNEIVKEVERCPIHQG*GPPSQP
Trigger: TGGCTGGCTCGGAGGCCCCCATCCCTGGTGGATAGG...ACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAACACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGGCTGGCACTGCCACCTaGGCTCTTCAAGGTCTCATC +
Preference number: 4 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGAGTAT*ALQGLI
Trigger: GATGAGACCTTGAAGAGCCCAGGTGGCAGTGCCAGC...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTGCACCCTGGCTTCTGTaGCTGGCACTGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPAPWLL*LALPPG
Trigger: CCCAGGTGGCAGTGCCAGCCACAGAAGCCAGGGTGC...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp AGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATGCTGCCAGGTTACTGTAATGACTCTTTaGGTTTCTGGGTATCAGACG +
Preference number: 4 (lower is better)
Translates to: RIQSQEYAPGPCSTCCQVTVMTL*VSGYQT
Trigger: CGTCTGATACCCAGAAACCCAAAGAGTCATTACAGT...AACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGGGCTACTCTACTCCTTaGGGCCCGCTTCTGTTATGG +
Preference number: 4 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGGYSTP*GPLLLW
Trigger: CCATAACAGAAGCGGGCCCCAAGGAGTAGAGTAGCC...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp ACAGTTAGGTCCTTGTACCATGGCCTTGCTTGGTCTTaGGCAAGAGGGCCCCCTCAGAAAAGCATGCTCTCA +
Preference number: 4 (lower is better)
Translates to: TVRSLYHGLAWS*ARGPPQKSMLS
Trigger: TGAGAGCATGCTTTTCTGAGGGGGCCCTCTTGCCAAAGACCAAGCAAGGCCATGGTACAAGGACCTAACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp CTACCAAGCTGCCCTAGAGCAGTGAGTCTGTATTATCTCCTGGCATTTTTCTCAACTCCACGGACGTGCTaGCCCACTTGGCTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LPSCPRAVSLYYLLAFFSTPRTC*PTWLVH
Trigger: ATGGACCAGCCAAGTGGGTCAGCACGTCCGTGGAGT...TGAGAAAAATGCCAGGAGATAATACAGACTCACTGCTCTAGGGCAGCTTGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTTGTTGGTCACCTCTCCGGGCCTaGCAGCCTAGGGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: VHSGRVNEIVKEVERCCWSPLRA*QPRGST
Trigger: TGTGGAACCCCTAGGCTGTCAGGCCCGGAGAGGTGA...CCAACAACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGCTCACTAGGTTGCCATaGCTCGTCTTGAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRLTRLP*LVLNFW
Trigger: CCAGAAGTTCAAGACGAGTCATGGCAACCTAGTGAG...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCTGGAACATAATTGTCTaGTGGGTCACCTTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTWNIIV*WVTLPH
Trigger: ATGAGGCAAGGTGACCCATCAGACAATTATGTTCCA...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCCAGGGACCTGCACTGTaGTTCTCTCATTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSQGPAL*FSHWAL
Trigger: CAAGGCCCAATGAGAGAATCACAGTGCAGGTCCCTG...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCCTCAGTTGCCTGCTCTaGCCTACCTTCCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: FSWCEILYPESPKSIYPLLSCLL*PTFHSG
Trigger: GCCGCTGTGGAAGGTAGGTCAGAGCAGGCAACTGAG...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp CTACCAAGCTGCCCTAGAGCAGTGAGTCTGTATTATCTCCTGGCATTTTTCTCAGCCTGGCGGTTCAGATaGCGTGGCATGTGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LPSCPRAVSLYYLLAFFSAWRFR*RGMWRD
Trigger: GTCTCTCCACATGCCACGTCATCTGAACCGCCAGGC...TGAGAAAAATGCCAGGAGATAATACAGACTCACTGCTCTAGGGCAGCTTGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGGGTCTCTGGGGGAGGTaGCAACCCAACAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWGLWGR*QPNRGG
Trigger: ACCTCCTCTGTTGGGTTGTCACCTCCCCCAGAGACC...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGCAGTCCTTAGCAGAGTaGTTGGAACATAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRQSLAE*LEHSRD
Trigger: GTCCCTGCTATGTTCCAAGCACTCTGCTAAGGACTG...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACTGCCTCATATATCCATaGTGGCATGCTCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNCLIYP*WHAPFP
Trigger: AGGGAAGGGAGCATGCCAGCATGGATATATGAGGCA...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CTACGATGCAGATTCAGGTCTGGGGTGGGGCCTGAGAGTGTATTTCCTCCGAGCATCCATCGAAAGACCTaGGGATTTTGCTACGATGCA +
Preference number: 4 (lower is better)
Translates to: LRCRFRSGVGPESVFPPSIHRKT*GFCYDA
Trigger: TGCATCGTAGCAAAATCCCCAGGTCTTTCGATGGAT...GCTCGGAGGAAATACACTCTCAGGCCCCACCCCAGACCTGAATCTGCATCGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453452.1
CDS-3UTR CCA 90 bp CAGGACCCCTCGGCTGCCATTTGGAGCTTAGTGGTTAACAGGATACTGATGGCATACCACCTACGTTCGTaGGCCACTGGTACCAATTGT +
Preference number: 4 (lower is better)
Translates to: QDPSAAIWSLVVNRILMAYHLRS*ATGTNC
Trigger: ACAATTGGTACCAGTGGCCCACGAACGTAGGTGGTA...TGCCATCAGTATCCTGTTAACCACTAAGCTCCAAATGGCAGCCGAGGGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCCTAACAGACCTGGCTTaGTTGAGTATTTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTLTDLA*LSICWL
Trigger: CAGCCAACAAATACTCAACCAAGCCAGGTCTGTTAG...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGAGTTCCAGCTCTTCATaGGGAAGGGTGGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGSSSSS*GRVGLF
Trigger: GAAGAGGCCCACCCTTCCCCATGAAGAGCTGGAACT...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACCATGGGGAAAGACCTTaGACACTGTCTTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNHGERP*TLSSLV
Trigger: CACAAGGGAAGACAGTGTCCAAGGTCTTTCCCCATG...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCACACCTTTTGCTTCATaGGGAAAGACCTTGGACACT +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTTPFAS*GKTLDT
Trigger: AGTGTCCAAGGTCTTTCCCCATGAAGCAAAAGGTGT...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCTTTGTTAGGGGAAGTCCAAAGAAGCCTTTGGTCTAGGGACAATTTGACCTCACCAAGAGTACGCCCCTaGCCCCTGCAGTACATGCTG +
Preference number: 4 (lower is better)
Translates to: ALLGEVQRSLWSRDNLTSPRVRP*PLQYML
Trigger: CAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGG...TGAGGTCAAATTGTCCCTAGACCAAAGGCTTCTTTGGACTTCCCCTAACAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGGACGGTGGCACATCTTaGCAGGGTATTGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGDGGTS*QGIVSH
Trigger: GTGGGAGACAATACCCTGCCAAGATGTGCCACCGTC...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTAAAAAGGTCACTCATTaGAGGAGTCCTGTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSKKVTH*RSPVLD
Trigger: GTCCAACACAGGACTCCTCCAATGAGTGACCTTTTT...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCGGCCATGGGCGGCGCTaGCGCTCTGGGAGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCGHGRR*RSGSLV
Trigger: GACCAGGCTCCCAGAGCGTCAGCGCCGCCCATGGCC...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS-3UTR TCA 90 bp GGAGGAGAGGGGAAAGAGTGGCTTTCTTGGTTCTGCCGTAGTAGGGGTTCAGCCAGTGAAGGAGGGAAGTaGCATGAAATTTCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: GGEGKEWLSWFCRSRGSASEGGK*HEISLD
Trigger: ATCTAGGGAAATTTCATGTCACTTCCCTCCTTCACT...GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTTCCCCTCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGGCTGCCCTAGAGCAGTaGGTCTGTATTATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKAALEQ*VCIISW
Trigger: CCAGGAGATAATACAGACTCACTGCTCTAGGGCAGC...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCGAATGGAGGGTCATTTaGATGAAACATGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTEWRVI*MKHGPD
Trigger: ATCAGGTCCATGTTTCATTCAAATGACCCTCCATTC...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCCGCGTTACTGTCCCCTaGGGCGGGGACCCGGCACGG +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCRVTVP*GGDPAR
Trigger: CCGTGCCGGGTCCCCGCCGCAGGGGACAGTAACGCG...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448741.5
CDS-3UTR GCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCTTATCCGAGAGACCGTaGCCTACAAGAGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSLSERP*PTRAVL
Trigger: GAGCACTGCTCTTGTAGGGCACGGTCTCTCGGATAA...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACTACCATCAAATCCTGTaGTTGGCCTTCAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNYHQIL*LAFSLL
Trigger: GAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTA...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCGTCCTCATTACTCCCTaGTTCATTCTAAATTCCCCT +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTVLITP*FILNSP
Trigger: AGGGGAATTTAGAATGAAGCAGGGAGTAATGAGGAC...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTCATGGACCTGATTGTTaGGCCACTTTCCTTAATAAG +
Preference number: 4 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSHGPDC*ATFLNK
Trigger: CTTATTAAGGAAAGTGGCGCAACAATCAGGTCCATG...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCTCCTCCCGGCCGGGCTaGAGACCCGAGCCCACCCGA +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCSSRPG*RPEPTR
Trigger: TCGGGTGGGCTCGGGTCTCCAGCCCGGCCGGGAGGA...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCGCGGCGCTGACGCTCTaGGAGCCTGGTCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCAALTL*EPGQPR
Trigger: GCGCGGCTGACCAGGCTCCCAGAGCGTCAGCGCCGC...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCGGAGCGGCTCGGCCATaGGCGGCGCTGACGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCGAARP*AALTLW
Trigger: CCAGAGCGTCAGCGCCGCCCATGGCCGAGCCGCTCC...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCGGCGTCTCCACAGCTTaGGCCGCCGCGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCGVSTA*AAASSA
Trigger: GGCCGAGGACGCGGCGGCCCAAGCTGTGGAGACGCC...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS-3UTR CCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCTTCGTAAAGCCCGTCTaGATGGCTGAATCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSFVKPV*MAESQS
Trigger: GGACTGGGATTCAGCCATCCAGACGGGCTTTACGAA...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CGAGACTCATCCCTGAAACATGGCACCTTCCATGTGGCTACTCTACTCCTTGGGTGGATACAGCATCACTaGGTCTCAAAGTTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: RDSSLKHGTFHVATLLLGWIQHH*VSKFRV
Trigger: GACACGGAACTTTGAGACCCAGTGATGCTGTATCCA...CCCAAGGAGTAGAGTAGCCACATGGAAGGTGCCATGTTTCAGGGATGAGTCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGTTACCAGCACTGAGGTaGGCACTGGCAAAAGCTAAT +
Preference number: 4 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRLPALR*ALAKAN
Trigger: ATTAGCTTTTGCCAGTGCCCACCTCAGTGCTGGTAA...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp TTGGAGTTAGTGAAGAGGAAGTCAGTGATGAGGGGCTaGGGACACAGGTTTTCTTACCACCACCTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LELVKRKSVMRG*GHRFSYHHLPV
Trigger: GACTGGGAGGTGGTGGTAAGAAAACCTGTGTCCCAAGCCCCTCATCACTGACTTCCTCTTCACTAACTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp GTGCTCTCTTGCTCAGCAAGCAGTGTGTGCAGCTTTTaGTTCTGGGTACTGAACGTGGCCTCTCCCTTTAAC +
Preference number: 4 (lower is better)
Translates to: VLSCSASSVCSF*FWVLNVASPFN
Trigger: GTTAAAGGGAGAGGCCACGTTCAGTACCCAGAACAAAAAGCTGCACACACTGCTTGCTGAGCAAGAGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp CCACCTGGGCTCTTCAAGGTCTCATCATCATCCACATaGCTCTCAGCAAGTGAAGTTCCATCACAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PPGLFKVSSSST*LSASEVPSQPF
Trigger: GAAGGGCTGTGATGGAACTTCACTTGCTGAGAGCAATGTGGATGATGATGAGACCTTGAAGAGCCCAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp TTCAGGGCCCCAGGGACCTGCACTGTGATTCTCTCATaGGGCCTTGTCATCTATTCCACACTGCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: FRAPGTCTVILS*GLVIYSTLHLL
Trigger: AAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGAGAATCACAGTGCAGGTCCCTGGGGCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp GCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATaGGAGGAGTCCTGTGTTGGACTGAAACAGTTAGGT +
Preference number: 4 (lower is better)
Translates to: AIPGELWEKGHS*EESCVGLKQLG
Trigger: ACCTAACTGTTTCAGTCCAACACAGGACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCTGGAGTGCAGTGGCATaGTCAGGACTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: FSWCEILYPESPKSIYPLWSAVA*SGLTAT
Trigger: GGTTGCAGTGAGTCCTGATCATGCCACTGCACTCCA...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp CAGGACCCCTCGGCTGCCATTTGGAGCTTAGTGGTTAACAGGATACTGATGGCAGGAGTACAAAACTGGTaGAGTGACATCTCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: QDPSAAIWSLVVNRILMAGVQNW*SDISER
Trigger: CCTTTCAGAGATGTCACTTCACCAGTTTTGTACTCC...TGCCATCAGTATCCTGTTAACCACTAAGCTCCAAATGGCAGCCGAGGGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGGAGCCAGCCAGACAGTaGGTCACTCAGCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWEPARQ*VTQPAN
Trigger: ATTTGCAGGCTGAGTGACTCACTGTCTGGCTGGCTC...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCGGGAGGGACCAGTCCTaGGGGACACCTTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSGRDQS*GTPFAS
Trigger: TGAAGCAAAAGGTGTCCCTCAGGACTGGTCCCTCCC...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCCCCACCCGATGCGTCTaGCTCTGGACCGCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCPTRCV*LWTARG
Trigger: CCCCCTCGCGGTCCAGAGGCAGACGCATCGGGTGGG...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS-3UTR GCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCCCCGAGCCCACCCGATaGGTCTGCCTCTGGACCGCG +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCPEPTR*VCLWTA
Trigger: CGCGGTCCAGAGGCAGACGCATCGGGTGGGCTCGGG...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS-3UTR GCA 90 bp AGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATGCTGCCAGGTTGTTCTTCATCACACTTaGCAATTTCAAGCATCTTAT +
Preference number: 4 (lower is better)
Translates to: RIQSQEYAPGPCSTCCQVVLHHT*QFQASY
Trigger: ATAAGATGCTTGAAATTGGCAAGTGTGATGAAGAAC...AACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TGTGGTGTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTATGATCAGGACTCACTaGAACCTCCGCCTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: CGVHSGRVNEIVKEVERCMIRTH*NLRLPS
Trigger: GCTCGGGAGGCGGAGGTTGCAGTGAGTCCTGATCAT...ACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAACACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp CTACCAAGCTGCCCTAGAGCAGTGAGTCTGTATTATCTCCTGGCATTTTTCTCATCCCTCTCCCTGCTTTaGTGCCTAGAAACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPSCPRAVSLYYLLAFFSSLSLL*CLETAS
Trigger: GGAGGCAGTTTCTAGGCAGCAAAGCAGGGAGAGGGA...TGAGAAAAATGCCAGGAGATAATACAGACTCACTGCTCTAGGGCAGCTTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCGACGCTCTGGGAGCCTaGTCAGCCGCGCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCDALGA*SAAQRP
Trigger: GGGCCTCTGCGCGGCTGACCAGGCTCCCAGAGCGTC...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS-3UTR CCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACCTGACTCTAAAGGCCTaGGTGGATCAAATTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNLTLKA*VDQIAV
Trigger: AACAGCAATTTGATCCACCCAGGCCTTTAGAGTCAG...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCCAGGGGCCTTGTCTGTaGTGTTCACAGTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSQGPCL*CSQWEG
Trigger: ACCCTCCCACTGTGAACACCACAGACAAGGCCCCTG...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CTACCAAGCTGCCCTAGAGCAGTGAGTCTGTATTATCTCCTGGCATTTTTCTCACAGGCTGGAGTGCAGTaGCATGATCAGGACTCACTG +
Preference number: 4 (lower is better)
Translates to: LPSCPRAVSLYYLLAFFSQAGVQ*HDQDSL
Trigger: CAGTGAGTCCTGATCATGCCACTGCACTCCAGCCTG...TGAGAAAAATGCCAGGAGATAATACAGACTCACTGCTCTAGGGCAGCTTGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGATCAAATCCTGTGCTTaGCCTTCAGCTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGIKSCA*PSACSA
Trigger: AGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGAT...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCGTCTGTATTATCTCCTaGCATTTTTCTCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTVCIIS*HFSHGV
Trigger: CACACCATGAGAAAAATGCCAGGAGATAATACAGAC...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CGAGACTCATCCCTGAAACATGGCACCTTCCATGTGGCTACTCTACTCCTTGGGGCTTGGTCTGTCAGTTaGAAACAACCTCAATGCGAT +
Preference number: 4 (lower is better)
Translates to: RDSSLKHGTFHVATLLLGAWSVS*KQPQCD
Trigger: ATCGCATTGAGGTTGTTTCCAACTGACAGACCAAGC...CCCAAGGAGTAGAGTAGCCACATGGAAGGTGCCATGTTTCAGGGATGAGTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp TTCACAGCCTCATCAGGGTCTCAGCATTGGTATTTGTaGCAGGCAGGTTGGATAGTCACAGTGAGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: FTASSGSQHWYL*QAGWIVTVSSV
Trigger: GACACTGCTCACTGTGACTATCCAACCTGCCTGCAACAAATACCAATGCTGAGACCCTGATGAGGCTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp GTCTTCACAGCCTCATCAGGGTCTCAGCATTGGTATTaGTTGCAGGCAGGTTGGATAGTCACAGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: VFTASSGSQHWY*LQAGWIVTVSS
Trigger: ACTGCTCACTGTGACTATCCAACCTGCCTGCAACAAATACCAATGCTGAGACCCTGATGAGGCTGTGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp GAGCCTACCATAGTGAATTTGCTATCAAGCGACCAGTaGGTCTTCACAGCCTCATCAGGGTCTCAGCATTGG +
Preference number: 4 (lower is better)
Translates to: EPTIVNLLSSDQ*VFTASSGSQHW
Trigger: CCAATGCTGAGACCCTGATGAGGCTGTGAAGACCAACTGGTCGCTTGATAGCAAATTCACTATGGTAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp CTACGATGCAGATTCAGGTCTGGGGTGGGGCCTGAGAGTGTATTTCCTCCGAGCGTCAAAAGTTGTTCTTaGTTCTTTTGGGCACTAGAA +
Preference number: 4 (lower is better)
Translates to: LRCRFRSGVGPESVFPPSVKSCS*FFWALE
Trigger: TTCTAGTGCCCAAAAGAATCAAGAACAACTTTTGAC...GCTCGGAGGAAATACACTCTCAGGCCCCACCCCAGACCTGAATCTGCATCGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000453452.1
CDS-3UTR TCA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTGCTGACCACCTTATGTaGTGTCCACCACACCCTACC +
Preference number: 4 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPADHLM*CPPHPT
Trigger: GGTAGGGTGTGGTGGACATCACATAAGGTGGTCAGC...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCGTGGGCATTAACATGTaGTACAGTTTTTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTVGINM*YSFSTS
Trigger: AGAAGTTGAAAAACTGTATCACATGTTAATGCCCAC...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TGTGGTGTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTTTGCTGCCTAGAAACTaGCTCCAGGCCATTCGCCTG +
Preference number: 4 (lower is better)
Translates to: CGVHSGRVNEIVKEVERCLLPRN*LQAIRL
Trigger: CAGGCGAATGGCCTGGAGGCAGTTTCTAGGCAGCAA...ACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAACACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TGTGGTGTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTCACTCTCTGTCTGTGTaGTGCTGCCTCCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CGVHSGRVNEIVKEVERCHSLSV*CCLLSS
Trigger: AGAGGAGAGGAGGCAGCAGCACACAGACAGAGAGTG...ACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAACACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCTGGCAGGCCATTTTCTaGCACTTCCATAAATATTTT +
Preference number: 4 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTWQAIF*HFHKYF
Trigger: AAAATATTTATGGAAGTGGCAGAAAATGGCCTGCCA...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GCTTTGTTAGGGGAAGTCCAAAGAAGCCTTTGGTCTAGGGACAATTTGACCTCAAGGCTTGCCTCCTCCTaGAGTTCAGGGTCAATTACC +
Preference number: 4 (lower is better)
Translates to: ALLGEVQRSLWSRDNLTSRLASS*SSGSIT
Trigger: GGTAATTGACCCTGAACTGCAGGAGGAGGCAAGCCT...TGAGGTCAAATTGTCCCTAGACCAAAGGCTTCTTTGGACTTCCCCTAACAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGATGCGATCTGCTTTCTaGCATCCTACTATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RITYRLAVQMTWHVERREMRSAF*HPTISE
Trigger: TTCAGAAATAGTAGGATGGCAGAAAGCAGATCGCAT...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GAGAGTGTATTTCCTCCGAGCTCCCACATCCATGCCGGTGCTGCTGATCAGAGACACGTAGCTTGTCACTaGAGCTGTCATCTTTATTTT +
Preference number: 4 (lower is better)
Translates to: ESVFPPSSHIHAGAADQRHVACH*SCHLYF
Trigger: AAAATAAAGATGACAGCTCCAGTGACAAGCTACGTG...TCTCTGATCAGCAGCACCGGCATGGATGTGGGAGCTCGGAGGAAATACACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453452.1
CDS-3UTR CCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCTGCAGCTTTTTGTTCTaGGTACTGAACGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSCSFLF*VLNVAS
Trigger: AGAGGCCACGTTCAGTACCCAGAACAAAAAGCTGCA...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CGAGACTCATCCCTGAAACATGGCACCTTCCATGTGGCTACTCTACTCCTTGGGACCTTGCTCAGTTATTaGCTGGGAATTGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RDSSLKHGTFHVATLLLGTLLSY*LGIARK
Trigger: TTTTCTGGCAATTCCCAGCCAATAACTGAGCAAGGT...CCCAAGGAGTAGAGTAGCCACATGGAAGGTGCCATGTTTCAGGGATGAGTCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCTTTGTTAGGGGAAGTCCAAAGAAGCCTTTGGTCTAGGGACAATTTGACCTCACTTCATGGGGAAGGGTaGGCCTCTTCTGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: ALLGEVQRSLWSRDNLTSLHGEG*ASSEGC
Trigger: ACATCCTTCAGAAGAGGCCCACCCTTCCCCATGAAG...TGAGGTCAAATTGTCCCTAGACCAAAGGCTTCTTTGGACTTCCCCTAACAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGATTTCCATCTTCCAATaGGCTGCTGCCGATCCTACT +
Preference number: 4 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKISIFQ*AAADPT
Trigger: AGTAGGATCGGCAGCAGCCCATTGGAAGATGGAAAT...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGAAAGAGTGGCTTTCTTaGTTCTGCCGTAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGKEWLS*FCRSRG
Trigger: ACCCCTACTACGGCAGAACCAAGAAAGCCACTCTTT...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGGAACATCACAGACACTaGATGGCACCATCTACAAGG +
Preference number: 4 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKEHHRH*MAPSTR
Trigger: CCTTGTAGATGGTGCCATCCAGTGTCTGTGATGTTC...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp TCGTCATTCAAGTCTCAACTGTCTCTTGAGAGGCCTTaGCTGACCACCTTATGTGATGTCCACCACACCCTA +
Preference number: 4 (lower is better)
Translates to: SSFKSQLSLERP*LTTLCDVHHTL
Trigger: TAGGGTGTGGTGGACATCACATAAGGTGGTCAGCAAAGGCCTCTCAAGAGACAGTTGAGACTTGAATGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp ATCAGGGTCTCAGCATTGGTATTTGTTGCAGGCAGGTaGGATAGTCACAGTGAGCAGTGTCTAAGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: IRVSALVFVAGR*DSHSEQCLSWP
Trigger: AGGCCAACTTAGACACTGCTCACTGTGACTATCCAACCTGCCTGCAACAAATACCAATGCTGAGACCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCAGGAGGGAAGTGACATaGAATTTCCCTAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSRREVT*NFPRSS
Trigger: TGAGGATCTAGGGAAATTTCATGTCACTTCCCTCCT...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCATTTTTGTGTCCAGCTaGATTTCACCTCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: FSWCEILYPESPKSIYPLIFVSS*ISPLRA
Trigger: GGCCCGGAGAGGTGAAATTCAGCTGGACACAAAAAT...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCGCATCTTATTTGTGTTaGACTCCCTCACCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSASYLC*TPSPSR
Trigger: TCTAGAGGGTGAGGGAGTTCAACACAAATAAGATGC...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCCCCCTGGCTTTCATCTaGCTCATCCTCGTCATTCAA +
Preference number: 4 (lower is better)
Translates to: FSWCEILYPESPKSIYPLPLAFI*LILVIQ
Trigger: TTGAATGACGAGGATGAGTCAGATGAAAGCCAGGGG...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCTCCCAGCAGCCTTGCTaGAGGATGGGTCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCSQQPC*RMGPLG
Trigger: GCCCAGGGGACCCATCCTTCAGCAAGGCTGCTGGGA...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTGATCCTACTAGCTTATaGCTTAGTGCTTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: GVIALAVCLCPLVWLGTADPTSL*LSASHR
Trigger: CCTGTGGGAAGCACTAAGTCATAAGCTAGTAGGATC...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCGCATGTGGAGAGACGTaGGAACTTCTTACAGGCATG +
Preference number: 4 (lower is better)
Translates to: FSWCEILYPESPKSIYPLACGET*ELLTGM
Trigger: CATGCCTGTAAGAAGTTCTCACGTCTCTCCACATGC...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGTCCTTCCTAAAACCCTaGATAAGGTCCGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGSFLKP*IRSAVF
Trigger: GAAAACTGCGGACCTTATGCAGGGTTTTAGGAAGGA...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTCCTCACTCTGGTAACTaGATCCCCACAACTAAAGCT +
Preference number: 4 (lower is better)
Translates to: GVIALAVCLCPLVWLGTAPHSGN*IPTTKA
Trigger: AGCTTTAGTTGTGGGGATGCAGTTACCAGAGTGAGG...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCTCATCTATTCCACACTaGATCTTCTTTCCCCCTACC +
Preference number: 4 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSSSIPH*IFFPPT
Trigger: GGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGA...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp CAGGACCCCTCGGCTGCCATTTGGAGCTTAGTGGTTAACAGGATACTGATGGCATGGAGTAATTGCTCTTaGAGTTTGCTTATGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QDPSAAIWSLVVNRILMAWSNCS*SLLMSS
Trigger: AGAGGACATAAGCAAACTGCAAGAGCAATTACTCCA...TGCCATCAGTATCCTGTTAACCACTAAGCTCCAAATGGCAGCCGAGGGGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGAATAAGTATACTGTGTaGAGGAGACGGTGGCACATC +
Preference number: 4 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGNKYTV*RRRWHI
Trigger: GATGTGCCACCGTCTCCTGCACACAGTATACTTATT...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCAAAGTTCCACACACATTaGTCTCGCCACTATCCTCTG +
Preference number: 4 (lower is better)
Translates to: FYHQILCLAFSLLCLATAKFHTH*SRHYPL
Trigger: CAGAGGATAGTGGCGAGAGCAATGTGTGTGGAACTT...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTTCAGACCAGGGTTGCTaGACTAGTCCATTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: GVIALAVCLCPLVWLGTASDQGC*TSPFSY
Trigger: GTAACTGAATGGACTAGTGCAGCAACCCTGGTCTGA...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGACTATAGCACCTTCCTaGAAATGGTTTTGGAACCAC +
Preference number: 4 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGTIAPS*KWFWNH
Trigger: GTGGTTCCAAAACCATTTGCAGGAAGGTGCTATAGT...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GATTGTTGCGCCACTTTCCTTAATAAGCCACTCGGTAACTGTAATACAGTTTCTGTAGCAGCTGGTGGCTaGCAGCTACCCACACTCCTT +
Preference number: 4 (lower is better)
Translates to: DCCATFLNKPLGNCNTVSVAAGG*QLPTLL
Trigger: AAGGAGTGTGGGTAGCTGGCAGCCACCAGCTGCTAC...AGAAACTGTATTACAGTTACCGAGTGGCTTATTAAGGAAAGTGGCGCAACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCGGGGTTCAGCCTGCATaGGATGCTGATTCCATCATC +
Preference number: 4 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSGVQPA*DADSII
Trigger: GATGATGGAATCAGCATCGCATGCAGGCTGAACCCC...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTGGCTTTCTTGGTTCTaGCGTAGTAGGGGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSWLSWF*RSRGSA
Trigger: GGCTGAACCCCTACTACGGCAGAACCAAGAAAGCCA...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCCTTTCCCGAGCCGAGTaGGGTGCGGCTCTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCLSRAE*GAALFP
Trigger: GGGGAACAGAGCCGCACCCCACTCGGCTCGGGAAAG...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448741.5
CDS-3UTR CCA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCATTTGCTTATGTCCTCTaGTCTGGCTTGGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: FYHQILCLAFSLLCLATAFAYVL*SGLELL
Trigger: GAGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAA...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTTGTTGGGTGCCTCTTCTCTGGTaGGTGCTATCTAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VHSGRVNEIVKEVERCCWVPLLW*VLSSGH
Trigger: ATGCCCACTAGATAGCACCCACCAGAGAAGAGGCAC...CCAACAACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTTCAGGGTCTCAGCATTaGTATTTGTTGCAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GVIALAVCLCPLVWLGTASGSQH*YLLQAG
Trigger: ACCTGCCTGCAACAAATACCAATGCTGAGACCCTGA...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGGGAGGAGTCCTGTGTTaGACTGAAACAGTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWGGVLC*TETVRS
Trigger: GGACCTAACTGTTTCAGTCCAACACAGGACTCCTCC...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTGTGTCCTATGGACTTTaGAATAAAATACGAATAACC +
Preference number: 4 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSVSYGL*NKIRIT
Trigger: GGTTATTCGTATTTTATTCCAAAGTCCATAGGACAC...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGATCACAGACACTGGATaGCACCATCTACAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWITDTG*HHLQGH
Trigger: GTGCCCTTGTAGATGGTGCCATCCAGTGTCTGTGAT...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTGAGAGGCCTTTGCTaGCCACCTTATGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSLRGLC*PPYVMS
Trigger: GGACATCACATAAGGTGGTCAGCAAAGGCCTCTCAA...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCTCCCAGCCCCATAGATaGTCTGTAAATTATTTGCTC +
Preference number: 4 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSSQPHR*SVNYLL
Trigger: GAGCAAATAATTTACAGATCATCTATGGGGCTGGGA...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACTTCTTGAAATTAGTTTaGTCCTTCCAAGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNFLKLV*SFQGLS
Trigger: AGACAAGCCTTGGAAGGATCAAACTAATTTCAAGAA...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TGTGGTGTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTGCCTGCATGCGATGCTaGTTCCATCATCAAATGAGC +
Preference number: 4 (lower is better)
Translates to: CGVHSGRVNEIVKEVERCACMRC*FHHQMS
Trigger: GCTCATTTGATGATGGAATCAGCATCGCATGCAGGC...ACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAACACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCCACTCAGCCTGCAAATaGTGTCTTACCACCTACGTT +
Preference number: 4 (lower is better)
Translates to: FSWCEILYPESPKSIYPLHSACK*CLTTYV
Trigger: AACGTAGGTGGTAAGACAGCATTTGCAGGCTGAGTG...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCGCCAGGGACTGTCTGTaGCACCTATCCACCAGGGAT +
Preference number: 4 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPIARDCL*HLSTRD
Trigger: ATCCCTGGTGGATAGGTGGCACAGACAGTCCCTGGC...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCAGGTCTGGCTTGGAACTaGTCCTGTACATATCATTTC +
Preference number: 4 (lower is better)
Translates to: FYHQILCLAFSLLCLATAGLAWN*SCTYHF
Trigger: GAAATGATATGTACAGGAGCAGTTCCAAGCCAGACC...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGCATCTTTGCCACCACTaGCACTTTATGTGTGCATTT +
Preference number: 4 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGHLCHH*HFMCAF
Trigger: AAATGCACACATAAAGTGGCAGTGGTGGCAAAGATG...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TGTGGTGTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTGTTAGGTGGCTCCTCTaGCATAGATCCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: CGVHSGRVNEIVKEVERCVRWLL*HRSHFS
Trigger: GGAGAAATGGGATCTATGCCAGAGGAGCCACCTAAC...ACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAACACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCTTTGTTAGGGGAAGTCCAAAGAAGCCTTTGGTCTAGGGACAATTTGACCTCATATCAAGCGACCAGTTaGTCTTCACAGCCTCATCAG +
Preference number: 4 (lower is better)
Translates to: ALLGEVQRSLWSRDNLTSYQATS*SSQPHQ
Trigger: CTGATGAGGCTGTGAAGACCAACTGGTCGCTTGATA...TGAGGTCAAATTGTCCCTAGACCAAAGGCTTCTTTGGACTTCCCCTAACAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCAGGGTCCTGAGCTCCTaGGAGCCAAACCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPIRVLSS*EPNPSQ
Trigger: CTGAGAAGGGTTTGGCTCCCAGGAGCTCAGGACCCT...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp CACTGTCCTTGTCTCTTTTATCCACCCTTCCCATATTaGAGACACCCAAATCACCCACCAGTCATTGCGTTC +
Preference number: 4 (lower is better)
Translates to: HCPCLFYPPFPY*RHPNHPPVIAF
Trigger: GAACGCAATGACTGGTGGGTGATTTGGGTGTCTCAAATATGGGAAGGGTGGATAAAAGAGACAAGGACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp TGCGATGGTAAGTGGGGTCACTCCTGCCTCCACTCCTaGGTTCTGAAATCTATATATTCCTGTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: CDGKWGHSCLHS*VLKSIYSCCRH
Trigger: GTGTCTACAACAGGAATATATAGATTTCAGAACCAAGGAGTGGAGGCAGGAGTGACCCCACTTACCATCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCACTCCACGGACGTGCTaGCCCACTTGGCTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCTPRTC*PTWLVH
Trigger: ATGGACCAGCCAAGTGGGTCAGCACGTCCGTGGAGT...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367697.7
ENST00000448741.5
ENST00000607197.6
CDS-3UTR TCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGCCACAAAAGACAATTTaGTTTTTGTGTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGPQKTI*FLCPAE
Trigger: TTCAGCTGGACACAAAAATCAAATTGTCTTTTGTGG...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGCACCACTTCAAATCCTaGATAAAACTGACCATCCTT +
Preference number: 4 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKHHFKS*IKLTIL
Trigger: AAGGATGGTCAGTTTTATTCAGGATTTGAAGTGGTG...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCGGCATTTCAACATTTTaGTCACTCTTTCTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSGISTF*SLFLGF
Trigger: GAAGCCTAGAAAGAGTGATCAAAATGTTGAAATGCC...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTTACCAACTATTTCCATaGGACTTTACAGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GVIALAVCLCPLVWLGTAYQLFP*DFTGQD
Trigger: GTCCTGACCTGTAAAGTCTCATGGAAATAGTTGGTA...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGTTTTCAAAAAGCATATaGTCCTCTCCTGTGGTTAGA +
Preference number: 4 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGFSKSI*SSPVVR
Trigger: TCTAACCACAGGAGAGGATCATATGCTTTTTGAAAA...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTAATGTCACCTTTGAGTaGAGGTCCATTTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GVIALAVCLCPLVWLGTANVTFE*RSIFSL
Trigger: CAAGCTGAAAATGGACCTTCACTCAAAGGTGACATT...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GATTGTTGCGCCACTTTCCTTAATAAGCCACTCGGTAACTGTAATACAGTTTCTTTGCCTACTGGTCCCTaGACACAGAGTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: DCCATFLNKPLGNCNTVSLPTGP*TQSPKC
Trigger: GCACTTTGGACTCTGTGTTCAGGGACCAGTAGGCAA...AGAAACTGTATTACAGTTACCGAGTGGCTTATTAAGGAAAGTGGCGCAACAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCCACACTCTACCCCACTaGCCTATTCTGTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSHTLPH*PILFFI
Trigger: GATGAAGAACAGAATAGGGCAGTGGGGTAGAGTGTG...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCCTGAGGGACACCTTTTaGTTCATGGGGAAAGACCTT +
Preference number: 4 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSLRDTF*FMGKDL
Trigger: AAGGTCTTTCCCCATGAAGCAAAAGGTGTCCCTCAG...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCCATAGCCTCCATCTTTaGCACCACTGCCACTTTATG +
Preference number: 4 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSHSLHL*HHCHFM
Trigger: CATAAAGTGGCAGTGGTGGCAAAGATGGAGGCTATG...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTCACAGCAGCATAATTTaGTTTGGCAGATGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: GVIALAVCLCPLVWLGTAHSSII*FGRCED
Trigger: ATCCTCACATCTGCCAAAGCAAATTATGCTGCTGTG...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCGCTGACCCACTTGGCTaGTCCATAGTGTCGGATCTC +
Preference number: 4 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPIADPLG*SIVSDL
Trigger: GAGATCCGACACTATGGACCAGCCAAGTGGGTCAGC...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCCCTCACCTCTGCCCCTaGCTTTCATCTGACTCATCC +
Preference number: 4 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPIPHLCP*LSSDSS
Trigger: GGATGAGTCAGATGAAAGCCAGGGGCAGAGGTGAGG...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCATACTGATGGCACCCTaGCTTCTGTGGCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPIILMAP*LLWLAL
Trigger: CAGTGCCAGCCACAGAAGCCAGGGTGCCATCAGTAT...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCTTTGTTAGGGGAAGTCCAAAGAAGCCTTTGGTCTAGGGACAATTTGACCTCACCCAATTCATCATCATaGCCAGAAGCAGATGTTCAC +
Preference number: 4 (lower is better)
Translates to: ALLGEVQRSLWSRDNLTSPNSSS*PEADVH
Trigger: GTGAACATCTGCTTCTGGCCATGATGATGAATTGGG...TGAGGTCAAATTGTCCCTAGACCAAAGGCTTCTTTGGACTTCCCCTAACAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGGTCATTTCATCTACTTaGTTGTTTAGTGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGVISST*LFSASS
Trigger: AGAAGAGGCACTAAACAACCAAGTAGATGAAATGAC...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGTCCTGCAAATGGTTTTaGAACCACAACTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWSCKWF*NHNWSS
Trigger: TGAGGACCAGTTGTGGTTCCAAAACCATTTGCAGGA...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp TTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTaGGAACTGCTCCTGTACATATCATTTCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: LLLQFAYVLWSG*ELLLYISFPSS
Trigger: GGAAGATGGAAATGATATGTACAGGAGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp GTGCTTCTAGGAAAGAATGAGCCTACCATAGTGAATTaGCTATCAAGCGACCAGTTGGTCTTCACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: VLLGKNEPTIVN*LSSDQLVFTAS
Trigger: TGAGGCTGTGAAGACCAACTGGTCGCTTGATAGCAAATTCACTATGGTAGGCTCATTCTTTCCTAGAAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp AAGTTCCGTGTCTACCAGGGCCCAGTAGCACAGCAGAGGCTGTTTTTCAAAAAGACTCCTAAATGCTTTTaGAAGTCTGTTAATCCTTCC +
Preference number: 4 (lower is better)
Translates to: KFRVYQGPVAQQRLFFKKTPKCF*KSVNPS
Trigger: GGAAGGATTAACAGACTTTCAAAAGCATTTAGGAGT...CTTTTTGAAAAACAGCCTCTGCTGTGCTACTGGGCCCTGGTAGACACGGAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCTTCCTCCCAAACTCCTaGTCAGCTGGCAGGCCATTT +
Preference number: 4 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPIFLPNS*SAGRPF
Trigger: AAATGGCCTGCCAGCTGATCAGGAGTTTGGGAGGAA...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTGGAGTAAGCACCTTTaGAAGGAAAAGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSWSKHL*KEKRKQ
Trigger: CTGCTTCCTCTTTTCCTTTCAAAGGTGCTTACTCCA...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCAATGAAACATGGACCTaGTTGTTGCGCCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSNETWT*LLRHFP
Trigger: AGGAAAGTGGCGCAACAATCAGGTCCATGTTTCATT...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GCTTTGTTAGGGGAAGTCCAAAGAAGCCTTTGGTCTAGGGACAATTTGACCTCATTAGGAGAATCACAGTaGAAAGGAGACGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ALLGEVQRSLWSRDNLTSLGESQ*KGDVSV
Trigger: CACAGAAACGTCTCCTTTTCACTGTGATTCTCCTAA...TGAGGTCAAATTGTCCCTAGACCAAAGGCTTCTTTGGACTTCCCCTAACAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTTGTTGGCTTATACCACCACCTTaGTCAGTTATTGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VHSGRVNEIVKEVERCCWLIPPP*SVIGWE
Trigger: TTCCCAGCCAATAACTGAGCAAGGTGGTGGTATAAG...CCAACAACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCCTGTCTGTGTGCTGCTaGCTCCTCTCCTCTCACTTA +
Preference number: 4 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPILSVCC*LLSSHL
Trigger: TAAGTGAGAGGAGAGGAGGCAGCAGCACACAGACAG...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCCTGCCACTTTATGTGTaGATTTTACCAGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSLPLYV*ILPALR
Trigger: CCTCAGTGCTGGTAAAATGCACACATAAAGTGGCAG...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGGGATTCTTGCAATATTaGCTAGAGAAGGTATACAGT +
Preference number: 4 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGGFLQY*LEKVYS
Trigger: ACTGTATACCTTCTCTAGGCAATATTGCAAGAATCC...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCCACAACTGTCATCTTTaGTGGTCTTGGTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: FSWCEILYPESPKSIYPLHNCHL*WSWWLF
Trigger: AAAAAGCCACCAAGACCAGCAAAGATGACAGTTGTG...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCACACGTAGCTTGTCACTaGAGCTGTCATCTTTATTTT +
Preference number: 4 (lower is better)
Translates to: FYHQILCLAFSLLCLATAHVACH*SCHLYF
Trigger: AAAATAAAGATGACAGCTCCAGTGACAAGCTACGTG...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTTGTTGGGTTTACTGCCCTGATTaGAGGAGAGGGAGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: VHSGRVNEIVKEVERCCWVYCPD*RRGSLE
Trigger: TTCTAAACTCCCTCTCCTCCAATCAGGGCAGTAAAC...CCAACAACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCACAGACTGTAGTTCAATaGGATTCTTGCAATATTGCC +
Preference number: 4 (lower is better)
Translates to: FYHQILCLAFSLLCLATAQTVVQ*DSCNIA
Trigger: GGCAATATTGCAAGAATCCCATTGAACTACAGTCTG...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TGTGGTGTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTATCTACAAGGGCACGTaGAAAAACAAGTCCACATCG +
Preference number: 4 (lower is better)
Translates to: CGVHSGRVNEIVKEVERCIYKGT*KNKSTS
Trigger: CGATGTGGACTTGTTTTTCCACGTGCCCTTGTAGAT...ACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAACACCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp ATCCAACTCAGCAATAACCATGGAAGCCCACTGTCCTaGTCTCTTTTATCCACCCTTCCCATATTTGAGACA +
Preference number: 4 (lower is better)
Translates to: IQLSNNHGSPLS*SLLSTLPIFET
Trigger: TGTCTCAAATATGGGAAGGGTGGATAAAAGAGACAAGGACAGTGGGCTTCCATGGTTATTGCTGAGTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp CATTTTAATGGGAGGAGGAGGAACTGTAATGACTCTTaGGGTTTCTGGGTATCAGACGTTAACTTGGACCCT +
Preference number: 4 (lower is better)
Translates to: HFNGRRRNCNDS*GFWVSDVNLDP
Trigger: AGGGTCCAAGTTAACGTCTGATACCCAGAAACCCAAAGAGTCATTACAGTTCCTCCTCCTCCCATTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp GTCTGGGCTTTTAGTTGTTTAAGAGGGACAGGTAAATaGGGTTCCCAATTCATCATCATGGCCAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VWAFSCLRGTGK*GSQFIIMARSR
Trigger: TCTGCTTCTGGCCATGATGATGAATTGGGAACCCAATTTACCTGTCCCTCTTAAACAACTAAAAGCCCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTGTCAAAAGTTGTTCTTaGTTCTTTTGGGCACTAGAA +
Preference number: 4 (lower is better)
Translates to: GVIALAVCLCPLVWLGTAVKSCS*FFWALE
Trigger: TTCTAGTGCCCAAAAGAATCAAGAACAACTTTTGAC...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTTGTTGGGGAGGGTCATTTGAATaGAACATGGACCTGATTGTT +
Preference number: 4 (lower is better)
Translates to: VHSGRVNEIVKEVERCCWGGSFE*NMDLIV
Trigger: AACAATCAGGTCCATGTTTCATTCAAATGACCCTCC...CCAACAACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTCTGGGTGGATCAAATTaGTGTTCAGAGGGAATATAC +
Preference number: 4 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPLGGSN*CSEGIY
Trigger: GTATATTCCCTCTGAACAGCAATTTGATCCACCCAG...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCTTTCTAACCTCTGTATaGTCCCATTTTAATGGGAGG +
Preference number: 4 (lower is better)
Translates to: FSWCEILYPESPKSIYPLFLTSV*SHFNGR
Trigger: CCTCCCATTAAAATGGGAGCATACAGAGGTTAGAAA...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp TGTGGTGTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTTTTATTATGGTTTACTaGCCTGATTGGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CGVHSGRVNEIVKEVERCFIMVY*PDWRRG
Trigger: CCCTCTCCTCCAATCAGGGCAGTAAACCATAATAAA...ACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAACACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCGCTGACCCACTTGGCTaGTCCATAGTGTCGGATCTC +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCADPLG*SIVSDL
Trigger: GAGATCCGACACTATGGACCAGCCAAGTGGGTCAGC...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367697.7
ENST00000448741.5
ENST00000607197.6
CDS-3UTR CCA 90 bp GCATTAACATGTGATACAGTTTTTCAACTTCTGTGTTCACTCCATATGCCCATCTCAGCTTGCTCTGCTTaGCTACAGCATGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: ALTCDTVFQLLCSLHMPISACSA*LQHEMR
Trigger: CCTCATCTCATGCTGTAGCCAAGCAGAGCAAGCTGA...GATGGGCATATGGAGTGAACACAGAAGTTGAAAAACTGTATCACATGTTAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp CTCTACCCCACTGCCCTATTCTGTTCTTCATCACACTaGCCAATTTCAAGCATCTTATTTGTGTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: LYPTALFCSSSH*PISSILFVLNS
Trigger: GGAGTTCAACACAAATAAGATGCTTGAAATTGGCAAGTGTGATGAAGAACAGAATAGGGCAGTGGGGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp AAGCATGCTCTCAATTTCCATAATTTAGTGAAATCATaGGCCACCAACCCCTCCTGTCTTGAGAATAGCGTG +
Preference number: 4 (lower is better)
Translates to: KHALNFHNLVKS*ATNPSCLENSV
Trigger: CACGCTATTCTCAAGACAGGAGGGGTTGGTGGCCAATGATTTCACTAAATTATGGAAATTGAGAGCATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCATGACCCATGCATTATaGGTTATTTCTACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSMTHAL*VISTLA
Trigger: AGCCAGAGTAGAAATAACTCATAATGCATGGGTCAT...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCTCCACTCCTTGGTTCTaGAATCTATATATTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FSWCEILYPESPKSIYPLSTPWF*NLYIPV
Trigger: AACAGGAATATATAGATTTCAGAACCAAGGAGTGGA...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR TCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCAGCGTGACCTCAGCTTaGAAGCTAAGGTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCSVTSA*KLRWIL
Trigger: CAGGATCCACCTTAGCTTTCAAGCTGAGGTCACGCT...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCTTCGTAAAGCCCGTCTaGATGGCTGAATCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCFVKPV*MAESQS
Trigger: GGACTGGGATTCAGCCATCCAGACGGGCTTTACGAA...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367697.7
ENST00000448741.5
ENST00000607197.6
CDS-3UTR TCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCAAGACTAAAAGGACCTaGACCAGGCTCCACGTAGCT +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCKTKRT*TRLHVA
Trigger: AGCTACGTGGAGCCTGGTTCAGGTCCTTTTAGTCTT...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000448741.5
CDS-3UTR TCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCATCGAGACTCATCCCTaGAACATGGCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCIETHP*NMAPSM
Trigger: CATGGAAGGTGCCATGTTTCAGGGATGAGTCTCGAT...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp GATTGTTGCGCCACTTTCCTTAATAAGCCACTCGGTAACTGTAATACAGTTTCTAACCTCAATGCGATCTaGTTTCTGCCATCCTACTAT +
Preference number: 4 (lower is better)
Translates to: DCCATFLNKPLGNCNTVSNLNAI*FLPSYY
Trigger: ATAGTAGGATGGCAGAAAGCAGATCGCATTGAGGTT...AGAAACTGTATTACAGTTACCGAGTGGCTTATTAAGGAAAGTGGCGCAACAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGTTTATTGATACTATCTaGAGGGGATATCATCCAACT +
Preference number: 4 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWFIDTI*RGYHPT
Trigger: AGTTGGATGATATCCCCTCCAGATAGTATCAATAAA...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp TGTGGTGTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTTGGTTGAGTATTTGTTaGCTGTTAGCTACTTTTACC +
Preference number: 4 (lower is better)
Translates to: CGVHSGRVNEIVKEVERCWLSIC*LLATFT
Trigger: GGTAAAAGTAGCTAACAGCCAACAAATACTCAACCA...ACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAACACCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp CTACCAAGCTGCCCTAGAGCAGTGAGTCTGTATTATCTCCTGGCATTTTTCTCAAGGCAATATTTATTATaGTTTACTGCCCTGATTGGA +
Preference number: 4 (lower is better)
Translates to: LPSCPRAVSLYYLLAFFSRQYLL*FTALIG
Trigger: TCCAATCAGGGCAGTAAACCATAATAAATATTGCCT...TGAGAAAAATGCCAGGAGATAATACAGACTCACTGCTCTAGGGCAGCTTGGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp GCTTTGTTAGGGGAAGTCCAAAGAAGCCTTTGGTCTAGGGACAATTTGACCTCAAAACAAATTACTGCTTaGTCTGTCAGTTGGAAACAA +
Preference number: 4 (lower is better)
Translates to: ALLGEVQRSLWSRDNLTSKQITA*SVSWKQ
Trigger: TTGTTTCCAACTGACAGACCAAGCAGTAATTTGTTT...TGAGGTCAAATTGTCCCTAGACCAAAGGCTTCTTTGGACTTCCCCTAACAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR GCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCTCTCTCTCAGTCCCCTaGTCATCAATTCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCSLSVP*SSILAH
Trigger: GTGAGCAAGAATTGATGAGCAGGGGACTGAGAGAGA...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCATCCCAGGGGAACTCTaGGAAAAAGGTCACTCATTG +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCIPGEL*EKGHSL
Trigger: CAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGAT...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCTCCCATCCCATGTTTTaGGATCCCAAGTTTGATTCC +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCSHPMF*DPKFDS
Trigger: GGAATCAAACTTGGGATCCCAAAACATGGGATGGGA...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCTTCCTCTTCCTTCAGTaGATCATACAGGTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCFLFLQ*IIQVLQ
Trigger: TTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAA...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCGAGGGACAGGTAAATTaGGTTCCCAATTCATCATCA +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCEGQVN*VPNSSS
Trigger: TGATGATGAATTGGGAACCCAATTTACCTGTCCCTC...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
3UTR CAA 72 bp TCTCTCAGTCCCCTGCTCATCAATTCTTGCTCACTTTaGATTATATATAAAGCCTTACCCTTGTTGATTAGT +
Preference number: 4 (lower is better)
Translates to: SLSPLLINSCSL*IIYKALPLLIS
Trigger: ACTAATCAACAAGGGTAAGGCTTTATATATAATCAAAAGTGAGCAAGAATTGATGAGCAGGGGACTGAGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCCACGTAGCTTGTCACTaGAGCTGTCATCTTTATTTT +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCHVACH*SCHLYF
Trigger: AAAATAAAGATGACAGCTCCAGTGACAAGCTACGTG...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367697.7
ENST00000448741.5
ENST00000607197.6
CDS-3UTR TCA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCGTCAAAAGTTGTTCTTaGTTCTTTTGGGCACTAGAA +
Preference number: 4 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCVKSCS*FFWALE
Trigger: TTCTAGTGCCCAAAAGAATCAAGAACAACTTTTGAC...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367697.7
ENST00000448741.5
ENST00000607197.6
CDS GCA 90 bp CCCTCCTCCCGGCCGGGCTGGAGACCCGAGCCCACCCGATGCGTCTaGCTCTGGACCGCGAGGGGGCGCCGCCACCAAGGCGGGGCCGGC +
Preference number: 5 (lower is better)
Translates to: PSSRPGWRPEPTRCV*LWTARGRRHQGGAG
Trigger: GCCGGCCCCGCCTTGGTGGCGGCGCCCCCTCGCGGTCCAGAGGCAGACGCATCGGGTGGGCTCGGGTCTCCAGCCCGGCCGGGAGGAGGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS GCA 90 bp CCCGGTCCCTCCTCCCGGCCGGGCTGGAGACCCGAGCCCACCCGATaGGTCTGCCTCTGGACCGCGAGGGGGCGCCGCCACCAAGGCGGG +
Preference number: 5 (lower is better)
Translates to: PGPSSRPGWRPEPTR*VCLWTARGRRHQGG
Trigger: CCCGCCTTGGTGGCGGCGCCCCCTCGCGGTCCAGAGGCAGACGCATCGGGTGGGCTCGGGTCTCCAGCCCGGCCGGGAGGAGGGACCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS CCA 90 bp TCCCGGCCGGGCTGGAGACCCGAGCCCACCCGATGCGTCTGCCTCTaGACCGCGAGGGGGCGCCGCCACCAAGGCGGGGCCGGCTCACGA +
Preference number: 5 (lower is better)
Translates to: SRPGWRPEPTRCVCL*TARGRRHQGGAGSR
Trigger: TCGTGAGCCGGCCCCGCCTTGGTGGCGGCGCCCCCTCGCGGTCCAGAGGCAGACGCATCGGGTGGGCTCGGGTCTCCAGCCCGGCCGGGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS CCA 90 bp CCCGAGTCCCCGCTCCGCAGACCCGGTCCCTCCTCCCGGCCGGGCTaGAGACCCGAGCCCACCCGATGCGTCTGCCTCTGGACCGCGAGG +
Preference number: 5 (lower is better)
Translates to: PESPLRRPGPSSRPG*RPEPTRCVCLWTAR
Trigger: CCTCGCGGTCCAGAGGCAGACGCATCGGGTGGGCTCGGGTCTCCAGCCCGGCCGGGAGGAGGGACCGGGTCTGCGGAGCGGGGACTCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS-3UTR CAA 90 bp GGGGTGGGGCCTGAGAGTGTATTTCCTCCGAGCTCCCACATCCATGCCGGTGCTAAAGACCTGGGGATTTaGCTACGATGCAGATTCAGG +
Preference number: 5 (lower is better)
Translates to: GVGPESVFPPSSHIHAGAKDLGI*LRCRFR
Trigger: CCTGAATCTGCATCGTAGCAAAATCCCCAGGTCTTT...AGCACCGGCATGGATGTGGGAGCTCGGAGGAAATACACTCTCAGGCCCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000453452.1
CDS CCA 90 bp TCCTTGCAGCTGGATGGCATATCTTGTCTTGAAGGGGGATCTAAGTaGCACCGCTCTATGCCTGCCATGGTCCACCCCTTGCCTATGTGG +
Preference number: 5 (lower is better)
Translates to: SLQLDGISCLEGGSK*HRSMPAMVHPLPMW
Trigger: CCACATAGGCAAGGGGTGGACCATGGCAGGCATAGAGCGGTGCCACTTAGATCCCCCTTCAAGACAAGATATGCCATCCAGCTGCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GAGAGTGTATTTCCTCCGAGCTCCCACATCCATGCCGGTGCTGCTGATCAGAGACAGGCTCCACGTAGCTaGTCACTGGAGCTGTCATCT +
Preference number: 5 (lower is better)
Translates to: ESVFPPSSHIHAGAADQRQAPRS*SLELSS
Trigger: AGATGACAGCTCCAGTGACAAGCTACGTGGAGCCTG...TCTCTGATCAGCAGCACCGGCATGGATGTGGGAGCTCGGAGGAAATACACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453452.1
CDS-3UTR CAA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTCCACCCTTCCCATATTaGAGACACCCAAATCACCCA +
Preference number: 5 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSPPFPY*RHPNHP
Trigger: TGGGTGATTTGGGTGTCTCAAATATGGGAAGGGTGG...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CAGGACCCCTCGGCTGCCATTTGGAGCTTAGTGGTTAACAGGATACTGATGGCATCCTTAGCAGAGTGCTaGGAACATAGCAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: QDPSAAIWSLVVNRILMASLAEC*EHSRDS
Trigger: GGAGTCCCTGCTATGTTCCAAGCACTCTGCTAAGGA...TGCCATCAGTATCCTGTTAACCACTAAGCTCCAAATGGCAGCCGAGGGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGAAGAGCAGTGCTCTCTaGCTCAGCAAGCAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRKSSAL*LSKQCV
Trigger: CACACACTGCTTGCTGAGCAAGAGAGCACTGCTCTT...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCGGCCTTGCTTGGTCTTaGGCAAGAGGGCCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: FSWCEILYPESPKSIYPLGLAWS*ARGPPQ
Trigger: CTGAGGGGGCCCTCTTGCCAAAGACCAAGCAAGGCC...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCCGGCGTCTCCACAGCTaGGGCCGCCGCGTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCRRLHS*GRRVLG
Trigger: GCCGAGGACGCGGCGGCCCAAGCTGTGGAGACGCCG...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS-3UTR CAA 90 bp CGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCATGTGGAGAGACGTGAGGGAGGTGGAAAGATGTaGTTGGAGTTAGTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RITYRLAVQMTWHVERREGGGKM*LELVKR
Trigger: CCTCTTCACTAACTCCAACAACATCTTTCCACCTCC...CTCACGTCTCTCCACATGCCACGTCATCTGAACCGCCAGGCGATAGGTTATTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CAGGACCCCTCGGCTGCCATTTGGAGCTTAGTGGTTAACAGGATACTGATGGCAGGAAGCCCACTGTCCTaGTCTCTTTTATCCACCCTT +
Preference number: 5 (lower is better)
Translates to: QDPSAAIWSLVVNRILMAGSPLS*SLLSTL
Trigger: AAGGGTGGATAAAAGAGACAAGGACAGTGGGCTTCC...TGCCATCAGTATCCTGTTAACCACTAAGCTCCAAATGGCAGCCGAGGGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGTCATGGGGAAAGACCTaGGACACTGTCTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRSWGKT*DTVFPC
Trigger: ACAAGGGAAGACAGTGTCCAAGGTCTTTCCCCATGA...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACTTTGTTGCAGGCAGGTaGGATAGTCACAGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNFVAGR*DSHSEQ
Trigger: CTGCTCACTGTGACTATCCAACCTGCCTGCAACAAA...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp AGGATCCAGTCCCAAGAGTACGCCCCTGGCCCCTGCAGTACATGCTGCCAGGTTAGTTCAATGGGATTCTaGCAATATTGCCTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: RIQSQEYAPGPCSTCCQVSSMGF*QYCLEK
Trigger: CTTCTCTAGGCAATATTGCAAGAATCCCATTGAACT...AACCTGGCAGCATGTACTGCAGGGGCCAGGGGCGTACTCTTGGGACTGGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GGACTTTGGAATAAAATACGAATAACCTATCGCCTGGCGGTTCAGATGACGTGGCCTCTGACAGCAGGCTaGCCTCCTCCTGCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: GLWNKIRITYRLAVQMTWPLTAG*PPPAVQ
Trigger: CTGAACTGCAGGAGGAGGCAAGCCTGCTGTCAGAGG...CCACGTCATCTGAACCGCCAGGCGATAGGTTATTCGTATTTTATTCCAAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCAGTACCATGGCCTTGCTaGGTCTTTGGCAAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: FYHQILCLAFSLLCLATAVPWPC*VFGKRA
Trigger: GGCCCTCTTGCCAAAGACCAAGCAAGGCCATGGTAC...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACGATGTGAGGATGTTGTaGGGGGAATGGAGGGTCATT +
Preference number: 5 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNDVRML*GEWRVI
Trigger: AATGACCCTCCATTCCCCCAACAACATCCTCACATC...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGTGGCTACTCTACTCCTaGGGGCCCGCTTCTGTTATG +
Preference number: 5 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGWLLYS*GPASVM
Trigger: CATAACAGAAGCGGGCCCCAAGGAGTAGAGTAGCCA...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GCTTTGTTAGGGGAAGTCCAAAGAAGCCTTTGGTCTAGGGACAATTTGACCTCAATGAGGCCAGGGGCCTaGTCTGTGGTGTTCACAGTG +
Preference number: 5 (lower is better)
Translates to: ALLGEVQRSLWSRDNLTSMRPGA*SVVFTV
Trigger: CACTGTGAACACCACAGACAAGGCCCCTGGCCTCAT...TGAGGTCAAATTGTCCCTAGACCAAAGGCTTCTTTGGACTTCCCCTAACAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGGCGGCTGGTACTTTCTaGAAGGTGAATTTGAGTGGC +
Preference number: 5 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGAAGTF*KVNLSG
Trigger: GCCACTCAAATTCACCTTCAAGAAAGTACCAGCCGC...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCATGCTTGGCCTTCAGCTaGCTCTGCTTGGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: FYHQILCLAFSLLCLATACLAFS*LCLATA
Trigger: TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCA...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCTTCAGGGCCCCAGGGACCTCATTCCTTTCTCTATaGTTTGTCCCAGCCATTCAG +
Preference number: 5 (lower is better)
Translates to: AYDPLLWLEPPSFRAPGTSFLSL*FVPAIQ
Trigger: CTGAATGGCTGGGACAAACAATAGAGAAAGGAATGA...GGTCCCTGGGGCCCTGAAGGAAGGTGGTTCTAACCACAGGAGAGGATCATATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTTTCCCTCTCCCTGCTTaGCTGCCTAGAAACTGCCTC +
Preference number: 5 (lower is better)
Translates to: GVIALAVCLCPLVWLGTAFPLPA*LPRNCL
Trigger: GAGGCAGTTTCTAGGCAGCAAAGCAGGGAGAGGGAA...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CTACTCCTTGGGGCCCGCTTCTGTTATGGACCGCATCTTAAAAAGCTCCACAGGCAGCATTGGTATTTGTaGCAGGCAGGTTGGATAGTC +
Preference number: 5 (lower is better)
Translates to: LLLGARFCYGPHLKKLHRQHWYL*QAGWIV
Trigger: GACTATCCAACCTGCCTGCAACAAATACCAATGCTG...CCTGTGGAGCTTTTTAAGATGCGGTCCATAACAGAAGCGGGCCCCAAGGAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGCTATCAAGCGACCAGTaGGTCTTCACAGCCTCATCA +
Preference number: 5 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGLSSDQ*VFTASS
Trigger: TGATGAGGCTGTGAAGACCAACTGGTCGCTTGATAG...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TCCTCTCACTTACTCACCTTGGCCTCCGGTGACACTGATCTCCATCTCCTCAACTTCCTGCAAATGGTTTaGGAACCACAACTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: SSHLLTLASGDTDLHLLNFLQMV*EPQLVL
Trigger: GAGGACCAGTTGTGGTTCCAAAACCATTTGCAGGAA...GTTGAGGAGATGGAGATCAGTGTCACCGGAGGCCAAGGTGAGTAAGTGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGAGCTACCCACACTCCTaGCAGCTGGATGGCATATCT +
Preference number: 5 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGSYPHS*QLDGIS
Trigger: AGATATGCCATCCAGCTGCAAGGAGTGTGGGTAGCT...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GAGGCTGTTTTTCAAAAAGCATATGATCCTCTCCTGTGGTTAGAACCACCTTCCCACTGGACAGCCTTCTaGTGCCAGGGACTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: EAVFQKAYDPLLWLEPPSHWTAF*CQGLSV
Trigger: CACAGACAGTCCCTGGCACAAGAAGGCTGTCCAGTG...GGAAGGTGGTTCTAACCACAGGAGAGGATCATATGCTTTTTGAAAAACAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCACATCAAATCCTGTGCTaGGCCTTCAGCTTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: FYHQILCLAFSLLCLATAHQILC*AFSLLC
Trigger: GCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATG...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTGCCATGGTCCACCCCTaGCCTATGTGGATCCATTTT +
Preference number: 5 (lower is better)
Translates to: GVIALAVCLCPLVWLGTAAMVHP*PMWIHF
Trigger: AAAATGGATCCACATAGGCAAGGGGTGGACCATGGC...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGATGGCATATCTTGTCTaGAAGGGGGATCTAAGTGGC +
Preference number: 5 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGMAYLV*KGDLSG
Trigger: GCCACTTAGATCCCCCTTCAAGACAAGATATGCCAT...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CTACGATGCAGATTCAGGTCTGGGGTGGGGCCTGAGAGTGTATTTCCTCCGAGCTGTCAAAAGTTGTTCTaGATTCTTTTGGGCACTAGA +
Preference number: 5 (lower is better)
Translates to: LRCRFRSGVGPESVFPPSCQKLF*ILLGTR
Trigger: TCTAGTGCCCAAAAGAATCAAGAACAACTTTTGACA...GCTCGGAGGAAATACACTCTCAGGCCCCACCCCAGACCTGAATCTGCATCGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000453452.1
CDS-3UTR CAA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCAAAGGGAAAAGCAGGATaGAGCAGAGGAACGGTAGGA +
Preference number: 5 (lower is better)
Translates to: FYHQILCLAFSLLCLATAKGKAG*SRGTVG
Trigger: TCCTACCGTTCCTCTGCTCAATCCTGCTTTTCCCTT...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GGCGAGCTGCCATCCCAGGGGAACTCTGGGAAAAAGGTCACTCATTGGAGGAGTTTGGTTGAGTATTTGTaGGCTGTTAGCTACTTTTAC +
Preference number: 5 (lower is better)
Translates to: GELPSQGNSGKKVTHWRSLVEYL*AVSYFY
Trigger: GTAAAAGTAGCTAACAGCCAACAAATACTCAACCAA...ACTCCTCCAATGAGTGACCTTTTTCCCAGAGTTCCCCTGGGATGGCAGCTCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CTACCAAGCTGCCCTAGAGCAGTGAGTCTGTATTATCTCCTGGCATTTTTCTCACCTGAGGGACACCTTTaGCTTCATGGGGAAAGACCT +
Preference number: 5 (lower is better)
Translates to: LPSCPRAVSLYYLLAFFSPEGHL*LHGERP
Trigger: AGGTCTTTCCCCATGAAGCAAAAGGTGTCCCTCAGG...TGAGAAAAATGCCAGGAGATAATACAGACTCACTGCTCTAGGGCAGCTTGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GCTTTGTTAGGGGAAGTCCAAAGAAGCCTTTGGTCTAGGGACAATTTGACCTCAATAAACCCAGCCCCTTaGACCAAGCACCCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: ALLGEVQRSLWSRDNLTSINPAP*TKHPQD
Trigger: ATCCTGAGGGTGCTTGGTCAAAGGGGCTGGGTTTAT...TGAGGTCAAATTGTCCCTAGACCAAAGGCTTCTTTGGACTTCCCCTAACAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TATCAGACGTTAACTTGGACCCTGACGTATCCAGGTATTCCTCTTTCCCCAGGGTACAGTTTCTCTCAGTaGCCTGCTCTGACCTACCTT +
Preference number: 5 (lower is better)
Translates to: YQTLTWTLTYPGIPLSPGYSFSQ*PALTYL
Trigger: AAGGTAGGTCAGAGCAGGCAACTGAGAGAAACTGTA...CCCTGGGGAAAGAGGAATACCTGGATACGTCAGGGTCCAAGTTAACGTCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CCAAGCATTCCTCTTCCTTCAGTGGATCATACAGGTCCTCCAACAACCACAGGGAAAACTGACCATCCTTaGGCCACAGTAGCAATTAAG +
Preference number: 5 (lower is better)
Translates to: PSIPLPSVDHTGPPTTTGKTDHP*ATVAIK
Trigger: CTTAATTGCTACTGTGGCCAAAGGATGGTCAGTTTT...CCCTGTGGTTGTTGGAGGACCTGTATGATCCACTGAAGGAAGAGGAATGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCAGAAAAAGGTCACTCATaGGAGGAGTCCTGTGTTGGA +
Preference number: 5 (lower is better)
Translates to: FYHQILCLAFSLLCLATAEKGHS*EESCVG
Trigger: TCCAACACAGGACTCCTCCAATGAGTGACCTTTTTC...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CAGGACCCCTCGGCTGCCATTTGGAGCTTAGTGGTTAACAGGATACTGATGGCATTTCTCGTTTTTGCCTaGAATGTAGCTGTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: QDPSAAIWSLVVNRILMAFLVFA*NVAVQF
Trigger: AAACTGAACAGCTACATTCAAGGCAAAAACGAGAAA...TGCCATCAGTATCCTGTTAACCACTAAGCTCCAAATGGCAGCCGAGGGGTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCAAATTTAGTGAAATCATaGGCCACCAACCCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: FYHQILCLAFSLLCLATANLVKS*ATNPSC
Trigger: ACAGGAGGGGTTGGTGGCCAATGATTTCACTAAATT...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCCCTGGGTGGATCAAATaGCTGTTCAGAGGGAATATA +
Preference number: 5 (lower is better)
Translates to: FSWCEILYPESPKSIYPLPGWIK*LFRGNI
Trigger: TATATTCCCTCTGAACAGCAATTTGATCCACCCAGG...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TGTGGTGTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTAGTGTGTGCAGCTTTTaGTTCTGGGTACTGAACGTG +
Preference number: 5 (lower is better)
Translates to: CGVHSGRVNEIVKEVERCSVCSF*FWVLNV
Trigger: CACGTTCAGTACCCAGAACAAAAAGCTGCACACACT...ACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAACACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTTCTTATACCACCACCTaGCTCAGTTATTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPSYTTT*LSYWLG
Trigger: TCCCAGCCAATAACTGAGCAAGGTGGTGGTATAAGA...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTCCACAACTGTCATCTTaGCTGGTCTTGGTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPPQLSS*LVLVAF
Trigger: AAAAGCCACCAAGACCAGCAAAGATGACAGTTGTGG...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TCTCATTGGGCCTTGTCATCTATTCCACACTGCATCTTCTTTCCCCCTACCTCCTGTTCTTCATCACACTaGCCAATTTCAAGCATCTTA +
Preference number: 5 (lower is better)
Translates to: SHWALSSIPHCIFFPPTSCSSSH*PISSIL
Trigger: TAAGATGCTTGAAATTGGCAAGTGTGATGAAGAACA...GGAGGTAGGGGGAAAGAAGATGCAGTGTGGAATAGATGACAAGGCCCAATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTTCCTTTCTCTATTGTTaGTCCCAGCCATTCAGGCAT +
Preference number: 5 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPSFLYC*SQPFRH
Trigger: ATGCCTGAATGGCTGGGACAAACAATAGAGAAAGGA...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GGAGTAATTGCTCTTGCAGTTTGCTTATGTCCTCTGGTCTGGCTTGGAACTGCTGAAACAAATTACTGCTaGGTCTGTCAGTTGGAAACA +
Preference number: 5 (lower is better)
Translates to: GVIALAVCLCPLVWLGTAETNYC*VCQLET
Trigger: TGTTTCCAACTGACAGACCAAGCAGTAATTTGTTTC...AGCAGTTCCAAGCCAGACCAGAGGACATAAGCAAACTGCAAGAGCAATTACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCCAGGCTCCACGTAGCTaGTCACTGGAGCTGTCATCT +
Preference number: 5 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCQAPRS*SLELSS
Trigger: AGATGACAGCTCCAGTGACAAGCTACGTGGAGCCTG...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367697.7
ENST00000448741.5
ENST00000607197.6
CDS-3UTR CAA 90 bp TTTTACCATCAAATCCTGTGCTTGGCCTTCAGCTTGCTCTGCTTGGCTACAGCATGTCAAAAGTTGTTCTaGATTCTTTTGGGCACTAGA +
Preference number: 5 (lower is better)
Translates to: FYHQILCLAFSLLCLATACQKLF*ILLGTR
Trigger: TCTAGTGCCCAAAAGAATCAAGAACAACTTTTGACA...TGCTGTAGCCAAGCAGAGCAAGCTGAAGGCCAAGCACAGGATTTGATGGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTTGTTGGAACTGTAATGACTCTTaGGGTTTCTGGGTATCAGAC +
Preference number: 5 (lower is better)
Translates to: VHSGRVNEIVKEVERCCWNCNDS*GFWVSD
Trigger: GTCTGATACCCAGAAACCCAAAGAGTCATTACAGTT...CCAACAACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp TTCTCATGGTGTGAAATCCTCTATCCTGAGAGCCCCAAGTCAATATACCCTCTCAGGCATTTCAACATTTaGATCACTCTTTCTAGGCTT +
Preference number: 5 (lower is better)
Translates to: FSWCEILYPESPKSIYPLRHFNI*ITLSRL
Trigger: AAGCCTAGAAAGAGTGATCAAAATGTTGAAATGCCT...GAGAGGGTATATTGACTTGGGGCTCTCAGGATAGAGGATTTCACACCATGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GATTGTTGCGCCACTTTCCTTAATAAGCCACTCGGTAACTGTAATACAGTTTCTAGAGGGACAGGTAAATaGGGTTCCCAATTCATCATC +
Preference number: 5 (lower is better)
Translates to: DCCATFLNKPLGNCNTVSRGTGK*GSQFII
Trigger: GATGATGAATTGGGAACCCAATTTACCTGTCCCTCT...AGAAACTGTATTACAGTTACCGAGTGGCTTATTAAGGAAAGTGGCGCAACAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp GTTCACAGTGGGAGGGTGAATGAAATAGTTAAGGAGGTGGAAAGATGTTGTTGGAGGTCCATTTTCAGCTaGCAACTACAGAAGATAACT +
Preference number: 5 (lower is better)
Translates to: VHSGRVNEIVKEVERCCWRSIFS*QLQKIT
Trigger: AGTTATCTTCTGTAGTTGCAAGCTGAAAATGGACCT...CCAACAACATCTTTCCACCTCCTTAACTATTTCATTCACCCTCCCACTGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTTTTCTTGAAATTAGTTaGATCCTTCCAAGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPFLEIS*ILPRLV
Trigger: GACAAGCCTTGGAAGGATCAAACTAATTTCAAGAAA...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp CCTAGAGAAGGTATACAGTCTCTGAGAACTAGGACTTCTGATGCTGTAGAACCTAATTCTGCCCAGTTTTaGCAGGAAGATTGCAATTTT +
Preference number: 5 (lower is better)
Translates to: PREGIQSLRTRTSDAVEPNSAQF*QEDCNF
Trigger: AAAATTGCAATCTTCCTGCAAAAACTGGGCAGAATT...AGGTTCTACAGCATCAGAAGTCCTAGTTCTCAGAGACTGTATACCTTCTCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCGGCTTGGTTGAGTATTaGTTGGCTGTTAGCTACTTT +
Preference number: 5 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCGLVEY*LAVSYF
Trigger: AAAGTAGCTAACAGCCAACAAATACTCAACCAAGCC...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCGCAATCTGTAGTCATTaGTTCAGCAATGGGGGAAAA +
Preference number: 5 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCAICSH*FSNGGK
Trigger: TTTTCCCCCATTGCTGAACAAATGACTACAGATTGC...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607197.6
CDS-3UTR CAA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCTTTCTCGTTTTTGCCTaGAATGTAGCTGTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCFLVFA*NVAVQF
Trigger: AAACTGAACAGCTACATTCAAGGCAAAAACGAGAAA...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367697.7
ENST00000448741.5
ENST00000607197.6
CDS-3UTR CAA 90 bp ACACGCACTTTACTTATAGGTCATGTTGATGTCTATGATAAACAGATGTTTTGCTGTCAAAAGTTGTTCTaGATTCTTTTGGGCACTAGA +
Preference number: 5 (lower is better)
Translates to: TRTLLIGHVDVYDKQMFCCQKLF*ILLGTR
Trigger: TCTAGTGCCCAAAAGAATCAAGAACAACTTTTGACA...GCAAAACATCTGTTTATCATAGACATCAACATGACCTATAAGTAAAGTGCGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367697.7
ENST00000448741.5
ENST00000607197.6
CDS CCA 72 bp CGGCCGCCCCGGGGTCTGGCTGGAGCGGCTCGGCCATaGGCGGCGCTGACGCTCTGGGAGCCTGGTCAGCCG +
Preference number: 6 (lower is better)
Translates to: RPPRGLAGAARP*AALTLWEPGQP
Trigger: CGGCTGACCAGGCTCCCAGAGCGTCAGCGCCGCCCATGGCCGAGCCGCTCCAGCCAGACCCCGGGGCGGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS GCA 72 bp CGGCCGGGCTGGAGACCCGAGCCCACCCGATGCGTCTaGCTCTGGACCGCGAGGGGGCGCCGCCACCAAGGC +
Preference number: 6 (lower is better)
Translates to: RPGWRPEPTRCV*LWTARGRRHQG
Trigger: GCCTTGGTGGCGGCGCCCCCTCGCGGTCCAGAGGCAGACGCATCGGGTGGGCTCGGGTCTCCAGCCCGGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS CCA 72 bp GCTGGAGCGGCTCGGCCATGGGCGGCGCTGACGCTCTaGGAGCCTGGTCAGCCGCGCAGAGGCCCCGCACCC +
Preference number: 6 (lower is better)
Translates to: AGAARPWAALTL*EPGQPRRGPAP
Trigger: GGGTGCGGGGCCTCTGCGCGGCTGACCAGGCTCCCAGAGCGTCAGCGCCGCCCATGGCCGAGCCGCTCCAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS CCA 72 bp CCGCTCCGCAGACCCGGTCCCTCCTCCCGGCCGGGCTaGAGACCCGAGCCCACCCGATGCGTCTGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: PLRRPGPSSRPG*RPEPTRCVCLW
Trigger: CCAGAGGCAGACGCATCGGGTGGGCTCGGGTCTCCAGCCCGGCCGGGAGGAGGGACCGGGTCTGCGGAGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367697.7
ENST00000607197.6
CDS CCA 72 bp TCTCATAACTTCCGGGCAGGGCTTTCCCGAGCCGAGTaGGGTGCGGCTCTGTTCCCCAGCACCCCCTTTCCG +
Preference number: 6 (lower is better)
Translates to: SHNFRAGLSRAE*GAALFPSTPFP
Trigger: CGGAAAGGGGGTGCTGGGGAACAGAGCCGCACCCCACTCGGCTCGGGAAAGCCCTGCCCGGAAGTTATGAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448741.5
CDS TCA 72 bp ATTTCCTCCGAGCTCCCACATCCATGCCGGTGCTGCTaGTCAGAGAACTACACCAACACCCCTGTAGAAGCC +
Preference number: 6 (lower is better)
Translates to: ISSELPHPCRCC*SENYTNTPVEA
Trigger: GGCTTCTACAGGGGTGTTGGTGTAGTTCTCTGATCAGCAGCACCGGCATGGATGTGGGAGCTCGGAGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453452.1