RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEATR5A (Homo sapiens)

Ensembl gene IDs: ENSG00000129493

Ensembl transcript IDs: ENST00000382464.6, ENST00000538864.6, ENST00000543095.7, ENST00000549184.1, ENST00000549719.1, ENST00000550366.5, ENST00000550819.1, ENST00000551414.1, ENST00000552500.1

Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGGCGGGTAGGAGGCCCTaGGGAGCTGTTCAACAAAGA +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLAGRRP*GAVQQR
Trigger: TCTTTGTTGAACAGCTCCCCAGGGCCTCCTACCCGC...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGGACATGCTTTGGCAGTaGCATCAGGTGGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLDMLWQ*HQVVSL
Trigger: CAGAGACACCACCTGATGTCACTGCCAAAGCATGTC...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTCTTGATAGCACACAGTaGACCAGCTCGTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSLDSTQ*TSSSFQ
Trigger: CTGGAAGGACGAGCTGGTGCACTGTGTGCTATCAAG...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGCCTTCCAGGGTCACCTaGCATGTAAACGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLPSRVT*HVNESP
Trigger: AGGAGATTCGTTTACATGGCAGGTGACCCTGGAAGG...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGGGCTGGTCTAAGCGCTaGTCCTACATTGGCTTGATA +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLGWSKR*SYIGLI
Trigger: TATCAAGCCAATGTAGGAGCAGCGCTTAGACCAGCC...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGCAGCAAGCCAGAGTCTaGTTAGTGTGCCAAGATCTG +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLQQARV*LVCQDL
Trigger: CAGATCTTGGCACACTAAGCAGACTCTGGCTTGCTG...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGCCTGGAGAGATTAGATaGTCCTTCATCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLPGEIR*SFIWVS
Trigger: GCTGACCCAGATGAAGGAGCATCTAATCTCTCCAGG...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGGACCTAAACATCCCTTaGAGCCAGCCACGTACTTCA +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLDLNIP*SQPRTS
Trigger: TGAAGTACGTGGCTGGCTCCAAGGGATGTTTAGGTC...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTCCTTCAGCAGGAAGTTaGGAGGCAAATTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSPSAGS*EANSEG
Trigger: GCCTTCAGAATTTGCCTCCCAACTTCCTGCTGAAGG...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTCACAATGCTGTAGCATaGAGGATAAGTGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSHNAVA*RISAQE
Trigger: CTCCTGGGCACTTATCCTCCATGCTACAGCATTGTG...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTCTGACACATGGAAGTTaGTGTTACAGGCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSLTHGS*CYRPGE
Trigger: CTCTCCAGGCCTGTAACACCAACTTCCATGTGTCAG...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCGCTTCTGAAGGCATaGGATGGTAGTTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSALLKA*DGSYFW
Trigger: CCAGAAGTAACTACCATCCCATGCCTTCAGAAGCGC...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGAGCAATCCTCCCAGCTaGTCACAGTTCTTCTCGTTA +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLSNPPS*SQFFSL
Trigger: TAACGAGAAGAACTGTGATCAGCTGGGAGGATTGCT...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGGAAAGGCGACTGTTTTaGGCAGCAGAACACAGCAAA +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLERRLF*AAEHSK
Trigger: TTTGCTGTGTTCTGCTGCTCAAAACAGTCGCCTTTC...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGGTAATGCCACGGCAATaGAGTGTAAACACCAAGCTG +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLVMPRQ*SVNTKL
Trigger: CAGCTTGGTGTTTACACTGCATTGCCGTGGCATTAC...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGCCTCCAAAGATACTCTaGGAATGCTTTGACGTGAGG +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLPPKIL*ECFDVR
Trigger: CCTCACGTCAAAGCATTCGCAGAGTATCTTTGGAGG...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGGCGCTGCTCCTACATTaGCTTGATACTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLALLLH*LDTVPE
Trigger: TTCTGGAACAGTATCAAGCCAATGTAGGAGCAGCGC...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGTCAGCATATCTCCACTaGCTCGAAGGAATCCTGAAC +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLSAYLH*LEGILN
Trigger: GTTCAGGATTCCTTCGAGCCAGTGGAGATATGCTGA...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAGGGGTCCTCCTCAGCTaGGCGTGCGTCCCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSGVLLS*ACVPVQ
Trigger: CTGGACCGGGACGCACGCTCAGCTGAGGAGGACCCC...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGAGTCACTGCTTCAGGTaGAGACTTATGTCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLSHCFR*RLMSSK
Trigger: CTTACTGGACATAAGTCTTCACCTGAAGCAGTGACT...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGTCTCTTTGTACAAGCTaGCGTAAGCAAGCCAGTACT +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLSLCTS*RKQAST
Trigger: AGTACTGGCTTGCTTACGTCAGCTTGTACAAAGAGA...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTATCACTGCCAATTTTTaGTCTGGGCCAAGGTACATC +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSITANF*SGPRYI
Trigger: GATGTACCTTGGCCCAGATCAAAAATTGGCAGTGAT...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGTTTACAGCAGCAAGCTaGGCCTTTTCTCCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLFTAAS*AFSPRR
Trigger: TCTTCTTGGAGAAAAGGCTCAGCTTGCTGCTGTAAA...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGATCATTCCTGCTGGTTaGCAACAAGAGCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLIIPAG*QQELLQ
Trigger: TTGGAGAAGCTCTTGTTGGCAACCAGCAGGAATGAT...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTAGATGCTCCTTCATCTaGGTCAGCAACAACAAAACC +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSRCSFI*VSNNKT
Trigger: GGTTTTGTTGTTGCTGACCCAGATGAAGGAGCATCT...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTTTTCTGCCCGGGCCATaGGAGAAGATAATATTCCTT +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSFLPGP*EKIIFL
Trigger: AAGGAATATTATCTTCTCCCATGGCCCGGGCAGAAA...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGAGCATGGAGGATAAGTaGCCAGGAGTTGTAATAATG +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLSMEDK*PGVVIM
Trigger: CATTATTACAACTCCTGGGCACTTATCCTCCATGCT...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTACACAATTCCAGTGTTaGAAAGACCAAAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSTQFQC*KDQRLS
Trigger: GGAAAGTCTTTGGTCTTTGCAACACTGGAATTGTGT...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTATCTTTAGGAGATGCTaGAAAGACACACTTCCACAA +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSIFRRC*KDTLPQ
Trigger: TTGTGGAAGTGTGTCTTTCCAGCATCTCCTAAAGAT...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGGGATTGGTAAAAGGATaGGATTTTTCATCACGTCTG +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLGLVKG*DFSSRL
Trigger: CAGACGTGATGAAAAATCCCATCCTTTTACCAATCC...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTTGCCAATTTTTGATCTaGGCCAAGGTACATCTAGAA +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSCQFLI*AKVHLE
Trigger: TTCTAGATGTACCTTGGCCCAGATCAAAAATTGGCA...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCACAGACGGCATCGATCTaGGTTTGGGTGGCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAQTASI*VWVALG
Trigger: CCCTAAAGCCACCCAAACTCAGATCGATGCCGTCTG...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGGAGAGTTTTTCCACTaGCATAGATGTAAGCATATA +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSGEFFH*HRCKHI
Trigger: TATATGCTTACATCTATGGCAGTGGAAAAACTCTCC...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGTCTCTTTGATATCATaGCATAATCTCTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSVSLIS*HNLSSV
Trigger: GACAGATGAGAGATTATGCCATGATATCAAAGAGAC...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGCCAGCTTGTGTGCGCTaGGCTGAAAGGCGACTGTTT +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKPACVR*AERRLF
Trigger: AAACAGTCGCCTTTCAGCTCAGCGCACACAAGCTGG...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGGACCCCAAGGCCAATaGGTGTCCTGTTCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKGPQGQ*VSCSGN
Trigger: GTTACCAGAACAGGACACTCATTGGCCTTGGGGTCC...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCACGGAGCTGGTCACTGTaGTCTGTGGCAGCCATAAAA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKARSWSL*SVAAIK
Trigger: TTTTATGGCTGCCACAGATCACAGTGACCAGCTCCG...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGACATGCTTTGGCAGTaGCATCAGGTGGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIDMLWQ*HQVVSL
Trigger: CAGAGACACCACCTGATGTCACTGCCAAAGCATGTC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCACAGGCACTGCAAACCTaGCATGCTTTGGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAQALQT*HALAVT
Trigger: TGTCACTGCCAAAGCATGTCAGGTTTGCAGTGCCTG...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAACTCTGCGAATGCTTTaGCGTGAGGCTGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKATLRML*REAAVP
Trigger: AGGAACAGCAGCCTCACGTCAAAGCATTCGCAGAGT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTTTTCTAAGACCTTTATaGCTTCTTGGAAGATCTCAA +
Preference number: 4 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSFLRPL*LLGRSQ
Trigger: TTGAGATCTTCCAAGAAGGCATAAAGGTCTTAGAAA...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAAGGGATGAGCCACTGTaGCGGGCCAAAGCAGAATTT +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKARDEPL*RAKAEF
Trigger: AAATTCTGCTTTGGCCCGGCACAGTGGCTCATCCCT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAGCTGAAGGCAAGAGATaGCCTGAGCTTGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAAEGKR*PELEQG
Trigger: GCCTTGTTCAAGCTCAGGCCATCTCTTGCCTTCAGC...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGTGTACTATTGTATACTaGATAATCCTAGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLCTIVY*IILDQV
Trigger: AACCTGGTCTAGGATTATCCAGTATACAATAGTACA...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCACTGCTACAGCAAAACTaGAGCCAGTCACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKALLQQN*SQSLLQ
Trigger: CTGAAGCAGTGACTGGCTTCAGTTTTGCTGTAGCAG...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGTTGTGTGCGCTGAGCTaGAAGGCGACTGTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKLCALS*KATVLS
Trigger: GCTCAAAACAGTCGCCTTTCAGCTCAGCGCACACAA...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGCACATCAGGAGAAGTaGTGTCCTGCGCCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIAHQEK*CPAPKY
Trigger: ATACTTTGGCGCAGGACAGCACTTCTCCTGATGTGC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGGCTGGTCTAAGCGCTaGTCCTACATTGGCTTGATA +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIGWSKR*SYIGLI
Trigger: TATCAAGCCAATGTAGGAGCAGCGCTTAGACCAGCC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAGAAAGGCGACTGTTTTaGGCAGCAGAACACAGCAAA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAERRLF*AAEHSK
Trigger: TTTGCTGTGTTCTGCTGCTCAAAACAGTCGCCTTTC...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAGCTTGTGTGCGCTaGGCTGAAAGGCGACTGTTT +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSPACVR*AERRLF
Trigger: AAACAGTCGCCTTTCAGCTCAGCGCACACAAGCTGG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGAGAACTCGAGCAAGGTaGTGGCTAACAACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKRTRAR*WLTTAG
Trigger: TCCTGCAGTTGTTAGCCATCACCTTGCTCGAGTTCT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAGGTGGAAGAAGACGCTaGGTTACTTCCTCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAGGRRR*VTSSVR
Trigger: TCTTACTGAGGAAGTAACTCAGCGTCTTCTTCCACC...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGATCAGGTGGTGTCTCTaGAGTGAAGGCTGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKIRWCL*SEGWSK
Trigger: CTTAGACCAGCCTTCACTTCAGAGACACCACCTGAT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCCCAGATGATGAACCCTaGCACATGGAAGTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIPDDEP*HMEVGV
Trigger: AACACCAACTTCCATGTGTCAGGGTTCATCATCTGG...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGGAGCTGGTAGGTCTTaGTTTGTACCACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIGAGRS*FVPQDL
Trigger: AAGATCCTGTGGTACAAATCAAGACCTACCAGCTCC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAGGAGCTGGTAGGTCTTaGTTTGTACCACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAGAGRS*FVPQDL
Trigger: AAGATCCTGTGGTACAAATCAAGACCTACCAGCTCC...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCATGCTCCCAACAAAGCTaGTACAGCAAAACTGAAGCC +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKACSQQS*YSKTEA
Trigger: GGCTTCAGTTTTGCTGTAGCAGCTTTGTTGGGAGCA...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCATTGCTATCCAGGCACTaGAAACCTGACATGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKALLSRH*KPDMLW
Trigger: CCAAAGCATGTCAGGTTTGCAGTGCCTGGATAGCAA...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCCCAAGTCCTGATCACTaGCAATTTTTGATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIPSPDH*QFLIWA
Trigger: GGCCCAGATCAAAAATTGGCAGTGATCAGGACTTGG...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCACTTGGCCTTCCAAAGTaGTGGAATTACAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKALGLPK*WNYRDE
Trigger: CTCATCCCTGTAATTCCAGCACTTTGGAAGGCCAAG...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAAGCACAAGGAAGTGGTaGAAGAAGACGCTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKASTRKW*KKTLSY
Trigger: GTAACTCAGCGTCTTCTTCCACCACTTCCTTGTGCT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGACCTAAACATCCCTTaGAGCCAGCCACGTACTTCA +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKDLNIP*SQPRTS
Trigger: TGAAGTACGTGGCTGGCTCCAAGGGATGTTTAGGTC...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAATCTCAGCAAGGGGTTaGGGCTTTCTAGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSISARG*GFLGLP
Trigger: TGGGAGCCCTAGAAAGCCCCAACCCCTTGCTGAGAT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAGCGCTGCTCCTACATTaGCTTGATACTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAALLLH*LDTVPE
Trigger: TTCTGGAACAGTATCAAGCCAATGTAGGAGCAGCGC...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGCACAATGCTGTAGCATaGAGGATAAGTGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKHNAVA*RISAQE
Trigger: CTCCTGGGCACTTATCCTCCATGCTACAGCATTGTG...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGCTGACACATGGAAGTTaGTGTTACAGGCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKLTHGS*CYRPGE
Trigger: CTCTCCAGGCCTGTAACACCAACTTCCATGTGTCAG...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCGCTTCTGAAGGCATaGGATGGTAGTTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKALLKA*DGSYFW
Trigger: CCAGAAGTAACTACCATCCCATGCCTTCAGAAGCGC...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCTCTCTTTGTACAAGCTaGCGTAAGCAAGCCAGTACT +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMISLCTS*RKQAST
Trigger: AGTACTGGCTTGCTTACGTCAGCTTGTACAAAGAGA...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCATGTTCCAGAATCACATaGCCTGGAAACTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKACSRIT*PGNSGS
Trigger: AGAACCAGAGTTTCCAGGTCATGTGATTCTGGAACA...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACAGGCACTGCAAACCTaGCATGCTTTGGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSQALQT*HALAVT
Trigger: TGTCACTGCCAAAGCATGTCAGGTTTGCAGTGCCTG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGCTGGATTTGGATACTaGAAGATGGAATGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIAGFGY*KMECRS
Trigger: GCTCCTACATTCCATCTTTCAGTATCCAAATCCAGC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAACTTTGACACTTTCCTaGTTGCCCTTTATAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKATLTLS*LPFIAA
Trigger: GGCTGCTATAAAGGGCAATCAGGAAAGTGTCAAAGT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGCGAATGCTTTGACGTaGGGCTGCTGTTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLANALT*GCCSWM
Trigger: CATCCAGGAACAGCAGCCTCACGTCAAAGCATTCGC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACTTGATAGCACACAGTaGACCAGCTCGTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSLDSTQ*TSSSFQ
Trigger: CTGGAAGGACGAGCTGGTGCACTGTGTGCTATCAAG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCCAGTCTGGGTTATCTTaGATTACTGCACAACCCAGT +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIQSGLS*ITAQPS
Trigger: ACTGGGTTGTGCAGTAATGCAAGATAACCCAGACTG...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGACTGCAAACCTGACATaGTTTGGCAGTGACATCAGG +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKTANLT*FGSDIR
Trigger: CCTGATGTCACTGCCAAAGCATGTCAGGTTTGCAGT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCACTTACAACTCCACTTaGTATCCAGGCACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMITYNST*YPGTAN
Trigger: GTTTGCAGTGCCTGGATAGCAAGTGGAGTTGTAAGT...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAAGCTTCCAGATGGCCTaGCAAATATCCTTTACAGCA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKASFQMA*QISFTA
Trigger: TGCTGTAAAGGATATTTGCCAGGCCATCTGGAAGCT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAATCTCAGCAAGGGGTTaGGGCTTTCTAGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLISARG*GFLGLP
Trigger: TGGGAGCCCTAGAAAGCCCCAACCCCTTGCTGAGAT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATTTTTCATCACGTCTaGTGGTCAGGACTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAIFHHV*WSGLRH
Trigger: ATGCCTCAGTCCTGACCACCAGACGTGATGAAAAAT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCCGTAGCTTTTACTCCTaGGCTACCTGTCAATTTAGG +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIRSFYS*ATCQFR
Trigger: CCTAAATTGACAGGTAGCCCAGGAGTAAAAGCTACG...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCATTATCGATTGCTTCATaGACGGAGAATGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKALSIAS*TENVSP
Trigger: TGGAGACACATTCTCCGTTCATGAAGCAATCGATAA...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACTGCTACAGCAAAACTaGAGCCAGTCACTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSLLQQN*SQSLLQ
Trigger: CTGAAGCAGTGACTGGCTTCAGTTTTGCTGTAGCAG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTATCTGGTGGTCAGGACTaGGGCATCATCCCCTTTATC +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLSGGQD*GIIPFI
Trigger: GATAAAGGGGATGATGCCTCAGTCCTGACCACCAGA...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTACGGAGCTGGTCACTGTaGTCTGTGGCAGCCATAAAA +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLRSWSL*SVAAIK
Trigger: TTTTATGGCTGCCACAGATCACAGTGACCAGCTCCG...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGTGTTCCAGAATCACATaGCCTGGAAACTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKCSRIT*PGNSGS
Trigger: AGAACCAGAGTTTCCAGGTCATGTGATTCTGGAACA...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAATCAGGTGGTGTCTCTaGAGTGAAGGCTGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSIRWCL*SEGWSK
Trigger: CTTAGACCAGCCTTCACTTCAGAGACACCACCTGAT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGTCAAGTGAAGCCAACTaGATGGAAGGTGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKSSEAN*MEGDSL
Trigger: CAGAGAATCACCTTCCATTCAGTTGGCTTCACTTGA...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAGATAACCAATGCAGCTaGAACCAATCTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKADNQCS*NQSTSI
Trigger: GATGGAAGTAGATTGGTTTCAGCTGCATTGGTTATC...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCTTCCAGGGTCACCTaGCATGTAAACGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSPSRVT*HVNESP
Trigger: AGGAGATTCGTTTACATGGCAGGTGACCCTGGAAGG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGAATTATGTAGACCTCTaGCCAGGCTTTAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKNYVDL*PGFKHS
Trigger: GCTGTGCTTAAAGCCTGGGCAGAGGTCTACATAATT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAGAGTCTGCTTAGTGTaGCAAGATCTGCATAGACTA +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIRVCLV*QDLHRL
Trigger: TAGTCTATGCAGATCTTGGCACACTAAGCAGACTCT...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACAGCAAGCCAGAGTCTaGTTAGTGTGCCAAGATCTG +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSQQARV*LVCQDL
Trigger: CAGATCTTGGCACACTAAGCAGACTCTGGCTTGCTG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCATTTTCACTAGTCTCTaGTGTGTAGAAAGCACCACC +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIIFTSL*CVESTT
Trigger: GGTGGTGCTTTCTACACAGCAGAGACTAGTGAAAAT...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAGCATGGAGGATAAGTaGCCAGGAGTTGTAATAATG +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMISMEDK*PGVVIM
Trigger: CATTATTACAACTCCTGGGCACTTATCCTCCATGCT...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCTGGAGAGATTAGATaGTCCTTCATCTGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSPGEIR*SFIWVS
Trigger: GCTGACCCAGATGAAGGAGCATCTAATCTCTCCAGG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGCAGCACAGATAATCTaGCTTACCACTTCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIAAQII*LTTSSE
Trigger: TTCACTTGAAGTGGTAAGGCAGATTATCTGTGCTGC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCTCTGATGTTAGCATCTaGAGTCAACTCTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMISDVSI*SQLFSA
Trigger: AGCAGAGAAGAGTTGACTCCAGATGCTAACATCAGA...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGACCTGGAAACTCTaGTTCTGGAACAGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAMTWKL*FWNSCK
Trigger: TTTGCAACTGTTCCAGAACCAGAGTTTCCAGGTCAT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCTTCAGCAGGAAGTTaGGAGGCAAATTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSPSAGS*EANSEG
Trigger: GCCTTCAGAATTTGCCTCCCAACTTCCTGCTGAAGG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGTGAAGCCAACTGAATaGAAGGTGATTCTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIVKPTE*KVILWL
Trigger: TAACCAGAGAATCACCTTCCATTCAGTTGGCTTCAC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAACCTTTATGCCTTCTTaGAAGATCTCAAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKATFMPS*KISSSA
Trigger: TGCTGAGCTTGAGATCTTCCAAGAAGGCATAAAGGT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAAGGATGAAGAATAACTaGCAAGATACTGTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKARMKNN*QDTVKE
Trigger: CTCCTTGACAGTATCTTGTCAGTTATTCTTCATCCT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAGGTGGAAGAAGACGCTaGGTTACTTCCTCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSGGRRR*VTSSVR
Trigger: TCTTACTGAGGAAGTAACTCAGCGTCTTCTTCCACC...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAGTATTGAAGAAAGCTaGGTTAGCAAATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMISIEES*VSKSTA
Trigger: TGCTGTGGATTTGCTAACTCAGCTTTCTTCAATACT...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAAACCACATCCCTTGCTaGTTTCAATTTGTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKANHIPC*FQFVKA
Trigger: AGCTTTGACAAATTGAAATCAGCAAGGGATGTGGTT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGGCCAGCAGAATCAATaGTCAATGATAGAGAATGTA +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIGQQNQ*SMIENV
Trigger: TACATTCTCTATCATTGATCATTGATTCTGCTGGCC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAGCTGTAAAATCAGCTaGTGCAGCAAGTACATCTTT +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMISCKIS*CSKYIF
Trigger: AAAGATGTACTTGCTGCATCAGCTGATTTTACAGCT...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAGAGGTCCAATTTGCATaGGATTTTGTAGAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAEVQFA*DFVEQS
Trigger: ACTTTGCTCTACAAAATCTCATGCAAATTGGACCTC...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGAGTTCGAAGAATAAATaGAACACAACGGCGACAGCA +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKSSKNK*NTTATA
Trigger: TGCTGTCGCCGTTGTGTTTCATTTATTCTTCGAACT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACTCGAACATCCCTACTaGCTGAACTGGTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSLEHPY*LNWFLS
Trigger: TGAAAGGAACCAGTTCAGTCAGTAGGGATGTTCGAG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAGTAATGCCACGGCAATaGAGTGTAAACACCAAGCTG +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSVMPRQ*SVNTKL
Trigger: CAGCTTGGTGTTTACACTGCATTGCCGTGGCATTAC...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGCACATCAGGAGAAGTaGTGTCCTGCGCCAAAGTAT +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLAHQEK*CPAPKY
Trigger: ATACTTTGGCGCAGGACAGCACTTCTCCTGATGTGC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGTGGTTCTGGAACAGTTaGAAATCGCCGAATAACAAC +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKWFWNS*KSPNNN
Trigger: GTTGTTATTCGGCGATTTGCAACTGTTCCAGAACCA...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAAGCAAAATCCTGAAGTaGAGCAAGCCAGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSSKILK*SKPESA
Trigger: AGCAGACTCTGGCTTGCTGCACTTCAGGATTTTGCT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGATTTTCACTAGTCTCTaGTGTGTAGAAAGCACCACC +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKIFTSL*CVESTT
Trigger: GGTGGTGCTTTCTACACAGCAGAGACTAGTGAAAAT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGTAAACAAGCAGTTATaGTTTCCATGGTTGCATCTG +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIVNKQL*FPWLHL
Trigger: CAGATGCAACCATGGAAAGCATAACTGCTTGTTTAC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCATTCAGGAGAGCACACTaGAGGAAGTTCGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSFRRAH*RKFGKD
Trigger: ATCCTTTCCGAACTTCCTGCAGTGTGCTCTCCTGAA...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCATTCAAGGAGACACTTTaGAGCAGCACAACGAACAGC +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSFKETL*SSTTNS
Trigger: GCTGTTCGTTGTGCTGCTGCAAAGTGTCTCCTTGAA...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAAAGATACTCTGCGAATaGTTTGACGTGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSKILCE*FDVRLL
Trigger: CAGCAGCCTCACGTCAAAGCATTCGCAGAGTATCTT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTAGTACGGCTCTTTTCTaGCCGGGCCATGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIISTALF*PGHGRR
Trigger: TCTTCTCCCATGGCCCGGGCAGAAAAGAGCCGTACT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAAGTGGGAAGATAACTTaGAGAATCATCTTTGCTACG +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKASGKIT*RIIFAT
Trigger: CGTAGCAAAGATGATTCTCCAAGTTATCTTCCCACT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACAAACCAGCATATGTTaGCTAGCGGCTACATCTGTG +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSQTSIC*LAATSV
Trigger: CACAGATGTAGCCGCTAGCCAACATATGCTGGTTTG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAGAAGATCACCACAGTaGGAAACAAAGCTCTTGATA +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIRRSPQ*ETKLLI
Trigger: TATCAAGAGCTTTGTTTCCCACTGTGGTGATCTTCT...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCATCATCTACCACTTaGGCTAATCTAGCCCATGAC +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSPSSTT*ANLAHD
Trigger: GTCATGGGCTAGATTAGCCCAAGTGGTAGATGATGG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGTTGAACAAGGCAGTCTaGGTTATCTTGCATTACTGC +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKLNKAV*VILHYC
Trigger: GCAGTAATGCAAGATAACCCAGACTGCCTTGTTCAA...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCATTTCATCACGTCTGGTaGTCAGGACTGAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSFHHVW*SGLRHH
Trigger: ATGATGCCTCAGTCCTGACCACCAGACGTGATGAAA...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGGATTGGTAAAAGGATaGGATTTTTCATCACGTCTG +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIGLVKG*DFSSRL
Trigger: CAGACGTGATGAAAAATCCCATCCTTTTACCAATCC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCATGGAAACTCTGGTTCTaGAACAGTTGCAAATCGCCG +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSWKLWF*NSCKSP
Trigger: CGGCGATTTGCAACTGTTCCAGAACCAGAGTTTCCA...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGTTGGATACTGAAAGATaGAATGTAGGAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKLDTER*NVGAGR
Trigger: CCTACCAGCTCCTACATTCCATCTTTCAGTATCCAA...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAGGAAACAGCTGGATTTaGATACTGAAAGATGGAATG +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAGNSWI*ILKDGM
Trigger: CATTCCATCTTTCAGTATCCAAATCCAGCTGTTTCC...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGGAAACAGCTGGATTTaGATACTGAAAGATGGAATG +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIGNSWI*ILKDGM
Trigger: CATTCCATCTTTCAGTATCCAAATCCAGCTGTTTCC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCATGCCAAGATTGTGTATaGGATTTCCAAGTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKACQDCV*DFQVLV
Trigger: TACAAGAACTTGGAAATCTCATACACAATCTTGGCA...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGAGGATGAAGAATAACTaGCAAGATACTGTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKRMKNN*QDTVKE
Trigger: CTCCTTGACAGTATCTTGTCAGTTATTCTTCATCCT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTTTGTGTGCGCTGAGCTaGAAGGCGACTGTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIILCALS*KATVLS
Trigger: GCTCAAAACAGTCGCCTTTCAGCTCAGCGCACACAA...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGGCCAGCAGAATCAATaGTCAATGATAGAGAATGTA +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKGQQNQ*SMIENV
Trigger: TACATTCTCTATCATTGATCATTGATTCTGCTGGCC...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTTCTGGTGGTCAGGACTaGGGCATCATCCCCTTTATC +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIISGGQD*GIIPFI
Trigger: GATAAAGGGGATGATGCCTCAGTCCTGACCACCAGA...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGAACATGATCCATTTCTaGTACCGTCTTCTAAACAGG +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKNMIHF*YRLLNR
Trigger: CCTGTTTAGAAGACGGTATCAGAAATGGATCATGTT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAAAAAGAGCAAAATCCTaGAGTGCAGCAAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSKRAKS*SAASQS
Trigger: ACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTTTT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTACCAGATGATGAACCCTaGCACATGGAAGTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLPDDEP*HMEVGV
Trigger: AACACCAACTTCCATGTGTCAGGGTTCATCATCTGG...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCATCAAGTGAAGCCAACTaGATGGAAGGTGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSSSEAN*MEGDSL
Trigger: CAGAGAATCACCTTCCATTCAGTTGGCTTCACTTGA...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCATCCTTCACATGTTCTTaGGCAGCACAGATAATCTGC +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSSFTCS*AAQIIC
Trigger: GCAGATTATCTGTGCTGCTCAAGAACATGTGAAGGA...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGCATTATGGAAGTTGCTaGTCCCAGAGAATTTTCATC +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKHYGSC*SQRIFI
Trigger: GATGAAAATTCTCTGGGATCAGCAACTTCCATAATG...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAAACATCCCTACTGACTaGACTGGTTCCTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSNIPTD*TGSFQH
Trigger: ATGCTGAAAGGAACCAGTTCAGTCAGTAGGGATGTT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAGATGGTGGAAAACCATaGTATAGACACCAAATCTTA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKADGGKP*YRHQIL
Trigger: TAAGATTTGGTGTCTATATCATGGTTTTCCACCATC...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACAGTCTGGGTTATCTTaGATTACTGCACAACCCAGT +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSQSGLS*ITAQPS
Trigger: ACTGGGTTGTGCAGTAATGCAAGATAACCCAGACTG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCATCTCCTTCTTCTTCTTaGATTGTATCCACACAAGTT +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKASPSSS*IVSTQV
Trigger: AACTTGTGTGGATACAATGCAAGAAGAAGAAGGAGA...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAAGCAATGTCAAAATGTaGACTGTTAGCATTCTCACA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKASNVKM*TVSILT
Trigger: TGTGAGAATGCTAACAGTGCACATTTTGACATTGCT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAACTGCAAACCTGACATaGTTTGGCAGTGACATCAGG +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLTANLT*FGSDIR
Trigger: CCTGATGTCACTGCCAAAGCATGTCAGGTTTGCAGT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTATTGCTATCCAGGCACTaGAAACCTGACATGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLLLSRH*KPDMLW
Trigger: CCAAAGCATGTCAGGTTTGCAGTGCCTGGATAGCAA...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAACTTACAACTCCACTTaGTATCCAGGCACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSTYNST*YPGTAN
Trigger: GTTTGCAGTGCCTGGATAGCAAGTGGAGTTGTAAGT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGTAAACAAGCAGTTATaGTTTCCATGGTTGCATCTG +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKVNKQL*FPWLHL
Trigger: CAGATGCAACCATGGAAAGCATAACTGCTTGTTTAC...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGACACAATTCCAGTGTTaGAAAGACCAAAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKTQFQC*KDQRLS
Trigger: GGAAAGTCTTTGGTCTTTGCAACACTGGAATTGTGT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTAGCAACGTTACCGGCTaGTCTGCTAACCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIISNVTG*SANPSR
Trigger: TCTGCTAGGGTTAGCAGAGCAGCCGGTAACGTTGCT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAAGCTTCCAGATGGCCTaGCAAATATCCTTTACAGCA +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSSFQMA*QISFTA
Trigger: TGCTGTAAAGGATATTTGCCAGGCCATCTGGAAGCT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAAGCACAAGGAAGTGGTaGAAGAAGACGCTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLSTRKW*KKTLSY
Trigger: GTAACTCAGCGTCTTCTTCCACCACTTCCTTGTGCT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGATGCACATAATAGAGTaGGCCAGCAGAATCAATGAT +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKMHIIE*ASRIND
Trigger: ATCATTGATTCTGCTGGCCCACTCTATTATGTGCAT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTGCTGAAGGCAAGAGATaGCCTGAGCTTGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIAEGKR*PELEQG
Trigger: GCCTTGTTCAAGCTCAGGCCATCTCTTGCCTTCAGC...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTATTTCATCACGTCTGGTaGTCAGGACTGAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLFHHVW*SGLRHH
Trigger: ATGATGCCTCAGTCCTGACCACCAGACGTGATGAAA...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTATGGAAACTCTGGTTCTaGAACAGTTGCAAATCGCCG +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLWKLWF*NSCKSP
Trigger: CGGCGATTTGCAACTGTTCCAGAACCAGAGTTTCCA...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAAGATGCTCCTTCATCTaGGTCAGCAACAACAAAACC +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSRCSFI*VSNNKT
Trigger: GGTTTTGTTGTTGCTGACCCAGATGAAGGAGCATCT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAATGAACCCTGACACATaGAAGTTGGTGTTACAGGCC +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLMNPDT*KLVLQA
Trigger: GGCCTGTAACACCAACTTCCATGTGTCAGGGTTCAT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGTGCCAATTTTTGATCTaGGCCAAGGTACATCTAGAA +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKCQFLI*AKVHLE
Trigger: TTCTAGATGTACCTTGGCCCAGATCAAAAATTGGCA...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAAGTCACTGCTTCAGGTaGAGACTTATGTCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLSHCFR*RLMSSK
Trigger: CTTACTGGACATAAGTCTTCACCTGAAGCAGTGACT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTAGAACTCGAGCAAGGTaGTGGCTAACAACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIRTRAR*WLTTAG
Trigger: TCCTGCAGTTGTTAGCCATCACCTTGCTCGAGTTCT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGTTGTCAAAGCTAACTTaGGCTAATCCAGCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKLSKLT*ANPAVK
Trigger: TTTTACTGCTGGATTAGCTCAAGTTAGCTTTGACAA...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGCTCCTACATTGGCTTaGTACTGTTCCAGAATCACA +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLAPTLA*YCSRIT
Trigger: TGTGATTCTGGAACAGTATCAAGCCAATGTAGGAGC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAAAAAGAGCAAAATCCTaGAGTGCAGCAAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLKRAKS*SAASQS
Trigger: ACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTTTT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAATCACTGCCAATTTTTaGTCTGGGCCAAGGTACATC +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLITANF*SGPRYI
Trigger: GATGTACCTTGGCCCAGATCAAAAATTGGCAGTGAT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTATCCTTCACATGTTCTTaGGCAGCACAGATAATCTGC +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLSFTCS*AAQIIC
Trigger: GCAGATTATCTGTGCTGCTCAAGAACATGTGAAGGA...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGCTGGATTTGGATACTaGAAGATGGAATGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLAGFGY*KMECRS
Trigger: GCTCCTACATTCCATCTTTCAGTATCCAAATCCAGC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGAAAACAGATGAATACTaGGGTCCAATTTGCATGAGA +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKKTDEY*GPICMR
Trigger: TCTCATGCAAATTGGACCTCAGTATTCATCTGTTTT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAAGGACAATGTTTTACTaGTCCCAACAAAGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSRTMFY*SQQSCY
Trigger: GTAGCAGCTTTGTTGGGAGCAGTAAAACATTGTCCT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCTTTCTAAGACCTTTATaGCTTCTTGGAAGATCTCAA +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIFLRPL*LLGRSQ
Trigger: TTGAGATCTTCCAAGAAGGCATAAAGGTCTTAGAAA...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCATCTGATGTTAGCATCTaGAGTCAACTCTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSSDVSI*SQLFSA
Trigger: AGCAGAGAAGAGTTGACTCCAGATGCTAACATCAGA...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAATGACCTGGAAACTCTaGTTCTGGAACAGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSMTWKL*FWNSCK
Trigger: TTTGCAACTGTTCCAGAACCAGAGTTTCCAGGTCAT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCTGGAAGGTGATTCTCTaGTTAAAATTACTCGATGTA +
Preference number: 4 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIWKVIL*LKLLDV
Trigger: TACATCGAGTAATTTTAACCAGAGAATCACCTTCCA...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCATGGAAGGTGATTCTCTaGTTAAAATTACTCGATGTA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAWKVIL*LKLLDV
Trigger: TACATCGAGTAATTTTAACCAGAGAATCACCTTCCA...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAGTGAAGCCAACTGAATaGAAGGTGATTCTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSVKPTE*KVILWL
Trigger: TAACCAGAGAATCACCTTCCATTCAGTTGGCTTCAC...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTACGTAGCTTTTACTCCTaGGCTACCTGTCAATTTAGG +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLRSFYS*ATCQFR
Trigger: CCTAAATTGACAGGTAGCCCAGGAGTAAAAGCTACG...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAGATGGTAGTTACTTCTaGACTGGTAGACAAAATAAA +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKADGSYF*TGRQNK
Trigger: TTTATTTTGTCTACCAGTCCAGAAGTAACTACCATC...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAAAAATCAGAGGAAACTaGTCTTTAATTGGATGCTTG +
Preference number: 4 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAKIRGN*SLIGCL
Trigger: CAAGCATCCAATTAAAGACCAGTTTCCTCTGATTTT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGACTTCATCAAGTTCTTaGTGTGTTTCATCAACTGGA +
Preference number: 4 (lower is better)
Translates to: STRPLRALVSTMSLLSPKTSSSS*CVSSTG
Trigger: TCCAGTTGATGAAACACACCAAGAACTTGATGAAGT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAATCTTGCCTTTTCCATaGGGAATTCCTAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSILPFP*GIPKGQ
Trigger: TTGTCCTTTAGGAATTCCTCATGGAAAAGGCAAGAT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACATTATGGAAGTTGCTaGTCCCAGAGAATTTTCATC +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSHYGSC*SQRIFI
Trigger: GATGAAAATTCTCTGGGATCAGCAACTTCCATAATG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTATGGTTCTGGAACAGTTaGAAATCGCCGAATAACAAC +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLWFWNS*KSPNNN
Trigger: GTTGTTATTCGGCGATTTGCAACTGTTCCAGAACCA...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTCCAAGTCCTGATCACTaGCAATTTTTGATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIPSPDH*QFLIWA
Trigger: GGCCCAGATCAAAAATTGGCAGTGATCAGGACTTGG...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGCAGCACAGATAATCTaGCTTACCACTTCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLAAQII*LTTSSE
Trigger: TTCACTTGAAGTGGTAAGGCAGATTATCTGTGCTGC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTTTCAGGAGAGCACACTaGAGGAAGTTCGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIFRRAH*RKFGKD
Trigger: ATCCTTTCCGAACTTCCTGCAGTGTGCTCTCCTGAA...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAAACAATAAAAATCTTTaGGGGTCCTCCTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLNNKNL*GSSSAE
Trigger: CTCAGCTGAGGAGGACCCCCAAAGATTTTTATTGTT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAATCTTTAGGAGATGCTaGAAAGACACACTTCCACAA +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSIFRRC*KDTLPQ
Trigger: TTGTGGAAGTGTGTCTTTCCAGCATCTCCTAAAGAT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTATTGAACAAGGCAGTCTaGGTTATCTTGCATTACTGC +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLLNKAV*VILHYC
Trigger: GCAGTAATGCAAGATAACCCAGACTGCCTTGTTCAA...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTATGAACCCTGACACATaGAAGTTGGTGTTACAGGCC +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIMNPDT*KLVLQA
Trigger: GGCCTGTAACACCAACTTCCATGTGTCAGGGTTCAT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTATTGGATACTGAAAGATaGAATGTAGGAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLLDTER*NVGAGR
Trigger: CCTACCAGCTCCTACATTCCATCTTTCAGTATCCAA...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTACTGTCGAAGATAACTaGCCCCCAGGTAACTTCACA +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIITVEDN*PPGNFT
Trigger: TGTGAAGTTACCTGGGGGCCAGTTATCTTCGACAGT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAGTGTGTTTCATCAACTaGATCCCAACAGTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSVCFIN*IPTVKN
Trigger: ATTCTTGACTGTTGGGATCCAGTTGATGAAACACAC...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAAGCTGTAAAATCAGCTaGTGCAGCAAGTACATCTTT +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLSCKIS*CSKYIF
Trigger: AAAGATGTACTTGCTGCATCAGCTGATTTTACAGCT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTGCTCCTACATTGGCTTaGTACTGTTCCAGAATCACA +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIAPTLA*YCSRIT
Trigger: TGTGATTCTGGAACAGTATCAAGCCAATGTAGGAGC...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAAACATGATCCATTTCTaGTACCGTCTTCTAAACAGG +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLNMIHF*YRLLNR
Trigger: CCTGTTTAGAAGACGGTATCAGAAATGGATCATGTT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGAGGTCCAATTTGCATaGGATTTTGTAGAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLEVQFA*DFVEQS
Trigger: ACTTTGCTCTACAAAATCTCATGCAAATTGGACCTC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTACTTTGACACTTTCCTaGTTGCCCTTTATAGCAGCC +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIITLTLS*LPFIAA
Trigger: GGCTGCTATAAAGGGCAATCAGGAAAGTGTCAAAGT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCATCTCCTTCTTCTTCTTaGATTGTATCCACACAAGTT +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSSPSSS*IVSTQV
Trigger: AACTTGTGTGGATACAATGCAAGAAGAAGAAGGAGA...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTAATTATGTAGACCTCTaGCCAGGCTTTAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIINYVDL*PGFKHS
Trigger: GCTGTGCTTAAAGCCTGGGCAGAGGTCTACATAATT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACTCTTGTCTATTTCCTaGAGTTTTTCCATGATACAG +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSLLSIS*SFSMIQ
Trigger: CTGTATCATGGAAAAACTGCAGGAAATAGACAAGAG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCATTCTCAATTCTGACATaGTTCTATCACTTCGGTTTG +
Preference number: 4 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSFSILT*FYHFGL
Trigger: CAAACCGAAGTGATAGAAGCATGTCAGAATTGAGAA...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTTTCAGCAGTAAGCTATaGGCTAATTCCATTCCTTGC +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIFSSKL*ANSIPC
Trigger: GCAAGGAATGGAATTAGCTCATAGCTTACTGCTGAA...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTATTGTCAAAGCTAACTTaGGCTAATCCAGCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLLSKLT*ANPAVK
Trigger: TTTTACTGCTGGATTAGCTCAAGTTAGCTTTGACAA...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTGATAACCAATGCAGCTaGAACCAATCTACTTCCATC +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIDNQCS*NQSTSI
Trigger: GATGGAAGTAGATTGGTTTCAGCTGCATTGGTTATC...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR GCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGGAGAGTTTTTCCACTaGCATAGATGTAAGCATATA +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLGEFFH*HRCKHI
Trigger: TATATGCTTACATCTATGGCAGTGGAAAAACTCTCC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR GCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTACTCTTGTCTATTTCCTaGAGTTTTTCCATGATACAG +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLLLSIS*SFSMIQ
Trigger: CTGTATCATGGAAAAACTGCAGGAAATAGACAAGAG...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CCA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGTCTCTTTGATATCATaGCATAATCTCTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLVSLIS*HNLSSV
Trigger: GACAGATGAGAGATTATGCCATGATATCAAAGAGAC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR TCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTAGTATTGAAGAAAGCTaGGTTAGCAAATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIISIEES*VSKSTA
Trigger: TGCTGTGGATTTGCTAACTCAGCTTTCTTCAATACT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTAACCACATCCCTTGCTaGTTTCAATTTGTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIINHIPC*FQFVKA
Trigger: AGCTTTGACAAATTGAAATCAGCAAGGGATGTGGTT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTAGAAGATCACCACAGTaGGAAACAAAGCTCTTGATA +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIRRSPQ*ETKLLI
Trigger: TATCAAGAGCTTTGTTTCCCACTGTGGTGATCTTCT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTATGCACATAATAGAGTaGGCCAGCAGAATCAATGAT +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIMHIIE*ASRIND
Trigger: ATCATTGATTCTGCTGGCCCACTCTATTATGTGCAT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR TCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTAAAACAGATGAATACTaGGGTCCAATTTGCATGAGA +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIKTDEY*GPICMR
Trigger: TCTCATGCAAATTGGACCTCAGTATTCATCTGTTTT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTGATGGTAGTTACTTCTaGACTGGTAGACAAAATAAA +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIDGSYF*TGRQNK
Trigger: TTTATTTTGTCTACCAGTCCAGAAGTAACTACCATC...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CCA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTAAAATCAGAGGAAACTaGTCTTTAATTGGATGCTTG +
Preference number: 4 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIKIRGN*SLIGCL
Trigger: CAAGCATCCAATTAAAGACCAGTTTCCTCTGATTTT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS GCA 90 bp AGTCCAGGAGGAAGAACGGACCACGCTGTTTATCAGCCGACCCTGTaGCCCAGTCAGCCCCTTCTCGGCGGACTCCAGCCCTTAGGGTCA +
Preference number: 5 (lower is better)
Translates to: SPGGRTDHAVYQPTL*PSQPLLGGLQPLGS
Trigger: TGACCCTAAGGGCTGGAGTCCGCCGAGAAGGGGCTGACTGGGGCACAGGGTCGGCTGATAAACAGCGTGGTCCGTTCTTCCTCCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549184.1
CDS-3UTR CAA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGGGACCTAAACATCCCTaGGAGCCAGCCACGTACTTC +
Preference number: 5 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLGPKHP*EPATYF
Trigger: GAAGTACGTGGCTGGCTCCAAGGGATGTTTAGGTCC...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGACAAACCAGCATATGTaGGCTAGCGGCTACATCTGT +
Preference number: 5 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLTNQHM*ASGYIC
Trigger: ACAGATGTAGCCGCTAGCCAACATATGCTGGTTTGT...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGGCTGACGAGCTCCTTTaGTGTGCTTTATACTGTCCA +
Preference number: 5 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLADELL*CALYCP
Trigger: TGGACAGTATAAAGCACACAAAAGGAGCTCGTCAGC...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGGTAGCCCATCGGGGATaGGTAAAAGGATGGGATTTT +
Preference number: 5 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLVAHRG*VKGWDF
Trigger: AAAATCCCATCCTTTTACCAATCCCCGATGGGCTAC...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGTGGTGCCAAGATaGTGTATGAGATTTCCAAGT +
Preference number: 5 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSAVVPR*CMRFPS
Trigger: ACTTGGAAATCTCATACACAATCTTGGCACCACAGC...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTTGCTCCTACATTGGCTaGATACTGTTCCAGAATCAC +
Preference number: 5 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSCSYIG*ILFQNH
Trigger: GTGATTCTGGAACAGTATCAAGCCAATGTAGGAGCA...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS TCA 90 bp CGAAGAATAAATGAAACACAACGGCGACAGCAGACGGCATCGATCTaGGTTTGGGTGGCTTTAGGGTGTGACGGTGACGCAAGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: RRINETQRRQQTASI*VWVALGCDGDARLR
Trigger: CCTAAGCCTTGCGTCACCGTCACACCCTAAAGCCACCCAAACTCAGATCGATGCCGTCTGCTGTCGCCGTTGTGTTTCATTTATTCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS TCA 90 bp CATCAGAGCAGAAATCAGCAACCATCCAGCTTGTGTGCGCTGAGCTaGAAGGCGACTGTTTTGAGCAGCAGAACACAGCAAATCCTCTGC +
Preference number: 5 (lower is better)
Translates to: HQSRNQQPSSLCALS*KATVLSSRTQQILC
Trigger: GCAGAGGATTTGCTGTGTTCTGCTGCTCAAAACAGTCGCCTTTCAGCTCAGCGCACACAAGCTGGATGGTTGCTGATTTCTGCTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
CDS CCA 90 bp GGAGAAGGTCAGTCCAAGCAGTACGGCTCTTTTCTGCCCGGGCCATaGGAGAAGATAATATTCCTTTTAGAGCCTGTAGGGAAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: GEGQSKQYGSFLPGP*EKIIFLLEPVGKLQ
Trigger: TTGCAGCTTCCCTACAGGCTCTAAAAGGAATATTATCTTCTCCCATGGCCCGGGCAGAAAAGAGCCGTACTGCTTGGACTGACCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTAAGCTCCTCCTAGTGTaGAAACAAATACCACATAAG +
Preference number: 5 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSKLLLV*KQIPHK
Trigger: CTTATGTGGTATTTGTTTCAACACTAGGAGGAGCTT...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS GCA 90 bp CTCTTGATAGCACACAGTGCACCAGCTCGTCCTTCCAGGGTCACCTaGCATGTAAACGAATCTCCTCGGCTCTTTTCTGTTTCTAGATCT +
Preference number: 5 (lower is better)
Translates to: LLIAHSAPARPSRVT*HVNESPRLFSVSRS
Trigger: AGATCTAGAAACAGAAAAGAGCCGAGGAGATTCGTTTACATGGCAGGTGACCCTGGAAGGACGAGCTGGTGCACTGTGTGCTATCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
ENST00000552500.1
CDS-3UTR CAA 90 bp TGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTGCTGCATTACATTTATCGATaGCTTCATGAACGGAGAATG +
Preference number: 5 (lower is better)
Translates to: WSQTPDFVIRPPWPSKVLHYIYR*LHERRM
Trigger: CATTCTCCGTTCATGAAGCAATCGATAAATGTAATG...CAGCACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp AGGCTGGTCTCAAACTCCCGACTTCGTGATCCGCCCGCCTTGGCCTTCCAAAGTTTCTCATTATGGAAGTaGCTGATCCCAGAGAATTTT +
Preference number: 5 (lower is better)
Translates to: RLVSNSRLRDPPALAFQSFSLWK*LIPENF
Trigger: AAAATTCTCTGGGATCAGCAACTTCCATAATGAGAA...ACTTTGGAAGGCCAAGGCGGGCGGATCACGAAGTCGGGAGTTTGAGACCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS CCA 90 bp GGAAGTTGGTGTTACAGGCCTGGAGAGATTAGATGCTCCTTCATCTaGGTCAGCAACAACAAAACCCGTGCTTGTAAGCCACAATGCTGT +
Preference number: 5 (lower is better)
Translates to: GSWCYRPGEIRCSFI*VSNNKTRACKPQCC
Trigger: ACAGCATTGTGGCTTACAAGCACGGGTTTTGTTGTTGCTGACCCAGATGAAGGAGCATCTAATCTCTCCAGGCCTGTAACACCAACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCCCTGACACATGGAAGTaGGTGTTACAGGCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIPDTWK*VLQAWR
Trigger: TCTCCAGGCCTGTAACACCAACTTCCATGTGTCAGG...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS TCA 90 bp TACCACATAAGCCTGAGTAACTCCAACTCGAACATCCCTACTGACTaGACTGGTTCCTTTCAGCATATCTCCACTGGCTCGAAGGAATCC +
Preference number: 5 (lower is better)
Translates to: YHISLSNSNSNIPTD*TGSFQHISTGSKES
Trigger: GGATTCCTTCGAGCCAGTGGAGATATGCTGAAAGGAACCAGTTCAGTCAGTAGGGATGTTCGAGTTGGAGTTACTCAGGCTTATGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCCATCATTCCTGCTGGTaGCCAACAAGAGCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIHHSCW*PTRASP
Trigger: TGGAGAAGCTCTTGTTGGCAACCAGCAGGAATGATG...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGAGAGATGGCCTGAGCTaGAACAAGGCAGTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: STRPLRALVSTMSLLSPKRDGLS*NKAVWV
Trigger: AACCCAGACTGCCTTGTTCAAGCTCAGGCCATCTCT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGTTCAAGGAGACACTTaGCAGCAGCACAACGAACAG +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIVQGDT*QQHNEQ
Trigger: CTGTTCGTTGTGCTGCTGCAAAGTGTCTCCTTGAAC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTATTCTTAGCAAGCAGTTaGCGGGTAGGAGGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLFLASS*RVGGPG
Trigger: CCCAGGGCCTCCTACCCGCAAACTGCTTGCTAAGAA...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCACAAACCAGCATATGTaGGCTAGCGGCTACATCTGT +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMITNQHM*ASGYIC
Trigger: ACAGATGTAGCCGCTAGCCAACATATGCTGGTTTGT...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAGGACCTAAACATCCCTaGGAGCCAGCCACGTACTTC +
Preference number: 5 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSGPKHP*EPATYF
Trigger: GAAGTACGTGGCTGGCTCCAAGGGATGTTTAGGTCC...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGTAGCCCATCGGGGATaGGTAAAAGGATGGGATTTT +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIVAHRG*VKGWDF
Trigger: AAAATCCCATCCTTTTACCAATCCCCGATGGGCTAC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS GCA 90 bp AAAGAGCAAAATCCTGAAGTGCAGCAAGCCAGAGTCTGCTTAGTGTaGCAAGATCTGCATAGACTAAGTCAAGCAGTCCATCTGATGAAC +
Preference number: 5 (lower is better)
Translates to: KEQNPEVQQARVCLV*QDLHRLSQAVHLMN
Trigger: GTTCATCAGATGGACTGCTTGACTTAGTCTATGCAGATCTTGGCACACTAAGCAGACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGCTGTGGTGCCAAGATaGTGTATGAGATTTCCAAGT +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIAVVPR*CMRFPS
Trigger: ACTTGGAAATCTCATACACAATCTTGGCACCACAGC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGCAAGGAGACCTGTACTaGAATCCTGTAGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: STRPLRALVSTMSLLSPKQGDLY*NPVAKV
Trigger: CACCTTTGCTACAGGATTCAAGTACAGGTCTCCTTG...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGTGGGAAACAAAGCTCTaGATAGCACACAGTGCACCA +
Preference number: 5 (lower is better)
Translates to: STRPLRALVSTMSLLSPKWETKL*IAHSAP
Trigger: TGGTGCACTGTGTGCTATCAAGAGCTTTGTTTCCCA...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGATCACTGCCAATTTTaGATCTGGGCCAAGGTACAT +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIDHCQF*IWAKVH
Trigger: ATGTACCTTGGCCCAGATCAAAAATTGGCAGTGATC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGGGAAATGCTCTGTTTaGACACAGTGCTTGATTCAC +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIGKCSV*TQCLIH
Trigger: GTGAATCAAGCACTGTGTCAAAACAGAGCATTTCCC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS TCA 90 bp TTGAATCCTGTAGCAAAGGTGCCGCTGTGGTGCCAAGATTGTGTATaGGATTTCCAAGTTCTTGTAAAGCACAAACCAGCATATGTTGGC +
Preference number: 5 (lower is better)
Translates to: LNPVAKVPLWCQDCV*DFQVLVKHKPAYVG
Trigger: GCCAACATATGCTGGTTTGTGCTTTACAAGAACTTGGAAATCTCATACACAATCTTGGCACCACAGCGGCACCTTTGCTACAGGATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
CDS GCA 90 bp GCAAAGTTAAAAGAGCAAAATCCTGAAGTGCAGCAAGCCAGAGTCTaGTTAGTGTGCCAAGATCTGCATAGACTAAGTCAAGCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: AKLKEQNPEVQQARV*LVCQDLHRLSQAVH
Trigger: ATGGACTGCTTGACTTAGTCTATGCAGATCTTGGCACACTAAGCAGACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTTTTAACTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCACAATATAAGAAGCCTTaGAGTTTCTCCCACATGAGC +
Preference number: 5 (lower is better)
Translates to: TRPLRALVSTMSLLSPKAQYKKP*SFSHMS
Trigger: GCTCATGTGGGAGAAACTCAAAGGCTTCTTATATTG...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAAGAGATGGCCTGAGCTaGAACAAGGCAGTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLRDGLS*NKAVWV
Trigger: AACCCAGACTGCCTTGTTCAAGCTCAGGCCATCTCT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCTTATGCTTTCCATGGTaGCATCTGAACGTAAGGAAC +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMILCFPW*HLNVRN
Trigger: GTTCCTTACGTTCAGATGCAACCATGGAAAGCATAA...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCTTCCTTCACATGTTCTaGAGCAGCACAGATAATCTG +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIFLHMF*SSTDNL
Trigger: CAGATTATCTGTGCTGCTCAAGAACATGTGAAGGAA...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCGACTTCATCAAGTTCTaGGTGTGTTTCATCAACTGG +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIDFIKF*VCFINW
Trigger: CCAGTTGATGAAACACACCAAGAACTTGATGAAGTC...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS CCA 90 bp TGTATGAGATTTCCAAGTTCTTGTAAAGCACAAACCAGCATATGTTaGCTAGCGGCTACATCTGTGGAACCAAGCCGGGTTTCCAAATTA +
Preference number: 5 (lower is better)
Translates to: CMRFPSSCKAQTSIC*LAATSVEPSRVSKL
Trigger: TAATTTGGAAACCCGGCTTGGTTCCACAGATGTAGCCGCTAGCCAACATATGCTGGTTTGTGCTTTACAAGAACTTGGAAATCTCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS CCA 90 bp ACAAACAAACAAACAACATTCAAAGTAGCTCAGGACAGCCTATCCTaGGTGATCAGAGAAAGCCTTGAGGAGATAATACCTGAGCTGACT +
Preference number: 5 (lower is better)
Translates to: TNKQTTFKVAQDSLS*VIRESLEEIIPELT
Trigger: AGTCAGCTCAGGTATTATCTCCTCAAGGCTTTCTCTGATCACCCAGGATAGGCTGTCCTGAGCTACTTTGAATGTTGTTTGTTTGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551414.1
CDS-3UTR CAA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGACAACCCCAAAGAGCTaGGATGCAGAACTAATAACT +
Preference number: 5 (lower is better)
Translates to: STRPLRALVSTMSLLSPKTTPKS*DAELIT
Trigger: AGTTATTAGTTCTGCATCCAAGCTCTTTGGGGTTGT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAACAGCGACCAAGGCTTaGGTGAACTTCAGCATGAGT +
Preference number: 5 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLTATKA*VNFSMS
Trigger: ACTCATGCTGAAGTTCACCAAAGCCTTGGTCGCTGT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGCAGTCTGGGTTATCTaGCATTACTGCACAACCCAG +
Preference number: 5 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLAVWVI*HYCTTQ
Trigger: CTGGGTTGTGCAGTAATGCAAGATAACCCAGACTGC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCCTCTCATCTGTCTCCTaGTCTAGTAAGATCAACAAT +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMILSSVS*SSKINN
Trigger: ATTGTTGATCTTACTAGACAAGGAGACAGATGAGAG...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCACTTCTTCTTCTTGCATaGTATCCACACAAGTTACAG +
Preference number: 5 (lower is better)
Translates to: TRPLRALVSTMSLLSPKALLLLA*YPHKLQ
Trigger: CTGTAACTTGTGTGGATACAATGCAAGAAGAAGAAG...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCATCTCCTTCTTCTTCTaGCATTGTATCCACACAAGT +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMIISFFF*HCIHTS
Trigger: ACTTGTGTGGATACAATGCAAGAAGAAGAAGGAGAT...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGTTCCTTCACATGTTCTaGAGCAGCACAGATAATCTG +
Preference number: 5 (lower is better)
Translates to: STRPLRALVSTMSLLSPKFLHMF*SSTDNL
Trigger: CAGATTATCTGTGCTGCTCAAGAACATGTGAAGGAA...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGCACACAATTCCAGTGTaGCAAAGACCAAAGACTTTC +
Preference number: 5 (lower is better)
Translates to: STRPLRALVSTMSLLSPKHTIPV*QRPKTF
Trigger: GAAAGTCTTTGGTCTTTGCAACACTGGAATTGTGTG...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAGACTTCATCAAGTTCTaGGTGTGTTTCATCAACTTC +
Preference number: 5 (lower is better)
Translates to: TRPLRALVSTMSLLSPKADFIKF*VCFINF
Trigger: GAAGTTGATGAAACACACCAAGAACTTGATGAAGTC...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538864.6
CDS-3UTR CAA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCACTGGTAGGTCTTGATTaGTACCACAGGATCTTTTAT +
Preference number: 5 (lower is better)
Translates to: TRPLRALVSTMSLLSPKALVGLD*YHRIFY
Trigger: ATAAAAGATCCTGTGGTACAAATCAAGACCTACCAG...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp CCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCCTGGTAGGTCTTGATTaGTACCACAGGATCTTTTAT +
Preference number: 5 (lower is better)
Translates to: PLRALVSTMSLLSPKAMILVGLD*YHRIFY
Trigger: ATAAAAGATCCTGTGGTACAAATCAAGACCTACCAG...GATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAAACAGTCAAGAATTGTaGTTAAGGCACTTCGGAGAA +
Preference number: 5 (lower is better)
Translates to: TRPLRALVSTMSLLSPKANSQEL*LRHFGE
Trigger: TTCTCCGAAGTGCCTTAACAACAATTCTTGACTGTT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp ACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAACACCAAATCTTATGTaGCACTGTAAGGCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: TRPLRALVSTMSLLSPKATPNLM*HCKAVS
Trigger: ACTTACAGCCTTACAGTGCAACATAAGATTTGGTGT...TGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS TCA 90 bp CAGTGTAAACACCAAGCTGCTGCTAGTCGAACAGAAATGCTAGGATaGAGAATAACTGACAAGATACTGTCAAGGAGACCTGTACTTGAA +
Preference number: 5 (lower is better)
Translates to: QCKHQAAASRTEMLG*RITDKILSRRPVLE
Trigger: TTCAAGTACAGGTCTCCTTGACAGTATCTTGTCAGTTATTCTTCATCCTAGCATTTCTGTTCGACTAGCAGCAGCTTGGTGTTTACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
CDS CCA 90 bp TTGCAGCAATCCTCCCAGCTGATCACAGTTCTTCTCGTTAAACTTTaGTCAATATACCTAACAATAAAAATCTTTGGGGGTCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: LQQSSQLITVLLVKL*SIYLTIKIFGGPPQ
Trigger: CTGAGGAGGACCCCCAAAGATTTTTATTGTTAGGTATATTGACCAAAGTTTAACGAGAAGAACTGTGATCAGCTGGGAGGATTGCTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382464.6
ENST00000543095.7
CDS-3UTR CAA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTACAAGGAGACCTGTACTaGAATCCTGTAGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLQGDLY*NPVAKV
Trigger: CACCTTTGCTACAGGATTCAAGTACAGGTCTCCTTG...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGCTGACGAGCTCCTTTaGTGTGCTTTATACTGTCCA +
Preference number: 5 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLADELL*CALYCP
Trigger: TGGACAGTATAAAGCACACAAAAGGAGCTCGTCAGC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGCTCTCATCTGTCTCCTaGTCTAGTAAGATCAACAAT +
Preference number: 5 (lower is better)
Translates to: STRPLRALVSTMSLLSPKLSSVS*SSKINN
Trigger: ATTGTTGATCTTACTAGACAAGGAGACAGATGAGAG...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCATGCTCCTACATTGGCTaGATACTGTTCCAGAATCAC +
Preference number: 5 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSCSYIG*ILFQNH
Trigger: GTGATTCTGGAACAGTATCAAGCCAATGTAGGAGCA...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGAGGAAACAGCTGGATTaGGATACTGAAAGATGGAAT +
Preference number: 5 (lower is better)
Translates to: STRPLRALVSTMSLLSPKRKQLD*DTERWN
Trigger: ATTCCATCTTTCAGTATCCAAATCCAGCTGTTTCCT...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAAATCTCATATCGGCCTaGAGACTCTGCACTCTTCAT +
Preference number: 5 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSNLISA*RLCTLH
Trigger: ATGAAGAGTGCAGAGTCTCAAGGCCGATATGAGATT...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCCAACAGTCAAGAATaGTTGTTAAGGCACTTCGGA +
Preference number: 5 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSPNSQE*LLRHFG
Trigger: TCCGAAGTGCCTTAACAACAATTCTTGACTGTTGGG...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTACAGCGACCAAGGCTTaGGTGAACTTCAGCATGAGT +
Preference number: 5 (lower is better)
Translates to: YCILDNPRPGFLNSSPIITATKA*VNFSMS
Trigger: ACTCATGCTGAAGTTCACCAAAGCCTTGGTCGCTGT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTGCAGTCTGGGTTATCTaGCATTACTGCACAACCCAG +
Preference number: 5 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIAVWVI*HYCTTQ
Trigger: CTGGGTTGTGCAGTAATGCAAGATAACCCAGACTGC...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp TCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGTTAGCATTCTCACATaGGTTAATTATCCTACAGAC +
Preference number: 5 (lower is better)
Translates to: STRPLRALVSTMSLLSPKVSILT*VNYPTD
Trigger: GTCTGTAGGATAATTAACCAATGTGAGAATGCTAAC...CTTTGGTGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGATCACTGCCAATTTTaGATCTGGGCCAAGGTACAT +
Preference number: 5 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLDHCQF*IWAKVH
Trigger: ATGTACCTTGGCCCAGATCAAAAATTGGCAGTGATC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS CCA 90 bp GCCTTACCACTTCAAGTGAAGCCAACTGAATGGAAGGTGATTCTCTaGTTAAAATTACTCGATGTAGAACATTCAGCAATTCTATACCCA +
Preference number: 5 (lower is better)
Translates to: ALPLQVKPTEWKVIL*LKLLDVEHSAILYP
Trigger: TGGGTATAGAATTGCTGAATGTTCTACATCGAGTAATTTTAACCAGAGAATCACCTTCCATTCAGTTGGCTTCACTTGAAGTGGTAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS CCA 90 bp TTGCAGCAATCCTCCCAGCTGATCACAGTTCTTCTCGTTAAACTTTaGTCAATATACCTAACAATAAAAATCTGTTGTGCACAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LQQSSQLITVLLVKL*SIYLTIKICCAQVK
Trigger: CTTCACCTGTGCACAACAGATTTTTATTGTTAGGTATATTGACCAAAGTTTAACGAGAAGAACTGTGATCAGCTGGGAGGATTGCTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549184.1
CDS-3UTR CAA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTTGGGAAACAAAGCTCTaGATAGCACACAGTGCACCA +
Preference number: 5 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIWETKL*IAHSAP
Trigger: TGGTGCACTGTGTGCTATCAAGAGCTTTGTTTCCCA...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS TCA 90 bp GGTAGTAACAGTTTGGTGTACACAACAGATACACACAATGAACGCTaGCTAAGAACCCTGGCAAAGGTACATTTTAAGATGTGCATTATA +
Preference number: 5 (lower is better)
Translates to: GSNSLVYTTDTHNER*LRTLAKVHFKMCII
Trigger: TATAATGCACATCTTAAAATGTACCTTTGCCAGGGTTCTTAGTCAGCGTTCATTGTGTGTATCTGTTGTGTACACCAAACTGTTACTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551414.1
CDS GCA 90 bp AAGGTACATCTAGAAGTGCTTGCAATGCATGTAAACAAGCAGTTATaGTTTCCATGGTTGCATCTGAACGTAAGGAACATAGAAATTCCA +
Preference number: 5 (lower is better)
Translates to: KVHLEVLAMHVNKQL*FPWLHLNVRNIEIP
Trigger: TGGAATTTCTATGTTCCTTACGTTCAGATGCAACCATGGAAAGCATAACTGCTTGTTTACATGCATTGCAAGCACTTCTAGATGTACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS CCA 90 bp CTCAAGAGTAGCTTTAAATTTATCAATACAGCGCTTCTGAAGGCATaGGATGGTAGTTACTTCTGGACTGGTAGACAAAATAAACACTGT +
Preference number: 5 (lower is better)
Translates to: LKSSFKFINTALLKA*DGSYFWTGRQNKHC
Trigger: ACAGTGTTTATTTTGTCTACCAGTCCAGAAGTAACTACCATCCCATGCCTTCAGAAGCGCTGTATTGATAAATTTAAAGCTACTCTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000551414.1
CDS-3UTR CAA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTACTTCTTCTTCTTGCATaGTATCCACACAAGTTACAG +
Preference number: 5 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLLLLLA*YPHKLQ
Trigger: CTGTAACTTGTGTGGATACAATGCAAGAAGAAGAAG...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCAGTGGTTTTTATGTCTTaGCACAGCAATTATGTAGAC +
Preference number: 5 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSVVFMS*HSNYVD
Trigger: GTCTACATAATTGCTGTGCAAAGACATAAAAACCAC...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAAGGAAACAGCTGGATTaGGATACTGAAAGATGGAAT +
Preference number: 5 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLRKQLD*DTERWN
Trigger: ATTCCATCTTTCAGTATCCAAATCCAGCTGTTTCCT...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp AAACAATCAACTAGACCTCTAAGGGCACTTGTGTCTACAATGTCCCTTTTGTCATTCTCATTATGGAAGTaGCTGATCCCAGAGAATTTT +
Preference number: 5 (lower is better)
Translates to: KQSTRPLRALVSTMSLLSFSLWK*LIPENF
Trigger: AAAATTCTCTGGGATCAGCAACTTCCATAATGAGAA...TGACAAAAGGGACATTGTAGACACAAGTGCCCTTAGAGGTCTAGTTGATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTACAACCCCAAAGAGCTaGGATGCAGAACTAATAACT +
Preference number: 5 (lower is better)
Translates to: YCILDNPRPGFLNSSPIITTPKS*DAELIT
Trigger: AGTTATTAGTTCTGCATCCAAGCTCTTTGGGGTTGT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS-3UTR CAA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGTTAGCATTCTCACATaGGTTAATTATCCTACAGAC +
Preference number: 5 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLVSILT*VNYPTD
Trigger: GTCTGTAGGATAATTAACCAATGTGAGAATGCTAAC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp GCACTTGTGTCTACAATGTCCCTTTTGTCACCAAAGGCAATGATCAAGTATTTAGTGGTTTTTATGTCTTaGCACAGCAATTATGTAGAC +
Preference number: 5 (lower is better)
Translates to: ALVSTMSLLSPKAMIKYLVVFMS*HSNYVD
Trigger: GTCTACATAATTGCTGTGCAAAGACATAAAAACCAC...TAAATACTTGATCATTGCCTTTGGTGACAAAAGGGACATTGTAGACACAAGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS-3UTR CAA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTTTATGCTTTCCATGGTaGCATCTGAACGTAAGGAAC +
Preference number: 5 (lower is better)
Translates to: YCILDNPRPGFLNSSPIILCFPW*HLNVRN
Trigger: GTTCCTTACGTTCAGATGCAACCATGGAAAGCATAA...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS TCA 90 bp TCTTTTATCTCAAGAGTAGCTTTAAATTTATCAATACAGCGCTTCTaGAGGCATGGGATGGTAGTTACTTCTGGACTGGTAGACAAAATA +
Preference number: 5 (lower is better)
Translates to: SFISRVALNLSIQRF*RHGMVVTSGLVDKI
Trigger: TATTTTGTCTACCAGTCCAGAAGTAACTACCATCCCATGCCTTCAGAAGCGCTGTATTGATAAATTTAAAGCTACTCTTGAGATAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000551414.1
CDS-3UTR CAA 90 bp TATTGTATACTGGATAATCCTAGACCAGGTTTCCTAAATAGCTCTCCAATCATTATTCTACCCAACTTCTaGTACAAGGAACCCAAACAT +
Preference number: 5 (lower is better)
Translates to: YCILDNPRPGFLNSSPIIILPNF*YKEPKH
Trigger: ATGTTTGGGTTCCTTGTACAAGAAGTTGGGTAGAAT...AATGATTGGAGAGCTATTTAGGAAACCTGGTCTAGGATTATCCAGTATACAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS TCA 90 bp TGCTCTATTAGAAACAGTTCATATTTACTGCTTTATATACCTGTGTaGAGCTGTCTTCAGTTTGGTAGTAACAGTTTGGTGTACACAACA +
Preference number: 5 (lower is better)
Translates to: CSIRNSSYLLLYIPV*SCLQFGSNSLVYTT
Trigger: TGTTGTGTACACCAAACTGTTACTACCAAACTGAAGACAGCTTCACACAGGTATATAAAGCAGTAAATATGAACTGTTTCTAATAGAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551414.1
CDS GCA 72 bp GGAAGAACGGACCACGCTGTTTATCAGCCGACCCTGTaGCCCAGTCAGCCCCTTCTCGGCGGACTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: GRTDHAVYQPTL*PSQPLLGGLQP
Trigger: GGGCTGGAGTCCGCCGAGAAGGGGCTGACTGGGGCACAGGGTCGGCTGATAAACAGCGTGGTCCGTTCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549184.1
CDS TCA 72 bp AATGAAACACAACGGCGACAGCAGACGGCATCGATCTaGGTTTGGGTGGCTTTAGGGTGTGACGGTGACGCA +
Preference number: 6 (lower is better)
Translates to: NETQRRQQTASI*VWVALGCDGDA
Trigger: TGCGTCACCGTCACACCCTAAAGCCACCCAAACTCAGATCGATGCCGTCTGCTGTCGCCGTTGTGTTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS GCA 72 bp GCACACAGTGCACCAGCTCGTCCTTCCAGGGTCACCTaGCATGTAAACGAATCTCCTCGGCTCTTTTCTGTT +
Preference number: 6 (lower is better)
Translates to: AHSAPARPSRVT*HVNESPRLFSV
Trigger: AACAGAAAAGAGCCGAGGAGATTCGTTTACATGGCAGGTGACCCTGGAAGGACGAGCTGGTGCACTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
ENST00000552500.1
CDS CCA 72 bp AGAGCCTGTAGGGAAGCTGCAACTGTCGAAGATAACTaGCCCCCAGGTAACTTCACAGCAGTCTCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: RACREAATVEDN*PPGNFTAVSLR
Trigger: CCTCAGAGAGACTGCTGTGAAGTTACCTGGGGGCCAGTTATCTTCGACAGTTGCAGCTTCCCTACAGGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS TCA 72 bp AGAAATCAGCAACCATCCAGCTTGTGTGCGCTGAGCTaGAAGGCGACTGTTTTGAGCAGCAGAACACAGCAA +
Preference number: 6 (lower is better)
Translates to: RNQQPSSLCALS*KATVLSSRTQQ
Trigger: TTGCTGTGTTCTGCTGCTCAAAACAGTCGCCTTTCAGCTCAGCGCACACAAGCTGGATGGTTGCTGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
CDS TCA 72 bp AGCCTGAGTAACTCCAACTCGAACATCCCTACTGACTaGACTGGTTCCTTTCAGCATATCTCCACTGGCTCG +
Preference number: 6 (lower is better)
Translates to: SLSNSNSNIPTD*TGSFQHISTGS
Trigger: CGAGCCAGTGGAGATATGCTGAAAGGAACCAGTTCAGTCAGTAGGGATGTTCGAGTTGGAGTTACTCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS CAA 90 bp GCTAATCTAGCCCATGACTCTGCAGCTGCACATCTCAGCAAGGGGTaGGGGCTTTCTAGGGCTCCCATAACTAATGTTAAGGCAAATCTT +
Preference number: 6 (lower is better)
Translates to: ANLAHDSAAAHLSKG*GLSRAPITNVKANL
Trigger: AAGATTTGCCTTAACATTAGTTATGGGAGCCCTAGAAAGCCCCAACCCCTTGCTGAGATGTGCAGCTGCAGAGTCATGGGCTAGATTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
CDS CCA 72 bp GCTAATCCAGCAGTAAAAGCTCCATCATCTACCACTTaGGCTAATCTAGCCCATGACTCTGCAGCTGCACAT +
Preference number: 6 (lower is better)
Translates to: ANPAVKAPSSTT*ANLAHDSAAAH
Trigger: ATGTGCAGCTGCAGAGTCATGGGCTAGATTAGCCCAAGTGGTAGATGATGGAGCTTTTACTGCTGGATTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
CDS CAA 90 bp GTTCTTGGTGTGTTTCATCAACTGGATCCCAACAGTCAAGAATTGTaGTTAAGGCACTTCGGAGAAGGTCAGTCCAAGCAGTACGGCTCT +
Preference number: 6 (lower is better)
Translates to: VLGVFHQLDPNSQEL*LRHFGEGQSKQYGS
Trigger: AGAGCCGTACTGCTTGGACTGACCTTCTCCGAAGTGCCTTAACAACAATTCTTGACTGTTGGGATCCAGTTGATGAAACACACCAAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS TCA 72 bp AAGACACACTTCCACAACAGCAGAACTCGAGCAAGGTaGTGGCTAACAACTGCAGGACCTAATGTCATCAGA +
Preference number: 6 (lower is better)
Translates to: KTHFHNSRTRAR*WLTTAGPNVIR
Trigger: TCTGATGACATTAGGTCCTGCAGTTGTTAGCCATCACCTTGCTCGAGTTCTGCTGTTGTGGAAGTGTGTCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
CDS TCA 72 bp AAATCCACAGCACAAGGAAGTGGTGGAAGAAGACGCTaGGTTACTTCCTCAGTAAGAAGATCACCACAGTGG +
Preference number: 6 (lower is better)
Translates to: KSTAQGSGGRRR*VTSSVRRSPQW
Trigger: CCACTGTGGTGATCTTCTTACTGAGGAAGTAACTCAGCGTCTTCTTCCACCACTTCCTTGTGCTGTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
ENST00000552500.1
CDS TCA 72 bp TCCAGGTCCGTACTCCACATAAAGATGGCTTCATTCTaGAGTTCAAGGAGACACTTTGCAGCAGCACAACGA +
Preference number: 6 (lower is better)
Translates to: SRSVLHIKMASF*SSRRHFAAAQR
Trigger: TCGTTGTGCTGCTGCAAAGTGTCTCCTTGAACTTCAGAATGAAGCCATCTTTATGTGGAGTACGGACCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS CCA 72 bp TTTCCAAGTTCTTGTAAAGCACAAACCAGCATATGTTaGCTAGCGGCTACATCTGTGGAACCAAGCCGGGTT +
Preference number: 6 (lower is better)
Translates to: FPSSCKAQTSIC*LAATSVEPSRV
Trigger: AACCCGGCTTGGTTCCACAGATGTAGCCGCTAGCCAACATATGCTGGTTTGTGCTTTACAAGAACTTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS CAA 90 bp CCCACTGTATCAGTAAAGGTGTTACCCAGTATTCTACCCAACTTCTaGTACAAGGAACCCAAACATACCACAGCAGCAAGCTTAGTGGGA +
Preference number: 6 (lower is better)
Translates to: PTVSVKVLPSILPNF*YKEPKHTTAASLVG
Trigger: TCCCACTAAGCTTGCTGCTGTGGTATGTTTGGGTTCCTTGTACAAGAAGTTGGGTAGAATACTGGGTAACACCTTTACTGATACAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS TCA 72 bp GTAGCAAAGGTGCCGCTGTGGTGCCAAGATTGTGTATaGGATTTCCAAGTTCTTGTAAAGCACAAACCAGCA +
Preference number: 6 (lower is better)
Translates to: VAKVPLWCQDCV*DFQVLVKHKPA
Trigger: TGCTGGTTTGTGCTTTACAAGAACTTGGAAATCTCATACACAATCTTGGCACCACAGCGGCACCTTTGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
CDS CAA 72 bp GTGTTTCATCAACTGGATCCCAACAGTCAAGAATTGTaGTTAAGGCACTTCGGAGAAGGTCAGTCCAAGCAG +
Preference number: 6 (lower is better)
Translates to: VFHQLDPNSQEL*LRHFGEGQSKQ
Trigger: CTGCTTGGACTGACCTTCTCCGAAGTGCCTTAACAACAATTCTTGACTGTTGGGATCCAGTTGATGAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS CAA 72 bp GGTGTGTTTCATCAACTGGATCCCAACAGTCAAGAATaGTTGTTAAGGCACTTCGGAGAAGGTCAGTCCAAG +
Preference number: 6 (lower is better)
Translates to: GVFHQLDPNSQE*LLRHFGEGQSK
Trigger: CTTGGACTGACCTTCTCCGAAGTGCCTTAACAACAATTCTTGACTGTTGGGATCCAGTTGATGAAACACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS CAA 90 bp CCTGTACTTGAATCCTGTAGCAAAGGTGCCGCTGTGGTGCCAAGATaGTGTATGAGATTTCCAAGTTCTTGTAAAGCACAAACCAGCATA +
Preference number: 6 (lower is better)
Translates to: PVLESCSKGAAVVPR*CMRFPSSCKAQTSI
Trigger: TATGCTGGTTTGTGCTTTACAAGAACTTGGAAATCTCATACACAATCTTGGCACCACAGCGGCACCTTTGCTACAGGATTCAAGTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
CDS TCA 72 bp TCCAGAACTTCCTCCAAAGATACTCTGCGAATGCTTTaGCGTGAGGCTGCTGTTCCTGGATGTTTAGAAATT +
Preference number: 6 (lower is better)
Translates to: SRTSSKDTLRML*REAAVPGCLEI
Trigger: AATTTCTAAACATCCAGGAACAGCAGCCTCACGTCAAAGCATTCGCAGAGTATCTTTGGAGGAAGTTCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS GCA 72 bp AAAGAGCAAAATCCTGAAGTGCAGCAAGCCAGAGTCTaGTTAGTGTGCCAAGATCTGCATAGACTAAGTCAA +
Preference number: 6 (lower is better)
Translates to: KEQNPEVQQARV*LVCQDLHRLSQ
Trigger: TTGACTTAGTCTATGCAGATCTTGGCACACTAAGCAGACTCTGGCTTGCTGCACTTCAGGATTTTGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS CCA 72 bp CTATACCCAAGTCCTGATCACTGCCAATTTTTGATCTaGGCCAAGGTACATCTAGAAGTGCTTGCAATGCAT +
Preference number: 6 (lower is better)
Translates to: LYPSPDHCQFLI*AKVHLEVLAMH
Trigger: ATGCATTGCAAGCACTTCTAGATGTACCTTGGCCCAGATCAAAAATTGGCAGTGATCAGGACTTGGGTATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS CCA 72 bp ACAGCGCTTCTGAAGGCATGGGATGGTAGTTACTTCTaGACTGGTAGACAAAATAAACACTGTGATAGCAGT +
Preference number: 6 (lower is better)
Translates to: TALLKAWDGSYF*TGRQNKHCDSS
Trigger: ACTGCTATCACAGTGTTTATTTTGTCTACCAGTCCAGAAGTAACTACCATCCCATGCCTTCAGAAGCGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000551414.1
CDS CCA 72 bp CAAACAACATTCAAAGTAGCTCAGGACAGCCTATCCTaGGTGATCAGAGAAAGCCTTGAGGAGATAATACCT +
Preference number: 6 (lower is better)
Translates to: QTTFKVAQDSLS*VIRESLEEIIP
Trigger: AGGTATTATCTCCTCAAGGCTTTCTCTGATCACCCAGGATAGGCTGTCCTGAGCTACTTTGAATGTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551414.1
CDS CAA 72 bp GAATCCTGTAGCAAAGGTGCCGCTGTGGTGCCAAGATaGTGTATGAGATTTCCAAGTTCTTGTAAAGCACAA +
Preference number: 6 (lower is better)
Translates to: ESCSKGAAVVPR*CMRFPSSCKAQ
Trigger: TTGTGCTTTACAAGAACTTGGAAATCTCATACACAATCTTGGCACCACAGCGGCACCTTTGCTACAGGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
CDS CAA 72 bp TCAGTAAAGGTGTTACCCAGTATTCTACCCAACTTCTaGTACAAGGAACCCAAACATACCACAGCAGCAAGC +
Preference number: 6 (lower is better)
Translates to: SVKVLPSILPNF*YKEPKHTTAAS
Trigger: GCTTGCTGCTGTGGTATGTTTGGGTTCCTTGTACAAGAAGTTGGGTAGAATACTGGGTAACACCTTTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS CCA 72 bp GTGATAGCAGTAAGTAGACTGACTTCATCAAGTTCTTaGTGTGTTTCATCAACTGGATCCCAACAGTCAAGA +
Preference number: 6 (lower is better)
Translates to: VIAVSRLTSSSS*CVSSTGSQQSR
Trigger: TCTTGACTGTTGGGATCCAGTTGATGAAACACACCAAGAACTTGATGAAGTCAGTCTACTTACTGCTATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543095.7
CDS CAA 72 bp CAACATGTAACTGAACCACTTGCTGACGAGCTCCTTTaGTGTGCTTTATACTGTCCAAAAGCTGTTCCAATA +
Preference number: 6 (lower is better)
Translates to: QHVTEPLADELL*CALYCPKAVPI
Trigger: TATTGGAACAGCTTTTGGACAGTATAAAGCACACAAAAGGAGCTCGTCAGCAAGTGGTTCAGTTACATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000550366.5
CDS CAA 90 bp TTTAAAGTCTCTTTGATATCATGGCATAATCTCTCATCTGTCTCCTaGTCTAGTAAGATCAACAATGCCCCCTCAAGGCCAACTTCTCTG +
Preference number: 6 (lower is better)
Translates to: FKVSLISWHNLSSVS*SSKINNAPSRPTSL
Trigger: CAGAGAAGTTGGCCTTGAGGGGGCATTGTTGATCTTACTAGACAAGGAGACAGATGAGAGATTATGCCATGATATCAAAGAGACTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000549719.1
ENST00000550366.5
ENST00000550819.1
CDS TCA 72 bp CAGATAATCTGCCTTACCACTTCAAGTGAAGCCAACTaGATGGAAGGTGATTCTCTGGTTAAAATTACTCGA +
Preference number: 6 (lower is better)
Translates to: QIICLTTSSEAN*MEGDSLVKITR
Trigger: TCGAGTAATTTTAACCAGAGAATCACCTTCCATTCAGTTGGCTTCACTTGAAGTGGTAAGGCAGATTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7
CDS TCA 72 bp TCAAGAGTAGCTTTAAATTTATCAATACAGCGCTTCTaGAGGCATGGGATGGTAGTTACTTCTGGACTGGTA +
Preference number: 6 (lower is better)
Translates to: SRVALNLSIQRF*RHGMVVTSGLV
Trigger: TACCAGTCCAGAAGTAACTACCATCCCATGCCTTCAGAAGCGCTGTATTGATAAATTTAAAGCTACTCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538864.6
ENST00000543095.7
ENST00000551414.1
CDS TCA 72 bp AGTTTGGTGTACACAACAGATACACACAATGAACGCTaGCTAAGAACCCTGGCAAAGGTACATTTTAAGATG +
Preference number: 6 (lower is better)
Translates to: SLVYTTDTHNER*LRTLAKVHFKM
Trigger: CATCTTAAAATGTACCTTTGCCAGGGTTCTTAGTCAGCGTTCATTGTGTGTATCTGTTGTGTACACCAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551414.1
CDS GCA 72 bp GTCACATTCATTCAACAAGACTTAAGAAACACTGTGTaGCAGCCCTCTTTTAGGCACAGAGAATACATCTTA +
Preference number: 6 (lower is better)
Translates to: VTFIQQDLRNTV*QPSFRHREYIL
Trigger: TAAGATGTATTCTCTGTGCCTAAAAGAGGGCTGGCACACAGTGTTTCTTAAGTCTTGTTGAATGAATGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551414.1
CDS CCA 72 bp TTTCCAAGTTCTTGTAAAGCACAAACCAGCATATGTTaGCTAGCGGCTACATCCATAACTTTCTTTAGCTTC +
Preference number: 6 (lower is better)
Translates to: FPSSCKAQTSIC*LAATSITFFSF
Trigger: GAAGCTAAAGAAAGTTATGGATGTAGCCGCTAGCCAACATATGCTGGTTTGTGCTTTACAAGAACTTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550366.5
CDS CCA 72 bp CTTCAAGTGAAGCCAACTGAATGGAAGGTGATTCTCTaGTTAAAATTACTCGATGTAGAACATTCAGCAATT +
Preference number: 6 (lower is better)
Translates to: LQVKPTEWKVIL*LKLLDVEHSAI
Trigger: AATTGCTGAATGTTCTACATCGAGTAATTTTAACCAGAGAATCACCTTCCATTCAGTTGGCTTCACTTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538864.6
ENST00000543095.7