Pregenerated sensors for HDHD3 (Homo sapiens)
Ensembl gene IDs: ENSG00000119431Ensembl transcript IDs: ENST00000238379.9, ENST00000374180.3, ENST00000374180.4, ENST00000485934.1
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAGGGTGAGAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTaGCAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCTGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: GRVRAQHSLLYYHSR*QRPQGEGERSRAVE Trigger: CTCCACAGCTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTCTCACCCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.3 |
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| 3UTR-3UTR CCA 90 bp | ATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCTGTGGTTAAGGTTTTCTCCATaGCCTAGGGCCCAGCCACTT | + |
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Preference number: 2 (lower is better) Translates to: ITVGDKGRRERGKGPELWLRFSP*PRAQPL Trigger: AAGTGGCTGGGCCCTAGGCCATGGAGAAAACCTTAA...CCACAGCTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.3 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGTTAAGGTTTTCTCCATaGCCTAGGGCCCAGCCACTT | + |
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Preference number: 2 (lower is better) Translates to: ELSTHCFIITVGDKGRRELRFSP*PRAQPL Trigger: AAGTGGCTGGGCCCTAGGCCATGGAGAAAACCTTAA...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.3 |
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| 3UTR TCA 72 bp | AGAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTaGCAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: RAQHSLLYYHSR*QRPQGEGERSR Trigger: TCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.3 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGCCCTGTCTCCAGGGTTaGTTTAAGGTTTTCTCCATG | + |
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Preference number: 3 (lower is better) Translates to: LSTHCFIITVGDKGRRERPCLQG*FKVFSM Trigger: CATGGAGAAAACCTTAAACAAACCCTGGAGACAGGG...CCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.3 |
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| 3UTR-3UTR CAA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGCCCTGTCTCCAGGGTTaGTTTAAGGTTTTCTCCATG | + |
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Preference number: 3 (lower is better) Translates to: ELSTHCFIITVGDKGRREPCLQG*FKVFSM Trigger: CATGGAGAAAACCTTAAACAAACCCTGGAGACAGGG...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.3 |
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| CDS-3UTR CCA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGTGCGGGGGTCCGGCTTaGGCCAGCCAGCAGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: STHCFIITVGDKGRRERGCGGPA*ASQQPR Trigger: CCGAGGCTGCTGGCTGGCCCAAGCCGGACCCCCGCA...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | ATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCTGTGGACATCCAGCCACCACTaGCGGGAGGTTAGGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: ITVGDKGRRERGKGPELWTSSHH*REVRPW Trigger: CCACGGCCTAACCTCCCGCCAGTGGTGGCTGGATGT...CCACAGCTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR TCA 90 bp | ATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCTGTGGCCCTGTATGCCTGCCTaGAGCCTTGTTCCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ITVGDKGRRERGKGPELWPCMPA*SLVPGL Trigger: CAGCCCTGGAACAAGGCTTCAGGCAGGCATACAGGG...CCACAGCTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR TCA 90 bp | TTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGGCCTTGTTCCAGGGCTaGGGGCTCCACCTCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: FIITVGDKGRRERGKGPEALFQG*GLHLQP Trigger: GGGCTGGAGGTGGAGCCCTCAGCCCTGGAACAAGGC...CTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR GCA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGCCAGGAAGCTGTGCATaGCCACAGCCCGAGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: STHCFIITVGDKGRRERGPGSCA*PQPEAP Trigger: AGGGGCCTCGGGCTGTGGGCATGCACAGCTTCCTGG...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGGCAGCCGGTGTGCCATaGAGGAGGCCAAGTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: STHCFIITVGDKGRRERGAAGVP*RRPSPP Trigger: GGGTGGACTTGGCCTCCTCCATGGCACACCGGCTGC...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | CTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGCCTCCCCTAAGGGGTaGCGGAGCCTGAGCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: LSTHCFIITVGDKGRRERASPKG*RSLSSV Trigger: CACGCTGCTCAGGCTCCGCCACCCCTTAGGGGAGGC...CCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | CTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGCCCGGGCCTTGGTaGCATAGGCCTCCCCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: LSTHCFIITVGDKGRRERGPGPW*HRPPLR Trigger: CCTTAGGGGAGGCCTATGCCACCAAGGCCCGGGCCC...CCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGCATGGGCCCGGGCCTTaGTGGCATAGGCCTCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: STHCFIITVGDKGRRERGHGPGP*WHRPPL Trigger: TAGGGGAGGCCTATGCCACCAAGGCCCGGGCCCATG...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | TTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGTCCACCTCCAGCCCATaGGCCCGGGCCTTGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: FIITVGDKGRRERGKGPESTSSP*ARALVA Trigger: TGCCACCAAGGCCCGGGCCCATGGGCTGGAGGTGGA...CTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR TCA 90 bp | CTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGATGGGGGCTACAGCCTaGGCATCCTGGACACCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LSTHCFIITVGDKGRRERMGATA*ASWTPA Trigger: GGCGGGTGTCCAGGATGCTCAGGCTGTAGCCCCCAT...CCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR GCA 90 bp | CTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGCCCCATCCAACACCTaGCAGGTGCAGGGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSTHCFIITVGDKGRRERAPSNT*QVQGWL Trigger: CAGCCACCCCTGCACCTGGCAGGTGTTGGATGGGGC...CCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR GCA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGGTCTCAGACCCCGTGTaGGGCACTCCCTCAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: STHCFIITVGDKGRRERGVSDPV*GTPSGC Trigger: ACACCCTGAGGGAGTGCCGCACACGGGGTCTGAGAC...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR GCA 90 bp | CTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGACCACGGGGTCCAGTaGCTGTGGGCCAACCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LSTHCFIITVGDKGRRERDHGVQ*LWANHQ Trigger: CTGGTGGTTGGCCCACAGGCACTGGACCCCGTGGTC...CCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGCCTCAGGTCCCACGGTaGGTCCCAGGGGAAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRREPQVPR*VPGEAE Trigger: CTCAGCTTCCCCTGGGACCCACCGTGGGACCTGAGG...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGCCGCAAGGCCTCCTaGAAAATGCGGGGGTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRRESRKAS*KMRGSG Trigger: GCCGGACCCCCGCATTTTCCAGGAGGCCTTGCGGCT...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR TCA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGACAAGGCCGTCCCCTTaGAACCTGAGGGGCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: STHCFIITVGDKGRRERGTRPSP*NLRGQS Trigger: ACTCTGGCCCCTCAGGTTTCAAGGGGACGGCCTTGT...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR TCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGTGGCGGAGCCTaGGCAGCGTGTCCTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRRERGGGA*AACPSH Trigger: ATGTGAAGGACACGCTGCTCAGGCTCCGCCACCCCT...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR TCA 90 bp | TTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGGGGAAGCTGTGGCTCTaGGCCCTGTATGCCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: FIITVGDKGRRERGKGPEGKLWL*ALYACL Trigger: CAGGCAGGCATACAGGGCTCAGAGCCACAGCTTCCC...CTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR GCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGTCCACCCCAGTTCTaGCTCAGGTCCCACGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRRESPPQF*LRSHGG Trigger: CCCACCGTGGGACCTGAGGCAGAACTGGGGTGGACT...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR GCA 90 bp | CTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGACCACCAGGAAGCTGTaGATGCCCACAGCCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LSTHCFIITVGDKGRRERTTRKL*MPTARG Trigger: GCCTCGGGCTGTGGGCATGCACAGCTTCCTGGTGGT...CCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGGGGGTCCAGTGCCTGTaGGCCAACCACCAGGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRREGVQCL*ANHQEA Trigger: AGCTTCCTGGTGGTTGGCCCACAGGCACTGGACCCC...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | ATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCTGTGGAAAGGTCCAGAGCTGTaGAGAAAGAAGGGGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: ITVGDKGRRERGKGPELWKGPEL*RKKGLP Trigger: AGGGAGCCCCTTCTTTCTCCACAGCTCTGGACCTTT...CCACAGCTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR TCA 90 bp | CTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGTTCCCCAGACAGAGCTaGTCCCAGACAAGGCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: LSTHCFIITVGDKGRRERFPRQS*SQTRPS Trigger: GGACGGCCTTGTCTGGGATCAGCTCTGTCTGGGGAA...CCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGCAGGCTGAAGTGCAATaGCGCGATCTCGGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: STHCFIITVGDKGRRERGQAEVQ*RDLGSL Trigger: CAGTGAGCCGAGATCGCGCCATTGCACTTCAGCCTG...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | TTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGTGGACACCCGCCAGGTaGAAGGTCTGCAGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: FIITVGDKGRRERGKGPEWTPAR*KVCRTT Trigger: TGTGGTCCTGCAGACCTTCCACCTGGCGGGTGTCCA...CTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR TCA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGCGTCCCCTTGAAACCTaGGGGGCCAGAGTTCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: STHCFIITVGDKGRRERGRPLET*GARVQS Trigger: ACTTTGAACTCTGGCCCCTCAGGTTTCAAGGGGACG...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR TCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGATCCCAAGGTCACAGTaGGTCAGTGGCACAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRREIPRSQ*VSGTAR Trigger: CCTGGCTGTGCCACTGACTCACTGTGACCTTGGGAT...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR TCA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGACTACTGGTTCCATATaGGCAAGCCGCAAGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: STHCFIITVGDKGRRERGTTGSI*ASRKAS Trigger: GGAGGCCTTGCGGCTTGCTCATATGGAACCAGTAGT...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR TCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGTTAGTGGGGGAAGGGTaGGAGCTCAGCACTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRRELVGEG*ELSTHC Trigger: GCAGTGAGTGCTGAGCTCTCACCCTTCCCCCACTAA...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR GCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGTATCTGCAGCCGGTGTaGCATGGAGGAGGCCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRREYLQPV*HGGGQV Trigger: GACTTGGCCTCCTCCATGGCACACCGGCTGCAGATA...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR GCA 90 bp | TTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGGTCAGCAGTCGTATCTaGAGCCGGTGTGCCATGGAG | + |
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Preference number: 4 (lower is better) Translates to: FIITVGDKGRRERGKGPEVSSRI*SRCAME Trigger: CTCCATGGCACACCGGCTGCAGATACGACTGCTGAC...CTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGCTGCTATCCAGAGGCTaGTGCAGCTTCTTTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: STHCFIITVGDKGRRERGLLSRG*CSFFPQ Trigger: CTGGGGAAAGAAGCTGCACCAGCCTCTGGATAGCAG...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | ATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCTGTGGAACTTCCAGACTCTCTaGCCAGTTCTTCCACTGTAC | + |
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Preference number: 4 (lower is better) Translates to: ITVGDKGRRERGKGPELWNFQTL*PVLPLY Trigger: GTACAGTGGAAGAACTGGCCAGAGAGTCTGGAAGTT...CCACAGCTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGCAGGGGAAGCTGAGCTaGATAAGACCACCTCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRREQGKLS*IRPPLR Trigger: GCGCAGAGGTGGTCTTATCCAGCTCAGCTTCCCCTG...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR GCA 90 bp | ATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCTGTGGAAGATCCTCTCATTTTaGAGGTGGGTAGACAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: ITVGDKGRRERGKGPELWKILSF*RWVDRD Trigger: GTCTCTGTCTACCCACCTGCAAAATGAGAGGATCTT...CCACAGCTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR GCA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGCTATCCAGAGGCTGGTaGAGCTTCTTTCCCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: STHCFIITVGDKGRRERGLSRGW*SFFPQT Trigger: TGTCTGGGGAAAGAAGCTGCACCAGCCTCTGGATAG...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR GCA 90 bp | TTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGGCTCTGAGCCCTGTATaGCTGCCTGAAGCCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: FIITVGDKGRRERGKGPEALSPV*LPEALF Trigger: GAACAAGGCTTCAGGCAGGCATACAGGGCTCAGAGC...CTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR CCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGCCACTTCCCTCACTaGCCTCAAAGCCCTGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRRESHFPH*PQSPGV Trigger: AACTCCAGGGCTTTGAGGCCAGTGAGGGAAGTGGCT...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR TCA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGGGCACAAGAAACAAGTaGCTCAGCCTGCTATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: STHCFIITVGDKGRRERGGTRNK*LSLLSR Trigger: TCTGGATAGCAGGCTGAGTCACTTGTTTCTTGTGCC...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS-3UTR GCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGACAAGTGACTCAGCCTaGTATCCAGAGGCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRRETSDSA*YPEAGA Trigger: TGCACCAGCCTCTGGATAGCAGGCTGAGTCACTTGT...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGGCCGTCGGTCAAAGTTaGAGATCACTGCCAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FIITVGDKGRRERGKGPEAVGQS*RSLPVS Trigger: TGAGACTGGCAGTGATCTCCAACTTTGACCGACGGC...CTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGATGGGCTGCCACTACTaGTTCCATATGAGCAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSTHCFIITVGDKGRRERMGCHY*FHMSKP Trigger: CGGCTTGCTCATATGGAACCAGTAGTGGCAGCCCAT...CCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR TCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGTATTATCACAGTAGGTaGCAAAGGCCGCAGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRREYYHSR*QRPQGE Trigger: CTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATA...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR GCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGATCCCCAACATGGGCTaGCACTACTGGTTCCATATG | + |
|
Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRREIPNMG*HYWFHM Trigger: CATATGGAACCAGTAGTGGCAGCCCATGTTGGGGAT...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCTCTCATTTTGCAGGTaGGTAGACAGAGACCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FIITVGDKGRRERGKGPELSFCR*VDRDPV Trigger: CACTGGGTCTCTGTCTACCCACCTGCAAAATGAGAG...CTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAATCTGGGGGAGCCTTaGAGGAAGTTTGTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRRENLGEP*RKFVQE Trigger: TTCCTGGACAAACTTCCTCCAAGGCTCCCCCAGATT...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGTTAAGGTTTTCTCCATaGCCTAGGGCCCAGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: FIITVGDKGRRERGKGPELRFSP*PRAQPL Trigger: AAGTGGCTGGGCCCTAGGCCATGGAGAAAACCTTAA...CTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR TCA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAAAGTACGGCTAAGTTaGTACTTAGGGAAGGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELSTHCFIITVGDKGRREKVRLS*YLGKGV Trigger: GACGCCCTTCCCTAAGTATCAACTTAGCCGTACTTT...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR TCA 90 bp | CTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGAGGTGCAGGGGTGGCTaGAGTCTTTATAAAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSTHCFIITVGDKGRRERRCRGG*SLYKAV Trigger: AACAGCTTTATAAAGACTTCAGCCACCCCTGCACCT...CCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGGAGCTCAGCACTCACTaGTTTATTATCACAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FIITVGDKGRRERGKGPEELSTH*FIITVG Trigger: ACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC...CTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS TCA 90 bp | AGGGCGTCCACGGCTCCGGGCCGGTTCCTGGGCCCAGGACCCACCTaGCTCACAAGGAAGCAGATTGAAAACGCAGCCGCAAGGCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RASTAPGRFLGPGPT*LTRKQIENAAARPA Trigger: CGCGGGCCTTGCGGCTGCGTTTTCAATCTGCTTCCTTGTGAGTCAGGTGGGTCCTGGGCCCAGGAACCGGCCCGGAGCCGTGGACGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374180.4 |
||
| CDS TCA 90 bp | CCCACCTCCAGGGCTCGGGAAAGGCGAAGTCCAGGAGCCCGGACCTaGCGCAGAATGTCTATAGCTGCCGTCGGCAGCGTGAGCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PTSRARERRSPGART*RRMSIAAVGSVSWG Trigger: GCCCCAGCTCACGCTGCCGACGGCAGCTATAGACATTCTGCGTCAGGTCCGGGCTCCTGGACTTCGCCTTTCCCGAGCCCTGGAGGTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374180.4 ENST00000485934.1 |
||
| CDS TCA 90 bp | GTGGCTCTGAGCCCTGTATGCCTGCCTGAAGCCTTGTTCCAGGGCTaGGGGCTCCACCTCCAGCCCATGGGCCCGGGCCTTGGTGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: VALSPVCLPEALFQG*GLHLQPMGPGLGGI Trigger: TATGCCACCAAGGCCCGGGCCCATGGGCTGGAGGTGGAGCCCTCAGCCCTGGAACAAGGCTTCAGGCAGGCATACAGGGCTCAGAGCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
||
| CDS-3UTR CAA 90 bp | ATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCTGTGGATGCGGGGGTCCGGCTaGGGCCAGCCAGCAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ITVGDKGRRERGKGPELWMRGSG*GQPAAS Trigger: CGAGGCTGCTGGCTGGCCCAAGCCGGACCCCCGCAT...CCACAGCTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS TCA 90 bp | CCCGGGCCTTGGTGGCATAGGCCTCCCCTAAGGGGTGGCGGAGCCTaGGCAGCGTGTCCTTCACATCCCACGTCAGCAGTCGTATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGPWWHRPPLRGGGA*AACPSHPTSAVVSA Trigger: TGCAGATACGACTGCTGACGTGGGATGTGAAGGACACGCTGCTCAGGCTCCGCCACCCCTTAGGGGAGGCCTATGCCACCAAGGCCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
||
| CDS GCA 90 bp | TCTGCAGCCGGTGTGCCATGGAGGAGGCCAAGTCCACCCCAGTTCTaGCTCAGGTCCCACGGTGGGTCCCAGGGGAAGCTGAGCTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: SAAGVPWRRPSPPQF*LRSHGGSQGKLSWI Trigger: TATCCAGCTCAGCTTCCCCTGGGACCCACCGTGGGACCTGAGGCAGAACTGGGGTGGACTTGGCCTCCTCCATGGCACACCGGCTGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
||
| CDS GCA 90 bp | GCCGTCGGTCAAAGTTGGAGATCACTGCCAGTCTCAGACCCCGTGTaGGGCACTCCCTCAGGGTGTCCTCAGCCCCATCCAACACCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVGQSWRSLPVSDPV*GTPSGCPQPHPTPA Trigger: GGCAGGTGTTGGATGGGGCTGAGGACACCCTGAGGGAGTGCCGCACACGGGGTCTGAGACTGGCAGTGATCTCCAACTTTGACCGACGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
||
| CDS GCA 90 bp | CCACGGGGTCCAGTGCCTGTGGGCCAACCACCAGGAAGCTGTGCATaGCCACAGCCCGAGGCCCCTGGTAATCGCAGAGGTAATTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: PRGPVPVGQPPGSCA*PQPEAPGNRRGNYP Trigger: GGGATAATTACCTCTGCGATTACCAGGGGCCTCGGGCTGTGGGCATGCACAGCTTCCTGGTGGTTGGCCCACAGGCACTGGACCCCGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
||
| CDS CCA 90 bp | GTCCCCTTCTCAGCTGTAGGGCGTCCACGGCTCCGGGCCGGTTCCTaGGCCCAGGACCCACCTGACTCACAAGGAAGCAGATTGAAAACG | + |
|
Preference number: 5 (lower is better) Translates to: VPFSAVGRPRLRAGS*AQDPPDSQGSRLKT Trigger: CGTTTTCAATCTGCTTCCTTGTGAGTCAGGTGGGTCCTGGGCCCAGGAACCGGCCCGGAGCCGTGGACGCCCTACAGCTGAGAAGGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374180.4 |
||
| CDS GCA 90 bp | CGTGTCCTTCACATCCCACGTCAGCAGTCGTATCTGCAGCCGGTGTaGCATGGAGGAGGCCAAGTCCACCCCAGTTCTGCCTCAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVLHIPRQQSYLQPV*HGGGQVHPSSASGP Trigger: GGGACCTGAGGCAGAACTGGGGTGGACTTGGCCTCCTCCATGGCACACCGGCTGCAGATACGACTGCTGACGTGGGATGTGAAGGACACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
||
| CDS CCA 90 bp | GTGTTCTTTAGGTACAGAATCCCTGACCACGGGGTCCAGTGCCTGTaGGCCAACCACCAGGAAGCTGTGCATGCCCACAGCCCGAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VFFRYRIPDHGVQCL*ANHQEAVHAHSPRP Trigger: GGGCCTCGGGCTGTGGGCATGCACAGCTTCCTGGTGGTTGGCCCACAGGCACTGGACCCCGTGGTCAGGGATTCTGTACCTAAAGAACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
||
| CDS GCA 90 bp | AGCCTGAGCAGCGTGTCCTTCACATCCCACGTCAGCAGTCGTATCTaGAGCCGGTGTGCCATGGAGGAGGCCAAGTCCACCCCAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSVSFTSHVSSRI*SRCAMEEAKSTPVL Trigger: CAGAACTGGGGTGGACTTGGCCTCCTCCATGGCACACCGGCTGCAGATACGACTGCTGACGTGGGATGTGAAGGACACGCTGCTCAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
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| CDS CCA 90 bp | TATGAGCAAGCCGCAAGGCCTCCTGGAAAATGCGGGGGTCCGGCTTaGGCCAGCCAGCAGCCTCGGAGGTCAGCACAAAGTCGAAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: YEQAARPPGKCGGPA*ASQQPRRSAQSRSV Trigger: AACACTTCGACTTTGTGCTGACCTCCGAGGCTGCTGGCTGGCCCAAGCCGGACCCCCGCATTTTCCAGGAGGCCTTGCGGCTTGCTCATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
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| CDS GCA 90 bp | GAGGATGTGTTCTTTAGGTACAGAATCCCTGACCACGGGGTCCAGTaGCTGTGGGCCAACCACCAGGAAGCTGTGCATGCCCACAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: EDVFFRYRIPDHGVQ*LWANHQEAVHAHSP Trigger: CGGGCTGTGGGCATGCACAGCTTCCTGGTGGTTGGCCCACAGGCACTGGACCCCGTGGTCAGGGATTCTGTACCTAAAGAACACATCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
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| CDS CCA 90 bp | CAGTTCTGCCTCAGGTCCCACGGTGGGTCCCAGGGGAAGCTGAGCTaGATAAGACCACCTCTGCGCAACCTAACAATCACCTCTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QFCLRSHGGSQGKLS*IRPPLRNLTITSFQ Trigger: CTGGAAAGAGGTGATTGTTAGGTTGCGCAGAGGTGGTCTTATCCAGCTCAGCTTCCCCTGGGACCCACCGTGGGACCTGAGGCAGAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
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| CDS CCA 90 bp | AAGAAGGGGCTCCCTGTCTCCAGGGTTTGTTTAAGGTTTTCTCCATaGCCTAGGGCCCAGCCACTTCCCTCACTGGCCTCAAAGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KKGLPVSRVCLRFSP*PRAQPLPSLASKPW Trigger: CCAGGGCTTTGAGGCCAGTGAGGGAAGTGGCTGGGCCCTAGGCCATGGAGAAAACCTTAAACAAACCCTGGAGACAGGGAGCCCCTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
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| CDS GCA 90 bp | CCGAGGCCCCTGGTAATCGCAGAGGTAATTATCCCCAACATGGGCTaGCACTACTGGTTCCATATGAGCAAGCCGCAAGGCCTCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PRPLVIAEVIIPNMG*HYWFHMSKPQGLLE Trigger: TTCCAGGAGGCCTTGCGGCTTGCTCATATGGAACCAGTAGTGGCAGCCCATGTTGGGGATAATTACCTCTGCGATTACCAGGGGCCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
||
| CDS-3UTR CAA 90 bp | CTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGACAAGGCCGTCCCCTaGAAACCTGAGGGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSTHCFIITVGDKGRRERDKAVP*KPEGPE Trigger: CTCTGGCCCCTCAGGTTTCAAGGGGACGGCCTTGTC...CCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CAA 90 bp | ATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCTGTGGGGAGTTTCGTTCTTGTaGCCCAGGCTGAAGTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ITVGDKGRRERGKGPELWGVSFL*PRLKCN Trigger: ATTGCACTTCAGCCTGGGCAACAAGAACGAAACTCC...CCACAGCTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS CCA 90 bp | CTGGTAATCGCAGAGGTAATTATCCCCAACATGGGCTGCCACTACTaGTTCCATATGAGCAAGCCGCAAGGCCTCCTGGAAAATGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVIAEVIIPNMGCHY*FHMSKPQGLLENAG Trigger: CCCCGCATTTTCCAGGAGGCCTTGCGGCTTGCTCATATGGAACCAGTAGTGGCAGCCCATGTTGGGGATAATTACCTCTGCGATTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
||
| CDS-3UTR CAA 90 bp | ATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCTGTGGCAAAGTACGGCTAAGTaGATACTTAGGGAAGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ITVGDKGRRERGKGPELWQSTAK*ILREGR Trigger: ACGCCCTTCCCTAAGTATCAACTTAGCCGTACTTTG...CCACAGCTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CAA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAGCCGTCGGTCAAAGTaGGAGATCACTGCCAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: STHCFIITVGDKGRRERGSRRSK*EITASL Trigger: GAGACTGGCAGTGATCTCCAACTTTGACCGACGGCT...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CAA 90 bp | ATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCTGTGGGCTAACATGAAGCACTaGGGAAATGTCTTCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ITVGDKGRRERGKGPELWANMKH*GNVFTA Trigger: TGCTGTGAAGACATTTCCCAAGTGCTTCATGTTAGC...CCACAGCTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CAA 90 bp | CTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGACCTCTTTCCAGGCCTaGTGGGTCAGATTTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSTHCFIITVGDKGRRERTSFQA*WVRFAG Trigger: GCCAGCAAATCTGACCCACAAGGCCTGGAAAGAGGT...CCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CAA 90 bp | GAGCTCAGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGCTCAAAGCCCTGGAGTaGAGCCCTCTAGGCAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ELSTHCFIITVGDKGRRELKALE*SPLGSQ Trigger: TTGACTGCCTAGAGGGCTCAACTCCAGGGCTTTGAG...CTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCTGAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CAA 90 bp | AGCACTCACTGCTTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGCCTTGTGGGTCAGATTaGCTGGCTAACATGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: STHCFIITVGDKGRRERGPCGSD*LANMKH Trigger: GTGCTTCATGTTAGCCAGCAAATCTGACCCACAAGG...CCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAAGCAGTGAGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CAA 90 bp | TTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGCCCTGTCTCCAGGGTTaGTTTAAGGTTTTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: FIITVGDKGRRERGKGPEPCLQG*FKVFSM Trigger: CATGGAGAAAACCTTAAACAAACCCTGGAGACAGGG...CTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS-3UTR CAA 90 bp | TTTATTATCACAGTAGGTGACAAAGGCCGCAGGGAGAGGGGGAAAGGTCCAGAGAAAGATCCTCTCATTTaGCAGGTGGGTAGACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FIITVGDKGRRERGKGPEKDPLI*QVGRQR Trigger: TCTCTGTCTACCCACCTGCAAAATGAGAGGATCTTT...CTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGATAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
||
| CDS TCA 90 bp | AATCACCTCTTTCCAGGCCTTGTGGGTCAGATTTGCTGGCTAACATaGAGCACTTGGGAAATGTCTTCACAGCACAAGATCCCAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NHLFPGLVGQICWLT*STWEMSSQHKIPRS Trigger: TGACCTTGGGATCTTGTGCTGTGAAGACATTTCCCAAGTGCTTCATGTTAGCCAGCAAATCTGACCCACAAGGCCTGGAAAGAGGTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
||
| CDS CCA 72 bp | CGCAGAATGTCTATAGCTGCCGTCGGCAGCGTGAGCTaGGGCGGCGGTCCTAGGGGCCTTGGCCGCGGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RRMSIAAVGSVS*GGGPRGLGRGR Trigger: TCGGCCGCGGCCAAGGCCCCTAGGACCGCCGCCCCAGCTCACGCTGCCGACGGCAGCTATAGACATTCTGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374180.4 ENST00000485934.1 |
||
| CDS TCA 72 bp | AGCCCTGTATGCCTGCCTGAAGCCTTGTTCCAGGGCTaGGGGCTCCACCTCCAGCCCATGGGCCCGGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SPVCLPEALFQG*GLHLQPMGPGL Trigger: AAGGCCCGGGCCCATGGGCTGGAGGTGGAGCCCTCAGCCCTGGAACAAGGCTTCAGGCAGGCATACAGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
||
| CDS GCA 72 bp | GGTGTGCCATGGAGGAGGCCAAGTCCACCCCAGTTCTaGCTCAGGTCCCACGGTGGGTCCCAGGGGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVPWRRPSPPQF*LRSHGGSQGKL Trigger: CAGCTTCCCCTGGGACCCACCGTGGGACCTGAGGCAGAACTGGGGTGGACTTGGCCTCCTCCATGGCACACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
||
| CDS CCA 72 bp | GCCGCAAGGCCTCCTGGAAAATGCGGGGGTCCGGCTTaGGCCAGCCAGCAGCCTCGGAGGTCAGCACAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: AARPPGKCGGPA*ASQQPRRSAQS Trigger: ACTTTGTGCTGACCTCCGAGGCTGCTGGCTGGCCCAAGCCGGACCCCCGCATTTTCCAGGAGGCCTTGCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
||
| CDS CAA 72 bp | AGCCGCAAGGCCTCCTGGAAAATGCGGGGGTCCGGCTaGGGCCAGCCAGCAGCCTCGGAGGTCAGCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRKASWKMRGSG*GQPAASEVSTK Trigger: CTTTGTGCTGACCTCCGAGGCTGCTGGCTGGCCCAAGCCGGACCCCCGCATTTTCCAGGAGGCCTTGCGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
||
| CDS TCA 72 bp | ACGGCTCCGGGCCGGTTCCTGGGCCCAGGACCCACCTaGCTCACAAGGAAGCAGATTGAAAACGCAGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: TAPGRFLGPGPT*LTRKQIENAAA Trigger: TGCGGCTGCGTTTTCAATCTGCTTCCTTGTGAGTCAGGTGGGTCCTGGGCCCAGGAACCGGCCCGGAGCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374180.4 |
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| CDS TCA 72 bp | AGGGCTCGGGAAAGGCGAAGTCCAGGAGCCCGGACCTaGCGCAGAATGTCTATAGCTGCCGTCGGCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: RARERRSPGART*RRMSIAAVGSV Trigger: CACGCTGCCGACGGCAGCTATAGACATTCTGCGTCAGGTCCGGGCTCCTGGACTTCGCCTTTCCCGAGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374180.4 ENST00000485934.1 |
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| CDS GCA 72 bp | AGCGTGTCCTTCACATCCCACGTCAGCAGTCGTATCTaGAGCCGGTGTGCCATGGAGGAGGCCAAGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: SVSFTSHVSSRI*SRCAMEEAKST Trigger: GGTGGACTTGGCCTCCTCCATGGCACACCGGCTGCAGATACGACTGCTGACGTGGGATGTGAAGGACACGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
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| CDS GCA 72 bp | CAAAGTTGGAGATCACTGCCAGTCTCAGACCCCGTGTaGGGCACTCCCTCAGGGTGTCCTCAGCCCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: QSWRSLPVSDPV*GTPSGCPQPHP Trigger: TGGATGGGGCTGAGGACACCCTGAGGGAGTGCCGCACACGGGGTCTGAGACTGGCAGTGATCTCCAACTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
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| CDS CCA 72 bp | TTTCTCCATGGCCTAGGGCCCAGCCACTTCCCTCACTaGCCTCAAAGCCCTGGAGTTGAGCCCTCTAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: FLHGLGPSHFPH*PQSPGVEPSRQ Trigger: CTGCCTAGAGGGCTCAACTCCAGGGCTTTGAGGCCAGTGAGGGAAGTGGCTGGGCCCTAGGCCATGGAGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
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| CDS CAA 72 bp | CCAGCCACTTCCCTCACTGGCCTCAAAGCCCTGGAGTaGAGCCCTCTAGGCAGTCAAGGGCAGGCAGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: PATSLTGLKALE*SPLGSQGQAGD Trigger: ATCTCCTGCCTGCCCTTGACTGCCTAGAGGGCTCAACTCCAGGGCTTTGAGGCCAGTGAGGGAAGTGGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
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| CDS GCA 72 bp | TTCTTTAGGTACAGAATCCCTGACCACGGGGTCCAGTaGCTGTGGGCCAACCACCAGGAAGCTGTGCATGCC | + |
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Preference number: 6 (lower is better) Translates to: FFRYRIPDHGVQ*LWANHQEAVHA Trigger: GGCATGCACAGCTTCCTGGTGGTTGGCCCACAGGCACTGGACCCCGTGGTCAGGGATTCTGTACCTAAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
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| CDS TCA 72 bp | TTATCCCCAACATGGGCTGCCACTACTGGTTCCATATaGGCAAGCCGCAAGGCCTCCTGGAAAATGCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: LSPTWAATTGSI*ASRKASWKMRG Trigger: CCCCCGCATTTTCCAGGAGGCCTTGCGGCTTGCTCATATGGAACCAGTAGTGGCAGCCCATGTTGGGGATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
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| CDS CCA 72 bp | CTCCCTGTCTCCAGGGTTTGTTTAAGGTTTTCTCCATaGCCTAGGGCCCAGCCACTTCCCTCACTGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LPVSRVCLRFSP*PRAQPLPSLAS Trigger: TGAGGCCAGTGAGGGAAGTGGCTGGGCCCTAGGCCATGGAGAAAACCTTAAACAAACCCTGGAGACAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
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| CDS CCA 72 bp | GCAGAGGTAATTATCCCCAACATGGGCTGCCACTACTaGTTCCATATGAGCAAGCCGCAAGGCCTCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: AEVIIPNMGCHY*FHMSKPQGLLE Trigger: TTCCAGGAGGCCTTGCGGCTTGCTCATATGGAACCAGTAGTGGCAGCCCATGTTGGGGATAATTACCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
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| CDS TCA 72 bp | AGAGCTGATCCCAGACAAGGCCGTCCCCTTGAAACCTaGGGGGCCAGAGTTCAAAGTACGGCTAAGTTGATA | + |
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Preference number: 6 (lower is better) Translates to: RADPRQGRPLET*GARVQSTAKLI Trigger: TATCAACTTAGCCGTACTTTGAACTCTGGCCCCTCAGGTTTCAAGGGGACGGCCTTGTCTGGGATCAGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS CAA 72 bp | GCAGTAATTTACCCCCAAATCACACAGGGAGTCACATaGGCACAGCTAAGACTAGAGCAGAGGGCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AVIYPQITQGVT*AQLRLEQRALA Trigger: AGCCAGAGCCCTCTGCTCTAGTCTTAGCTGTGCCAATGTGACTCCCTGTGTGATTTGGGGGTAAATTACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS TCA 72 bp | AAACCTGAGGGGCCAGAGTTCAAAGTACGGCTAAGTTaGTACTTAGGGAAGGGCGTCACTGGTAAATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: KPEGPEFKVRLS*YLGKGVTGKSG Trigger: CCCAGATTTACCAGTGACGCCCTTCCCTAAGTATCAACTTAGCCGTACTTTGAACTCTGGCCCCTCAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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| CDS CAA 90 bp | CTTTCCAGGCCTTGTGGGTCAGATTTGCTGGCTAACATGAAGCACTaGGGAAATGTCTTCACAGCACAAGATCCCAAGGTCACAGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LSRPCGSDLLANMKH*GNVFTAQDPKVTVS Trigger: ACTCACTGTGACCTTGGGATCTTGTGCTGTGAAGACATTTCCCAAGTGCTTCATGTTAGCCAGCAAATCTGACCCACAAGGCCTGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
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| CDS CCA 72 bp | CACAGCCAGGACCAGAACCCAAACTTCCAGACTCTCTaGCCAGTTCTTCCACTGTACCATGAGATATATTTG | + |
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Preference number: 6 (lower is better) Translates to: HSQDQNPNFQTL*PVLPLYHEIYL Trigger: CAAATATATCTCATGGTACAGTGGAAGAACTGGCCAGAGAGTCTGGAAGTTTGGGTTCTGGTCCTGGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000238379.9 ENST00000374180.4 |
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| CDS CAA 72 bp | CCTTGTGGGTCAGATTTGCTGGCTAACATGAAGCACTaGGGAAATGTCTTCACAGCACAAGATCCCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: PCGSDLLANMKH*GNVFTAQDPKV Trigger: GACCTTGGGATCTTGTGCTGTGAAGACATTTCCCAAGTGCTTCATGTTAGCCAGCAAATCTGACCCACAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
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| CDS TCA 72 bp | TTTCCAGGCCTTGTGGGTCAGATTTGCTGGCTAACATaGAGCACTTGGGAAATGTCTTCACAGCACAAGATC | + |
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Preference number: 6 (lower is better) Translates to: FPGLVGQICWLT*STWEMSSQHKI Trigger: GATCTTGTGCTGTGAAGACATTTCCCAAGTGCTTCATGTTAGCCAGCAAATCTGACCCACAAGGCCTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000238379.9 ENST00000374180.4 ENST00000485934.1 |
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| CDS TCA 72 bp | ATCTGGGGGAGCCTTGGAGGAAGTTTGTCCAGGAAATaGATTAAGGAGACTCATCCAAAGATCCTCTCATTT | + |
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Preference number: 6 (lower is better) Translates to: IWGSLGGSLSRK*IKETHPKILSF Trigger: AAATGAGAGGATCTTTGGATGAGTCTCCTTAATTCATTTCCTGGACAAACTTCCTCCAAGGCTCCCCCAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238379.9 |
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