Pregenerated sensors for HDGF (Homo sapiens)
Ensembl gene IDs: ENSG00000143321Ensembl transcript IDs: ENST00000357325.10, ENST00000368206.5, ENST00000368209.9, ENST00000465180.5, ENST00000469145.5, ENST00000471377.5, ENST00000477306.1, ENST00000482651.5, ENST00000495212.1, ENST00000537739.5
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACCCGCGGTTCTTGGCAGCGTGCTAGGCGCCGAGGGCGAGAGGAGTaGGCGCCGTGCCGCTCCGCGCACTGGGGTCCTCTCTGGACCTCG | + |
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Preference number: 5 (lower is better) Translates to: TRGSWQRARRRGREE*APCRSAHWGPLWTS Trigger: CGAGGTCCAGAGAGGACCCCAGTGCGCGGAGCGGCACGGCGCCCACTCCTCTCGCCCTCGGCGCCTAGCACGCTGCCAAGAACCGCGGGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368209.9 |
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| CDS GCA 90 bp | TCTTGGCAGCGTGCTAGGCGCCGAGGGCGAGAGGAGTGGGCGCCGTaGCGCTCCGCGCACTGGGGTCCTCTCTGGACCTCGCCGTGCTTA | + |
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Preference number: 5 (lower is better) Translates to: SWQRARRRGREEWAP*RSAHWGPLWTSPCL Trigger: TAAGCACGGCGAGGTCCAGAGAGGACCCCAGTGCGCGGAGCGGCACGGCGCCCACTCCTCTCGCCCTCGGCGCCTAGCACGCTGCCAAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368209.9 |
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| CDS CCA 90 bp | TGCTCCATCTCAATCCACAAATATTTACTGGGCACCCGCGGTTCTTaGCAGCGTGCTAGGCGCCGAGGGCGAGAGGAGTGGGCGCCGTGC | + |
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Preference number: 5 (lower is better) Translates to: CSISIHKYLLGTRGS*QRARRRGREEWAPC Trigger: GCACGGCGCCCACTCCTCTCGCCCTCGGCGCCTAGCACGCTGCCAAGAACCGCGGGTGCCCAGTAAATATTTGTGGATTGAGATGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368209.9 |
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| CDS GCA 90 bp | TGGCTCATCAATGACCAGCTTCCCTTCCTCGTCGCTGCTGCCCTCTaGATTCCCCTTCTTATCACCGTCACCCTCTGCAGCTTCGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: WLINDQLPFLVAAAL*IPLLITVTLCSFGL Trigger: GAGCCCGAAGCTGCAGAGGGTGACGGTGATAAGAAGGGGAATGCAGAGGGCAGCAGCGACGAGGAAGGGAAGCTGGTCATTGATGAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000357325.10 ENST00000368206.5 ENST00000368209.9 ENST00000465180.5 ENST00000469145.5 ENST00000471377.5 ENST00000482651.5 ENST00000495212.1 ENST00000537739.5 |
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| CDS GCA 90 bp | CTCCTTGGATTCCTCGTAAGGGAAGAGGTCTTTGGGGCCCAGGAATaGCCTGGTGAGAGATGGGAGACTGTGCTCTCAAGCCCCTCACTG | + |
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Preference number: 5 (lower is better) Translates to: LLGFLVREEVFGAQE*PGERWETVLSSPSL Trigger: CAGTGAGGGGCTTGAGAGCACAGTCTCCCATCTCTCACCAGGGCATTCCTGGGCCCCAAAGACCTCTTCCCTTACGAGGAATCCAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495212.1 |
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| CDS CCA 90 bp | TGCATTCCCCTTCTTATCACCGTCACCCTCTGCAGCTTCGGGCTCTaGTTCAGGCTCTTCCACACAGCTCTTTTTCTGGGAGGACTCTGT | + |
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Preference number: 5 (lower is better) Translates to: CIPLLITVTLCSFGL*FRLFHTALFLGGLC Trigger: ACAGAGTCCTCCCAGAAAAAGAGCTGTGTGGAAGAGCCTGAACCAGAGCCCGAAGCTGCAGAGGGTGACGGTGATAAGAAGGGGAATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000469145.5 ENST00000471377.5 |
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| CDS TCA 90 bp | AGGAGGAAACGCTTGAGTTTGGTAGCCAGGAGATGGCCAAGGAGTTaGGGCACAAATTGGCCACCTTCCGGGTGCATTCGATCTCGTTTC | + |
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Preference number: 5 (lower is better) Translates to: RRKRLSLVARRWPRS*GTNWPPSGCIRSRF Trigger: GAAACGAGATCGAATGCACCCGGAAGGTGGCCAATTTGTGCCTCAACTCCTTGGCCATCTCCTGGCTACCAAACTCAAGCGTTTCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368206.5 |
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| CDS GCA 90 bp | TGTGACCTACTCACATCACGATTTCTTGGCCCAAGTTACACCCTCTaGATGGGGAAGGGACTGTGGAGGCTCCTGGGGAGTTGTATTCCT | + |
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Preference number: 5 (lower is better) Translates to: CDLLTSRFLGPSYTL*MGKGLWRLLGSCIP Trigger: AGGAATACAACTCCCCAGGAGCCTCCACAGTCCCTTCCCCATGCAGAGGGTGTAACTTGGGCCAAGAAATCGTGATGTGAGTAGGTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465180.5 |
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| CDS CCA 90 bp | TGCATTCCCCTTCTTATCACCGTCACCCTCTGCAGCTTCGGGCTCTaGTTCAGGCTCTTCCACACAGCTCTTTTTCTGGGAGGACTGATA | + |
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Preference number: 5 (lower is better) Translates to: CIPLLITVTLCSFGL*FRLFHTALFLGGLI Trigger: TATCAGTCCTCCCAGAAAAAGAGCTGTGTGGAAGAGCCTGAACCAGAGCCCGAAGCTGCAGAGGGTGACGGTGATAAGAAGGGGAATGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000357325.10 ENST00000368206.5 ENST00000368209.9 ENST00000465180.5 ENST00000482651.5 ENST00000495212.1 ENST00000537739.5 |
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| CDS TCA 90 bp | TCTTTAAAATCTGGTTTAACGTTTTGTGTAGGTAGTACATGCCAATaGTGCAAACTGGCCCGGATTGTCAGAGCCTTGCCCATCTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: SLKSGLTFCVGSTCQ*CKLARIVRALPIFV Trigger: GACAAAGATGGGCAAGGCTCTGACAATCCGGGCCAGTTTGCATCATTGGCATGTACTACCTACACAAAACGTTAAACCAGATTTTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465180.5 |
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| CDS GCA 72 bp | CGTGCTAGGCGCCGAGGGCGAGAGGAGTGGGCGCCGTaGCGCTCCGCGCACTGGGGTCCTCTCTGGACCTCG | + |
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Preference number: 6 (lower is better) Translates to: RARRRGREEWAP*RSAHWGPLWTS Trigger: CGAGGTCCAGAGAGGACCCCAGTGCGCGGAGCGGCACGGCGCCCACTCCTCTCGCCCTCGGCGCCTAGCACG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368209.9 |
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| CDS CCA 72 bp | TCTTGGCAGCGTGCTAGGCGCCGAGGGCGAGAGGAGTaGGCGCCGTGCCGCTCCGCGCACTGGGGTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SWQRARRRGREE*APCRSAHWGPL Trigger: GAGAGGACCCCAGTGCGCGGAGCGGCACGGCGCCCACTCCTCTCGCCCTCGGCGCCTAGCACGCTGCCAAGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368209.9 |
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| CDS CCA 72 bp | TTGGAGGGGAGAAGGGTTAATGGTGTGGCCTTGGCCTaGCCTTGCCCCAGCCAGTGCCGGTCTCCTAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LEGRRVNGVALA*PCPSQCRSPRR Trigger: TCTCCTAGGAGACCGGCACTGGCTGGGGCAAGGCCAGGCCAAGGCCACACCATTAACCCTTCTCCCCTCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477306.1 |
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| CDS GCA 72 bp | GCCCTCTGCATTCCCCTTCTTATCACCGTCACCCTCTaGAGCTTCGGGCTCTGGTTCAGGCTCTTCCACACA | + |
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Preference number: 6 (lower is better) Translates to: ALCIPLLITVTL*SFGLWFRLFHT Trigger: TGTGTGGAAGAGCCTGAACCAGAGCCCGAAGCTGCAGAGGGTGACGGTGATAAGAAGGGGAATGCAGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000357325.10 ENST00000368206.5 ENST00000368209.9 ENST00000465180.5 ENST00000469145.5 ENST00000471377.5 ENST00000482651.5 ENST00000495212.1 ENST00000537739.5 |
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| CDS CCA 72 bp | CTGCCCTCTGCTCCATCTCAATCCACAAATATTTACTaGGCACCCGCGGTTCTTGGCAGCGTGCTAGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LPSAPSQSTNIY*APAVLGSVLGA Trigger: GGCGCCTAGCACGCTGCCAAGAACCGCGGGTGCCCAGTAAATATTTGTGGATTGAGATGGAGCAGAGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368209.9 |
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| CDS GCA 72 bp | TTCCTCGTAAGGGAAGAGGTCTTTGGGGCCCAGGAATaGCCTGGTGAGAGATGGGAGACTGTGCTCTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: FLVREEVFGAQE*PGERWETVLSS Trigger: GCTTGAGAGCACAGTCTCCCATCTCTCACCAGGGCATTCCTGGGCCCCAAAGACCTCTTCCCTTACGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495212.1 |
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| CDS TCA 72 bp | CGCTTGAGTTTGGTAGCCAGGAGATGGCCAAGGAGTTaGGGCACAAATTGGCCACCTTCCGGGTGCATTCGA | + |
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Preference number: 6 (lower is better) Translates to: RLSLVARRWPRS*GTNWPPSGCIR Trigger: TCGAATGCACCCGGAAGGTGGCCAATTTGTGCCTCAACTCCTTGGCCATCTCCTGGCTACCAAACTCAAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368206.5 |
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| CDS CCA 72 bp | TTGAAACATTGGTGGCTACAGGCTGTGAGGGAGGGTTaGAGGGGAGAAGGGTTAATGGTGTGGCCTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LKHWWLQAVREG*RGEGLMVWPWP Trigger: AGGCCAAGGCCACACCATTAACCCTTCTCCCCTCCAACCCTCCCTCACAGCCTGTAGCCACCAATGTTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477306.1 |
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| CDS CAA 90 bp | GGTTTTGGCCCTCAACACTGTGTGACCTACTCACATCACGATTTCTaGGCCCAAGTTACACCCTCTGCATGGGGAAGGGACTGTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GFGPQHCVTYSHHDF*AQVTPSAWGRDCGG Trigger: GCCTCCACAGTCCCTTCCCCATGCAGAGGGTGTAACTTGGGCCAAGAAATCGTGATGTGAGTAGGTCACACAGTGTTGAGGGCCAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465180.5 |
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| CDS CCA 72 bp | TTCCTCCCCTTTAACTCCCAACGGAGTCGAGGGTTTTaGCCCTCAACACTGTGTGACCTACTCACATCACGA | + |
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Preference number: 6 (lower is better) Translates to: FLPFNSQRSRGF*PSTLCDLLTSR Trigger: TCGTGATGTGAGTAGGTCACACAGTGTTGAGGGCCAAAACCCTCGACTCCGTTGGGAGTTAAAGGGGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465180.5 |
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| CDS CCA 72 bp | CTCGTTTCTCTAAGCTACTGTCTTGCCAAGGAGACTTaGACTCAACGGCTAGCTAACCCCGCAAAGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: LVSLSYCLAKET*TQRLANPAKMS Trigger: GCTCATCTTTGCGGGGTTAGCTAGCCGTTGAGTCCAAGTCTCCTTGGCAAGACAGTAGCTTAGAGAAACGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368206.5 |
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| CDS TCA 72 bp | TCTGGTTTAACGTTTTGTGTAGGTAGTACATGCCAATaGTGCAAACTGGCCCGGATTGTCAGAGCCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SGLTFCVGSTCQ*CKLARIVRALP Trigger: GGGCAAGGCTCTGACAATCCGGGCCAGTTTGCATCATTGGCATGTACTACCTACACAAAACGTTAAACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465180.5 |
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| CDS GCA 72 bp | GCAGTTAAGTGTGGACGTCTGTACACGGTTTCCGCCTaGCCTCTGCTCCATCTCAATCCACAAATATTTACT | + |
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Preference number: 6 (lower is better) Translates to: AVKCGRLYTVSA*PLLHLNPQIFT Trigger: AGTAAATATTTGTGGATTGAGATGGAGCAGAGGGCAGGCGGAAACCGTGTACAGACGTCCACACTTAACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368209.9 |
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