RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HDC (Homo sapiens)

Ensembl gene IDs: ENSG00000140287

Ensembl transcript IDs: ENST00000267845.8, ENST00000543581.5, ENST00000558679.1, ENST00000558761.5, ENST00000559190.5, ENST00000559683.1, ENST00000559816.1

Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCCTTTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTaGCTTAAACTCTTCGTTTGTATCCTATTGTGGGTCATGAACCCC +
Preference number: 1 (lower is better)
Translates to: GPFSLTRLLNPSGSC*LKLFVCILLWVMNP
Trigger: GGGGTTCATGACCCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAAAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
3UTR GCA 90 bp CTCGGCCCTTTCTCACTGACCAGACTGCTGAACCCATCTGGATCATaGTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGGTCATGAAC +
Preference number: 1 (lower is better)
Translates to: LGPFSLTRLLNPSGS*WLKLFVCILLWVMN
Trigger: GTTCATGACCCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAAAGGGCCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
3UTR-3UTR CCA 90 bp CCTCGGCCCTTTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTATAAGCACACAAAGTTaGCATACAATTGTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: PRPFLTDQTAEPIWIMLAISTQS*HTIVRG
Trigger: ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTAT...AGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAAAGGGCCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
3UTR-3UTR CCA 90 bp TCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTACCCTCGGCCCTTTCTCAGTTTGTATCCTATTGTaGGTCATGAACCCCTATGAG +
Preference number: 2 (lower is better)
Translates to: SCHKLNHRSCLSTLGPFSVCILL*VMNPYE
Trigger: CTCATAGGGGTTCATGACCCACAATAGGATACAAAC...TGAGAAAGGGCCGAGGGTAGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267845.8
3UTR-3UTR TCA 90 bp TTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGGTTCACAGAGTCCCTaGAGTATATCCTCAGACTCT +
Preference number: 2 (lower is better)
Translates to: FSLTRLLNPSGSCWLKLFGSQSP*SISSDS
Trigger: AGAGTCTGAGGATATACTTCAGGGACTCTGTGAACC...GAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
3UTR-3UTR TCA 90 bp AGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTAGGTTCACAGAGTCCCTaGAGTATATCCTCAGACTCT +
Preference number: 2 (lower is better)
Translates to: RLLNPSGSCWLKLFVCILGSQSP*SISSDS
Trigger: AGAGTCTGAGGATATACTTCAGGGACTCTGTGAACC...TAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
3UTR-3UTR CCA 90 bp TTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCATAAGCACACAAAGTTaGCATACAATTGTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: FSLTRLLNPSGSCWLKLFISTQS*HTIVRG
Trigger: ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTAT...GAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
3UTR-3UTR GCA 90 bp TTATTTCTGTGTTATATATCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTAACCCATCTGGATCATaGTGGCTTAAACTCTTCGTT +
Preference number: 2 (lower is better)
Translates to: LFLCYISCHKLNHRSCLSNPSGS*WLKLFV
Trigger: AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTT...AGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGATATATAACACAGAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267845.8
3UTR-3UTR CAA 90 bp CCTCGGCCCTTTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTCATAAGCACACAAAGTaGGCATACAATTGTGAGGGG +
Preference number: 3 (lower is better)
Translates to: PRPFLTDQTAEPIWIMLAHKHTK*AYNCEG
Trigger: CCCCTCACAATTGTATGCCAACTTTGTGTGCTTATG...AGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAAAGGGCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
3UTR-3UTR CAA 90 bp TTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCCATAAGCACACAAAGTaGGCATACAATTGTGAGGGG +
Preference number: 3 (lower is better)
Translates to: FSLTRLLNPSGSCWLKLFHKHTK*AYNCEG
Trigger: CCCCTCACAATTGTATGCCAACTTTGTGTGCTTATG...GAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
3UTR CCA 72 bp TCACTGACCAGACTGCTGAACCCATCTGGATCATGCTaGCTTAAACTCTTCGTTTGTATCCTATTGTGGGTC +
Preference number: 3 (lower is better)
Translates to: SLTRLLNPSGSC*LKLFVCILLWV
Trigger: GACCCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
3UTR GCA 72 bp TTCTCACTGACCAGACTGCTGAACCCATCTGGATCATaGTGGCTTAAACTCTTCGTTTGTATCCTATTGTGG +
Preference number: 3 (lower is better)
Translates to: FSLTRLLNPSGS*WLKLFVCILLW
Trigger: CCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CCTCGGCCCTTTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTCCGGCTCCCACACGCTaGGGCTGCTTGATGATCTTC +
Preference number: 4 (lower is better)
Translates to: PRPFLTDQTAEPIWIMLAPAPTR*GCLMIF
Trigger: GAAGATCATCAAGCAGCCTCAGCGTGTGGGAGCCGG...AGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAAAGGGCCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CCTCGGCCCTTTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTGATGGGGCCCAGCTCTaGCAGGCAGTCAAATGCACA +
Preference number: 4 (lower is better)
Translates to: PRPFLTDQTAEPIWIMLADGAQL*QAVKCT
Trigger: TGTGCATTTGACTGCCTGTCAGAGCTGGGCCCCATC...AGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAAAGGGCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CCTCGGCCCTTTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTCTTCCTGGCCTGGACTaGATCATCTCCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: PRPFLTDQTAEPIWIMLALPGLD*IISCPT
Trigger: AGTGGGGCAGGAGATGATCCAGTCCAGGCCAGGAAG...AGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAAAGGGCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp TCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTACCCTCGGCCCTTTCTCATCCTCGATGGCCTTCTaGAGAGCTTCCCCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: SCHKLNHRSCLSTLGPFSSSMAF*RASPRS
Trigger: ACTCCGAGGGGAAGCTCTTCAGAAGGCCATCGAGGA...TGAGAAAGGGCCGAGGGTAGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR TCA 90 bp CCTCGGCCCTTTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTCTGAGTTGGCATGCCTaGGGTAGATGGGATTCACAC +
Preference number: 4 (lower is better)
Translates to: PRPFLTDQTAEPIWIMLALSWHA*GRWDSH
Trigger: GTGTGAATCCCATCTACCTCAGGCATGCCAACTCAG...AGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAAAGGGCCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp TCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTGCCAGGCTGCACGTCTaGCGTCACACGTCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SLTRLLNPSGSCWLKLFVARLHV*RHTSLP
Trigger: CGGGAGAGACGTGTGACGCCAGACGTGCAGCCTGGC...AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTAAGGACGCCTCCGCCCTaGCTGCTGGGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RLLNPSGSCWLKLFVCILRTPPP*LLGWWC
Trigger: GCACCACCACCCCAGCAGCCAGGGCGGAGGCGTCCT...TAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp TCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTGTCGGTGGCCACGCCTaGGTTGGCATGCCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: SLTRLLNPSGSCWLKLFVVGGHA*VGMPEV
Trigger: TACCTCAGGCATGCCAACTCAGGCGTGGCCACCGAC...AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTCTCCGCCCTGGCTGCTaGGGTGGTGGTGCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LTRLLNPSGSCWLKLFVCLRPGC*GGGARS
Trigger: ACTTCTTGCACCACCACCCCAGCAGCCAGGGCGGAG...ACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp TCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTACCCTCGGCCCTTTCTCACTGGCACCCCTGATTTaGGAGATGAGGTTCCCAACC +
Preference number: 4 (lower is better)
Translates to: SCHKLNHRSCLSTLGPFSLAPLI*EMRFPT
Trigger: GGTTGGGAACCTCATCTCCCAAATCAGGGGTGCCAG...TGAGAAAGGGCCGAGGGTAGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR TCA 90 bp TCTGTGTTATATATCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTACCCTAGGAGGTGGAAGGCGTaGAAGGCGTGGAGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: SVLYIMSQAEPQKLPVYPRRWKA*KAWSSP
Trigger: CGGGCTGCTCCACGCCTTTCACGCCTTCCACCTCCT...AGGGTAGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGATATATAACACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR TCA 90 bp ACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCGCCCCACTGACAGACTaGAGGGACGTTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: TRLLNPSGSCWLKLFVCIAPLTD*RDVPQA
Trigger: GGCCTGTGGAACGTCCCTTCAGTCTGTCAGTGGGGC...GATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp TCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTCCGGCTCCCACACGCTaGGGCTGCTTGATGATCTTC +
Preference number: 4 (lower is better)
Translates to: SLTRLLNPSGSCWLKLFVPAPTR*GCLMIF
Trigger: GAAGATCATCAAGCAGCCTCAGCGTGTGGGAGCCGG...AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTGTGGGCAGTGGCTTCTaGGCACTCACTGGCACACTG +
Preference number: 4 (lower is better)
Translates to: LTRLLNPSGSCWLKLFVCVGSGF*ALTGTL
Trigger: CAGTGTGCCAGTGAGTGCTCAGAAGCCACTGCCCAC...ACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp TCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTACCCTCGGCCCTTTCTCAATGCACAGACCCCAGTaGTCCCTAGTGTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: SCHKLNHRSCLSTLGPFSMHRPQ*SLVLHR
Trigger: TCTGTGCAACACTAGGGACCACTGGGGTCTGTGCAT...TGAGAAAGGGCCGAGGGTAGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR TCA 90 bp CTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTGCACACTGTTGCAACTaGGGGAGCGCACCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LTRLLNPSGSCWLKLFVCAHCCN*GSAPSS
Trigger: AGAAGACGGTGCGCTCCCTCAGTTGCAACAGTGTGC...ACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp CCTCGGCCCTTTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTGATTTTGTTCTTCCTTaGTGCCAGCAGGGCAATCAA +
Preference number: 4 (lower is better)
Translates to: PRPFLTDQTAEPIWIMLADFVLP*CQQGNQ
Trigger: TTGATTGCCCTGCTGGCAGCAAGGAAGAACAAAATC...AGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAAAGGGCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp TCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGGCTGCTGGGGTGGTaGTGCAAGAAGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLTRLLNPSGSCWLKLFVWLLGW*CKKCSG
Trigger: TCCAGAGCACTTCTTGCACCACCACCCCAGCAGCCA...AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCAAGGACGCCTCCGCCCTaGCTGCTGGGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSRTPPP*LLGWWC
Trigger: GCACCACCACCCCAGCAGCCAGGGCGGAGGCGTCCT...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp TCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTCTTCCTGGCCTGGACTaGATCATCTCCTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: SLTRLLNPSGSCWLKLFVLPGLD*IISCPT
Trigger: AGTGGGGCAGGAGATGATCCAGTCCAGGCCAGGAAG...AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp TCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTCAAAGTGGATTCACTaGCCGTGCTCTGCAGGACGC +
Preference number: 4 (lower is better)
Translates to: SLTRLLNPSGSCWLKLFVSKWIH*PCSAGR
Trigger: GCGTCCTGCAGAGCACGGTCAGTGAATCCACTTTGA...AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTAGCTTCCCCTCGGAGTaGGAAGTTGTCATCCACAGG +
Preference number: 4 (lower is better)
Translates to: LTRLLNPSGSCWLKLFVCSFPSE*EVVIHR
Trigger: CCTGTGGATGACAACTTCTCACTCCGAGGGGAAGCT...ACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp TCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTACCCTCGGCCCTTTCTCAGTGCAAGAAGTGCTCTaGAAGTCCCAGCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: SCHKLNHRSCLSTLGPFSVQEVL*KSQHFC
Trigger: GCAAAAATGCTGGGACTTCCAGAGCACTTCTTGCAC...TGAGAAAGGGCCGAGGGTAGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR CCA 90 bp ACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCTGGCTGCTGGGGTGGTaGTGCAAGAAGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TRLLNPSGSCWLKLFVCIWLLGW*CKKCSG
Trigger: TCCAGAGCACTTCTTGCACCACCACCCCAGCAGCCA...GATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp TCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTCTGGCACCCCTGATTTaGGAGATGAGGTTCCCAACC +
Preference number: 4 (lower is better)
Translates to: SLTRLLNPSGSCWLKLFVLAPLI*EMRFPT
Trigger: GGTTGGGAACCTCATCTCCCAAATCAGGGGTGCCAG...AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp TTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCACAGCTTGTGCTTGGTaGCATCTGGGGCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FSLTRLLNPSGSCWLKLFTACAW*HLGPLL
Trigger: CAGAAGAGGCCCCAGATGCCACCAAGCACAAGCTGT...GAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTCCTGTGTCTAAACCATaGCCTGCAGAGGGCAACAGG +
Preference number: 4 (lower is better)
Translates to: LTRLLNPSGSCWLKLFVCPVSKP*PAEGNR
Trigger: CCTGTTGCCCTCTGCAGGCCATGGTTTAGACACAGG...ACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp TCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTCCTGTGTCTAAACCATaGCCTGCAGAGGGCAACAGG +
Preference number: 4 (lower is better)
Translates to: SLTRLLNPSGSCWLKLFVPVSKP*PAEGNR
Trigger: CCTGTTGCCCTCTGCAGGCCATGGTTTAGACACAGG...AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTTTGCCAACCAGTCCATaGCGTTCATCTCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LTRLLNPSGSCWLKLFVCLPTSP*RSSPAL
Trigger: CAGAGCTGGAGATGAACGTCATGGACTGGTTGGCAA...ACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGGATGGGGCCCAGCTCTaGCAGGCAGTCAAATGCACA +
Preference number: 4 (lower is better)
Translates to: LNPSGSCWLKLFVCILLWDGAQL*QAVKCT
Trigger: TGTGCATTTGACTGCCTGTCAGAGCTGGGCCCCATC...CCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp TCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTAGTGCTGACTCAGGATaGGAGTGGCAGCATCTCGAA +
Preference number: 4 (lower is better)
Translates to: SLTRLLNPSGSCWLKLFVSADSG*EWQHLE
Trigger: TTCGAGATGCTGCCACTCTCATCCTGAGTCAGCACT...AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp ACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCGGCACAGGAAGGCAGTaGCTGCATAAGCAGCATCGA +
Preference number: 4 (lower is better)
Translates to: TRLLNPSGSCWLKLFVCIGTGRQ*LHKQHR
Trigger: TCGATGCTGCTTATGCAGGCACTGCCTTCCTGTGCC...GATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp TCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTATCTCCCTTGGGCTCTaGCTCCTTCTCACAGATGGA +
Preference number: 4 (lower is better)
Translates to: SLTRLLNPSGSCWLKLFVISLGL*LLLTDG
Trigger: TCCATCTGTGAGAAGGAGCCAGAGCCCAAGGGAGAT...AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCAGCCAGGCTGCACGTCTaGCGTCACACGTCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSARLHV*RHTSLP
Trigger: CGGGAGAGACGTGTGACGCCAGACGTGCAGCCTGGC...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTCTCCGCCCTGGCTGCTaGGGTGGTGGTGCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCLRPGC*GGGARS
Trigger: ACTTCTTGCACCACCACCCCAGCAGCCAGGGCGGAG...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATGCACAGACCCCAGTaGTCCCTAGTGTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: LTRLLNPSGSCWLKLFVCMHRPQ*SLVLHR
Trigger: TCTGTGCAACACTAGGGACCACTGGGGTCTGTGCAT...ACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCACCTCACGGGCACAGATaGGGCCCAGCTCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSPHGHR*GPALTG
Trigger: GCCTGTCAGAGCTGGGCCCCATCTGTGCCCGTGAGG...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGCCTCACGGGCACAGATaGGGCCCAGCTCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: PKKNACTHKHTKLAYNCEPHGHR*GPALTG
Trigger: GCCTGTCAGAGCTGGGCCCCATCTGTGCCCGTGAGG...CTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTCATTTTCCCTTTTCATaGGACCGGCTCCCACACGCT +
Preference number: 4 (lower is better)
Translates to: LTRLLNPSGSCWLKLFVCHFPFS*DRLPHA
Trigger: AGCGTGTGGGAGCCGGTCCCATGAAAAGGGAAAATG...ACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp ACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCAGGACAGCTTGTGCTTaGTGGCATCTGGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: TRLLNPSGSCWLKLFVCIRTACA*WHLGPL
Trigger: AAGAGGCCCCAGATGCCACCAAGCACAAGCTGTCCT...GATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp TTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCAGATGGGATTCACACTaGAGGTCTGCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: FSLTRLLNPSGSCWLKLFRWDSH*RSAAAC
Trigger: ACAAGCTGCAGCAGACCTTCAGTGTGAATCCCATCT...GAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGTCGGTGGCCACGCCTaGGTTGGCATGCCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: PRKMHVHISTQSWHTIVRVGGHA*VGMPEV
Trigger: TACCTCAGGCATGCCAACTCAGGCGTGGCCACCGAC...CCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp AAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCGCCCCACTGACAGACTaGAGGGACGTTCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: KNACTHKHTKLAYNCEGFAPLTD*RDVPQA
Trigger: GGCCTGTGGAACGTCCCTTCAGTCTGTCAGTGGGGC...GAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp CCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGGTCATGCAATGTCCCCAAAGATaGTGTCCCAGCTGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: PSGSCWLKLFVCILLWVMQCPQR*CPSCRG
Trigger: ACCCCGACAGCTGGGACAGCATCTTTGGGGACATTG...CATGACCCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp AAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCGGCACCAAGCCCCGCTaGTTGTCTTCCTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: KNACTHKHTKLAYNCEGFGTKPR*LSSSMA
Trigger: GGCCATCGAGGAAGACAAGCAGCGGGGCTTGGTGCC...GAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp CCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGCACCAAGCCCCGCTaGTTGTCTTCCTCGATGGCC +
Preference number: 4 (lower is better)
Translates to: PKKNACTHKHTKLAYNCEGTKPR*LSSSMA
Trigger: GGCCATCGAGGAAGACAAGCAGCGGGGCTTGGTGCC...CTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp AGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTAGGCACAGGAAGGCAGTaGCTGCATAAGCAGCATCGA +
Preference number: 4 (lower is better)
Translates to: RLLNPSGSCWLKLFVCILGTGRQ*LHKQHR
Trigger: TCGATGCTGCTTATGCAGGCACTGCCTTCCTGTGCC...TAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp TCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTACCCTCGGCCCTTTCTCAAACCCATCTGGATCATaGTGGCTTAAACTCTTCGTT +
Preference number: 4 (lower is better)
Translates to: SCHKLNHRSCLSTLGPFSNPSGS*WLKLFV
Trigger: AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTT...TGAGAAAGGGCCGAGGGTAGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR CCA 90 bp AGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTAGCTCCTTCTCACAGATaGACACGCAGGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RLLNPSGSCWLKLFVCILAPSHR*TRRRWK
Trigger: CTTCCACCTCCTGCGTGTCCATCTGTGAGAAGGAGC...TAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR CCA 90 bp CCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGGTCATGCCAAGAGGTGAGGGCTaGGTAGTAGGCGTGCATATG +
Preference number: 4 (lower is better)
Translates to: PSGSCWLKLFVCILLWVMPRGEG*VVGVHM
Trigger: CATATGCACGCCTACTACCCAGCCCTCACCTCTTGG...CATGACCCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp ACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCGCTTGTCTTCCTCGATaGCCTTCTGAAGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: TRLLNPSGSCWLKLFVCIACLPR*PSEELP
Trigger: GGGAAGCTCTTCAGAAGGCCATCGAGGAAGACAAGC...GATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTTCCTCGATGGCCTTCTaGAGAGCTTCCCCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCSSMAF*RASPRS
Trigger: ACTCCGAGGGGAAGCTCTTCAGAAGGCCATCGAGGA...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp TCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTACCCTCGGCCCTTTCTCAAGGAAGGGTCGTTTCTaGCCAGAGATTCAAAATATT +
Preference number: 4 (lower is better)
Translates to: SCHKLNHRSCLSTLGPFSRKGRF*PEIQNI
Trigger: AATATTTTGAATCTCTGGTCAGAAACGACCCTTCCT...TGAGAAAGGGCCGAGGGTAGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR TCA 90 bp AGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTAAGTGCTGACTCAGGATaGGAGTGGCAGCATCTCGAA +
Preference number: 4 (lower is better)
Translates to: RLLNPSGSCWLKLFVCILSADSG*EWQHLE
Trigger: TTCGAGATGCTGCCACTCTCATCCTGAGTCAGCACT...TAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGGTCATGTGGGAAGTACAGTGCTaGCTCAGGATGAGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: PSGSCWLKLFVCILLWVMWEVQC*LRMRVA
Trigger: TGCCACTCTCATCCTGAGTCAGCACTGTACTTCCCA...CATGACCCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGTGGGCAGTGGCTTCTaGGCACTCACTGGCACACTG +
Preference number: 4 (lower is better)
Translates to: PKKNACTHKHTKLAYNCEVGSGF*ALTGTL
Trigger: CAGTGTGCCAGTGAGTGCTCAGAAGCCACTGCCCAC...CTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTAGGGGGATCTGCCAGTaGATGAAGTCGGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGRGICQ*MKSVAT
Trigger: CGTGGCCACCGACTTCATGCACTGGCAGATCCCCCT...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR GCA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCACGGCTCAGGGGGATCTaGCAGTGCATGAAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSRLRGI*QCMKSV
Trigger: CACCGACTTCATGCACTGGCAGATCCCCCTGAGCCG...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR GCA 90 bp CTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGGACTGGATCATCTCCTaGCCCACTGACAGACTGAAG +
Preference number: 4 (lower is better)
Translates to: LNPSGSCWLKLFVCILLWDWIIS*PTDRLK
Trigger: CTTCAGTCTGTCAGTGGGGCAGGAGATGATCCAGTC...CCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTCTGAACCACAGAAGCTaGCTGTCTACCCTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCLNHRS*LSTLGP
Trigger: AGGGCCGAGGGTAGACAGGCAGCTTCTGTGGTTCAG...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR CCA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCACCCTGGCTGCTGGGGTaGTGGTGCAAGAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSPWLLG*WCKKCS
Trigger: AGAGCACTTCTTGCACCACCACCCCAGCAGCCAGGG...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGCCCTGGCTGCTGGGGTaGTGGTGCAAGAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PRKMHVHISTQSWHTIVRPWLLG*WCKKCS
Trigger: AGAGCACTTCTTGCACCACCACCCCAGCAGCCAGGG...CCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTTCCCAACCCGAGGGCTaGGTTGGGAAGTACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCSQPEG*VGKYSA
Trigger: AGCACTGTACTTCCCAACCCAGCCCTCGGGTTGGGA...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTTCAAAGTGGATTCACTaGCCGTGCTCTGCAGGACGC +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCSKWIH*PCSAGR
Trigger: GCGTCCTGCAGAGCACGGTCAGTGAATCCACTTTGA...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTGCACACTGTTGCAACTaGGGGAGCGCACCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGAHCCN*GSAPSS
Trigger: AGAAGACGGTGCGCTCCCTCAGTTGCAACAGTGTGC...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp AAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCCCATTTCAGTACCCATaGAGTCGGTGGCCACGCCTG +
Preference number: 4 (lower is better)
Translates to: KNACTHKHTKLAYNCEGFPFQYP*SRWPRL
Trigger: CAGGCGTGGCCACCGACTTCATGGGTACTGAAATGG...GAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543581.5
CDS-3UTR GCA 90 bp CCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGTGCATATGGGGGCTCTaGCAATGTACCACCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRKMHVHISTQSWHTIVRCIWGL*QCTTPG
Trigger: GCCTGGGGTGGTACATTGGCAGAGCCCCCATATGCA...CCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTCTGCTGGGGTGGTGGTaGAAGAAGTGCTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCLLGWW*KKCSGS
Trigger: ACTTCCAGAGCACTTCTTGCACCACCACCCCAGCAG...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp ACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCATGATTAACTTGTCCTaGATAGTGGCCGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: TRLLNPSGSCWLKLFVCIMINLS*IVAGMR
Trigger: CCTCATCCCGGCCACTATCCAGGACAAGTTAATCAT...GATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGTCCCAACCCGAGGGCTaGGTTGGGAAGTACAGTGCT +
Preference number: 4 (lower is better)
Translates to: PRKMHVHISTQSWHTIVRSQPEG*VGKYSA
Trigger: AGCACTGTACTTCCCAACCCAGCCCTCGGGTTGGGA...CCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGTCACAGAGGCCTCTGTaGGCAGTGGCTTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: PKKNACTHKHTKLAYNCESQRPL*AVASEH
Trigger: GTGCTCAGAAGCCACTGCCCACAGAGGCCTCTGTGA...CTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCACAGAGGCCTCTGTaGGCAGTGGCTTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGSQRPL*AVASEH
Trigger: GTGCTCAGAAGCCACTGCCCACAGAGGCCTCTGTGA...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCAAGCTTCCCCTCGGAGTaGGAAGTTGTCATCCACAGG +
Preference number: 4 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSSFPSE*EVVIHR
Trigger: CCTGTGGATGACAACTTCTCACTCCGAGGGGAAGCT...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTCTGAGTTGGCATGCCTaGGGTAGATGGGATTCACAC +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCLSWHA*GRWDSH
Trigger: GTGTGAATCCCATCTACCTCAGGCATGCCAACTCAG...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGGTCATGGGTTCACAGAGTCCCTaGAGTATATCCTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: PSGSCWLKLFVCILLWVMGSQSP*SISSDS
Trigger: AGAGTCTGAGGATATACTTCAGGGACTCTGTGAACC...CATGACCCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp CCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGTCTCTCCCGCACAGTaGTCAGGTACTGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: PRKMHVHISTQSWHTIVRVSPAQ*SGTGRC
Trigger: ACATCTGCCAGTACCTGAGCACTGTGCGGGAGAGAC...CCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTCAATGTCCCCAAAGATaGTGTCCCAGCTGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGQCPQR*CPSCRG
Trigger: ACCCCGACAGCTGGGACAGCATCTTTGGGGACATTG...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp AAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCCTGCTGGGGTGGTGGTaGAAGAAGTGCTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: KNACTHKHTKLAYNCEGFLLGWW*KKCSGS
Trigger: ACTTCCAGAGCACTTCTTGCACCACCACCCCAGCAG...GAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp CTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGACACTGAAGGTCTGCTaGAGCTTGTACTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LNPSGSCWLKLFVCILLWTLKVC*SLYLSL
Trigger: CAAGGACAAGTACAAGCTGCAGCAGACCTTCAGTGT...CCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp TCTGTGTTATATATCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTACCCTTTCACACTGAAGGTCTaGTGCAGCTTGTACTTGTCC +
Preference number: 4 (lower is better)
Translates to: SVLYIMSQAEPQKLPVYPFTLKV*CSLYLS
Trigger: GGACAAGTACAAGCTGCAGCAGACCTTCAGTGTGAA...AGGGTAGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGATATATAACACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR GCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGACTGGATCATCTCCTaGCCCACTGACAGACTGAAG +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCDWIIS*PTDRLK
Trigger: CTTCAGTCTGTCAGTGGGGCAGGAGATGATCCAGTC...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTCCAAGAGGTGAGGGCTaGGTAGTAGGCGTGCATATG +
Preference number: 4 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGPRGEG*VVGVHM
Trigger: CATATGCACGCCTACTACCCAGCCCTCACCTCTTGG...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTATGATCTTCCTGGCCTaGACTGGATCATCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCMIFLA*TGSSPA
Trigger: GGCAGGAGATGATCCAGTCCAGGCCAGGAAGATCAT...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp TCTGTGTTATATATCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTACCCTAAAGCAGTCATCAACTaGGTCCAGCAGGGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: SVLYIMSQAEPQKLPVYPKAVIN*VQQGFK
Trigger: CTTGAAACCCTGCTGGACCCAGTTGATGACTGCTTT...AGGGTAGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGATATATAACACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR CCA 90 bp CCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGACAGCTTGTGCTTGGTaGCATCTGGGGCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PRKMHVHISTQSWHTIVRTACAW*HLGPLL
Trigger: CAGAAGAGGCCCCAGATGCCACCAAGCACAAGCTGT...CCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGAGGACAGCTTGTGCTTaGTGGCATCTGGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: PRKMHVHISTQSWHTIVRRTACA*WHLGPL
Trigger: AAGAGGCCCCAGATGCCACCAAGCACAAGCTGTCCT...CCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp TTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCCCATCTGGATCATGCTaGCTTAAACTCTTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: FSLTRLLNPSGSCWLKLFPSGSC*LKLFVC
Trigger: ACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGG...GAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTCCATCTGGATCATGCTaGCTTAAACTCTTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: LTRLLNPSGSCWLKLFVCPSGSC*LKLFVC
Trigger: ACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGG...ACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTTGCCAACCAGTCCATaGCGTTCATCTCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGLPTSP*RSSPAL
Trigger: CAGAGCTGGAGATGAACGTCATGGACTGGTTGGCAA...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp AAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCTGGGAAGTACAGTGCTaGCTCAGGATGAGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KNACTHKHTKLAYNCEGFWEVQC*LRMRVA
Trigger: TGCCACTCTCATCCTGAGTCAGCACTGTACTTCCCA...GAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp CTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGAAGTCCCAGCATTTTTaGCAACCAGTCCATGACGTT +
Preference number: 4 (lower is better)
Translates to: LNPSGSCWLKLFVCILLWKSQHF*QPVHDV
Trigger: AACGTCATGGACTGGTTGGCAAAAATGCTGGGACTT...CCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGATCTCCCTTGGGCTCTaGCTCCTTCTCACAGATGGA +
Preference number: 4 (lower is better)
Translates to: PKKNACTHKHTKLAYNCEISLGL*LLLTDG
Trigger: TCCATCTGTGAGAAGGAGCCAGAGCCCAAGGGAGAT...CTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCAGCTTGTCTTCCTCGATaGCCTTCTGAAGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSACLPR*PSEELP
Trigger: GGGAAGCTCTTCAGAAGGCCATCGAGGAAGACAAGC...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCAATGATCTTCCTGGCCTaGACTGGATCATCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSMIFLA*TGSSPA
Trigger: GGCAGGAGATGATCCAGTCCAGGCCAGGAAGATCAT...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGCATTTTCCCTTTTCATaGGACCGGCTCCCACACGCT +
Preference number: 4 (lower is better)
Translates to: PRKMHVHISTQSWHTIVRHFPFS*DRLPHA
Trigger: AGCGTGTGGGAGCCGGTCCCATGAAAAGGGAAAATG...CCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
3UTR CAA 72 bp CCCAAGAAAAATGCATGTACACATAAGCACACAAAGTaGGCATACAATTGTGAGGGGTTCACAGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PKKNACTHKHTK*AYNCEGFTESL
Trigger: CAGGGACTCTGTGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTAGATGGGATTCACACTaGAGGTCTGCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGRWDSH*RSAAAC
Trigger: ACAAGCTGCAGCAGACCTTCAGTGTGAATCCCATCT...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCATGGCAGCATCTCGAATaGGATTCCAGTCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSWQHLE*DSSLSG
Trigger: TCCTGAGAGACTGGAATCTCATTCGAGATGCTGCCA...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGTGGCAGCATCTCGAATaGGATTCCAGTCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PKKNACTHKHTKLAYNCEWQHLE*DSSLSG
Trigger: TCCTGAGAGACTGGAATCTCATTCGAGATGCTGCCA...CTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTTATCATGTCACAAGCTaGACCACAGAAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCYHVTS*TTEAAC
Trigger: ACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGATA...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR GCA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTGGTGGTGCAAGAAGTaGTCTGGAAGTCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGWWCKK*SGSPSI
Trigger: AATGCTGGGACTTCCAGAGCACTTCTTGCACCACCA...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp AAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCTGGTGGTGCAAGAAGTaGTCTGGAAGTCCCAGCATT +
Preference number: 4 (lower is better)
Translates to: KNACTHKHTKLAYNCEGFWWCKK*SGSPSI
Trigger: AATGCTGGGACTTCCAGAGCACTTCTTGCACCACCA...GAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCACTTCTGAGCACTCACTaGCACACTGTTGCAACTGAG +
Preference number: 4 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSLLSTH*HTVATE
Trigger: CTCAGTTGCAACAGTGTGCCAGTGAGTGCTCAGAAG...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTTATATCCTCAGACTCTaGCTGAAGGCCCTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCYILRL*LKALCL
Trigger: TAGACACAGGGCCTTCAGCCAGAGTCTGAGGATATA...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp ACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCATAAGCACACAAAGTTaGCATACAATTGTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: TRLLNPSGSCWLKLFVCIISTQS*HTIVRG
Trigger: ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTAT...GATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTGTCTGACATGTGCTTaGAGATTCTTCACCCCGAAG +
Preference number: 4 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGCLTCA*RFFTPK
Trigger: CTTCGGGGTGAAGAATCTTCAAGCACATGTCAGACA...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR TCA 90 bp CTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGAGGAAGGGTCGTTTCTaGCCAGAGATTCAAAATATT +
Preference number: 4 (lower is better)
Translates to: LNPSGSCWLKLFVCILLWRKGRF*PEIQNI
Trigger: AATATTTTGAATCTCTGGTCAGAAACGACCCTTCCT...CCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGTTCACAGAGTCCCTaGAGTATATCCTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: PKKNACTHKHTKLAYNCEGSQSP*SISSDS
Trigger: AGAGTCTGAGGATATACTTCAGGGACTCTGTGAACC...CTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGATTTTGTTCTTCCTTaGTGCCAGCAGGGCAATCAA +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCDFVLP*CQQGNQ
Trigger: TTGATTGCCCTGCTGGCAGCAAGGAAGAACAAAATC...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCAACACTGAAGGTCTGCTaGAGCTTGTACTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSTLKVC*SLYLSL
Trigger: CAAGGACAAGTACAAGCTGCAGCAGACCTTCAGTGT...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp CCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGTTCACACTGAAGGTCTaGTGCAGCTTGTACTTGTCC +
Preference number: 4 (lower is better)
Translates to: PRKMHVHISTQSWHTIVRFTLKV*CSLYLS
Trigger: GGACAAGTACAAGCTGCAGCAGACCTTCAGTGTGAA...CCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCGTGCAAGAAGTGCTCTaGAAGTCCCAGCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: KNACTHKHTKLAYNCEGFVQEVL*KSQHFC
Trigger: GCAAAAATGCTGGGACTTCCAGAGCACTTCTTGCAC...GAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTATGATTAACTTGTCCTaGATAGTGGCCGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGMINLS*IVAGMR
Trigger: CCTCATCCCGGCCACTATCCAGGACAAGTTAATCAT...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCTCCCTAGTGGTAAACTaGGATGTCACAGTGAAACGG +
Preference number: 4 (lower is better)
Translates to: KNACTHKHTKLAYNCEGFSLVVN*DVTVKR
Trigger: CCGTTTCACTGTGACATCCCAGTTTACCACTAGGGA...GAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGAAAGCAGTCATCAACTaGGTCCAGCAGGGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: PKKNACTHKHTKLAYNCEKAVIN*VQQGFK
Trigger: CTTGAAACCCTGCTGGACCCAGTTGATGACTGCTTT...CTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTATATCCTCAGACTCTaGCTGAAGGCCCTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGYILRL*LKALCL
Trigger: TAGACACAGGGCCTTCAGCCAGAGTCTGAGGATATA...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTCCAGTACAGTCAAAATaGACCATCATCCACTTGGAA +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCPVQSK*TIIHLE
Trigger: TTCCAAGTGGATGATGGTGCATTTTGACTGTACTGG...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCAACCATGTCTGACATGTaGTTGAAGATTCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSTMSDM*LKILHP
Trigger: GGGGTGAAGAATCTTCAAGCACATGTCAGACATGGT...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR GCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTAACCCATCTGGATCATaGTGGCTTAAACTCTTCGTT +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCNPSGS*WLKLFV
Trigger: AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTT...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGTTTGTATCCTATTGTaGGTCATGAACCCCTATGAG +
Preference number: 4 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCVCILL*VMNPYE
Trigger: CTCATAGGGGTTCATGACCCACAATAGGATACAAAC...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR GCA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTCCAGTACAGTCAAAATaGACCATCATCCACTTGGAA +
Preference number: 4 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGPVQSK*TIIHLE
Trigger: TTCCAAGTGGATGATGGTGCATTTTGACTGTACTGG...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CCA 90 bp CCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGTTTGTATCCTATTGTaGGTCATGAACCCCTATGAG +
Preference number: 4 (lower is better)
Translates to: PRKMHVHISTQSWHTIVRVCILL*VMNPYE
Trigger: CTCATAGGGGTTCATGACCCACAATAGGATACAAAC...CCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR TCA 90 bp CCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGTTTCAGTACCATGTCTaGCATGTGCTTGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: PKKNACTHKHTKLAYNCEFQYHV*HVLEDS
Trigger: AGAATCTTCAAGCACATGTCAGACATGGTACTGAAA...CTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR CCA 90 bp TTATTTCTGTGTTATATATCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTATAAGCACACAAAGTTaGCATACAATTGTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LFLCYISCHKLNHRSCLSISTQS*HTIVRG
Trigger: ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTAT...AGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGATATATAACACAGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267845.8
3UTR CAA 72 bp GGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATaGTGGGTCATGAACCCCTATGAGAATTTGATTAAA +
Preference number: 4 (lower is better)
Translates to: GSCWLKLFVCIL*WVMNPYENLIK
Trigger: TTTAATCAAATTCTCATAGGGGTTCATGACCCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS TCA 90 bp GCTCTGGCTCCTTCTCACAGATGGACACGCAGGAGGTGGAAGGCGTaGAAGGCGTGGAGCAGCCCGGCTTCCCTCTTGCCAGTCCTGCGC +
Preference number: 5 (lower is better)
Translates to: ALAPSHRWTRRRWKA*KAWSSPASLLPVLR
Trigger: GCGCAGGACTGGCAAGAGGGAAGCCGGGCTGCTCCACGCCTTTCACGCCTTCCACCTCCTGCGTGTCCATCTGTGAGAAGGAGCCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000558679.1
ENST00000558761.5
CDS GCA 90 bp GGAGGTGGAAGGCGTGAAAGGCGTGGAGCAGCCCGGCTTCCCTCTTaGCAGTCCTGCGCACTCCCTGGCAGCCAGTGTGGGCCCTTTATT +
Preference number: 5 (lower is better)
Translates to: GGGRRERRGAARLPS*QSCALPGSQCGPFI
Trigger: AATAAAGGGCCCACACTGGCTGCCAGGGAGTGCGCAGGACTGGCAAGAGGGAAGCCGGGCTGCTCCACGCCTTTCACGCCTTCCACCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558679.1
CDS CCA 90 bp AGCACTCTCAGGCAGCTGGGCTCGCAGGTAGCCAGGCTGCACGTCTaGCGTCACACGTCTCTCCCGCACAGTGCTCAGGTACTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: STLRQLGSQVARLHV*RHTSLPHSAQVLAD
Trigger: ATCTGCCAGTACCTGAGCACTGTGCGGGAGAGACGTGTGACGCCAGACGTGCAGCCTGGCTACCTGCGAGCCCAGCTGCCTGAGAGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000558761.5
ENST00000559683.1
CDS GCA 90 bp ACCGTGCTCTGCAGGACGCCTCCGCCCTGGCTGCTGGGGTGGTGGTaGAAGAAGTGCTCTGGAAGTCCCAGCATTTTTGCCAACCAGTCC +
Preference number: 5 (lower is better)
Translates to: TVLCRTPPPWLLGWW*KKCSGSPSIFANQS
Trigger: GGACTGGTTGGCAAAAATGCTGGGACTTCCAGAGCACTTCTTGCACCACCACCCCAGCAGCCAGGGCGGAGGCGTCCTGCAGAGCACGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000559683.1
CDS CCA 90 bp CTGACCGTGCTCTGCAGGACGCCTCCGCCCTGGCTGCTGGGGTGGTaGTGCAAGAAGTGCTCTGGAAGTCCCAGCATTTTTGCCAACCAG +
Preference number: 5 (lower is better)
Translates to: LTVLCRTPPPWLLGW*CKKCSGSPSIFANQ
Trigger: CTGGTTGGCAAAAATGCTGGGACTTCCAGAGCACTTCTTGCACCACCACCCCAGCAGCCAGGGCGGAGGCGTCCTGCAGAGCACGGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000559683.1
CDS TCA 90 bp GAGGAGCCCCCATTCTTCACAGAGGCCTCTGTGGGCAGTGGCTTCTaGGCACTCACTGGCACACTGTTGCAACTGAGGGAGCGCACCGTC +
Preference number: 5 (lower is better)
Translates to: EEPPFFTEASVGSGF*ALTGTLLQLRERTV
Trigger: GACGGTGCGCTCCCTCAGTTGCAACAGTGTGCCAGTGAGTGCTCAGAAGCCACTGCCCACAGAGGCCTCTGTGAAGAATGGGGGCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS CCA 90 bp TCACTGACCGTGCTCTGCAGGACGCCTCCGCCCTGGCTGCTGGGGTaGTGGTGCAAGAAGTGCTCTGGAAGTCCCAGCATTTTTGCCAAC +
Preference number: 5 (lower is better)
Translates to: SLTVLCRTPPPWLLG*WCKKCSGSPSIFAN
Trigger: GTTGGCAAAAATGCTGGGACTTCCAGAGCACTTCTTGCACCACCACCCCAGCAGCCAGGGCGGAGGCGTCCTGCAGAGCACGGTCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000559683.1
CDS GCA 90 bp CTGAGGCTGCTTGATGATCTTCCTGGCCTGGACTGGATCATCTCCTaGCCCACTGACAGACTGAAGGGACGTTCCACAGGCCCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: LRLLDDLPGLDWIIS*PTDRLKGRSTGPGS
Trigger: AGAGCCTGGGCCTGTGGAACGTCCCTTCAGTCTGTCAGTGGGGCAGGAGATGATCCAGTCCAGGCCAGGAAGATCATCAAGCAGCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS CCA 90 bp GACGCCTCCGCCCTGGCTGCTGGGGTGGTGGTGCAAGAAGTGCTCTaGAAGTCCCAGCATTTTTGCCAACCAGTCCATGACGTTCATCTC +
Preference number: 5 (lower is better)
Translates to: DASALAAGVVVQEVL*KSQHFCQPVHDVHL
Trigger: GAGATGAACGTCATGGACTGGTTGGCAAAAATGCTGGGACTTCCAGAGCACTTCTTGCACCACCACCCCAGCAGCCAGGGCGGAGGCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000559683.1
CDS CCA 90 bp GCGTGGAGCAGCCCGGCTTCCCTCTTGCCAGTCCTGCGCACTCCCTaGCAGCCAGTGTGGGCCCTTTATTTAAAGGGTTCTTTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: AWSSPASLLPVLRTP*QPVWALYLKGSFFD
Trigger: GTCAAAGAAAGAACCCTTTAAATAAAGGGCCCACACTGGCTGCCAGGGAGTGCGCAGGACTGGCAAGAGGGAAGCCGGGCTGCTCCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558679.1
CDS TCA 90 bp AAGACGGGCACCAAGCCCCGCTGCTTGTCTTCCTCGATGGCCTTCTaGAGAGCTTCCCCTCGGAGTGAGAAGTTGTCATCCACAGGCAGA +
Preference number: 5 (lower is better)
Translates to: KTGTKPRCLSSSMAF*RASPRSEKLSSTGR
Trigger: TCTGCCTGTGGATGACAACTTCTCACTCCGAGGGGAAGCTCTTCAGAAGGCCATCGAGGAAGACAAGCAGCGGGGCTTGGTGCCCGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000558761.5
ENST00000559190.5
CDS GCA 90 bp GGTAGCCAGGCTGCACGTCTGGCGTCACACGTCTCTCCCGCACAGTaGTCAGGTACTGGCAGATGTAATCCACCATCTCTCTCCCTAGAA +
Preference number: 5 (lower is better)
Translates to: GSQAARLASHVSPAQ*SGTGRCNPPSLSLE
Trigger: TTCTAGGGAGAGAGATGGTGGATTACATCTGCCAGTACCTGAGCACTGTGCGGGAGAGACGTGTGACGCCAGACGTGCAGCCTGGCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559683.1
CDS CCA 90 bp CCTCTCTCTCTGTACTCCTCAGGCTCCATCATCTCCCTTGGGCTCTaGCTCCTTCTCACAGATGGACACGCAGGAGGTGGAAGGCGTGAA +
Preference number: 5 (lower is better)
Translates to: PLSLYSSGSIISLGL*LLLTDGHAGGGRRE
Trigger: TTCACGCCTTCCACCTCCTGCGTGTCCATCTGTGAGAAGGAGCCAGAGCCCAAGGGAGATGATGGAGCCTGAGGAGTACAGAGAGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000558679.1
ENST00000558761.5
CDS CCA 90 bp CTCTCTCCCTCTCTCTCTGTACTCCTCAGGCTCCATCATCTCCCTTaGGCTCTGGCTCCTTCTCACAGATGGACACGCAGGAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LSPSLSVLLRLHHLP*ALAPSHRWTRRRWK
Trigger: CTTCCACCTCCTGCGTGTCCATCTGTGAGAAGGAGCCAGAGCCCAAGGGAGATGATGGAGCCTGAGGAGTACAGAGAGAGAGGGAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000558679.1
ENST00000558761.5
CDS CCA 90 bp CACAGACAAAGACGGGCACCAAGCCCCGCTGCTTGTCTTCCTCGATaGCCTTCTGAAGAGCTTCCCCTCGGAGTGAGAAGTTGTCATCCA +
Preference number: 5 (lower is better)
Translates to: HRQRRAPSPAACLPR*PSEELPLGVRSCHP
Trigger: TGGATGACAACTTCTCACTCCGAGGGGAAGCTCTTCAGAAGGCCATCGAGGAAGACAAGCAGCGGGGCTTGGTGCCCGTCTTTGTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558761.5
ENST00000559190.5
CDS TCA 90 bp AGATGGAGGCCATTTTCCCTTTTCATGGGACCGGCTCCCACACGCTaGGGCTGCTTGATGATCTTCCTGGCCTGGACTGGATCATCTCCT +
Preference number: 5 (lower is better)
Translates to: RWRPFSLFMGPAPTR*GCLMIFLAWTGSSP
Trigger: AGGAGATGATCCAGTCCAGGCCAGGAAGATCATCAAGCAGCCTCAGCGTGTGGGAGCCGGTCCCATGAAAAGGGAAAATGGCCTCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS CCA 90 bp GACTTACAAAGACGGGCACCAAGCCCCGCTGCTTGTCTTCCTCGATaGCCTTCTGAAGAGCTTCCCCTCGGAGTGAGAAGTTGTCATCCA +
Preference number: 5 (lower is better)
Translates to: DLQRRAPSPAACLPR*PSEELPLGVRSCHP
Trigger: TGGATGACAACTTCTCACTCCGAGGGGAAGCTCTTCAGAAGGCCATCGAGGAAGACAAGCAGCGGGGCTTGGTGCCCGTCTTTGTAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558679.1
CDS-3UTR CAA 90 bp CCTCGGCCCTTTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTGTGAATCCCAAGCAGTaGATGGCATCAGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: PRPFLTDQTAEPIWIMLAVNPKQ*MASASM
Trigger: CATGCTGGCTGATGCCATCAACTGCTTGGGATTCAC...AGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAAAGGGCCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS TCA 90 bp GAGATGAGGTTCCCAACCCGAGGGCTGGGTTGGGAAGTACAGTGCTaGCTCAGGATGAGAGTGGCAGCATCTCGAATGAGATTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: EMRFPTRGLGWEVQC*LRMRVAASRMRFQS
Trigger: AGACTGGAATCTCATTCGAGATGCTGCCACTCTCATCCTGAGTCAGCACTGTACTTCCCAACCCAGCCCTCGGGTTGGGAACCTCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS TCA 90 bp CAGGAAGGAGGACAGCTTGTGCTTGGTGGCATCTGGGGCCTCTTCTaGAAAGCAGTCATCAACTGGGTCCAGCAGGGTTTCAAGATGGAG +
Preference number: 5 (lower is better)
Translates to: QEGGQLVLGGIWGLF*KAVINWVQQGFKME
Trigger: CTCCATCTTGAAACCCTGCTGGACCCAGTTGATGACTGCTTTTCAGAAGAGGCCCCAGATGCCACCAAGCACAAGCTGTCCTCCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS-3UTR CAA 90 bp CCTCGGCCCTTTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTAGCTTGTACTTGTCCTaGACCCAGAACCCAGTACAG +
Preference number: 5 (lower is better)
Translates to: PRPFLTDQTAEPIWIMLASLYLS*TQNPVQ
Trigger: CTGTACTGGGTTCTGGGTCAAGGACAAGTACAAGCT...AGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAAAGGGCCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS CCA 90 bp CTGGGTAAAGGGCCAGCACCCTCTTGGCCTCAGCCTAGAACATCCTaGCACAGAAATCAATTTCCCACCAGCACAGAGAGCAATGTCAGT +
Preference number: 5 (lower is better)
Translates to: LGKGPAPSWPQPRTS*HRNQFPTSTESNVS
Trigger: ACTGACATTGCTCTCTGTGCTGGTGGGAAATTGATTTCTGTGCCAGGATGTTCTAGGCTGAGGCCAAGAGGGTGCTGGCCCTTTACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558761.5
ENST00000559816.1
CDS-3UTR CAA 90 bp TTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCACCAAGCCCCGCTGCTaGTCTTCCTCGATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: FSLTRLLNPSGSCWLKLFTKPRC*SSSMAF
Trigger: GAAGGCCATCGAGGAAGACAAGCAGCGGGGCTTGGT...GAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp TCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTCTCACTGGCACACTGTaGCAACTGAGGGAGCGCACC +
Preference number: 5 (lower is better)
Translates to: SLTRLLNPSGSCWLKLFVLTGTL*QLRERT
Trigger: GGTGCGCTCCCTCAGTTGCAACAGTGTGCCAGTGAG...AACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS TCA 90 bp GGTGTGGAGATGGGAGCAGGTGGAGTCAGTTTGAAGAAGTGGGGCTaGAGGAGGCATCATTACCTCCGAATGGGAAAGTCTACAAAGCCT +
Preference number: 5 (lower is better)
Translates to: GVEMGAGGVSLKKWG*RRHHYLRMGKSTKP
Trigger: AGGCTTTGTAGACTTTCCCATTCGGAGGTAATGATGCCTCCTTCAGCCCCACTTCTTCAAACTGACTCCACCTGCTCCCATCTCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559816.1
CDS TCA 90 bp AGGGGAGGTATGAAGTGGGGAAAGATGTCTCGCACCTGGCCAAGCTaGGTGGTGGGCTGCAAGGATGATGTGCTTTGGCTAAATGAGAAA +
Preference number: 5 (lower is better)
Translates to: RGGMKWGKMSRTWPS*VVGCKDDVLWLNEK
Trigger: TTTCTCATTTAGCCAAAGCACATCATCCTTGCAGCCCACCACTCAGCTTGGCCAGGTGCGAGACATCTTTCCCCACTTCATACCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559816.1
CDS CCA 90 bp AATTGTGAGGGGTTCACAGAGTCCCTGAAGTATATCCTCAGACTCTaGCTGAAGGCCCTGTGTCTAAACCATGGCCTGCAGAGGGCAACA +
Preference number: 5 (lower is better)
Translates to: NCEGFTESLKYILRL*LKALCLNHGLQRAT
Trigger: TGTTGCCCTCTGCAGGCCATGGTTTAGACACAGGGCCTTCAGCCAGAGTCTGAGGATATACTTCAGGGACTCTGTGAACCCCTCACAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS CCA 90 bp GAATGGGAAAGTCTACAAAGCCTCACCCTTGCCTTTTTCTTCCACTaGGTAAAGGGCCAGCACCCTCTTGGCCTCAGCCTAGAACATCCT +
Preference number: 5 (lower is better)
Translates to: EWESLQSLTLAFFFH*VKGQHPLGLSLEHP
Trigger: AGGATGTTCTAGGCTGAGGCCAAGAGGGTGCTGGCCCTTTACCCAGTGGAAGAAAAAGGCAAGGGTGAGGCTTTGTAGACTTTCCCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558761.5
ENST00000559816.1
CDS-3UTR CAA 90 bp CCTCGGCCCTTTCTCACTGACCAGACTGCTGAACCCATCTGGATCATGCTGGCTTTCATTTCCAGGATTTaGTTCTTCCTTGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PRPFLTDQTAEPIWIMLAFISRI*FFLAAS
Trigger: GCTGGCAGCAAGGAAGAACAAAATCCTGGAAATGAA...AGCCAGCATGATCCAGATGGGTTCAGCAGTCTGGTCAGTGAGAAAGGGCCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS TCA 90 bp CTGCTTGTCTTCCTCGATGGCCTTCTGAAGAGCTTCCCCTCGGAGTaGGAAGTTGTCATCCACAGGCAGAAATTTCATCTTCACAAGGGA +
Preference number: 5 (lower is better)
Translates to: LLVFLDGLLKSFPSE*EVVIHRQKFHLHKG
Trigger: TCCCTTGTGAAGATGAAATTTCTGCCTGTGGATGACAACTTCTCACTCCGAGGGGAAGCTCTTCAGAAGGCCATCGAGGAAGACAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000558761.5
ENST00000559190.5
CDS CCA 90 bp GAAAGGCAATGTCCAGGGATCCCTGGAAGAGACCCTCATGACCTTTaGTGGTTCTTCCCATGTCTCTGCATTGACCAAAGAGGAACAAGA +
Preference number: 5 (lower is better)
Translates to: ERQCPGIPGRDPHDL*WFFPCLCIDQRGTR
Trigger: TCTTGTTCCTCTTTGGTCAATGCAGAGACATGGGAAGAACCACCAAAGGTCATGAGGGTCTCTTCCAGGGATCCCTGGACATTGCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558761.5
ENST00000559190.5
CDS-3UTR CAA 90 bp CCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGGTCATGGCTCCATCATCTCCCTaGGGCTCTGGCTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: PSGSCWLKLFVCILLWVMAPSSP*GSGSFS
Trigger: TGAGAAGGAGCCAGAGCCCAAGGGAGATGATGGAGC...CATGACCCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp CTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGAACCCGAGGGCTGGGTaGGGAAGTACAGTGCTGACT +
Preference number: 5 (lower is better)
Translates to: LNPSGSCWLKLFVCILLWNPRAG*GSTVLT
Trigger: AGTCAGCACTGTACTTCCCAACCCAGCCCTCGGGTT...CCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp CCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGGTCATGAGGAAGGAGGACAGCTaGTGCTTGGTGGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: PSGSCWLKLFVCILLWVMRKEDS*CLVASG
Trigger: CCCAGATGCCACCAAGCACAAGCTGTCCTCCTTCCT...CATGACCCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp CTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGAGGAAGGAGGACAGCTaGTGCTTGGTGGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: LNPSGSCWLKLFVCILLWRKEDS*CLVASG
Trigger: CCCAGATGCCACCAAGCACAAGCTGTCCTCCTTCCT...CCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS CCA 90 bp GTGGTAAACTGGGATGTCACAGTGAAACGGATGATTAACTTGTCCTaGATAGTGGCCGGGATGAGGAAGAGACGGCCAGCTTTAGCTATT +
Preference number: 5 (lower is better)
Translates to: VVNWDVTVKRMINLS*IVAGMRKRRPALAI
Trigger: AATAGCTAAAGCTGGCCGTCTCTTCCTCATCCCGGCCACTATCCAGGACAAGTTAATCATCCGTTTCACTGTGACATCCCAGTTTACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS CCA 90 bp AGGCAATGTCCAGGGATCCCTGGAAGAGACCCTCATGACCTTTGGTaGTTCTTCCCATGTCTCTGCATTGACCAAAGAGGAACAAGAATA +
Preference number: 5 (lower is better)
Translates to: RQCPGIPGRDPHDLW*FFPCLCIDQRGTRI
Trigger: TATTCTTGTTCCTCTTTGGTCAATGCAGAGACATGGGAAGAACCACCAAAGGTCATGAGGGTCTCTTCCAGGGATCCCTGGACATTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558761.5
ENST00000559190.5
CDS TCA 90 bp TTCCTCACATCCAAGTTCTATCATTCTAAGCTTAGGCATATATCCTaGCTTACAAAGACGGGCACCAAGCCCCGCTGCTTGTCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: FLTSKFYHSKLRHIS*LTKTGTKPRCLSSS
Trigger: CGAGGAAGACAAGCAGCGGGGCTTGGTGCCCGTCTTTGTAAGTCAGGATATATGCCTAAGCTTAGAATGATAGAACTTGGATGTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558679.1
CDS-3UTR CAA 90 bp AAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCGAGGACAGCTTGTGCTaGGTGGCATCTGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: KNACTHKHTKLAYNCEGFEDSLC*VASGAS
Trigger: AGAGGCCCCAGATGCCACCAAGCACAAGCTGTCCTC...GAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp CCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGAGGACAGCTTGTGCTaGGTGGCATCTGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: PKKNACTHKHTKLAYNCEEDSLC*VASGAS
Trigger: AGAGGCCCCAGATGCCACCAAGCACAAGCTGTCCTC...CTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp CCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGCTCACTGGCACACTGTaGCAACTGAGGGAGCGCACC +
Preference number: 5 (lower is better)
Translates to: PRKMHVHISTQSWHTIVRLTGTL*QLRERT
Trigger: GGTGCGCTCCCTCAGTTGCAACAGTGTGCCAGTGAG...CCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCAGCTCCATCATCTCCCTaGGGCTCTGGCTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSAPSSP*GSGSFS
Trigger: TGAGAAGGAGCCAGAGCCCAAGGGAGATGATGGAGC...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp AGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTAGGATTTTGTTCTTCCTaGCTGCCAGCAGGGCAATCA +
Preference number: 5 (lower is better)
Translates to: RLLNPSGSCWLKLFVCILGFCSS*LPAGQS
Trigger: TGATTGCCCTGCTGGCAGCAAGGAAGAACAAAATCC...TAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp AGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTACCTCGGAGTGAGAAGTaGTCATCCACAGGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: RLLNPSGSCWLKLFVCILPRSEK*SSTGRN
Trigger: ATTTCTGCCTGTGGATGACAACTTCTCACTCCGAGG...TAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp AGACTGCTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTAAGCTTGTACTTGTCCTaGACCCAGAACCCAGTACAG +
Preference number: 5 (lower is better)
Translates to: RLLNPSGSCWLKLFVCILSLYLS*TQNPVQ
Trigger: CTGTACTGGGTTCTGGGTCAAGGACAAGTACAAGCT...TAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAGCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp CTGAACCCATCTGGATCATGCTGGCTTAAACTCTTCGTTTGTATCCTATTGTGGAAACGGATGATTAACTaGTCCTGGATAGTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: LNPSGSCWLKLFVCILLWKRMIN*SWIVAG
Trigger: CCCGGCCACTATCCAGGACAAGTTAATCATCCGTTT...CCACAATAGGATACAAACGAAGAGTTTAAGCCAGCATGATCCAGATGGGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCAAACCCGAGGGCTGGGTaGGGAAGTACAGTGCTGACT +
Preference number: 5 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSNPRAG*GSTVLT
Trigger: AGTCAGCACTGTACTTCCCAACCCAGCCCTCGGGTT...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS CCA 90 bp CGAATGAGATTCCAGTCTCTCAGGATGTCATCCCTAGTGGTAAACTaGGATGTCACAGTGAAACGGATGATTAACTTGTCCTGGATAGTG +
Preference number: 5 (lower is better)
Translates to: RMRFQSLRMSSLVVN*DVTVKRMINLSWIV
Trigger: CACTATCCAGGACAAGTTAATCATCCGTTTCACTGTGACATCCCAGTTTACCACTAGGGATGACATCCTGAGAGACTGGAATCTCATTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS-3UTR CAA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTCAGTGGTCCCTAGTGTaGCACAGACAAAGACGGGCA +
Preference number: 5 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGQWSLV*HRQRRA
Trigger: TGCCCGTCTTTGTCTGTGCAACACTAGGGACCACTG...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCACAGTGGTCCCTAGTGTaGCACAGACAAAGACGGGCA +
Preference number: 5 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSQWSLV*HRQRRA
Trigger: TGCCCGTCTTTGTCTGTGCAACACTAGGGACCACTG...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTAAGGTCTGCTGCAGCTaGTACTTGTCCTTGACCCAG +
Preference number: 5 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCKVCCS*YLSLTQ
Trigger: CTGGGTCAAGGACAAGTACAAGCTGCAGCAGACCTT...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp TTATTTCTGTGTTATATATCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTTCTGGCACCCCTGATTaGGGAGATGAGGTTCCCAAC +
Preference number: 5 (lower is better)
Translates to: LFLCYISCHKLNHRSCLSSGTPD*GDEVPN
Trigger: GTTGGGAACCTCATCTCCCAAATCAGGGGTGCCAGA...AGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGATATATAACACAGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR CAA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCATCTGGCACCCCTGATTaGGGAGATGAGGTTCCCAAC +
Preference number: 5 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSSGTPD*GDEVPN
Trigger: GTTGGGAACCTCATCTCCCAAATCAGGGGTGCCAGA...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp AAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCGTGAATCCCAAGCAGTaGATGGCATCAGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: KNACTHKHTKLAYNCEGFVNPKQ*MASASM
Trigger: CATGCTGGCTGATGCCATCAACTGCTTGGGATTCAC...GAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp TCTGTGTTATATATCATGTCACAAGCTGAACCACAGAAGCTGCCTGTCTACCCTTGCACCATCATCCACTaGGAAGGATTAAAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SVLYIMSQAEPQKLPVYPCTIIH*EGLKVK
Trigger: CTTCACCTTTAATCCTTCCAAGTGGATGATGGTGCA...AGGGTAGACAGGCAGCTTCTGTGGTTCAGCTTGTGACATGATATATAACACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR CAA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCAAAGGTCTGCTGCAGCTaGTACTTGTCCTTGACCCAG +
Preference number: 5 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSKVCCS*YLSLTQ
Trigger: CTGGGTCAAGGACAAGTACAAGCTGCAGCAGACCTT...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTAAACGGATGATTAACTaGTCCTGGATAGTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCKRMIN*SWIVAG
Trigger: CCCGGCCACTATCCAGGACAAGTTAATCATCCGTTT...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp AAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCCCTCGGAGTGAGAAGTaGTCATCCACAGGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: KNACTHKHTKLAYNCEGFPRSEK*SSTGRN
Trigger: ATTTCTGCCTGTGGATGACAACTTCTCACTCCGAGG...GAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp CGCCCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTATGTCTGACATGTGCTaGAAGATTCTTCACCCCGAA +
Preference number: 5 (lower is better)
Translates to: RPKKNACTHKHTKLAYNCMSDMC*KILHPE
Trigger: TTCGGGGTGAAGAATCTTCAAGCACATGTCAGACAT...ACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGGGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000267845.8
CDS-3UTR CAA 90 bp CCCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGTTCATTTCCAGGATTTaGTTCTTCCTTGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PKKNACTHKHTKLAYNCEFISRI*FFLAAS
Trigger: GCTGGCAGCAAGGAAGAACAAAATCCTGGAAATGAA...CTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp CCAAGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGTGCACCATCATCCACTaGGAAGGATTAAAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: PRKMHVHISTQSWHTIVRCTIIH*EGLKVK
Trigger: CTTCACCTTTAATCCTTCCAAGTGGATGATGGTGCA...CCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp AGAAAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTCATAAGCACACAAAGTaGGCATACAATTGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: RKMHVHISTQSWHTIVRGHKHTK*AYNCEG
Trigger: CCCCTCACAATTGTATGCCAACTTTGTGTGCTTATG...ACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS-3UTR CAA 90 bp AAAATGCATGTACACATAAGCACACAAAGTTGGCATACAATTGTGAGGGGTTCACATAAGCACACAAAGTaGGCATACAATTGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: KMHVHISTQSWHTIVRGSHKHTK*AYNCEG
Trigger: CCCCTCACAATTGTATGCCAACTTTGTGTGCTTATG...TGAACCCCTCACAATTGTATGCCAACTTTGTGTGCTTATGTGTACATGCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000543581.5
CDS GCA 72 bp AGGCGTGGAGCAGCCCGGCTTCCCTCTTGCCAGTCCTaGGCACTCCCTGGCAGCCAGTGTGGGCCCTTTATT +
Preference number: 6 (lower is better)
Translates to: RRGAARLPSCQS*ALPGSQCGPFI
Trigger: AATAAAGGGCCCACACTGGCTGCCAGGGAGTGCGCAGGACTGGCAAGAGGGAAGCCGGGCTGCTCCACGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558679.1
CDS TCA 72 bp AGCATCGATGTGGAGCCACAGCCCCTCACGGGCACCTaGGGAGGCAAACATCACCTGGCCGGAGGGGAGGTA +
Preference number: 6 (lower is better)
Translates to: SIDVEPQPLTGT*GGKHHLAGGEV
Trigger: TACCTCCCCTCCGGCCAGGTGATGTTTGCCTCCTCAGGTGCCCGTGAGGGGCTGTGGCTCCACATCGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559816.1
CDS TCA 72 bp CCTTCTCACAGATGGACACGCAGGAGGTGGAAGGCGTaGAAGGCGTGGAGCAGCCCGGCTTCCCTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: PSHRWTRRRWKA*KAWSSPASLLP
Trigger: TGGCAAGAGGGAAGCCGGGCTGCTCCACGCCTTTCACGCCTTCCACCTCCTGCGTGTCCATCTGTGAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000558679.1
ENST00000558761.5
CDS GCA 72 bp TCAGAAACCCCCGGAACTCGGGGCACAGGAAGGCAGTaGCTGCATAAGCAGCATCGATGTGGAGCCACAGCC +
Preference number: 6 (lower is better)
Translates to: SETPGTRGTGRQ*LHKQHRCGATA
Trigger: GGCTGTGGCTCCACATCGATGCTGCTTATGCAGGCACTGCCTTCCTGTGCCCCGAGTTCCGGGGGTTTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS CCA 72 bp AGACGGGCACCAAGCCCCGCTGCTTGTCTTCCTCGATaGCCTTCTGAAGAGCTTCCCCTCGGAGTGAGAAGT +
Preference number: 6 (lower is better)
Translates to: RRAPSPAACLPR*PSEELPLGVRS
Trigger: ACTTCTCACTCCGAGGGGAAGCTCTTCAGAAGGCCATCGAGGAAGACAAGCAGCGGGGCTTGGTGCCCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000558761.5
ENST00000559190.5
CDS CAA 72 bp CACGCAGGGCTGGATGCCCAGGTGAATCCCAAGCAGTaGATGGCATCAGCCAGCATGTCTCCTAGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: HAGLDAQVNPKQ*MASASMSPSRE
Trigger: CTCCCTGCTAGGAGACATGCTGGCTGATGCCATCAACTGCTTGGGATTCACCTGGGCATCCAGCCCTGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000559683.1
CDS CAA 90 bp GGCACCCCTGATTTGGGAGATGAGGTTCCCAACCCGAGGGCTGGGTaGGGAAGTACAGTGCTGACTCAGGATGAGAGTGGCAGCATCTCG +
Preference number: 6 (lower is better)
Translates to: GTPDLGDEVPNPRAG*GSTVLTQDESGSIS
Trigger: CGAGATGCTGCCACTCTCATCCTGAGTCAGCACTGTACTTCCCAACCCAGCCCTCGGGTTGGGAACCTCATCTCCCAAATCAGGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS TCA 72 bp GGGGATCTGCCAGTGCATGAAGTCGGTGGCCACGCCTaGGTTGGCATGCCTGAGGTAGATGGGATTCACACT +
Preference number: 6 (lower is better)
Translates to: GDLPVHEVGGHA*VGMPEVDGIHT
Trigger: AGTGTGAATCCCATCTACCTCAGGCATGCCAACTCAGGCGTGGCCACCGACTTCATGCACTGGCAGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000559816.1
CDS GCA 72 bp GCTGCACGTCTGGCGTCACACGTCTCTCCCGCACAGTaGTCAGGTACTGGCAGATGTAATCCACCATCTCTC +
Preference number: 6 (lower is better)
Translates to: AARLASHVSPAQ*SGTGRCNPPSL
Trigger: GAGAGATGGTGGATTACATCTGCCAGTACCTGAGCACTGTGCGGGAGAGACGTGTGACGCCAGACGTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000558761.5
ENST00000559683.1
CDS CCA 72 bp CTGTACTCCTCAGGCTCCATCATCTCCCTTGGGCTCTaGCTCCTTCTCACAGATGGACACGCAGGAGGTGGA +
Preference number: 6 (lower is better)
Translates to: LYSSGSIISLGL*LLLTDGHAGGG
Trigger: TCCACCTCCTGCGTGTCCATCTGTGAGAAGGAGCCAGAGCCCAAGGGAGATGATGGAGCCTGAGGAGTACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000558679.1
ENST00000558761.5
CDS CAA 90 bp TCTCTCTCCCTCTCTCTCTGTACTCCTCAGGCTCCATCATCTCCCTaGGGCTCTGGCTCCTTCTCACAGATGGACACGCAGGAGGTGGAA +
Preference number: 6 (lower is better)
Translates to: SLSLSLCTPQAPSSP*GSGSFSQMDTQEVE
Trigger: TTCCACCTCCTGCGTGTCCATCTGTGAGAAGGAGCCAGAGCCCAAGGGAGATGATGGAGCCTGAGGAGTACAGAGAGAGAGGGAGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000558679.1
ENST00000558761.5
CDS TCA 72 bp ACCAAGCCCCGCTGCTTGTCTTCCTCGATGGCCTTCTaGAGAGCTTCCCCTCGGAGTGAGAAGTTGTCATCC +
Preference number: 6 (lower is better)
Translates to: TKPRCLSSSMAF*RASPRSEKLSS
Trigger: GGATGACAACTTCTCACTCCGAGGGGAAGCTCTTCAGAAGGCCATCGAGGAAGACAAGCAGCGGGGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000558761.5
ENST00000559190.5
CDS TCA 72 bp CCATTTTCCCTTTTCATGGGACCGGCTCCCACACGCTaGGGCTGCTTGATGATCTTCCTGGCCTGGACTGGA +
Preference number: 6 (lower is better)
Translates to: PFSLFMGPAPTR*GCLMIFLAWTG
Trigger: TCCAGTCCAGGCCAGGAAGATCATCAAGCAGCCTCAGCGTGTGGGAGCCGGTCCCATGAAAAGGGAAAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS TCA 72 bp CCATTCTTCACAGAGGCCTCTGTGGGCAGTGGCTTCTaGGCACTCACTGGCACACTGTTGCAACTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: PFFTEASVGSGF*ALTGTLLQLRE
Trigger: CTCCCTCAGTTGCAACAGTGTGCCAGTGAGTGCTCAGAAGCCACTGCCCACAGAGGCCTCTGTGAAGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS TCA 72 bp CACAGAGGGAAGATACTTACAGATGGGGCCCAGCTCTaGCAGGCAGTCAAATGCACAGACCCCAGTGGTCCC +
Preference number: 6 (lower is better)
Translates to: HRGKILTDGAQL*QAVKCTDPSGP
Trigger: GGGACCACTGGGGTCTGTGCATTTGACTGCCTGTCAGAGCTGGGCCCCATCTGTAAGTATCTTCCCTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558761.5
ENST00000559190.5
CDS GCA 72 bp CTTGATGATCTTCCTGGCCTGGACTGGATCATCTCCTaGCCCACTGACAGACTGAAGGGACGTTCCACAGGC +
Preference number: 6 (lower is better)
Translates to: LDDLPGLDWIIS*PTDRLKGRSTG
Trigger: GCCTGTGGAACGTCCCTTCAGTCTGTCAGTGGGGCAGGAGATGATCCAGTCCAGGCCAGGAAGATCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS CCA 72 bp CCAGCTCTGACAGGCAGTCAAATGCACAGACCCCAGTaGTCCCTAGTGTTGCACAGACAAAGACGGGCACCA +
Preference number: 6 (lower is better)
Translates to: PALTGSQMHRPQ*SLVLHRQRRAP
Trigger: TGGTGCCCGTCTTTGTCTGTGCAACACTAGGGACCACTGGGGTCTGTGCATTTGACTGCCTGTCAGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558761.5
ENST00000559190.5
CDS CAA 72 bp GATTTGGGAGATGAGGTTCCCAACCCGAGGGCTGGGTaGGGAAGTACAGTGCTGACTCAGGATGAGAGTGGC +
Preference number: 6 (lower is better)
Translates to: DLGDEVPNPRAG*GSTVLTQDESG
Trigger: GCCACTCTCATCCTGAGTCAGCACTGTACTTCCCAACCCAGCCCTCGGGTTGGGAACCTCATCTCCCAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS TCA 72 bp TTCCCAACCCGAGGGCTGGGTTGGGAAGTACAGTGCTaGCTCAGGATGAGAGTGGCAGCATCTCGAATGAGA +
Preference number: 6 (lower is better)
Translates to: FPTRGLGWEVQC*LRMRVAASRMR
Trigger: TCTCATTCGAGATGCTGCCACTCTCATCCTGAGTCAGCACTGTACTTCCCAACCCAGCCCTCGGGTTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS CAA 72 bp GATTCACTGACCGTGCTCCAGGTGAATCCCAAGCAGTaGATGGCATCAGCCAGCATGTCTCCTAGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: DSLTVLQVNPKQ*MASASMSPSRE
Trigger: CTCCCTGCTAGGAGACATGCTGGCTGATGCCATCAACTGCTTGGGATTCACCTGGAGCACGGTCAGTGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559190.5
CDS TCA 72 bp AGCCATTTCAGTACCCATGAAGTCGGTGGCCACGCCTaGGTTGGCATGCCTGAGGTAGATGGGATTCACACT +
Preference number: 6 (lower is better)
Translates to: SHFSTHEVGGHA*VGMPEVDGIHT
Trigger: AGTGTGAATCCCATCTACCTCAGGCATGCCAACTCAGGCGTGGCCACCGACTTCATGGGTACTGAAATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543581.5
CDS CCA 72 bp GGGTTCACAGAGTCCCTGAAGTATATCCTCAGACTCTaGCTGAAGGCCCTGTGTCTAAACCATGGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: GFTESLKYILRL*LKALCLNHGLQ
Trigger: CTGCAGGCCATGGTTTAGACACAGGGCCTTCAGCCAGAGTCTGAGGATATACTTCAGGGACTCTGTGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS CCA 72 bp AGTCTACAAAGCCTCACCCTTGCCTTTTTCTTCCACTaGGTAAAGGGCCAGCACCCTCTTGGCCTCAGCCTA +
Preference number: 6 (lower is better)
Translates to: SLQSLTLAFFFH*VKGQHPLGLSL
Trigger: TAGGCTGAGGCCAAGAGGGTGCTGGCCCTTTACCCAGTGGAAGAAAAAGGCAAGGGTGAGGCTTTGTAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558761.5
ENST00000559816.1
CDS CCA 72 bp TGGGATGTCACAGTGAAACGGATGATTAACTTGTCCTaGATAGTGGCCGGGATGAGGAAGAGACGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: WDVTVKRMINLS*IVAGMRKRRPA
Trigger: AGCTGGCCGTCTCTTCCTCATCCCGGCCACTATCCAGGACAAGTTAATCATCCGTTTCACTGTGACATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS CCA 72 bp CCAGGGATCCCTGGAAGAGACCCTCATGACCTTTGGTaGTTCTTCCCATGTCTCTGCATTGACCAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: PGIPGRDPHDLW*FFPCLCIDQRG
Trigger: TCCTCTTTGGTCAATGCAGAGACATGGGAAGAACCACCAAAGGTCATGAGGGTCTCTTCCAGGGATCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558761.5
ENST00000559190.5
CDS TCA 72 bp ATGGGAGCAGGTGGAGTCAGTTTGAAGAAGTGGGGCTaGAGGAGGCATCATTACCTCCGAATGGGAAAGTCT +
Preference number: 6 (lower is better)
Translates to: MGAGGVSLKKWG*RRHHYLRMGKS
Trigger: AGACTTTCCCATTCGGAGGTAATGATGCCTCCTTCAGCCCCACTTCTTCAAACTGACTCCACCTGCTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559816.1
CDS GCA 72 bp GTGGTGCAAGAAGTGCTCTGGAAGTCCCAGCATTTTTaGCAACCAGTCCATGACGTTCATCTCCAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: VVQEVLWKSQHF*QPVHDVHLQLC
Trigger: ACAGAGCTGGAGATGAACGTCATGGACTGGTTGGCAAAAATGCTGGGACTTCCAGAGCACTTCTTGCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000559683.1
CDS CAA 72 bp CCCTTTAGACGAAAAACCACCAGGCCAAGGTGCCTCTaGGCAGGAATTTCAAAGGAAGGGTCGTTTCTGACC +
Preference number: 6 (lower is better)
Translates to: PFRRKTTRPRCL*AGISKEGSFLT
Trigger: GGTCAGAAACGACCCTTCCTTTGAAATTCCTGCCAAGAGGCACCTTGGCCTGGTGGTTTTTCGTCTAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS CAA 72 bp GTAAACTGGGATGTCACAGTGAAACGGATGATTAACTaGTCCTGGATAGTGGCCGGGATGAGGAAGAGACGG +
Preference number: 6 (lower is better)
Translates to: VNWDVTVKRMIN*SWIVAGMRKRR
Trigger: CCGTCTCTTCCTCATCCCGGCCACTATCCAGGACAAGTTAATCATCCGTTTCACTGTGACATCCCAGTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS TCA 72 bp TTCCTCGATGGCCTTCTGAAGAGCTTCCCCTCGGAGTaGGAAGTTGTCATCCACAGGCAGAAATTTCATCTT +
Preference number: 6 (lower is better)
Translates to: FLDGLLKSFPSE*EVVIHRQKFHL
Trigger: AAGATGAAATTTCTGCCTGTGGATGACAACTTCTCACTCCGAGGGGAAGCTCTTCAGAAGGCCATCGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000558679.1
ENST00000558761.5
ENST00000559190.5
CDS CAA 90 bp CAATTAGGACCCTTTAGACGAAAAACCACCAGGCCAAGGTGCCTCTaGGCAGGAATTTCAAAGGAAGGGTCGTTTCTGACCAGAGATTCA +
Preference number: 6 (lower is better)
Translates to: QLGPFRRKTTRPRCL*AGISKEGSFLTRDS
Trigger: TGAATCTCTGGTCAGAAACGACCCTTCCTTTGAAATTCCTGCCAAGAGGCACCTTGGCCTGGTGGTTTTTCGTCTAAAGGGTCCTAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS TCA 72 bp TCCAAGTTCTATCATTCTAAGCTTAGGCATATATCCTaGCTTACAAAGACGGGCACCAAGCCCCGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SKFYHSKLRHIS*LTKTGTKPRCL
Trigger: CAAGCAGCGGGGCTTGGTGCCCGTCTTTGTAAGTCAGGATATATGCCTAAGCTTAGAATGATAGAACTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558679.1
CDS CAA 72 bp GAGGGAAGGTATCTCTCTTTCCTAGTGGTTTCTTGCTaGGGGATTAAACAGTCCCATCTGGGTTTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: EGRYLSFLVVSC*GIKQSHLGFLS
Trigger: AGAGAGGAAACCCAGATGGGACTGTTTAATCCCCAAGCAAGAAACCACTAGGAAAGAGAGATACCTTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558761.5
ENST00000559816.1
CDS GCA 72 bp TTAGAGGGAAGGTATCTCTCTTTCCTAGTGGTTTCTTaGTTGGGGATTAAACAGTCCCATCTGGGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: LEGRYLSFLVVS*LGIKQSHLGFL
Trigger: GAGGAAACCCAGATGGGACTGTTTAATCCCCAAGCAAGAAACCACTAGGAAAGAGAGATACCTTCCCTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558761.5
ENST00000559816.1
CDS CCA 72 bp TTCCAGTCTCTCAGGATGTCATCCCTAGTGGTAAACTaGGATGTCACAGTGAAACGGATGATTAACTTGTCC +
Preference number: 6 (lower is better)
Translates to: FQSLRMSSLVVN*DVTVKRMINLS
Trigger: GGACAAGTTAATCATCCGTTTCACTGTGACATCCCAGTTTACCACTAGGGATGACATCCTGAGAGACTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267845.8
ENST00000543581.5
ENST00000559816.1
CDS TCA 72 bp TATTTAGCCATTTCAGTACCATGTCTGACATGTGCTTaGAGATTCTTCACCCCGAAGGACCGAATCACGAAC +
Preference number: 6 (lower is better)
Translates to: YLAISVPCLTCA*RFFTPKDRITN
Trigger: GTTCGTGATTCGGTCCTTCGGGGTGAAGAATCTTCAAGCACATGTCAGACATGGTACTGAAATGGCTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267845.8
ENST00000559816.1
CDS TCA 72 bp AATTTATTCCATAACACACCTATGGATAGCACCTCATaGTGTGTAAAATACTGTATGGGAGGACCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: NLFHNTPMDSTS*CVKYCMGGPFC
Trigger: GCAGAAAGGTCCTCCCATACAGTATTTTACACATCATGAGGTGCTATCCATAGGTGTGTTATGGAATAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558679.1