Pregenerated sensors for HCST (Homo sapiens)
Ensembl gene IDs: ENSG00000126264Ensembl transcript IDs: ENST00000246551.9, ENST00000437550.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGAGGGGGCCTTGGATCCAGAAACAGTTCATGGGAGGGAGGCTTTaGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: LRGPWIQKQFMGGRL*ELWGSLRKNTTTGV Trigger: AACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCAAGGCCCCCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| 3UTR CCA 90 bp | CCTTGGATCCAGAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTaGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTTCAATTGTT | + |
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Preference number: 1 (lower is better) Translates to: PWIQKQFMGGRLWEL*GSLRKNTTTGVSIV Trigger: AACAATTGAAACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| 3UTR CAA 90 bp | TCTGAGGGGGCCTTGGATCCAGAAACAGTTCATGGGAGGGAGGCTTaGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: SEGALDPETVHGREA*GTLGFFEKEYDYRC Trigger: ACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCAAGGCCCCCTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTTCAACACACCATCCAGGATaGGAGGGTCAGAAGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: RLWELWGSLRKNTTTGVSTHHPG*EGQKSK Trigger: CTTTGACTTCTGACCCTCTCATCCTGGATGGTGTGT...TGAAACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTTCAATTTTACAATCCAAAAGTTaGGGCGGGGGTTCCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LWELWGSLRKNTTTGVSILQSKS*GGGSCA Trigger: GGCACAGGAACCCCCGCCCCAACTTTTGGATTGTAA...AATTGAAACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| 3UTR TCA 72 bp | GGCGGGGGTTCCTGTGCCACCACACACCATCCAGGATaGGAGGGTCAGAAGTCAAAGGTCCAAGCTGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: GGGSCATTHHPG*EGQKSKVQAAG Trigger: TCCTGCAGCTTGGACCTTTGACTTCTGACCCTCTCATCCTGGATGGTGTGTGGTGGCACAGGAACCCCCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000246551.9 ENST00000437550.2 |
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| 3UTR CCA 72 bp | CCTTGGATCCAGAAACAGTTCATGGGAGGGAGGCTTTaGGAACTCTGGGGTTCTTTGAGAAAGAATACGACT | + |
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Preference number: 3 (lower is better) Translates to: PWIQKQFMGGRL*ELWGSLRKNTT Trigger: AGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| 3UTR CCA 72 bp | CAGAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTaGGGTTCTTTGAGAAAGAATACGACTACAGGTGTT | + |
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Preference number: 3 (lower is better) Translates to: QKQFMGGRLWEL*GSLRKNTTTGV Trigger: AACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR GCA 90 bp | CTTGGATCCAGAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTGGGGTTCTTGCTGCGGCGTGGGCGTaGGCACAGGAACACCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LGSRNSSWEGGFGNSGVLAAAWA*AQEHRP Trigger: GGGGCGGTGTTCCTGTGCGCACGCCCACGCCGCAGC...AAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | GGGAGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTGGCGGGGCTGCGGCGTaGGCGTGCGCACAGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: GRLWELWGSLRKNTTTGVGGAAA*ACAQEH Trigger: GTGTTCCTGTGCGCACGCCCACGCCGCAGCCCCGCC...AACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR TCA 90 bp | GAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAAACACCGCCCCCACGATaGGCAGCGATGCCACCGCAT | + |
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Preference number: 4 (lower is better) Translates to: ETVHGREALGTLGFFEKETPPPR*AAMPPH Trigger: ATGCGGTGGCATCGCTGCTCATCGTGGGGGCGGTGT...TTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR GCA 90 bp | GAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAAAGCAGCCACGAGGCCTaGCAGGAGCGGCAGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: ETVHGREALGTLGFFEKESSHEA*QERQRE Trigger: CTCTCTCTGCCGCTCCTGGCAGGCCTCGTGGCTGCT...TTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR GCA 90 bp | AGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTTCACTTCTTGGGCGGGGCTaGGGCGTGGGCGTGCGCACA | + |
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Preference number: 4 (lower is better) Translates to: RLWELWGSLRKNTTTGVSLLGRG*GVGVRT Trigger: TGTGCGCACGCCCACGCCGCAGCCCCGCCCAAGAAG...TGAAACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | GGCCTTGGATCCAGAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTGGGGTTGGGTCAGCCCCTGCCTaGCATGTTGATGTAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: GLGSRNSSWEGGFGNSGVGSAPA*HVDVDF Trigger: AAAGTCTACATCAACATGCCAGGCAGGGGCTGACCC...AACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | GCCTTGGATCCAGAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTGGGGTTCTTACAATCCAAAAGTTaGGGCGGGGGTTCCTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: ALDPETVHGREALGTLGFLQSKS*GGGSCA Trigger: GGCACAGGAACCCCCGCCCCAACTTTTGGATTGTAA...GAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | GGTTCTGAGGGGGCCTTGGATCCAGAAACAGTTCATGGGAGGGAGGCTTTGGGATCCAGAAACAGTTCATaGGAGGGAGGCTTTGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GSEGALDPETVHGREALGSRNSS*EGGFGN Trigger: GTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGA...TCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCAAGGCCCCCTCAGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR TCA 90 bp | GCCTTGGATCCAGAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTGGGGTTCCCCTGCCTGGCATGTTaGTGTAGACTTTGCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: ALDPETVHGREALGTLGFPCLAC*CRLCHL Trigger: AAGATGGCAAAGTCTACATCAACATGCCAGGCAGGG...GAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR GCA 90 bp | CTTGGATCCAGAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTGGGGTTCTTTGGAGTCGTCTGAGCTaGAGCCACTGGGAGCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: LGSRNSSWEGGFGNSGVLWSRLS*SHWEQK Trigger: CTTTTGCTCCCAGTGGCTGCAGCTCAGACGACTCCA...AAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR GCA 90 bp | AGGGAGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTCACGATGAGCAGCGATaGCACCGCATCAGCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: REALGTLGFFEKEYDYRCHDEQR*HRISSH Trigger: GTGGCTGCTGATGCGGTGGCATCGCTGCTCATCGTG...ACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR GCA 90 bp | GAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAAGTCAAAGGTCCAAGCTaGAGGAGGGTCAGCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ETVHGREALGTLGFFEKEVKGPS*RRVSPC Trigger: GCAGGGGCTGACCCTCCTGCAGCTTGGACCTTTGAC...TTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR TCA 90 bp | CTTGGATCCAGAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTGGGGTTCTTAGCAGGAAGAGGATGTaGCCCAGATGGATCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGSRNSSWEGGFGNSGVLSRKRM*PRWIMV Trigger: CACCATGATCCATCTGGGTCACATCCTCTTCCTGCT...AAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | AGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTTCAGGTCTGGCAGGGGTCTaGCAGAGGACTGTGGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RLWELWGSLRKNTTTGVSGLAGV*QRTVVQ Trigger: CTGGACCACAGTCCTCTGCCAGACCCCTGCCAGACC...TGAAACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | GAGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTTCCCAGATGGATCATGGTaGACTGGGGTCTGGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: EALGTLGFFEKEYDYRCFPDGSW*TGVWQG Trigger: CCCCTGCCAGACCCCAGTCCACCATGATCCATCTGG...GAAACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | GAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAAGACCCAGATGGATCATaGTGGACTGGGGTCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ETVHGREALGTLGFFEKEDPDGS*WTGVWQ Trigger: CTGCCAGACCCCAGTCCACCATGATCCATCTGGGTC...TTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | AGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTTCAACTTTGCCATCTTCTTaGGCGGGGCTGCGGCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RLWELWGSLRKNTTTGVSTLPSS*AGLRRG Trigger: CCCACGCCGCAGCCCCGCCCAAGAAGATGGCAAAGT...TGAAACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | AGGGAGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTCTGGCAGAGGACTGTaGTCCAGAGAAGTCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: REALGTLGFFEKEYDYRCSGRGL*SREVQR Trigger: CCTCTGGACTTCTCTGGACCACAGTCCTCTGCCAGA...ACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | GGGAGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTCTGAGCTGCAGCCACTaGGAGCAAAAGCAGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GRLWELWGSLRKNTTTGVLSCSH*EQKQEE Trigger: CTCTTCCTGCTTTTGCTCCCAGTGGCTGCAGCTCAG...AACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR TCA 90 bp | GGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTTCAATTGTTTTTCTCCTGGAGTCGTCTaGGCTGCAGCCACTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GTLGFFEKEYDYRCFNCFSPGVV*AAATGS Trigger: GCTCCCAGTGGCTGCAGCTCAGACGACTCCAGGAGA...AAAACAATTGAAACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR TCA 90 bp | AGGGAGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTACACACCATCCAGGATaGGAGGGTCAGAAGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: REALGTLGFFEKEYDYRCTHHPG*EGQKSK Trigger: CTTTGACTTCTGACCCTCTCATCCTGGATGGTGTGT...ACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | GGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTTCAATTGTTTTTGGTGGACTGGGGTCTaGCAGGGGTCTGGCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: GTLGFFEKEYDYRCFNCFWWTGV*QGSGRG Trigger: TCCTCTGCCAGACCCCTGCCAGACCCCAGTCCACCA...AAAACAATTGAAACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | GGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTTCAATTGTTTTTGGATCATGGTGGACTaGGGTCTGGCAGGGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GTLGFFEKEYDYRCFNCFWIMVD*GLAGVW Trigger: CCAGACCCCTGCCAGACCCCAGTCCACCATGATCCA...AAAACAATTGAAACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR TCA 90 bp | TTGGATCCAGAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTGGGGTTCTTTAACTCTGGGGTTCTTTaGGAAAGAATACGACTACAG | + |
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Preference number: 4 (lower is better) Translates to: LDPETVHGREALGTLGFFNSGVL*ERIRLQ Trigger: CTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTT...AAAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CCA 90 bp | AGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTTCAAGGCTTTGGGAACTCTaGGGTTCTTTGAGAAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: RLWELWGSLRKNTTTGVSRLWEL*GSLRKN Trigger: ATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCT...TGAAACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS TCA 90 bp | CGGGGCTGCGGCGTGGGCGTGCGCACAGGAACACCGCCCCCACGATaGGCAGCGATGCCACCGCATCAGCAGCCACGAGGCCTGCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RGCGVGVRTGTPPPR*AAMPPHQQPRGLPG Trigger: TCCTGGCAGGCCTCGTGGCTGCTGATGCGGTGGCATCGCTGCTCATCGTGGGGGCGGTGTTCCTGTGCGCACGCCCACGCCGCAGCCCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000246551.9 ENST00000437550.2 |
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| CDS GCA 90 bp | GCGTGGGCGTGCGCACAGGAACACCGCCCCCACGATGAGCAGCGATaGCACCGCATCAGCAGCCACGAGGCCTGCCAGGAGCGGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: AWACAQEHRPHDEQR*HRISSHEACQERQR Trigger: TCTCTGCCGCTCCTGGCAGGCCTCGTGGCTGCTGATGCGGTGGCATCGCTGCTCATCGTGGGGGCGGTGTTCCTGTGCGCACGCCCACGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000246551.9 ENST00000437550.2 |
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| CDS GCA 90 bp | GTTGATGTAGACTTTGCCATCTTGGGCGGGGCTGCGGCGTGGGCGTaGGCACAGGAACACCGCCCCCACGATGAGCAGCGATGCCACCGC | + |
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Preference number: 5 (lower is better) Translates to: VDVDFAILGGAAAWA*AQEHRPHDEQRCHR Trigger: GCGGTGGCATCGCTGCTCATCGTGGGGGCGGTGTTCCTGTGCGCACGCCCACGCCGCAGCCCCGCCCAAGATGGCAAAGTCTACATCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437550.2 |
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| CDS CCA 90 bp | GGTCAGAAGTCAAAGGTCCAAGCTGCAGGAGGGTCAGCCCCTGCCTaGCATGTTGATGTAGACTTTGCCATCTTGGGCGGGGCTGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: GQKSKVQAAGGSAPA*HVDVDFAILGGAAA Trigger: CGCCGCAGCCCCGCCCAAGATGGCAAAGTCTACATCAACATGCCAGGCAGGGGCTGACCCTCCTGCAGCTTGGACCTTTGACTTCTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437550.2 |
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| CDS CCA 90 bp | GGTCAGAAGTCAAAGGTCCAAGCTGCAGGAGGGTCAGCCCCTGCCTaGCATGTTGATGTAGACTTTGCCATCTTCTTGGGCGGGGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: GQKSKVQAAGGSAPA*HVDVDFAIFLGGAA Trigger: CGCAGCCCCGCCCAAGAAGATGGCAAAGTCTACATCAACATGCCAGGCAGGGGCTGACCCTCCTGCAGCTTGGACCTTTGACTTCTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CAA 90 bp | TGGATCCAGAAACAGTTCATGGGAGGGAGGCTTTGGGAACTCTGGGGTTCTTTGGACTTTGCCATCTTCTaGGGCGGGGCTGCGGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: WIQKQFMGGRLWELWGSLDFAIF*GGAAAW Trigger: CCACGCCGCAGCCCCGCCCAAGAAGATGGCAAAGTC...CAAAGAACCCCAGAGTTCCCAAAGCCTCCCTCCCATGAACTGTTTCTGGATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CAA 90 bp | GGGAGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTGGTTCTGAGGGGGCCTaGGATCCAGAAACAGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GRLWELWGSLRKNTTTGVGSEGA*DPETVH Trigger: ATGAACTGTTTCTGGATCCAAGGCCCCCTCAGAACC...AACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS-3UTR CAA 90 bp | AGGCTTTGGGAACTCTGGGGTTCTTTGAGAAAGAATACGACTACAGGTGTTTCAGAACTCTGGGGTTCTTaGAGAAAGAATACGACTACA | + |
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Preference number: 5 (lower is better) Translates to: RLWELWGSLRKNTTTGVSELWGS*RKNTTT Trigger: TGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTC...TGAAACACCTGTAGTCGTATTCTTTCTCAAAGAACCCCAGAGTTCCCAAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS TCA 72 bp | GGCGTGGGCGTGCGCACAGGAACACCGCCCCCACGATaGGCAGCGATGCCACCGCATCAGCAGCCACGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GVGVRTGTPPPR*AAMPPHQQPRG Trigger: GCCTCGTGGCTGCTGATGCGGTGGCATCGCTGCTCATCGTGGGGGCGGTGTTCCTGTGCGCACGCCCACGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000246551.9 ENST00000437550.2 |
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| CDS GCA 72 bp | TGCGCACAGGAACACCGCCCCCACGATGAGCAGCGATaGCACCGCATCAGCAGCCACGAGGCCTGCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: CAQEHRPHDEQR*HRISSHEACQE Trigger: CTCCTGGCAGGCCTCGTGGCTGCTGATGCGGTGGCATCGCTGCTCATCGTGGGGGCGGTGTTCCTGTGCGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000246551.9 ENST00000437550.2 |
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| CDS CCA 72 bp | GTAGACTTTGCCATCTTCTTGGGCGGGGCTGCGGCGTaGGCGTGCGCACAGGAACACCGCCCCCACGATGAG | + |
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Preference number: 6 (lower is better) Translates to: VDFAIFLGGAAA*ACAQEHRPHDE Trigger: CTCATCGTGGGGGCGGTGTTCCTGTGCGCACGCCCACGCCGCAGCCCCGCCCAAGAAGATGGCAAAGTCTAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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| CDS CCA 72 bp | GATGTAGACTTTGCCATCTTGGGCGGGGCTGCGGCGTaGGCGTGCGCACAGGAACACCGCCCCCACGATGAG | + |
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Preference number: 6 (lower is better) Translates to: DVDFAILGGAAA*ACAQEHRPHDE Trigger: CTCATCGTGGGGGCGGTGTTCCTGTGCGCACGCCCACGCCGCAGCCCCGCCCAAGATGGCAAAGTCTACATC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437550.2 |
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| CDS CCA 72 bp | AAAGCAGGAAGAGGATGTGACCCAGATGGATCATGGTaGACTGGGGTCTGGCAGGGGTCTGGCAGAGGACTG | + |
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Preference number: 6 (lower is better) Translates to: KAGRGCDPDGSW*TGVWQGSGRGL Trigger: CAGTCCTCTGCCAGACCCCTGCCAGACCCCAGTCCACCATGATCCATCTGGGTCACATCCTCTTCCTGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000246551.9 ENST00000437550.2 |
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| CDS CCA 72 bp | TCAAAGGTCCAAGCTGCAGGAGGGTCAGCCCCTGCCTaGCATGTTGATGTAGACTTTGCCATCTTCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SKVQAAGGSAPA*HVDVDFAIFLG Trigger: GCCCAAGAAGATGGCAAAGTCTACATCAACATGCCAGGCAGGGGCTGACCCTCCTGCAGCTTGGACCTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246551.9 |
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