RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HCFC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000172534

Ensembl transcript IDs: ENST00000310441.12, ENST00000369984.4, ENST00000444191.5, ENST00000461098.1

Found 1008 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCTGCGGAAACCAGCAGCCCTGTTTGGGAGGCGGTGCCGGTGGTaGTCAGGGAGGGGGCATGGGGAGAGCTGGAAATCCAGGACAAGG +
Preference number: 1 (lower is better)
Translates to: WLRKPAALFGRRCRW*SGRGHGESWKSRTR
Trigger: CCTTGTCCTGGATTTCCAGCTCTCCCCATGCCCCCTCCCTGAGCACCACCGGCACCGCCTCCCAAACAGGGCTGCTGGTTTCCGCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR CCA 90 bp CAGTGGCTGCGGAAACCAGCAGCCCTGTTTGGGAGGCGGTGCCGGTaGTGCTCAGGGAGGGGGCATGGGGAGAGCTGGAAATCCAGGACA +
Preference number: 1 (lower is better)
Translates to: QWLRKPAALFGRRCR*CSGRGHGESWKSRT
Trigger: TGTCCTGGATTTCCAGCTCTCCCCATGCCCCCTCCCTGAGCACCACCGGCACCGCCTCCCAAACAGGGCTGCTGGTTTCCGCAGCCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR GCA 90 bp GGAGGAAAGGAAGCGCGCTCCTCTCTCTGCTTTCCCATCTGCCTCTaGTTCCTCCCAACAGCAATGGTAAAATGTGCTTTCTTTAGATTA +
Preference number: 1 (lower is better)
Translates to: GGKEARSSLCFPICL*FLPTAMVKCAFFRL
Trigger: TAATCTAAAGAAAGCACATTTTACCATTGCTGTTGGGAGGAAGCAGAGGCAGATGGGAAAGCAGAGAGAGGAGCGCGCTTCCTTTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAACGGGGTGGGAGGGGTaGGCCCTGGCGGGTGTTCCT +
Preference number: 2 (lower is better)
Translates to: GTPFLPSMPAPDLALRNATGWEG*ALAGVP
Trigger: AGGAACACCCGCCAGGGCCCACCCCTCCCACCCCGT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCACGGGGTGGGAGGGGTaGGCCCTGGCGGGTGTTCCT +
Preference number: 2 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGTGWEG*ALAGVP
Trigger: AGGAACACCCGCCAGGGCCCACCCCTCCCACCCCGT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAATGCTGGGACGGGGTaGGAGGGGTGGGCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: GTPFLPSMPAPDLALRNANAGTG*EGWALA
Trigger: CGCCAGGGCCCACCCCTCCCACCCCGTCCCAGCATT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGCGGCTCGCGAGGGTaGAGTGCGAATGCTGGGACG +
Preference number: 2 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSGSRG*SANAGT
Trigger: CGTCCCAGCATTCGCACTTCACCCTCGCGAGCCGCT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGGAGGGGTGGGCCCTaGCGGGTGTTCCTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGRGGP*RVFLKQ
Trigger: CTGCTTCAGGAACACCCGCCAGGGCCCACCCCTCCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGGAGGGGTGGGCCCTaGCGGGTGTTCCTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGRGGP*RVFLKQ
Trigger: CTGCTTCAGGAACACCCGCCAGGGCCCACCCCTCCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCAGCGGCTCGCGAGGGTaGAGTGCGAATGCTGGGACG +
Preference number: 2 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSGSRG*SANAGT
Trigger: CGTCCCAGCATTCGCACTTCACCCTCGCGAGCCGCT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGAAAGGGGAGAGGAGTaGACAGCGGCTCGCGAGGGT +
Preference number: 2 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGERGEE*TAAREG
Trigger: ACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGGGTGAAGTGCGAATaGTGGGACGGGGTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRVKCE*WDGVGG
Trigger: CCCTCCCACCCCGTCCCAGCATTCGCACTTCACCCT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTCGCGAGGGTGAAGTaGGAATGCTGGGACGGGGTG +
Preference number: 2 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLARVK*ECWDGV
Trigger: CACCCCGTCCCAGCATTCGCACTTCACCCTCGCGAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGTGAAGTGCGAATGCTaGGACGGGGTGGGAGGGGTG +
Preference number: 2 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGVKCEC*DGVGGV
Trigger: CACCCCTCCCACCCCGTCCCAGCATTCGCACTTCAC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGGAACGCACAGCCTTaGGAGGGCGGAGCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRNAQP*EGGAGC
Trigger: ACAGCCAGCTCCGCCCTCCCAAGGCTGTGCGTTCCT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGAAAGGGGAGAGGAGTaGACAGCGGCTCGCGAGGGT +
Preference number: 2 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAERGEE*TAAREG
Trigger: ACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGGGTGAAGTGCGAATaGTGGGACGGGGTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARVKCE*WDGVGG
Trigger: CCCTCCCACCCCGTCCCAGCATTCGCACTTCACCCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTCGCGAGGGTGAAGTaGGAATGCTGGGACGGGGTG +
Preference number: 2 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALARVK*ECWDGV
Trigger: CACCCCGTCCCAGCATTCGCACTTCACCCTCGCGAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
3UTR-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGTGAAGTGCGAATGCTaGGACGGGGTGGGAGGGGTG +
Preference number: 2 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGVKCEC*DGVGGV
Trigger: CACCCCTCCCACCCCGTCCCAGCATTCGCACTTCAC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCTCGCCGGTGCCCATaGCGGCCTGCTGCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGARRCP*RPAARP
Trigger: AGGCCGCGCAGCAGGCCGTCATGGGCACCGGCGAGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACGCCGGTGCCTGCCATaGCGGCCTGCTGCGCGGCCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARRCLP*RPAARP
Trigger: AGGCCGCGCAGCAGGCCGTCATGGCAGGCACCGGCG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCCATGACGGCCTGCTaGGCGGCCTGGAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAMTAC*AAWSTA
Trigger: GGCGGTGCTCCAGGCCGCGCAGCAGGCCGTCATGGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGCGCGGTGCCAGCCTaGGGGGTGACGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSAVPA*GVTLGA
Trigger: GGCACCCAGCGTCACCCCCCAGGCTGGCACCGCGCT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCCTGCTGCGCGGCCTaGAGCACCGCCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGACCAA*STAWMA
Trigger: GGCCATCCAGGCGGTGCTCCAGGCCGCGCAGCAGGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCGCAGTACACCCGCATaGAGGCCAGCTGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRSTPA*RPAGPG
Trigger: CCCCGGCCCAGCTGGCCTTCATGCGGGTGTACTGCG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCAGTGCGGAGGATGGTaGCTGGCTGTCCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGQCGGW*LAVPGP
Trigger: GGGCCCCGGGACAGCCAGGCACCATCCTCCGCACTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCACAAAAGCAGGGCTaGGGCCCCCGGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAQKQG*GPRAPV
Trigger: CACGGGAGCCCGGGGGCCGCAGCCCTGCTTTTGTGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGACCAGCAGGGGGCTaGTGCCCACCCTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRPAGG*CPPSGW
Trigger: CCAGCCCGAGGGTGGGCAGCAGCCCCCTGCTGGTCG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGCCGTGGCGGCAGCTaGTGGCGAGGACCTGGCGAC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGCRGGS*WRGPGD
Trigger: GTCGCCAGGTCCTCGCCAGCAGCTGCCGCCACGGCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCCATGACGGCCTGCTaGGCGGCCTGGAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPMTAC*AAWSTA
Trigger: GGCGGTGCTCCAGGCCGCGCAGCAGGCCGTCATGGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCCATGACGGCCTGCTaGGCGGCCTGGAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAAMTAC*AAWSTA
Trigger: GGCGGTGCTCCAGGCCGCGCAGCAGGCCGTCATGGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTCCCCCGCCGGAAATaGCGGAGCCCCGGCCCGGTT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLPRRK*RSPGPV
Trigger: AACCGGGCCGGGGCTCCGCCATTTCCGGCGGGGGAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGGGGATCTTCTGGGTaGCAGCGGCCGCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGGSSG*QRPQRP
Trigger: TGGCCGCTGCGGCCGCTGCCACCCAGAAGATCCCCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCGGTGCTGACCGCATaGCTGTGGCGCCCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAVLTA*LWRPAG
Trigger: TCCTGCGGGGCGCCACAGCCATGCGGTCAGCACCGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGCGCGGTGCCAGCCTaGGGGGTGACGCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASAVPA*GVTLGA
Trigger: GGCACCCAGCGTCACCCCCCAGGCTGGCACCGCGCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCGTGGCGGCAGCTGCTaGCGAGGACCTGGCGACACC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRGGSC*RGPGDT
Trigger: GGTGTCGCCAGGTCCTCGCCAGCAGCTGCCGCCACG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCCTGGAGCACCGCCTaGATGGCCAGGGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAWSTA*MARAWA
Trigger: AGCCCAGGCCCTGGCCATCCAGGCGGTGCTCCAGGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCAGCGCCACAGTGCTaGGGACCGTGCCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAAPQC*GPCRPA
Trigger: AGCTGGCCGGCACGGTCCCCAGCACTGTGGCGCTGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGGAGCCGCCATCTTaGGACCGTCCCGCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWEPPS*DRPASP
Trigger: CGGGGAAGCGGGACGGTCTCAAGATGGCGGCTCCCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGAAGCTGGAGGCCGCTaGGTCCCGTCGCCCCGACTA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGEAGGR*VPSPRL
Trigger: TAGTCGGGGCGACGGGACTCAGCGGCCTCCAGCTTC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGCCCCAGCTCCGCCTaGGTCACGGTTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGCPSSA*VTVAAA
Trigger: GGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCGGGGTGGAGCTCTTaGGCTCGCCCCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPGWSS*ARPQPV
Trigger: CACAGGCTGGGGGCGAGCTCAAGAGCTCCACCCCGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGCTCAGGCTGCGCCTaGCGCCGTGGGAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGCSGCA*RRGSRH
Trigger: ATGGCGGCTCCCACGGCGGCAGGCGCAGCCTGAGCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTCTGCTGCTCAGGCTaGGCCTGCCGCCGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLCCSG*ACRRGS
Trigger: GCTCCCACGGCGGCAGGCGCAGCCTGAGCAGCAGAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGCAGGGGTGCCAGCTaGACAGGCCCGACGGGCATC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGRGAS*TGPTGI
Trigger: GATGCCCGTCGGGCCTGTGCAGCTGGCACCCCTGCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGATCACGGCAGGGGTaGCAGCTGCACAGGCCCGAC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGSRQG*QLHRPD
Trigger: GTCGGGCCTGTGCAGCTGGCACCCCTGCCGTGATCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCACAAAAGCAGGGCTaGGGCCCCCGGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAQKQG*GPRAPV
Trigger: CACGGGAGCCCGGGGGCCGCAGCCCTGCTTTTGTGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCTCTCGCACACAGGTaGCATGCGGGGCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGALAHR*HAGLPS
Trigger: GCTGGGGAGCCCCGCATGGCACCTGTGTGCGAGAGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGCCGTGGCGGCAGCTaGTGGCGAGGACCTGGCGAC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNACRGGS*WRGPGD
Trigger: GTCGCCAGGTCCTCGCCAGCAGCTGCCGCCACGGCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCCGACTGCAGAAGCTaGCGTGGCGGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGADCRS*RGGSCW
Trigger: CCAGCAGCTGCCGCCACGGCAGCTTCTGCAGTCGGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCCTCCTGCAGCTGCTaGTGCTGCACCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGASCSC*CCTRAA
Trigger: GGCTGCCCTGGTGCAGCAGCAGCAGCTGCAGGAGGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCAGCAGCGCCACAGTaGTGGGGACCGTGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAAAAPQ*WGPCRP
Trigger: TGGCCGGCACGGTCCCCAGCACTGTGGCGCTGCTGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCAGCAGCGCCACAGTaGTGGGGACCGTGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAAAPQ*WGPCRP
Trigger: TGGCCGGCACGGTCCCCAGCACTGTGGCGCTGCTGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCTGCCATGACGGCCTaGTGCGCGGCCTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPAMTA*CAAWST
Trigger: GGTGCTCCAGGCCGCGCAGCAGGCCGTCATGGCAGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTCTCGAGGGCCGTTTaGGGGCTCGCGCCGTACGGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALSRAV*GLAPYG
Trigger: GCCGTACGGCGCGAGCCCCCAAACGGCCCTCGAGAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCAAGTCCCCAGCACTaGCCGGCTTCCGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPSPQH*PASGAG
Trigger: ACCCGCCCCGGAAGCCGGCCAGTGCTGGGGACTTGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAATGGCGACTGCGCAGTaGCCAGCCCGAGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAMATAQ*PARARG
Trigger: CCCCCGTGCTCGGGCTGGCCACTGCGCAGTCGCCAT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGTGCGGGGGCAGCCTaGGGCAGGAGCGTGATGCCT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGAGAA*GRSVMP
Trigger: AGGCATCACGCTCCTGCCCCAGGCTGCCCCCGCACC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCTGGATGGTGGTGGTaGTCGGGGGTGCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPGWWW*SGVRGQ
Trigger: CTGCCCCCGCACCCCCGACCACCACCACCATCCAGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCTGGATGGTGGTGGTaGTCGGGGGTGCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPGWWW*SGVRGQ
Trigger: CTGCCCCCGCACCCCCGACCACCACCACCATCCAGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCACAGTGCGGAGGATaGTGCCTGGCTGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAQCGG*CLAVPG
Trigger: CCCCGGGACAGCCAGGCACCATCCTCCGCACTGTGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCGCCCCGGCAAGGCTaGTGGAGACGGTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGPPRQG*WRRCLS
Trigger: TGACAGGCACCGTCTCCACCAGCCTTGCCGGGGCGG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCTGCCCGGCCATGTTaGAGGTGGCGGTGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAARPC*RWRWWR
Trigger: CCGCCACCACCGCCACCTCCAACATGGCCGGGCAGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCGGTGCTGACCGCATaGCTGTGGCGCCCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAVLTA*LWRPAG
Trigger: TCCTGCGGGGCGCCACAGCCATGCGGTCAGCACCGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGTGGCGGCAGCTGCTaGCGAGGACCTGGCGACACC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRGGSC*RGPGDT
Trigger: GGTGTCGCCAGGTCCTCGCCAGCAGCTGCCGCCACG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTGCAGAAGCTGCCGTaGCGGCAGCTGCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLQKLP*RQLLAR
Trigger: CCTCGCCAGCAGCTGCCGCCACGGCAGCTTCTGCAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGATGGCCAGGGCCTaGGCTTCCTCCGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWMARA*ASSVAA
Trigger: CGCAGCCACGGAGGAAGCCCAGGCCCTGGCCATCCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCCTGGAGCACCGCCTaGATGGCCAGGGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAWSTA*MARAWA
Trigger: AGCCCAGGCCCTGGCCATCCAGGCGGTGCTCCAGGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCCTGGAGCACCGCCTaGATGGCCAGGGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAAWSTA*MARAWA
Trigger: AGCCCAGGCCCTGGCCATCCAGGCGGTGCTCCAGGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGCTGCTGCTGGGCCTaGGCCTCCTGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGCCCWA*ASCSCC
Trigger: GCAGCAGCTGCAGGAGGCCCAGGCCCAGCAGCAGCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCAGCGCCACAGTGCTaGGGACCGTGCCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAAAPQC*GPCRPA
Trigger: AGCTGGCCGGCACGGTCCCCAGCACTGTGGCGCTGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCAGGCAGGAGGGGCTaGGCCCGCAGTACACCCGCA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPGRRG*ARSTPA
Trigger: TGCGGGTGTACTGCGGGCCCAGCCCCTCCTGCCTGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCAGGCAGGAGGGGCTaGGCCCGCAGTACACCCGCA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPGRRG*ARSTPA
Trigger: TGCGGGTGTACTGCGGGCCCAGCCCCTCCTGCCTGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGGAGGGGTGGGCCCTaGCGGGTGTTCCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGRGGP*RVFLKQ
Trigger: CTGCTTCAGGAACACCCGCCAGGGCCCACCCCTCCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCGGAGGTGTCCATaGGCTCGCCGGTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGPRRCP*ARRCLP
Trigger: TGGCAGGCACCGGCGAGCCCATGGACACCTCCGAGG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCGCCGTACGGCTTGTaGAGTCTCGCGCCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAPYGL*SLAPLP
Trigger: GGGGAGAGGCGCGAGACTTCACAAGCCGTACGGCGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGGAGCCGCCATCTTaGGCCGCCTCTCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWEPPS*AASLSS
Trigger: GGAGGAGAGAGAGGCGGCTCAAGATGGCGGCTCCCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGGGGAGACGCTGCTaGTGCCCAGGATGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWGRRC*CPGWWA
Trigger: AGCCCACCATCCTGGGCATCAGCAGCGTCTCCCCCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGTGCCCAAGGTGGTaGTGGGCGTGGCCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWCPRW*WAWPGK
Trigger: CTTCCCTGGCCACGCCCATCACCACCTTGGGCACCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTCGCAGGGTGGGTTTaGGCAGCCATGCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLAGWV*AAMLPG
Trigger: GCCGGGCAGCATGGCTGCTCAAACCCACCCTGCGAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTCGCAGGGTGGGTTTaGGCAGCCATGCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALAGWV*AAMLPG
Trigger: GCCGGGCAGCATGGCTGCTCAAACCCACCCTGCGAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTCATGGCAGCGGTGCTaGCCGCATGGCTGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSWQRC*PHGCGA
Trigger: GGCGCCACAGCCATGCGGTCAGCACCGCTGCCATGA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCAGGGCACCCACGCTaGCCGACATGGTGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAAGHPR*PTWWCQ
Trigger: CTGGCACCACCATGTCGGTCAGCGTGGGTGCCCTGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCAGGGCACCCACGCTaGCCGACATGGTGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAGHPR*PTWWCQ
Trigger: CTGGCACCACCATGTCGGTCAGCGTGGGTGCCCTGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGGGGTCTGGGAGGCTaGCAGGACCTCGGCGGACTC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARGLGG*QDLGGL
Trigger: GAGTCCGCCGAGGTCCTGTCAGCCTCCCAGACCCCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGCCCCAGCTCCGCCTaGGTCACGGTTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGCPSSA*VTVAAA
Trigger: GGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCTCTCAGTGGCCGTTaGGGGCAGCAGCGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGALSGR*GQQRHS
Trigger: ACTGTGGCGCTGCTGCCCTCAACGGCCACTGAGAGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGGGTGGCTCCCAGGTaGGGTGAGCACCATCCGGAC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRVAPR*GEHHPD
Trigger: GTCCGGATGGTGCTCACCTCACCTGGGAGCCACCCT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTCGCCCCCAGCCTGTaGGCTCTGGATGGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLAPSL*ALDGQV
Trigger: TACCTGGCCATCCAGAGCTCACAGGCTGGGGGCGAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCGCTTCCAGCGGGGCTaGAGAAGCACCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRFQRG*RSTAGK
Trigger: CTTGCCAGCGGTGCTTCTGCAGCCCCGCTGGAAGCG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGCAGGTGCGGCTGCTaGTGGGGCAGGGCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASRCGC*WGRALG
Trigger: CCCAAGAGCCCTGCCCCAGCAGCAGCCGCACCTGCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGCCGCAGCGGCCAGTaGGGCCATCCCACTCATCTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGRSGQ*GHPTHL
Trigger: CAGATGAGTGGGATGGCCGCACTGGCCGCTGCGGCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCACCTGGGTCACTCCCTaGTGCCCGTGGCCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGTWVTP*CPWPVA
Trigger: TGCCACTGGCCACGGGCAGCAGGGAGTGACCCAGGT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCCCCATGGGCACAGTaGGGAGGATGGTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGPPWAQ*GGWCLA
Trigger: AGCCAGGCACCATCCTCCGCACTGTGCCCATGGGGG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGTTGTGAGCCCGCCTaGCGCTGTCAGCGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGCEPA*RCQRGL
Trigger: CAGACCACGCTGACAGCGGCAGGCGGGCTCACAACC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCTCTCGCACACAGGTaGCATGCGGGGCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAALAHR*HAGLPS
Trigger: GCTGGGGAGCCCCGCATGGCACCTGTGTGCGAGAGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGGACCGGTGTGGACTaGGTCACGGTGGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGTGVD*VTVVTA
Trigger: GGCTGTGACCACCGTGACGCAGTCCACACCGGTCCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCCGACTGCAGAAGCTaGCGTGGCGGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGADCRS*RGGSCW
Trigger: CCAGCAGCTGCCGCCACGGCAGCTTCTGCAGTCGGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCTGTGGAAGCCGACTaGAGAAGCTGCCGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAVEAD*RSCRGG
Trigger: GCCGCCACGGCAGCTTCTGCAGTCGGCTTCCACAGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCATGGCTCCCCTGTGCTaGTCAGATCCACGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGMAPLC*SDPRRP
Trigger: CGGCCGCCGTGGATCTGAGCAGCACAGGGGAGCCAT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCCTCCTGCAGCTGCTaGTGCTGCACCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAASCSC*CCTRAA
Trigger: GGCTGCCCTGGTGCAGCAGCAGCAGCTGCAGGAGGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGGCCTCCTGCAGCTaGTGCTGCTGCACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWASCS*CCCTRA
Trigger: TGCCCTGGTGCAGCAGCAGCAGCTGCAGGAGGCCCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTTTCCTCCCCTCCATaGCTGCCCCCGACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLSSPP*LPPTWP
Trigger: GGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGCTTCCGGGGCGGGTaGAAAGGAGCCACAAGCGCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGFRGG*KGATSA
Trigger: GGCGCTTGTGGCTCCTTTCCACCCGCCCCGGAAGCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCACCGCTGGCAAGTTaGCGGGCGACACGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAPLAS*RATRPK
Trigger: CTTCGGCCGTGTCGCCCGCCAACTTGCCAGCGGTGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTGGGGCAGGGCTCTTaGGAGGGTTGGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLGQGS*EGWQAQ
Trigger: CTGTGCCTGCCAACCCTCCCAAGAGCCCTGCCCCAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGGTGCGGCTGCTGCTaGGGCAGGGCTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARCGCC*GRALGR
Trigger: CCTCCCAAGAGCCCTGCCCCAGCAGCAGCCGCACCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCAAGACCTGGATGGTaGTGGTGGTCGGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGARPGW*WWSGVR
Trigger: CCGCACCCCCGACCACCACCACCATCCAGGTCTTGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCACAGTGCGGAGGATaGTGCCTGGCTGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAQCGG*CLAVPG
Trigger: CCCCGGGACAGCCAGGCACCATCCTCCGCACTGTGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCGGCCATGTTGGAGGTaGCGGTGGTGGCGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRPCWR*RWWRCW
Trigger: CCAACACCGCCACCACCGCCACCTCCAACATGGCCG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACGGGCATCTCGCTGGTaGTTGGCGCCGACGCTCGAC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARASRW*LAPTLD
Trigger: GTCGAGCGTCGGCGCCAACCACCAGCGAGATGCCCG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGGGCATCTCGCTGGTaGTTGGCGCCGACGCTCGAC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRASRW*LAPTLD
Trigger: GTCGAGCGTCGGCGCCAACCACCAGCGAGATGCCCG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGACGGGCATCTCGCTaGTGGTTGGCGCCGACGCTC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRRASR*WLAPTL
Trigger: GAGCGTCGGCGCCAACCACCAGCGAGATGCCCGTCG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGGACTTAGAGCCCTaGGCTGCCTCCAGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWDLEP*AASSAP
Trigger: TGGGGCGCTGGAGGCAGCCCAGGGCTCTAAGTCCCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTGACCGCATGGCTGTaGCGCCCCGCAGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALTAWL*RPAGRS
Trigger: GGACCTTCCTGCGGGGCGCCACAGCCATGCGGTCAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTGACCGCATGGCTGTaGCGCCCCGCAGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLTAWL*RPAGRS
Trigger: GGACCTTCCTGCGGGGCGCCACAGCCATGCGGTCAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCCCAGCACCCACGCTaGAACGGGTCATGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPQHPR*NGSWQR
Trigger: CCGCTGCCATGACCCGTTCCAGCGTGGGTGCTGGGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTGGGCGAGCCACCCTaGAGGCTCTCGCACACAGGT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLGEPP*RLSHTG
Trigger: ACCTGTGTGCGAGAGCCTCCAGGGTGGCTCGCCCAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGGTTGGAGCAGACTTaGGTCACGGTGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGLEQT*VTVAEG
Trigger: CCCCTCGGCCACCGTGACCCAAGTCTGCTCCAACCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGCCCACCCTCGGGCTaGCCCGTGCCCCCGTTTGAA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNACPPSG*PVPPFE
Trigger: TTCAAACGGGGGCACGGGCCAGCCCGAGGGTGGGCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGCCCGGGACCGGTGTaGACTGCGTCACGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGPGPV*TASRWS
Trigger: TGACCACCGTGACGCAGTCCACACCGGTCCCGGGCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACACCTGGAGTTCCTCTaGGGGCGGCACAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAHLEFL*GRHRGA
Trigger: GGCCCCTCTGTGCCGCCCCCAGAGGAACTCCAGGTG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGACCTGGCGACACCTaGAGTTCCTCTGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGPGDT*SSSGGG
Trigger: GCCGCCCCCAGAGGAACTCCAGGTGTCGCCAGGTCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTGCAGAAGCTGCCGTaGCGGCAGCTGCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLQKLP*RQLLAR
Trigger: CCTCGCCAGCAGCTGCCGCCACGGCAGCTTCTGCAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGAGCCGGCAGACTCCTaGCCCGAAGATGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGEPADS*PEDGSP
Trigger: AGGGGAGCCATCTTCGGGCCAGGAGTCTGCCGGCTC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCTGGACCACCACAGTaGCCACCACCGCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAGPPQ*PPPQSR
Trigger: CCGGCTCTGCGGTGGTGGCCACTGTGGTGGTCCAGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTGTGTGGGTGGGGGTaGCTGGACCACCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLCGWG*LDHHSG
Trigger: GCCACTGTGGTGGTCCAGCCACCCCCACCCACACAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGCTGCTGCTGGGCCTaGGCCTCCTGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNACCCWA*ASCSCC
Trigger: GCAGCAGCTGCAGGAGGCCCAGGCCCAGCAGCAGCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGGCCAGGGCCTCAGTaGGGAGGTGGTGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGPGPQ*GGGDAA
Trigger: AGCAGCATCACCACCTCCCCACTGAGGCCCTGGCCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCAGCTTGGCTGGGCTaGCCACCACAACCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAAWLG*PPQPAG
Trigger: CCCAGCCGGTTGTGGTGGCCAGCCCAGCCAAGCTGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGGGGCGGCAGGTCTaGCTTCACACCCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWGRQV*LHTQGL
Trigger: GAGTCCCTGGGTGTGAAGCCAGACCTGCCGCCCCCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCACCAGCAGCCCTGTTTaGGAGGCGGTGCCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGTSSPV*EAVPVV
Trigger: CACCACCGGCACCGCCTCCCAAACAGGGCTGCTGGT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGACCTGGCGACACCTaGAGTTCCTCTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGPGDT*SSSGGC
Trigger: GCAGCCCCCAGAGGAACTCCAGGTGTCGCCAGGTCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCTCGGAGGTGTCCATaGGCTCGCCGGTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPRRCP*ARRCLP
Trigger: TGGCAGGCACCGGCGAGCCCATGGACACCTCCGAGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCCTCACGGCTGGGATaGACCACTGGTTGGTTGCCG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGPSRLG*TTGWLP
Trigger: CGGCAACCAACCAGTGGTTCATCCCAGCCGTGAGGG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGAGGCGCCACCCCGCTaGGACTGGGCTTATTCCACG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAEAPPR*DWAYST
Trigger: CGTGGAATAAGCCCAGTCTCAGCGGGGTGGCGCCTC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGTACAGGCGGGTGTTaGTGGCGACTGCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGCTGGC*WRLRSG
Trigger: GCCACTGCGCAGTCGCCATCAACACCCGCCTGTACA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCTGGGGCAGGAGCGTaGTGCCTACTTGGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPGAGA*CLLGSA
Trigger: CGCTGACCCAAGTAGGCATCACGCTCCTGCCCCAGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCTGGGGCAGGAGCGTaGTGCCTACTTGGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPGAGA*CLLGSA
Trigger: CGCTGACCCAAGTAGGCATCACGCTCCTGCCCCAGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAACAGCAGGGACACCTTaGGTCCTGGCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNATAGTP*VLAAVG
Trigger: GCCCACCGCAGCCAGGACTCAAGGTGTCCCTGCTGT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGAAGGGAGGTCACGGTaGCAGGGGCTTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGEGRSR*QGLSQP
Trigger: AGGCTGGGAAAGCCCCTGTCACCGTGACCTCCCTTC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCAGGGTTGCTCACCATaGCTGGCGAGGAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGQGCSP*LARRPP
Trigger: AGGTGGCCTCCTCGCCAGTCATGGTGAGCAACCCTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGGGGAGACGCTGCTaGTGCCCAGGATGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWGRRC*CPGWWA
Trigger: AGCCCACCATCCTGGGCATCAGCAGCGTCTCCCCCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGTGCCCAAGGTGGTaGTGGGCGTGGCCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWCPRW*WAWPGK
Trigger: CTTCCCTGGCCACGCCCATCACCACCTTGGGCACCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTCTCCACCTCTCCCTaGTCGCTGGCAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALSTSP*SLAAGG
Trigger: CCCACCTGCTGCCAGCGATCAGGGAGAGGTGGAGAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTCTCCACCTCTCCCTaGTCGCTGGCAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLSTSP*SLAAGG
Trigger: CCCACCTGCTGCCAGCGATCAGGGAGAGGTGGAGAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCAGTGGGGAGGTGGTaGTGCTGCTGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASVGRW*CCCWAW
Trigger: CCAGGCCCAGCAGCAGCATCACCACCTCCCCACTGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCAATGGCTGGGTCGTTaGGACTGTCGGCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGQWLGR*DCRQGP
Trigger: TGGCCCCTGCCGACAGTCTCAACGACCCAGCCATTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCTCTCAGTGGCCGTTaGGGGCAGCAGCGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAALSGR*GQQRHS
Trigger: ACTGTGGCGCTGCTGCCCTCAACGGCCACTGAGAGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGGCTGAGATTTCGCTaGAGGGCCCCCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARLRFR*RAPGHR
Trigger: CCTGTGGCCGGGGGCCCTTCAGCGAAATCTCAGCCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGGGTGGCTCCCAGGTaGGGTGAGCACCATCCGGAC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARVAPR*GEHHPD
Trigger: GTCCGGATGGTGCTCACCTCACCTGGGAGCCACCCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTCGCCCCCAGCCTGTaGGCTCTGGATGGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALAPSL*ALDGQV
Trigger: TACCTGGCCATCCAGAGCTCACAGGCTGGGGGCGAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCGGCGATGCGGAAGATaGTGGCGGGCTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRRCGR*WRAWWC
Trigger: ACACCACCAAGCCCGCCATCATCTTCCGCATCGCCG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGCGGCTCGCGAGGGTaGAGTGCGAATGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASGSRG*SANAGT
Trigger: CGTCCCAGCATTCGCACTTCACCCTCGCGAGCCGCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTTAGTCCGCCTCTGCTaGTCAGGCTGCGCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLVRLC*SGCACR
Trigger: GCGGCAGGCGCAGCCTGAGCAGCAGAGGCGGACTAA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCCTTAGTCCGCCTCTaGTGCTCAGGCTGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPLVRL*CSGCAC
Trigger: GCAGGCGCAGCCTGAGCAGCAGAGGCGGACTAAGGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGCTTCCAGCGGGGCTaGAGAAGCACCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRFQRG*RSTAGK
Trigger: CTTGCCAGCGGTGCTTCTGCAGCCCCGCTGGAAGCG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGTGTTGATGGCGACTaGGCAGTGGCCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGVDGD*AVASPS
Trigger: GCTCGGGCTGGCCACTGCGCAGTCGCCATCAACACC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGTGTTGATGGCGACTaGGCAGTGGCCAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGVDGD*AVASPS
Trigger: GCTCGGGCTGGCCACTGCGCAGTCGCCATCAACACC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGTTGTTCCAGGCCTTaGGGTAGCCGTCACGCCCAC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGCSRP*GSRHAH
Trigger: GTGGGCGTGACGGCTACCGCAAGGCCTGGAACAACC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCCCCATGGGCACAGTaGGGAGGATGGTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPPWAQ*GGWCLA
Trigger: AGCCAGGCACCATCCTCCGCACTGTGCCCATGGGGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGTTGTGAGCCCGCCTaGCGCTGTCAGCGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGCEPA*RCQRGL
Trigger: CAGACCACGCTGACAGCGGCAGGCGGGCTCACAACC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGACACAGGGAGGTCATaGACAGGCTGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGDTGRS*TGWAST
Trigger: GGTGGAGGCCCAGCCTGTGCATGACCTCCCTGTGTC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCTGTGGAAGCCGACTaGAGAAGCTGCCGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAVEAD*RSCRGG
Trigger: GCCGCCACGGCAGCTTCTGCAGTCGGCTTCCACAGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAATGGCTCCCCTGTGCTaGTCAGATCCACGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAMAPLC*SDPRRP
Trigger: CGGCCGCCGTGGATCTGAGCAGCACAGGGGAGCCAT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCATGGCTCCCCTGTGCTaGTCAGATCCACGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGMAPLC*SDPRRP
Trigger: CGGCCGCCGTGGATCTGAGCAGCACAGGGGAGCCAT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGCGGCCTGGGCAGCTaGTTCTGCAGCAGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGCGLGS*FCSSRH
Trigger: GTGACGGCTGCTGCAGAAGCAGCTGCCCAGGCCGCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGGGCCTCCTGCAGCTaGTGCTGCTGCACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAWASCS*CCCTRA
Trigger: TGCCCTGGTGCAGCAGCAGCAGCTGCAGGAGGCCCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTCTTCATGGGGGCTTTaGTGGGTGGGGGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSSWGL*WVGAAG
Trigger: ACCTGCCGCCCCCACCCAGCAAAGCCCCCATGAAGA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTTGGCAGTGCGGCCTaGAGGGAGGTCTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVGSAA*REVCTG
Trigger: GCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGACACACCTAACGAATaGAGGCGGGCCGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGDTPNE*RRAGGR
Trigger: CCGGCCTCCGGCCCGCCTCCATTCGTTAGGTGTGTC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGCTCTTGGGAGGGTTaGCAGGCACAGATGGGACCG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGSWEG*QAQMGP
Trigger: CGGTCCCATCTGTGCCTGCCAACCCTCCCAAGAGCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCAAGACCTGGATGGTaGTGGTGGTCGGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAARPGW*WWSGVR
Trigger: CCGCACCCCCGACCACCACCACCATCCAGGTCTTGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGGGCTTTCCCAGCCTaGCTGGCAGGTCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGAFPA*LAGRMV
Trigger: CACCATGCGACCTGCCAGCCAGGCTGGGAAAGCCCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGGGCTTTCCCAGCCTaGCTGGCAGGTCGCATGGTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGAFPA*LAGRMV
Trigger: CACCATGCGACCTGCCAGCCAGGCTGGGAAAGCCCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGATGGTGGTACCCGCTaGGACACTCAGCACCGTGGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGDGGTR*DTQHRG
Trigger: CCCACGGTGCTGAGTGTCCCAGCGGGTACCACCATC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTCGTGCCGGGCTTGGTaGTACTGGGGGAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSCRAW*YWGRRC
Trigger: GCAGCGTCTCCCCCAGTACCACCAAGCCCGGCACGA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGGTCGTGCCGGGCTTaGTGGTACTGGGGGAGACGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAWSCRA*WYWGRR
Trigger: GCGTCTCCCCCAGTACCACCAAGCCCGGCACGACCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCAACGTGGTGACGGCTaGCTTGACGGCGGAGACGGT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGQRGDG*LDGGDG
Trigger: ACCGTCTCCGCCGTCAAGCCAGCCGTCACCACGTTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTGCCGCTGTCAGCGTaGTCTGTGCGGCCGACACAG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLPLSA*SVRPTQ
Trigger: CTGTGTCGGCCGCACAGACCACGCTGACAGCGGCAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGTTACCTGGGTGGGCTaGGACACGGGCTGCATGGTG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGVTWVG*DTGCMV
Trigger: CACCATGCAGCCCGTGTCCCAGCCCACCCAGGTAAC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCAGACGAACTGCACTTaGGTGGGCTGGGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGQTNCT*VGWGCP
Trigger: GGGACACCCCCAGCCCACCCAAGTGCAGTTCGTCTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGGCCATGTTGGAGGTaGCGGTGGTGGCGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRPCWR*RWWRCW
Trigger: CCAACACCGCCACCACCGCCACCTCCAACATGGCCG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCATCTCGCTGGTGGTTaGCGCCGACGCTCGACATGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGHLAGG*RRRSTW
Trigger: CCATGTCGAGCGTCGGCGCCAACCACCAGCGAGATG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGGACTTAGAGCCCTaGGCTGCCTCCAGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWDLEP*AASSAP
Trigger: TGGGGCGCTGGAGGCAGCCCAGGGCTCTAAGTCCCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTGGTCGCGCTGGTCTaGCGGGTTTGGCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALVALV*RVWHWD
Trigger: GTCCCAGTGCCAAACCCGCCAGACCAGCGCGACCAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGTGCTGGTCGCGCTaGTCTGGCGGGTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWCWSR*SGGFGT
Trigger: AGTGCCAAACCCGCCAGACCAGCGCGACCAGCACCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCAGTCATGGTGGTGCTaGTCGCGCTGGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGQSWWC*SRWSGG
Trigger: CCCGCCAGACCAGCGCGACCAGCACCACCATGACTG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGCACGGGGCCCCGGTaGCCATCACAGTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASTGPR*PSQSWW
Trigger: CCACCATGACTGTGATGGCCACCGGGGCCCCGTGCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTGGGCGAGCCACCCTaGAGGCTCTCGCACACAGGT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALGEPP*RLSHTG
Trigger: ACCTGTGTGCGAGAGCCTCCAGGGTGGCTCGCCCAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACAGTCACTGTGGTGCTaGGCGAGCCACCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAQSLWC*ASHPGG
Trigger: GCCTCCAGGGTGGCTCGCCCAGCACCACAGTGACTG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGACTTGGGTCACGGTaGCCGAGGGGCACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRLGSR*PRGTAV
Trigger: CACTGCTGTGCCCCTCGGCCACCGTGACCCAAGTCT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGGTTGGAGCAGACTTaGGTCACGGTGGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGLEQT*VTVAEG
Trigger: CCCCTCGGCCACCGTGACCCAAGTCTGCTCCAACCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTTCACGCTGTCGCCCTaGGTGCTCTCCACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGFTLSP*VLSTSP
Trigger: GGGAGAGGTGGAGAGCACCCAGGGCGACAGCGTGAA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGACTGCGTCACGGTaGTCACAGCCCGCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWTASR*SQPASV
Trigger: CACTGACGCGGGCTGTGACCACCGTGACGCAGTCCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTCCTGGCCCGAAGATaGCTCCCCTGTGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLLARR*LPCAAQ
Trigger: CTGAGCAGCACAGGGGAGCCATCTTCGGGCCAGGAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGAGCCGGCAGACTCCTaGCCCGAAGATGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGEPADS*PEDGSP
Trigger: AGGGGAGCCATCTTCGGGCCAGGAGTCTGCCGGCTC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTGTGTGGGTGGGGGTaGCTGGACCACCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLCGWG*LDHHSG
Trigger: GCCACTGTGGTGGTCCAGCCACCCCCACCCACACAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGGCCAGGGCCTCAGTaGGGAGGTGGTGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGPGPQ*GGGDAA
Trigger: AGCAGCATCACCACCTCCCCACTGAGGCCCTGGCCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGGCCAGGGCCTCAGTaGGGAGGTGGTGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGPGPQ*GGGDAA
Trigger: AGCAGCATCACCACCTCCCCACTGAGGCCCTGGCCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGAGCCAGGCTCTCAGTaGCCGTTGAGGGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAEPGSQ*PLRAAA
Trigger: CGCTGCTGCCCTCAACGGCCACTGAGAGCCTGGCTC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGGGGGCGGCAGGTCTaGCTTCACACCCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAWGRQV*LHTQGL
Trigger: GAGTCCCTGGGTGTGAAGCCAGACCTGCCGCCCCCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGGGGCGGCAGGTCTaGCTTCACACCCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWGRQV*LHTQGL
Trigger: GAGTCCCTGGGTGTGAAGCCAGACCTGCCGCCCCCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCATGGGGGCTTTGCTaGGTGGGGGCGGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASWGLC*VGAAGL
Trigger: CAGACCTGCCGCCCCCACCCAGCAAAGCCCCCATGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGAGGTCACAGAGGGTaGCTCCCAGGTGAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGGHRG*LPGEVS
Trigger: GCTCACCTCACCTGGGAGCCACCCTCTGTGACCTCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACGCATGAAGGCCAGCTaGGCCGGGGTGGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARMKAS*AGVELL
Trigger: CAAGAGCTCCACCCCGGCCCAGCTGGCCTTCATGCG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGCATGAAGGCCAGCTaGGCCGGGGTGGAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRMKAS*AGVELL
Trigger: CAAGAGCTCCACCCCGGCCCAGCTGGCCTTCATGCG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGGCCGCTTGTTGGCTaGCTTGGTGCCAGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGPLVG*LGARAV
Trigger: GACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCACCAGCAGCCCTGTTTaGGAGGCGGTGCCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGTSSPV*EAVPVV
Trigger: CACCACCGGCACCGCCTCCCAAACAGGGCTGCTGGT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGGGAGGTGGAGCAGTaGCTGCGGAAACCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGEVEQ*LRKPAA
Trigger: GGCTGCTGGTTTCCGCAGCCACTGCTCCACCTCCCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCCTCACGGCTGGGATaGACCACTGGTTGGTTGCCG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPSRLG*TTGWLP
Trigger: CGGCAACCAACCAGTGGTTCATCCCAGCCGTGAGGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGTACAGGCGGGTGTTaGTGGCGACTGCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGCTGGC*WRLRSG
Trigger: GCCACTGCGCAGTCGCCATCAACACCCGCCTGTACA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGAAGGGAGGTCACGGTaGCAGGGGCTTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAEGRSR*QGLSQP
Trigger: AGGCTGGGAAAGCCCCTGTCACCGTGACCTCCCTTC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACAGGGTTGCTCACCATaGCTGGCGAGGAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAQGCSP*LARRPP
Trigger: AGGTGGCCTCCTCGCCAGTCATGGTGAGCAACCCTG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTTGGGCTGCTCAGCCTaGCTTTGCTGCTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLGCSA*LCCSEG
Trigger: CCCCTCTGAGCAGCAAAGTCAGGCTGAGCAGCCCAA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGGCGATGCGGAAGATaGTGGCGGGCTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRRCGR*WRAWWC
Trigger: ACACCACCAAGCCCGCCATCATCTTCCGCATCGCCG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACGGCGATGCGGAAGATaGTGGCGGGCTTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARRCGR*WRAWWC
Trigger: ACACCACCAAGCCCGCCATCATCTTCCGCATCGCCG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGTTGTTCCAGGCCTTaGGGTAGCCGTCACGCCCAC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGCSRP*GSRHAH
Trigger: GTGGGCGTGACGGCTACCGCAAGGCCTGGAACAACC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCCCACCTGGGCGGCTaGAGTCTTCAGCATGCGAGT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPHLGG*SLQHAS
Trigger: ACTCGCATGCTGAAGACTGCAGCCGCCCAGGTGGGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCCGCCCCACTGGCCTaGGTGGTAGTGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPAPLA*VVVMMV
Trigger: CACCATCATCACTACCACGCAGGCCAGTGGGGCGGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGCTGGTGGAGACGGTaGCTGTCACTGTGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGWWRR*LSLCLG
Trigger: CCCTAGGCACAGTGACAGGCACCGTCTCCACCAGCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGTCAGCGTGGTCTGTaGGGCCGACACAGTGATGGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGCQRGL*GRHSDG
Trigger: GCCATCACTGTGTCGGCCGCACAGACCACGCTGACA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGCTGGGACACGGGCTaGATGGTGATGGTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGWDTG*MVMVGV
Trigger: AACCCCAACCATCACCATGCAGCCCGTGTCCCAGCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGACACAGGGAGGTCATaGACAGGCTGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNADTGRS*TGWAST
Trigger: GGTGGAGGCCCAGCCTGTGCATGACCTCCCTGTGTC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTGTCACAGACGAACTaGACTTGGGTGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLSQTN*TWVGWG
Trigger: CCCCCAGCCCACCCAAGTGCAGTTCGTCTGTGACAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGGTTTGAGCAGCCATaGTGCCCGGCCATGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGFEQP*CPAMLE
Trigger: CTCCAACATGGCCGGGCAGCATGGCTGCTCAAACCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTCACAGTCATGGTGGTaGTGGTCGCGCTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSQSWW*WSRWSG
Trigger: GCCAGACCAGCGCGACCAGCACCACCATGACTGTGA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTCAGAGGGGCCAACTaGACAAAAGCAGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLRGAN*TKAGLR
Trigger: CCGCAGCCCTGCTTTTGTGCAGTTGGCCCCTCTGAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACGCTGTCGCCCTGGGTaGTCTCCACCTCTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARCRPG*SPPLPD
Trigger: ATCAGGGAGAGGTGGAGAGCACCCAGGGCGACAGCG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGCTGTCGCCCTGGGTaGTCTCCACCTCTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRCRPG*SPPLPD
Trigger: ATCAGGGAGAGGTGGAGAGCACCCAGGGCGACAGCG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTGGGCAGCTGCTTCTaGAGCAGCCGTCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLGSCF*SSRHCQ
Trigger: CTGGCAGTGACGGCTGCTGCAGAAGCAGCTGCCCAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTGGGCAGCTGCTTCTaGAGCAGCCGTCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALGSCF*SSRHCQ
Trigger: CTGGCAGTGACGGCTGCTGCAGAAGCAGCTGCCCAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGCCTGAGTCACGGTTaGTGCTGCCTCGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRLSHG*CCLGGV
Trigger: GACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTTCGGTCAGGGTAGCTaGAGCCTGCAGCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGFGQGS*SLQLGW
Trigger: CCAGCCAAGCTGCAGGCTGCAGCTACCCTGACCGAA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCAGGGTGAAGTGCGAATaGTGGGACGGGGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRVKCE*WDGVGG
Trigger: CCCTCCCACCCCGTCCCAGCATTCGCACTTCACCCT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTCGCGAGGGTGAAGTaGGAATGCTGGGACGGGGTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLARVK*ECWDGV
Trigger: CACCCCGTCCCAGCATTCGCACTTCACCCTCGCGAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCACACCCAGGCCAGGGTaGCAGGAAAGCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGTPRPG*QESHSG
Trigger: CCCAGAGTGGCTTTCCTGGCACCCTGGCCTGGGTGT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGCAGCAGTTGGCAGTaGGGCCTGCAGGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNACSSWQ*GLQGGL
Trigger: CAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCGGGAAAGGGTGCGGTaGGGAGAAGTCAACAAGCGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRERVR*GEVNKR
Trigger: CCGCTTGTTGACTTCTCCCCACCGCACCCTTTCCCG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTGCAGAAGCACCGCTaGCAAGTTGGCGGGCGACAC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALQKHR*QVGGRH
Trigger: GTGTCGCCCGCCAACTTGCCAGCGGTGCTTCTGCAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGCTCTTGGGAGGGTTaGCAGGCACAGATGGGACCG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGSWEG*QAQMGP
Trigger: CGGTCCCATCTGTGCCTGCCAACCCTCCCAAGAGCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCACCGTTGGCAAGACCTaGATGGTGGTGGTGGTCGGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGTVGKT*MVVVVG
Trigger: CCCGACCACCACCACCATCCAGGTCTTGCCAACGGT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCGGTGGGCACAGAAATaGAGCTGCCAGGCACCGTTG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRWAQK*SCQAPL
Trigger: CAACGGTGCCTGGCAGCTCCATTTCTGTGCCCACCG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGATGGTGGTACCCGCTaGGACACTCAGCACCGTGGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNADGGTR*DTQHRG
Trigger: CCCACGGTGCTGAGTGTCCCAGCGGGTACCACCATC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCACCTTCACAGTGGCTaGGAGGGTGGTAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGHLHSG*EGGSAR
Trigger: CCTGGCACTACCACCCTCCCAGCCACTGTGAAGGTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCACCGATGTCCCCACCTaGGCGGCTGCAGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGTDVPT*AAAVFS
Trigger: GCTGAAGACTGCAGCCGCCCAGGTGGGGACATCGGT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCACTGTGGTCACCACCTaGGCTTGCTGGGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGTVVTT*ACWATV
Trigger: GACAGTGGCCCAGCAAGCCCAGGTGGTGACCACAGT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGACCCGTGGACGCCTaGCCTGTGACTGCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGPVDA*PVTAEV
Trigger: GACTTCAGCAGTCACAGGCCAGGCGTCCACGGGTCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCAGGATTGTTCCCGCTaGCAGGGGCCCTTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGQDCSR*QGPFGL
Trigger: CAGACCAAAGGGCCCCTGCCAGCGGGAACAATCCTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCTGCCCGTGGCCAGTaGCAATTTTGGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAARGQ*QFWGQQ
Trigger: CTGCTGTCCCCAAAATTGCCACTGGCCACGGGCAGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCACTCCCTGCTGCCCGTaGCCAGTGGCAATTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGTPCCP*PVAILG
Trigger: CCCCAAAATTGCCACTGGCCACGGGCAGCAGGGAGT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCCTTAAGCACCACCTaGGTCACTCCCTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPLSTT*VTPCCP
Trigger: CGGGCAGCAGGGAGTGACCCAGGTGGTGCTTAAGGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCAACGTGGTGACGGCTaGCTTGACGGCGGAGACGGT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGQRGDG*LDGGDG
Trigger: ACCGTCTCCGCCGTCAAGCCAGCCGTCACCACGTTG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTGGCTTGAGAGGGTaGCAATGGTGCCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGPGLRG*QWCPRW
Trigger: CCACCTTGGGCACCATTGCCACCCTCTCAAGCCAGG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTGCATGGTGATGGTTaGGGTTGTGAGCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLHGDG*GCEPAC
Trigger: GCAGGCGGGCTCACAACCCCAACCATCACCATGCAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGGTCATGCACAGGCTaGGCCTCCACCCCACTAGGT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRSCTG*ASTPLG
Trigger: ACCTAGTGGGGTGGAGGCCCAGCCTGTGCATGACCT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGCACTTGGGTGGGCTaGGGGTGTCCCCCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGCTWVG*GCPPRL
Trigger: TAACCTTGGGGGACACCCCCAGCCCACCCAAGTGCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGAACTGCACTTGGGTaGGCTGGGGGTGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRTALG*AGGVPQ
Trigger: TTGGGGGACACCCCCAGCCCACCCAAGTGCAGTTCG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACAGACGAACTGCACTTaGGTGGGCTGGGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAQTNCT*VGWGCP
Trigger: GGGACACCCCCAGCCCACCCAAGTGCAGTTCGTCTG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGTGCTGGTCGCGCTaGTCTGGCGGGTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWCWSR*SGGFGT
Trigger: AGTGCCAAACCCGCCAGACCAGCGCGACCAGCACCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTGTCACAGTCACTGTaGTGCTGGGCGAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLSQSL*CWASHP
Trigger: AGGGTGGCTCGCCCAGCACCACAGTGACTGTGACAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGACTTGGGTCACGGTaGCCGAGGGGCACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARLGSR*PRGTAV
Trigger: CACTGCTGTGCCCCTCGGCCACCGTGACCCAAGTCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCACACCCTCTGTGTTaGGAAAGGAGCCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAHPLC*ERSQQR
Trigger: GCGCTGCTGGCTCCTTTCCCAACACAGAGGGTGTGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATTCACGCTGTCGCCCTaGGTGCTCTCCACCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAFTLSP*VLSTSP
Trigger: GGGAGAGGTGGAGAGCACCCAGGGCGACAGCGTGAA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGGACTGCGTCACGGTaGTCACAGCCCGCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAWTASR*SQPASV
Trigger: CACTGACGCGGGCTGTGACCACCGTGACGCAGTCCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTGCTGGCGAGGACCTaGCGACACCTGGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALLART*RHLEFL
Trigger: GAGGAACTCCAGGTGTCGCCAGGTCCTCGCCAGCAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTCCTGGCCCGAAGATaGCTCCCCTGTGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALLARR*LPCAAQ
Trigger: CTGAGCAGCACAGGGGAGCCATCTTCGGGCCAGGAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATTCGGACTGTGTGGGTaGGGGTGGCTGGACCACCAC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAFGLCG*GWLDHH
Trigger: GTGGTGGTCCAGCCACCCCCACCCACACAGTCCGAA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTTCGGACTGTGTGGGTaGGGGTGGCTGGACCACCAC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGFGLCG*GWLDHH
Trigger: GTGGTGGTCCAGCCACCCCCACCCACACAGTCCGAA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTACTTCGGACTGTGTaGGTGGGGGTGGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLLRTV*VGVAGP
Trigger: TGGTCCAGCCACCCCCACCCACACAGTCCGAAGTAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGTGGTGGTGCCAGCTTaGGCCTCGGCCATTAGCTCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGVVVPA*ASAISS
Trigger: AGAGCTAATGGCCGAGGCCCAAGCTGGCACCACCAC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTGCAGCCTGCAGCTTaGCTGGGCTGGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLQPAA*LGWPPQ
Trigger: TTGTGGTGGCCAGCCCAGCCAAGCTGCAGGCTGCAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTGCAGCCTGCAGCTTaGCTGGGCTGGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALQPAA*LGWPPQ
Trigger: TTGTGGTGGCCAGCCCAGCCAAGCTGCAGGCTGCAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGAGGTCACAGAGGGTaGCTCCCAGGTGAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGGHRG*LPGEVS
Trigger: GCTCACCTCACCTGGGAGCCACCCTCTGTGACCTCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGGCCGCTTGTTGGCTaGCTTGGTGCCAGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGPLVG*LGARAV
Trigger: GACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCACATGGGCCGCTTGTTaGCTGGCTTGGTGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGTWAAC*LAWCQS
Trigger: GCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGGAACGCACAGCCTTaGGAGGGCGGAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARNAQP*EGGAGC
Trigger: ACAGCCAGCTCCGCCCTCCCAAGGCTGTGCGTTCCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTGCACAGCTGCTGCTaGTGGCCTGCTCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLHSCC*WPAPLP
Trigger: GGGCAATGGAGCAGGCCACCAGCAGCAGCTGTGCAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTGTGCCTAGGGTCGTaGCACCTGTGGTGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLCLGS*HLWCLS
Trigger: TGAAAGGCACCACAGGTGTCACGACCCTAGGCACAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCACATCACCCTGGCCTaGGTCGGCGATGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGHITLA*VGDGNC
Trigger: ACAGTTACCATCGCCGACTCAGGCCAGGGTGATGTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGCACTGGAGCTGGTaGTGTTCACGCTGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWHWSW*CSRCRP
Trigger: AGGGCGACAGCGTGAACATCACCAGCTCCAGTGCCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGGCACTGGAGCTGGTaGTGTTCACGCTGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAWHWSW*CSRCRP
Trigger: AGGGCGACAGCGTGAACATCACCAGCTCCAGTGCCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGCTCCCAGGTGAGGTaGGCACCATCCGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGSQVR*APSGLL
Trigger: CAAAAGTCCGGATGGTGCTCACCTCACCTGGGAGCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGCTCCCAGGTGAGGTaGGCACCATCCGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGSQVR*APSGLL
Trigger: CAAAAGTCCGGATGGTGCTCACCTCACCTGGGAGCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGCCGCCATCTTAACTaGCCTCCTTCCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGRHLN*PPSLWL
Trigger: GAGCCAAAGGGAAGGAGGGCAGTTAAGATGGCGGCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCACGAAGCCATAGGCTaGACACCCAGGGGGAATGTC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGHEAIG*TPRGNV
Trigger: GACATTCCCCCTGGGTGTGCAGCCTATGGCTTCGTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCACAAGGGAGAAGCTGTaGCCGAGTCGAGGACACGGA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGTREKL*PSRGHG
Trigger: TCCGTGTCCTCGACTCGGGCACAGCTTCTCCCTTGT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGTCAGCGTGGTCTGTaGGGCCGACACAGTGATGGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNACQRGL*GRHSDG
Trigger: GCCATCACTGTGTCGGCCGCACAGACCACGCTGACA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTGACAGTGCCAGGCTaGACATCACCCTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVTVPG*TSPWPE
Trigger: CTCAGGCCAGGGTGATGTGCAGCCTGGCACTGTCAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTGTCACAGACGAACTaGACTTGGGTGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLSQTN*TWVGWG
Trigger: CCCCCAGCCCACCCAAGTGCAGTTCGTCTGTGACAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTTTGAGCAGCCATGCTaGCCGGCCATGTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGFEQPC*PAMLEV
Trigger: CACCTCCAACATGGCCGGGCAGCATGGCTGCTCAAA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTCAGAGGGGCCAACTaGACAAAAGCAGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLRGAN*TKAGLR
Trigger: CCGCAGCCCTGCTTTTGTGCAGTTGGCCCCTCTGAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCACAGTCACTGTGGTaGTGGGCGAGCCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASQSLW*WASHPG
Trigger: TCCAGGGTGGCTCGCCCAGCACCACAGTGACTGTGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTCACAGTCACTGTGGTaGTGGGCGAGCCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSQSLW*WASHPG
Trigger: TCCAGGGTGGCTCGCCCAGCACCACAGTGACTGTGA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCAAGATGGCTCCCCTGTaGTGCTCAGATCCACGGCGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGKMAPL*CSDPRR
Trigger: CCGCCGTGGATCTGAGCAGCACAGGGGAGCCATCTT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAAGATGGCTCCCCTGTaGTGCTCAGATCCACGGCGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAKMAPL*CSDPRR
Trigger: CCGCCGTGGATCTGAGCAGCACAGGGGAGCCATCTT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTTCGGTCAGGGTAGCTaGAGCCTGCAGCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGFGQGS*SLQLGW
Trigger: CCAGCCAAGCTGCAGGCTGCAGCTACCCTGACCGAA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATTCGGTCAGGGTAGCTaGAGCCTGCAGCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAFGQGS*SLQLGW
Trigger: CCAGCCAAGCTGCAGGCTGCAGCTACCCTGACCGAA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCATAGCCCTTCTCATTaGGGGCGGCGATGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGHSPSH*GRRCGR
Trigger: TCTTCCGCATCGCCGCCCGCAATGAGAAGGGCTATG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCATGCTGCACAGCTGCTaGTGGTGGCCTGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGMLHSC*WWPAPL
Trigger: CAATGGAGCAGGCCACCAGCAGCAGCTGTGCAGCAT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTAGGCTCAAGAAGCTaGAGGCCGCTGAGTCCCGTC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLGSRS*RPLSPV
Trigger: GACGGGACTCAGCGGCCTCCAGCTTCTTGAGCCTAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGGGAAAGGGTGCGGTaGGGAGAAGTCAACAAGCGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRERVR*GEVNKR
Trigger: CCGCTTGTTGACTTCTCCCCACCGCACCCTTTCCCG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCATGGTGGTTGCCGAGTaGAGACTGCGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGMVVAE*RLRGRG
Trigger: GCCTCTTCCTCGCAGTCTCCACTCGGCAACCACCAT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTCCTTGCAGCAGACCTaGTTGTTCCAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSLQQT*LFQALR
Trigger: CCGCAAGGCCTGGAACAACCAGGTCTGCTGCAAGGA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGTTGGCAGGCACAGATaGGACCGGATTGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGVGRHR*DRIGCR
Trigger: CCTACACCCAATCCGGTCCCATCTGTGCCTGCCAAC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGCGTGATGCCTACTTaGGTCAGCGGCTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSVMPT*VSGCTA
Trigger: TGCTGTGCAGCCGCTGACCCAAGTAGGCATCACGCT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTTGGCAAGACCTGGATaGTGGTGGTGGTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLARPG*WWWSGV
Trigger: CACCCCCGACCACCACCACCATCCAGGTCTTGCCAA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCTGCCAGGCACCGTTaGCAAGACCTGGATGGTGGT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAARHR*QDLDGG
Trigger: ACCACCATCCAGGTCTTGCCAACGGTGCCTGGCAGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTGGGCACTCTGTGTTaGCACAACCATCCGCACTCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLGTLC*HNHPHS
Trigger: GGAGTGCGGATGGTTGTGCCAACACAGAGTGCCCAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCATGGTCTTCACGATaGTGGTACCCGCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGPWSSR*WYPLGH
Trigger: GTGTCCCAGCGGGTACCACCATCGTGAAGACCATGG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGTTGCTCACCATGACTaGCGAGGAGGCCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGVAHHD*RGGHLH
Trigger: GTGAAGGTGGCCTCCTCGCCAGTCATGGTGAGCAAC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAACTGTGGTCACCACCTaGGCTTGCTGGGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNATVVTT*ACWATV
Trigger: GACAGTGGCCCAGCAAGCCCAGGTGGTGACCACAGT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCAGGATTGTTCCCGCTaGCAGGGGCCCTTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGQDCSR*QGPFGL
Trigger: CAGACCAAAGGGCCCCTGCCAGCGGGAACAATCCTG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCTGCCCGTGGCCAGTaGCAATTTTGGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAAARGQ*QFWGQQ
Trigger: CTGCTGTCCCCAAAATTGCCACTGGCCACGGGCAGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCTGGCTTGAGAGGGTaGCAATGGTGCCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPGLRG*QWCPRW
Trigger: CCACCTTGGGCACCATTGCCACCCTCTCAAGCCAGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTGCATGGTGATGGTTaGGGTTGTGAGCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLHGDG*GCEPAC
Trigger: GCAGGCGGGCTCACAACCCCAACCATCACCATGCAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCAGAGTTACCTGGGTaGGCTGGGACACGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASELPG*AGTRAA
Trigger: TGCAGCCCGTGTCCCAGCCCACCCAGGTAACTCTGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTGATCAGAGTTACCTaGGTGGGCTGGGACACGGGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVIRVT*VGWDTG
Trigger: GCCCGTGTCCCAGCCCACCCAGGTAACTCTGATCAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGCTGCACATCACCCTaGCCTGAGTCGGCGATGGTA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGCTSP*PESAMV
Trigger: TACCATCGCCGACTCAGGCCAGGGTGATGTGCAGCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGCACTTGGGTGGGCTaGGGGTGTCCCCCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNACTWVG*GCPPRL
Trigger: TAACCTTGGGGGACACCCCCAGCCCACCCAAGTGCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGCGGGTTTGGCACTaGGACTTAGAGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWRVWH*DLEPWA
Trigger: AGCCCAGGGCTCTAAGTCCCAGTGCCAAACCCGCCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTGGTCTGGCGGGTTTaGCACTGGGACTTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALVWRV*HWDLEP
Trigger: GGGCTCTAAGTCCCAGTGCCAAACCCGCCAGACCAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGGCCATCACAGTCATaGTGGTGCTGGTCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAWPSQS*WCWSRW
Trigger: CCAGCGCGACCAGCACCACCATGACTGTGATGGCCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGCCATCACAGTCATaGTGGTGCTGGTCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWPSQS*WCWSRW
Trigger: CCAGCGCGACCAGCACCACCATGACTGTGATGGCCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCCTGTGGGAAGAAGTaGCGTCGGGAAGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASCGKK*RREAGH
Trigger: GTGCCCTGCTTCCCGACGCCACTTCTTCCCACAGGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGACTCCACGGTCCTGTaGGAAGAAGTGGCGTCGGGA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNADSTVL*EEVASG
Trigger: TCCCGACGCCACTTCTTCCCACAGGACCGTGGAGTC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCACACCCTCTGTGTTaGGAAAGGAGCCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAHPLC*ERSQQR
Trigger: GCGCTGCTGGCTCCTTTCCCAACACAGAGGGTGTGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCCCCATCAGGGCTGTaGAAGCCGACTGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPPSGL*KPTAEA
Trigger: AGCTTCTGCAGTCGGCTTCCACAGCCCTGATGGGGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTACTTCGGACTGTGTaGGTGGGGGTGGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALLRTV*VGVAGP
Trigger: TGGTCCAGCCACCCCCACCCACACAGTCCGAAGTAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTGGTGGTGCCAGCTTaGGCCTCGGCCATTAGCTCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVVVPA*ASAISS
Trigger: AGAGCTAATGGCCGAGGCCCAAGCTGGCACCACCAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACAATGGGTATGGTGGTaGCCTGGCCCTCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAQWVWW*PGPPDP
Trigger: AGGGTCAGGAGGGCCAGGCCACCACCATACCCATTG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCACAATGGGTATGGTaGTGGCCTGGCCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAQWVW*WPGPPD
Trigger: GTCAGGAGGGCCAGGCCACCACCATACCCATTGTGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCTGTGTCAGCACAATaGGTATGGTGGTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAVSAQ*VWWWPG
Trigger: GCCAGGCCACCACCATACCCATTGTGCTGACACAGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCCACCACAACCGGCTaGGGGGCCACAAATGTGTTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAATTTG*GATNVL
Trigger: CAACACATTTGTGGCCCCCCAGCCGGTTGTGGTGGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCAGCCTGTGAGCTCTaGATGGCCAGGTACACGGAG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPACEL*MARYTE
Trigger: CTCCGTGTACCTGGCCATCCAGAGCTCACAGGCTGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCAGCCTGTGAGCTCTaGATGGCCAGGTACACGGAG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPACEL*MARYTE
Trigger: CTCCGTGTACCTGGCCATCCAGAGCTCACAGGCTGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCACATGGGCCGCTTGTTaGCTGGCTTGGTGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGTWAAC*LAWCQS
Trigger: GCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCACTTCCCGCCTTATaGCTCCTTCCCACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASLPAL*LLPTGA
Trigger: GGCTCCTGTGGGAAGGAGTCATAAGGCGGGAAGTGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCATGGTATCCAGGTTaGGACAAGCCAGCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGPWYPG*DKPACW
Trigger: CCAACACGCTGGCTTGTCTCAACCTGGATACCATGG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGAGGACCGGTCACTTTaGGAACAGCAGGGACACCTT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGEDRSL*EQQGHL
Trigger: AAGGTGTCCCTGCTGTTCTCAAAGTGACCGGTCCTC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGACGCCTGGCCTGTaGCTGCTGAAGTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWTPGL*LLKSEL
Trigger: CAGTTCAGACTTCAGCAGTCACAGGCCAGGCGTCCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTTGGTCTGGATGATCTaGGTCACAGGACCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLVWMI*VTGPVD
Trigger: GTCCACGGGTCCTGTGACTCAGATCATCCAGACCAA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCCCTTTGGTCTGGATaGTCTGAGTCACAGGACCCG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGALWSG*SESQDP
Trigger: CGGGTCCTGTGACTCAGATCATCCAGACCAAAGGGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCCCTTTGGTCTGGATaGTCTGAGTCACAGGACCCG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAALWSG*SESQDP
Trigger: CGGGTCCTGTGACTCAGATCATCCAGACCAAAGGGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGGCTTGCCATCTGCTaGGGTCACCAGCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGLAIC*GHQLQD
Trigger: ATCCTGAAGCTGGTGACCTCAGCAGATGGCAAGCCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTGTGCCTAGGGTCGTaGCACCTGTGGTGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALCLGS*HLWCLS
Trigger: TGAAAGGCACCACAGGTGTCACGACCCTAGGCACAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTTGATCACCTGGCTTaGGAGGGTGGCAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVDHLA*EGGNGA
Trigger: GGCACCATTGCCACCCTCTCAAGCCAGGTGATCAAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGTTGATCACCTGGCTTaGGAGGGTGGCAATGGTGCC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGVDHLA*EGGNGA
Trigger: GGCACCATTGCCACCCTCTCAAGCCAGGTGATCAAC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCCGGCCACAGGCATTaGTTCCGGCAACACGAAACT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPGHRH*FRQHET
Trigger: AGTTTCGTGTTGCCGGAATCAATGCCTGTGGCCGGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCACGTCTTAAAGGCTaGGATTTCGCTGAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGARLKG*DFAEGP
Trigger: GGGCCCTTCAGCGAAATCTCAGCCTTTAAGACGTGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCACTATTCCCTCGTTaGCGCCGCCAAACACCACGA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPLFPR*RRQTPR
Trigger: TCGTGGTGTTTGGCGGCGGCAACGAGGGAATAGTGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCACGAAGCCATAGGCTaGACACCCAGGGGGAATGTC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGHEAIG*TPRGNV
Trigger: GACATTCCCCCTGGGTGTGCAGCCTATGGCTTCGTG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCACCTTGAGTCCTGGCTaGGGTGGGCACAGAAATGGA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGTLSPG*GGHRNG
Trigger: TCCATTTCTGTGCCCACCGCAGCCAGGACTCAAGGT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTGCAGTCTTCAGCATaGGAGTGGCAGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLQSSA*EWQGCS
Trigger: TGAGCAACCCTGCCACTCGCATGCTGAAGACTGCAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAACCACGCTACCATTCTaGTGGCCCACAGTCGAGGTC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNATTLPF*WPTVEV
Trigger: GACCTCGACTGTGGGCCAGCAGAATGGTAGCGTGGT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTGAGTCACGGTTGCTaGTGCCTCGGAGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALSHGC*CLGGVH
Trigger: ATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCAGGGCAGCCAGCTCCTaGTGTGTCAGCACAATGGGT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRAASS*CVSTMG
Trigger: ACCCATTGTGCTGACACAGCAGGAGCTGGCTGCCCT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCACCCAGGGACTCGATaGCATTGGCCACTTCGGTCA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGHPGTR*HWPLRS
Trigger: TGACCGAAGTGGCCAATGGCATCGAGTCCCTGGGTG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACATAGCCCTTCTCATTaGGGGCGGCGATGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAHSPSH*GRRCGR
Trigger: TCTTCCGCATCGCCGCCCGCAATGAGAAGGGCTATG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCATGCTGCACAGCTGCTaGTGGTGGCCTGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGMLHSC*WWPAPL
Trigger: CAATGGAGCAGGCCACCAGCAGCAGCTGTGCAGCAT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGTCCTCGCTATCATTaGCCAGACCCCCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGPRYH*PDPQTG
Trigger: ACCTGTTTGGGGGTCTGGCCAATGATAGCGAGGACC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCAGTTGTACTCGGGCTaGGGGTGGTGGCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGQLYSG*GWWLFC
Trigger: ACAGAAAAGCCACCACCCCCAGCCCGAGTACAACTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTCACCTCCAGGGAGTTaGTGTTGGCGCGTACCAGTT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSPPGS*CWRVPV
Trigger: AACTGGTACGCGCCAACACCAACTCCCTGGAGGTGA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTTGGCAGGCACAGATaGGACCGGATTGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVGRHR*DRIGCR
Trigger: CCTACACCCAATCCGGTCCCATCTGTGCCTGCCAAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTGGGCACTCTGTGTTaGCACAACCATCCGCACTCC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALGTLC*HNHPHS
Trigger: GGAGTGCGGATGGTTGTGCCAACACAGAGTGCCCAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGTCTTCACGATGGTaGTACCCGCTGGGACACTCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWSSRW*YPLGHS
Trigger: TGAGTGTCCCAGCGGGTACCACCATCGTGAAGACCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCAGAGCACTGCCTCCTaGGACAGAGATGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGQSTAS*DRDGAL
Trigger: AAGAGCCCCATCTCTGTCCCAGGAGGCAGTGCTCTG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTCGGGGAGGCCAGAATaGACACAGGGAGGTCATGCA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSGRPE*TQGGHA
Trigger: TGCATGACCTCCCTGTGTCCATTCTGGCCTCCCCGA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCATCACAGTCATGGTaGTGCTGGTCGCGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPSQSW*CWSRWS
Trigger: AGACCAGCGCGACCAGCACCACCATGACTGTGATGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCATCACAGTCATGGTaGTGCTGGTCGCGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPSQSW*CWSRWS
Trigger: AGACCAGCGCGACCAGCACCACCATGACTGTGATGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGTGGTGCCTGTCTCGTaGGTCTCACATGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGVVPVS*VSHGGL
Trigger: CAACCCACCATGTGAGACCCACGAGACAGGCACCAC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTGGTGCCTGTCTCGTaGGTCTCACATGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVVPVS*VSHGGL
Trigger: CAACCCACCATGTGAGACCCACGAGACAGGCACCAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCAGTGGAAGTGGTCTaGTGTGTCTCACAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPVEVV*CVSQGR
Trigger: TCGCCCCTGTGAGACACACCAGACCACTTCCACTGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCAGCACAATGGGTATaGTGGTGGCCTGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASAQWV*WWPGPP
Trigger: AGGAGGGCCAGGCCACCACCATACCCATTGTGCTGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTCAGCACAATGGGTATaGTGGTGGCCTGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSAQWV*WWPGPP
Trigger: AGGAGGGCCAGGCCACCACCATACCCATTGTGCTGA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCTGTGTCAGCACAATaGGTATGGTGGTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAVSAQ*VWWWPG
Trigger: GCCAGGCCACCACCATACCCATTGTGCTGACACAGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGTCGATGTGGGCGTTaGAAAGGCTGGAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSRCGR*KGWRTA
Trigger: TGCAGTCCTCCAGCCTTTCCAACGCCCACATCGACT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTTTCTGGAGAGGACATaGGCCGCTTGTTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGFLERT*AACWLA
Trigger: AGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTCGGTAGGGGAGGGCTaGAAAGATTGGCTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSVGEG*KDWLLG
Trigger: ACCGAGCAGCCAATCTTTCCAGCCCTCCCCTACCGA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCGGTAGGGGAGGGCTaGAAAGATTGGCTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASVGEG*KDWLLG
Trigger: ACCGAGCAGCCAATCTTTCCAGCCCTCCCCTACCGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGGCGTCTTTGCTTTaGGTCTCTTCCACTCCCACC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWASLL*VSSTPT
Trigger: GGTGGGAGTGGAAGAGACTCAAAGCAAAGACGCCCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTAGGACCCCGTAAGTaGTGGGAATGTCCCAGGCTA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVGPRK*WECPRL
Trigger: TAGCCTGGGACATTCCCATCACTTACGGGGTCCTAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGAGGACCGGTCACTTTaGGAACAGCAGGGACACCTT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAEDRSL*EQQGHL
Trigger: AAGGTGTCCCTGCTGTTCTCAAAGTGACCGGTCCTC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGTGACTGCTGAAGTCTaGACTGGTTTGGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGVTAEV*TGLVWT
Trigger: GGTCCAGACCAAACCAGTTCAGACTTCAGCAGTCAC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTTGGTCTGGATGATCTaGGTCACAGGACCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLVWMI*VTGPVD
Trigger: GTCCACGGGTCCTGTGACTCAGATCATCCAGACCAA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGGTGCTCCAGTTCCTaGAGTCATCACCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRCSSS*SHHLGG
Trigger: ACCACCAAGGTGATGACTTCAGGAACTGGAGCACCT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGCCGGCCAGCTCATTaGGGCAATTGCTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGCRPAH*GNCSQW
Trigger: CCATTGAGAGCAATTGCCTCAATGAGCTGGCCGGCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCCCAAATCATCGTCTaGTGGGACAGCATCATCTGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAQIIV*WDSIIW
Trigger: CCAGATGATGCTGTCCCATCAGACGATGATTTGGGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCACGTCTTAAAGGCTaGGATTTCGCTGAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGARLKG*DFAEGP
Trigger: GGGCCCTTCAGCGAAATCTCAGCCTTTAAGACGTGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTATAGATGCGGAGTaGTCGCCCATGAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGPIDAE*SPMRNE
Trigger: CTCATTCCTCATGGGCGATCACTCCGCATCTATAGG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGTCAGTTCTTCCACTaGACACCAAACTCAAGGCGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGQFFH*TPNSRR
Trigger: CCGCCTTGAGTTTGGTGTGCAGTGGAAGAACTGACC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCAGTTCCGGGAAAGGGTaGGGTGGGGAGAAGTCAACA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSSGKG*GGEKST
Trigger: TGTTGACTTCTCCCCACCGCACCCTTTCCCGGAACT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCATTTCCGATGGTGGTTaGCGAGTGGAGACTGCGAGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGISDGG*RVETAR
Trigger: CCTCGCAGTCTCCACTCGGCAACCACCATCGGAAAT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAATTTCCGATGGTGGTTaGCGAGTGGAGACTGCGAGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAISDGG*RVETAR
Trigger: CCTCGCAGTCTCCACTCGGCAACCACCATCGGAAAT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCACCTTGAGTCCTGGCTaGGGTGGGCACAGAAATGGA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGTLSPG*GGHRNG
Trigger: TCCATTTCTGTGCCCACCGCAGCCAGGACTCAAGGT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTCATCTGTGGGCTACTaGCAATCACCGTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSSVGY*QSPFPG
Trigger: CCCAGGGAACGGTGATTGGCAGTAGCCCACAGATGA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTCCACCCCACTAGGTaGCGTGATCAGAGTTACCTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALHPTR*RDQSYL
Trigger: CAGGTAACTCTGATCACGGCACCTAGTGGGGTGGAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTCCACCCCACTAGGTaGCGTGATCAGAGTTACCTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLHPTR*RDQSYL
Trigger: CAGGTAACTCTGATCACGGCACCTAGTGGGGTGGAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCCCCCGGGCTCCCGTaGCATGCTCGGCCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECAPGLP*HARPKE
Trigger: CTCCTTGGGCCGAGCATGGCACGGGAGCCCGGGGGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGAAACTTATAGGCTGTaGCTGGCTGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGETYRL*LAAAPA
Trigger: AGCAGGAGCTGCAGCCAGGCACAGCCTATAAGTTTC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCTCGACCCTATAGATaGGGAGTGATCGCCCATGAG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAARPYR*GVIAHE
Trigger: CTCATGGGCGATCACTCCGCATCTATAGGGTCGAGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTTGCTGGCAAGCCTTaGTCCTCGACAGAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLAGKP*SSTEVW
Trigger: CCAAACTTCTGTCGAGGAGCAAGGCTTGCCAGCAAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGTCCTCGCTATCATTaGCCAGACCCCCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGPRYH*PDPQTG
Trigger: ACCTGTTTGGGGGTCTGGCCAATGATAGCGAGGACC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACAGTTGTACTCGGGCTaGGGGTGGTGGCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAQLYSG*GWWLFC
Trigger: ACAGAAAAGCCACCACCCCCAGCCCGAGTACAACTG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCAGGGAGTTGGTGTTaGCGCGTACCAGTTGTACTC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPGSWC*RVPVVL
Trigger: GAGTACAACTGGTACGCGCCAACACCAACTCCCTGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCACCTCCAGGGAGTTaGTGTTGGCGCGTACCAGTT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASPPGS*CWRVPV
Trigger: AACTGGTACGCGCCAACACCAACTCCCTGGAGGTGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCAATCACCGTTCCCTaGGCACTCTGTGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPITVP*ALCVGT
Trigger: TGTGCCAACACAGAGTGCCCAGGGAACGGTGATTGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCATCCCACTCATCTGTaGGCTACTGCCAATCACCGT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGHPTHL*ATANHR
Trigger: ACGGTGATTGGCAGTAGCCCACAGATGAGTGGGATG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGGTCTTCACGATGGTaGTACCCGCTGGGACACTCA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAWSSRW*YPLGHS
Trigger: TGAGTGTCCCAGCGGGTACCACCATCGTGAAGACCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCAGGTGTCACAGCCATaGTCTTCACGATGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGQVSQP*SSRWWY
Trigger: GTACCACCATCGTGAAGACCATGGCTGTGACACCTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGTGGGGTTGATCACCTaGCTTGAGAGGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGVGLIT*LERVAM
Trigger: CATTGCCACCCTCTCAAGCCAGGTGATCAACCCCAC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCACGCTACCATTCTGCTaGCCCACAGTCGAGGTCACA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGTLPFC*PTVEVT
Trigger: TGTGACCTCGACTGTGGGCCAGCAGAATGGTAGCGT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAACGCTACCATTCTGCTaGCCCACAGTCGAGGTCACA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNATLPFC*PTVEVT
Trigger: TGTGACCTCGACTGTGGGCCAGCAGAATGGTAGCGT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTCTCACATGGTGGGTTaGAGCAGACTTGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSHMVG*SRLGSR
Trigger: CCGTGACCCAAGTCTGCTCCAACCCACCATGTGAGA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCTCACATGGTGGGTTaGAGCAGACTTGGGTCACGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASHMVG*SRLGSR
Trigger: CCGTGACCCAAGTCTGCTCCAACCCACCATGTGAGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCCTGCTGCGCGGCCTaGAGCACCGCCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECACCAA*STAWMA
Trigger: GGCCATCCAGGCGGTGCTCCAGGCCGCGCAGCAGGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCACAAATGTGTTGGATaGAGCCAGGCTCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGHKCVG*SQALSG
Trigger: GCCACTGAGAGCCTGGCTCCATCCAACACATTTGTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGTTTTCCTTCTTCATaGGGGCTTTGCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGFPSS*GLCWVG
Trigger: CCCCACCCAGCAAAGCCCCCATGAAGAAGGAAAACC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGTTTTCCTTCTTCATaGGGGCTTTGCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGFPSS*GLCWVG
Trigger: CCCCACCCAGCAAAGCCCCCATGAAGAAGGAAAACC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTTATAGGCTGTGCCTaGCTGCAGCTCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLIGCA*LQLLLL
Trigger: AAGAAGCAGGAGCTGCAGCCAGGCACAGCCTATAAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGTCGATGTGGGCGTTaGAAAGGCTGGAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASRCGR*KGWRTA
Trigger: TGCAGTCCTCCAGCCTTTCCAACGCCCACATCGACT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCAGTCGATGTGGGCGTTaGAAAGGCTGGAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSRCGR*KGWRTA
Trigger: TGCAGTCCTCCAGCCTTTCCAACGCCCACATCGACT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCTTGTTGGCTGGCTTaGTGCCAGAGCTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGACWLA*CQSCLY
Trigger: GTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAACAAATGCAGCAGTTaGCAGTGCGGCCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNANKCSS*QCGLQG
Trigger: TCCCTGCAGGCCGCACTGCCAACTGCTGCATTTGTT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCAACAAATGCAGCAGTTaGCAGTGCGGCCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGNKCSS*QCGLQG
Trigger: TCCCTGCAGGCCGCACTGCCAACTGCTGCATTTGTT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGTTCCTGTTGTAGCCTaGGGACCGGTCACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGVPVVA*GPVTLR
Trigger: TCTCAAAGTGACCGGTCCTCAGGCTACAACAGGAAC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTGACTGCTGAAGTCTaGACTGGTTTGGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVTAEV*TGLVWT
Trigger: GGTCCAGACCAAACCAGTTCAGACTTCAGCAGTCAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCCCAAATCATCGTCTaGTGGGACAGCATCATCTGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAQIIV*WDSIIW
Trigger: CCAGATGATGCTGTCCCATCAGACGATGATTTGGGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCGGGGTGGAGCTCTTaGGCTCGCCCCCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPGWSS*ARPQPV
Trigger: CACAGGCTGGGGGCGAGCTCAAGAGCTCCACCCCGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCGCAGTACACCCGCATaGAGGCCAGCTGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRSTPA*RPAGPG
Trigger: CCCCGGCCCAGCTGGCCTTCATGCGGGTGTACTGCG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTCAGCTTCCTCTCACTaGCCATCGGCCTTAGATTTC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSASSH*PSALDF
Trigger: GAAATCTAAGGCCGATGGTCAGTGAGAGGAAGCTGA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGAGTGGGCTCCAAGGTaGCTAAACGTGACATTTTCC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGEWAPR*LNVTFS
Trigger: GGAAAATGTCACGTTTAGTCACCTTGGAGCCCACTC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCACGGCAGGGCGCTCATaGCTCCTCCCTGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECTAGRS*LLPGSR
Trigger: GCGGCTCCCAGGGAGGAGGCATGAGCGCCCTGCCGT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCCGTGTTGTACACGTaGAGTTCGTCCACTATTCCC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAVLYT*SSSTIP
Trigger: GGGAATAGTGGACGAACTGCACGTGTACAACACGGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGAACCACTGGTTGGTTaGCGTGTTGTACACGTGCAG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAEPLVG*RVVHVQ
Trigger: CTGCACGTGTACAACACGGCAACCAACCAGTGGTTC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGAACCACTGGTTGGTTaGCGTGTTGTACACGTGCAG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGEPLVG*RVVHVQ
Trigger: CTGCACGTGTACAACACGGCAACCAACCAGTGGTTC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAACAGTGCCTGACTTGTaGACTGTGATGATAGGGCGG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNATVPDL*TVMIGR
Trigger: CCGCCCTATCATCACAGTGCACAAGTCAGGCACTGT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCACAGTGCCTGACTTGTaGACTGTGATGATAGGGCGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGTVPDL*TVMIGR
Trigger: CCGCCCTATCATCACAGTGCACAAGTCAGGCACTGT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCAGTGCGGAGGATGGTaGCTGGCTGTCCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECQCGGW*LAVPGP
Trigger: GGGCCCCGGGACAGCCAGGCACCATCCTCCGCACTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCACAAGAGAAGCAGCTaGCTCCTGTCTGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGHKRSS*LLSVTD
Trigger: GTCTGTGACAGACAGGAGGCAGCTGCTTCTCTTGTG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGCAGGGGTGCCAGCTaGACAGGCCCGACGGGCATC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGRGAS*TGPTGI
Trigger: GATGCCCGTCGGGCCTGTGCAGCTGGCACCCCTGCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCGGGCTCCCGTGCCATaGTCGGCCCAAGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRAPVP*SAQGVG
Trigger: GCCCACTCCTTGGGCCGAGCATGGCACGGGAGCCCG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGTGCCCATGACGGCCTaGTGCGCGGCCTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECVPMTA*CAAWST
Trigger: GGTGCTCCAGGCCGCGCAGCAGGCCGTCATGGGCAC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCAGCAGCGCCACAGTaGTGGGGACCGTGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECAAAPQ*WGPCRP
Trigger: TGGCCGGCACGGTCCCCAGCACTGTGGCGCTGCTGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCTGGGATGAACCACTaGTTGGTTGCCGTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAAGMNH*LVAVLY
Trigger: GTACAACACGGCAACCAACCAGTGGTTCATCCCAGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCTGGGATGAACCACTaGTTGGTTGCCGTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAGMNH*LVAVLY
Trigger: GTACAACACGGCAACCAACCAGTGGTTCATCCCAGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGACAAGCCAGCGTGTTaGTACACTTCCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGDKPAC*YTSTPS
Trigger: AGAAGGAGTGGAAGTGTACCAACACGCTGGCTTGTC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGTGTATCCATCAGGATaGTCTCCCAGGCCATGGTAT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGVYPSG*SPRPWY
Trigger: ATACCATGGCCTGGGAGACCATCCTGATGGATACAC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCATGGCGACTGCGCAGTaGCCAGCCCGAGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECMATAQ*PARARG
Trigger: CCCCCGTGCTCGGGCTGGCCACTGCGCAGTCGCCAT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGTGCGGGGGCAGCCTaGGGCAGGAGCGTGATGCCT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGAGAA*GRSVMP
Trigger: AGGCATCACGCTCCTGCCCCAGGCTGCCCCCGCACC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGGGGATCTTCTGGGTaGCAGCGGCCGCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGGSSG*QRPQRP
Trigger: TGGCCGCTGCGGCCGCTGCCACCCAGAAGATCCCCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCTGCCCGGCCATGTTaGAGGTGGCGGTGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECAARPC*RWRWWR
Trigger: CCGCCACCACCGCCACCTCCAACATGGCCGGGCAGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAACATGGTGGTGCCAGTaGAAGTGGTCTGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNATWWCQ*KWSGVS
Trigger: AGACACACCAGACCACTTCCACTGGCACCACCATGT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAATTGCTCTCAATGGCTaGGTCGTTGAGACTGTCGGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAIALNG*VVETVG
Trigger: GCCGACAGTCTCAACGACCCAGCCATTGAGAGCAAT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCACAAATGTGTTGGATaGAGCCAGGCTCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGHKCVG*SQALSG
Trigger: GCCACTGAGAGCCTGGCTCCATCCAACACATTTGTG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTTATAGGCTGTGCCTaGCTGCAGCTCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLIGCA*LQLLLL
Trigger: AAGAAGCAGGAGCTGCAGCCAGGCACAGCCTATAAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCAGGCAGGAGGGGCTaGGCCCGCAGTACACCCGCA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPGRRG*ARSTPA
Trigger: TGCGGGTGTACTGCGGGCCCAGCCCCTCCTGCCTGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCAGAGCTGTCTTTACTaGTTTCCTGCAGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGQSCLY*FPAATS
Trigger: TGAGGTGGCTGCAGGAAACCAGTAAAGACAGCTCTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCTTGTTGGCTGGCTTaGTGCCAGAGCTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAACWLA*CQSCLY
Trigger: GTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCTTGTTGGCTGGCTTaGTGCCAGAGCTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGACWLA*CQSCLY
Trigger: GTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGTCACTGTTATTTTaGCCGGGATGGGGACTTCAG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWSLLF*PGWGLQ
Trigger: CTGAAGTCCCCATCCCGGCCAAAATAACAGTGACCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCACTGTCACAGTGCCTaGCTTGTGCACTGTGATGAT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGHCHSA*LVHCDD
Trigger: ATCATCACAGTGCACAAGTCAGGCACTGTGACAGTG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCCCAGTGGCCACACTaGTCCGGATCACGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPQWPH*SGSRQG
Trigger: CCCCTGCCGTGATCCGGATCAGTGTGGCCACTGGGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCATGGCAGCGGTGCTaGCCGCATGGCTGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSWQRC*PHGCGA
Trigger: GGCGCCACAGCCATGCGGTCAGCACCGCTGCCATGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCCCGTGCCCCCGTTTaGAGTAGCGGTGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECARAPV*SSGGGR
Trigger: ACGGCCACCACCGCTACTTCAAACGGGGGCACGGGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGGGGTCTGGGAGGCTaGCAGGACCTCGGCGGACTC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRGLGG*QDLGGL
Trigger: GAGTCCGCCGAGGTCCTGTCAGCCTCCCAGACCCCT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGAGTGGGCTCCAAGGTaGCTAAACGTGACATTTTCC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGEWAPR*LNVTFS
Trigger: GGAAAATGTCACGTTTAGTCACCTTGGAGCCCACTC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGCCGCAGCGGCCAGTaGGGCCATCCCACTCATCTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGRSGQ*GHPTHL
Trigger: CAGATGAGTGGGATGGCCGCACTGGCCGCTGCGGCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGATCACGGCAGGGGTaGCAGCTGCACAGGCCCGAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGSRQG*QLHRPD
Trigger: GTCGGGCCTGTGCAGCTGGCACCCCTGCCGTGATCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCCGACTGCAGAAGCTaGCGTGGCGGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECADCRS*RGGSCW
Trigger: CCAGCAGCTGCCGCCACGGCAGCTTCTGCAGTCGGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTATAGTCAGGGACGGTaGCCAAATCATCGTCTGATG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGYSQGR*PNHRLM
Trigger: CATCAGACGATGATTTGGGCACCGTCCCTGACTATA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTCTTTACTGGTTTCCTaGAGCCACCTCACTTGTGTG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSLLVS*SHLTCV
Trigger: CACACAAGTGAGGTGGCTGCAGGAAACCAGTAAAGA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTTTCCTCCCCTCCATaGCTGCCCCCGACCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLSSPP*LPPTWP
Trigger: GGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCACCGCTGGCAAGTTaGCGGGCGACACGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECAPLAS*RATRPK
Trigger: CTTCGGCCGTGTCGCCCGCCAACTTGCCAGCGGTGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGACAAGCCAGCGTGTTaGTACACTTCCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGDKPAC*YTSTPS
Trigger: AGAAGGAGTGGAAGTGTACCAACACGCTGGCTTGTC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGTGTATCCATCAGGATaGTCTCCCAGGCCATGGTAT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGVYPSG*SPRPWY
Trigger: ATACCATGGCCTGGGAGACCATCCTGATGGATACAC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGGTGCGGCTGCTGCTaGGGCAGGGCTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRCGCC*GRALGR
Trigger: CCTCCCAAGAGCCCTGCCCCAGCAGCAGCCGCACCT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTCACTTTGCCCAGATTaGAAATCAGAGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSLCPD*KSEHCL
Trigger: GAGGCAGTGCTCTGATTTCCAATCTGGGCAAAGTGA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAAGTCTGAACTGGTTTaGTCTGGACCACCGACATCA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGKSELV*SGPPTS
Trigger: TGATGTCGGTGGTCCAGACCAAACCAGTTCAGACTT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCGCCCCGGCAAGGCTaGTGGAGACGGTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPPRQG*WRRCLS
Trigger: TGACAGGCACCGTCTCCACCAGCCTTGCCGGGGCGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCGACGGGCATCTCGCTaGTGGTTGGCGCCGACGCTC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRRASR*WLAPTL
Trigger: GAGCGTCGGCGCCAACCACCAGCGAGATGCCCGTCG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAAGGTCCTTAATGCTTaGGCTGCTCAGCCTGACTTT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGKVLNA*AAQPDF
Trigger: AAAGTCAGGCTGAGCAGCCCAAGCATTAAGGACCTT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGCCCACCCTCGGGCTaGCCCGTGCCCCCGTTTGAA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECCPPSG*PVPPFE
Trigger: TTCAAACGGGGGCACGGGCCAGCCCGAGGGTGGGCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGCCCGGGACCGGTGTaGACTGCGTCACGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGPGPV*TASRWS
Trigger: TGACCACCGTGACGCAGTCCACACCGGTCCCGGGCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCACCTGGAGTTCCTCTaGGGGCGGCACAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECHLEFL*GRHRGA
Trigger: GGCCCCTCTGTGCCGCCCCCAGAGGAACTCCAGGTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGACCTGGCGACACCTaGAGTTCCTCTGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGPGDT*SSSGGG
Trigger: GCCGCCCCCAGAGGAACTCCAGGTGTCGCCAGGTCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTGCAGAAGCTGCCGTaGCGGCAGCTGCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLQKLP*RQLLAR
Trigger: CCTCGCCAGCAGCTGCCGCCACGGCAGCTTCTGCAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCTGGACCACCACAGTaGCCACCACCGCAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECAGPPQ*PPPQSR
Trigger: CCGGCTCTGCGGTGGTGGCCACTGTGGTGGTCCAGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTCGGCCATTAGCTCTTaGGGAAGTGATAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSAISS*GSDNWS
Trigger: AGACCAGTTATCACTTCCCCAAGAGCTAATGGCCGA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGGATGGCCAGGGCCTaGGCTTCCTCCGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECWMARA*ASSVAA
Trigger: CGCAGCCACGGAGGAAGCCCAGGCCCTGGCCATCCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGCTGCTGCTGGGCCTaGGCCTCCTGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECCCCWA*ASCSCC
Trigger: GCAGCAGCTGCAGGAGGCCCAGGCCCAGCAGCAGCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCAGCTTGGCTGGGCTaGCCACCACAACCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECAAWLG*PPQPAG
Trigger: CCCAGCCGGTTGTGGTGGCCAGCCCAGCCAAGCTGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACAGAGCTGTCTTTACTaGTTTCCTGCAGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAQSCLY*FPAATS
Trigger: TGAGGTGGCTGCAGGAAACCAGTAAAGACAGCTCTG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGCAGATTTCATTTCTaGAGAGGACATGGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSRFHF*RGHGPL
Trigger: AAGCGGCCCATGTCCTCTCCAGAAATGAAATCTGCT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGGAGGGGTGGGCCCTaGCGGGTGTTCCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGRGGP*RVFLKQ
Trigger: CTGCTTCAGGAACACCCGCCAGGGCCCACCCCTCCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGAGGCGCCACCCCGCTaGGACTGGGCTTATTCCACG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECEAPPR*DWAYST
Trigger: CGTGGAATAAGCCCAGTCTCAGCGGGGTGGCGCCTC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCACAGCAGGGACACCTTaGGTCCTGGCTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECTAGTP*VLAAVG
Trigger: GCCCACCGCAGCCAGGACTCAAGGTGTCCCTGCTGT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTCTCCACCTCTCCCTaGTCGCTGGCAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLSTSP*SLAAGG
Trigger: CCCACCTGCTGCCAGCGATCAGGGAGAGGTGGAGAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCAGTGGGGAGGTGGTaGTGCTGCTGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSVGRW*CCCWAW
Trigger: CCAGGCCCAGCAGCAGCATCACCACCTCCCCACTGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGGCTGAGATTTCGCTaGAGGGCCCCCGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRLRFR*RAPGHR
Trigger: CCTGTGGCCGGGGGCCCTTCAGCGAAATCTCAGCCT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGGGTGGCTCCCAGGTaGGGTGAGCACCATCCGGAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRVAPR*GEHHPD
Trigger: GTCCGGATGGTGCTCACCTCACCTGGGAGCCACCCT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGTTTTTGGGCGTCTTTaGTTTGAGTCTCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGVFGRL*FESLPL
Trigger: GAGTGGAAGAGACTCAAAGCAAAGACGCCCAAAAAC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGGACCGGTGTGGACTaGGTCACGGTGGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGTGVD*VTVVTA
Trigger: GGCTGTGACCACCGTGACGCAGTCCACACCGGTCCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCTGTGGAAGCCGACTaGAGAAGCTGCCGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECAVEAD*RSCRGG
Trigger: GCCGCCACGGCAGCTTCTGCAGTCGGCTTCCACAGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGCGGCCTGGGCAGCTaGTTCTGCAGCAGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECCGLGS*FCSSRH
Trigger: GTGACGGCTGCTGCAGAAGCAGCTGCCCAGGCCGCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATATAGTCAGGGACGGTaGCCAAATCATCGTCTGATG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAYSQGR*PNHRLM
Trigger: CATCAGACGATGATTTGGGCACCGTCCCTGACTATA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTCTTTACTGGTTTCCTaGAGCCACCTCACTTGTGTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSLLVS*SHLTCV
Trigger: CACACAAGTGAGGTGGCTGCAGGAAACCAGTAAAGA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGTTGGCAGTGCGGCCTaGAGGGAGGTCTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECVGSAA*REVCTG
Trigger: GCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAAC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTTTTATTTCCGATGGTaGTTGCCGAGTGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGFYFRW*LPSGDC
Trigger: GCAGTCTCCACTCGGCAACCACCATCGGAAATAAAA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATTTTATTTCCGATGGTaGTTGCCGAGTGGAGACTGC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAFYFRW*LPSGDC
Trigger: GCAGTCTCCACTCGGCAACCACCATCGGAAATAAAA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTGGGGCAGGGCTCTTaGGAGGGTTGGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLGQGS*EGWQAQ
Trigger: CTGTGCCTGCCAACCCTCCCAAGAGCCCTGCCCCAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCACTTTGCCCAGATTaGAAATCAGAGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASLCPD*KSEHCL
Trigger: GAGGCAGTGCTCTGATTTCCAATCTGGGCAAAGTGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCAAGTCTGAACTGGTTTaGTCTGGACCACCGACATCA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGKSELV*SGPPTS
Trigger: TGATGTCGGTGGTCCAGACCAAACCAGTTCAGACTT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCGTGCCGGGCTTGGTaGTACTGGGGGAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSCRAW*YWGRRC
Trigger: GCAGCGTCTCCCCCAGTACCACCAAGCCCGGCACGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGGTCGTGCCGGGCTTaGTGGTACTGGGGGAGACGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECWSCRA*WYWGRR
Trigger: GCGTCTCCCCCAGTACCACCAAGCCCGGCACGACCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCCCGGCAAGGCTGGTaGAGACGGTGCCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPRQGW*RRCLSL
Trigger: CAGTGACAGGCACCGTCTCCACCAGCCTTGCCGGGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTGCCGCTGTCAGCGTaGTCTGTGCGGCCGACACAG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLPLSA*SVRPTQ
Trigger: CTGTGTCGGCCGCACAGACCACGCTGACAGCGGCAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCAGTCATGGTGGTGCTaGTCGCGCTGGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECQSWWC*SRWSGG
Trigger: CCCGCCAGACCAGCGCGACCAGCACCACCATGACTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGCACGGGGCCCCGGTaGCCATCACAGTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSTGPR*PSQSWW
Trigger: CCACCATGACTGTGATGGCCACCGGGGCCCCGTGCT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCAGTCACTGTGGTGCTaGGCGAGCCACCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECQSLWC*ASHPGG
Trigger: GCCTCCAGGGTGGCTCGCCCAGCACCACAGTGACTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGAGCCGGCAGACTCCTaGCCCGAAGATGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECEPADS*PEDGSP
Trigger: AGGGGAGCCATCTTCGGGCCAGGAGTCTGCCGGCTC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTGTGTGGGTGGGGGTaGCTGGACCACCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLCGWG*LDHHSG
Trigger: GCCACTGTGGTGGTCCAGCCACCCCCACCCACACAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGGGAAGTGATAACTaGTCTACTTCGGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWGSDN*STSDCV
Trigger: CACACAGTCCGAAGTAGACCAGTTATCACTTCCCCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGGGGAAGTGATAACTaGTCTACTTCGGACTGTGTG +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAWGSDN*STSDCV
Trigger: CACACAGTCCGAAGTAGACCAGTTATCACTTCCCCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTCGGCCATTAGCTCTTaGGGAAGTGATAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSAISS*GSDNWS
Trigger: AGACCAGTTATCACTTCCCCAAGAGCTAATGGCCGA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGAGCCAGGCTCTCAGTaGCCGTTGAGGGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECEPGSQ*PLRAAA
Trigger: CGCTGCTGCCCTCAACGGCCACTGAGAGCCTGGCTC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCATGGGGGCTTTGCTaGGTGGGGGCGGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSWGLC*VGAAGL
Trigger: CAGACCTGCCGCCCCCACCCAGCAAAGCCCCCATGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGACAGCATCATCTGGTaGCAGGAAATAGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGDSIIW*QEIVCH
Trigger: GTGACACACTATTTCCTGCCACCAGATGATGCTGTC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGACAGCATCATCTGGTaGCAGGAAATAGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNADSIIW*QEIVCH
Trigger: GTGACACACTATTTCCTGCCACCAGATGATGCTGTC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGGGACAGCATCATCTaGTGGCAGGAAATAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAWDSII*WQEIVC
Trigger: ACACACTATTTCCTGCCACCAGATGATGCTGTCCCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGCAGATTTCATTTCTaGAGAGGACATGGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASRFHF*RGHGPL
Trigger: AAGCGGCCCATGTCCTCTCCAGAAATGAAATCTGCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGGAAGTTAGGTGACTaGAAACACAAGGGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGKLGD*KHKGKK
Trigger: TTTCTTCCCCTTGTGTTTCCAGTCACCTAACTTCCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCACCAGCAGCCCTGTTTaGGAGGCGGTGCCGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECTSSPV*EAVPVV
Trigger: CACCACCGGCACCGCCTCCCAAACAGGGCTGCTGGT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGGGAGGTGGAGCAGTaGCTGCGGAAACCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGEVEQ*LRKPAA
Trigger: GGCTGCTGGTTTCCGCAGCCACTGCTCCACCTCCCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCAATGGCTGGGTCGTTaGGACTGTCGGCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECQWLGR*DCRQGP
Trigger: TGGCCCCTGCCGACAGTCTCAACGACCCAGCCATTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGAAAGGGGAGAGGAGTaGACAGCGGCTCGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECERGEE*TAAREG
Trigger: ACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTTTTTGGGCGTCTTTaGTTTGAGTCTCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVFGRL*FESLPL
Trigger: GAGTGGAAGAGACTCAAAGCAAAGACGCCCAAAAAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCCGCCCCACTGGCCTaGGTGGTAGTGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPAPLA*VVVMMV
Trigger: CACCATCATCACTACCACGCAGGCCAGTGGGGCGGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGCTGGTGGAGACGGTaGCTGTCACTGTGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGWWRR*LSLCLG
Trigger: CCCTAGGCACAGTGACAGGCACCGTCTCCACCAGCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCGCCTGAGTCACGGTTaGTGCTGCCTCGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRLSHG*CCLGGV
Trigger: GACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGGGTGAAGTGCGAATaGTGGGACGGGGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRVKCE*WDGVGG
Trigger: CCCTCCCACCCCGTCCCAGCATTCGCACTTCACCCT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCACACCCAGGCCAGGGTaGCAGGAAAGCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECTPRPG*QESHSG
Trigger: CCCAGAGTGGCTTTCCTGGCACCCTGGCCTGGGTGT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGCAGCAGTTGGCAGTaGGGCCTGCAGGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECCSSWQ*GLQGGL
Trigger: CAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTGCAGAAGCACCGCTaGCAAGTTGGCGGGCGACAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLQKHR*QVGGRH
Trigger: GTGTCGCCCGCCAACTTGCCAGCGGTGCTTCTGCAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCACCGATGTCCCCACCTaGGCGGCTGCAGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECTDVPT*AAAVFS
Trigger: GCTGAAGACTGCAGCCGCCCAGGTGGGGACATCGGT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGACCCGTGGACGCCTaGCCTGTGACTGCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGPVDA*PVTAEV
Trigger: GACTTCAGCAGTCACAGGCCAGGCGTCCACGGGTCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCGAACTGCACTTGGGTaGGCTGGGGGTGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRTALG*AGGVPQ
Trigger: TTGGGGGACACCCCCAGCCCACCCAAGTGCAGTTCG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCATCTCGCTGGTGGTTaGCGCCGACGCTCGACATGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECHLAGG*RRRSTW
Trigger: CCATGTCGAGCGTCGGCGCCAACCACCAGCGAGATG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTGCTGGCGAGGACCTaGCGACACCTGGAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLLART*RHLEFL
Trigger: GAGGAACTCCAGGTGTCGCCAGGTCCTCGCCAGCAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTCCTGGCCCGAAGATaGCTCCCCTGTGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLLARR*LPCAAQ
Trigger: CTGAGCAGCACAGGGGAGCCATCTTCGGGCCAGGAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTTCGGACTGTGTGGGTaGGGGTGGCTGGACCACCAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECFGLCG*GWLDHH
Trigger: GTGGTGGTCCAGCCACCCCCACCCACACAGTCCGAA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTGCAGCCTGCAGCTTaGCTGGGCTGGCCACCACAA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLQPAA*LGWPPQ
Trigger: TTGTGGTGGCCAGCCCAGCCAAGCTGCAGGCTGCAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGGCGTTGGAAAGGCTaGAGGACTGCACCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGRWKG*RTAPGR
Trigger: CCTGCCTGGTGCAGTCCTCCAGCCTTTCCAACGCCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGGCCGCTTGTTGGCTaGCTTGGTGCCAGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGPLVG*LGARAV
Trigger: GACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGTGAAGTGCGAATGCTaGGACGGGGTGGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECVKCEC*DGVGGV
Trigger: CACCCCTCCCACCCCGTCCCAGCATTCGCACTTCAC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGGAAGTTAGGTGACTaGAAACACAAGGGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGKLGD*KHKGKK
Trigger: TTTCTTCCCCTTGTGTTTCCAGTCACCTAACTTCCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTGCACAGCTGCTGCTaGTGGCCTGCTCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLHSCC*WPAPLP
Trigger: GGGCAATGGAGCAGGCCACCAGCAGCAGCTGTGCAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTTTCTGTGTTGGCTATaGTCACTGTTATTTTGGCCG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGFLCWL*SLLFWP
Trigger: CGGCCAAAATAACAGTGACCATAGCCAACACAGAAA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGGCACTGGAGCTGGTaGTGTTCACGCTGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECWHWSW*CSRCRP
Trigger: AGGGCGACAGCGTGAACATCACCAGCTCCAGTGCCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGCTCCCAGGTGAGGTaGGCACCATCCGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGSQVR*APSGLL
Trigger: CAAAAGTCCGGATGGTGCTCACCTCACCTGGGAGCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGTTCGTAGAGGTCATTaGTGTATTTCCCATACTCCA +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGVRRGH*CISHTP
Trigger: TGGAGTATGGGAAATACAGCAATGACCTCTACGAAC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGGGTCACTCCCTGCTaGCCGTGGCCAGTGGCAATT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECWVTPC*PWPVAI
Trigger: AATTGCCACTGGCCACGGGCAGCAGGGAGTGACCCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCACAGTCATGGTGGTaGTGGTCGCGCTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSQSWW*WSRWSG
Trigger: GCCAGACCAGCGCGACCAGCACCACCATGACTGTGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAAGATGGCTCCCCTGTaGTGCTCAGATCCACGGCGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECKMAPL*CSDPRR
Trigger: CCGCCGTGGATCTGAGCAGCACAGGGGAGCCATCTT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGTCACGGTTGCTGCTaGCTCGGAGGTGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSHGCC*LGGVHG
Trigger: CCCATGGACACCTCCGAGGCAGCAGCAACCGTGACT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTCATTCAGGTACCTTaGAATGTTGTTCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVIQVP*NVVLWV
Trigger: GACCCAAAGAACAACATTCCAAGGTACCTGAATGAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTTGGCAAGACCTGGATaGTGGTGGTGGTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLARPG*WWWSGV
Trigger: CACCCCCGACCACCACCACCATCCAGGTCTTGCCAA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCACCGTTGGCAAGACCTaGATGGTGGTGGTGGTCGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECTVGKT*MVVVVG
Trigger: CCCGACCACCACCACCATCCAGGTCTTGCCAACGGT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCTGCCAGGCACCGTTaGCAAGACCTGGATGGTGGT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECAARHR*QDLDGG
Trigger: ACCACCATCCAGGTCTTGCCAACGGTGCCTGGCAGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCGGTGGGCACAGAAATaGAGCTGCCAGGCACCGTTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRWAQK*SCQAPL
Trigger: CAACGGTGCCTGGCAGCTCCATTTCTGTGCCCACCG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCACCACCTGGGCTTGCTaGGCCACTGTCACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECTTWAC*ATVTVP
Trigger: AGGCACTGTGACAGTGGCCCAGCAAGCCCAGGTGGT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCACTCCCTGCTGCCCGTaGCCAGTGGCAATTTTGGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECTPCCP*PVAILG
Trigger: CCCCAAAATTGCCACTGGCCACGGGCAGCAGGGAGT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCAGAGTTACCTGGGTaGGCTGGGACACGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSELPG*AGTRAA
Trigger: TGCAGCCCGTGTCCCAGCCCACCCAGGTAACTCTGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGTGATCAGAGTTACCTaGGTGGGCTGGGACACGGGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECVIRVT*VGWDTG
Trigger: GCCCGTGTCCCAGCCCACCCAGGTAACTCTGATCAC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGGTCATGCACAGGCTaGGCCTCCACCCCACTAGGT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRSCTG*ASTPLG
Trigger: ACCTAGTGGGGTGGAGGCCCAGCCTGTGCATGACCT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGCTGCACATCACCCTaGCCTGAGTCGGCGATGGTA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGCTSP*PESAMV
Trigger: TACCATCGCCGACTCAGGCCAGGGTGATGTGCAGCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGGCGGGTTTGGCACTaGGACTTAGAGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECWRVWH*DLEPWA
Trigger: AGCCCAGGGCTCTAAGTCCCAGTGCCAAACCCGCCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCCTGTGGGAAGAAGTaGCGTCGGGAAGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSCGKK*RREAGH
Trigger: GTGCCCTGCTTCCCGACGCCACTTCTTCCCACAGGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCCCCATCAGGGCTGTaGAAGCCGACTGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPPSGL*KPTAEA
Trigger: AGCTTCTGCAGTCGGCTTCCACAGCCCTGATGGGGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGTGGTGGTGCCAGCTTaGGCCTCGGCCATTAGCTCT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECVVVPA*ASAISS
Trigger: AGAGCTAATGGCCGAGGCCCAAGCTGGCACCACCAC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCAATGGGTATGGTGGTaGCCTGGCCCTCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECQWVWW*PGPPDP
Trigger: AGGGTCAGGAGGGCCAGGCCACCACCATACCCATTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCACAATGGGTATGGTaGTGGCCTGGCCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECAQWVW*WPGPPD
Trigger: GTCAGGAGGGCCAGGCCACCACCATACCCATTGTGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCCACCACAACCGGCTaGGGGGCCACAAATGTGTTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECATTTG*GATNVL
Trigger: CAACACATTTGTGGCCCCCCAGCCGGTTGTGGTGGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCAGCCTGTGAGCTCTaGATGGCCAGGTACACGGAG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPACEL*MARYTE
Trigger: CTCCGTGTACCTGGCCATCCAGAGCTCACAGGCTGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGCCTTAGATTTCTTTaGAGCAGATTTCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGLRFL*SRFHFW
Trigger: CCAGAAATGAAATCTGCTCCAAAGAAATCTAAGGCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGGACGCCTGGCCTGTaGCTGCTGAAGTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECWTPGL*LLKSEL
Trigger: CAGTTCAGACTTCAGCAGTCACAGGCCAGGCGTCCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGGCTTGCCATCTGCTaGGGTCACCAGCTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGLAIC*GHQLQD
Trigger: ATCCTGAAGCTGGTGACCTCAGCAGATGGCAAGCCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCACATCACCCTGGCCTaGGTCGGCGATGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECHITLA*VGDGNC
Trigger: ACAGTTACCATCGCCGACTCAGGCCAGGGTGATGTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCCGGCCACAGGCATTaGTTCCGGCAACACGAAACT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPGHRH*FRQHET
Trigger: AGTTTCGTGTTGCCGGAATCAATGCCTGTGGCCGGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGCCGCCATCTTAACTaGCCTCCTTCCCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGRHLN*PPSLWL
Trigger: GAGCCAAAGGGAAGGAGGGCAGTTAAGATGGCGGCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCACTATTCCCTCGTTaGCGCCGCCAAACACCACGA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPLFPR*RRQTPR
Trigger: TCGTGGTGTTTGGCGGCGGCAACGAGGGAATAGTGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTGAGTCACGGTTGCTaGTGCCTCGGAGGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLSHGC*CLGGVH
Trigger: ATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGGGCAGCCAGCTCCTaGTGTGTCAGCACAATGGGT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRAASS*CVSTMG
Trigger: ACCCATTGTGCTGACACAGCAGGAGCTGGCTGCCCT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCACCCAGGGACTCGATaGCATTGGCCACTTCGGTCA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECHPGTR*HWPLRS
Trigger: TGACCGAAGTGGCCAATGGCATCGAGTCCCTGGGTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCATGGTGGTTGCCGAGTaGAGACTGCGAGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECMVVAE*RLRGRG
Trigger: GCCTCTTCCTCGCAGTCTCCACTCGGCAACCACCAT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCCTTGCAGCAGACCTaGTTGTTCCAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSLQQT*LFQALR
Trigger: CCGCAAGGCCTGGAACAACCAGGTCTGCTGCAAGGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGCGTGATGCCTACTTaGGTCAGCGGCTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSVMPT*VSGCTA
Trigger: TGCTGTGCAGCCGCTGACCCAAGTAGGCATCACGCT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGACACCTTGAGTCCTaGCTGCGGTGGGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGHLES*LRWAQK
Trigger: TTTCTGTGCCCACCGCAGCCAGGACTCAAGGTGTCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCATGGTCTTCACGATaGTGGTACCCGCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPWSSR*WYPLGH
Trigger: GTGTCCCAGCGGGTACCACCATCGTGAAGACCATGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGTTGCTCACCATGACTaGCGAGGAGGCCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECVAHHD*RGGHLH
Trigger: GTGAAGGTGGCCTCCTCGCCAGTCATGGTGAGCAAC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCAGAGCACTGCCTCCTaGGACAGAGATGGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECQSTAS*DRDGAL
Trigger: AAGAGCCCCATCTCTGTCCCAGGAGGCAGTGCTCTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGCCTTAGATTTCTTTaGAGCAGATTTCATTTCTGG +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGLRFL*SRFHFW
Trigger: CCAGAAATGAAATCTGCTCCAAAGAAATCTAAGGCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCACGATTTGGGGGAGGTaGAGCAGTGGCTGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECTIWGR*SSGCGN
Trigger: GTTTCCGCAGCCACTGCTCCACCTCCCCCAAATCGT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCGGTAGGGGAGGGCTaGAAAGATTGGCTGCTCGGT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSVGEG*KDWLLG
Trigger: ACCGAGCAGCCAATCTTTCCAGCCCTCCCCTACCGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGGGCGTCTTTGCTTTaGGTCTCTTCCACTCCCACC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECWASLL*VSSTPT
Trigger: GGTGGGAGTGGAAGAGACTCAAAGCAAAGACGCCCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGGCAGGTCGCATGGTaGCCAATGGAGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECWQVAW*PMEFLL
Trigger: CAACAGGAACTCCATTGGTCACCATGCGACCTGCCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGCCGGCCAGCTCATTaGGGCAATTGCTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECCRPAH*GNCSQW
Trigger: CCATTGAGAGCAATTGCCTCAATGAGCTGGCCGGCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCACGTCTTAAAGGCTaGGATTTCGCTGAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECARLKG*DFAEGP
Trigger: GGGCCCTTCAGCGAAATCTCAGCCTTTAAGACGTGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGTACCAGAGGTCCTTaGAGCAGACCTGGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECGTRGP*SRPGCS
Trigger: GGAACAACCAGGTCTGCTGCAAGGACCTCTGGTACC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCATCTGTGGGCTACTaGCAATCACCGTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSSVGY*QSPFPG
Trigger: CCCAGGGAACGGTGATTGGCAGTAGCCCACAGATGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCTCGACCCTATAGATaGGGAGTGATCGCCCATGAG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECARPYR*GVIAHE
Trigger: CTCATGGGCGATCACTCCGCATCTATAGGGTCGAGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCGTAGATCACCAGCTTaGACTTCTTATTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRRSPA*TSYCLF
Trigger: AAAAAGACAATAAGAAGTCCAAGCTGGTGATCTACG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCAGGGAGTTGGTGTTaGCGCGTACCAGTTGTACTC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPGSWC*RVPVVL
Trigger: GAGTACAACTGGTACGCGCCAACACCAACTCCCTGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGTGGGGTTGATCACCTaGCTTGAGAGGGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECVGLIT*LERVAM
Trigger: CATTGCCACCCTCTCAAGCCAGGTGATCAACCCCAC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTTTCTGGAGAGGACATaGGCCGCTTGTTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECFLERT*AACWLA
Trigger: AGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGTTCCTGTTGTAGCCTaGGGACCGGTCACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECVPVVA*GPVTLR
Trigger: TCTCAAAGTGACCGGTCCTCAGGCTACAACAGGAAC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTGGCCTGTGACTGCTaGAGTCTGAACTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLACDC*SLNWFG
Trigger: ACCAAACCAGTTCAGACTTCAGCAGTCACAGGCCAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGGTGCTCCAGTTCCTaGAGTCATCACCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECRCSSS*SHHLGG
Trigger: ACCACCAAGGTGATGACTTCAGGAACTGGAGCACCT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCTATAGATGCGGAGTaGTCGCCCATGAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPIDAE*SPMRNE
Trigger: CTCATTCCTCATGGGCGATCACTCCGCATCTATAGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCACAAGAGAAGCAGCTaGCTCCTGTCTGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECHKRSS*LLSVTD
Trigger: GTCTGTGACAGACAGGAGGCAGCTGCTTCTCTTGTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGAAACTTATAGGCTGTaGCTGGCTGCAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECETYRL*LAAAPA
Trigger: AGCAGGAGCTGCAGCCAGGCACAGCCTATAAGTTTC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCTTGCTGGCAAGCCTTaGTCCTCGACAGAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECLAGKP*SSTEVW
Trigger: CCAAACTTCTGTCGAGGAGCAAGGCTTGCCAGCAAG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCAGGTGTCACAGCCATaGTCTTCACGATGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECQVSQP*SSRWWY
Trigger: GTACCACCATCGTGAAGACCATGGCTGTGACACCTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCATTGCTCTCAATGGCTaGGTCGTTGAGACTGTCGGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECIALNG*VVETVG
Trigger: GCCGACAGTCTCAACGACCCAGCCATTGAGAGCAAT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCACAAATGTGTTGGATaGAGCCAGGCTCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECHKCVG*SQALSG
Trigger: GCCACTGAGAGCCTGGCTCCATCCAACACATTTGTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR TCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGAGTGGGCTCCAAGGTaGCTAAACGTGACATTTTCC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECEWAPR*LNVTFS
Trigger: GGAAAATGTCACGTTTAGTCACCTTGGAGCCCACTC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCGCATGGTGACCAATaGAGTTCCTGTTGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSHGDQ*SSCCSL
Trigger: CAGGCTACAACAGGAACTCCATTGGTCACCATGCGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCAGAGCTGTCTTTACTaGTTTCCTGCAGCCACCTCA +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECQSCLY*FPAATS
Trigger: TGAGGTGGCTGCAGGAAACCAGTAAAGACAGCTCTG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR GCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCACCGACATCACTTTaGCCAGATTGGAAATCAGAG +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECPPTSL*PDWKSE
Trigger: CTCTGATTTCCAATCTGGGCAAAGTGATGTCGGTGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAAGGTCCTTAATGCTTaGGCTGCTCAGCCTGACTTT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECKVLNA*AAQPDF
Trigger: AAAGTCAGGCTGAGCAGCCCAAGCATTAAGGACCTT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCGGCCATTAGCTCTTaGGGAAGTGATAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECSAISS*GSDNWS
Trigger: AGACCAGTTATCACTTCCCCAAGAGCTAATGGCCGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGACAGCATCATCTGGTaGCAGGAAATAGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECDSIIW*QEIVCH
Trigger: GTGACACACTATTTCCTGCCACCAGATGATGCTGTC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGGGACAGCATCATCTaGTGGCAGGAAATAGTGTGT +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECWDSII*WQEIVC
Trigger: ACACACTATTTCCTGCCACCAGATGATGCTGTCCCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGTCATTCAGGTACCTTaGAATGTTGTTCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: KEKGERSEQRLARVKCECVIQVP*NVVLWV
Trigger: GACCCAAAGAACAACATTCCAAGGTACCTGAATGAC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp GATGAGCTCCTTGATGGCCACGGCGCGGTGGCCGTGGCGGGGCCGTaGCACCGGACCCGACCAGCCCACCACTCGCTTCCAGCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: DELLDGHGAVAVAGP*HRTRPAHHSLPAGL
Trigger: CAGCCCCGCTGGAAGCGAGTGGTGGGCTGGTCGGGTCCGGTGCCACGGCCCCGCCACGGCCACCGCGCCGTGGCCATCAAGGAGCTCATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp CCGCCGCCAAACACCACGATGAGCTCCTTGATGGCCACGGCGCGGTaGCCGTGGCGGGGCCGTGGCACCGGACCCGACCAGCCCACCACT +
Preference number: 5 (lower is better)
Translates to: PPPNTTMSSLMATAR*PWRGRGTGPDQPTT
Trigger: AGTGGTGGGCTGGTCGGGTCCGGTGCCACGGCCCCGCCACGGCCACCGCGCCGTGGCCATCAAGGAGCTCATCGTGGTGTTTGGCGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp CCATGCTCGGCCCAAGGAGTGGGCCGGCCGAGCACGGGGCCCCGGTaGCCATCACAGTCATGGTGGTGCTGGTCGCGCTGGTCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: PCSAQGVGRPSTGPR*PSQSWWCWSRWSGG
Trigger: CCCGCCAGACCAGCGCGACCAGCACCACCATGACTGTGATGGCCACCGGGGCCCCGTGCTCGGCCGGCCCACTCCTTGGGCCGAGCATGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCTCTCGAGGGCCGTTaGGGGGCTCGCGCCGTACGG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGALEGR*GARAVR
Trigger: CCGTACGGCGCGAGCCCCCAAACGGCCCTCGAGAGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS GCA 90 bp CGTGGCACCGGACCCGACCAGCCCACCACTCGCTTCCAGCGGGGCTaGAGAAGCACCGCTGGCAAGTTGGCGGGCGACACGGCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: RGTGPDQPTTRFQRG*RSTAGKLAGDTAEA
Trigger: GGCTTCGGCCGTGTCGCCCGCCAACTTGCCAGCGGTGCTTCTGCAGCCCCGCTGGAAGCGAGTGGTGGGCTGGTCGGGTCCGGTGCCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCCGGGGTGGAGCTCTaGAGCTCGCCCCCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAGVEL*SSPPAC
Trigger: ACAGGCTGGGGGCGAGCTCAAGAGCTCCACCCCGGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 90 bp GCAGCCCCGCCGGCGCTCAGACCACAATTGTGGGAGCCGCCATCTTaGGACCGTCCCGCTTCCCCGCCCAGCGCCTTAGTGCAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: AAPPALRPQLWEPPS*DRPASPPSALVQPP
Trigger: CGGCGGCTGCACTAAGGCGCTGGGCGGGGAAGCGGGACGGTCTCAAGATGGCGGCTCCCACAATTGTGGTCTGAGCGCCGGCGGGGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS GCA 90 bp CGCCCCAGTGGCCACACTGATCCGGATCACGGCAGGGGTGCCAGCTaGACAGGCCCGACGGGCATCTCGCTGGTGGTTGGCGCCGACGCT +
Preference number: 5 (lower is better)
Translates to: RPSGHTDPDHGRGAS*TGPTGISLVVGADA
Trigger: AGCGTCGGCGCCAACCACCAGCGAGATGCCCGTCGGGCCTGTGCAGCTGGCACCCCTGCCGTGATCCGGATCAGTGTGGCCACTGGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 90 bp CTCGGCCGACAGGTGCCCCAGCTCCGCCTGAGTCACGGTTGCTGCTaGCTCGGAGGTGTCCATGGGCTCGCCGGTGCCCATGACGGCCTG +
Preference number: 5 (lower is better)
Translates to: LGRQVPQLRLSHGCC*LGGVHGLAGAHDGL
Trigger: CAGGCCGTCATGGGCACCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTGTCGGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS GCA 90 bp ACCCTCGGCCGACAGGTGCCCCAGCTCCGCCTGAGTCACGGTTGCTaGTGCCTCGGAGGTGTCCATGGGCTCGCCGGTGCCCATGACGGC +
Preference number: 5 (lower is better)
Translates to: TLGRQVPQLRLSHGC*CLGGVHGLAGAHDG
Trigger: GCCGTCATGGGCACCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTGTCGGCCGAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS GCA 90 bp CTCGGCCGACAGGTGCCCCAGCTCCGCCTGAGTCACGGTTGCTGCTaGCTCGGAGGTGTCCATGGGCTCGCCGGTGCCTGCCATGACGGC +
Preference number: 5 (lower is better)
Translates to: LGRQVPQLRLSHGCC*LGGVHGLAGACHDG
Trigger: GCCGTCATGGCAGGCACCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTGTCGGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369984.4
ENST00000444191.5
CDS CCA 90 bp GGAGTGGGCCGGCCGAGCACGGGGCCCCGGTGGCCATCACAGTCATaGTGGTGCTGGTCGCGCTGGTCTGGCGGGTTTGGCACTGGGACT +
Preference number: 5 (lower is better)
Translates to: GVGRPSTGPRWPSQS*WCWSRWSGGFGTGT
Trigger: AGTCCCAGTGCCAAACCCGCCAGACCAGCGCGACCAGCACCACCATGACTGTGATGGCCACCGGGGCCCCGTGCTCGGCCGGCCCACTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGCTGCCCGGCCATGTaGGAGGTGGCGGTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNACCPAM*EVAVVA
Trigger: CGCCACCACCGCCACCTCCAACATGGCCGGGCAGCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCCGGGGTGGAGCTCTaGAGCTCGCCCCCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAGVEL*SSPPAC
Trigger: ACAGGCTGGGGGCGAGCTCAAGAGCTCCACCCCGGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 90 bp CTCGCGCCTCTCCCCTTAGTCCGCCTCTGCTGCTCAGGCTGCGCCTaGCGCCGTGGGAGCCGCCATCTTGAGACTAGCTCCCCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: LAPLPLVRLCCSGCA*RRGSRHLETSSPFP
Trigger: GGGGAACGGGGAGCTAGTCTCAAGATGGCGGCTCCCACGGCGGCAGGCGCAGCCTGAGCAGCAGAGGCGGACTAAGGGGAGAGGCGCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS GCA 90 bp CACTGTGGTGCTGGGCGAGCCACCCTGGAGGCTCTCGCACACAGGTaGCATGCGGGGCTCCCCAGCACCCACGCTGGAACGGGTCATGGC +
Preference number: 5 (lower is better)
Translates to: HCGAGRATLEALAHR*HAGLPSTHAGTGHG
Trigger: GCCATGACCCGTTCCAGCGTGGGTGCTGGGGAGCCCCGCATGGCACCTGTGTGCGAGAGCCTCCAGGGTGGCTCGCCCAGCACCACAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 90 bp CTGACCCTCGGCCGACAGGTGCCCCAGCTCCGCCTGAGTCACGGTTaGTGCTGCCTCGGAGGTGTCCATGGGCTCGCCGGTGCCCATGAC +
Preference number: 5 (lower is better)
Translates to: LTLGRQVPQLRLSHG*CCLGGVHGLAGAHD
Trigger: GTCATGGGCACCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTGTCGGCCGAGGGTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS GCA 90 bp ACCCTCGGCCGACAGGTGCCCCAGCTCCGCCTGAGTCACGGTTGCTaGTGCCTCGGAGGTGTCCATGGGCTCGCCGGTGCCTGCCATGAC +
Preference number: 5 (lower is better)
Translates to: TLGRQVPQLRLSHGC*CLGGVHGLAGACHD
Trigger: GTCATGGCAGGCACCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTGTCGGCCGAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369984.4
ENST00000444191.5
CDS GCA 90 bp CTGACCCTCGGCCGACAGGTGCCCCAGCTCCGCCTGAGTCACGGTTaGTGCTGCCTCGGAGGTGTCCATGGGCTCGCCGGTGCCTGCCAT +
Preference number: 5 (lower is better)
Translates to: LTLGRQVPQLRLSHG*CCLGGVHGLAGACH
Trigger: ATGGCAGGCACCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTGTCGGCCGAGGGTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369984.4
ENST00000444191.5
CDS CCA 90 bp GCCTCCAGGGCTGTCACAGTCACTGTGGTGCTGGGCGAGCCACCCTaGAGGCTCTCGCACACAGGTGCCATGCGGGGCTCCCCAGCACCC +
Preference number: 5 (lower is better)
Translates to: ASRAVTVTVVLGEPP*RLSHTGAMRGSPAP
Trigger: GGGTGCTGGGGAGCCCCGCATGGCACCTGTGTGCGAGAGCCTCCAGGGTGGCTCGCCCAGCACCACAGTGACTGTGACAGCCCTGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp CACACCCTCTGTGTTGGGAAAGGAGCCAGCAGCGCGGTGCCAGCCTaGGGGGTGACGCTGGGTGCCGCCGCCACCTCTAGGCCAGACTCC +
Preference number: 5 (lower is better)
Translates to: HTLCVGKGASSAVPA*GVTLGAAATSRPDS
Trigger: GGAGTCTGGCCTAGAGGTGGCGGCGGCACCCAGCGTCACCCCCCAGGCTGGCACCGCGCTGCTGGCTCCTTTCCCAACACAGAGGGTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp CCTGGAGTTCCTCTGGGGGCGGCACAGAGGGGCCCGGGACCGGTGTaGACTGCGTCACGGTGGTCACAGCCCGCGTCAGTGTGGAGGACA +
Preference number: 5 (lower is better)
Translates to: PGVPLGAAQRGPGPV*TASRWSQPASVWRT
Trigger: TGTCCTCCACACTGACGCGGGCTGTGACCACCGTGACGCAGTCCACACCGGTCCCGGGCCCCTCTGTGCCGCCCCCAGAGGAACTCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000444191.5
CDS CCA 90 bp CACAGTGGCCACCACCGCAGAGCCGGCAGACTCCTGGCCCGAAGATaGCTCCCCTGTGCTGCTCAGATCCACGGCGGCCGGGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: HSGHHRRAGRLLARR*LPCAAQIHGGRELR
Trigger: CCTGAGCTCCCGGCCGCCGTGGATCTGAGCAGCACAGGGGAGCCATCTTCGGGCCAGGAGTCTGCCGGCTCTGCGGTGGTGGCCACTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 90 bp GGCTGGACCACCACAGTGGCCACCACCGCAGAGCCGGCAGACTCCTaGCCCGAAGATGGCTCCCCTGTGCTGCTCAGATCCACGGCGGCC +
Preference number: 5 (lower is better)
Translates to: GWTTTVATTAEPADS*PEDGSPVLLRSTAA
Trigger: GGCCGCCGTGGATCTGAGCAGCACAGGGGAGCCATCTTCGGGCCAGGAGTCTGCCGGCTCTGCGGTGGTGGCCACTGTGGTGGTCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTGGGAGCCGCCATCTaGAGACCGTCCCGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVGAAI*RPSRFP
Trigger: GGGGAAGCGGGACGGTCTCAAGATGGCGGCTCCCAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACGTCGCCCCGACTACTaGTCCGGGCGCTCCCGCTTA +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARRPDY*SGRSRL
Trigger: TAAGCGGGAGCGCCCGGACAAGTAGTCGGGGCGACG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGCACCGCTGGCAAGTaGGCGGGCGACACGGCCGAA +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASTAGK*AGDTAE
Trigger: TTCGGCCGTGTCGCCCGCCAACTTGCCAGCGGTGCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGTTGGCGCGTACCAGTaGTACTCGGGCTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGVGAYQ*YSGWGW
Trigger: CCACCCCCAGCCCGAGTACAACTGGTACGCGCCAAC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCTGGGGCAGGGCTCTaGGGAGGGTTGGCAGGCACA +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAAGAGL*GGLAGT
Trigger: TGTGCCTGCCAACCCTCCCAAGAGCCCTGCCCCAGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGTGGTGACGGCTGGCTaGACGGCGGAGACGGTGACG +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGVVTAG*TAETVT
Trigger: CGTCACCGTCTCCGCCGTCAAGCCAGCCGTCACCAC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTGGTGACGGCTGGCTaGACGGCGGAGACGGTGACG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVVTAG*TAETVT
Trigger: CGTCACCGTCTCCGCCGTCAAGCCAGCCGTCACCAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCGCCTGAGTCACGGTaGCTGCTGCCTCGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGPPESR*LLPRRC
Trigger: ACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCTGCAGCCACCTCACTaGTGTGGCCGGGCCATAGCC +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLQPPH*CGRAIA
Trigger: GGCTATGGCCCGGCCACACAAGTGAGGTGGCTGCAG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 90 bp TCGTTGAGACTGTCGGCAGGGGCCAGGGCCTCAGTGGGGAGGTGGTaGTGCTGCTGCTGGGCCTGGGCCTCCTGCAGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SLRLSAGARASVGRW*CCCWAWASCSCCCC
Trigger: GCAGCAGCAGCAGCTGCAGGAGGCCCAGGCCCAGCAGCAGCATCACCACCTCCCCACTGAGGCCCTGGCCCCTGCCGACAGTCTCAACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 90 bp AGTTCCTCTGGGGGCGGCACAGAGGGGCCCGGGACCGGTGTGGACTaGGTCACGGTGGTCACAGCCCGCGTCAGTGTGGAGGACACGGTT +
Preference number: 5 (lower is better)
Translates to: SSSGGGTEGPGTGVD*VTVVTARVSVEDTV
Trigger: AACCGTGTCCTCCACACTGACGCGGGCTGTGACCACCGTGACGCAGTCCACACCGGTCCCGGGCCCCTCTGTGCCGCCCCCAGAGGAACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000444191.5
CDS GCA 90 bp TCGGCGGACTCCCCCATCAGGGCTGTGGAAGCCGACTGCAGAAGCTaGCGTGGCGGCAGCTGCTGGCGAGGACCTGGCGACACCTGGAGT +
Preference number: 5 (lower is better)
Translates to: SADSPIRAVEADCRS*RGGSCWRGPGDTWS
Trigger: ACTCCAGGTGTCGCCAGGTCCTCGCCAGCAGCTGCCGCCACGGCAGCTTCTGCAGTCGGCTTCCACAGCCCTGATGGGGGAGTCCGCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 90 bp AACAGCCTCGACACACCTAACGAATGGAGGCGGGCCGGAGGCCGGTaGAACCAGCTCGAGCTCTCGAGGGCCGTTTGGGGGCTCGCGCCG +
Preference number: 5 (lower is better)
Translates to: NSLDTPNEWRRAGGR*NQLELSRAVWGLAP
Trigger: CGGCGCGAGCCCCCAAACGGCCCTCGAGAGCTCGAGCTGGTTCCACCGGCCTCCGGCCCGCCTCCATTCGTTAGGTGTGTCGAGGCTGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS CCA 90 bp ACGCTGGGTGCCGCCGCCACCTCTAGGCCAGACTCCACGGTCCTGTaGGAAGAAGTGGCGTCGGGAAGCAGGGCACCCACGCTGACCGAC +
Preference number: 5 (lower is better)
Translates to: TLGAAATSRPDSTVL*EEVASGSRAPTLTD
Trigger: GTCGGTCAGCGTGGGTGCCCTGCTTCCCGACGCCACTTCTTCCCACAGGACCGTGGAGTCTGGCCTAGAGGTGGCGGCGGCACCCAGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTTGGCGCGTACCAGTaGTACTCGGGCTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVGAYQ*YSGWGW
Trigger: CCACCCCCAGCCCGAGTACAACTGGTACGCGCCAAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGAGCGTGATGCCTACTaGGGTCAGCGGCTGCACAGC +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGERDAY*GQRLHS
Trigger: GCTGTGCAGCCGCTGACCCAAGTAGGCATCACGCTC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAACAGCAGGGACACCTaGAGTCCTGGCTGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGNSRDT*SPGCGG
Trigger: CCCACCGCAGCCAGGACTCAAGGTGTCCCTGCTGTT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGGCGGGTAGACGTGTaGGTGGCGGAGGAAACCGAT +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGRVDV*VAEETD
Trigger: ATCGGTTTCCTCCGCCACCAACACGTCTACCCGCCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCATCTCGCTGGTGGTaGGCGCCGACGCTCGACATG +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGASRWW*APTLDM
Trigger: CATGTCGAGCGTCGGCGCCAACCACCAGCGAGATGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCTGGTCTGGCGGGTTaGGCACTGGGACTTAGAGCC +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAGLAG*ALGLRA
Trigger: GGCTCTAAGTCCCAGTGCCAAACCCGCCAGACCAGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATGGGTTGGAGCAGACTaGGGTCACGGTGGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAWVGAD*GHGGRG
Trigger: CCCTCGGCCACCGTGACCCAAGTCTGCTCCAACCCA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCGCCTGAGTCACGGTaGCTGCTGCCTCGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPPESR*LLPRRC
Trigger: ACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACTGCAGCCACCTCACTaGTGTGGCCGGGCCATAGCC +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALQPPH*CGRAIA
Trigger: GGCTATGGCCCGGCCACACAAGTGAGGTGGCTGCAG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTGCAGCCACCTCACTaGTGTGGCCGGGCCATAGCC +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLQPPH*CGRAIA
Trigger: GGCTATGGCCCGGCCACACAAGTGAGGTGGCTGCAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCAACCAGCAGCCCTGTTaGGGAGGCGGTGCCGGTGGT +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGNQQPC*GGGAGG
Trigger: ACCACCGGCACCGCCTCCCAAACAGGGCTGCTGGTT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAACCAGCAGCCCTGTTaGGGAGGCGGTGCCGGTGGT +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNANQQPC*GGGAGG
Trigger: ACCACCGGCACCGCCTCCCAAACAGGGCTGCTGGTT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 90 bp CTCGAGCTCTCGAGGGCCGTTTGGGGGCTCGCGCCGTACGGCTTGTaGAGTCTCGCGCCTCTCCCCTTAGTCCGCCTCTGCTGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LELSRAVWGLAPYGL*SLAPLPLVRLCCSG
Trigger: GCCTGAGCAGCAGAGGCGGACTAAGGGGAGAGGCGCGAGACTTCACAAGCCGTACGGCGCGAGCCCCCAAACGGCCCTCGAGAGCTCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS CCA 90 bp CCGCAAGAGCCGCCCGAAACTGTCGAGCGCCTAGGCTCAAGAAGCTaGAGGCCGCTGAGTCCCGTCGCCCCGACTACTTGTCCGGGCGCT +
Preference number: 5 (lower is better)
Translates to: PQEPPETVERLGSRS*RPLSPVAPTTCPGA
Trigger: AGCGCCCGGACAAGTAGTCGGGGCGACGGGACTCAGCGGCCTCCAGCTTCTTGAGCCTAGGCGCTCGACAGTTTCGGGCGGCTCTTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp ACGGCAGGGGTGCCAGCTGCACAGGCCCGACGGGCATCTCGCTGGTaGTTGGCGCCGACGCTCGACATGGCTGTAGTGGCAGTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: TAGVPAAQARRASRW*LAPTLDMAVVAVLV
Trigger: CACCAACACTGCCACTACAGCCATGTCGAGCGTCGGCGCCAACCACCAGCGAGATGCCCGTCGGGCCTGTGCAGCTGGCACCCCTGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp CTGGTCGCGCTGGTCTGGCGGGTTTGGCACTGGGACTTAGAGCCCTaGGCTGCCTCCAGCGCCCCAGTGGCCACACTGATCCGGATCACG +
Preference number: 5 (lower is better)
Translates to: LVALVWRVWHWDLEP*AASSAPVATLIRIT
Trigger: CGTGATCCGGATCAGTGTGGCCACTGGGGCGCTGGAGGCAGCCCAGGGCTCTAAGTCCCAGTGCCAAACCCGCCAGACCAGCGCGACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp GCCCCGGTGGCCATCACAGTCATGGTGGTGCTGGTCGCGCTGGTCTaGCGGGTTTGGCACTGGGACTTAGAGCCCTGGGCTGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: APVAITVMVVLVALV*RVWHWDLEPWAASS
Trigger: GCTGGAGGCAGCCCAGGGCTCTAAGTCCCAGTGCCAAACCCGCCAGACCAGCGCGACCAGCACCACCATGACTGTGATGGCCACCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp AGGGCACCCACGCTGACCGACATGGTGGTGCCAGTGGAAGTGGTCTaGTGTGTCTCACAGGGGCGACCAGCAGGGGGCTGCTGCCCACCC +
Preference number: 5 (lower is better)
Translates to: RAPTLTDMVVPVEVV*CVSQGRPAGGCCPP
Trigger: GGGTGGGCAGCAGCCCCCTGCTGGTCGCCCCTGTGAGACACACCAGACCACTTCCACTGGCACCACCATGTCGGTCAGCGTGGGTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp GGACTCCCCCATCAGGGCTGTGGAAGCCGACTGCAGAAGCTGCCGTaGCGGCAGCTGCTGGCGAGGACCTGGCGACACCTGGAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: GLPHQGCGSRLQKLP*RQLLARTWRHLEFL
Trigger: GAGGAACTCCAGGTGTCGCCAGGTCCTCGCCAGCAGCTGCCGCCACGGCAGCTTCTGCAGTCGGCTTCCACAGCCCTGATGGGGGAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 90 bp GCACCAGGGCAGCCAGCTCCTGCTGTGTCAGCACAATGGGTATGGTaGTGGCCTGGCCCTCCTGACCCTCGGCCGACAGGTGCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: APGQPAPAVSAQWVW*WPGPPDPRPTGAPA
Trigger: AGCTGGGGCACCTGTCGGCCGAGGGTCAGGAGGGCCAGGCCACCACCATACCCATTGTGCTGACACAGCAGGAGCTGGCTGCCCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 90 bp GCTGCACCAGGGCAGCCAGCTCCTGCTGTGTCAGCACAATGGGTATaGTGGTGGCCTGGCCCTCCTGACCCTCGGCCGACAGGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: AAPGQPAPAVSAQWV*WWPGPPDPRPTGAP
Trigger: TGGGGCACCTGTCGGCCGAGGGTCAGGAGGGCCAGGCCACCACCATACCCATTGTGCTGACACAGCAGGAGCTGGCTGCCCTGGTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGGTCCTCGCTATCATaGGCCAGACCCCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGSSLS*ARPPNR
Trigger: CCTGTTTGGGGGTCTGGCCAATGATAGCGAGGACCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGCTGCCAGGCACCGTaGGCAAGACCTGGATGGTGG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASCQAP*ARPGWW
Trigger: CCACCATCCAGGTCTTGCCAACGGTGCCTGGCAGCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAACAGCAGGGACACCTaGAGTCCTGGCTGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNANSRDT*SPGCGG
Trigger: CCCACCGCAGCCAGGACTCAAGGTGTCCCTGCTGTT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCATGCGAGTGGCAGGGTaGCTCACCATGACTGGCGAG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGMRVAG*LTMTGE
Trigger: CTCGCCAGTCATGGTGAGCAACCCTGCCACTCGCAT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGTCACCACCTGGGCTaGCTGGGCCACTGTCACAGT +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGHHLG*LGHCHS
Trigger: ACTGTGACAGTGGCCCAGCAAGCCCAGGTGGTGACC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGTCACCACCTGGGCTaGCTGGGCCACTGTCACAGT +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGHHLG*LGHCHS
Trigger: ACTGTGACAGTGGCCCAGCAAGCCCAGGTGGTGACC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTCACCAGCTTCAGGATaGTTCCCGCTGGCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSPASG*FPLAGA
Trigger: GGCCCCTGCCAGCGGGAACAATCCTGAAGCTGGTGA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCACCAGCTTCAGGATaGTTCCCGCTGGCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASPASG*FPLAGA
Trigger: GGCCCCTGCCAGCGGGAACAATCCTGAAGCTGGTGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCTGGTCTGGCGGGTTaGGCACTGGGACTTAGAGCC +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAAGLAG*ALGLRA
Trigger: GGCTCTAAGTCCCAGTGCCAAACCCGCCAGACCAGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGCACACCCTCTGTGTaGGGAAAGGAGCCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSTPSV*GKEPAA
Trigger: CGCTGCTGGCTCCTTTCCCAACACAGAGGGTGTGCT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCAATGGCTGGGTCGTaGAGACTGTCGGCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASMAGS*RLSAGA
Trigger: GGCCCCTGCCGACAGTCTCAACGACCCAGCCATTGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTCAATGGCTGGGTCGTaGAGACTGTCGGCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSMAGS*RLSAGA
Trigger: GGCCCCTGCCGACAGTCTCAACGACCCAGCCATTGA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCCCGGCCACAGGCATaGATTCCGGCAACACGAAAC +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGPRPQA*IPATRN
Trigger: GTTTCGTGTTGCCGGAATCAATGCCTGTGGCCGGGG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGAGGACATGGGCCGCTaGTTGGCTGGCTTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGEDMGR*LAGLVP
Trigger: TGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGAGGACATGGGCCGCTaGTTGGCTGGCTTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAEDMGR*LAGLVP
Trigger: TGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCAACAAATGCAGCAGTaGGCAGTGCGGCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGQQMQQ*AVRPAG
Trigger: CCCTGCAGGCCGCACTGCCAACTGCTGCATTTGTTG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 90 bp TGGGTTGGAGCAGACTTGGGTCACGGTGGCCGAGGGGCACAGCAGTaGCTCCAGGGCTGTCACAGTCACTGTGGTGCTGGGCGAGCCACC +
Preference number: 5 (lower is better)
Translates to: WVGADLGHGGRGAQQ*LQGCHSHCGAGRAT
Trigger: GGTGGCTCGCCCAGCACCACAGTGACTGTGACAGCCCTGGAGGCACTGCTGTGCCCCTCGGCCACCGTGACCCAAGTCTGCTCCAACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 90 bp CACACCCAGGGACTCGATGCCATTGGCCACTTCGGTCAGGGTAGCTaGAGCCTGCAGCTTGGCTGGGCTGGCCACCACAACCGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: HTQGLDAIGHFGQGS*SLQLGWAGHHNRLG
Trigger: CCCCAGCCGGTTGTGGTGGCCAGCCCAGCCAAGCTGCAGGCTGCAGCTACCCTGACCGAAGTGGCCAATGGCATCGAGTCCCTGGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 90 bp ATCACGGCAGGGGTGCCAGCTGCACAGGCCCGACGGGCATCTCGCTaGTGGTTGGCGCCGACGCTCGACATGGCTGTAGTGGCAGTGTTG +
Preference number: 5 (lower is better)
Translates to: ITAGVPAAQARRASR*WLAPTLDMAVVAVL
Trigger: CAACACTGCCACTACAGCCATGTCGAGCGTCGGCGCCAACCACCAGCGAGATGCCCGTCGGGCCTGTGCAGCTGGCACCCCTGCCGTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp ACAGTCATGGTGGTGCTGGTCGCGCTGGTCTGGCGGGTTTGGCACTaGGACTTAGAGCCCTGGGCTGCCTCCAGCGCCCCAGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: TVMVVLVALVWRVWH*DLEPWAASSAPVAT
Trigger: TGTGGCCACTGGGGCGCTGGAGGCAGCCCAGGGCTCTAAGTCCCAGTGCCAAACCCGCCAGACCAGCGCGACCAGCACCACCATGACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp GCCATCACAGTCATGGTGGTGCTGGTCGCGCTGGTCTGGCGGGTTTaGCACTGGGACTTAGAGCCCTGGGCTGCCTCCAGCGCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: AITVMVVLVALVWRV*HWDLEPWAASSAPV
Trigger: CACTGGGGCGCTGGAGGCAGCCCAGGGCTCTAAGTCCCAGTGCCAAACCCGCCAGACCAGCGCGACCAGCACCACCATGACTGTGATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp CCCACGCTGGAACGGGTCATGGCAGCGGTGCTGACCGCATGGCTGTaGCGCCCCGCAGGAAGGTCCTTAATGCTTGGGCTGCTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PTLERVMAAVLTAWL*RPAGRSLMLGLLSL
Trigger: CAGGCTGAGCAGCCCAAGCATTAAGGACCTTCCTGCGGGGCGCCACAGCCATGCGGTCAGCACCGCTGCCATGACCCGTTCCAGCGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp CCAGCACCCACGCTGGAACGGGTCATGGCAGCGGTGCTGACCGCATaGCTGTGGCGCCCCGCAGGAAGGTCCTTAATGCTTGGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: PAPTLERVMAAVLTA*LWRPAGRSLMLGLL
Trigger: GAGCAGCCCAAGCATTAAGGACCTTCCTGCGGGGCGCCACAGCCATGCGGTCAGCACCGCTGCCATGACCCGTTCCAGCGTGGGTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp GCTGCTGCTGCACCAGGGCAGCCAGCTCCTGCTGTGTCAGCACAATaGGTATGGTGGTGGCCTGGCCCTCCTGACCCTCGGCCGACAGGT +
Preference number: 5 (lower is better)
Translates to: AAAAPGQPAPAVSAQ*VWWWPGPPDPRPTG
Trigger: ACCTGTCGGCCGAGGGTCAGGAGGGCCAGGCCACCACCATACCCATTGTGCTGACACAGCAGGAGCTGGCTGCCCTGGTGCAGCAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCCACTATTCCCTCGTaGCCGCCGCCAAACACCACG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASTIPS*PPPNTT
Trigger: CGTGGTGTTTGGCGGCGGCAACGAGGGAATAGTGGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGAGGGGGCCCGTTTTaGGGCGTCTTTGCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGGGPF*GVFALS
Trigger: ACTCAAAGCAAAGACGCCCAAAAACGGGCCCCCTCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGGTCCTCGCTATCATaGGCCAGACCCCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGSSLS*ARPPNR
Trigger: CCTGTTTGGGGGTCTGGCCAATGATAGCGAGGACCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCGAGCACGGGGGATGTaGTCCTCCAGTGTATCCATC +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGRARGM*SSSVSI
Trigger: GATGGATACACTGGAGGACAACATCCCCCGTGCTCG...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAATGTACAGGCGGGTGTaGATGGCGACTGCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAMYRRV*MATAQW
Trigger: CCACTGCGCAGTCGCCATCAACACCCGCCTGTACAT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCTCACCTCCAGGGAGTaGGTGTTGGCGCGTACCAGT +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLTSRE*VLARTS
Trigger: ACTGGTACGCGCCAACACCAACTCCCTGGAGGTGAG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCACAGATGGGACCGGATaGGGTGTAGGGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGTDGTG*GVGEVA
Trigger: TGCCACCTCCCCTACACCCAATCCGGTCCCATCTGT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAACAGATGGGACCGGATaGGGTGTAGGGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNATDGTG*GVGEVA
Trigger: TGCCACCTCCCCTACACCCAATCCGGTCCCATCTGT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCTGGGCACTCTGTGTaGGCACAACCATCCGCACTC +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPGHSV*AQPSAL
Trigger: GAGTGCGGATGGTTGTGCCAACACAGAGTGCCCAGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCTGGGCACTCTGTGTaGGCACAACCATCCGCACTC +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPGHSV*AQPSAL
Trigger: GAGTGCGGATGGTTGTGCCAACACAGAGTGCCCAGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAATGCGAGTGGCAGGGTaGCTCACCATGACTGGCGAG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAMRVAG*LTMTGE
Trigger: CTCGCCAGTCATGGTGAGCAACCCTGCCACTCGCAT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCACCAGGGTGATGGTCTaGGTGACCCCGCCCACAACT +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGTRVMV*VTPPTT
Trigger: AGTTGTGGGCGGGGTCACCAAGACCATCACCCTGGT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAACCAGGGTGATGGTCTaGGTGACCCCGCCCACAACT +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNATRVMV*VTPPTT
Trigger: AGTTGTGGGCGGGGTCACCAAGACCATCACCCTGGT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCATGATGGTGGTGGGCTaGCCATCTGCTGAGGTCACC +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGMMVVG*PSAEVT
Trigger: GGTGACCTCAGCAGATGGCAAGCCCACCACCATCAT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGTGATGGCAGTGGGGTaGATCACCTGGCTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGVMAVG*ITWLER
Trigger: CCTCTCAAGCCAGGTGATCAACCCCACTGCCATCAC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCAGCACACCCTCTGTGTaGGGAAAGGAGCCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGSTPSV*GKEPAA
Trigger: CGCTGCTGGCTCCTTTCCCAACACAGAGGGTGTGCT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACCCCGGCCACAGGCATaGATTCCGGCAACACGAAAC +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAPRPQA*IPATRN
Trigger: GTTTCGTGTTGCCGGAATCAATGCCTGTGGCCGGGG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACAACAAATGCAGCAGTaGGCAGTGCGGCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAQQMQQ*AVRPAG
Trigger: CCCTGCAGGCCGCACTGCCAACTGCTGCATTTGTTG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 90 bp CTGGGACACGGGCTGCATGGTGATGGTTGGGGTTGTGAGCCCGCCTaGCGCTGTCAGCGTGGTCTGTGCGGCCGACACAGTGATGGCAGT +
Preference number: 5 (lower is better)
Translates to: LGHGLHGDGWGCEPA*RCQRGLCGRHSDGS
Trigger: ACTGCCATCACTGTGTCGGCCGCACAGACCACGCTGACAGCGGCAGGCGGGCTCACAACCCCAACCATCACCATGCAGCCCGTGTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp GGGCGGGTAGACGTGTTGGTGGCGGAGGAAACCGATGTCCCCACCTaGGCGGCTGCAGTCTTCAGCATGCGAGTGGCAGGGTTGCTCACC +
Preference number: 5 (lower is better)
Translates to: GRVDVLVAEETDVPT*AAAVFSMRVAGLLT
Trigger: GGTGAGCAACCCTGCCACTCGCATGCTGAAGACTGCAGCCGCCCAGGTGGGGACATCGGTTTCCTCCGCCACCAACACGTCTACCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp GTAGCTGCAGCCTGCAGCTTGGCTGGGCTGGCCACCACAACCGGCTaGGGGGCCACAAATGTGTTGGATGGAGCCAGGCTCTCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: VAAACSLAGLATTTG*GATNVLDGARLSVA
Trigger: GGCCACTGAGAGCCTGGCTCCATCCAACACATTTGTGGCCCCCCAGCCGGTTGTGGTGGCCAGCCCAGCCAAGCTGCAGGCTGCAGCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGTTGGTTGCCGTGTaGTACACGTGCAGTTCGTCC +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWLVAV*YTCSSS
Trigger: GGACGAACTGCACGTGTACAACACGGCAACCAACCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGGATGAACCACTGGTaGGTTGCCGTGTTGTACACG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGMNHW*VAVLYT
Trigger: CGTGTACAACACGGCAACCAACCAGTGGTTCATCCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGAGGGGGCCCGTTTTaGGGCGTCTTTGCTTTGAGT +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGGGPF*GVFALS
Trigger: ACTCAAAGCAAAGACGCCCAAAAACGGGCCCCCTCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGCCATGGTATCCAGGTaGAGACAAGCCAGCGTGTTG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGAMVSR*RQASVL
Trigger: CAACACGCTGGCTTGTCTCAACCTGGATACCATGGC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCACGAGCACGGGGGATGTaGTCCTCCAGTGTATCCATC +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARARGM*SSSVSI
Trigger: GATGGATACACTGGAGGACAACATCCCCCGTGCTCG...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTCCAGGGAGTTGGTGTaGGCGCGTACCAGTTGTACT +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSRELV*ARTSCT
Trigger: AGTACAACTGGTACGCGCCAACACCAACTCCCTGGA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAATGGTGATGGGGGACTaGATGCCAGGACTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAMVMGD*MPGLLV
Trigger: GACCAGCAGTCCTGGCATCAAGTCCCCCATCACCAT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGTGATGGCAGTGGGGTaGATCACCTGGCTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGVMAVG*ITWLER
Trigger: CCTCTCAAGCCAGGTGATCAACCCCACTGCCATCAC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTCTCACATGGTGGGTaGGAGCAGACTTGGGTCACG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVSHGG*EQTWVT
Trigger: CGTGACCCAAGTCTGCTCCAACCCACCATGTGAGAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGTCTCACATGGTGGGTaGGAGCAGACTTGGGTCACG +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGVSHGG*EQTWVT
Trigger: CGTGACCCAAGTCTGCTCCAACCCACCATGTGAGAC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGTGCCGGCCAGCTCATaGAGGCAATTGCTCTCAATG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGVPASS*RQLLSM
Trigger: CATTGAGAGCAATTGCCTCAATGAGCTGGCCGGCAC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGGGACTCGATGCCATaGGCCACTTCGGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARDSMP*ATSVRV
Trigger: TACCCTGACCGAAGTGGCCAATGGCATCGAGTCCCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGGAGGGCTGGAAAGATaGGCTGCTCGGTTCAAATCC +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGGGLER*AARFKS
Trigger: GGATTTGAACCGAGCAGCCAATCTTTCCAGCCCTCC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 90 bp CCTTGCGGTAGCCGTCACGCCCACTCCAAATGTACAGGCGGGTGTTaGTGGCGACTGCGCAGTGGCCAGCCCGAGCACGGGGGATGTTGT +
Preference number: 5 (lower is better)
Translates to: PCGSRHAHSKCTGGC*WRLRSGQPEHGGCC
Trigger: ACAACATCCCCCGTGCTCGGGCTGGCCACTGCGCAGTCGCCATCAACACCCGCCTGTACATTTGGAGTGGGCGTGACGGCTACCGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000461098.1
CDS TCA 90 bp GGCCAGCTGGGCCGGGGTGGAGCTCTTGAGCTCGCCCCCAGCCTGTaGGCTCTGGATGGCCAGGTACACGGAGTACTCGATAATCTTGCC +
Preference number: 5 (lower is better)
Translates to: GQLGRGGALELAPSL*ALDGQVHGVLDNLA
Trigger: GGCAAGATTATCGAGTACTCCGTGTACCTGGCCATCCAGAGCTCACAGGCTGGGGGCGAGCTCAAGAGCTCCACCCCGGCCCAGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 90 bp GCCGTCACGCCCACTCCAAATGTACAGGCGGGTGTTGATGGCGACTaGGCAGTGGCCAGCCCGAGCACGGGGGATGTTGTCCTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: AVTPTPNVQAGVDGD*AVASPSTGDVVLQC
Trigger: ACACTGGAGGACAACATCCCCCGTGCTCGGGCTGGCCACTGCGCAGTCGCCATCAACACCCGCCTGTACATTTGGAGTGGGCGTGACGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000461098.1
CDS GCA 90 bp CAGGGACACCTTGAGTCCTGGCTGCGGTGGGCACAGAAATGGAGCTaGCAGGCACCGTTGGCAAGACCTGGATGGTGGTGGTGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: QGHLESWLRWAQKWS*QAPLARPGWWWWSG
Trigger: CCCCGACCACCACCACCATCCAGGTCTTGCCAACGGTGCCTGGCAGCTCCATTTCTGTGCCCACCGCAGCCAGGACTCAAGGTGTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 90 bp CTGCTGATGCCCAGGATGGTGGGCTTGGTCCCCGCCCCACTGGCCTaGGTGGTAGTGATGATGGTGGTGGGCTTGCCATCTGCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: LLMPRMVGLVPAPLA*VVVMMVVGLPSAEV
Trigger: GACCTCAGCAGATGGCAAGCCCACCACCATCATCACTACCACGCAGGCCAGTGGGGCGGGGACCAAGCCCACCATCCTGGGCATCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 90 bp GGACACAGGGAGGTCATGCACAGGCTGGGCCTCCACCCCACTAGGTaGCGTGATCAGAGTTACCTGGGTGGGCTGGGACACGGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: GHREVMHRLGLHPTR*RDQSYLGGLGHGLH
Trigger: ATGCAGCCCGTGTCCCAGCCCACCCAGGTAACTCTGATCACGGCACCTAGTGGGGTGGAGGCCCAGCCTGTGCATGACCTCCCTGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGGATGAACCACTGGTaGGTTGCCGTGTTGTACACG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGMNHW*VAVLYT
Trigger: CGTGTACAACACGGCAACCAACCAGTGGTTCATCCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTTGGGCGTCTTTGCTTaGAGTCTCTTCCACTCCCAC +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLGVFA*SLFHSH
Trigger: GTGGGAGTGGAAGAGACTCAAAGCAAAGACGCCCAA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATATTTCCGATGGTGGTaGCCGAGTGGAGACTGCGAG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAYFRWW*PSGDCE
Trigger: CTCGCAGTCTCCACTCGGCAACCACCATCGGAAATA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGGTACCAGAGGTCCTaGCAGCAGACCTGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNARYQRS*QQTWLF
Trigger: GAACAACCAGGTCTGCTGCAAGGACCTCTGGTACCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCAGGTACCAGAGGTCCTaGCAGCAGACCTGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGRYQRS*QQTWLF
Trigger: GAACAACCAGGTCTGCTGCAAGGACCTCTGGTACCT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGCTCATTGAGGCAATaGCTCTCAATGGCTGGGTCG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSSLRQ*LSMAGS
Trigger: CGACCCAGCCATTGAGAGCAATTGCCTCAATGAGCT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCGAGTACTCGATAATCTaGCCGGAGGTCACAGAGGGT +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGEYSII*PEVTEG
Trigger: ACCCTCTGTGACCTCCGGCAAGATTATCGAGTACTC...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGAGGGCTGGAAAGATaGGCTGCTCGGTTCAAATCC +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGGLER*AARFKS
Trigger: GGATTTGAACCGAGCAGCCAATCTTTCCAGCCCTCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGGAGGGCTGGAAAGATaGGCTGCTCGGTTCAAATCC +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGGGLER*AARFKS
Trigger: GGATTTGAACCGAGCAGCCAATCTTTCCAGCCCTCC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 90 bp CGGTCCTGTGGGAAGAAGTGGCGTCGGGAAGCAGGGCACCCACGCTaGCCGACATGGTGGTGCCAGTGGAAGTGGTCTGGTGTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: RSCGKKWRREAGHPR*PTWWCQWKWSGVSH
Trigger: GTGAGACACACCAGACCACTTCCACTGGCACCACCATGTCGGTCAGCGTGGGTGCCCTGCTTCCCGACGCCACTTCTTCCCACAGGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS TCA 90 bp TGGCCGGGCCATAGCCCTTCTCATTGCGGGCGGCGATGCGGAAGATaGTGGCGGGCTTGGTGGTGTAGTCGATGTGGGCGTTGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: WPGHSPSHCGRRCGR*WRAWWCSRCGRWKG
Trigger: GCCTTTCCAACGCCCACATCGACTACACCACCAAGCCCGCCATCATCTTCCGCATCGCCGCCCGCAATGAGAAGGGCTATGGCCCGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 90 bp ATTGATGAGATCTTCGGCACAGAGGGGCCCGGGACCGGTGTGGACTaGGTCACGGTGGTCACAGCCCGCGTCAGTGTGGAGGACACGGTT +
Preference number: 5 (lower is better)
Translates to: IDEIFGTEGPGTGVD*VTVVTARVSVEDTV
Trigger: AACCGTGTCCTCCACACTGACGCGGGCTGTGACCACCGTGACGCAGTCCACACCGGTCCCGGGCCCCTCTGTGCCGAAGATCTCATCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS CCA 90 bp GGTCGTGACACCTGTGGTGCCTTTCACAACCAACGTGGTGACGGCTaGCTTGACGGCGGAGACGGTGACGGGTGTGACCAGGCGAACACC +
Preference number: 5 (lower is better)
Translates to: GRDTCGAFHNQRGDG*LDGGDGDGCDQANT
Trigger: GGTGTTCGCCTGGTCACACCCGTCACCGTCTCCGCCGTCAAGCCAGCCGTCACCACGTTGGTTGTGAAAGGCACCACAGGTGTCACGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp TGGGCCGGGGTGGAGCTCTTGAGCTCGCCCCCAGCCTGTGAGCTCTaGATGGCCAGGTACACGGAGTACTCGATAATCTTGCCGGAGGTC +
Preference number: 5 (lower is better)
Translates to: WAGVELLSSPPACEL*MARYTEYSIILPEV
Trigger: GACCTCCGGCAAGATTATCGAGTACTCCGTGTACCTGGCCATCCAGAGCTCACAGGCTGGGGGCGAGCTCAAGAGCTCCACCCCGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 90 bp CAGTCATTGATGAGATCTTCGGCACAGAGGGGCCCGGGACCGGTGTaGACTGCGTCACGGTGGTCACAGCCCGCGTCAGTGTGGAGGACA +
Preference number: 5 (lower is better)
Translates to: QSLMRSSAQRGPGPV*TASRWSQPASVWRT
Trigger: TGTCCTCCACACTGACGCGGGCTGTGACCACCGTGACGCAGTCCACACCGGTCCCGGGCCCCTCTGTGCCGAAGATCTCATCAATGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTTGGGCGTCTTTGCTTaGAGTCTCTTCCACTCCCAC +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGLGVFA*SLFHSH
Trigger: GTGGGAGTGGAAGAGACTCAAAGCAAAGACGCCCAA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGTCACAGTGCCTGACTaGTGCACTGTGATGATAGGG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAVTVPD*CTVMIG
Trigger: CCCTATCATCACAGTGCACAAGTCAGGCACTGTGAC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGTCACAGTGCCTGACTaGTGCACTGTGATGATAGGG +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGVTVPD*CTVMIG
Trigger: CCCTATCATCACAGTGCACAAGTCAGGCACTGTGAC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGCTGCCCGGCCATGTaGGAGGTGGCGGTGGTGGCG +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECCCPAM*EVAVVA
Trigger: CGCCACCACCGCCACCTCCAACATGGCCGGGCAGCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGGTTTGAACTCATGTaGGAAGTGACAGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGWFELM*EVTVVA
Trigger: GGCCACCACTGTCACTTCCAACATGAGTTCAAACCA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGCTCATTGAGGCAATaGCTCTCAATGGCTGGGTCG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASSLRQ*LSMAGS
Trigger: CGACCCAGCCATTGAGAGCAATTGCCTCAATGAGCT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGAGTACTCGATAATCTaGCCGGAGGTCACAGAGGGT +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGEYSII*PEVTEG
Trigger: ACCCTCTGTGACCTCCGGCAAGATTATCGAGTACTC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAACTTGCTGGCAAGCCTaGCTCCTCGACAGAAGTTTG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNATCWQA*LLDRSL
Trigger: CAAACTTCTGTCGAGGAGCAAGGCTTGCCAGCAAGT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCACTTGCTGGCAAGCCTaGCTCCTCGACAGAAGTTTG +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGTCWQA*LLDRSL
Trigger: CAAACTTCTGTCGAGGAGCAAGGCTTGCCAGCAAGT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGGGCAGTCTCAGTCATaGATGAGATCTTCGGCACAG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAGQSQS*MRSSAQ
Trigger: CTGTGCCGAAGATCTCATCAATGACTGAGACTGCCC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS TCA 90 bp GGAGCACACCAAGGTGACAGTGCCAGGCTGCACATCACCCTGGCCTaGGTCGGCGATGGTAACTGTGGCGGTGGGCTGTTCTGTAGTCGG +
Preference number: 5 (lower is better)
Translates to: GAHQGDSARLHITLA*VGDGNCGGGLFCSR
Trigger: CCGACTACAGAACAGCCCACCGCCACAGTTACCATCGCCGACTCAGGCCAGGGTGATGTGCAGCCTGGCACTGTCACCTTGGTGTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 90 bp CAAGTTGGCGGGCGACACGGCCGAAGCCATAGTTCCGGGAAAGGGTaGGGTGGGGAGAAGTCAACAAGCGGGAAGGGAGCCCCTCAATTC +
Preference number: 5 (lower is better)
Translates to: QVGGRHGRSHSSGKG*GGEKSTSGKGAPQF
Trigger: GAATTGAGGGGCTCCCTTCCCGCTTGTTGACTTCTCCCCACCGCACCCTTTCCCGGAACTATGGCTTCGGCCGTGTCGCCCGCCAACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp CGCCCACTCCAAATGTACAGGCGGGTGTTGATGGCGACTGCGCAGTaGCCAGCCCGAGCACGGGGGATGTTGTCCTCCAGTGTATCCATC +
Preference number: 5 (lower is better)
Translates to: RPLQMYRRVLMATAQ*PARARGMLSSSVSI
Trigger: GATGGATACACTGGAGGACAACATCCCCCGTGCTCGGGCTGGCCACTGCGCAGTCGCCATCAACACCCGCCTGTACATTTGGAGTGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000461098.1
CDS CCA 90 bp GAACAGCAGGGACACCTTGAGTCCTGGCTGCGGTGGGCACAGAAATaGAGCTGCCAGGCACCGTTGGCAAGACCTGGATGGTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: EQQGHLESWLRWAQK*SCQAPLARPGWWWW
Trigger: CCACCACCACCATCCAGGTCTTGCCAACGGTGCCTGGCAGCTCCATTTCTGTGCCCACCGCAGCCAGGACTCAAGGTGTCCCTGCTGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp GTGGTCTGTGCGGCCGACACAGTGATGGCAGTGGGGTTGATCACCTaGCTTGAGAGGGTGGCAATGGTGCCCAAGGTGGTGATGGGCGTG +
Preference number: 5 (lower is better)
Translates to: VVCAADTVMAVGLIT*LERVAMVPKVVMGV
Trigger: CACGCCCATCACCACCTTGGGCACCATTGCCACCCTCTCAAGCCAGGTGATCAACCCCACTGCCATCACTGTGTCGGCCGCACAGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp GTAGTCGGGGAGGCCAGAATGGACACAGGGAGGTCATGCACAGGCTaGGCCTCCACCCCACTAGGTGCCGTGATCAGAGTTACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: VVGEARMDTGRSCTG*ASTPLGAVIRVTWV
Trigger: CACCCAGGTAACTCTGATCACGGCACCTAGTGGGGTGGAGGCCCAGCCTGTGCATGACCTCCCTGTGTCCATTCTGGCCTCCCCGACTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp GCAGCTGCCTCCTGTCTGTCACAGACGAACTGCACTTGGGTGGGCTaGGGGTGTCCCCCAAGGTTAGCCACAACAGTAGTGGTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: AAASCLSQTNCTWVG*GCPPRLATTVVVAV
Trigger: CACGGCCACCACTACTGTTGTGGCTAACCTTGGGGGACACCCCCAGCCCACCCAAGTGCAGTTCGTCTGTGACAGACAGGAGGCAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCGTCGCCCCGACTACTaGTCCGGGCGCTCCCGCTTA +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECRRPDY*SGRSRL
Trigger: TAAGCGGGAGCGCCCGGACAAGTAGTCGGGGCGACG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGCACCGCTGGCAAGTaGGCGGGCGACACGGCCGAA +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECSTAGK*AGDTAE
Trigger: TTCGGCCGTGTCGCCCGCCAACTTGCCAGCGGTGCT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCTGGGGCAGGGCTCTaGGGAGGGTTGGCAGGCACA +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECAGAGL*GGLAGT
Trigger: TGTGCCTGCCAACCCTCCCAAGAGCCCTGCCCCAGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCACCACCGACATCACTTaGCCCAGATTGGAAATCAGA +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGTTDIT*PRLEIR
Trigger: TCTGATTTCCAATCTGGGCAAAGTGATGTCGGTGGT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCCCTGAAGTCATCACCTaGGTGGTGATGATGGTGATG +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGPEVIT*VVMMVM
Trigger: CATCACCATCATCACCACCAAGGTGATGACTTCAGG...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGCCAGTGGCAATTTaGGGGACAGCAGTGATGATT +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWPVAI*GTAVMI
Trigger: AATCATCACTGCTGTCCCCAAAATTGCCACTGGCCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCTGGTTTGAACTCATGTaGGAAGTGACAGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGWFELM*EVTVVA
Trigger: GGCCACCACTGTCACTTCCAACATGAGTTCAAACCA...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGCTCTCAGTGGCCGTaGAGGGCAGCAGCGCCACAG +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECGSQWP*RAAAPQ
Trigger: CTGTGGCGCTGCTGCCCTCAACGGCCACTGAGAGCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTGTGTCACCATTACATaGGTGCCCTTAATGACTCCC +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGCVTIT*VPLMTP
Trigger: GGGAGTCATTAAGGGCACCAATGTAATGGTGACACA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 90 bp CGAGTCGAGGACACGGAGGGGGCCCGTTTTTGGGCGTCTTTGCTTTaGGTCTCTTCCACTCCCACCGGCTCGCCTGGAGTTCGTAGAGGT +
Preference number: 5 (lower is better)
Translates to: RVEDTEGARFWASLL*VSSTPTGSPGVRRG
Trigger: ACCTCTACGAACTCCAGGCGAGCCGGTGGGAGTGGAAGAGACTCAAAGCAAAGACGCCCAAAAACGGGCCCCCTCCGTGTCCTCGACTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 90 bp GTCTCGCAGGGCGGGTTCGAACAGACTCGGACCACGCTACCATTCTaGTGGCCCACAGTCGAGGTCACAAGAGAAGCAGCTGCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: VSQGGFEQTRTTLPF*WPTVEVTREAAASC
Trigger: ACAGGAGGCAGCTGCTTCTCTTGTGACCTCGACTGTGGGCCAGCAGAATGGTAGCGTGGTCCGAGTCTGTTCGAACCCGCCCTGCGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp AGGGTGATGGTCTTGGTGACCCCGCCCACAACTGTGGTCACCACCTaGGCTTGCTGGGCCACTGTCACAGTGCCTGACTTGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: RVMVLVTPPTTVVTT*ACWATVTVPDLCTV
Trigger: CACAGTGCACAAGTCAGGCACTGTGACAGTGGCCCAGCAAGCCCAGGTGGTGACCACAGTTGTGGGCGGGGTCACCAAGACCATCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp GGGTTGGAGCACACCAAGGTGACAGTGCCAGGCTGCACATCACCCTaGCCTGAGTCGGCGATGGTAACTGTGGCGGTGGGCTGTTCTGTA +
Preference number: 5 (lower is better)
Translates to: GLEHTKVTVPGCTSP*PESAMVTVAVGCSV
Trigger: TACAGAACAGCCCACCGCCACAGTTACCATCGCCGACTCAGGCCAGGGTGATGTGCAGCCTGGCACTGTCACCTTGGTGTGCTCCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp TCGCAGGGCGGGTTCGAACAGACTCGGACCACGCTACCATTCTGCTaGCCCACAGTCGAGGTCACAAGAGAAGCAGCTGCCTCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: SQGGFEQTRTTLPFC*PTVEVTREAAASCL
Trigger: CAGACAGGAGGCAGCTGCTTCTCTTGTGACCTCGACTGTGGGCCAGCAGAATGGTAGCGTGGTCCGAGTCTGTTCGAACCCGCCCTGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCTTGGAATGTTGTTCTTaGGGTCCTCGCTATCATTGG +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGLECCS*GPRYHW
Trigger: CCAATGATAGCGAGGACCCAAAGAACAACATTCCAA...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCATCACTTTGCCCAGATaGGAAATCAGAGCACTGCCT +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGITLPR*EIRALP
Trigger: AGGCAGTGCTCTGATTTCCAATCTGGGCAAAGTGAT...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAATCACTTTGCCCAGATaGGAAATCAGAGCACTGCCT +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAITLPR*EIRALP
Trigger: AGGCAGTGCTCTGATTTCCAATCTGGGCAAAGTGAT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCATCTCGCTGGTGGTaGGCGCCGACGCTCGACATG +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECASRWW*APTLDM
Trigger: CATGTCGAGCGTCGGCGCCAACCACCAGCGAGATGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS TCA 90 bp TGGTGGTTGCCGAGTGGAGACTGCGAGGAAGAGGCGCCACCCCGCTaGGACTGGGCTTATTCCACGTCAGGGTGTCAATATCTAGGGTCC +
Preference number: 5 (lower is better)
Translates to: WWLPSGDCEEEAPPR*DWAYSTSGCQYLGS
Trigger: GGACCCTAGATATTGACACCCTGACGTGGAATAAGCCCAGTCTCAGCGGGGTGGCGCCTCTTCCTCGCAGTCTCCACTCGGCAACCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS TCA 90 bp ACTGGCCTGCGTGGTAGTGATGATGGTGGTGGGCTTGCCATCTGCTaGGGTCACCAGCTTCAGGATTGTTCCCGCTGGCAGGGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: TGLRGSDDGGGLAIC*GHQLQDCSRWQGPF
Trigger: AAAGGGCCCCTGCCAGCGGGAACAATCCTGAAGCTGGTGACCTCAGCAGATGGCAAGCCCACCACCATCATCACTACCACGCAGGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 90 bp GTCACCACCTGGGCTTGCTGGGCCACTGTCACAGTGCCTGACTTGTaGACTGTGATGATAGGGCGGGTAGACGTGTTGGTGGCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: VTTWACWATVTVPDL*TVMIGRVDVLVAEE
Trigger: TTCCTCCGCCACCAACACGTCTACCCGCCCTATCATCACAGTGCACAAGTCAGGCACTGTGACAGTGGCCCAGCAAGCCCAGGTGGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 90 bp GCTACCATTCTGCTGGCCCACAGTCGAGGTCACAAGAGAAGCAGCTaGCTCCTGTCTGTCACAGACGAACTGCACTTGGGTGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: ATILLAHSRGHKRSS*LLSVTDELHLGGLG
Trigger: CCCCAGCCCACCCAAGTGCAGTTCGTCTGTGACAGACAGGAGGCAGCTGCTTCTCTTGTGACCTCGACTGTGGGCCAGCAGAATGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGTGGGAGCCGCCATCTaGAGACTAGCTCCCCGTTCC +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECVGAAI*RLAPRS
Trigger: GGAACGGGGAGCTAGTCTCAAGATGGCGGCTCCCAC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATTGGAATGTTGTTCTTaGGGTCCTCGCTATCATTGG +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNALECCS*GPRYHW
Trigger: CCAATGATAGCGAGGACCCAAAGAACAACATTCCAA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGAGGGCCAAGAGGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCAGTCATTCAGGTACCTaGGAATGTTGTTCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: GRAKRDAFPPLHACPRPGSHSGT*ECCSLG
Trigger: ACCCAAAGAACAACATTCCAAGGTACCTGAATGACT...GCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCCTCTTGGCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGAGCGTGATGCCTACTaGGGTCAGCGGCTGCACAGC +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECERDAY*GQRLHS
Trigger: GCTGTGCAGCCGCTGACCCAAGTAGGCATCACGCTC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGGGCGGGTAGACGTGTaGGTGGCGGAGGAAACCGAT +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECGRVDV*VAEETD
Trigger: ATCGGTTTCCTCCGCCACCAACACGTCTACCCGCCC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp TGCAGCAGTTGGCAGTGCGGCCTGCAGGGAGGTCTGCACAGGCGCTGCCCAGGCGCACCATCCGGACTTTaGCTGATTTTAATGGCACAA +
Preference number: 5 (lower is better)
Translates to: CSSWQCGLQGGLHRRCPGAPSGL*LILMAQ
Trigger: TTGTGCCATTAAAATCAGCAAAAGTCCGGATGGTGC...GCCTGGGCAGCGCCTGTGCAGACCTCCCTGCAGGCCGCACTGCCAACTGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAGCACCATCCGGACTTTaGCTGATTTTAATGGCACAA +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNAAPSGL*LILMAQ
Trigger: TTGTGCCATTAAAATCAGCAAAAGTCCGGATGGTGC...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 90 bp AACTGTGGTCACCACCTGGGCTTGCTGGGCCACTGTCACAGTGCCTaGCTTGTGCACTGTGATGATAGGGCGGGTAGACGTGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: NCGHHLGLLGHCHSA*LVHCDDRAGRRVGG
Trigger: GCCACCAACACGTCTACCCGCCCTATCATCACAGTGCACAAGTCAGGCACTGTGACAGTGGCCCAGCAAGCCCAGGTGGTGACCACAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 90 bp AGCTGCTGGCGAGGACCTGGCGACACCTGGAGTTCCTCTGGGGGCTaGAGGATGTCAACAGCAGAGAAGGGCATGTCAGAAGTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: SCWRGPGDTWSSSGG*RMSTAEKGMSEVSV
Trigger: CACAGAAACTTCTGACATGCCCTTCTCTGCTGTTGACATCCTGCAGCCCCCAGAGGAACTCCAGGTGTCGCCAGGTCCTCGCCAGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCCACTATTCCCTCGTaGCCGCCGCCAAACACCACG +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECSTIPS*PPPNTT
Trigger: CGTGGTGTTTGGCGGCGGCAACGAGGGAATAGTGGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCAAGTCATTCAGGTACCTaGGAATGTTGTTCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASHSGT*ECCSLG
Trigger: ACCCAAAGAACAACATTCCAAGGTACCTGAATGACT...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCCCGGCCACAGGCATaGATTCCGGCAACACGAAAC +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECPRPQA*IPATRN
Trigger: GTTTCGTGTTGCCGGAATCAATGCCTGTGGCCGGGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 90 bp ATGGTCTTGGTGACCCCGCCCACAACTGTGGTCACCACCTGGGCTTaGTGGGCCACTGTCACAGTGCCTGACTTGTGCACTGTGATGATA +
Preference number: 5 (lower is better)
Translates to: MVLVTPPTTVVTTWA*WATVTVPDLCTVMI
Trigger: TATCATCACAGTGCACAAGTCAGGCACTGTGACAGTGGCCCAGCAAGCCCAGGTGGTGACCACAGTTGTGGGCGGGGTCACCAAGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp ACAAGAGAAGCAGCTGCCTCCTGTCTGTCACAGACGAACTGCACTTaGGTGGGCTGGGGGTGTCCCCCAAGGTTAGCCACAACAGTAGTG +
Preference number: 5 (lower is better)
Translates to: TREAAASCLSQTNCT*VGWGCPPRLATTVV
Trigger: CACTACTGTTGTGGCTAACCTTGGGGGACACCCCCAGCCCACCCAAGTGCAGTTCGTCTGTGACAGACAGGAGGCAGCTGCTTCTCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCATGATGGTGGTGGGCTaGCCATCTGCTGAGGTCACC +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECMMVVG*PSAEVT
Trigger: GGTGACCTCAGCAGATGGCAAGCCCACCACCATCAT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCAGGGACTCGATGCCATaGGCCACTTCGGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECRDSMP*ATSVRV
Trigger: TACCCTGACCGAAGTGGCCAATGGCATCGAGTCCCT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp GGGACGCCTTTCCTCCCCTCCATGCCTGCCCCCGACCTGGCCCTCAGGAACGCATCAGAAGTTTCTGTGTaGGCTATGGTCACTGTTATT +
Preference number: 5 (lower is better)
Translates to: GTPFLPSMPAPDLALRNASEVSV*AMVTVI
Trigger: AATAACAGTGACCATAGCCAACACAGAAACTTCTGA...TGCGTTCCTGAGGGCCAGGTCGGGGGCAGGCATGGAGGGGAGGAAAGGCGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS TCA 90 bp GATGATCTGAGTCACAGGACCCGTGGACGCCTGGCCTGTGACTGCTaGAGTCTGAACTGGTTTGGTCTGGACCACCGACATCACTTTGCC +
Preference number: 5 (lower is better)
Translates to: DDLSHRTRGRLACDC*SLNWFGLDHRHHFA
Trigger: GGCAAAGTGATGTCGGTGGTCCAGACCAAACCAGTTCAGACTTCAGCAGTCACAGGCCAGGCGTCCACGGGTCCTGTGACTCAGATCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 90 bp TCCACGTCAGGGTGTCAATATCTAGGGTCCACAGGTCCCCCAGCCTaGAGCCACTCATCCCGCCGTAGATCACCAGCTTGGACTTCTTAT +
Preference number: 5 (lower is better)
Translates to: STSGCQYLGSTGPPA*SHSSRRRSPAWTSY
Trigger: ATAAGAAGTCCAAGCTGGTGATCTACGGCGGGATGAGTGGCTGCAGGCTGGGGGACCTGTGGACCCTAGATATTGACACCCTGACGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 90 bp CAGCCACCAAACACGTACATTTTATTTCCGATGGTGGTTGCCGAGTaGAGACTGCGAGGAAGAGGCGCCACCCCGCTGAGACTGGGCTTA +
Preference number: 5 (lower is better)
Translates to: QPPNTYILFPMVVAE*RLRGRGATPLRLGL
Trigger: TAAGCCCAGTCTCAGCGGGGTGGCGCCTCTTCCTCGCAGTCTCCACTCGGCAACCACCATCGGAAATAAAATGTACGTGTTTGGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTATTTCCGATGGTGGTaGCCGAGTGGAGACTGCGAG +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECYFRWW*PSGDCE
Trigger: CTCGCAGTCTCCACTCGGCAACCACCATCGGAAATA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCCAGGGAGTTGGTGTaGGCGCGTACCAGTTGTACT +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECSRELV*ARTSCT
Trigger: AGTACAACTGGTACGCGCCAACACCAACTCCCTGGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGTGCCGGCCAGCTCATaGAGGCAATTGCTCTCAATG +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECVPASS*RQLLSM
Trigger: CATTGAGAGCAATTGCCTCAATGAGCTGGCCGGCAC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCGCTTGTTGGCTGGCTaGGTGCCAGAGCTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECRLLAG*VPELSL
Trigger: TAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGCG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 90 bp GGTCCCCCAGCCTGCAGCCACTCATCCCGCCGTAGATCACCAGCTTaGACTTCTTATTGTCTTTTTCGGTGTAGACCACGGCAGTATGTG +
Preference number: 5 (lower is better)
Translates to: GPPACSHSSRRRSPA*TSYCLFRCRPRQYV
Trigger: CACATACTGCCGTGGTCTACACCGAAAAAGACAATAAGAAGTCCAAGCTGGTGATCTACGGCGGGATGAGTGGCTGCAGGCTGGGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTCGTGTGTGGCCACTTaGACGTCATCCATGACGAGA +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECSCVAT*TSSMTR
Trigger: TCTCGTCATGGATGACGTCAAAGTGGCCACACACGA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGAGTACTCGATAATCTaGCCGGAGGTCACAGAGGGT +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECEYSII*PEVTEG
Trigger: ACCCTCTGTGACCTCCGGCAAGATTATCGAGTACTC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 90 bp CAGGTACACGGAGTACTCGATAATCTTGCCGGAGGTCACAGAGGGTaGCTCCCAGGTGAGGTGAGCACCATCCGGACTTTTGCTGATTTT +
Preference number: 5 (lower is better)
Translates to: QVHGVLDNLAGGHRG*LPGEVSTIRTFADF
Trigger: AAAATCAGCAAAAGTCCGGATGGTGCTCACCTCACCTGGGAGCCACCCTCTGTGACCTCCGGCAAGATTATCGAGTACTCCGTGTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 90 bp TGGAGCAGATTTCATTTCTGGAGAGGACATGGGCCGCTTGTTGGCTaGCTTGGTGCCAGAGCTGTCTTTACTGGTTTCCTGCAGCCACCT +
Preference number: 5 (lower is better)
Translates to: WSRFHFWRGHGPLVG*LGARAVFTGFLQPP
Trigger: AGGTGGCTGCAGGAAACCAGTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAATGAAATCTGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCCCTGAAGTCATCACCTaGGTGGTGATGATGGTGATG +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECPEVIT*VVMMVM
Trigger: CATCACCATCATCACCACCAAGGTGATGACTTCAGG...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGGCCAGTGGCAATTTaGGGGACAGCAGTGATGATT +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECWPVAI*GTAVMI
Trigger: AATCATCACTGCTGTCCCCAAAATTGCCACTGGCCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCTGGTTTGAACTCATGTaGGAAGTGACAGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECWFELM*EVTVVA
Trigger: GGCCACCACTGTCACTTCCAACATGAGTTCAAACCA...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCATGGTCACTGTTATTTaGGCCGGGATGGGGACTTCA +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECMVTVI*AGMGTS
Trigger: TGAAGTCCCCATCCCGGCCAAAATAACAGTGACCAT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS GCA 90 bp ATTTCATTTCTGGAGAGGACATGGGCCGCTTGTTGGCTGGCTTGGTaGCAGAGCTGTCTTTACTGGTTTCCTGCAGCCACCTCACTTGTG +
Preference number: 5 (lower is better)
Translates to: ISFLERTWAACWLAW*QSCLYWFPAATSLV
Trigger: CACAAGTGAGGTGGCTGCAGGAAACCAGTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAATGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 90 bp TCTTTGGAGCAGATTTCATTTCTGGAGAGGACATGGGCCGCTTGTTaGCTGGCTTGGTGCCAGAGCTGTCTTTACTGGTTTCCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SLEQISFLERTWAAC*LAWCQSCLYWFPAA
Trigger: GGCTGCAGGAAACCAGTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAATGAAATCTGCTCCAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCACCACCGACATCACTTaGCCCAGATTGGAAATCAGA +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECTTDIT*PRLEIR
Trigger: TCTGATTTCCAATCTGGGCAAAGTGATGTCGGTGGT...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS-3UTR CAA 90 bp AAAGAGAAAGGGGAGAGGAGTGAACAGCGGCTCGCGAGGGTGAAGTGCGAATGCGCACCATCCGGACTTTaGCTGATTTTAATGGCACAA +
Preference number: 5 (lower is better)
Translates to: KEKGERSEQRLARVKCECAPSGL*LILMAQ
Trigger: TTGTGCCATTAAAATCAGCAAAAGTCCGGATGGTGC...GCATTCGCACTTCACCCTCGCGAGCCGCTGTTCACTCCTCTCCCCTTTCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 72 bp CAAAAGCAGGGCTGCGGCCCCCGGGCTCCCGTGCCATaGTCGGCCCAAGGAGTGGGCCGGCCGAGCACGGGG +
Preference number: 6 (lower is better)
Translates to: QKQGCGPRAPVP*SAQGVGRPSTG
Trigger: CCCCGTGCTCGGCCGGCCCACTCCTTGGGCCGAGCATGGCACGGGAGCCCGGGGGCCGCAGCCCTGCTTTTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp CTTGATGGCCACGGCGCGGTGGCCGTGGCGGGGCCGTaGCACCGGACCCGACCAGCCCACCACTCGCTTCCA +
Preference number: 6 (lower is better)
Translates to: LDGHGAVAVAGP*HRTRPAHHSLP
Trigger: TGGAAGCGAGTGGTGGGCTGGTCGGGTCCGGTGCCACGGCCCCGCCACGGCCACCGCGCCGTGGCCATCAAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp ACGATGAGCTCCTTGATGGCCACGGCGCGGTGGCCGTaGCGGGGCCGTGGCACCGGACCCGACCAGCCCACC +
Preference number: 6 (lower is better)
Translates to: TMSSLMATARWP*RGRGTGPDQPT
Trigger: GGTGGGCTGGTCGGGTCCGGTGCCACGGCCCCGCCACGGCCACCGCGCCGTGGCCATCAAGGAGCTCATCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GGGCGACCAGCAGGGGGCTGCTGCCCACCCTCGGGCTaGCCCGTGCCCCCGTTTGAAGTAGCGGTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: GRPAGGCCPPSG*PVPPFEVAVVA
Trigger: GGCCACCACCGCTACTTCAAACGGGGGCACGGGCCAGCCCGAGGGTGGGCAGCAGCCCCCTGCTGGTCGCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp CGTGGCGGCAGCTGCTGGCGAGGACCTGGCGACACCTaGAGTTCCTCTGGGGGCGGCACAGAGGGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: RGGSCWRGPGDT*SSSGGGTEGPG
Trigger: CCCGGGCCCCTCTGTGCCGCCCCCAGAGGAACTCCAGGTGTCGCCAGGTCCTCGCCAGCAGCTGCCGCCACG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000444191.5
CDS GCA 72 bp CTGCACAAAAGCAGGGCTGCGGCCCCCGGGCTCCCGTaGCATGCTCGGCCCAAGGAGTGGGCCGGCCGAGCA +
Preference number: 6 (lower is better)
Translates to: LHKSRAAAPGLP*HARPKEWAGRA
Trigger: TGCTCGGCCGGCCCACTCCTTGGGCCGAGCATGGCACGGGAGCCCGGGGGCCGCAGCCCTGCTTTTGTGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp GGGGGCGGCACAGAGGGGCCCGGGACCGGTGTGGACTaGGTCACGGTGGTCACAGCCCGCGTCAGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: GGGTEGPGTGVD*VTVVTARVSVE
Trigger: CTCCACACTGACGCGGGCTGTGACCACCGTGACGCAGTCCACACCGGTCCCGGGCCCCTCTGTGCCGCCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000444191.5
CDS CCA 72 bp CCCAAGTCCCCAGCACTGGCCGGCTTCCGGGGCGGGTaGAAAGGAGCCACAAGCGCCGCGGTCGTCGCAGCC +
Preference number: 6 (lower is better)
Translates to: PKSPALAGFRGG*KGATSAAVVAA
Trigger: GGCTGCGACGACCGCGGCGCTTGTGGCTCCTTTCCACCCGCCCCGGAAGCCGGCCAGTGCTGGGGACTTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS CCA 72 bp GCCCAAGGAGTGGGCCGGCCGAGCACGGGGCCCCGGTaGCCATCACAGTCATGGTGGTGCTGGTCGCGCTGG +
Preference number: 6 (lower is better)
Translates to: AQGVGRPSTGPR*PSQSWWCWSRW
Trigger: CCAGCGCGACCAGCACCACCATGACTGTGATGGCCACCGGGGCCCCGTGCTCGGCCGGCCCACTCCTTGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp CCTCTGGGGGCGGCACAGAGGGGCCCGGGACCGGTGTaGACTGCGTCACGGTGGTCACAGCCCGCGTCAGTG +
Preference number: 6 (lower is better)
Translates to: PLGAAQRGPGPV*TASRWSQPASV
Trigger: CACTGACGCGGGCTGTGACCACCGTGACGCAGTCCACACCGGTCCCGGGCCCCTCTGTGCCGCCCCCAGAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000444191.5
CDS CCA 72 bp GGGCTGGGCCCGCAGTACACCCGCATGAAGGCCAGCTaGGCCGGGGTGGAGCTCTTGAGCTCGCCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: GLGPQYTRMKAS*AGVELLSSPPA
Trigger: GGCTGGGGGCGAGCTCAAGAGCTCCACCCCGGCCCAGCTGGCCTTCATGCGGGTGTACTGCGGGCCCAGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 90 bp GCGGGCCGGAGGCCGGTGGAACCAGCTCGAGCTCTCGAGGGCCGTTaGGGGGCTCGCGCCGTACGGCTTGTGAAGTCTCGCGCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: AGRRPVEPARALEGR*GARAVRLVKSRASP
Trigger: GGGAGAGGCGCGAGACTTCACAAGCCGTACGGCGCGAGCCCCCAAACGGCCCTCGAGAGCTCGAGCTGGTTCCACCGGCCTCCGGCCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS GCA 72 bp GCTGGGCGAGCCACCCTGGAGGCTCTCGCACACAGGTaGCATGCGGGGCTCCCCAGCACCCACGCTGGAACG +
Preference number: 6 (lower is better)
Translates to: AGRATLEALAHR*HAGLPSTHAGT
Trigger: CGTTCCAGCGTGGGTGCTGGGGAGCCCCGCATGGCACCTGTGTGCGAGAGCCTCCAGGGTGGCTCGCCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp AACACCACGATGAGCTCCTTGATGGCCACGGCGCGGTaGCCGTGGCGGGGCCGTGGCACCGGACCCGACCAG +
Preference number: 6 (lower is better)
Translates to: NTTMSSLMATAR*PWRGRGTGPDQ
Trigger: CTGGTCGGGTCCGGTGCCACGGCCCCGCCACGGCCACCGCGCCGTGGCCATCAAGGAGCTCATCGTGGTGTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp CGGCCGAGCACGGGGCCCCGGTGGCCATCACAGTCATaGTGGTGCTGGTCGCGCTGGTCTGGCGGGTTTGGC +
Preference number: 6 (lower is better)
Translates to: RPSTGPRWPSQS*WCWSRWSGGFG
Trigger: GCCAAACCCGCCAGACCAGCGCGACCAGCACCACCATGACTGTGATGGCCACCGGGGCCCCGTGCTCGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp CCCTCGTTGCCGCCGCCAAACACCACGATGAGCTCCTaGATGGCCACGGCGCGGTGGCCGTGGCGGGGCCGT +
Preference number: 6 (lower is better)
Translates to: PSLPPPNTTMSS*MATARWPWRGR
Trigger: ACGGCCCCGCCACGGCCACCGCGCCGTGGCCATCAAGGAGCTCATCGTGGTGTTTGGCGGCGGCAACGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp CGGCCGACAGGTGCCCCAGCTCCGCCTGAGTCACGGTaGCTGCTGCCTCGGAGGTGTCCATGGGCTCGCCGG +
Preference number: 6 (lower is better)
Translates to: RPTGAPAPPESR*LLPRRCPWARR
Trigger: CCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTGTCGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 90 bp CGCAGCCCCGCCGGCGCTCAGACCACAATTGTGGGAGCCGCCATCTaGAGACCGTCCCGCTTCCCCGCCCAGCGCCTTAGTGCAGCCGCC +
Preference number: 6 (lower is better)
Translates to: RSPAGAQTTIVGAAI*RPSRFPAQRLSAAA
Trigger: GGCGGCTGCACTAAGGCGCTGGGCGGGGAAGCGGGACGGTCTCAAGATGGCGGCTCCCACAATTGTGGTCTGAGCGCCGGCGGGGCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS CAA 90 bp CCTGACCCTCGGCCGACAGGTGCCCCAGCTCCGCCTGAGTCACGGTaGCTGCTGCCTCGGAGGTGTCCATGGGCTCGCCGGTGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: PDPRPTGAPAPPESR*LLPRRCPWARRCLP
Trigger: TGGCAGGCACCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTGTCGGCCGAGGGTCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369984.4
ENST00000444191.5
CDS TCA 72 bp AGCCCTGGGCTGCCTCCAGCGCCCCAGTGGCCACACTaGTCCGGATCACGGCAGGGGTGCCAGCTGCACAGG +
Preference number: 6 (lower is better)
Translates to: SPGLPPAPQWPH*SGSRQGCQLHR
Trigger: CCTGTGCAGCTGGCACCCCTGCCGTGATCCGGATCAGTGTGGCCACTGGGGCGCTGGAGGCAGCCCAGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp GGACCCGACCAGCCCACCACTCGCTTCCAGCGGGGCTaGAGAAGCACCGCTGGCAAGTTGGCGGGCGACACG +
Preference number: 6 (lower is better)
Translates to: GPDQPTTRFQRG*RSTAGKLAGDT
Trigger: CGTGTCGCCCGCCAACTTGCCAGCGGTGCTTCTGCAGCCCCGCTGGAAGCGAGTGGTGGGCTGGTCGGGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp AGCCGGCAGACTCCTGGCCCGAAGATGGCTCCCCTGTaGTGCTCAGATCCACGGCGGCCGGGAGCTCAGGGG +
Preference number: 6 (lower is better)
Translates to: SRQTPGPKMAPL*CSDPRRPGAQG
Trigger: CCCCTGAGCTCCCGGCCGCCGTGGATCTGAGCAGCACAGGGGAGCCATCTTCGGGCCAGGAGTCTGCCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 72 bp CGACAGGTGCCCCAGCTCCGCCTGAGTCACGGTTGCTaGTGCCTCGGAGGTGTCCATGGGCTCGCCGGTGCC +
Preference number: 6 (lower is better)
Translates to: RQVPQLRLSHGC*CLGGVHGLAGA
Trigger: GGCACCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTGTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 72 bp GGCCGACAGGTGCCCCAGCTCCGCCTGAGTCACGGTTaGTGCTGCCTCGGAGGTGTCCATGGGCTCGCCGGT +
Preference number: 6 (lower is better)
Translates to: GRQVPQLRLSHG*CCLGGVHGLAG
Trigger: ACCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTGTCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 72 bp CAGGTGCCCCAGCTCCGCCTGAGTCACGGTTGCTGCTaGCTCGGAGGTGTCCATGGGCTCGCCGGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: QVPQLRLSHGCC*LGGVHGLAGAC
Trigger: GCAGGCACCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp TGTGTTGGGAAAGGAGCCAGCAGCGCGGTGCCAGCCTaGGGGGTGACGCTGGGTGCCGCCGCCACCTCTAGG +
Preference number: 6 (lower is better)
Translates to: CVGKGASSAVPA*GVTLGAAATSR
Trigger: CCTAGAGGTGGCGGCGGCACCCAGCGTCACCCCCCAGGCTGGCACCGCGCTGCTGGCTCCTTTCCCAACACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp CACCACCGCAGAGCCGGCAGACTCCTGGCCCGAAGATaGCTCCCCTGTGCTGCTCAGATCCACGGCGGCCGG +
Preference number: 6 (lower is better)
Translates to: HHRRAGRLLARR*LPCAAQIHGGR
Trigger: CCGGCCGCCGTGGATCTGAGCAGCACAGGGGAGCCATCTTCGGGCCAGGAGTCTGCCGGCTCTGCGGTGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 90 bp AGGCTCAAGAAGCTGGAGGCCGCTGAGTCCCGTCGCCCCGACTACTaGTCCGGGCGCTCCCGCTTACAAGCTCGGGCGGGAGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: RLKKLEAAESRRPDY*SGRSRLQARAGGPG
Trigger: CCCAGGGCCTCCCGCCCGAGCTTGTAAGCGGGAGCGCCCGGACAAGTAGTCGGGGCGACGGGACTCAGCGGCCTCCAGCTTCTTGAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 90 bp GCTCCCGCTTACAAGCTCGGGCGGGAGGCCCTGGGAGCCGCCATCTaGAGCCGCCTCTCTCTCCTCCCTTCCTCAGTCGTAGCCCTCCCC +
Preference number: 6 (lower is better)
Translates to: APAYKLGREALGAAI*SRLSLLPSSVVALP
Trigger: GGGGAGGGCTACGACTGAGGAAGGGAGGAGAGAGAGGCGGCTCAAGATGGCGGCTCCCAGGGCCTCCCGCCCGAGCTTGTAAGCGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS CAA 90 bp TCCACTATTCCCTCGTTGCCGCCGCCAAACACCACGATGAGCTCCTaGATGGCCACGGCGCGGTGGCCGTGGCGGGGCCGTGGCACCGGA +
Preference number: 6 (lower is better)
Translates to: STIPSLPPPNTTMSS*MATARWPWRGRGTG
Trigger: TCCGGTGCCACGGCCCCGCCACGGCCACCGCGCCGTGGCCATCAAGGAGCTCATCGTGGTGTTTGGCGGCGGCAACGAGGGAATAGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS TCA 72 bp CAGCACCCACGCTGGAACGGGTCATGGCAGCGGTGCTaGCCGCATGGCTGTGGCGCCCCGCAGGAAGGTCCT +
Preference number: 6 (lower is better)
Translates to: QHPRWNGSWQRC*PHGCGAPQEGP
Trigger: AGGACCTTCCTGCGGGGCGCCACAGCCATGCGGTCAGCACCGCTGCCATGACCCGTTCCAGCGTGGGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp GGCCACACTGATCCGGATCACGGCAGGGGTGCCAGCTaGACAGGCCCGACGGGCATCTCGCTGGTGGTTGGC +
Preference number: 6 (lower is better)
Translates to: GHTDPDHGRGAS*TGPTGISLVVG
Trigger: GCCAACCACCAGCGAGATGCCCGTCGGGCCTGTGCAGCTGGCACCCCTGCCGTGATCCGGATCAGTGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp TCCCCCATCAGGGCTGTGGAAGCCGACTGCAGAAGCTaGCGTGGCGGCAGCTGCTGGCGAGGACCTGGCGAC +
Preference number: 6 (lower is better)
Translates to: SPIRAVEADCRS*RGGSCWRGPGD
Trigger: GTCGCCAGGTCCTCGCCAGCAGCTGCCGCCACGGCAGCTTCTGCAGTCGGCTTCCACAGCCCTGATGGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 72 bp CGGCAGACTCCTGGCCCGAAGATGGCTCCCCTGTGCTaGTCAGATCCACGGCGGCCGGGAGCTCAGGGGTCT +
Preference number: 6 (lower is better)
Translates to: RQTPGPKMAPLC*SDPRRPGAQGS
Trigger: AGACCCCTGAGCTCCCGGCCGCCGTGGATCTGAGCAGCACAGGGGAGCCATCTTCGGGCCAGGAGTCTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 72 bp CAGGTGCCCCAGCTCCGCCTGAGTCACGGTTGCTGCTaGCTCGGAGGTGTCCATGGGCTCGCCGGTGCCCAT +
Preference number: 6 (lower is better)
Translates to: QVPQLRLSHGCC*LGGVHGLAGAH
Trigger: ATGGGCACCGGCGAGCCCATGGACACCTCCGAGGCAGCAGCAACCGTGACTCAGGCGGAGCTGGGGCACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS CCA 72 bp GGGGTGCCAGCTGCACAGGCCCGACGGGCATCTCGCTaGTGGTTGGCGCCGACGCTCGACATGGCTGTAGTG +
Preference number: 6 (lower is better)
Translates to: GVPAAQARRASR*WLAPTLDMAVV
Trigger: CACTACAGCCATGTCGAGCGTCGGCGCCAACCACCAGCGAGATGCCCGTCGGGCCTGTGCAGCTGGCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GTGGTGCTGGTCGCGCTGGTCTGGCGGGTTTGGCACTaGGACTTAGAGCCCTGGGCTGCCTCCAGCGCCCCA +
Preference number: 6 (lower is better)
Translates to: VVLVALVWRVWH*DLEPWAASSAP
Trigger: TGGGGCGCTGGAGGCAGCCCAGGGCTCTAAGTCCCAGTGCCAAACCCGCCAGACCAGCGCGACCAGCACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp CCGAGCACGGGGCCCCGGTGGCCATCACAGTCATGGTaGTGCTGGTCGCGCTGGTCTGGCGGGTTTGGCACT +
Preference number: 6 (lower is better)
Translates to: PSTGPRWPSQSW*CWSRWSGGFGT
Trigger: AGTGCCAAACCCGCCAGACCAGCGCGACCAGCACCACCATGACTGTGATGGCCACCGGGGCCCCGTGCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GCCGCCGCCACCTCTAGGCCAGACTCCACGGTCCTGTaGGAAGAAGTGGCGTCGGGAAGCAGGGCACCCACG +
Preference number: 6 (lower is better)
Translates to: AAATSRPDSTVL*EEVASGSRAPT
Trigger: CGTGGGTGCCCTGCTTCCCGACGCCACTTCTTCCCACAGGACCGTGGAGTCTGGCCTAGAGGTGGCGGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp CAGAGGGGCCCGGGACCGGTGTGGACTGCGTCACGGTaGTCACAGCCCGCGTCAGTGTGGAGGACACGGTTG +
Preference number: 6 (lower is better)
Translates to: QRGPGPVWTASR*SQPASVWRTRL
Trigger: CAACCGTGTCCTCCACACTGACGCGGGCTGTGACCACCGTGACGCAGTCCACACCGGTCCCGGGCCCCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 72 bp AAGCTGGAGGCCGCTGAGTCCCGTCGCCCCGACTACTaGTCCGGGCGCTCCCGCTTACAAGCTCGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: KLEAAESRRPDY*SGRSRLQARAG
Trigger: TCCCGCCCGAGCTTGTAAGCGGGAGCGCCCGGACAAGTAGTCGGGGCGACGGGACTCAGCGGCCTCCAGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 90 bp GCAGGGGTGCCAGCTGCACAGGCCCGACGGGCATCTCGCTGGTGGTaGGCGCCGACGCTCGACATGGCTGTAGTGGCAGTGTTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: AGVPAAQARRASRWW*APTLDMAVVAVLVV
Trigger: CACCACCAACACTGCCACTACAGCCATGTCGAGCGTCGGCGCCAACCACCAGCGAGATGCCCGTCGGGCCTGTGCAGCTGGCACCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 90 bp CCGCAGTACACCCGCATGAAGGCCAGCTGGGCCGGGGTGGAGCTCTaGAGCTCGCCCCCAGCCTGTGAGCTCTGGATGGCCAGGTACACG +
Preference number: 6 (lower is better)
Translates to: PQYTRMKASWAGVEL*SSPPACELWMARYT
Trigger: CGTGTACCTGGCCATCCAGAGCTCACAGGCTGGGGGCGAGCTCAAGAGCTCCACCCCGGCCCAGCTGGCCTTCATGCGGGTGTACTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 72 bp TCGAGGGCCGTTTGGGGGCTCGCGCCGTACGGCTTGTaGAGTCTCGCGCCTCTCCCCTTAGTCCGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: SRAVWGLAPYGL*SLAPLPLVRLC
Trigger: GCAGAGGCGGACTAAGGGGAGAGGCGCGAGACTTCACAAGCCGTACGGCGCGAGCCCCCAAACGGCCCTCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS GCA 72 bp ATCTTCGGCACAGAGGGGCCCGGGACCGGTGTGGACTaGGTCACGGTGGTCACAGCCCGCGTCAGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: IFGTEGPGTGVD*VTVVTARVSVE
Trigger: CTCCACACTGACGCGGGCTGTGACCACCGTGACGCAGTCCACACCGGTCCCGGGCCCCTCTGTGCCGAAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS CCA 72 bp GACACACCTAACGAATGGAGGCGGGCCGGAGGCCGGTaGAACCAGCTCGAGCTCTCGAGGGCCGTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: DTPNEWRRAGGR*NQLELSRAVWG
Trigger: CCCCCAAACGGCCCTCGAGAGCTCGAGCTGGTTCCACCGGCCTCCGGCCCGCCTCCATTCGTTAGGTGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS CCA 72 bp CGCCGCTCCCGAAACAGCCTCGACACACCTAACGAATaGAGGCGGGCCGGAGGCCGGTGGAACCAGCTCGAG +
Preference number: 6 (lower is better)
Translates to: RRSRNSLDTPNE*RRAGGRWNQLE
Trigger: CTCGAGCTGGTTCCACCGGCCTCCGGCCCGCCTCCATTCGTTAGGTGTGTCGAGGCTGTTTCGGGAGCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS CCA 72 bp GTGCCAGCTGCACAGGCCCGACGGGCATCTCGCTGGTaGTTGGCGCCGACGCTCGACATGGCTGTAGTGGCA +
Preference number: 6 (lower is better)
Translates to: VPAAQARRASRW*LAPTLDMAVVA
Trigger: TGCCACTACAGCCATGTCGAGCGTCGGCGCCAACCACCAGCGAGATGCCCGTCGGGCCTGTGCAGCTGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp ACGGGGCCCCGGTGGCCATCACAGTCATGGTGGTGCTaGTCGCGCTGGTCTGGCGGGTTTGGCACTGGGACT +
Preference number: 6 (lower is better)
Translates to: TGPRWPSQSWWC*SRWSGGFGTGT
Trigger: AGTCCCAGTGCCAAACCCGCCAGACCAGCGCGACCAGCACCACCATGACTGTGATGGCCACCGGGGCCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp AGGCCGGTGGAACCAGCTCGAGCTCTCGAGGGCCGTTaGGGGGCTCGCGCCGTACGGCTTGTGAAGTCTCGC +
Preference number: 6 (lower is better)
Translates to: RPVEPARALEGR*GARAVRLVKSR
Trigger: GCGAGACTTCACAAGCCGTACGGCGCGAGCCCCCAAACGGCCCTCGAGAGCTCGAGCTGGTTCCACCGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS CAA 72 bp CCAGCTGCACAGGCCCGACGGGCATCTCGCTGGTGGTaGGCGCCGACGCTCGACATGGCTGTAGTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: PAAQARRASRWW*APTLDMAVVAV
Trigger: CACTGCCACTACAGCCATGTCGAGCGTCGGCGCCAACCACCAGCGAGATGCCCGTCGGGCCTGTGCAGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 90 bp GGTGGGGGCGGCAGGTCTGGCTTCACACCCAGGGACTCGATGCCATaGGCCACTTCGGTCAGGGTAGCTGCAGCCTGCAGCTTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: GGGGRSGFTPRDSMP*ATSVRVAAACSLAG
Trigger: CCCAGCCAAGCTGCAGGCTGCAGCTACCCTGACCGAAGTGGCCAATGGCATCGAGTCCCTGGGTGTGAAGCCAGACCTGCCGCCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 72 bp CCGGCGCTCAGACCACAATTGTGGGAGCCGCCATCTTaGGACCGTCCCGCTTCCCCGCCCAGCGCCTTAGTG +
Preference number: 6 (lower is better)
Translates to: PALRPQLWEPPS*DRPASPPSALV
Trigger: CACTAAGGCGCTGGGCGGGGAAGCGGGACGGTCTCAAGATGGCGGCTCCCACAATTGTGGTCTGAGCGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS TCA 72 bp AGCCGTCACGCCCACTCCAAATGTACAGGCGGGTGTTaGTGGCGACTGCGCAGTGGCCAGCCCGAGCACGGG +
Preference number: 6 (lower is better)
Translates to: SRHAHSKCTGGC*WRLRSGQPEHG
Trigger: CCCGTGCTCGGGCTGGCCACTGCGCAGTCGCCATCAACACCCGCCTGTACATTTGGAGTGGGCGTGACGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000461098.1
CDS GCA 72 bp GGGCTGCATGGTGATGGTTGGGGTTGTGAGCCCGCCTaGCGCTGTCAGCGTGGTCTGTGCGGCCGACACAGT +
Preference number: 6 (lower is better)
Translates to: GLHGDGWGCEPA*RCQRGLCGRHS
Trigger: ACTGTGTCGGCCGCACAGACCACGCTGACAGCGGCAGGCGGGCTCACAACCCCAACCATCACCATGCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp CTGGTCTGGCGGGTTTGGCACTGGGACTTAGAGCCCTaGGCTGCCTCCAGCGCCCCAGTGGCCACACTGATC +
Preference number: 6 (lower is better)
Translates to: LVWRVWHWDLEP*AASSAPVATLI
Trigger: GATCAGTGTGGCCACTGGGGCGCTGGAGGCAGCCCAGGGCTCTAAGTCCCAGTGCCAAACCCGCCAGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GTCATGGTGGTGCTGGTCGCGCTGGTCTGGCGGGTTTaGCACTGGGACTTAGAGCCCTGGGCTGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: VMVVLVALVWRV*HWDLEPWAASS
Trigger: GCTGGAGGCAGCCCAGGGCTCTAAGTCCCAGTGCCAAACCCGCCAGACCAGCGCGACCAGCACCACCATGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp ACCACAGTGGCCACCACCGCAGAGCCGGCAGACTCCTaGCCCGAAGATGGCTCCCCTGTGCTGCTCAGATCC +
Preference number: 6 (lower is better)
Translates to: TTVATTAEPADS*PEDGSPVLLRS
Trigger: GGATCTGAGCAGCACAGGGGAGCCATCTTCGGGCCAGGAGTCTGCCGGCTCTGCGGTGGTGGCCACTGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp GGGCAGCCAGCTCCTGCTGTGTCAGCACAATGGGTATaGTGGTGGCCTGGCCCTCCTGACCCTCGGCCGACA +
Preference number: 6 (lower is better)
Translates to: GQPAPAVSAQWV*WWPGPPDPRPT
Trigger: TGTCGGCCGAGGGTCAGGAGGGCCAGGCCACCACCATACCCATTGTGCTGACACAGCAGGAGCTGGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp GCCTGCAGCTTGGCTGGGCTGGCCACCACAACCGGCTaGGGGGCCACAAATGTGTTGGATGGAGCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: ACSLAGLATTTG*GATNVLDGARL
Trigger: GAGCCTGGCTCCATCCAACACATTTGTGGCCCCCCAGCCGGTTGTGGTGGCCAGCCCAGCCAAGCTGCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp GCTTGGTGGTGTAGTCGATGTGGGCGTTGGAAAGGCTaGAGGACTGCACCAGGCAGGAGGGGCTGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: AWWCSRCGRWKG*RTAPGRRGWAR
Trigger: GCGGGCCCAGCCCCTCCTGCCTGGTGCAGTCCTCCAGCCTTTCCAACGCCCACATCGACTACACCACCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp ATGAGATCTTCGGCACAGAGGGGCCCGGGACCGGTGTaGACTGCGTCACGGTGGTCACAGCCCGCGTCAGTG +
Preference number: 6 (lower is better)
Translates to: MRSSAQRGPGPV*TASRWSQPASV
Trigger: CACTGACGCGGGCTGTGACCACCGTGACGCAGTCCACACCGGTCCCGGGCCCCTCTGTGCCGAAGATCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS CAA 72 bp GCCGGCGCTCAGACCACAATTGTGGGAGCCGCCATCTaGAGACCGTCCCGCTTCCCCGCCCAGCGCCTTAGT +
Preference number: 6 (lower is better)
Translates to: AGAQTTIVGAAI*RPSRFPAQRLS
Trigger: ACTAAGGCGCTGGGCGGGGAAGCGGGACGGTCTCAAGATGGCGGCTCCCACAATTGTGGTCTGAGCGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS GCA 72 bp GGGCGACACGGCCGAAGCCATAGTTCCGGGAAAGGGTaGGGTGGGGAGAAGTCAACAAGCGGGAAGGGAGCC +
Preference number: 6 (lower is better)
Translates to: GRHGRSHSSGKG*GGEKSTSGKGA
Trigger: GGCTCCCTTCCCGCTTGTTGACTTCTCCCCACCGCACCCTTTCCCGGAACTATGGCTTCGGCCGTGTCGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp GGTGGCGGAGGAAACCGATGTCCCCACCTGGGCGGCTaGAGTCTTCAGCATGCGAGTGGCAGGGTTGCTCAC +
Preference number: 6 (lower is better)
Translates to: GGGGNRCPHLGG*SLQHASGRVAH
Trigger: GTGAGCAACCCTGCCACTCGCATGCTGAAGACTGCAGCCGCCCAGGTGGGGACATCGGTTTCCTCCGCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp CCCAGGATGGTGGGCTTGGTCCCCGCCCCACTGGCCTaGGTGGTAGTGATGATGGTGGTGGGCTTGCCATCT +
Preference number: 6 (lower is better)
Translates to: PRMVGLVPAPLA*VVVMMVVGLPS
Trigger: AGATGGCAAGCCCACCACCATCATCACTACCACGCAGGCCAGTGGGGCGGGGACCAAGCCCACCATCCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp GGTTGTGAGCCCGCCTGCCGCTGTCAGCGTGGTCTGTaGGGCCGACACAGTGATGGCAGTGGGGTTGATCAC +
Preference number: 6 (lower is better)
Translates to: GCEPACRCQRGL*GRHSDGSGVDH
Trigger: GTGATCAACCCCACTGCCATCACTGTGTCGGCCGCACAGACCACGCTGACAGCGGCAGGCGGGCTCACAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp GCATGGCGGGTTGGAGCACACCCTCTGGGCGCTGCCTaGATTCGAGGTAGTGGCGGTGTTGGTGGTGCCTGT +
Preference number: 6 (lower is better)
Translates to: AWRVGAHPLGAA*IRGSGGVGGAC
Trigger: ACAGGCACCACCAACACCGCCACTACCTCGAATGCAGGCAGCGCCCAGAGGGTGTGCTCCAACCCGCCATGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp ATGCCATTGGCCACTTCGGTCAGGGTAGCTGCAGCCTaGAGCTTGGCTGGGCTGGCCACCACAACCGGCTGG +
Preference number: 6 (lower is better)
Translates to: MPLATSVRVAAA*SLAGLATTTGW
Trigger: CCAGCCGGTTGTGGTGGCCAGCCCAGCCAAGCTGCAGGCTGCAGCTACCCTGACCGAAGTGGCCAATGGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp CCGCCCGAAACTGTCGAGCGCCTAGGCTCAAGAAGCTaGAGGCCGCTGAGTCCCGTCGCCCCGACTACTTGT +
Preference number: 6 (lower is better)
Translates to: PPETVERLGSRS*RPLSPVAPTTC
Trigger: ACAAGTAGTCGGGGCGACGGGACTCAGCGGCCTCCAGCTTCTTGAGCCTAGGCGCTCGACAGTTTCGGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp TGGGGCAGGGCTCTTGGGAGGGTTGGCAGGCACAGATaGGACCGGATTGGGTGTAGGGGAGGTGGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: WGRALGRVGRHR*DRIGCRGGGSS
Trigger: GCTACTGCCACCTCCCCTACACCCAATCCGGTCCCATCTGTGCCTGCCAACCCTCCCAAGAGCCCTGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp TGCGGTGGGCACAGAAATGGAGCTGCCAGGCACCGTTaGCAAGACCTGGATGGTGGTGGTGGTCGGGGGTGC +
Preference number: 6 (lower is better)
Translates to: CGGHRNGAARHR*QDLDGGGGRGC
Trigger: GCACCCCCGACCACCACCACCATCCAGGTCTTGCCAACGGTGCCTGGCAGCTCCATTTCTGTGCCCACCGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GACGTGTTGGTGGCGGAGGAAACCGATGTCCCCACCTaGGCGGCTGCAGTCTTCAGCATGCGAGTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: DVLVAEETDVPT*AAAVFSMRVAG
Trigger: CCCTGCCACTCGCATGCTGAAGACTGCAGCCGCCCAGGTGGGGACATCGGTTTCCTCCGCCACCAACACGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GAACGGGTCATGGCAGCGGTGCTGACCGCATGGCTGTaGCGCCCCGCAGGAAGGTCCTTAATGCTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: ERVMAAVLTAWL*RPAGRSLMLGL
Trigger: CAGCCCAAGCATTAAGGACCTTCCTGCGGGGCGCCACAGCCATGCGGTCAGCACCGCTGCCATGACCCGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp ACGCTGACCGACATGGTGGTGCCAGTGGAAGTGGTCTaGTGTGTCTCACAGGGGCGACCAGCAGGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: TLTDMVVPVEVV*CVSQGRPAGGC
Trigger: GCAGCCCCCTGCTGGTCGCCCCTGTGAGACACACCAGACCACTTCCACTGGCACCACCATGTCGGTCAGCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp CTGCGGTGGGCACAGAAATGGAGCTGCCAGGCACCGTaGGCAAGACCTGGATGGTGGTGGTGGTCGGGGGTG +
Preference number: 6 (lower is better)
Translates to: LRWAQKWSCQAP*ARPGWWWWSGV
Trigger: CACCCCCGACCACCACCACCATCCAGGTCTTGCCAACGGTGCCTGGCAGCTCCATTTCTGTGCCCACCGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 90 bp GGGGCAGGGCTCTTGGGAGGGTTGGCAGGCACAGATGGGACCGGATaGGGTGTAGGGGAGGTGGCAGTAGCAGCCGTGGCAGGAATGTCA +
Preference number: 6 (lower is better)
Translates to: GAGLLGGLAGTDGTG*GVGEVAVAAVAGMS
Trigger: TGACATTCCTGCCACGGCTGCTACTGCCACCTCCCCTACACCCAATCCGGTCCCATCTGTGCCTGCCAACCCTCCCAAGAGCCCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 90 bp AGCGCCACAGTGCTGGGGACCGTGCCGGCCAGCTCATTGAGGCAATaGCTCTCAATGGCTGGGTCGTTGAGACTGTCGGCAGGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SATVLGTVPASSLRQ*LSMAGSLRLSAGAR
Trigger: CCTGGCCCCTGCCGACAGTCTCAACGACCCAGCCATTGAGAGCAATTGCCTCAATGAGCTGGCCGGCACGGTCCCCAGCACTGTGGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 72 bp GGGAAGAAGTGGCGTCGGGAAGCAGGGCACCCACGCTaGCCGACATGGTGGTGCCAGTGGAAGTGGTCTGGT +
Preference number: 6 (lower is better)
Translates to: GKKWRREAGHPR*PTWWCQWKWSG
Trigger: ACCAGACCACTTCCACTGGCACCACCATGTCGGTCAGCGTGGGTGCCCTGCTTCCCGACGCCACTTCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS TCA 72 bp AAATGTGTTGGATGGAGCCAGGCTCTCAGTGGCCGTTaGGGGCAGCAGCGCCACAGTGCTGGGGACCGTGCC +
Preference number: 6 (lower is better)
Translates to: KCVGWSQALSGR*GQQRHSAGDRA
Trigger: GGCACGGTCCCCAGCACTGTGGCGCTGCTGCCCTCAACGGCCACTGAGAGCCTGGCTCCATCCAACACATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 72 bp CCCACTCCAAATGTACAGGCGGGTGTTGATGGCGACTaGGCAGTGGCCAGCCCGAGCACGGGGGATGTTGTC +
Preference number: 6 (lower is better)
Translates to: PTPNVQAGVDGD*AVASPSTGDVV
Trigger: GACAACATCCCCCGTGCTCGGGCTGGCCACTGCGCAGTCGCCATCAACACCCGCCTGTACATTTGGAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000461098.1
CDS GCA 72 bp GAGGTCATGCACAGGCTGGGCCTCCACCCCACTAGGTaGCGTGATCAGAGTTACCTGGGTGGGCTGGGACAC +
Preference number: 6 (lower is better)
Translates to: EVMHRLGLHPTR*RDQSYLGGLGH
Trigger: GTGTCCCAGCCCACCCAGGTAACTCTGATCACGGCACCTAGTGGGGTGGAGGCCCAGCCTGTGCATGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp CACACCAAGGTGACAGTGCCAGGCTGCACATCACCCTaGCCTGAGTCGGCGATGGTAACTGTGGCGGTGGGC +
Preference number: 6 (lower is better)
Translates to: HTKVTVPGCTSP*PESAMVTVAVG
Trigger: GCCCACCGCCACAGTTACCATCGCCGACTCAGGCCAGGGTGATGTGCAGCCTGGCACTGTCACCTTGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GCCATCACAGTCATGGTGGTGCTGGTCGCGCTGGTCTaGCGGGTTTGGCACTGGGACTTAGAGCCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: AITVMVVLVALV*RVWHWDLEPWA
Trigger: AGCCCAGGGCTCTAAGTCCCAGTGCCAAACCCGCCAGACCAGCGCGACCAGCACCACCATGACTGTGATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp ACGCTGGAACGGGTCATGGCAGCGGTGCTGACCGCATaGCTGTGGCGCCCCGCAGGAAGGTCCTTAATGCTT +
Preference number: 6 (lower is better)
Translates to: TLERVMAAVLTA*LWRPAGRSLML
Trigger: AAGCATTAAGGACCTTCCTGCGGGGCGCCACAGCCATGCGGTCAGCACCGCTGCCATGACCCGTTCCAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp TCTCACATGGTGGGTTGGAGCAGACTTGGGTCACGGTaGCCGAGGGGCACAGCAGTGCCTCCAGGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: SHMVGWSRLGSR*PRGTAVPPGLS
Trigger: TGACAGCCCTGGAGGCACTGCTGTGCCCCTCGGCCACCGTGACCCAAGTCTGCTCCAACCCACCATGTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GCCGGCCAGCTCATTGAGGCAATTGCTCTCAATGGCTaGGTCGTTGAGACTGTCGGCAGGGGCCAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: AGQLIEAIALNG*VVETVGRGQGL
Trigger: GAGGCCCTGGCCCCTGCCGACAGTCTCAACGACCCAGCCATTGAGAGCAATTGCCTCAATGAGCTGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 72 bp GTGGTGCCTTTCACAACCAACGTGGTGACGGCTGGCTaGACGGCGGAGACGGTGACGGGTGTGACCAGGCGA +
Preference number: 6 (lower is better)
Translates to: VVPFTTNVVTAG*TAETVTGVTRR
Trigger: TCGCCTGGTCACACCCGTCACCGTCTCCGCCGTCAAGCCAGCCGTCACCACGTTGGTTGTGAAAGGCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp CAAATGTGTTGGATGGAGCCAGGCTCTCAGTGGCCGTaGAGGGCAGCAGCGCCACAGTGCTGGGGACCGTGC +
Preference number: 6 (lower is better)
Translates to: QMCWMEPGSQWP*RAAAPQCWGPC
Trigger: GCACGGTCCCCAGCACTGTGGCGCTGCTGCCCTCAACGGCCACTGAGAGCCTGGCTCCATCCAACACATTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 72 bp GGCAGGTCTGGCTTCACACCCAGGGACTCGATGCCATaGGCCACTTCGGTCAGGGTAGCTGCAGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: GRSGFTPRDSMP*ATSVRVAAACS
Trigger: GCTGCAGGCTGCAGCTACCCTGACCGAAGTGGCCAATGGCATCGAGTCCCTGGGTGTGAAGCCAGACCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 90 bp CTGCCTCCTGGGACAGAGATGGGGCTCTTCACCAGGGTGATGGTCTaGGTGACCCCGCCCACAACTGTGGTCACCACCTGGGCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: LPPGTEMGLFTRVMV*VTPPTTVVTTWACW
Trigger: CCAGCAAGCCCAGGTGGTGACCACAGTTGTGGGCGGGGTCACCAAGACCATCACCCTGGTGAAGAGCCCCATCTCTGTCCCAGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 90 bp GTCCCCGCCCCACTGGCCTGCGTGGTAGTGATGATGGTGGTGGGCTaGCCATCTGCTGAGGTCACCAGCTTCAGGATTGTTCCCGCTGGC +
Preference number: 6 (lower is better)
Translates to: VPAPLACVVVMMVVG*PSAEVTSFRIVPAG
Trigger: GCCAGCGGGAACAATCCTGAAGCTGGTGACCTCAGCAGATGGCAAGCCCACCACCATCATCACTACCACGCAGGCCAGTGGGGCGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 90 bp GAGGGCAGCAGCGCCACAGTGCTGGGGACCGTGCCGGCCAGCTCATaGAGGCAATTGCTCTCAATGGCTGGGTCGTTGAGACTGTCGGCA +
Preference number: 6 (lower is better)
Translates to: EGSSATVLGTVPASS*RQLLSMAGSLRLSA
Trigger: TGCCGACAGTCTCAACGACCCAGCCATTGAGAGCAATTGCCTCAATGAGCTGGCCGGCACGGTCCCCAGCACTGTGGCGCTGCTGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 72 bp CAAGGTGACAGTGCCAGGCTGCACATCACCCTGGCCTaGGTCGGCGATGGTAACTGTGGCGGTGGGCTGTTC +
Preference number: 6 (lower is better)
Translates to: QGDSARLHITLA*VGDGNCGGGLF
Trigger: GAACAGCCCACCGCCACAGTTACCATCGCCGACTCAGGCCAGGGTGATGTGCAGCCTGGCACTGTCACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS TCA 72 bp GGCCCCTGGGAAACCAGGCAGGCACGTCTTAAAGGCTaGGATTTCGCTGAAGGGCCCCCGGCCACAGGCATT +
Preference number: 6 (lower is better)
Translates to: GPWETRQARLKG*DFAEGPPATGI
Trigger: AATGCCTGTGGCCGGGGGCCCTTCAGCGAAATCTCAGCCTTTAAGACGTGCCTGCCTGGTTTCCCAGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS GCA 72 bp CTTGAGTCCTGGCTGCGGTGGGCACAGAAATGGAGCTaGCAGGCACCGTTGGCAAGACCTGGATGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: LESWLRWAQKWS*QAPLARPGWWW
Trigger: CCACCACCATCCAGGTCTTGCCAACGGTGCCTGGCAGCTCCATTTCTGTGCCCACCGCAGCCAGGACTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp CAAATGTACAGGCGGGTGTTGATGGCGACTGCGCAGTaGCCAGCCCGAGCACGGGGGATGTTGTCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: QMYRRVLMATAQ*PARARGMLSSS
Trigger: ACTGGAGGACAACATCCCCCGTGCTCGGGCTGGCCACTGCGCAGTCGCCATCAACACCCGCCTGTACATTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000461098.1
CDS CCA 72 bp GGACACCTTGAGTCCTGGCTGCGGTGGGCACAGAAATaGAGCTGCCAGGCACCGTTGGCAAGACCTGGATGG +
Preference number: 6 (lower is better)
Translates to: GHLESWLRWAQK*SCQAPLARPGW
Trigger: CCATCCAGGTCTTGCCAACGGTGCCTGGCAGCTCCATTTCTGTGCCCACCGCAGCCAGGACTCAAGGTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp ACCTGTGGTGCCTTTCACAACCAACGTGGTGACGGCTaGCTTGACGGCGGAGACGGTGACGGGTGTGACCAG +
Preference number: 6 (lower is better)
Translates to: TCGAFHNQRGDG*LDGGDGDGCDQ
Trigger: CTGGTCACACCCGTCACCGTCTCCGCCGTCAAGCCAGCCGTCACCACGTTGGTTGTGAAAGGCACCACAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GCGGCCGACACAGTGATGGCAGTGGGGTTGATCACCTaGCTTGAGAGGGTGGCAATGGTGCCCAAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: AADTVMAVGLIT*LERVAMVPKVV
Trigger: CACCACCTTGGGCACCATTGCCACCCTCTCAAGCCAGGTGATCAACCCCACTGCCATCACTGTGTCGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GCCTCCACCCCACTAGGTGCCGTGATCAGAGTTACCTaGGTGGGCTGGGACACGGGCTGCATGGTGATGGTT +
Preference number: 6 (lower is better)
Translates to: ASTPLGAVIRVT*VGWDTGCMVMV
Trigger: AACCATCACCATGCAGCCCGTGTCCCAGCCCACCCAGGTAACTCTGATCACGGCACCTAGTGGGGTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GCAGCTGCCTCCTGTCTGTCACAGACGAACTGCACTTaGGTGGGCTGGGGGTGTCCCCCAAGGTTAGCCACA +
Preference number: 6 (lower is better)
Translates to: AAASCLSQTNCT*VGWGCPPRLAT
Trigger: TGTGGCTAACCTTGGGGGACACCCCCAGCCCACCCAAGTGCAGTTCGTCTGTGACAGACAGGAGGCAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp GGGACAGAGATGGGGCTCTTCACCAGGGTGATGGTCTaGGTGACCCCGCCCACAACTGTGGTCACCACCTGG +
Preference number: 6 (lower is better)
Translates to: GTEMGLFTRVMV*VTPPTTVVTTW
Trigger: CCAGGTGGTGACCACAGTTGTGGGCGGGGTCACCAAGACCATCACCCTGGTGAAGAGCCCCATCTCTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp GTGGTCTGTGCGGCCGACACAGTGATGGCAGTGGGGTaGATCACCTGGCTTGAGAGGGTGGCAATGGTGCCC +
Preference number: 6 (lower is better)
Translates to: VVCAADTVMAVG*ITWLERVAMVP
Trigger: GGGCACCATTGCCACCCTCTCAAGCCAGGTGATCAACCCCACTGCCATCACTGTGTCGGCCGCACAGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 90 bp GTGTTGATGGCGACTGCGCAGTGGCCAGCCCGAGCACGGGGGATGTaGTCCTCCAGTGTATCCATCAGGATGGTCTCCCAGGCCATGGTA +
Preference number: 6 (lower is better)
Translates to: VLMATAQWPARARGM*SSSVSIRMVSQAMV
Trigger: TACCATGGCCTGGGAGACCATCCTGATGGATACACTGGAGGACAACATCCCCCGTGCTCGGGCTGGCCACTGCGCAGTCGCCATCAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000461098.1
CDS CAA 90 bp ACAGTGCCTGACTTGTGCACTGTGATGATAGGGCGGGTAGACGTGTaGGTGGCGGAGGAAACCGATGTCCCCACCTGGGCGGCTGCAGTC +
Preference number: 6 (lower is better)
Translates to: TVPDLCTVMIGRVDV*VAEETDVPTWAAAV
Trigger: GACTGCAGCCGCCCAGGTGGGGACATCGGTTTCCTCCGCCACCAACACGTCTACCCGCCCTATCATCACAGTGCACAAGTCAGGCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS TCA 72 bp GACACGGAGGGGGCCCGTTTTTGGGCGTCTTTGCTTTaGGTCTCTTCCACTCCCACCGGCTCGCCTGGAGTT +
Preference number: 6 (lower is better)
Translates to: DTEGARFWASLL*VSSTPTGSPGV
Trigger: AACTCCAGGCGAGCCGGTGGGAGTGGAAGAGACTCAAAGCAAAGACGCCCAAAAACGGGCCCCCTCCGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS TCA 72 bp CATAGCCCTTCTCATTGCGGGCGGCGATGCGGAAGATaGTGGCGGGCTTGGTGGTGTAGTCGATGTGGGCGT +
Preference number: 6 (lower is better)
Translates to: HSPSHCGRRCGR*WRAWWCSRCGR
Trigger: ACGCCCACATCGACTACACCACCAAGCCCGCCATCATCTTCCGCATCGCCGCCCGCAATGAGAAGGGCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp GAGGCCAGAATGGACACAGGGAGGTCATGCACAGGCTaGGCCTCCACCCCACTAGGTGCCGTGATCAGAGTT +
Preference number: 6 (lower is better)
Translates to: EARMDTGRSCTG*ASTPLGAVIRV
Trigger: AACTCTGATCACGGCACCTAGTGGGGTGGAGGCCCAGCCTGTGCATGACCTCCCTGTGTCCATTCTGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp CTGTGCCCGAGTCGAGGACACGGAGGGGGCCCGTTTTaGGGCGTCTTTGCTTTGAGTCTCTTCCACTCCCAC +
Preference number: 6 (lower is better)
Translates to: LCPSRGHGGGPF*GVFALSLFHSH
Trigger: GTGGGAGTGGAAGAGACTCAAAGCAAAGACGCCCAAAAACGGGCCCCCTCCGTGTCCTCGACTCGGGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp GCTCACCTCCAGGGAGTTGGTGTTGGCGCGTACCAGTaGTACTCGGGCTGGGGGTGGTGGCTTTTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: AHLQGVGVGAYQ*YSGWGWWLFCL
Trigger: GAGACAGAAAAGCCACCACCCCCAGCCCGAGTACAACTGGTACGCGCCAACACCAACTCCCTGGAGGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000461098.1
CDS CAA 72 bp GACTTGTGCACTGTGATGATAGGGCGGGTAGACGTGTaGGTGGCGGAGGAAACCGATGTCCCCACCTGGGCG +
Preference number: 6 (lower is better)
Translates to: DLCTVMIGRVDV*VAEETDVPTWA
Trigger: CGCCCAGGTGGGGACATCGGTTTCCTCCGCCACCAACACGTCTACCCGCCCTATCATCACAGTGCACAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp AGCTCATTGAGGCAATTGCTCTCAATGGCTGGGTCGTaGAGACTGTCGGCAGGGGCCAGGGCCTCAGTGGGG +
Preference number: 6 (lower is better)
Translates to: SSLRQLLSMAGS*RLSAGARASVG
Trigger: CCCCACTGAGGCCCTGGCCCCTGCCGACAGTCTCAACGACCCAGCCATTGAGAGCAATTGCCTCAATGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 72 bp GTGCTGGGGACCGTGCCGGCCAGCTCATTGAGGCAATaGCTCTCAATGGCTGGGTCGTTGAGACTGTCGGCA +
Preference number: 6 (lower is better)
Translates to: VLGTVPASSLRQ*LSMAGSLRLSA
Trigger: TGCCGACAGTCTCAACGACCCAGCCATTGAGAGCAATTGCCTCAATGAGCTGGCCGGCACGGTCCCCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 72 bp AGCGCCACAGTGCTGGGGACCGTGCCGGCCAGCTCATaGAGGCAATTGCTCTCAATGGCTGGGTCGTTGAGA +
Preference number: 6 (lower is better)
Translates to: SATVLGTVPASS*RQLLSMAGSLR
Trigger: TCTCAACGACCCAGCCATTGAGAGCAATTGCCTCAATGAGCTGGCCGGCACGGTCCCCAGCACTGTGGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 72 bp CCGAGTGGAGACTGCGAGGAAGAGGCGCCACCCCGCTaGGACTGGGCTTATTCCACGTCAGGGTGTCAATAT +
Preference number: 6 (lower is better)
Translates to: PSGDCEEEAPPR*DWAYSTSGCQY
Trigger: ATATTGACACCCTGACGTGGAATAAGCCCAGTCTCAGCGGGGTGGCGCCTCTTCCTCGCAGTCTCCACTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS TCA 72 bp CACCACCTGGGCTTGCTGGGCCACTGTCACAGTGCCTaGCTTGTGCACTGTGATGATAGGGCGGGTAGACGT +
Preference number: 6 (lower is better)
Translates to: HHLGLLGHCHSA*LVHCDDRAGRR
Trigger: ACGTCTACCCGCCCTATCATCACAGTGCACAAGTCAGGCACTGTGACAGTGGCCCAGCAAGCCCAGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp AGAGGTCCTTGCAGCAGACCTGGTTGTTCCAGGCCTTaGGGTAGCCGTCACGCCCACTCCAAATGTACAGGC +
Preference number: 6 (lower is better)
Translates to: RGPCSRPGCSRP*GSRHAHSKCTG
Trigger: GCCTGTACATTTGGAGTGGGCGTGACGGCTACCGCAAGGCCTGGAACAACCAGGTCTGCTGCAAGGACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000461098.1
CDS GCA 72 bp GGCGGGTTCGAACAGACTCGGACCACGCTACCATTCTaGTGGCCCACAGTCGAGGTCACAAGAGAAGCAGCT +
Preference number: 6 (lower is better)
Translates to: GGFEQTRTTLPF*WPTVEVTREAA
Trigger: AGCTGCTTCTCTTGTGACCTCGACTGTGGGCCAGCAGAATGGTAGCGTGGTCCGAGTCTGTTCGAACCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp CTGGAGAGGACATGGGCCGCTTGTTGGCTGGCTTGGTaGCAGAGCTGTCTTTACTGGTTTCCTGCAGCCACC +
Preference number: 6 (lower is better)
Translates to: LERTWAACWLAW*QSCLYWFPAAT
Trigger: GGTGGCTGCAGGAAACCAGTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp GGGTTCGAACAGACTCGGACCACGCTACCATTCTGCTaGCCCACAGTCGAGGTCACAAGAGAAGCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: GFEQTRTTLPFC*PTVEVTREAAA
Trigger: GGCAGCTGCTTCTCTTGTGACCTCGACTGTGGGCCAGCAGAATGGTAGCGTGGTCCGAGTCTGTTCGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GTGAGCCCCGTTACCATGAGGGTGGTGGTGCCAGCTTaGGCCTCGGCCATTAGCTCTTGGGGAAGTGATAAC +
Preference number: 6 (lower is better)
Translates to: VSPVTMRVVVPA*ASAISSWGSDN
Trigger: GTTATCACTTCCCCAAGAGCTAATGGCCGAGGCCCAAGCTGGCACCACCACCCTCATGGTAACGGGGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 90 bp TTGGTTGCCGTGTTGTACACGTGCAGTTCGTCCACTATTCCCTCGTaGCCGCCGCCAAACACCACGATGAGCTCCTTGATGGCCACGGCG +
Preference number: 6 (lower is better)
Translates to: LVAVLYTCSSSTIPS*PPPNTTMSSLMATA
Trigger: CGCCGTGGCCATCAAGGAGCTCATCGTGGTGTTTGGCGGCGGCAACGAGGGAATAGTGGACGAACTGCACGTGTACAACACGGCAACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 90 bp AGCACCACCTGGGTCACTCCCTGCTGCCCGTGGCCAGTGGCAATTTaGGGGACAGCAGTGATGATTTTCGCAGGTGCTCCAGTTCCTGAA +
Preference number: 6 (lower is better)
Translates to: STTWVTPCCPWPVAI*GTAVMIFAGAPVPE
Trigger: TTCAGGAACTGGAGCACCTGCGAAAATCATCACTGCTGTCCCCAAAATTGCCACTGGCCACGGGCAGCAGGGAGTGACCCAGGTGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS TCA 72 bp GGACCCGTGGACGCCTGGCCTGTGACTGCTGAAGTCTaGACTGGTTTGGTCTGGACCACCGACATCACTTTG +
Preference number: 6 (lower is better)
Translates to: GPVDAWPVTAEV*TGLVWTTDITL
Trigger: CAAAGTGATGTCGGTGGTCCAGACCAAACCAGTTCAGACTTCAGCAGTCACAGGCCAGGCGTCCACGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS TCA 72 bp AGTCACAGGACCCGTGGACGCCTGGCCTGTGACTGCTaGAGTCTGAACTGGTTTGGTCTGGACCACCGACAT +
Preference number: 6 (lower is better)
Translates to: SHRTRGRLACDC*SLNWFGLDHRH
Trigger: ATGTCGGTGGTCCAGACCAAACCAGTTCAGACTTCAGCAGTCACAGGCCAGGCGTCCACGGGTCCTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS TCA 72 bp CGTGGTAGTGATGATGGTGGTGGGCTTGCCATCTGCTaGGGTCACCAGCTTCAGGATTGTTCCCGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: RGSDDGGGLAIC*GHQLQDCSRWQ
Trigger: CTGCCAGCGGGAACAATCCTGAAGCTGGTGACCTCAGCAGATGGCAAGCCCACCACCATCATCACTACCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp CTGCTGGCCCACAGTCGAGGTCACAAGAGAAGCAGCTaGCTCCTGTCTGTCACAGACGAACTGCACTTGGGT +
Preference number: 6 (lower is better)
Translates to: LLAHSRGHKRSS*LLSVTDELHLG
Trigger: ACCCAAGTGCAGTTCGTCTGTGACAGACAGGAGGCAGCTGCTTCTCTTGTGACCTCGACTGTGGGCCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp TCCTGTCTGTCACAGACGAACTGCACTTGGGTGGGCTaGGGGTGTCCCCCAAGGTTAGCCACAACAGTAGTG +
Preference number: 6 (lower is better)
Translates to: SCLSQTNCTWVG*GCPPRLATTVV
Trigger: CACTACTGTTGTGGCTAACCTTGGGGGACACCCCCAGCCCACCCAAGTGCAGTTCGTCTGTGACAGACAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GTGGAGCTCTTGAGCTCGCCCCCAGCCTGTGAGCTCTaGATGGCCAGGTACACGGAGTACTCGATAATCTTG +
Preference number: 6 (lower is better)
Translates to: VELLSSPPACEL*MARYTEYSIIL
Trigger: CAAGATTATCGAGTACTCCGTGTACCTGGCCATCCAGAGCTCACAGGCTGGGGGCGAGCTCAAGAGCTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 72 bp TGGGTCACTCCCTGCTGCCCGTGGCCAGTGGCAATTTaGGGGACAGCAGTGATGATTTTCGCAGGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: WVTPCCPWPVAI*GTAVMIFAGAP
Trigger: TGGAGCACCTGCGAAAATCATCACTGCTGTCCCCAAAATTGCCACTGGCCACGGGCAGCAGGGAGTGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp AGAGCTGTCTTTACTGGTTTCCTGCAGCCACCTCACTaGTGTGGCCGGGCCATAGCCCTTCTCATTGCGGGC +
Preference number: 6 (lower is better)
Translates to: RAVFTGFLQPPH*CGRAIALLIAG
Trigger: GCCCGCAATGAGAAGGGCTATGGCCCGGCCACACAAGTGAGGTGGCTGCAGGAAACCAGTAAAGACAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 90 bp GCCAGCGTGTTGGTACACTTCCACTCCTTCTCGTGTGTGGCCACTTaGACGTCATCCATGACGAGAGGCACCCAGCCACCAAACACGTAC +
Preference number: 6 (lower is better)
Translates to: ASVLVHFHSFSCVAT*TSSMTRGTQPPNTY
Trigger: GTACGTGTTTGGTGGCTGGGTGCCTCTCGTCATGGATGACGTCAAAGTGGCCACACACGAGAAGGAGTGGAAGTGTACCAACACGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp TTTCCCAGCCTGGCTGGCAGGTCGCATGGTGACCAATaGAGTTCCTGTTGTAGCCTGAGGACCGGTCACTTT +
Preference number: 6 (lower is better)
Translates to: FPSLAGRSHGDQ*SSCCSLRTGHF
Trigger: AAAGTGACCGGTCCTCAGGCTACAACAGGAACTCCATTGGTCACCATGCGACCTGCCAGCCAGGCTGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GTGGTGGTGCCAGCTTGGGCCTCGGCCATTAGCTCTTaGGGAAGTGATAACTGGTCTACTTCGGACTGTGTG +
Preference number: 6 (lower is better)
Translates to: VVVPAWASAISS*GSDNWSTSDCV
Trigger: CACACAGTCCGAAGTAGACCAGTTATCACTTCCCCAAGAGCTAATGGCCGAGGCCCAAGCTGGCACCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp GGAGTACTCGATAATCTTGCCGGAGGTCACAGAGGGTaGCTCCCAGGTGAGGTGAGCACCATCCGGACTTTT +
Preference number: 6 (lower is better)
Translates to: GVLDNLAGGHRG*LPGEVSTIRTF
Trigger: AAAAGTCCGGATGGTGCTCACCTCACCTGGGAGCCACCCTCTGTGACCTCCGGCAAGATTATCGAGTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS TCA 72 bp GGTCGCATGGTGACCAATGGAGTTCCTGTTGTAGCCTaGGGACCGGTCACTTTGAGAACAGCAGGGACACCT +
Preference number: 6 (lower is better)
Translates to: GRMVTNGVPVVA*GPVTLRTAGTP
Trigger: AGGTGTCCCTGCTGTTCTCAAAGTGACCGGTCCTCAGGCTACAACAGGAACTCCATTGGTCACCATGCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp AACACGTACATTTTATTTCCGATGGTGGTTGCCGAGTaGAGACTGCGAGGAAGAGGCGCCACCCCGCTGAGA +
Preference number: 6 (lower is better)
Translates to: NTYILFPMVVAE*RLRGRGATPLR
Trigger: TCTCAGCGGGGTGGCGCCTCTTCCTCGCAGTCTCCACTCGGCAACCACCATCGGAAATAAAATGTACGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp CCCAGCCACCAAACACGTACATTTTATTTCCGATGGTaGTTGCCGAGTGGAGACTGCGAGGAAGAGGCGCCA +
Preference number: 6 (lower is better)
Translates to: PSHQTRTFYFRW*LPSGDCEEEAP
Trigger: TGGCGCCTCTTCCTCGCAGTCTCCACTCGGCAACCACCATCGGAAATAAAATGTACGTGTTTGGTGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp GTGTTGTACACGTGCAGTTCGTCCACTATTCCCTCGTaGCCGCCGCCAAACACCACGATGAGCTCCTTGATG +
Preference number: 6 (lower is better)
Translates to: VLYTCSSSTIPS*PPPNTTMSSLM
Trigger: CATCAAGGAGCTCATCGTGGTGTTTGGCGGCGGCAACGAGGGAATAGTGGACGAACTGCACGTGTACAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp TTGGTACACTTCCACTCCTTCTCGTGTGTGGCCACTTaGACGTCATCCATGACGAGAGGCACCCAGCCACCA +
Preference number: 6 (lower is better)
Translates to: LVHFHSFSCVAT*TSSMTRGTQPP
Trigger: TGGTGGCTGGGTGCCTCTCGTCATGGATGACGTCAAAGTGGCCACACACGAGAAGGAGTGGAAGTGTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CAA 72 bp ATTTCTGGAGAGGACATGGGCCGCTTGTTGGCTGGCTaGGTGCCAGAGCTGTCTTTACTGGTTTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: ISGEDMGRLLAG*VPELSLLVSCS
Trigger: GCTGCAGGAAACCAGTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 90 bp ATGGTCTCCCAGGCCATGGTATCCAGGTTGAGACAAGCCAGCGTGTaGGTACACTTCCACTCCTTCTCGTGTGTGGCCACTTTGACGTCA +
Preference number: 6 (lower is better)
Translates to: MVSQAMVSRLRQASV*VHFHSFSCVATLTS
Trigger: TGACGTCAAAGTGGCCACACACGAGAAGGAGTGGAAGTGTACCAACACGCTGGCTTGTCTCAACCTGGATACCATGGCCTGGGAGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp CCCCCTATTCTCTTCCTCCTAGGTCAGTTCTTCCACTaGACACCAAACTCAAGGCGGTGTCCGATCCTCACT +
Preference number: 6 (lower is better)
Translates to: PPILFLLGQFFH*TPNSRRCPILT
Trigger: AGTGAGGATCGGACACCGCCTTGAGTTTGGTGTGCAGTGGAAGAACTGACCTAGGAGGAAGAGAATAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310441.12
CDS GCA 72 bp ACTCCCACCGGCTCGCCTGGAGTTCGTAGAGGTCATTaGTGTATTTCCCATACTCCACCATCCCACCAAACA +
Preference number: 6 (lower is better)
Translates to: TPTGSPGVRRGH*CISHTPPSHQT
Trigger: TGTTTGGTGGGATGGTGGAGTATGGGAAATACAGCAATGACCTCTACGAACTCCAGGCGAGCCGGTGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp GCCTGCAGCCACTCATCCCGCCGTAGATCACCAGCTTaGACTTCTTATTGTCTTTTTCGGTGTAGACCACGG +
Preference number: 6 (lower is better)
Translates to: ACSHSSRRRSPA*TSYCLFRCRPR
Trigger: CCGTGGTCTACACCGAAAAAGACAATAAGAAGTCCAAGCTGGTGATCTACGGCGGGATGAGTGGCTGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS GCA 72 bp TCTGAACTGGTTTGGTCTGGACCACCGACATCACTTTaGCCAGATTGGAAATCAGAGCACTGCCTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: SELVWSGPPTSL*PDWKSEHCLLG
Trigger: TCCCAGGAGGCAGTGCTCTGATTTCCAATCTGGGCAAAGTGATGTCGGTGGTCCAGACCAAACCAGTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4
CDS CCA 72 bp TTTCATTTCTGGAGAGGACATGGGCCGCTTGTTGGCTaGCTTGGTGCCAGAGCTGTCTTTACTGGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: FHFWRGHGPLVG*LGARAVFTGFL
Trigger: CAGGAAACCAGTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAATGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp CACGGGGGATGTTGTCCTCCAGTGTATCCATCAGGATaGTCTCCCAGGCCATGGTATTTATTTCCGATGGTG +
Preference number: 6 (lower is better)
Translates to: HGGCCPPVYPSG*SPRPWYLFPMV
Trigger: CACCATCGGAAATAAATACCATGGCCTGGGAGACCATCCTGATGGATACACTGGAGGACAACATCCCCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461098.1
CDS CAA 72 bp GCAGATTTCATTTCTGGAGAGGACATGGGCCGCTTGTaGGCTGGCTTGGTGCCAGAGCTGTCTTTACTGGTT +
Preference number: 6 (lower is better)
Translates to: ADFISGEDMGRL*AGLVPELSLLV
Trigger: AACCAGTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAATGAAATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 90 bp TTCTTTGGAGCAGATTTCATTTCTGGAGAGGACATGGGCCGCTTGTaGGCTGGCTTGGTGCCAGAGCTGTCTTTACTGGTTTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: FFGADFISGEDMGRL*AGLVPELSLLVSCS
Trigger: GCTGCAGGAAACCAGTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAATGAAATCTGCTCCAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 90 bp AAGGGCATGTCAGAAGTTTCTGTGTTGGCTATGGTCACTGTTATTTaGGCCGGGATGGGGACTTCAGTAGTCAGAGCCCTTGGGGCAGTC +
Preference number: 6 (lower is better)
Translates to: KGMSEVSVLAMVTVI*AGMGTSVVRALGAV
Trigger: GACTGCCCCAAGGGCTCTGACTACTGAAGTCCCCATCCCGGCCAAAATAACAGTGACCATAGCCAACACAGAAACTTCTGACATGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS CAA 90 bp GATTTCTTTGGAGCAGATTTCATTTCTGGAGAGGACATGGGCCGCTaGTTGGCTGGCTTGGTGCCAGAGCTGTCTTTACTGGTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: DFFGADFISGEDMGR*LAGLVPELSLLVSC
Trigger: GCAGGAAACCAGTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAATGAAATCTGCTCCAAAGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp ACATTGGTGCCCTTAATGACTCCCACATCAAACCACTaGTTTTCCTTCTTCATGGGGGCTTTGCTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: TLVPLMTPTSNH*FSFFMGALLGG
Trigger: CCCACCCAGCAAAGCCCCCATGAAGAAGGAAAACCAGTGGTTTGATGTGGGAGTCATTAAGGGCACCAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp CAGATTTCATTTCTGGAGAGGACATGGGCCGCTTGTTaGCTGGCTTGGTGCCAGAGCTGTCTTTACTGGTTT +
Preference number: 6 (lower is better)
Translates to: QISFLERTWAAC*LAWCQSCLYWF
Trigger: AAACCAGTAAAGACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAATGAAATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CCA 72 bp ATTTCTTTGGAGCAGATTTCATTTCTGGAGAGGACATaGGCCGCTTGTTGGCTGGCTTGGTGCCAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: ISLEQISFLERT*AACWLAWCQSC
Trigger: ACAGCTCTGGCACCAAGCCAGCCAACAAGCGGCCCATGTCCTCTCCAGAAATGAAATCTGCTCCAAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310441.12
ENST00000369984.4
ENST00000444191.5
CDS CAA 72 bp TCAACAGCAGAGAAGGGCATGTCAGAAGTTTCTGTGTaGGCTATGGTCACTGTTATTTTGGCCGGGATGGGG +
Preference number: 6 (lower is better)
Translates to: STAEKGMSEVSV*AMVTVILAGMG
Trigger: CCCCATCCCGGCCAAAATAACAGTGACCATAGCCAACACAGAAACTTCTGACATGCCCTTCTCTGCTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS CAA 90 bp TGCAGGATGTCAACAGCAGAGAAGGGCATGTCAGAAGTTTCTGTGTaGGCTATGGTCACTGTTATTTTGGCCGGGATGGGGACTTCAGTA +
Preference number: 6 (lower is better)
Translates to: CRMSTAEKGMSEVSV*AMVTVILAGMGTSV
Trigger: TACTGAAGTCCCCATCCCGGCCAAAATAACAGTGACCATAGCCAACACAGAAACTTCTGACATGCCCTTCTCTGCTGTTGACATCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS CAA 72 bp TCAGAAGTTTCTGTGTTGGCTATGGTCACTGTTATTTaGGCCGGGATGGGGACTTCAGTAGTCAGAGCCCTT +
Preference number: 6 (lower is better)
Translates to: SEVSVLAMVTVI*AGMGTSVVRAL
Trigger: AAGGGCTCTGACTACTGAAGTCCCCATCCCGGCCAAAATAACAGTGACCATAGCCAACACAGAAACTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369984.4
CDS CAA 72 bp TATATAAGTCATTCAGGTACCTTGGAATGTTGTTCTTaGGGTCCTCGCTATCATTGGCCAGACCCCCAAACA +
Preference number: 6 (lower is better)
Translates to: YISHSGTLECCS*GPRYHWPDPQT
Trigger: TGTTTGGGGGTCTGGCCAATGATAGCGAGGACCCAAAGAACAACATTCCAAGGTACCTGAATGACTTATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310441.12
ENST00000369984.4