RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000105856

Ensembl transcript IDs: ENST00000222574.9, ENST00000461963.1, ENST00000463202.5, ENST00000463790.1, ENST00000464009.1, ENST00000468116.1, ENST00000468401.1, ENST00000468410.5, ENST00000478930.5, ENST00000479011.1, ENST00000483809.1, ENST00000485846.5, ENST00000497535.5, ENST00000498408.1, ENST00000607681.1, ENST00000638303.2, ENST00000638380.1, ENST00000638549.1, ENST00000638677.1, ENST00000638758.1, ENST00000638775.1, ENST00000638870.1, ENST00000638893.1, ENST00000640054.1, ENST00000640057.1, ENST00000640195.1, ENST00000640309.1, ENST00000640325.1, ENST00000640401.1, ENST00000640580.1

Found 584 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGGCTGCTGCCACCTGGTGCATCAACTCAGCATGCCATGGTAACTaGAGCAGGTGGCTCTTAGGCTGGGACACCAACACCAGCCACCTG +
Preference number: 1 (lower is better)
Translates to: MAAATWCINSACHGN*SRWLLGWDTNTSHL
Trigger: CAGGTGGCTGGTGTTGGTGTCCCAGCCTAAGAGCCACCTGCTGCAGTTACCATGGCATGCTGAGTTGATGCACCAGGTGGCAGCAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR TCA 90 bp CTTGGCACTGACCAGACTAGGAGCGCCTATGTTTGGCACAGATGCTaGGCCATGTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTC +
Preference number: 1 (lower is better)
Translates to: LGTDQTRSAYVWHRC*AMWWLLEERPTPSF
Trigger: GAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCACATGGCTCAGCATCTGTGCCAAACATAGGCGCTCCTAGTCTGGTCAGTGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR CCA 90 bp CTGGGAGATACAGGCTACAGTGAGTTGCGCCGCTGTACTGCAGCCTaGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTACTAAGG +
Preference number: 1 (lower is better)
Translates to: LGDTGYSELRRCTAA*AMAQIIKGRSLLLR
Trigger: CCTTAGTAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAACTCACTGTAGCCTGTATCTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR CCA 90 bp TACAGTGACTATATCCCAATGCTATTAACTAACTTTACCTTGGCCTaGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGCTGCCAC +
Preference number: 1 (lower is better)
Translates to: YSDYIPMLLTNFTLA*ARSPLEIITDGCCH
Trigger: GTGGCAGCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAGGTAAAGTTAGTTAATAGCATTGGGATATAGTCACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR TCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTCTGAGGTGGGAGGATTaGGCCTGGGAGATACAGGCT +
Preference number: 2 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRLRWED*AWEIQA
Trigger: AGCCTGTATCTCCCAGGCTCAATCCTCCCACCTCAG...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR TCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTGGCAGGCAGATGGCTTaGACCCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRGRQMA*TQEFET
Trigger: GGTCTCAAACTCCTGGGTTCAAGCCATCTGCCTGCC...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR TCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCGGCAGGATAATCACTTaGACCTGGAAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSGRIIT*TWKAEV
Trigger: AACCTCCGCCTTCCAGGTTCAAGTGATTATCCTGCC...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR CCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCACTTTAAAGTCAACCTaGCCGGGCACAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSTLKST*PGTVAH
Trigger: GTGAGCCACTGTGCCCGGCCAGGTTGACTTTAAAGT...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR GCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACGCATGCCATGGTAACTaGAGCAGGTGGCTCTTAGGC +
Preference number: 2 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHACHGN*SRWLLG
Trigger: GCCTAAGAGCCACCTGCTGCAGTTACCATGGCATGC...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTGCTGCTGCCACCTGGTaGATCAACTCAGCATGCCAT +
Preference number: 2 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIAAATW*INSACH
Trigger: ATGGCATGCTGAGTTGATGCACCAGGTGGCAGCAGC...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR CCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAACTTTAAAGTCAACCTaGCCGGGCACAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: LRTALKFTVLTTLAACYKTLKST*PGTVAH
Trigger: GTGAGCCACTGTGCCCGGCCAGGTTGACTTTAAAGT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR TCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGTATGGTCACACGAATTaGGGACAAATGGTGAGACCT +
Preference number: 2 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMYGHTN*GQMVRP
Trigger: AGGTCTCACCATTTGTCCTCAATTCGTGTGACCATA...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR TCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTGTTTGGCACAGATGCTaGGCCATGTGGTGGTTACTA +
Preference number: 2 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIVWHRC*AMWWLL
Trigger: TAGTAACCACCACATGGCTCAGCATCTGTGCCAAAC...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR GCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACATAATAACGGATGGCTaGTGCCACCTGGTGCATCAA +
Preference number: 2 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHIITDG*CHLVHQ
Trigger: TTGATGCACCAGGTGGCAGCAGCCATCCGTTATTAT...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR GCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTTTAAAAGGTAGATCTTaGACTTTGGGAGGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRLKGRS*TLGGRQ
Trigger: CTGCCTGCCTCCCAAAGTGCAAGATCTACCTTTTAA...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR CCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAATGGCTGCTGCCACCTaGTGCATCAACTCAGCATGC +
Preference number: 2 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIMAAAT*CINSAC
Trigger: GCATGCTGAGTTGATGCACCAGGTGGCAGCAGCCAT...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR CCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTAAAAATTAGCCAGGTATaGTGGTGGGCGCCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLKISQV*WWAPVV
Trigger: GACTACAGGCGCCCACCACCATACCTGGCTAATTTT...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTCCGACTCCCAGCTTCTaGTTCATTTCATCATGTGTA +
Preference number: 2 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIPTPSF*FISSCV
Trigger: TACACATGATGAAATGAAGCAGAAGCTGGGAGTCGG...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR CAA 90 bp TTTTATTTCCAGCTTCTACTGAGGACAGCTCTTAAGTTCACCGTTTaGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTACA +
Preference number: 2 (lower is better)
Translates to: FYFQLLLRTALKFTV*TTLAACYKLPVPRT
Trigger: TGTACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAGTAGAAGCTGGAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR TCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATGGCAGGCAGATGGCTTaGACCCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNGRQMA*TQEFET
Trigger: GGTCTCAAACTCCTGGGTTCAAGCCATCTGCCTGCC...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR CAA 90 bp CACCATTACAGTGACTATATCCCAATGCTATTAACTAACTTTACCTaGGCCTGGGCTAGGTCTCCATTGGAAATAATAACGGATGGCTGC +
Preference number: 2 (lower is better)
Translates to: HHYSDYIPMLLTNFT*AWARSPLEIITDGC
Trigger: GCAGCCATCCGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAGGTAAAGTTAGTTAATAGCATTGGGATATAGTCACTGTAATGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR TCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACATTGAGGACAAATGGTaGGACCTTGATCTTCTTAAG +
Preference number: 2 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHIEDKW*DLDLLK
Trigger: CTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAAT...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR TCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACTTTAAGATACATGGCTaGGGAGATACAGAACACGAA +
Preference number: 2 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHFKIHG*GDTEHE
Trigger: TTCGTGTTCTGTATCTCCTCAGCCATGTATCTTAAA...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR TCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTTTTAAGATACATGGCTaGGGAGATACAGAACACGAA +
Preference number: 2 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIFKIHG*GDTEHE
Trigger: TTCGTGTTCTGTATCTCCTCAGCCATGTATCTTAAA...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR TCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATAGCCATTCAGGAAGCTaGGGTGGGAGGATTGAGCCT +
Preference number: 2 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNSHSGS*GGRIEP
Trigger: AGGCTCAATCCTCCCACCTCAGCTTCCTGAATGGCT...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR CCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAATGGCTGCTGCCACCTaGTGCATCAACTCAGCATGC +
Preference number: 2 (lower is better)
Translates to: IVAQSKSSCIANVFALILMAAAT*CINSAC
Trigger: GCATGCTGAGTTGATGCACCAGGTGGCAGCAGCCAT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR CCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAAACTTTACCTTGGCCTaGGCTAGGTCTCCATTGGAA +
Preference number: 2 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKINFTLA*ARSPLE
Trigger: TTCCAATGGAGACCTAGCCCAGGCCAAGGTAAAGTT...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR TCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACATAGCACCATTACAGTaGCTATATCCCAATGCTATT +
Preference number: 2 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHIAPLQ*LYPNAI
Trigger: AATAGCATTGGGATATAGTCACTGTAATGGTGCTAT...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR TCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTACTATTCCAGTTACCATaGACCGTATTGAAGTGTTAC +
Preference number: 2 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLLFQLP*TVLKCY
Trigger: GTAACACTTCAATACGGTTCATGGTAACTGGAATAG...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR TCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATGGCAGGATAATCACTTaGACCTGGAAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNGRIIT*TWKAEV
Trigger: AACCTCCGCCTTCCAGGTTCAAGTGATTATCCTGCC...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR GCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATACCGACTCCCAGCTTCTaGTTCATTTCATCATGTGTA +
Preference number: 2 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIPTPSF*FISSCV
Trigger: TACACATGATGAAATGAAGCAGAAGCTGGGAGTCGG...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR GCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAATAACGGATGGCTGCTaGCACCTGGTGCATCAACTC +
Preference number: 2 (lower is better)
Translates to: IVAQSKSSCIANVFALILITDGC*HLVHQL
Trigger: GAGTTGATGCACCAGGTGGCAGCAGCCATCCGTTAT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR GCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTATTGCACTGCAGTAAGTaGAAAGTCTGCCCCCACCAT +
Preference number: 2 (lower is better)
Translates to: IVAQSKSSCIANVFALILLHCSK*KVCPHH
Trigger: ATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAA...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR CCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAGGAAATAATAACGGATaGCTGCTGCCACCTGGTGCA +
Preference number: 2 (lower is better)
Translates to: IVAQSKSSCIANVFALILGNNNG*LLPPGA
Trigger: TGCACCAGGTGGCAGCAGCCATCCGTTATTATTTCC...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR CCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATGTAGATCTTGCACTTTaGGAGGCAGGCAGATGGCTT +
Preference number: 2 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNVDLAL*EAGRWL
Trigger: AAGCCATCTGCCTGCCTCCCAAAGTGCAAGATCTAC...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR TCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATATTTAAGATACATGGCTaGGGAGATACAGAACACGAA +
Preference number: 2 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIFKIHG*GDTEHE
Trigger: TTCGTGTTCTGTATCTCCTCAGCCATGTATCTTAAA...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR CCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATCGCTGTACTGCAGCCTaGGCTATGGCACAAATAATA +
Preference number: 2 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNRCTAA*AMAQII
Trigger: TATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR GCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTACCGACTCCCAGCTTCTaGTTCATTTCATCATGTGTA +
Preference number: 2 (lower is better)
Translates to: IVAQSKSSCIANVFALILPTPSF*FISSCV
Trigger: TACACATGATGAAATGAAGCAGAAGCTGGGAGTCGG...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR CAA 90 bp ATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTaGATCTTCTTAAGTCTTTCCATCAAGAGTCAATGTATATGCAAA +
Preference number: 2 (lower is better)
Translates to: ISILWSHELRTNGET*IFLSLSIKSQCICK
Trigger: TTTGCATATACATTGACTCTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
3UTR-3UTR TCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAATTGAGGACAAATGGTaGGACCTTGATCTTCTTAAG +
Preference number: 2 (lower is better)
Translates to: IVAQSKSSCIANVFALILIEDKW*DLDLLK
Trigger: CTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAAT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR TCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATCTATTCCAGTTACCATaGACCGTATTGAAGTGTTAC +
Preference number: 2 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNLFQLP*TVLKCY
Trigger: GTAACACTTCAATACGGTTCATGGTAACTGGAATAG...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR GCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAAGTAAGTGCAAAGTCTaGCCCCACCATAAAGATTAT +
Preference number: 2 (lower is better)
Translates to: IVAQSKSSCIANVFALILSKCKV*PHHKDY
Trigger: ATAATCTTTATGGTGGGGGCAGACTTTGCACTTACT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR CAA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAACAGGCTACAGTGAGTaGCGCCGCTGTACTGCAGCC +
Preference number: 3 (lower is better)
Translates to: LRTALKFTVLTTLAACYKTGYSE*RRCTAA
Trigger: GGCTGCAGTACAGCGGCGCAACTCACTGTAGCCTGT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR CAA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTAGGCAGGATAATCACTaGAACCTGGAAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRRQDNH*NLEGGG
Trigger: ACCTCCGCCTTCCAGGTTCAAGTGATTATCCTGCCT...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR CAA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTTGTTCTGGTAGCCTCTaGGCACTGACCAGACTAGGA +
Preference number: 3 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKICSGSL*ALTRLG
Trigger: TCCTAGTCTGGTCAGTGCCAAGAGGCTACCAGAACA...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR CCA 72 bp ACAGGCTACAGTGAGTTGCGCCGCTGTACTGCAGCCTaGGCTATGGCACAAATAATAAAAGGTAGATCCTTA +
Preference number: 3 (lower is better)
Translates to: TGYSELRRCTAA*AMAQIIKGRSL
Trigger: TAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAACTCACTGTAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR-3UTR CAA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTAAGGCAGGATAATCACTaGAACCTGGAAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLRQDNH*NLEGGG
Trigger: ACCTCCGCCTTCCAGGTTCAAGTGATTATCCTGCCT...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR GCA 72 bp GCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTaGTACAAATTGCCAGTTCCCCGTACAATCCATAGT +
Preference number: 3 (lower is better)
Translates to: ALKFTVLTTLAA*YKLPVPRTIHS
Trigger: ACTATGGATTGTACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
3UTR GCA 72 bp GACAGTTGGAGGAAAATTAAAGTGCAAGTGTTGCACTaGAGTAAGTGCAAAGTCTGCCCCCACCATAAAGAT +
Preference number: 3 (lower is better)
Translates to: DSWRKIKVQVLH*SKCKVCPHHKD
Trigger: ATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCTCCAACTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR CAA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACACAAATGGTGAGACCTaGATCTTCTTAAGTCTTTCC +
Preference number: 3 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHTNGET*IFLSLS
Trigger: GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGT...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR CAA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTATGTTCTGGTAGCCTCTaGGCACTGACCAGACTAGGA +
Preference number: 3 (lower is better)
Translates to: IVAQSKSSCIANVFALILCSGSL*ALTRLG
Trigger: TCCTAGTCTGGTCAGTGCCAAGAGGCTACCAGAACA...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR GCA 72 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTaGAAAGTCTGCCCCCACCATAAAGATTATGATGAC +
Preference number: 3 (lower is better)
Translates to: RKIKVQVLHCSK*KVCPHHKDYDD
Trigger: GTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR CAA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAACAAATGGTGAGACCTaGATCTTCTTAAGTCTTTCC +
Preference number: 3 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKITNGET*IFLSLS
Trigger: GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGT...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR CAA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTATTAACTAACTTTACCTaGGCCTGGGCTAGGTCTCCA +
Preference number: 3 (lower is better)
Translates to: IVAQSKSSCIANVFALILLTNFT*AWARSP
Trigger: TGGAGACCTAGCCCAGGCCAAGGTAAAGTTAGTTAA...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
3UTR-3UTR CAA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTATTATGGTCACACGAATaGAGGACAAATGGTGAGACC +
Preference number: 3 (lower is better)
Translates to: IVAQSKSSCIANVFALILLWSHE*RTNGET
Trigger: GGTCTCACCATTTGTCCTCAATTCGTGTGACCATAA...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCTGACTGCCGCGAAGTaGCGGCAGCCCAGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHLTAAK*RQPRRG
Trigger: CCCGCGCCTGGGCTGCCGGCACTTCGCGGCAGTCAG...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222574.9
ENST00000638303.2
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTCCCCGCGCGGGTTACTaGTCCCGCGGCAGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIPRAGY*SRGSSY
Trigger: GTAAGAGCTGCCGCGGGAGCAGTAACCCGCGCGGGG...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222574.9
ENST00000638303.2
CDS-3UTR GCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCCCCGCGCGGGTTACTaGTCCCGCGGCAGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHPRAGY*SRGSSY
Trigger: GTAAGAGCTGCCGCGGGAGCAGTAACCCGCGCGGGG...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000222574.9
ENST00000638303.2
CDS-3UTR TCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCCTGAGGTGGGAGGATTaGGCCTGGGAGATACAGGCT +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSLRWED*AWEIQA
Trigger: AGCCTGTATCTCCCAGGCTCAATCCTCCCACCTCAG...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCGGCAGGCAGATGGCTTaGACCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSGRQMA*TQEFET
Trigger: GGTCTCAAACTCCTGGGTTCAAGCCATCTGCCTGCC...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGGGCACTCACAGTCCCTaGGCTGTGGTTTTTGACAGC +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMGTHSP*AVVFDS
Trigger: GCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCC...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCGGCACTCACAGTCCCTaGGCTGTGGTTTTTGACAGC +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSGTHSP*AVVFDS
Trigger: GCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCC...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCAGCCATTCAGGAAGCTaGGGTGGGAGGATTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSSHSGS*GGRIEP
Trigger: AGGCTCAATCCTCCCACCTCAGCTTCCTGAATGGCT...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGGCTGCTGCCACCTGGTaGATCAACTCAGCATGCCAT +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMAAATW*INSACH
Trigger: ATGGCATGCTGAGTTGATGCACCAGGTGGCAGCAGC...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGCGAAGAAGAGGACACTaGTGGAGGGCGTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMRRRGH*WRACIG
Trigger: TCCTATGCACGCCCTCCACCAGTGTCCTCTTCTTCG...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCCGAAGAAGAGGACACTaGTGGAGGGCGTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSRRRGH*WRACIG
Trigger: TCCTATGCACGCCCTCCACCAGTGTCCTCTTCTTCG...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGCACACCATGTTATGGTaGTCTGACAAACCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMHTMLW*SDKPVA
Trigger: GGCGACGGGTTTGTCAGAGCACCATAACATGGTGTG...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468410.5
ENST00000640195.1
CDS-3UTR TCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCGATCTTGCAAAGTCTTaGCCACCAGGTCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSDLAKS*PPGPPQ
Trigger: TTGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATC...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTGGCAGGATAATCACTTaGACCTGGAAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRGRIIT*TWKAEV
Trigger: AACCTCCGCCTTCCAGGTTCAAGTGATTATCCTGCC...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAAGCCATTCAGGAAGCTaGGGTGGGAGGATTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKSHSGS*GGRIEP
Trigger: AGGCTCAATCCTCCCACCTCAGCTTCCTGAATGGCT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTTCCACAAGACAAAGATaGACGACGCTGGCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRSTRQR*TTLASH
Trigger: ATGGCTCGCCAGCGTCGTGCATCTTTGTCTTGTGGA...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTGCATGCCATGGTAACTaGAGCAGGTGGCTCTTAGGC +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIACHGN*SRWLLG
Trigger: GCCTAAGAGCCACCTGCTGCAGTTACCATGGCATGC...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGTTGCACTGCAGTAAGTaGAAAGTCTGCCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMLHCSK*KVCPHH
Trigger: ATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAA...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCGGTCACACAGAGCGGTaGCTCCCGGTTCACGCCAAG +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIGHTER*LPVHAK
Trigger: CTTGGCGTGAACCGGGAGGCACCGCTCTGTGTGACC...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAACGAAGAAGAGGACACTaGTGGAGGGCGTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKRRRGH*WRACIG
Trigger: TCCTATGCACGCCCTCCACCAGTGTCCTCTTCTTCG...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCGCCAAGCCTCCTCTTTaGGTCACACAGAGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSAKPPL*VTQSGA
Trigger: GGCACCGCTCTGTGTGACCCAAAGAGGAGGCTTGGC...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTACTTTAAAGTCAACCTaGCCGGGCACAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRTLKST*PGTVAH
Trigger: GTGAGCCACTGTGCCCGGCCAGGTTGACTTTAAAGT...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAACAGTGCCAGACAGTTaGAGGCCAGGAATTGCACCA +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKTVPDS*RPGIAP
Trigger: TGGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAGGCAGGATAATCACTTaGACCTGGAAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKGRIIT*TWKAEV
Trigger: AACCTCCGCCTTCCAGGTTCAAGTGATTATCCTGCC...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTCACACCATGTTATGGTaGTCTGACTGCCGCGAAGTG +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIHTMLW*SDCREV
Trigger: CACTTCGCGGCAGTCAGAGCACCATAACATGGTGTG...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222574.9
ENST00000638303.2
CDS-3UTR GCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATCCACAAGACAAAGATaGACGACGCTGGCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKSTRQR*TTLASH
Trigger: ATGGCTCGCCAGCGTCGTGCATCTTTGTCTTGTGGA...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATAACGGATGGCTGCTaGCACCTGGTGCATCAACTC +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIITDGC*HLVHQL
Trigger: GAGTTGATGCACCAGGTGGCAGCAGCCATCCGTTAT...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTGGTCACACAGAGCGGTaGCTCCCGGTTCACGCCAAG +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSGHTER*LPVHAK
Trigger: CTTGGCGTGAACCGGGAGGCACCGCTCTGTGTGACC...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR GCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCACAACTCTGGCAGCTTaGTACAAATTGCCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSTTLAA*YKLPVP
Trigger: GGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGT...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGCATCAGTGGACTTTGTaGACTGGTCGCGATATTTGC +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMHQWTL*TGRDIC
Trigger: GCAAATATCGCGACCAGTCCACAAAGTCCACTGATG...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCCATCAGTGGACTTTGTaGACTGGTCGCGATATTTGC +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSHQWTL*TGRDIC
Trigger: GCAAATATCGCGACCAGTCCACAAAGTCCACTGATG...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCGTGATGAGGGAAGGCTaGTTCACTCTTCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSVMREG*FTLRRR
Trigger: TCTTCTTCGAAGAGTGAACCAGCCTTCCCTCATCAC...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGAACTTTACCTTGGCCTaGGCTAGGTCTCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMNFTLA*ARSPLE
Trigger: TTCCAATGGAGACCTAGCCCAGGCCAAGGTAAAGTT...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGGCCAAGCCTCCTCTTTaGGTCACACAGAGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKAKPPL*VTQSGA
Trigger: GGCACCGCTCTGTGTGACCCAAAGAGGAGGCTTGGC...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR TCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGACTGCATTAGGCATCTaGTTTGTCTTCACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMTALGI*FVFTSH
Trigger: GTGGGAAGTGAAGACAAATCAGATGCCTAATGCAGT...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAGATCTTGCAAAGTCTTaGCCACCAGGTCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKDLAKS*PPGPPQ
Trigger: TTGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATC...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACGATCTTGCAAAGTCTTaGCCACCAGGTCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHDLAKS*PPGPPQ
Trigger: TTGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATC...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACGTTTGGCACAGATGCTaGGCCATGTGGTGGTTACTA +
Preference number: 4 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHVWHRC*AMWWLL
Trigger: TAGTAACCACCACATGGCTCAGCATCTGTGCCAAAC...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCGGTGGCAGCATAGGTTaGAAGGCGGAGACTGGAATC +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSGGSIG*KAETGI
Trigger: GATTCCAGTCTCCGCCTTTCAACCTATGCTGCCACC...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR TCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGGTGCACAGCGGAGAGTaGAACACCCTAGACAGCACG +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKVHSGE*NTLDST
Trigger: CGTGCTGTCTAGGGTGTTTCACTCTCCGCTGTGCAC...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCGTGCACAGCGGAGAGTaGAACACCCTAGACAGCACG +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIVHSGE*NTLDST
Trigger: CGTGCTGTCTAGGGTGTTTCACTCTCCGCTGTGCAC...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR GCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTAAAAGGTAGATCTTaGACTTTGGGAGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSLKGRS*TLGGRQ
Trigger: CTGCCTGCCTCCCAAAGTGCAAGATCTACCTTTTAA...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCCGAAGAAGAGGACACTaGTGGAGGGCGTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSRRRGH*WRACIG
Trigger: TCCTATGCACGCCCTCCACCAGTGTCCTCTTCTTCG...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTGTGATGAGGGAAGGCTaGTTCACTCTTCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRVMREG*FTLRRR
Trigger: TCTTCTTCGAAGAGTGAACCAGCCTTCCCTCATCAC...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCCCTTTCGTGTCTTACTaGTGTTTCCTCCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSPFVSY*CFLLPM
Trigger: CATTGGAAGGAGGAAACACCAGTAAGACACGAAAGG...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTAAAGATGCACGACGCTaGCGAGCCATACTACTTAAC +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRKDARR*RAILLN
Trigger: GTTAAGTAGTATGGCTCGCCAGCGTCGTGCATCTTT...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGACAGTCCCTGAGCTGTaGTTTTTGACAGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMTVPEL*FLTALA
Trigger: TGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGT...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTGGAAATAATAACGGATaGCTGCTGCCACCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIGNNNG*LLPPGA
Trigger: TGCACCAGGTGGCAGCAGCCATCCGTTATTATTTCC...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTTGAAAGGCGGAGACTaGAATCGCCTGCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSLKGGD*NRLPSL
Trigger: GAGGCTTGGCAGGCGATTCCAGTCTCCGCCTTTCAA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTCAATCGGCCTGCGGTaGCAGCATAGGTTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSSIGLR*QHRLKG
Trigger: GCCTTTCAACCTATGCTGCCACCGCAGGCCGATTGA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAAAAATTAGCCAGGTATaGTGGTGGGCGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKKISQV*WWAPVV
Trigger: GACTACAGGCGCCCACCACCATACCTGGCTAATTTT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTAACTTTAAAGTCAACCTaGCCGGGCACAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLTLKST*PGTVAH
Trigger: GTGAGCCACTGTGCCCGGCCAGGTTGACTTTAAAGT...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTCGCTGTACTGCAGCCTaGGCTATGGCACAAATAATA +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRRCTAA*AMAQII
Trigger: TATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGGAAAATGCCAGATTCTaGCTCACTATTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMENARF*LTICPF
Trigger: GAAAGGGCAAATAGTGAGTCAGAATCTGGCATTTTC...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCACAGTGCCAGACAGTTaGAGGCCAGGAATTGCACCA +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSTVPDS*RPGIAP
Trigger: TGGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGGGCACTCACAGTCCCTaGGCTGTGGTTTTTGACAGC +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKGTHSP*AVVFDS
Trigger: GCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCC...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGGGCACTCACAGTCCCTaGGCTGTGGTTTTTGACAGC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLGTHSP*AVVFDS
Trigger: GCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCC...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGGGTGGCAGCATAGGTTaGAAGGCGGAGACTGGAATC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLGGSIG*KAETGI
Trigger: GATTCCAGTCTCCGCCTTTCAACCTATGCTGCCACC...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR TCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTTTAAGTTCACCGTTTTaGCAACTCTGGCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRLSSPF*QLWQLA
Trigger: AGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAA...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGTTGAAGGCCAGGAATTaGACCATCCCAAATCATCAT +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMLKARN*TIPNHH
Trigger: ATGATGATTTGGGATGGTGCAATTCCTGGCCTTCAA...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTCAACATGGAATGCCATaGTGTACCACAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRQHGMP*CTTVKL
Trigger: AAGCTTGACTGTGGTACAGCATGGCATTCCATGTTG...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTCCACAAGACAAAGATaGACGACGCTGGCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSSTRQR*TTLASH
Trigger: ATGGCTCGCCAGCGTCGTGCATCTTTGTCTTGTGGA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAGCATGCCATGGTAACTaGAGCAGGTGGCTCTTAGGC +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIACHGN*SRWLLG
Trigger: GCCTAAGAGCCACCTGCTGCAGTTACCATGGCATGC...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGGCTGCTGCCACCTGGTaGATCAACTCAGCATGCCAT +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKAAATW*INSACH
Trigger: ATGGCATGCTGAGTTGATGCACCAGGTGGCAGCAGC...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAGCTGCTGCCACCTGGTaGATCAACTCAGCATGCCAT +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIAAATW*INSACH
Trigger: ATGGCATGCTGAGTTGATGCACCAGGTGGCAGCAGC...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATAATAACGGATGGCTaGTGCCACCTGGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIIITDG*CHLVHQ
Trigger: TTGATGCACCAGGTGGCAGCAGCCATCCGTTATTAT...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCGAGACTGGAATCGCCTaGCAAGCCTCCTCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIETGIA*QASSLG
Trigger: ACCCAAAGAGGAGGCTTGGCAGGCGATTCCAGTCTC...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR GCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGGAGACTGGAATCGCCTaGCAAGCCTCCTCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLETGIA*QASSLG
Trigger: ACCCAAAGAGGAGGCTTGGCAGGCGATTCCAGTCTC...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR GCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAACAACTCTGGCAGCTTaGTACAAATTGCCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKTTLAA*YKLPVP
Trigger: GGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTCATCAGTGGACTTTGTaGACTGGTCGCGATATTTGC +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIHQWTL*TGRDIC
Trigger: GCAAATATCGCGACCAGTCCACAAAGTCCACTGATG...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGCGAAGAAGAGGACACTaGTGGAGGGCGTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLRRRGH*WRACIG
Trigger: TCCTATGCACGCCCTCCACCAGTGTCCTCTTCTTCG...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACGTGATGAGGGAAGGCTaGTTCACTCTTCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHVMREG*FTLRRR
Trigger: TCTTCTTCGAAGAGTGAACCAGCCTTCCCTCATCAC...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTAAAGATGCACGACGCTaGCGAGCCATACTACTTAAC +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIKDARR*RAILLN
Trigger: GTTAAGTAGTATGGCTCGCCAGCGTCGTGCATCTTT...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAAAAGATGCACGACGCTaGCGAGCCATACTACTTAAC +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKKDARR*RAILLN
Trigger: GTTAAGTAGTATGGCTCGCCAGCGTCGTGCATCTTT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGCAAGGATCACACTTATaGCTCTGTTATCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMQGSHL*LCYLSL
Trigger: CAGGGAAAGATAACAGAGCCATAAGTGTGATCCTTG...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCATGGCTGCTGCCACCTaGTGCATCAACTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIMAAAT*CINSAC
Trigger: GCATGCTGAGTTGATGCACCAGGTGGCAGCAGCCAT...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATGGCTGCTGCCACCTaGTGCATCAACTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLMAAAT*CINSAC
Trigger: GCATGCTGAGTTGATGCACCAGGTGGCAGCAGCCAT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGTTGAAAGGCGGAGACTaGAATCGCCTGCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKLKGGD*NRLPSL
Trigger: GAGGCTTGGCAGGCGATTCCAGTCTCCGCCTTTCAA...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGTCAATCGGCCTGCGGTaGCAGCATAGGTTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLSIGLR*QHRLKG
Trigger: GCCTTTCAACCTATGCTGCCACCGCAGGCCGATTGA...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR TCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACACTGCATTAGGCATCTaGTTTGTCTTCACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHTALGI*FVFTSH
Trigger: GTGGGAAGTGAAGACAAATCAGATGCCTAATGCAGT...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCAGTTTCTGGTATGTCTaGGGTATTTTGGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSSFWYV*GILVPR
Trigger: TCTTGGAACCAAAATACCTCAGACATACCAGAAACT...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTGAAAATGCCAGATTCTaGCTCACTATTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRENARF*LTICPF
Trigger: GAAAGGGCAAATAGTGAGTCAGAATCTGGCATTTTC...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAACAAATCATCATCATCTaGCAGGGAGGACATGCAGAA +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKQIIII*QGGHAE
Trigger: TTCTGCATGTCCTCCCTGTCAGATGATGATGATTTG...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTCAAATCATCATCATCTaGCAGGGAGGACATGCAGAA +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIQIIII*QGGHAE
Trigger: TTCTGCATGTCCTCCCTGTCAGATGATGATGATTTG...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAACAGTGCCAGACAGTTaGAGGCCAGGAATTGCACCA +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKITVPDS*RPGIAP
Trigger: TGGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGT...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGACAGTGCCAGACAGTTaGAGGCCAGGAATTGCACCA +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKTVPDS*RPGIAP
Trigger: TGGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTATTGCTTCCCTTATaGAAGCACAGTCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKLLLPL*KHSRVP
Trigger: AGGCACACGACTGTGCTTTCATAAGGGAAGCAATAA...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTTTATTGCTTCCCTTATaGAAGCACAGTCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKILLLPL*KHSRVP
Trigger: AGGCACACGACTGTGCTTTCATAAGGGAAGCAATAA...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCAGCCACAGTTTTTACTaGATCCAGATCTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSSHSFY*IQILQS
Trigger: ACTTTGCAAGATCTGGATTCAGTAAAAACTGTGGCT...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp AAACGTTTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCGGCACTCACAGTCCCTaGGCTGTGGTTTTTGACAGC +
Preference number: 4 (lower is better)
Translates to: KRFCSSAKAFASNVYILLGTHSP*AVVFDS
Trigger: GCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCC...GAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAACGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR TCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTGGCACTCACAGTCCCTaGGCTGTGGTTTTTGACAGC +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSGTHSP*AVVFDS
Trigger: GCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCC...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCGTTTGGCACAGATGCTaGGCCATGTGGTGGTTACTA +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSVWHRC*AMWWLL
Trigger: TAGTAACCACCACATGGCTCAGCATCTGTGCCAAAC...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTATTTCCAGCTTCTACTaGGGACAGCTCTTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRISSFY*GQLLSS
Trigger: TGAACTTAAGAGCTGTCCTCAGTAGAAGCTGGAAAT...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAAGGATCACTTTGAACTaGCTGAAGTTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKRITLN*LKFRKV
Trigger: GACCTTCCTGAACTTCAGGCAGTTCAAAGTGATCCT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCAGGACATGCAGAAAATaGCAGATTCTGACTCACTAT +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSRTCRK*QILTHY
Trigger: ATAGTGAGTCAGAATCTGGCATTTTCTGCATGTCCT...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTTTGAAGGCCAGGAATTaGACCATCCCAAATCATCAT +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRLKARN*TIPNHH
Trigger: ATGATGATTTGGGATGGTGCAATTCCTGGCCTTCAA...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTCAACATGGAATGCCATaGTGTACCACAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIQHGMP*CTTVKL
Trigger: AAGCTTGACTGTGGTACAGCATGGCATTCCATGTTG...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATATCCACAAGACAAAGATaGACGACGCTGGCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKISTRQR*TTLASH
Trigger: ATGGCTCGCCAGCGTCGTGCATCTTTGTCTTGTGGA...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGTCCACAAGACAAAGATaGACGACGCTGGCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKSTRQR*TTLASH
Trigger: ATGGCTCGCCAGCGTCGTGCATCTTTGTCTTGTGGA...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTACTGAATCCAGATCTTaGAAAGTCTTGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKITESRS*KVLTTR
Trigger: CCTGGTGGTCAAGACTTTGCAAGATCTGGATTCAGT...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAACTGAATCCAGATCTTaGAAAGTCTTGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKTESRS*KVLTTR
Trigger: CCTGGTGGTCAAGACTTTGCAAGATCTGGATTCAGT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTGCATGCCATGGTAACTaGAGCAGGTGGCTCTTAGGC +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSACHGN*SRWLLG
Trigger: GCCTAAGAGCCACCTGCTGCAGTTACCATGGCATGC...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCATAACGGATGGCTGCTaGCACCTGGTGCATCAACTC +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIITDGC*HLVHQL
Trigger: GAGTTGATGCACCAGGTGGCAGCAGCCATCCGTTAT...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATAACGGATGGCTGCTaGCACCTGGTGCATCAACTC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLITDGC*HLVHQL
Trigger: GAGTTGATGCACCAGGTGGCAGCAGCCATCCGTTAT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGAGTAAGTGCAAAGTCTaGCCCCACCATAAAGATTAT +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMSKCKV*PHHKDY
Trigger: ATAATCTTTATGGTGGGGGCAGACTTTGCACTTACT...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGTTAAAGTGCAAGTGTTaGACTGCAGTAAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMLKCKC*TAVSAK
Trigger: CTTTGCACTTACTGCAGTGCAACACTTGCACTTTAA...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGGGAGGAAAATTAAAGTaGAAGTGTTGCACTGCAGTA +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMGGKLK*KCCTAV
Trigger: TACTGCAGTGCAACACTTGCACTTTAATTTTCCTCC...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGCACACCATGTTATGGTaGTCTGACAAACCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLHTMLW*SDKPVA
Trigger: GGCGACGGGTTTGTCAGAGCACCATAACATGGTGTG...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468410.5
ENST00000640195.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCCCCTACAGCAGGTCCTaGAGTTTCCAACATTCACCA +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSPYSRS*SFQHSP
Trigger: TGGTGAATGTTGGAAACTGCAGGACCTGCTGTAGGG...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR GCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTACAGCTTGCTACAAATTaGCAGTTCCCCGTACAATCC +
Preference number: 4 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLQLATN*QFPVQS
Trigger: GGATTGTACGGGGAACTGGCAATTTGTAGCAAGCTG...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTCCCACACCATGTTATaGTGCTCTGACTGCCGCGAA +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSISHTML*CSDCRE
Trigger: TTCGCGGCAGTCAGAGCACCATAACATGGTGTGGGA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222574.9
ENST00000638303.2
CDS-3UTR CCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTACATCTGAACTCAGCTaGTACATGCCAGATTGGGTA +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKITSELS*YMPDWV
Trigger: TACCCAATCTGGCATGTACCAGCTGAGTTCAGATGT...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACGTGGACTTTGTGGACTaGTCGCGATATTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHVDFVD*SRYLPI
Trigger: AATTGGCAAATATCGCGACCAGTCCACAAAGTCCAC...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTGTGGACTTTGTGGACTaGTCGCGATATTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIVDFVD*SRYLPI
Trigger: AATTGGCAAATATCGCGACCAGTCCACAAAGTCCAC...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTACATCAGTGGACTTTGTaGACTGGTCGCGATATTTGC +
Preference number: 4 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLHQWTL*TGRDIC
Trigger: GCAAATATCGCGACCAGTCCACAAAGTCCACTGATG...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTCCTTTCGTGTCTTACTaGTGTTTCCTCCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIPFVSY*CFLLPM
Trigger: CATTGGAAGGAGGAAACACCAGTAAGACACGAAAGG...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAACCTTTCGTGTCTTACTaGTGTTTCCTCCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKPFVSY*CFLLPM
Trigger: CATTGGAAGGAGGAAACACCAGTAAGACACGAAAGG...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTCCCACACCATGTTATaGTGCTCTGACAAACCCGTC +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSSHTML*CSDKPV
Trigger: GACGGGTTTGTCAGAGCACCATAACATGGTGTGGGA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468410.5
ENST00000640195.1
3UTR CAA 72 bp CAGCTTCTACTGAGGACAGCTCTTAAGTTCACCGTTTaGACAACTCTGGCAGCTTGCTACAAATTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: QLLLRTALKFTV*TTLAACYKLPV
Trigger: AACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAGTAGAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTACAGTGCCAGACAGTTaGAGGCCAGGAATTGCACCA +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSTVPDS*RPGIAP
Trigger: TGGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTATTATTGCTTCCCTTATaGAAGCACAGTCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLLLLPL*KHSRVP
Trigger: AGGCACACGACTGTGCTTTCATAAGGGAAGCAATAA...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAGATCTTGCAAAGTCTTaGCCACCAGGTCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIDLAKS*PPGPPQ
Trigger: TTGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATC...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCGATCTTGCAAAGTCTTaGCCACCAGGTCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIDLAKS*PPGPPQ
Trigger: TTGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATC...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGGATCTTGCAAAGTCTTaGCCACCAGGTCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLDLAKS*PPGPPQ
Trigger: TTGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATC...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGATAGCACCATTACAGTaGCTATATCCCAATGCTATT +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMIAPLQ*LYPNAI
Trigger: AATAGCATTGGGATATAGTCACTGTAATGGTGCTAT...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATCTGAGGTGGGAGGATTaGGCCTGGGAGATACAGGCT +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNLRWED*AWEIQA
Trigger: AGCCTGTATCTCCCAGGCTCAATCCTCCCACCTCAG...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAATTTCCAGCTTCTACTaGGGACAGCTCTTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKISSFY*GQLLSS
Trigger: TGAACTTAAGAGCTGTCCTCAGTAGAAGCTGGAAAT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCAAATTCTCATTACACTaGAGCAACTCCAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSKFSLH*SNSNES
Trigger: TGACTCATTGGAGTTGCTGCAGTGTAATGAGAATTT...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGAAATCTTCAACATCTTaGCATTCCTTATTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMKSSTS*HSLLLP
Trigger: GGGAAGCAATAAGGAATGGCAAGATGTTGAAGATTT...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTACAACATGGAATGCCATaGTGTACCACAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLQHGMP*CTTVKL
Trigger: AAGCTTGACTGTGGTACAGCATGGCATTCCATGTTG...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTTCCACAAGACAAAGATaGACGACGCTGGCGAGCCAT +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSSTRQR*TTLASH
Trigger: ATGGCTCGCCAGCGTCGTGCATCTTTGTCTTGTGGA...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATAATAACGGATGGCTaGTGCCACCTGGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSIITDG*CHLVHQ
Trigger: TTGATGCACCAGGTGGCAGCAGCCATCCGTTATTAT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGTTGCACTGCAGTAAGTaGAAAGTCTGCCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLLHCSK*KVCPHH
Trigger: ATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAA...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTTGCACTGCAGTAAGTaGAAAGTCTGCCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSILHCSK*KVCPHH
Trigger: ATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGCCCTACAGCAGGTCCTaGAGTTTCCAACATTCACCA +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLPYSRS*SFQHSP
Trigger: TGGTGAATGTTGGAAACTGCAGGACCTGCTGTAGGG...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTCTGTGTATGAACAGTaGTGTTCTTGGGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSSVYEQ*CSWGPQ
Trigger: CTGTGGACCCCAAGAACAGCACTGTTCATACACAGA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTAGTGGACTTTGTGGACTaGTCGCGATATTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLVDFVD*SRYLPI
Trigger: AATTGGCAAATATCGCGACCAGTCCACAAAGTCCAC...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCAAAGATGCACGACGCTaGCGAGCCATACTACTTAAC +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSKDARR*RAILLN
Trigger: GTTAAGTAGTATGGCTCGCCAGCGTCGTGCATCTTT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCCATGAAGGCATTCATTaGTCTTTTGCACTTATTAGG +
Preference number: 4 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSHEGIH*SFALIR
Trigger: CCTAATAAGTGCAAAAGACCAATGAATGCCTTCATG...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCAAGGATCACACTTATaGCTCTGTTATCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHQGSHL*LCYLSL
Trigger: CAGGGAAAGATAACAGAGCCATAAGTGTGATCCTTG...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCGGAAATAATAACGGATaGCTGCTGCCACCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIGNNNG*LLPPGA
Trigger: TGCACCAGGTGGCAGCAGCCATCCGTTATTATTTCC...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGGGAAATAATAACGGATaGCTGCTGCCACCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLGNNNG*LLPPGA
Trigger: TGCACCAGGTGGCAGCAGCCATCCGTTATTATTTCC...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCAACTTTACCTTGGCCTaGGCTAGGTCTCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSNFTLA*ARSPLE
Trigger: TTCCAATGGAGACCTAGCCCAGGCCAAGGTAAAGTT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCAAAGCTACAAAAACCTaGCTGTCCACTTCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSKATKT*LSTSPG
Trigger: ACCAGGCGAAGTGGACAGCCAGGTTTTTGTAGCTTT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGTCCCACACCATGTTATaGTGCTCTGACAAACCCGTC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLSHTML*CSDKPV
Trigger: GACGGGTTTGTCAGAGCACCATAACATGGTGTGGGA...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468410.5
ENST00000640195.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCACTGCATTAGGCATCTaGTTTGTCTTCACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSTALGI*FVFTSH
Trigger: GTGGGAAGTGAAGACAAATCAGATGCCTAATGCAGT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACGATCTTGGGTATTCTTaGTGTGAAACATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHDLGYS*CETSEL
Trigger: GAGTTCAGATGTTTCACATCAAGAATACCCAAGATC...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACAGTTTCTGGTATGTCTaGGGTATTTTGGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHSFWYV*GILVPR
Trigger: TCTTGGAACCAAAATACCTCAGACATACCAGAAACT...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCCAAATCATCATCATCTaGCAGGGAGGACATGCAGAA +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSQIIII*QGGHAE
Trigger: TTCTGCATGTCCTCCCTGTCAGATGATGATGATTTG...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTTATTGCTTCCCTTATaGAAGCACAGTCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSLLLPL*KHSRVP
Trigger: AGGCACACGACTGTGCTTTCATAAGGGAAGCAATAA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTCATACATCGCCAATATaGACTTCACAACATGGAATG +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIHTSPI*TSQHGM
Trigger: CATTCCATGTTGTGAAGTTCATATTGGCGATGTATG...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTGATCTTGCAAAGTCTTaGCCACCAGGTCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSDLAKS*PPGPPQ
Trigger: TTGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATC...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAGGCACTCACAGTCCCTaGGCTGTGGTTTTTGACAGC +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILGTHSP*AVVFDS
Trigger: GCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCC...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATGGCACTCACAGTCCCTaGGCTGTGGTTTTTGACAGC +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNGTHSP*AVVFDS
Trigger: GCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCC...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTATGGTCACACGAATTaGGGACAAATGGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSYGHTN*GQMVRP
Trigger: AGGTCTCACCATTTGTCCTCAATTCGTGTGACCATA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTGCTATCCTCTGTGTATaGACAGTGCTGTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSAILCV*TVLFLG
Trigger: CCCCAAGAACAGCACTGTTCATACACAGAGGATAGC...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTCAGGAGTTTCTGTACTaGATTAGGCATCTGATTTGT +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIQEFLY*IRHLIC
Trigger: ACAAATCAGATGCCTAATGCAGTACAGAAACTCCTG...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTAAATTCTCATTACACTaGAGCAACTCCAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRKFSLH*SNSNES
Trigger: TGACTCATTGGAGTTGCTGCAGTGTAATGAGAATTT...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCAGGATCACTTTGAACTaGCTGAAGTTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSRITLN*LKFRKV
Trigger: GACCTTCCTGAACTTCAGGCAGTTCAAAGTGATCCT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTAGGACATGCAGAAAATaGCAGATTCTGACTCACTAT +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIRTCRK*QILTHY
Trigger: ATAGTGAGTCAGAATCTGGCATTTTCTGCATGTCCT...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTATTGAAGGCCAGGAATTaGACCATCCCAAATCATCAT +
Preference number: 4 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLLKARN*TIPNHH
Trigger: ATGATGATTTGGGATGGTGCAATTCCTGGCCTTCAA...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAACTTGCCATTCCTTATTaGTTCCCTTATGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKLAIPY*FPYEST
Trigger: TGTGCTTTCATAAGGGAAGCAATAAGGAATGGCAAG...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTCTTGCCATTCCTTATTaGTTCCCTTATGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKILAIPY*FPYEST
Trigger: TGTGCTTTCATAAGGGAAGCAATAAGGAATGGCAAG...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCCAACATGGAATGCCATaGTGTACCACAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSQHGMP*CTTVKL
Trigger: AAGCTTGACTGTGGTACAGCATGGCATTCCATGTTG...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCACTGAATCCAGATCTTaGAAAGTCTTGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSTESRS*KVLTTR
Trigger: CCTGGTGGTCAAGACTTTGCAAGATCTGGATTCAGT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAGCTGCTGCCACCTGGTaGATCAACTCAGCATGCCAT +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILAAATW*INSACH
Trigger: ATGGCATGCTGAGTTGATGCACCAGGTGGCAGCAGC...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATAATAACGGATGGCTaGTGCCACCTGGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLIITDG*CHLVHQ
Trigger: TTGATGCACCAGGTGGCAGCAGCCATCCGTTATTAT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCATAATAACGGATGGCTaGTGCCACCTGGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIIITDG*CHLVHQ
Trigger: TTGATGCACCAGGTGGCAGCAGCCATCCGTTATTAT...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAGTGCAAGTGTTGCACTaGAGTAAGTGCAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIVQVLH*SKCKVC
Trigger: GCAGACTTTGCACTTACTGCAGTGCAACACTTGCAC...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCGTGCAAGTGTTGCACTaGAGTAAGTGCAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIVQVLH*SKCKVC
Trigger: GCAGACTTTGCACTTACTGCAGTGCAACACTTGCAC...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGGTGCAAGTGTTGCACTaGAGTAAGTGCAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKVQVLH*SKCKVC
Trigger: GCAGACTTTGCACTTACTGCAGTGCAACACTTGCAC...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTTTAAAGTGCAAGTGTTaGACTGCAGTAAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKILKCKC*TAVSAK
Trigger: CTTTGCACTTACTGCAGTGCAACACTTGCACTTTAA...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTGGAGGAAAATTAAAGTaGAAGTGTTGCACTGCAGTA +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIGGKLK*KCCTAV
Trigger: TACTGCAGTGCAACACTTGCACTTTAATTTTCCTCC...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAACTCGAGTGTAGAGTaGACAGCGGAGAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSINSSVE*TAESET
Trigger: TGTTTCACTCTCCGCTGTGCACTCTACACTCGAGTT...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTCTGTGTATGAACAGTaGTGTTCTTGGGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSISVYEQ*CSWGPQ
Trigger: CTGTGGACCCCAAGAACAGCACTGTTCATACACAGA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCACATCTGAACTCAGCTaGTACATGCCAGATTGGGTA +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSTSELS*YMPDWV
Trigger: TACCCAATCTGGCATGTACCAGCTGAGTTCAGATGT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAATGTCTGAGGTATTTTaGTTCCAAGATGATCTTGGG +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKMSEVF*FQDDLG
Trigger: CCCAAGATCATCTTGGAACCAAAATACCTCAGACAT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCGTGGACTTTGTGGACTaGTCGCGATATTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSVDFVD*SRYLPI
Trigger: AATTGGCAAATATCGCGACCAGTCCACAAAGTCCAC...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATACATCAGTGGACTTTGTaGACTGGTCGCGATATTTGC +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIHQWTL*TGRDIC
Trigger: GCAAATATCGCGACCAGTCCACAAAGTCCACTGATG...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGCATCAGTGGACTTTGTaGACTGGTCGCGATATTTGC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLHQWTL*TGRDIC
Trigger: GCAAATATCGCGACCAGTCCACAAAGTCCACTGATG...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTACGAAGAAGAGGACACTaGTGGAGGGCGTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILRRRGH*WRACIG
Trigger: TCCTATGCACGCCCTCCACCAGTGTCCTCTTCTTCG...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGGTGATGAGGGAAGGCTaGTTCACTCTTCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLVMREG*FTLRRR
Trigger: TCTTCTTCGAAGAGTGAACCAGCCTTCCCTCATCAC...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCGTGATGAGGGAAGGCTaGTTCACTCTTCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIVMREG*FTLRRR
Trigger: TCTTCTTCGAAGAGTGAACCAGCCTTCCCTCATCAC...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGAAAGATGCACGACGCTaGCGAGCCATACTACTTAAC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLKDARR*RAILLN
Trigger: GTTAAGTAGTATGGCTCGCCAGCGTCGTGCATCTTT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGAAAGATGCACGACGCTaGCGAGCCATACTACTTAAC +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKKDARR*RAILLN
Trigger: GTTAAGTAGTATGGCTCGCCAGCGTCGTGCATCTTT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGAACTTTACCTTGGCCTaGGCTAGGTCTCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLNFTLA*ARSPLE
Trigger: TTCCAATGGAGACCTAGCCCAGGCCAAGGTAAAGTT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGAAAGCTACAAAAACCTaGCTGTCCACTTCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLKATKT*LSTSPG
Trigger: ACCAGGCGAAGTGGACAGCCAGGTTTTTGTAGCTTT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTCCTGTTATCTTTCCCTaGATACATCTGAGTATATTC +
Preference number: 4 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRPVIFP*IHLSIF
Trigger: GAATATACTCAGATGTATCCAGGGAAAGATAACAGG...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGACTGCATTAGGCATCTaGTTTGTCTTCACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLTALGI*FVFTSH
Trigger: GTGGGAAGTGAAGACAAATCAGATGCCTAATGCAGT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTAGATCTTGGGTATTCTTaGTGTGAAACATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLDLGYS*CETSEL
Trigger: GAGTTCAGATGTTTCACATCAAGAATACCCAAGATC...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAATTTTGGTTCCAAGATaGTCTTGGGTATTCTTGATG +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKILVPR*SWVFLM
Trigger: CATCAAGAATACCCAAGATCATCTTGGAACCAAAAT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCCAAATCATCATCATCTaGCAGGGAGGACATGCAGAA +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIQIIII*QGGHAE
Trigger: TTCTGCATGTCCTCCCTGTCAGATGATGATGATTTG...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATACAAATCATCATCATCTaGCAGGGAGGACATGCAGAA +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIQIIII*QGGHAE
Trigger: TTCTGCATGTCCTCCCTGTCAGATGATGATGATTTG...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAACAGTGCCAGACAGTTaGAGGCCAGGAATTGCACCA +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILTVPDS*RPGIAP
Trigger: TGGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTTATTGCTTCCCTTATaGAAGCACAGTCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSILLLPL*KHSRVP
Trigger: AGGCACACGACTGTGCTTTCATAAGGGAAGCAATAA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGTTATTGCTTCCCTTATaGAAGCACAGTCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLLLLPL*KHSRVP
Trigger: AGGCACACGACTGTGCTTTCATAAGGGAAGCAATAA...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTACATACATCGCCAATATaGACTTCACAACATGGAATG +
Preference number: 4 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLHTSPI*TSQHGM
Trigger: CATTCCATGTTGTGAAGTTCATATTGGCGATGTATG...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTAAGCCACAGTTTTTACTaGATCCAGATCTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLSHSFY*IQILQS
Trigger: ACTTTGCAAGATCTGGATTCAGTAAAAACTGTGGCT...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTTTGGCAAAAAGCATaGAGGCATTCATTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKFWQKA*RHSLVF
Trigger: AAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAA...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTATGGTCACACGAATTaGGGACAAATGGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIYGHTN*GQMVRP
Trigger: AGGTCTCACCATTTGTCCTCAATTCGTGTGACCATA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTACACACCATGTTATGGTaGTCTGACTGCCGCGAAGTG +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILHTMLW*SDCREV
Trigger: CACTTCGCGGCAGTCAGAGCACCATAACATGGTGTG...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222574.9
ENST00000638303.2
CDS-3UTR GCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTAAATTCTCATTACACTaGAGCAACTCCAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIKFSLH*SNSNES
Trigger: TGACTCATTGGAGTTGCTGCAGTGTAATGAGAATTT...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAAGGATCACTTTGAACTaGCTGAAGTTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIRITLN*LKFRKV
Trigger: GACCTTCCTGAACTTCAGGCAGTTCAAAGTGATCCT...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGAGGATCACTTTGAACTaGCTGAAGTTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLRITLN*LKFRKV
Trigger: GACCTTCCTGAACTTCAGGCAGTTCAAAGTGATCCT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGAGGATCACTTTGAACTaGCTGAAGTTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKRITLN*LKFRKV
Trigger: GACCTTCCTGAACTTCAGGCAGTTCAAAGTGATCCT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAAAATCTTCAACATCTTaGCATTCCTTATTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LRTALKFTVLTTLAACYKKSSTS*HSLLLP
Trigger: GGGAAGCAATAAGGAATGGCAAGATGTTGAAGATTT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGCAACATGGAATGCCATaGTGTACCACAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKQHGMP*CTTVKL
Trigger: AAGCTTGACTGTGGTACAGCATGGCATTCCATGTTG...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCCAACATGGAATGCCATaGTGTACCACAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIQHGMP*CTTVKL
Trigger: AAGCTTGACTGTGGTACAGCATGGCATTCCATGTTG...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGACTGAATCCAGATCTTaGAAAGTCTTGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKTESRS*KVLTTR
Trigger: CCTGGTGGTCAAGACTTTGCAAGATCTGGATTCAGT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCCCGACTCCCAGCTTCTaGTTCATTTCATCATGTGTA +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIPTPSF*FISSCV
Trigger: TACACATGATGAAATGAAGCAGAAGCTGGGAGTCGG...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGCCGACTCCCAGCTTCTaGTTCATTTCATCATGTGTA +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKPTPSF*FISSCV
Trigger: TACACATGATGAAATGAAGCAGAAGCTGGGAGTCGG...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTAACTCGAGTGTAGAGTaGACAGCGGAGAGTGAAACA +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSNSSVE*TAESET
Trigger: TGTTTCACTCTCCGCTGTGCACTCTACACTCGAGTT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTATCCCACACCATGTTATaGTGCTCTGACTGCCGCGAA +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILSHTML*CSDCRE
Trigger: TTCGCGGCAGTCAGAGCACCATAACATGGTGTGGGA...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222574.9
ENST00000638303.2
CDS-3UTR CCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAACATCTGAACTCAGCTaGTACATGCCAGATTGGGTA +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKITSELS*YMPDWV
Trigger: TACCCAATCTGGCATGTACCAGCTGAGTTCAGATGT...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCGTGGACTTTGTGGACTaGTCGCGATATTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIVDFVD*SRYLPI
Trigger: AATTGGCAAATATCGCGACCAGTCCACAAAGTCCAC...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTGTGATGAGGGAAGGCTaGTTCACTCTTCGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSVMREG*FTLRRR
Trigger: TCTTCTTCGAAGAGTGAACCAGCCTTCCCTCATCAC...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGCCTTTCGTGTCTTACTaGTGTTTCCTCCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKPFVSY*CFLLPM
Trigger: CATTGGAAGGAGGAAACACCAGTAAGACACGAAAGG...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCCCTTTCGTGTCTTACTaGTGTTTCCTCCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIPFVSY*CFLLPM
Trigger: CATTGGAAGGAGGAAACACCAGTAAGACACGAAAGG...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATACCTTTCGTGTCTTACTaGTGTTTCCTCCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIPFVSY*CFLLPM
Trigger: CATTGGAAGGAGGAAACACCAGTAAGACACGAAAGG...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTAAAGATGCACGACGCTaGCGAGCCATACTACTTAAC +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSKDARR*RAILLN
Trigger: GTTAAGTAGTATGGCTCGCCAGCGTCGTGCATCTTT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCACAGTCCCTGAGCTGTaGTTTTTGACAGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSITVPEL*FLTALA
Trigger: TGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGT...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGACAGTCCCTGAGCTGTaGTTTTTGACAGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLTVPEL*FLTALA
Trigger: TGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTCATGAAGGCATTCATTaGTCTTTTGCACTTATTAGG +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIHEGIH*SFALIR
Trigger: CCTAATAAGTGCAAAAGACCAATGAATGCCTTCATG...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCCAAGGATCACACTTATaGCTCTGTTATCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSQGSHL*LCYLSL
Trigger: CAGGGAAAGATAACAGAGCCATAAGTGTGATCCTTG...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCGATCTTGGGTATTCTTaGTGTGAAACATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSDLGYS*CETSEL
Trigger: GAGTTCAGATGTTTCACATCAAGAATACCCAAGATC...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTAATTTTGGTTCCAAGATaGTCTTGGGTATTCTTGATG +
Preference number: 4 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLILVPR*SWVFLM
Trigger: CATCAAGAATACCCAAGATCATCTTGGAACCAAAAT...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCAGTTTCTGGTATGTCTaGGGTATTTTGGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSSFWYV*GILVPR
Trigger: TCTTGGAACCAAAATACCTCAGACATACCAGAAACT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGGAAAATGCCAGATTCTaGCTCACTATTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKENARF*LTICPF
Trigger: GAAAGGGCAAATAGTGAGTCAGAATCTGGCATTTTC...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGGAAAATGCCAGATTCTaGCTCACTATTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLENARF*LTICPF
Trigger: GAAAGGGCAAATAGTGAGTCAGAATCTGGCATTTTC...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTTTATTGCTTCCCTTATaGAAGCACAGTCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSLLLPL*KHSRVP
Trigger: AGGCACACGACTGTGCTTTCATAAGGGAAGCAATAA...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCCATACATCGCCAATATaGACTTCACAACATGGAATG +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSHTSPI*TSQHGM
Trigger: CATTCCATGTTGTGAAGTTCATATTGGCGATGTATG...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCAGCCACAGTTTTTACTaGATCCAGATCTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSSHSFY*IQILQS
Trigger: ACTTTGCAAGATCTGGATTCAGTAAAAACTGTGGCT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTATTTTGGCAAAAAGCATaGAGGCATTCATTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLFWQKA*RHSLVF
Trigger: AAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAA...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATTGAGGACAAATGGTaGGACCTTGATCTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSIEDKW*DLDLLK
Trigger: CTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAAT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTAGGATCACTTTGAACTaGCTGAAGTTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSRITLN*LKFRKV
Trigger: GACCTTCCTGAACTTCAGGCAGTTCAAAGTGATCCT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCAGGACATGCAGAAAATaGCAGATTCTGACTCACTAT +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSRTCRK*QILTHY
Trigger: ATAGTGAGTCAGAATCTGGCATTTTCTGCATGTCCT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTTGAAGGCCAGGAATTaGACCATCCCAAATCATCAT +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSILKARN*TIPNHH
Trigger: ATGATGATTTGGGATGGTGCAATTCCTGGCCTTCAA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGTTGAAGGCCAGGAATTaGACCATCCCAAATCATCAT +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLLKARN*TIPNHH
Trigger: ATGATGATTTGGGATGGTGCAATTCCTGGCCTTCAA...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGTTGAAGGCCAGGAATTaGACCATCCCAAATCATCAT +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKLKARN*TIPNHH
Trigger: ATGATGATTTGGGATGGTGCAATTCCTGGCCTTCAA...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTACTGAATCCAGATCTTaGAAAGTCTTGACCACCAGG +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSTESRS*KVLTTR
Trigger: CCTGGTGGTCAAGACTTTGCAAGATCTGGATTCAGT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCAGTAAGTGCAAAGTCTaGCCCCACCATAAAGATTAT +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSSKCKV*PHHKDY
Trigger: ATAATCTTTATGGTGGGGGCAGACTTTGCACTTACT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTTAAAGTGCAAGTGTTaGACTGCAGTAAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSLKCKC*TAVSAK
Trigger: CTTTGCACTTACTGCAGTGCAACACTTGCACTTTAA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCGGAGGAAAATTAAAGTaGAAGTGTTGCACTGCAGTA +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSGGKLK*KCCTAV
Trigger: TACTGCAGTGCAACACTTGCACTTTAATTTTCCTCC...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCAAAAGCAGCTGTATTaGCAATGTATTTGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHQKQLY*QCICSN
Trigger: ATTAGAGCAAATACATTGGCAATACAGCTGCTTTTG...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTGTGGACTTTGTGGACTaGTCGCGATATTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSVDFVD*SRYLPI
Trigger: AATTGGCAAATATCGCGACCAGTCCACAAAGTCCAC...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp TTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCTCTTCAACAGTCCCTGAGCTGTaGTTTTTGACAGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: FCSSAKAFASNVYILLSSTVPEL*FLTALA
Trigger: TGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGT...TGAAGAGAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR CCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTACAGTCCCTGAGCTGTaGTTTTTGACAGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSTVPEL*FLTALA
Trigger: TGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp AAACGTTTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCACAGTCCCTGAGCTGTaGTTTTTGACAGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KRFCSSAKAFASNVYILLTVPEL*FLTALA
Trigger: TGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGT...GAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAACGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR CCA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTTCTGTTATCTTTCCCTaGATACATCTGAGTATATTC +
Preference number: 4 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKISVIFP*IHLSIF
Trigger: GAATATACTCAGATGTATCCAGGGAAAGATAACAGA...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACTCTGTTATCTTTCCCTaGATACATCTGAGTATATTC +
Preference number: 4 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHSVIFP*IHLSIF
Trigger: GAATATACTCAGATGTATCCAGGGAAAGATAACAGA...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCCAAGGATCACACTTATaGCTCTGTTATCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIQGSHL*LCYLSL
Trigger: CAGGGAAAGATAACAGAGCCATAAGTGTGATCCTTG...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGCAAGGATCACACTTATaGCTCTGTTATCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKQGSHL*LCYLSL
Trigger: CAGGGAAAGATAACAGAGCCATAAGTGTGATCCTTG...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTCCCACACCATGTTATaGTGCTCTGACTTTATTATG +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSSHTML*CSDFIM
Trigger: CATAATAAAGTCAGAGCACCATAACATGGTGTGGGA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATAAAATTAGCCAGGTATaGTGGTGGGCGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNKISQV*WWAPVV
Trigger: GACTACAGGCGCCCACCACCATACCTGGCTAATTTT...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCGGAGTTATATCCAGGTaGAGATGGCAAATTCTCATT +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIGVISR*RWQILI
Trigger: AATGAGAATTTGCCATCTTCACCTGGATATAACTCC...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGGATCTTGGGTATTCTTaGTGTGAAACATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLDLGYS*CETSEL
Trigger: GAGTTCAGATGTTTCACATCAAGAATACCCAAGATC...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCGATCTTGGGTATTCTTaGTGTGAAACATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIDLGYS*CETSEL
Trigger: GAGTTCAGATGTTTCACATCAAGAATACCCAAGATC...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATTTTGGTTCCAAGATaGTCTTGGGTATTCTTGATG +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSILVPR*SWVFLM
Trigger: CATCAAGAATACCCAAGATCATCTTGGAACCAAAAT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAGTTTCTGGTATGTCTaGGGTATTTTGGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSISFWYV*GILVPR
Trigger: TCTTGGAACCAAAATACCTCAGACATACCAGAAACT...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGAGTTTCTGGTATGTCTaGGGTATTTTGGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKSFWYV*GILVPR
Trigger: TCTTGGAACCAAAATACCTCAGACATACCAGAAACT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTGAAAATGCCAGATTCTaGCTCACTATTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSENARF*LTICPF
Trigger: GAAAGGGCAAATAGTGAGTCAGAATCTGGCATTTTC...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCCATACATCGCCAATATaGACTTCACAACATGGAATG +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIHTSPI*TSQHGM
Trigger: CATTCCATGTTGTGAAGTTCATATTGGCGATGTATG...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAGCCACAGTTTTTACTaGATCCAGATCTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSISHSFY*IQILQS
Trigger: ACTTTGCAAGATCTGGATTCAGTAAAAACTGTGGCT...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGAGCCACAGTTTTTACTaGATCCAGATCTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLSHSFY*IQILQS
Trigger: ACTTTGCAAGATCTGGATTCAGTAAAAACTGTGGCT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTTTTGGCAAAAAGCATaGAGGCATTCATTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSFWQKA*RHSLVF
Trigger: AAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATTGAGGACAAATGGTaGGACCTTGATCTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLIEDKW*DLDLLK
Trigger: CTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAAT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGATTGAGGACAAATGGTaGGACCTTGATCTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKIEDKW*DLDLLK
Trigger: CTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAAT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCATTGAGGACAAATGGTaGGACCTTGATCTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIIEDKW*DLDLLK
Trigger: CTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAAT...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGTTTAAGATACATGGCTaGGGAGATACAGAACACGAA +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKFKIHG*GDTEHE
Trigger: TTCGTGTTCTGTATCTCCTCAGCCATGTATCTTAAA...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGTTTAAGATACATGGCTaGGGAGATACAGAACACGAA +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLFKIHG*GDTEHE
Trigger: TTCGTGTTCTGTATCTCCTCAGCCATGTATCTTAAA...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCAAAAACGACTGTAGCTaGAAACTCCCTAAGAATGAA +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSKNDCS*KLPKNE
Trigger: TTCATTCTTAGGGAGTTTTCAGCTACAGTCGTTTTT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR GCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGCAGGAGTTTCTGTACTaGATTAGGCATCTGATTTGT +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLQEFLY*IRHLIC
Trigger: ACAAATCAGATGCCTAATGCAGTACAGAAACTCCTG...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCAAATTCTCATTACACTaGAGCAACTCCAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSKFSLH*SNSNES
Trigger: TGACTCATTGGAGTTGCTGCAGTGTAATGAGAATTT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGAGGACATGCAGAAAATaGCAGATTCTGACTCACTAT +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLRTCRK*QILTHY
Trigger: ATAGTGAGTCAGAATCTGGCATTTTCTGCATGTCCT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTTTGAAGGCCAGGAATTaGACCATCCCAAATCATCAT +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSLKARN*TIPNHH
Trigger: ATGATGATTTGGGATGGTGCAATTCCTGGCCTTCAA...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGCTTGCCATTCCTTATTaGTTCCCTTATGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKLAIPY*FPYEST
Trigger: TGTGCTTTCATAAGGGAAGCAATAAGGAATGGCAAG...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGCTTGCCATTCCTTATTaGTTCCCTTATGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLLAIPY*FPYEST
Trigger: TGTGCTTTCATAAGGGAAGCAATAAGGAATGGCAAG...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGAGTAAGTGCAAAGTCTaGCCCCACCATAAAGATTAT +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKSKCKV*PHHKDY
Trigger: ATAATCTTTATGGTGGGGGCAGACTTTGCACTTACT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTTAAAGTGCAAGTGTTaGACTGCAGTAAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSILKCKC*TAVSAK
Trigger: CTTTGCACTTACTGCAGTGCAACACTTGCACTTTAA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGATGTCTGAGGTATTTTaGTTCCAAGATGATCTTGGG +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKMSEVF*FQDDLG
Trigger: CCCAAGATCATCTTGGAACCAAAATACCTCAGACAT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATGTCTGAGGTATTTTaGTTCCAAGATGATCTTGGG +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLMSEVF*FQDDLG
Trigger: CCCAAGATCATCTTGGAACCAAAATACCTCAGACAT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAATGTCTGAGGTATTTTaGTTCCAAGATGATCTTGGG +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIMSEVF*FQDDLG
Trigger: CCCAAGATCATCTTGGAACCAAAATACCTCAGACAT...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTCCCACACCATGTTATaGTGCTCTGACTTTATTATG +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSISHTML*CSDFIM
Trigger: CATAATAAAGTCAGAGCACCATAACATGGTGTGGGA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
3UTR CAA 72 bp AGTGACTATATCCCAATGCTATTAACTAACTTTACCTaGGCCTGGGCTAGGTCTCCATTGGAAATAATAACG +
Preference number: 4 (lower is better)
Translates to: SDYIPMLLTNFT*AWARSPLEIIT
Trigger: CGTTATTATTTCCAATGGAGACCTAGCCCAGGCCAAGGTAAAGTTAGTTAATAGCATTGGGATATAGTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTGATCTTGGGTATTCTTaGTGTGAAACATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSDLGYS*CETSEL
Trigger: GAGTTCAGATGTTTCACATCAAGAATACCCAAGATC...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATTTTGGTTCCAAGATaGTCTTGGGTATTCTTGATG +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLILVPR*SWVFLM
Trigger: CATCAAGAATACCCAAGATCATCTTGGAACCAAAAT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCATTTTGGTTCCAAGATaGTCTTGGGTATTCTTGATG +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIILVPR*SWVFLM
Trigger: CATCAAGAATACCCAAGATCATCTTGGAACCAAAAT...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATCAAATCATCATCATCTaGCAGGGAGGACATGCAGAA +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNQIIII*QGGHAE
Trigger: TTCTGCATGTCCTCCCTGTCAGATGATGATGATTTG...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCATACATCGCCAATATaGACTTCACAACATGGAATG +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSHTSPI*TSQHGM
Trigger: CATTCCATGTTGTGAAGTTCATATTGGCGATGTATG...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGTTTTGGCAAAAAGCATaGAGGCATTCATTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLFWQKA*RHSLVF
Trigger: AAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAA...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTTTTGGCAAAAAGCATaGAGGCATTCATTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIFWQKA*RHSLVF
Trigger: AAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATATTTTGGCAAAAAGCATaGAGGCATTCATTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIFWQKA*RHSLVF
Trigger: AAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAA...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTATTGAGGACAAATGGTaGGACCTTGATCTTCTTAAG +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSIEDKW*DLDLLK
Trigger: CTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAAT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTATATGGTCACACGAATTaGGGACAAATGGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILYGHTN*GQMVRP
Trigger: AGGTCTCACCATTTGTCCTCAATTCGTGTGACCATA...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATAGCACCATTACAGTaGCTATATCCCAATGCTATT +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLIAPLQ*LYPNAI
Trigger: AATAGCATTGGGATATAGTCACTGTAATGGTGCTAT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGAAAAACGACTGTAGCTaGAAACTCCCTAAGAATGAA +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKKNDCS*KLPKNE
Trigger: TTCATTCTTAGGGAGTTTTCAGCTACAGTCGTTTTT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCAGGAGTTTCTGTACTaGATTAGGCATCTGATTTGT +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSQEFLY*IRHLIC
Trigger: ACAAATCAGATGCCTAATGCAGTACAGAAACTCCTG...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGAAATTCTCATTACACTaGAGCAACTCCAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLKFSLH*SNSNES
Trigger: TGACTCATTGGAGTTGCTGCAGTGTAATGAGAATTT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATAGGATCACTTTGAACTaGCTGAAGTTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNRITLN*LKFRKV
Trigger: GACCTTCCTGAACTTCAGGCAGTTCAAAGTGATCCT...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR GCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAAGGATCACTTTGAACTaGCTGAAGTTCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILRITLN*LKFRKV
Trigger: GACCTTCCTGAACTTCAGGCAGTTCAAAGTGATCCT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTAGGACATGCAGAAAATaGCAGATTCTGACTCACTAT +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSRTCRK*QILTHY
Trigger: ATAGTGAGTCAGAATCTGGCATTTTCTGCATGTCCT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTGCCATTCCTTATTaGTTCCCTTATGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSLAIPY*FPYEST
Trigger: TGTGCTTTCATAAGGGAAGCAATAAGGAATGGCAAG...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAAAATCTTCAACATCTTaGCATTCCTTATTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIKSSTS*HSLLLP
Trigger: GGGAAGCAATAAGGAATGGCAAGATGTTGAAGATTT...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAATCTTCAACATCTTaGCATTCCTTATTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIKSSTS*HSLLLP
Trigger: GGGAAGCAATAAGGAATGGCAAGATGTTGAAGATTT...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTGGAGGAAAATTAAAGTaGAAGTGTTGCACTGCAGTA +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSGGKLK*KCCTAV
Trigger: TACTGCAGTGCAACACTTGCACTTTAATTTTCCTCC...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCCAAAAGCAGCTGTATTaGCAATGTATTTGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSQKQLY*QCICSN
Trigger: ATTAGAGCAAATACATTGGCAATACAGCTGCTTTTG...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGATGAAATTTAGAAGCTaGACTACACAGGTATCTCTC +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKMKFRS*TTQVSL
Trigger: GAGAGATACCTGTGTAGTGCAGCTTCTAAATTTCAT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAGTGGACTTTGTGGACTaGTCGCGATATTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILVDFVD*SRYLPI
Trigger: AATTGGCAAATATCGCGACCAGTCCACAAAGTCCAC...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATGTGGACTTTGTGGACTaGTCGCGATATTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNVDFVD*SRYLPI
Trigger: AATTGGCAAATATCGCGACCAGTCCACAAAGTCCAC...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAACAGTCCCTGAGCTGTaGTTTTTGACAGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILTVPEL*FLTALA
Trigger: TGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATACAGTCCCTGAGCTGTaGTTTTTGACAGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNTVPEL*FLTALA
Trigger: TGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGT...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCCATGAAGGCATTCATTaGTCTTTTGCACTTATTAGG +
Preference number: 4 (lower is better)
Translates to: SHELRTNGETLIFLSLSIHEGIH*SFALIR
Trigger: CCTAATAAGTGCAAAAGACCAATGAATGCCTTCATG...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGCATGAAGGCATTCATTaGTCTTTTGCACTTATTAGG +
Preference number: 4 (lower is better)
Translates to: NAISILWSHELRTNGETLHEGIH*SFALIR
Trigger: CCTAATAAGTGCAAAAGACCAATGAATGCCTTCATG...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTCTGTTATCTTTCCCTaGATACATCTGAGTATATTC +
Preference number: 4 (lower is better)
Translates to: WSHELRTNGETLIFLSLSSVIFP*IHLSIF
Trigger: GAATATACTCAGATGTATCCAGGGAAAGATAACAGA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
3UTR CAA 72 bp TTATGGTCACACGAATTGAGGACAAATGGTGAGACCTaGATCTTCTTAAGTCTTTCCATCAAGAGTCAATGT +
Preference number: 4 (lower is better)
Translates to: LWSHELRTNGET*IFLSLSIKSQC
Trigger: ACATTGACTCTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAGAAAATGCCAGATTCTaGCTCACTATTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILENARF*LTICPF
Trigger: GAAAGGGCAAATAGTGAGTCAGAATCTGGCATTTTC...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATGAAAATGCCAGATTCTaGCTCACTATTTGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNENARF*LTICPF
Trigger: GAAAGGGCAAATAGTGAGTCAGAATCTGGCATTTTC...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp AAACGTTTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCTTTTGGCAAAAAGCATaGAGGCATTCATTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: KRFCSSAKAFASNVYILLFWQKA*RHSLVF
Trigger: AAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAA...GAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAACGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR TCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTTTTTGGCAAAAAGCATaGAGGCATTCATTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSFWQKA*RHSLVF
Trigger: AAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAA...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp TTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCTCTTCATTTTGGCAAAAAGCATaGAGGCATTCATTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: FCSSAKAFASNVYILLSSFWQKA*RHSLVF
Trigger: AAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAA...TGAAGAGAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR TCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTATAGCACCATTACAGTaGCTATATCCCAATGCTATT +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSIAPLQ*LYPNAI
Trigger: AATAGCATTGGGATATAGTCACTGTAATGGTGCTAT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTAAATTCTCATTACACTaGAGCAACTCCAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSKFSLH*SNSNES
Trigger: TGACTCATTGGAGTTGCTGCAGTGTAATGAGAATTT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTAAATCTTCAACATCTTaGCATTCCTTATTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSKSSTS*HSLLLP
Trigger: GGGAAGCAATAAGGAATGGCAAGATGTTGAAGATTT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR GCA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATACAAAAGCAGCTGTATTaGCAATGTATTTGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIQKQLY*QCICSN
Trigger: ATTAGAGCAAATACATTGGCAATACAGCTGCTTTTG...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGCAAAAGCAGCTGTATTaGCAATGTATTTGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKQKQLY*QCICSN
Trigger: ATTAGAGCAAATACATTGGCAATACAGCTGCTTTTG...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGCACACCATGTTATGGTaGTCTGACTTTATTATGAAA +
Preference number: 4 (lower is better)
Translates to: HELRTNGETLIFLSLSIKHTMLW*SDFIMK
Trigger: TTTCATAATAAAGTCAGAGCACCATAACATGGTGTG...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp AAACGTTTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCCATGAAGGCATTCATTaGTCTTTTGCACTTATTAGG +
Preference number: 4 (lower is better)
Translates to: KRFCSSAKAFASNVYILLHEGIH*SFALIR
Trigger: CCTAATAAGTGCAAAAGACCAATGAATGCCTTCATG...GAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAACGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR CCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCATGAAGGCATTCATTaGTCTTTTGCACTTATTAGG +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSHEGIH*SFALIR
Trigger: CCTAATAAGTGCAAAAGACCAATGAATGCCTTCATG...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CCA 90 bp GTTTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCTCTTCATGAAGGCATTCATTaGTCTTTTGCACTTATTAGG +
Preference number: 4 (lower is better)
Translates to: VSVLQPKPLLLMCTFFSLHEGIH*SFALIR
Trigger: CCTAATAAGTGCAAAAGACCAATGAATGCCTTCATG...AAGAGAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR CCA 90 bp CGTTTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCTCTTCTGTTATCTTTCCCTaGATACATCTGAGTATATTC +
Preference number: 4 (lower is better)
Translates to: RFCSSAKAFASNVYILLSSVIFP*IHLSIF
Trigger: GAATATACTCAGATGTATCCAGGGAAAGATAACAGA...AGAGAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR TCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATGATCTTGGGTATTCTTaGTGTGAAACATCTGAACTC +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNDLGYS*CETSEL
Trigger: GAGTTCAGATGTTTCACATCAAGAATACCCAAGATC...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATAGTTTCTGGTATGTCTaGGGTATTTTGGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNSFWYV*GILVPR
Trigger: TCTTGGAACCAAAATACCTCAGACATACCAGAAACT...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTACATACATCGCCAATATaGACTTCACAACATGGAATG +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILHTSPI*TSQHGM
Trigger: CATTCCATGTTGTGAAGTTCATATTGGCGATGTATG...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATCATACATCGCCAATATaGACTTCACAACATGGAATG +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNHTSPI*TSQHGM
Trigger: CATTCCATGTTGTGAAGTTCATATTGGCGATGTATG...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR TCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAAGCCACAGTTTTTACTaGATCCAGATCTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILSHSFY*IQILQS
Trigger: ACTTTGCAAGATCTGGATTCAGTAAAAACTGTGGCT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTACACTAACGTCTCTTTaGAACTTCTATCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSTLTSL*NFYHFF
Trigger: GAAGAAATGATAGAAGTTGCAAAGAGACGTTAGTGT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR GCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCACACCATGTTATGGTaGTCTGACTTTATTATGAAA +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSHTMLW*SDFIMK
Trigger: TTTCATAATAAAGTCAGAGCACCATAACATGGTGTG...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAATGTCTGAGGTATTTTaGTTCCAAGATGATCTTGGG +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILMSEVF*FQDDLG
Trigger: CCCAAGATCATCTTGGAACCAAAATACCTCAGACAT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATATGTCTGAGGTATTTTaGTTCCAAGATGATCTTGGG +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNMSEVF*FQDDLG
Trigger: CCCAAGATCATCTTGGAACCAAAATACCTCAGACAT...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp AAACGTTTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCTCTGTTATCTTTCCCTaGATACATCTGAGTATATTC +
Preference number: 4 (lower is better)
Translates to: KRFCSSAKAFASNVYILLSVIFP*IHLSIF
Trigger: GAATATACTCAGATGTATCCAGGGAAAGATAACAGA...GAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAACGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR CCA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTTCTGTTATCTTTCCCTaGATACATCTGAGTATATTC +
Preference number: 4 (lower is better)
Translates to: ILWSHELRTNGETLIFLSSVIFP*IHLSIF
Trigger: GAATATACTCAGATGTATCCAGGGAAAGATAACAGA...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR TCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAATTTTGGTTCCAAGATaGTCTTGGGTATTCTTGATG +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILILVPR*SWVFLM
Trigger: CATCAAGAATACCCAAGATCATCTTGGAACCAAAAT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR TCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTATTTTGGCAAAAAGCATaGAGGCATTCATTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILFWQKA*RHSLVF
Trigger: AAAGACCAATGAATGCCTTCATGCTTTTTGCCAAAA...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAAAATTCTCATTACACTaGAGCAACTCCAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILKFSLH*SNSNES
Trigger: TGACTCATTGGAGTTGCTGCAGTGTAATGAGAATTT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAAAATCTTCAACATCTTaGCATTCCTTATTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILKSSTS*HSLLLP
Trigger: GGGAAGCAATAAGGAATGGCAAGATGTTGAAGATTT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR GCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATAAATCTTCAACATCTTaGCATTCCTTATTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNKSSTS*HSLLLP
Trigger: GGGAAGCAATAAGGAATGGCAAGATGTTGAAGATTT...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTACATGAAGGCATTCATTaGTCTTTTGCACTTATTAGG +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILHEGIH*SFALIR
Trigger: CCTAATAAGTGCAAAAGACCAATGAATGCCTTCATG...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATCATGAAGGCATTCATTaGTCTTTTGCACTTATTAGG +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNHEGIH*SFALIR
Trigger: CCTAATAAGTGCAAAAGACCAATGAATGCCTTCATG...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATCCTGTTATCTTTCCCTaGATACATCTGAGTATATTC +
Preference number: 4 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNPVIFP*IHLSIF
Trigger: GAATATACTCAGATGTATCCAGGGAAAGATAACAGG...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CCA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTATCTGTTATCTTTCCCTaGATACATCTGAGTATATTC +
Preference number: 4 (lower is better)
Translates to: IVAQSKSSCIANVFALILSVIFP*IHLSIF
Trigger: GAATATACTCAGATGTATCCAGGGAAAGATAACAGA...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS GCA 90 bp CGTACCCCCTCTCCGACCGACGTCGGCCTCCCCCGCGCGGGTTACTaGTCCCGCGGCAGCTCTTACTCCTCAACCGAAACTTTCCTACTT +
Preference number: 5 (lower is better)
Translates to: RTPSPTDVGLPRAGY*SRGSSYSSTETFLL
Trigger: AAGTAGGAAAGTTTCGGTTGAGGAGTAAGAGCTGCCGCGGGAGCAGTAACCCGCGCGGGGGAGGCCGACGTCGGTCGGAGAGGGGGTACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000222574.9
ENST00000638303.2
CDS GCA 90 bp ACTGGAATCGCCTGCCAAGCCTCCTCTTTGGGTCACACAGAGCGGTaGCTCCCGGTTCACGCCAAGTCCATCCCCCACCCTCTTTCGCCA +
Preference number: 5 (lower is better)
Translates to: TGIACQASSLGHTER*LPVHAKSIPHPLSP
Trigger: TGGCGAAAGAGGGTGGGGGATGGACTTGGCGTGAACCGGGAGGCACCGCTCTGTGTGACCCAAAGAGGAGGCTTGGCAGGCGATTCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000468116.1
ENST00000468401.1
ENST00000485846.5
ENST00000497535.5
ENST00000638758.1
ENST00000638870.1
ENST00000638893.1
ENST00000640580.1
CDS CCA 90 bp GTTTCAATCGGCCTGCGGTGGCAGCATAGGTTGAAAGGCGGAGACTaGAATCGCCTGCCAAGCCTCCTCTTTGGGTCACACAGAGCGGTG +
Preference number: 5 (lower is better)
Translates to: VSIGLRWQHRLKGGD*NRLPSLLFGSHRAV
Trigger: CACCGCTCTGTGTGACCCAAAGAGGAGGCTTGGCAGGCGATTCCAGTCTCCGCCTTTCAACCTATGCTGCCACCGCAGGCCGATTGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000468116.1
ENST00000468401.1
ENST00000485846.5
ENST00000497535.5
ENST00000638758.1
ENST00000638870.1
ENST00000638893.1
ENST00000640580.1
CDS-3UTR CAA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCACAGGCTACAGTGAGTaGCGCCGCTGTACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSTGYSE*RRCTAA
Trigger: GGCTGCAGTACAGCGGCGCAACTCACTGTAGCCTGT...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS CCA 90 bp GTGTCTTACTGGTGTTTCCTCCTTCCAATGGTGATGAGGGAAGGCTaGTTCACTCTTCGAAGAAGAGGACACTGGTGGAGGGCGTGCATA +
Preference number: 5 (lower is better)
Translates to: VSYWCFLLPMVMREG*FTLRRRGHWWRACI
Trigger: TATGCACGCCCTCCACCAGTGTCCTCTTCTTCGAAGAGTGAACCAGCCTTCCCTCATCACCATTGGAAGGAGGAAACACCAGTAAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS TCA 90 bp CCAGGTGAGCCACAGTTTTTACTGAATCCAGATCTTGCAAAGTCTTaGCCACCAGGTCCTCCACAAGACAAAGATGCACGACGCTGGCGA +
Preference number: 5 (lower is better)
Translates to: PGEPQFLLNPDLAKS*PPGPPQDKDARRWR
Trigger: TCGCCAGCGTCGTGCATCTTTGTCTTGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATCTGGATTCAGTAAAAACTGTGGCTCACCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000222574.9
ENST00000461963.1
ENST00000463202.5
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000607681.1
ENST00000638303.2
ENST00000638775.1
ENST00000638893.1
ENST00000640054.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS-3UTR CAA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGTGTTCTGGTAGCCTCTaGGCACTGACCAGACTAGGA +
Preference number: 5 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMCSGSL*ALTRLG
Trigger: TCCTAGTCTGGTCAGTGCCAAGAGGCTACCAGAACA...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS TCA 90 bp AGGCGAGAGCTCGCTGTCAGTGCTCCTTCTAAAAACGACTGTAGCTaGAAACTCCCTAAGAATGAACTCGAGTGTAGAGTGCACAGCGGA +
Preference number: 5 (lower is better)
Translates to: RRELAVSAPSKNDCS*KLPKNELECRVHSG
Trigger: TCCGCTGTGCACTCTACACTCGAGTTCATTCTTAGGGAGTTTTCAGCTACAGTCGTTTTTAGAAGGAGCACTGACAGCGAGCTCTCGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468116.1
ENST00000638870.1
CDS TCA 90 bp AGCTGCACTACACAGGTATCTCTCTTCAGAGCTATCCTCTGTGTATaGACAGTGCTGTTCTTGGGGTCCACAGAAGCACAGCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: SCTTQVSLFRAILCV*TVLFLGSTEAQLQS
Trigger: AGACTGCAGCTGTGCTTCTGTGGACCCCAAGAACAGCACTGTTCATACACAGAGGATAGCTCTGAAGAGAGATACCTGTGTAGTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478930.5
ENST00000485846.5
ENST00000638380.1
ENST00000638893.1
CDS-3UTR CAA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGAGATCTTGCAAAGTCTaGACCACCAGGTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMRSCKV*TTRSST
Trigger: TGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATCT...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCGCAGCTTGCTACAAATaGCCAGTTCCCCGTACAATC +
Preference number: 5 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSAACYK*PVPRTI
Trigger: GATTGTACGGGGAACTGGCAATTTGTAGCAAGCTGC...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS GCA 90 bp CTACACAGGTATCTCTCTTCAGAGCTATCCTCTGTGTATGAACAGTaGTGTTCTTGGGGTCCACAGAAGCACAGCTGCAGTCTGTCTTGT +
Preference number: 5 (lower is better)
Translates to: LHRYLSSELSSVYEQ*CSWGPQKHSCSLSC
Trigger: ACAAGACAGACTGCAGCTGTGCTTCTGTGGACCCCAAGAACAGCACTGTTCATACACAGAGGATAGCTCTGAAGAGAGATACCTGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478930.5
ENST00000485846.5
ENST00000638380.1
ENST00000638893.1
CDS-3UTR CAA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGTTGGGTAGGATCACTTaGAACTGCCTGAAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMLGRIT*NCLKFR
Trigger: CCTGAACTTCAGGCAGTTCAAAGTGATCCTACCCAA...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp TTGCGCCGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTGGGTAGGATCACTTaGAACTGCCTGAAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LRRCTAAWAMAQIIKGRSLGRIT*NCLKFR
Trigger: CCTGAACTTCAGGCAGTTCAAAGTGATCCTACCCAA...GGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCGGCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGCTGGTACATGCCAGATaGGGTAGGATCACTTTGAAC +
Preference number: 5 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMLVHAR*GRITLN
Trigger: GTTCAAAGTGATCCTACCCAATCTGGCATGTACCAG...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGGACTGGTCGCGATATTaGCCAATTCTGTTAGCCAGT +
Preference number: 5 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMDWSRY*PILLAS
Trigger: ACTGGCTAACAGAATTGGCAAATATCGCGACCAGTC...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTCTGCATCAGTGGACTTaGTGGACTGGTCGCGATATT +
Preference number: 5 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRLHQWT*WTGRDI
Trigger: AATATCGCGACCAGTCCACAAAGTCCACTGATGCAG...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAAACAGTGCCAGACAGTaGAAGGCCAGGAATTGCACC +
Preference number: 5 (lower is better)
Translates to: LRTALKFTVLTTLAACYKNSARQ*KARNCT
Trigger: GGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGTT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTAGATCTTGCAAAGTCTaGACCACCAGGTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRRSCKV*TTRSST
Trigger: TGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATCT...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGTTAACTAACTTTACCTaGGCCTGGGCTAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMLTNFT*AWARSP
Trigger: TGGAGACCTAGCCCAGGCCAAGGTAAAGTTAGTTAA...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTGCCAAGCCTCCTCTTaGGGTCACACAGAGCGGTGC +
Preference number: 5 (lower is better)
Translates to: SHELRTNGETLIFLSLSICQASS*GHTERC
Trigger: GCACCGCTCTGTGTGACCCAAAGAGGAGGCTTGGCA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CAA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTGACAACTCTGGCAGCTaGCTACAAATTGCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRDNSGS*LQIASS
Trigger: GGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTC...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS TCA 90 bp CCAAAACTCCTCGCTGTCAGTGCTCCTTCTAAAAACGACTGTAGCTaGAAACTCCCTAAGAATGAACTCGAGTGTAGAGTGCACAGCGGA +
Preference number: 5 (lower is better)
Translates to: PKLLAVSAPSKNDCS*KLPKNELECRVHSG
Trigger: TCCGCTGTGCACTCTACACTCGAGTTCATTCTTAGGGAGTTTTCAGCTACAGTCGTTTTTAGAAGGAGCACTGACAGCGAGGAGTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CAA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTGACTGGTCGCGATATTaGCCAATTCTGTTAGCCAGT +
Preference number: 5 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRDWSRY*PILLAS
Trigger: ACTGGCTAACAGAATTGGCAAATATCGCGACCAGTC...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGTTATGGTCACACGAATaGAGGACAAATGGTGAGACC +
Preference number: 5 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMLWSHE*RTNGET
Trigger: GGTCTCACCATTTGTCCTCAATTCGTGTGACCATAA...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAGCAGCTTGCTACAAATaGCCAGTTCCCCGTACAATC +
Preference number: 5 (lower is better)
Translates to: LRTALKFTVLTTLAACYKAACYK*PVPRTI
Trigger: GATTGTACGGGGAACTGGCAATTTGTAGCAAGCTGC...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAGACAACTCTGGCAGCTaGCTACAAATTGCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: LRTALKFTVLTTLAACYKDNSGS*LQIASS
Trigger: GGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTC...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTCTTAAGTTCACCGTTTaGACAACTCTGGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRLKFTV*TTLAAC
Trigger: GCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAG...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS TCA 90 bp TTAATGGCATCGGGGTGTCCAGGAGGTAGACATACATCGCCAATATaGACTTCACAACATGGAATGCCATGCTGTACCACAGTCAAGCTT +
Preference number: 5 (lower is better)
Translates to: LMASGCPGGRHTSPI*TSQHGMPCCTTVKL
Trigger: AAGCTTGACTGTGGTACAGCATGGCATTCCATGTTGTGAAGTTCATATTGGCGATGTATGTCTACCTCCTGGACACCCCGATGCCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000468410.5
ENST00000483809.1
ENST00000485846.5
ENST00000498408.1
ENST00000638303.2
ENST00000638677.1
ENST00000638893.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS TCA 90 bp AATTGGAAGAGAGCTGTGATGATCCAGGTGAGCCACAGTTTTTACTaGATCCAGATCTTGCAAAGTCTTGACCACCAGGTCCTCCACAAG +
Preference number: 5 (lower is better)
Translates to: NWKRAVMIQVSHSFY*IQILQSLDHQVLHK
Trigger: CTTGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATCTGGATTCAGTAAAAACTGTGGCTCACCTGGATCATCACAGCTCTCTTCCAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000222574.9
ENST00000461963.1
ENST00000463202.5
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000607681.1
ENST00000638303.2
ENST00000638775.1
ENST00000638893.1
ENST00000640054.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS TCA 90 bp TACACAAACCTCGCTGTCAGTGCTCCTTCTAAAAACGACTGTAGCTaGAAACTCCCTAAGAATGAACTCGAGTGTAGAGTGCACAGCGGA +
Preference number: 5 (lower is better)
Translates to: YTNLAVSAPSKNDCS*KLPKNELECRVHSG
Trigger: TCCGCTGTGCACTCTACACTCGAGTTCATTCTTAGGGAGTTTTCAGCTACAGTCGTTTTTAGAAGGAGCACTGACAGCGAGGTTTGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468401.1
ENST00000638758.1
CDS-3UTR CAA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTCTGGTACATGCCAGATaGGGTAGGATCACTTTGAAC +
Preference number: 5 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKILVHAR*GRITLN
Trigger: GTTCAAAGTGATCCTACCCAATCTGGCATGTACCAG...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGGTACCACAGTCAAGCTaGGATAAAATGATGACCAAC +
Preference number: 5 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMVPQSS*DKMMTN
Trigger: GTTGGTCATCATTTTATCCAAGCTTGACTGTGGTAC...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTAAGATCTTGCAAAGTCTaGACCACCAGGTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLRSCKV*TTRSST
Trigger: TGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATCT...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGCCTGAGCTGTGGTTTTaGACAGCTTTAGCATACAAA +
Preference number: 5 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMPELWF*TALAYK
Trigger: TTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGG...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGCTTCAGCCAAAGCCTTaGCTTCTAATGTGTACATTC +
Preference number: 5 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMLQPKP*LLMCTF
Trigger: GAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAG...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTGTTCTGGTAGCCTCTaGGCACTGACCAGACTAGGA +
Preference number: 5 (lower is better)
Translates to: WSHELRTNGETLIFLSLSCSGSL*ALTRLG
Trigger: TCCTAGTCTGGTCAGTGCCAAGAGGCTACCAGAACA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTTGGGCTAGGTCTCCATaGGAAATAATAACGGATGGC +
Preference number: 5 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIWARSP*EIITDG
Trigger: GCCATCCGTTATTATTTCCAATGGAGACCTAGCCCA...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACTGGGCTAGGTCTCCATaGGAAATAATAACGGATGGC +
Preference number: 5 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHWARSP*EIITDG
Trigger: GCCATCCGTTATTATTTCCAATGGAGACCTAGCCCA...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTTTAACTAACTTTACCTaGGCCTGGGCTAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKILTNFT*AWARSP
Trigger: TGGAGACCTAGCCCAGGCCAAGGTAAAGTTAGTTAA...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAACTTAAGTTCACCGTTTaGACAACTCTGGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: LRTALKFTVLTTLAACYKLKFTV*TTLAAC
Trigger: GCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAG...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS TCA 90 bp AAACTCCCTAAGAATGAACTCGAGTGTAGAGTGCACAGCGGAGAGTaGAACACCCTAGACAGCACGCAGCATTTAAAGCTACAAAAACCT +
Preference number: 5 (lower is better)
Translates to: KLPKNELECRVHSGE*NTLDSTQHLKLQKP
Trigger: AGGTTTTTGTAGCTTTAAATGCTGCGTGCTGTCTAGGGTGTTTCACTCTCCGCTGTGCACTCTACACTCGAGTTCATTCTTAGGGAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000468116.1
ENST00000468401.1
ENST00000485846.5
ENST00000497535.5
ENST00000638758.1
ENST00000638870.1
ENST00000638893.1
ENST00000640580.1
CDS-3UTR CAA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGGGTTCCAAGATGATCTaGGGTATTCTTGATGTGAAA +
Preference number: 5 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMGSKMI*GILDVK
Trigger: TTTCACATCAAGAATACCCAAGATCATCTTGGAACC...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCCTGCATCAGTGGACTTaGTGGACTGGTCGCGATATT +
Preference number: 5 (lower is better)
Translates to: WSHELRTNGETLIFLSLSLHQWT*WTGRDI
Trigger: AATATCGCGACCAGTCCACAAAGTCCACTGATGCAG...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAACAGTGCCAGACAGTaGAAGGCCAGGAATTGCACC +
Preference number: 5 (lower is better)
Translates to: SHELRTNGETLIFLSLSINSARQ*KARNCT
Trigger: GGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGTT...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGAACAGTGCCAGACAGTaGAAGGCCAGGAATTGCACC +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLNSARQ*KARNCT
Trigger: GGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGTT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGAACAGTGCCAGACAGTaGAAGGCCAGGAATTGCACC +
Preference number: 5 (lower is better)
Translates to: HELRTNGETLIFLSLSIKNSARQ*KARNCT
Trigger: GGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGTT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTGTTCTGGTAGCCTCTaGGCACTGACCAGACTAGGA +
Preference number: 5 (lower is better)
Translates to: SHELRTNGETLIFLSLSICSGSL*ALTRLG
Trigger: TCCTAGTCTGGTCAGTGCCAAGAGGCTACCAGAACA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS GCA 90 bp TCACAGGAGTTATATCCAGGTGAAGATGGCAAATTCTCATTACACTaGAGCAACTCCAATGAGTCATTCATTCCTGAGGCTCTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SQELYPGEDGKFSLH*SNSNESFIPEALLS
Trigger: GGACAAGAGAGCCTCAGGAATGAATGACTCATTGGAGTTGCTGCAGTGTAATGAGAATTTGCCATCTTCACCTGGATATAACTCCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000464009.1
ENST00000468410.5
ENST00000478930.5
ENST00000479011.1
ENST00000485846.5
ENST00000497535.5
ENST00000498408.1
ENST00000638303.2
ENST00000638380.1
ENST00000638549.1
ENST00000638893.1
ENST00000640057.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
ENST00000640580.1
CDS-3UTR CAA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTTGGGTAGGATCACTTaGAACTGCCTGAAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: WSHELRTNGETLIFLSLSLGRIT*NCLKFR
Trigger: CCTGAACTTCAGGCAGTTCAAAGTGATCCTACCCAA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp AAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTGCCAGTTCCCCGTGGTTCCAAGATGATCTaGGGTATTCTTGATGTGAAA +
Preference number: 5 (lower is better)
Translates to: KFTVLTTLAACYKLPVPRGSKMI*GILDVK
Trigger: TTTCACATCAAGAATACCCAAGATCATCTTGGAACC...ACGGGGAACTGGCAATTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCCTGCATCAGTGGACTTaGTGGACTGGTCGCGATATT +
Preference number: 5 (lower is better)
Translates to: SHELRTNGETLIFLSLSILHQWT*WTGRDI
Trigger: AATATCGCGACCAGTCCACAAAGTCCACTGATGCAG...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATACTGCATCAGTGGACTTaGTGGACTGGTCGCGATATT +
Preference number: 5 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKILHQWT*WTGRDI
Trigger: AATATCGCGACCAGTCCACAAAGTCCACTGATGCAG...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGCTGCATCAGTGGACTTaGTGGACTGGTCGCGATATT +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLLHQWT*WTGRDI
Trigger: AATATCGCGACCAGTCCACAAAGTCCACTGATGCAG...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTAACAGTGCCAGACAGTaGAAGGCCAGGAATTGCACC +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSNSARQ*KARNCT
Trigger: GGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGTT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTGTACCACAGTCAAGCTaGGATAAAATGATGACCAAC +
Preference number: 5 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIVPQSS*DKMMTN
Trigger: GTTGGTCATCATTTTATCCAAGCTTGACTGTGGTAC...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAGTACCACAGTCAAGCTaGGATAAAATGATGACCAAC +
Preference number: 5 (lower is better)
Translates to: LRTALKFTVLTTLAACYKVPQSS*DKMMTN
Trigger: GTTGGTCATCATTTTATCCAAGCTTGACTGTGGTAC...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAAGATCTTGCAAAGTCTaGACCACCAGGTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIRSCKV*TTRSST
Trigger: TGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATCT...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGAGATCTTGCAAAGTCTaGACCACCAGGTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLRSCKV*TTRSST
Trigger: TGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATCT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGAGATCTTGCAAAGTCTaGACCACCAGGTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: HELRTNGETLIFLSLSIKRSCKV*TTRSST
Trigger: TGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATCT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp GTGGTGGTTACTAGAGGAAAGGCCGACTCCCAGCTTCTGCTTCATTTCATCATGTTAGCATACAAAGAATaGGAAGAGAGCTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: VVVTRGKADSQLLLHFIMLAYKE*EESCDD
Trigger: ATCATCACAGCTCTCTTCCAATTCTTTGTATGCTAA...CATGATGAAATGAAGCAGAAGCTGGGAGTCGGCCTTTCCTCTAGTAACCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCCTGAGCTGTGGTTTTaGACAGCTTTAGCATACAAA +
Preference number: 5 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHPELWF*TALAYK
Trigger: TTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGG...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCTTCAGCCAAAGCCTTaGCTTCTAATGTGTACATTC +
Preference number: 5 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHLQPKP*LLMCTF
Trigger: GAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAG...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACTGTTGTGAGCCTGAATaGGTTCTTTTCCTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHCCEPE*VLFLFQ
Trigger: TTGGAAGAGGAAAAGAACCAATTCAGGCTCACAACA...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTTGTTCTGGTAGCCTCTaGGCACTGACCAGACTAGGA +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSCSGSL*ALTRLG
Trigger: TCCTAGTCTGGTCAGTGCCAAGAGGCTACCAGAACA...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGTTGGGTAGGATCACTTaGAACTGCCTGAAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLLGRIT*NCLKFR
Trigger: CCTGAACTTCAGGCAGTTCAAAGTGATCCTACCCAA...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCCTGGTACATGCCAGATaGGGTAGGATCACTTTGAAC +
Preference number: 5 (lower is better)
Translates to: SHELRTNGETLIFLSLSILVHAR*GRITLN
Trigger: GTTCAAAGTGATCCTACCCAATCTGGCATGTACCAG...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGCTGGTACATGCCAGATaGGGTAGGATCACTTTGAAC +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLLVHAR*GRITLN
Trigger: GTTCAAAGTGATCCTACCCAATCTGGCATGTACCAG...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACGGTTCCAAGATGATCTaGGGTATTCTTGATGTGAAA +
Preference number: 5 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHGSKMI*GILDVK
Trigger: TTTCACATCAAGAATACCCAAGATCATCTTGGAACC...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAGACTGGTCGCGATATTaGCCAATTCTGTTAGCCAGT +
Preference number: 5 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIDWSRY*PILLAS
Trigger: ACTGGCTAACAGAATTGGCAAATATCGCGACCAGTC...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGGACTGGTCGCGATATTaGCCAATTCTGTTAGCCAGT +
Preference number: 5 (lower is better)
Translates to: HELRTNGETLIFLSLSIKDWSRY*PILLAS
Trigger: ACTGGCTAACAGAATTGGCAAATATCGCGACCAGTC...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTGCATCAGTGGACTTaGTGGACTGGTCGCGATATT +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSLHQWT*WTGRDI
Trigger: AATATCGCGACCAGTCCACAAAGTCCACTGATGCAG...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTAGATCTTGCAAAGTCTaGACCACCAGGTCCTCCACA +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSRSCKV*TTRSST
Trigger: TGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATCT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTACCTGAGCTGTGGTTTTaGACAGCTTTAGCATACAAA +
Preference number: 5 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLPELWF*TALAYK
Trigger: TTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGG...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACGCATTCATTGGTCTTTaGCACTTATTAGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHAFIGL*HLLGEV
Trigger: CACTTCTCCTAATAAGTGCAAAAGACCAATGAATGC...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAGCATTCATTGGTCTTTaGCACTTATTAGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: LRTALKFTVLTTLAACYKAFIGL*HLLGEV
Trigger: CACTTCTCCTAATAAGTGCAAAAGACCAATGAATGC...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTTATGGTCACACGAATaGAGGACAAATGGTGAGACC +
Preference number: 5 (lower is better)
Translates to: WSHELRTNGETLIFLSLSLWSHE*RTNGET
Trigger: GGTCTCACCATTTGTCCTCAATTCGTGTGACCATAA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGTGGGCTAGGTCTCCATaGGAAATAATAACGGATGGC +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLWARSP*EIITDG
Trigger: GCCATCCGTTATTATTTCCAATGGAGACCTAGCCCA...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTTAACTAACTTTACCTaGGCCTGGGCTAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SHELRTNGETLIFLSLSILTNFT*AWARSP
Trigger: TGGAGACCTAGCCCAGGCCAAGGTAAAGTTAGTTAA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACATTAAAGTGCAAGTGTaGCACTGCAGTAAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHIKVQV*HCSKCK
Trigger: TTTGCACTTACTGCAGTGCAACACTTGCACTTTAAT...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS TCA 90 bp CATTGGTCTTTTGCACTTATTAGGAGAAGTGGCACTCACAGTCCCTaGGCTGTGGTTTTTGACAGCTTTAGCATACAAAGAATTGGAAGA +
Preference number: 5 (lower is better)
Translates to: HWSFALIRRSGTHSP*AVVFDSFSIQRIGR
Trigger: TCTTCCAATTCTTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCCACTTCTCCTAATAAGTGCAAAAGACCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000222574.9
ENST00000461963.1
ENST00000463202.5
ENST00000463790.1
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000607681.1
ENST00000638303.2
ENST00000638775.1
ENST00000638893.1
ENST00000640054.1
ENST00000640195.1
ENST00000640309.1
ENST00000640325.1
ENST00000640401.1
CDS CCA 90 bp ATGATCTATTGTAAAATGAGCACTGCATCAGTGGACTTTGTGGACTaGTCGCGATATTTGCCAATTCTGTTAGCCAGTCCACCTCATTTT +
Preference number: 5 (lower is better)
Translates to: MIYCKMSTASVDFVD*SRYLPILLASPPHF
Trigger: AAAATGAGGTGGACTGGCTAACAGAATTGGCAAATATCGCGACCAGTCCACAAAGTCCACTGATGCAGTGCTCATTTTACAATAGATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTTTGGGTAGGATCACTTaGAACTGCCTGAAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSLGRIT*NCLKFR
Trigger: CCTGAACTTCAGGCAGTTCAAAGTGATCCTACCCAA...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTAGGTTCCAAGATGATCTaGGGTATTCTTGATGTGAAA +
Preference number: 5 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLGSKMI*GILDVK
Trigger: TTTCACATCAAGAATACCCAAGATCATCTTGGAACC...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTGACTGGTCGCGATATTaGCCAATTCTGTTAGCCAGT +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSDWSRY*PILLAS
Trigger: ACTGGCTAACAGAATTGGCAAATATCGCGACCAGTC...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAAACAGTGCCAGACAGTaGAAGGCCAGGAATTGCACC +
Preference number: 5 (lower is better)
Translates to: IVAQSKSSCIANVFALILNSARQ*KARNCT
Trigger: GGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGTT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATAACAGTGCCAGACAGTaGAAGGCCAGGAATTGCACC +
Preference number: 5 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNNSARQ*KARNCT
Trigger: GGTGCAATTCCTGGCCTTCAACTGTCTGGCACTGTT...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTAAAATCTTCAACATCTaGCCATTCCTTATTGCTTCC +
Preference number: 5 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKIKIFNI*PFLIAS
Trigger: GGAAGCAATAAGGAATGGCAAGATGTTGAAGATTTT...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AGGAAAATTAAAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACAAAATCTTCAACATCTaGCCATTCCTTATTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RKIKVQVLHCSKCKVCPHKIFNI*PFLIAS
Trigger: GGAAGCAATAAGGAATGGCAAGATGTTGAAGATTTT...GTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTTTAATTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAAAAAATCTTCAACATCTaGCCATTCCTTATTGCTTCC +
Preference number: 5 (lower is better)
Translates to: LRTALKFTVLTTLAACYKKIFNI*PFLIAS
Trigger: GGAAGCAATAAGGAATGGCAAGATGTTGAAGATTTT...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp AAGTGCAAGTGTTGCACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTTTAGCATACAAAGAATaGGAAGAGAGCTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: KCKCCTAVSAKSAPTIKILAYKE*EESCDD
Trigger: ATCATCACAGCTCTCTTCCAATTCTTTGTATGCTAA...AATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTGCAACACTTGCACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CTGAGGACAGCTCTTAAGTTCACCGTTTTGACAACTCTGGCAGCTTGCTACAAATTAGCATACAAAGAATaGGAAGAGAGCTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: LRTALKFTVLTTLAACYKLAYKE*EESCDD
Trigger: ATCATCACAGCTCTCTTCCAATTCTTTGTATGCTAA...TTTGTAGCAAGCTGCCAGAGTTGTCAAAACGGTGAACTTAAGAGCTGTCCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCCCTGAGCTGTGGTTTTaGACAGCTTTAGCATACAAA +
Preference number: 5 (lower is better)
Translates to: WSHELRTNGETLIFLSLSPELWF*TALAYK
Trigger: TTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGG...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCCTTCAGCCAAAGCCTTaGCTTCTAATGTGTACATTC +
Preference number: 5 (lower is better)
Translates to: WSHELRTNGETLIFLSLSLQPKP*LLMCTF
Trigger: GAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAG...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTGTTGTGAGCCTGAATaGGTTCTTTTCCTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: WSHELRTNGETLIFLSLSCCEPE*VLFLFQ
Trigger: TTGGAAGAGGAAAAGAACCAATTCAGGCTCACAACA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCTTATGGTCACACGAATaGAGGACAAATGGTGAGACC +
Preference number: 5 (lower is better)
Translates to: SHELRTNGETLIFLSLSILWSHE*RTNGET
Trigger: GGTCTCACCATTTGTCCTCAATTCGTGTGACCATAA...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTTCGCCTGGTTTGTTTaGTTTTGTTTCAATCGGCCT +
Preference number: 5 (lower is better)
Translates to: WSHELRTNGETLIFLSLSFAWFV*FCFNRP
Trigger: AGGCCGATTGAAACAAAACAAAACAAACCAGGCGAA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CAA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATCTGCATCAGTGGACTTaGTGGACTGGTCGCGATATT +
Preference number: 5 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNLHQWT*WTGRDI
Trigger: AATATCGCGACCAGTCCACAAAGTCCACTGATGCAG...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp CGCTGTACTGCAGCCTGGGCTATGGCACAAATAATAAAAGGTAGATCCTTACTAAAAATCTTCAACATCTaGCCATTCCTTATTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RCTAAWAMAQIIKGRSLLKIFNI*PFLIAS
Trigger: GGAAGCAATAAGGAATGGCAAGATGTTGAAGATTTT...TAGTAAGGATCTACCTTTTATTATTTGTGCCATAGCCCAGGCTGCAGTACAGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGGTACCACAGTCAAGCTaGGATAAAATGATGACCAAC +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLVPQSS*DKMMTN
Trigger: GTTGGTCATCATTTTATCCAAGCTTGACTGTGGTAC...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGGTACCACAGTCAAGCTaGGATAAAATGATGACCAAC +
Preference number: 5 (lower is better)
Translates to: HELRTNGETLIFLSLSIKVPQSS*DKMMTN
Trigger: GTTGGTCATCATTTTATCCAAGCTTGACTGTGGTAC...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCGTACCACAGTCAAGCTaGGATAAAATGATGACCAAC +
Preference number: 5 (lower is better)
Translates to: SHELRTNGETLIFLSLSIVPQSS*DKMMTN
Trigger: GTTGGTCATCATTTTATCCAAGCTTGACTGTGGTAC...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGCCTGAGCTGTGGTTTTaGACAGCTTTAGCATACAAA +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLPELWF*TALAYK
Trigger: TTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGG...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGCCTGAGCTGTGGTTTTaGACAGCTTTAGCATACAAA +
Preference number: 5 (lower is better)
Translates to: HELRTNGETLIFLSLSIKPELWF*TALAYK
Trigger: TTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGG...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCGCATTCATTGGTCTTTaGCACTTATTAGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: WSHELRTNGETLIFLSLSAFIGL*HLLGEV
Trigger: CACTTCTCCTAATAAGTGCAAAAGACCAATGAATGC...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGCTTCAGCCAAAGCCTTaGCTTCTAATGTGTACATTC +
Preference number: 5 (lower is better)
Translates to: HELRTNGETLIFLSLSIKLQPKP*LLMCTF
Trigger: GAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAG...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATACTTCAGCCAAAGCCTTaGCTTCTAATGTGTACATTC +
Preference number: 5 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKILQPKP*LLMCTF
Trigger: GAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAG...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGTGTTGTGAGCCTGAATaGGTTCTTTTCCTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLCCEPE*VLFLFQ
Trigger: TTGGAAGAGGAAAAGAACCAATTCAGGCTCACAACA...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCACAAATGGTGAGACCTaGATCTTCTTAAGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: WSHELRTNGETLIFLSLSTNGET*IFLSLS
Trigger: GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTTTATGGTCACACGAATaGAGGACAAATGGTGAGACC +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSLWSHE*RTNGET
Trigger: GGTCTCACCATTTGTCCTCAATTCGTGTGACCATAA...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTACTGGTACATGCCAGATaGGGTAGGATCACTTTGAAC +
Preference number: 5 (lower is better)
Translates to: IVAQSKSSCIANVFALILLVHAR*GRITLN
Trigger: GTTCAAAGTGATCCTACCCAATCTGGCATGTACCAG...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATCTGGTACATGCCAGATaGGGTAGGATCACTTTGAAC +
Preference number: 5 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNLVHAR*GRITLN
Trigger: GTTCAAAGTGATCCTACCCAATCTGGCATGTACCAG...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCGGTTCCAAGATGATCTaGGGTATTCTTGATGTGAAA +
Preference number: 5 (lower is better)
Translates to: SHELRTNGETLIFLSLSIGSKMI*GILDVK
Trigger: TTTCACATCAAGAATACCCAAGATCATCTTGGAACC...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGGGTTCCAAGATGATCTaGGGTATTCTTGATGTGAAA +
Preference number: 5 (lower is better)
Translates to: HELRTNGETLIFLSLSIKGSKMI*GILDVK
Trigger: TTTCACATCAAGAATACCCAAGATCATCTTGGAACC...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAGGTTCCAAGATGATCTaGGGTATTCTTGATGTGAAA +
Preference number: 5 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIGSKMI*GILDVK
Trigger: TTTCACATCAAGAATACCCAAGATCATCTTGGAACC...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCAAAATCTTCAACATCTaGCCATTCCTTATTGCTTCC +
Preference number: 5 (lower is better)
Translates to: WSHELRTNGETLIFLSLSKIFNI*PFLIAS
Trigger: GGAAGCAATAAGGAATGGCAAGATGTTGAAGATTTT...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTGTACCACAGTCAAGCTaGGATAAAATGATGACCAAC +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSVPQSS*DKMMTN
Trigger: GTTGGTCATCATTTTATCCAAGCTTGACTGTGGTAC...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp TGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCTTAGCATACAAAGAATaGGAAGAGAGCTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: WSHELRTNGETLIFLSLSLAYKE*EESCDD
Trigger: ATCATCACAGCTCTCTTCCAATTCTTTGTATGCTAA...GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp AAACGTTTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCCCTGAGCTGTGGTTTTaGACAGCTTTAGCATACAAA +
Preference number: 5 (lower is better)
Translates to: KRFCSSAKAFASNVYILLPELWF*TALAYK
Trigger: TTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGG...GAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAACGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCCTGAGCTGTGGTTTTaGACAGCTTTAGCATACAAA +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSPELWF*TALAYK
Trigger: TTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGG...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp TTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCTCTTCACCTGAGCTGTGGTTTTaGACAGCTTTAGCATACAAA +
Preference number: 5 (lower is better)
Translates to: FCSSAKAFASNVYILLSSPELWF*TALAYK
Trigger: TTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGG...TGAAGAGAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR CAA 90 bp CGTTTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCTCTGCATTCATTGGTCTTTaGCACTTATTAGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: RFCSSAKAFASNVYILLSAFIGL*HLLGEV
Trigger: CACTTCTCCTAATAAGTGCAAAAGACCAATGAATGC...AGAGAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGGCATTCATTGGTCTTTaGCACTTATTAGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLAFIGL*HLLGEV
Trigger: CACTTCTCCTAATAAGTGCAAAAGACCAATGAATGC...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAGCATTCATTGGTCTTTaGCACTTATTAGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKIAFIGL*HLLGEV
Trigger: CACTTCTCCTAATAAGTGCAAAAGACCAATGAATGC...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp TTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCTCTTCACTTCAGCCAAAGCCTTaGCTTCTAATGTGTACATTC +
Preference number: 5 (lower is better)
Translates to: FCSSAKAFASNVYILLSSLQPKP*LLMCTF
Trigger: GAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAG...TGAAGAGAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR CAA 90 bp AAACGTTTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCCTTCAGCCAAAGCCTTaGCTTCTAATGTGTACATTC +
Preference number: 5 (lower is better)
Translates to: KRFCSSAKAFASNVYILLLQPKP*LLMCTF
Trigger: GAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAG...GAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAACGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR CAA 90 bp TTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCTCTTCATGTTGTGAGCCTGAATaGGTTCTTTTCCTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: FCSSAKAFASNVYILLSSCCEPE*VLFLFQ
Trigger: TTGGAAGAGGAAAAGAACCAATTCAGGCTCACAACA...TGAAGAGAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR CAA 90 bp TCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCACAAATGGTGAGACCTaGATCTTCTTAAGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: SHELRTNGETLIFLSLSITNGET*IFLSLS
Trigger: GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGT...GATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGACAAATGGTGAGACCTaGATCTTCTTAAGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLTNGET*IFLSLS
Trigger: GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGATTAAAGTGCAAGTGTaGCACTGCAGTAAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: HELRTNGETLIFLSLSIKIKVQV*HCSKCK
Trigger: TTTGCACTTACTGCAGTGCAACACTTGCACTTTAAT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTTTCGCCTGGTTTGTTTaGTTTTGTTTCAATCGGCCT +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSFAWFV*FCFNRP
Trigger: AGGCCGATTGAAACAAAACAAAACAAACCAGGCGAA...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485846.5
ENST00000638893.1
CDS-3UTR CAA 90 bp CACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTCTTTCCATCAAGAAAATCTTCAACATCTaGCCATTCCTTATTGCTTCC +
Preference number: 5 (lower is better)
Translates to: HELRTNGETLIFLSLSIKKIFNI*PFLIAS
Trigger: GGAAGCAATAAGGAATGGCAAGATGTTGAAGATTTT...CTTGATGGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGAAAATCTTCAACATCTaGCCATTCCTTATTGCTTCC +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLKIFNI*PFLIAS
Trigger: GGAAGCAATAAGGAATGGCAAGATGTTGAAGATTTT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATATTAGCATACAAAGAATaGGAAGAGAGCTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKILAYKE*EESCDD
Trigger: ATCATCACAGCTCTCTTCCAATTCTTTGTATGCTAA...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp GTTTCTGTTCTTCAGCCAAAGCCTTTGCTTCTAATGTGTACATTCTTCTCTCTTGCATTCATTGGTCTTTaGCACTTATTAGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: VSVLQPKPLLLMCTFFSLAFIGL*HLLGEV
Trigger: CACTTCTCCTAATAAGTGCAAAAGACCAATGAATGC...AAGAGAGAAGAATGTACACATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463790.1
ENST00000640309.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTACAAATGGTGAGACCTaGATCTTCTTAAGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSTNGET*IFLSLS
Trigger: GGAAAGACTTAAGAAGATCAAGGTCTCACCATTTGT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp AATGCTATCAGTATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGAATGGTGTTGACTGTTaGTTAATAGCACCATTACAG +
Preference number: 5 (lower is better)
Translates to: NAISILWSHELRTNGETLNGVDC*LIAPLQ
Trigger: CTGTAATGGTGCTATTAACAAACAGTCAACACCATT...CAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGATACTGATAGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CACTGCAGTAAGTGCAAAGTCTGCCCCCACCATAAAGATTATGATGACAAAATAAATGGTGTTGACTGTTaGTTAATAGCACCATTACAG +
Preference number: 5 (lower is better)
Translates to: HCSKCKVCPHHKDYDDKINGVDC*LIAPLQ
Trigger: CTGTAATGGTGCTATTAACAAACAGTCAACACCATT...TATTTTGTCATCATAATCTTTATGGTGGGGGCAGACTTTGCACTTACTGCAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATGTACCACAGTCAAGCTaGGATAAAATGATGACCAAC +
Preference number: 5 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNVPQSS*DKMMTN
Trigger: GTTGGTCATCATTTTATCCAAGCTTGACTGTGGTAC...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTTTAGCATACAAAGAATaGGAAGAGAGCTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSLAYKE*EESCDD
Trigger: ATCATCACAGCTCTCTTCCAATTCTTTGTATGCTAA...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000485846.5
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
CDS-3UTR CAA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATCCTGAGCTGTGGTTTTaGACAGCTTTAGCATACAAA +
Preference number: 5 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNPELWF*TALAYK
Trigger: TTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGG...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTATGTTGTGAGCCTGAATaGGTTCTTTTCCTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: IVAQSKSSCIANVFALILCCEPE*VLFLFQ
Trigger: TTGGAAGAGGAAAAGAACCAATTCAGGCTCACAACA...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp ATCTTATGGTCACACGAATTGAGGACAAATGGTGAGACCTTGATCTTCTTAAGTAATGGTGTTGACTGTTaGTTAATAGCACCATTACAG +
Preference number: 5 (lower is better)
Translates to: ILWSHELRTNGETLIFLSNGVDC*LIAPLQ
Trigger: CTGTAATGGTGCTATTAACAAACAGTCAACACCATT...ACTTAAGAAGATCAAGGTCTCACCATTTGTCCTCAATTCGTGTGACCATAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS GCA 90 bp ATAAGAAACAAGTCTATCCAAGATAGCTTATCATATAGACTTGTTTaGCACCATTCCTGGGCCTATTTCTTCTCCTCCTTGAAATTTTTC +
Preference number: 5 (lower is better)
Translates to: IRNKSIQDSLSYRLV*HHSWAYFFSSLKFF
Trigger: GAAAAATTTCAAGGAGGAGAAGAAATAGGCCCAGGAATGGTGGCAAACAAGTCTATATGATAAGCTATCTTGGATAGACTTGTTTCTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463202.5
ENST00000640401.1
CDS-3UTR CAA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAGGTTCCAAGATGATCTaGGGTATTCTTGATGTGAAA +
Preference number: 5 (lower is better)
Translates to: IVAQSKSSCIANVFALILGSKMI*GILDVK
Trigger: TTTCACATCAAGAATACCCAAGATCATCTTGGAACC...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAGCATTCATTGGTCTTTaGCACTTATTAGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: IVAQSKSSCIANVFALILAFIGL*HLLGEV
Trigger: CACTTCTCCTAATAAGTGCAAAAGACCAATGAATGC...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAATTAAAGTGCAAGTGTaGCACTGCAGTAAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: IVAQSKSSCIANVFALILIKVQV*HCSKCK
Trigger: TTTGCACTTACTGCAGTGCAACACTTGCACTTTAAT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS-3UTR CAA 90 bp CAATCCATAGTTGACTCAGGTGAAAAGCTGTTCCATAAAGATAGAACTGTTAATTTAGCATACAAAGAATaGGAAGAGAGCTGTGATGAT +
Preference number: 5 (lower is better)
Translates to: QSIVDSGEKLFHKDRTVNLAYKE*EESCDD
Trigger: ATCATCACAGCTCTCTTCCAATTCTTTGTATGCTAA...ATTAACAGTTCTATCTTTATGGAACAGCTTTTCACCTGAGTCAACTATGGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498408.1
ENST00000640325.1
CDS-3UTR CAA 90 bp ATTGTAGCTCAGAGCAAAAGCAGCTGTATTGCCAATGTATTTGCTCTAATTTTAAATGGTGTTGACTGTTaGTTAATAGCACCATTACAG +
Preference number: 5 (lower is better)
Translates to: IVAQSKSSCIANVFALILNGVDC*LIAPLQ
Trigger: CTGTAATGGTGCTATTAACAAACAGTCAACACCATT...TAAAATTAGAGCAAATACATTGGCAATACAGCTGCTTTTGCTCTGAGCTACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222574.9
ENST00000468410.5
ENST00000638303.2
ENST00000640195.1
CDS GCA 72 bp TCTCCGACCGACGTCGGCCTCCCCCGCGCGGGTTACTaGTCCCGCGGCAGCTCTTACTCCTCAACCGAAACT +
Preference number: 6 (lower is better)
Translates to: SPTDVGLPRAGY*SRGSSYSSTET
Trigger: AGTTTCGGTTGAGGAGTAAGAGCTGCCGCGGGAGCAGTAACCCGCGCGGGGGAGGCCGACGTCGGTCGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222574.9
ENST00000638303.2
CDS GCA 72 bp GCCTGCCAAGCCTCCTCTTTGGGTCACACAGAGCGGTaGCTCCCGGTTCACGCCAAGTCCATCCCCCACCCT +
Preference number: 6 (lower is better)
Translates to: ACQASSLGHTER*LPVHAKSIPHP
Trigger: AGGGTGGGGGATGGACTTGGCGTGAACCGGGAGGCACCGCTCTGTGTGACCCAAAGAGGAGGCTTGGCAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000468116.1
ENST00000468401.1
ENST00000485846.5
ENST00000497535.5
ENST00000638758.1
ENST00000638870.1
ENST00000638893.1
ENST00000640580.1
CDS CCA 72 bp AGGCGGAGACTGGAATCGCCTGCCAAGCCTCCTCTTTaGGTCACACAGAGCGGTGCCTCCCGGTTCACGCCA +
Preference number: 6 (lower is better)
Translates to: RRRLESPAKPPL*VTQSGASRFTP
Trigger: TGGCGTGAACCGGGAGGCACCGCTCTGTGTGACCCAAAGAGGAGGCTTGGCAGGCGATTCCAGTCTCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000468116.1
ENST00000468401.1
ENST00000485846.5
ENST00000497535.5
ENST00000638758.1
ENST00000638870.1
ENST00000638893.1
ENST00000640580.1
CDS CAA 72 bp AAGGCGGAGACTGGAATCGCCTGCCAAGCCTCCTCTTaGGGTCACACAGAGCGGTGCCTCCCGGTTCACGCC +
Preference number: 6 (lower is better)
Translates to: KAETGIACQASS*GHTERCLPVHA
Trigger: GGCGTGAACCGGGAGGCACCGCTCTGTGTGACCCAAAGAGGAGGCTTGGCAGGCGATTCCAGTCTCCGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000468116.1
ENST00000468401.1
ENST00000485846.5
ENST00000497535.5
ENST00000638758.1
ENST00000638870.1
ENST00000638893.1
ENST00000640580.1
CDS CCA 72 bp GGCCTGCGGTGGCAGCATAGGTTGAAAGGCGGAGACTaGAATCGCCTGCCAAGCCTCCTCTTTGGGTCACAC +
Preference number: 6 (lower is better)
Translates to: GLRWQHRLKGGD*NRLPSLLFGSH
Trigger: GTGTGACCCAAAGAGGAGGCTTGGCAGGCGATTCCAGTCTCCGCCTTTCAACCTATGCTGCCACCGCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000468116.1
ENST00000468401.1
ENST00000485846.5
ENST00000497535.5
ENST00000638758.1
ENST00000638870.1
ENST00000638893.1
ENST00000640580.1
CDS TCA 72 bp GTTTTGTTTCAATCGGCCTGCGGTGGCAGCATAGGTTaGAAGGCGGAGACTGGAATCGCCTGCCAAGCCTCC +
Preference number: 6 (lower is better)
Translates to: VLFQSACGGSIG*KAETGIACQAS
Trigger: GGAGGCTTGGCAGGCGATTCCAGTCTCCGCCTTTCAACCTATGCTGCCACCGCAGGCCGATTGAAACAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000468116.1
ENST00000468401.1
ENST00000485846.5
ENST00000497535.5
ENST00000638758.1
ENST00000638870.1
ENST00000638893.1
ENST00000640580.1
CDS CCA 72 bp TGGTGTTTCCTCCTTCCAATGGTGATGAGGGAAGGCTaGTTCACTCTTCGAAGAAGAGGACACTGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: WCFLLPMVMREG*FTLRRRGHWWR
Trigger: CCTCCACCAGTGTCCTCTTCTTCGAAGAGTGAACCAGCCTTCCCTCATCACCATTGGAAGGAGGAAACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS TCA 72 bp TCGGGGTGTCCAGGAGGTAGACATACATCGCCAATATaGACTTCACAACATGGAATGCCATGCTGTACCACA +
Preference number: 6 (lower is better)
Translates to: SGCPGGRHTSPI*TSQHGMPCCTT
Trigger: TGTGGTACAGCATGGCATTCCATGTTGTGAAGTTCATATTGGCGATGTATGTCTACCTCCTGGACACCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000468410.5
ENST00000483809.1
ENST00000485846.5
ENST00000498408.1
ENST00000638303.2
ENST00000638677.1
ENST00000638893.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS TCA 72 bp ACACAGGTATCTCTCTTCAGAGCTATCCTCTGTGTATaGACAGTGCTGTTCTTGGGGTCCACAGAAGCACAG +
Preference number: 6 (lower is better)
Translates to: TQVSLFRAILCV*TVLFLGSTEAQ
Trigger: CTGTGCTTCTGTGGACCCCAAGAACAGCACTGTTCATACACAGAGGATAGCTCTGAAGAGAGATACCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478930.5
ENST00000485846.5
ENST00000638380.1
ENST00000638893.1
CDS GCA 72 bp CTGGTACATGCCAGATTGGGTAGGATCACTTTGAACTaGCTGAAGTTCAGGAAGGTCATCAAGCTCCATGTG +
Preference number: 6 (lower is better)
Translates to: LVHARLGRITLN*LKFRKVIKLHV
Trigger: CACATGGAGCTTGATGACCTTCCTGAACTTCAGGCAGTTCAAAGTGATCCTACCCAATCTGGCATGTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000464009.1
ENST00000468410.5
ENST00000479011.1
ENST00000485846.5
ENST00000497535.5
ENST00000498408.1
ENST00000638303.2
ENST00000638549.1
ENST00000638893.1
ENST00000640057.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
ENST00000640580.1
CDS GCA 72 bp TATCTCTCTTCAGAGCTATCCTCTGTGTATGAACAGTaGTGTTCTTGGGGTCCACAGAAGCACAGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: YLSSELSSVYEQ*CSWGPQKHSCS
Trigger: ACTGCAGCTGTGCTTCTGTGGACCCCAAGAACAGCACTGTTCATACACAGAGGATAGCTCTGAAGAGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478930.5
ENST00000485846.5
ENST00000638380.1
ENST00000638893.1
CDS CAA 72 bp ACTCAGCTGGTACATGCCAGATTGGGTAGGATCACTTaGAACTGCCTGAAGTTCAGGAAGGTCATCAAGCTC +
Preference number: 6 (lower is better)
Translates to: TQLVHARLGRIT*NCLKFRKVIKL
Trigger: GAGCTTGATGACCTTCCTGAACTTCAGGCAGTTCAAAGTGATCCTACCCAATCTGGCATGTACCAGCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000464009.1
ENST00000468410.5
ENST00000479011.1
ENST00000485846.5
ENST00000497535.5
ENST00000498408.1
ENST00000638303.2
ENST00000638549.1
ENST00000638893.1
ENST00000640057.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
ENST00000640580.1
CDS TCA 72 bp AGAGCTGTGATGATCCAGGTGAGCCACAGTTTTTACTaGATCCAGATCTTGCAAAGTCTTGACCACCAGGTC +
Preference number: 6 (lower is better)
Translates to: RAVMIQVSHSFY*IQILQSLDHQV
Trigger: GACCTGGTGGTCAAGACTTTGCAAGATCTGGATTCAGTAAAAACTGTGGCTCACCTGGATCATCACAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000222574.9
ENST00000461963.1
ENST00000463202.5
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000607681.1
ENST00000638303.2
ENST00000638775.1
ENST00000638893.1
ENST00000640054.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS TCA 72 bp AAGAATGAACTCGAGTGTAGAGTGCACAGCGGAGAGTaGAACACCCTAGACAGCACGCAGCATTTAAAGCTA +
Preference number: 6 (lower is better)
Translates to: KNELECRVHSGE*NTLDSTQHLKL
Trigger: TAGCTTTAAATGCTGCGTGCTGTCTAGGGTGTTTCACTCTCCGCTGTGCACTCTACACTCGAGTTCATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000468116.1
ENST00000468401.1
ENST00000485846.5
ENST00000497535.5
ENST00000638758.1
ENST00000638870.1
ENST00000638893.1
ENST00000640580.1
CDS TCA 72 bp AATCTAGAAATTCTGTGCCAATGGCACAAGTCCCCATaGATGACAGCTAACATACCCCAACACCTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: NLEILCQWHKSP*MTANIPQHLQP
Trigger: AGGCTGGAGGTGTTGGGGTATGTTAGCTGTCATTCATGGGGACTTGTGCCATTGGCACAGAATTTCTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463202.5
ENST00000640401.1
CDS GCA 72 bp GGCTCTCTTGTCCATCACCAACAGGAGTTTCTGTACTaGATTAGGCATCTGATTTGTCTTCACTTCCCACAC +
Preference number: 6 (lower is better)
Translates to: GSLVHHQQEFLY*IRHLICLHFPH
Trigger: GTGTGGGAAGTGAAGACAAATCAGATGCCTAATGCAGTACAGAAACTCCTGTTGGTGATGGACAAGAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000464009.1
ENST00000468401.1
ENST00000468410.5
ENST00000478930.5
ENST00000479011.1
ENST00000485846.5
ENST00000497535.5
ENST00000638303.2
ENST00000638380.1
ENST00000638549.1
ENST00000638758.1
ENST00000638893.1
ENST00000640057.1
ENST00000640195.1
ENST00000640401.1
ENST00000640580.1
CDS CAA 72 bp ACTGCATCAGTGGACTTTGTGGACTGGTCGCGATATTaGCCAATTCTGTTAGCCAGTCCACCTCATTTTCAC +
Preference number: 6 (lower is better)
Translates to: TASVDFVDWSRY*PILLASPPHFH
Trigger: GTGAAAATGAGGTGGACTGGCTAACAGAATTGGCAAATATCGCGACCAGTCCACAAAGTCCACTGATGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000638303.2
ENST00000638893.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS CAA 72 bp GCCACAGTTTTTACTGAATCCAGATCTTGCAAAGTCTaGACCACCAGGTCCTCCACAAGACAAAGATGCACG +
Preference number: 6 (lower is better)
Translates to: ATVFTESRSCKV*TTRSSTRQRCT
Trigger: CGTGCATCTTTGTCTTGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATCTGGATTCAGTAAAAACTGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000222574.9
ENST00000461963.1
ENST00000463202.5
ENST00000468410.5
ENST00000483809.1
ENST00000485846.5
ENST00000498408.1
ENST00000607681.1
ENST00000638303.2
ENST00000638677.1
ENST00000638775.1
ENST00000638893.1
ENST00000640054.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS CAA 72 bp GGAGAAGTGGCACTCACAGTCCCTGAGCTGTGGTTTTaGACAGCTTTAGCATACAAAGAATTGGAAGAGAGC +
Preference number: 6 (lower is better)
Translates to: GEVALTVPELWF*TALAYKELEES
Trigger: GCTCTCTTCCAATTCTTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCCACTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000222574.9
ENST00000461963.1
ENST00000463202.5
ENST00000463790.1
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000607681.1
ENST00000638303.2
ENST00000638775.1
ENST00000638893.1
ENST00000640054.1
ENST00000640195.1
ENST00000640309.1
ENST00000640325.1
ENST00000640401.1
CDS TCA 72 bp CTCGCTGTCAGTGCTCCTTCTAAAAACGACTGTAGCTaGAAACTCCCTAAGAATGAACTCGAGTGTAGAGTG +
Preference number: 6 (lower is better)
Translates to: LAVSAPSKNDCS*KLPKNELECRV
Trigger: CACTCTACACTCGAGTTCATTCTTAGGGAGTTTTCAGCTACAGTCGTTTTTAGAAGGAGCACTGACAGCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000468116.1
ENST00000468401.1
ENST00000485846.5
ENST00000497535.5
ENST00000638758.1
ENST00000638870.1
ENST00000638893.1
ENST00000640580.1
CDS CAA 90 bp ACAGTCCCTGAGCTGTGGTTTTTGACAGCTTTAGCATACAAAGAATaGGAAGAGAGCTGTGATGATCCAGGTGAGCCACAGTTTTTACTG +
Preference number: 6 (lower is better)
Translates to: TVPELWFLTALAYKE*EESCDDPGEPQFLL
Trigger: CAGTAAAAACTGTGGCTCACCTGGATCATCACAGCTCTCTTCCAATTCTTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 14 transcripts:
ENST00000222574.9
ENST00000461963.1
ENST00000463202.5
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000607681.1
ENST00000638303.2
ENST00000638775.1
ENST00000638893.1
ENST00000640054.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS CAA 90 bp TTCCTCATTATCACAGCCTTCAGCTCTAGCAAAATCTTCAACATCTaGCCATTCCTTATTGCTTCCCTTATGAAAGCACAGTCGTGTGCC +
Preference number: 6 (lower is better)
Translates to: FLIITAFSSSKIFNI*PFLIASLMKAQSCA
Trigger: GGCACACGACTGTGCTTTCATAAGGGAAGCAATAAGGAATGGCAAGATGTTGAAGATTTTGCTAGAGCTGAAGGCTGTGATAATGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000222574.9
ENST00000461963.1
ENST00000463202.5
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000638303.2
ENST00000638893.1
ENST00000640054.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS TCA 72 bp AAGCTCCATGTGTTCATCACAGGAGTTATATCCAGGTaGAGATGGCAAATTCTCATTACACTGCAGCAACTC +
Preference number: 6 (lower is better)
Translates to: KLHVFITGVISR*RWQILITLQQL
Trigger: GAGTTGCTGCAGTGTAATGAGAATTTGCCATCTTCACCTGGATATAACTCCTGTGATGAACACATGGAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000464009.1
ENST00000468410.5
ENST00000478930.5
ENST00000479011.1
ENST00000485846.5
ENST00000497535.5
ENST00000498408.1
ENST00000638303.2
ENST00000638380.1
ENST00000638549.1
ENST00000638893.1
ENST00000640057.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
ENST00000640580.1
CDS TCA 72 bp TTTGCACTTATTAGGAGAAGTGGCACTCACAGTCCCTaGGCTGTGGTTTTTGACAGCTTTAGCATACAAAGA +
Preference number: 6 (lower is better)
Translates to: FALIRRSGTHSP*AVVFDSFSIQR
Trigger: TCTTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCCACTTCTCCTAATAAGTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000222574.9
ENST00000461963.1
ENST00000463202.5
ENST00000463790.1
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000607681.1
ENST00000638303.2
ENST00000638775.1
ENST00000638893.1
ENST00000640054.1
ENST00000640195.1
ENST00000640309.1
ENST00000640325.1
ENST00000640401.1
CDS GCA 72 bp TTATATCCAGGTGAAGATGGCAAATTCTCATTACACTaGAGCAACTCCAATGAGTCATTCATTCCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: LYPGEDGKFSLH*SNSNESFIPEA
Trigger: AGCCTCAGGAATGAATGACTCATTGGAGTTGCTGCAGTGTAATGAGAATTTGCCATCTTCACCTGGATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000464009.1
ENST00000468410.5
ENST00000478930.5
ENST00000479011.1
ENST00000485846.5
ENST00000497535.5
ENST00000498408.1
ENST00000638303.2
ENST00000638380.1
ENST00000638549.1
ENST00000638893.1
ENST00000640057.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
ENST00000640580.1
CDS GCA 72 bp AAGTCTATCCAAGATAGCTTATCATATAGACTTGTTTaGCACCATTCCTGGGCCTATTTCTTCTCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: KSIQDSLSYRLV*HHSWAYFFSSL
Trigger: CAAGGAGGAGAAGAAATAGGCCCAGGAATGGTGGCAAACAAGTCTATATGATAAGCTATCTTGGATAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463202.5
ENST00000640401.1
CDS CCA 72 bp TTATTAGGAGAAGTGGCACTCACAGTCCCTGAGCTGTaGTTTTTGACAGCTTTAGCATACAAAGAATTGGAA +
Preference number: 6 (lower is better)
Translates to: LLGEVALTVPEL*FLTALAYKELE
Trigger: TTCCAATTCTTTGTATGCTAAAGCTGTCAAAAACCACAGCTCAGGGACTGTGAGTGCCACTTCTCCTAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000222574.9
ENST00000461963.1
ENST00000463202.5
ENST00000463790.1
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000607681.1
ENST00000638303.2
ENST00000638775.1
ENST00000638893.1
ENST00000640054.1
ENST00000640195.1
ENST00000640309.1
ENST00000640325.1
ENST00000640401.1
CDS CAA 72 bp ATCACAGCCTTCAGCTCTAGCAAAATCTTCAACATCTaGCCATTCCTTATTGCTTCCCTTATGAAAGCACAG +
Preference number: 6 (lower is better)
Translates to: ITAFSSSKIFNI*PFLIASLMKAQ
Trigger: CTGTGCTTTCATAAGGGAAGCAATAAGGAATGGCAAGATGTTGAAGATTTTGCTAGAGCTGAAGGCTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000222574.9
ENST00000461963.1
ENST00000463202.5
ENST00000468410.5
ENST00000485846.5
ENST00000498408.1
ENST00000638303.2
ENST00000638893.1
ENST00000640054.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
CDS CAA 72 bp CTGGTATGTCTGAGGTATTTTGGTTCCAAGATGATCTaGGGTATTCTTGATGTGAAACATCTGAACTCAGCT +
Preference number: 6 (lower is better)
Translates to: LVCLRYFGSKMI*GILDVKHLNSA
Trigger: AGCTGAGTTCAGATGTTTCACATCAAGAATACCCAAGATCATCTTGGAACCAAAATACCTCAGACATACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000222574.9
ENST00000463202.5
ENST00000464009.1
ENST00000468410.5
ENST00000479011.1
ENST00000485846.5
ENST00000497535.5
ENST00000498408.1
ENST00000638303.2
ENST00000638549.1
ENST00000638893.1
ENST00000640057.1
ENST00000640195.1
ENST00000640325.1
ENST00000640401.1
ENST00000640580.1
CDS CAA 72 bp CACAACATGGAATGCCATGCTGTACCACAGTCAAGCTaGGATAAAATGATGACCAACCTAAAGTTAAACAAT +
Preference number: 6 (lower is better)
Translates to: HNMECHAVPQSS*DKMMTNLKLNN
Trigger: ATTGTTTAACTTTAGGTTGGTCATCATTTTATCCAAGCTTGACTGTGGTACAGCATGGCATTCCATGTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483809.1
ENST00000638677.1