RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HAUS3 (Homo sapiens)

Ensembl gene IDs: ENSG00000214367

Ensembl transcript IDs: ENST00000243706.8, ENST00000443786.3, ENST00000502440.1, ENST00000506763.5, ENST00000514395.1, ENST00000672725.1, ENST00000672739.1

Found 422 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGCCTCATCTGCACCCCACGCTGGTGGATGGCTGGTTGTTGTCTaGATGCCTGCTGTGAGTAGCCCCCAGGGCCTTCCATGGGCTGAG +
Preference number: 1 (lower is better)
Translates to: EASSAPHAGGWLVVV*MPAVSSPQGLPWAE
Trigger: CTCAGCCCATGGAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGACAACAACCAGCCATCCACCAGCGTGGGGTGCAGATGAGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR CCA 90 bp TCATGGCCAGCTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTaGTACTGTCTTGAGGTCCCATGGCACACGGTTCATGGTGCACTC +
Preference number: 1 (lower is better)
Translates to: SWPACRGQQRSLWGA*YCLEVPWHTVHGAL
Trigger: GAGTGCACCATGAACCGTGTGCCATGGGACCTCAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAGCTGGCCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR GCA 90 bp AGCGGAGCCTTGCACCACGAAGTTCACTGCCTGTCGCTCTGCTTGTaGCCGGAGTTGCTGGTCATGAGCGTGAATCCTTGGCAGGGGTCT +
Preference number: 1 (lower is better)
Translates to: SGALHHEVHCLSLCL*PELLVMSVNPWQGS
Trigger: AGACCCCTGCCAAGGATTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAAGGCTCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR GCA 90 bp GTCAGCAGCGGAGCCTTGCACCACGAAGTTCACTGCCTGTCGCTCTaGTTGTGCCCGGAGTTGCTGGTCATGAGCGTGAATCCTTGGCAG +
Preference number: 1 (lower is better)
Translates to: VSSGALHHEVHCLSL*LCPELLVMSVNPWQ
Trigger: CTGCCAAGGATTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAAGGCTCCGCTGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR TCA 90 bp TTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTTaGGGTCCCATGGCACACGGTTCATGGTGCACTCAGCATTCTGCA +
Preference number: 1 (lower is better)
Translates to: LQRSAAEPMGRVVLS*GPMAHGSWCTQHSA
Trigger: TGCAGAATGCTGAGTGCACCATGAACCGTGTGCCATGGGACCTCAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CCA 90 bp GCCGCTCCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTaGTTTGCTCTCTGTCTGCGTGTGTCACCTGTTCCACGGGCACAT +
Preference number: 1 (lower is better)
Translates to: AAPSLLHRPPRTPPS*FALCLRVSPVPRAH
Trigger: ATGTGCCCGTGGAACAGGTGACACACGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGGAGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
3UTR GCA 90 bp GTCTTGAGGTCCCATGGCACACGGTTCATGGTGCACTCAGCATTCTaGACCATCGCCACAGCTCTCACGGTACCTCCACACAGAGGTGCT +
Preference number: 1 (lower is better)
Translates to: VLRSHGTRFMVHSAF*TIATALTVPPHRGA
Trigger: AGCACCTCTGTGTGGAGGTACCGTGAGAGCTGTGGCGATGGTGCAGAATGCTGAGTGCACCATGAACCGTGTGCCATGGGACCTCAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CCA 90 bp TTACGGCAGACACACAACTACCATCCGTGCCTTGATCTGCCCTGCTaGCCCCCTGGGCTGAGCAAGTCAAGGTTTGGGTGGGGACAGTAT +
Preference number: 1 (lower is better)
Translates to: LRQTHNYHPCLDLPC*PPGLSKSRFGWGQY
Trigger: ATACTGTCCCCACCCAAACCTTGACTTGCTCAGCCCAGGGGGCCAGCAGGGCAGATCAAGGCACGGATGGTAGTTGTGTGTCTGCCGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR CCA 90 bp AAGCCCTCCAGAACAGGACCACAGGCCGGGGCATCTGGACAGCCATaGCCACCCTCTGCTTGGCGTTTTACTAACACCACAATTCCTCTA +
Preference number: 1 (lower is better)
Translates to: KPSRTGPQAGASGQP*PPSAWRFTNTTIPL
Trigger: TAGAGGAATTGTGGTGTTAGTAAAACGCCAAGCAGAGGGTGGCCATGGCTGTCCAGATGCCCCGGCCTGTGGTCCTGTTCTGGAGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR TCA 90 bp ACAACTACCATCCGTGCCTTGATCTGCCCTGCTGGCCCCCTGGGCTaGGCAAGTCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCT +
Preference number: 1 (lower is better)
Translates to: TTTIRALICPAGPLG*ASQGLGGDSINQAS
Trigger: AGATGCTTGATTTATACTGTCCCCACCCAAACCTTGACTTGCTCAGCCCAGGGGGCCAGCAGGGCAGATCAAGGCACGGATGGTAGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR TCA 90 bp CCAGATAGCAGAGTGCTCTATTTGAATGTAGATGCATGGATCATCTaGCACAAAGCCCTCCAGAACAGGACCACAGGCCGGGGCATCTGG +
Preference number: 1 (lower is better)
Translates to: PDSRVLYLNVDAWII*HKALQNRTTGRGIW
Trigger: CCAGATGCCCCGGCCTGTGGTCCTGTTCTGGAGGGCTTTGTGTCAGATGATCCATGCATCTACATTCAAATAGAGCACTCTGCTATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CCA 90 bp CTGGGAGAAGCTATAATTTACCTGCAGAAACTGGCCGTCAAGGTGTaGGAAGCAGCCACTGCAGTGAAGACATGGATCATGGCCAGCTTG +
Preference number: 1 (lower is better)
Translates to: LGEAIIYLQKLAVKV*EAATAVKTWIMASL
Trigger: CAAGCTGGCCATGATCCATGTCTTCACTGCAGTGGCTGCTTCCCACACCTTGACGGCCAGTTTCTGCAGGTAAATTATAGCTTCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR TCA 90 bp GTAGACGGGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTaGCTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGATCTCTCGA +
Preference number: 1 (lower is better)
Translates to: VDGYFCNPVLGRLFL*LSRCSFNLPKRISR
Trigger: TCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACCCGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
3UTR GCA 90 bp CTGGGTGGAACCATCAGTATACATCACAGTTATCACCAGGGCTGCTaGCTGTTTGAGCATTTCAATCAGCTGGCTTTTTGCCCAATCATC +
Preference number: 1 (lower is better)
Translates to: LGGTISIHHSYHQGC*LFEHFNQLAFCPII
Trigger: GATGATTGGGCAAAAAGCCAGCTGATTGAAATGCTCAAACAGGCAGCAGCCCTGGTGATAACTGTGATGTATACTGATGGTTCCACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR GCA 90 bp GATCTCTCGAAGCTGGTTATTGCTCGTTATAAGAAACCGTTCTCCTaGAACAAAATGAGCTTCTTGCTCCAATTCCTTGAGACGAGCCCC +
Preference number: 1 (lower is better)
Translates to: DLSKLVIARYKKPFS*NKMSFLLQFLETSP
Trigger: GGGGCTCGTCTCAAGGAATTGGAGCAAGAAGCTCATTTTGTTGCAGGAGAACGGTTTCTTATAACGAGCAATAACCAGCTTCGAGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR GCA 90 bp ACCATTTGGCTTTCAGTTCCTGCCAAGACGGAAACTAGCACAAGCTaGTCATATCCTGGGAGAAGCTATAATTTACCTGCAGAAACTGGC +
Preference number: 1 (lower is better)
Translates to: TIWLSVPAKTETSTS*SYPGRSYNLPAETG
Trigger: GCCAGTTTCTGCAGGTAAATTATAGCTTCTCCCAGGATATGAGCAGCTTGTGCTAGTTTCCGTCTTGGCAGGAACTGAAAGCCAAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR TCA 90 bp AACCATCAGTATACATCACAGTTATCACCAGGGCTGCTGCCTGTTTaGGCATTTCAATCAGCTGGCTTTTTGCCCAATCATCCAAATGCC +
Preference number: 1 (lower is better)
Translates to: NHQYTSQLSPGLLPV*AFQSAGFLPNHPNA
Trigger: GGCATTTGGATGATTGGGCAAAAAGCCAGCTGATTGAAATGCTCAAACAGGCAGCAGCCCTGGTGATAACTGTGATGTATACTGATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR TCA 90 bp AGCTGGTTATTGCTCGTTATAAGAAACCGTTCTCCTGCAACAAAATaGGCTTCTTGCTCCAATTCCTTGAGACGAGCCCCAAGAAGTGCT +
Preference number: 1 (lower is better)
Translates to: SWLLLVIRNRSPATK*ASCSNSLRRAPRSA
Trigger: AGCACTTCTTGGGGCTCGTCTCAAGGAATTGGAGCAAGAAGCTCATTTTGTTGCAGGAGAACGGTTTCTTATAACGAGCAATAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR TCA 90 bp ATATTAGGATGCTTGGCTGAAAGTCTTCCAGTCACAGTTCCAGTCTaGTTCCATGTAGAGGAAATGGAGCCCTTTTTCATGCAAGCTAGT +
Preference number: 1 (lower is better)
Translates to: ILGCLAESLPVTVPV*FHVEEMEPFFMQAS
Trigger: ACTAGCTTGCATGAAAAAGGGCTCCATTTCCTCTACATGGAATCAGACTGGAACTGTGACTGGAAGACTTTCAGCCAAGCATCCTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR TCA 90 bp TTAGAATCCACTAAATCACCTGAATGCATAGCAGACATAATCTTCTaGGCAACACTGGAGAGCGGTGTATTACAGAGATCAAAGCCTACC +
Preference number: 1 (lower is better)
Translates to: LESTKSPECIADIIF*ATLESGVLQRSKPT
Trigger: GGTAGGCTTTGATCTCTGTAATACACCGCTCTCCAGTGTTGCTCAGAAGATTATGTCTGCTATGCATTCAGGTGATTTAGTGGATTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243706.8
ENST00000443786.3
ENST00000672739.1
3UTR TCA 90 bp TCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTaGAGGGGAGTATATTTCCACCTCTGTCAAGTATGCACCCTCTAT +
Preference number: 1 (lower is better)
Translates to: SYYSCQRHFIILTGF*RGVYFHLCQVCTLY
Trigger: ATAGAGGGTGCATACTTGACAGAGGTGGAAATATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
3UTR CCA 90 bp GAACAGGTGAGGAATATTCTTAAAGGTATTCCTACAAAGCTCACATaGTATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCA +
Preference number: 1 (lower is better)
Translates to: EQVRNILKGIPTKLT*YLPQAMYKLGTQEA
Trigger: TGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATACCATGTGAGCTTTGTAGGAATACCTTTAAGAATATTCCTCACCTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR CAA 90 bp AGCAGCGGAGCCTTGCACCACGAAGTTCACTGCCTGTCGCTCTGCTaGTGCCCGGAGTTGCTGGTCATGAGCGTGAATCCTTGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: SSGALHHEVHCLSLC*CPELLVMSVNPWQG
Trigger: CCCCTGCCAAGGATTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAAGGCTCCGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR-3UTR TCA 90 bp GGCCAGCTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTTGGGTGTGGCCTTTGGATaGAACAAACATGGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: GQLAEVSSGAYGARGTVLGVAFG*NKHGPR
Trigger: CCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACC...CAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR GCA 90 bp GGCCAGCTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTTGGTGCACTCAGCATTCTaGACCATCGCCACAGCTCTC +
Preference number: 2 (lower is better)
Translates to: GQLAEVSSGAYGARGTVLVHSAF*TIATAL
Trigger: GAGAGCTGTGGCGATGGTGCAGAATGCTGAGTGCAC...CAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CAA 90 bp CTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTaGAGGTCCCATGGCACACGGTTCATGGTGCACTCAGCATTCTGC +
Preference number: 2 (lower is better)
Translates to: LAEVSSGAYGARGTV*RSHGTRFMVHSAFC
Trigger: GCAGAATGCTGAGTGCACCATGAACCGTGTGCCATGGGACCTCAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CAA 90 bp TTGCACCACGAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTaGCTGGTCATGAGCGTGAATCCTTGGCAGGGGTCTCCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: LHHEVHCLSLCLCPE*LVMSVNPWQGSPSA
Trigger: GGCAGAAGGAGACCCCTGCCAAGGATTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
3UTR-3UTR TCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTCTACCATCCGTGCCTTaGTCTGCCCTGCTGGCCCCC +
Preference number: 2 (lower is better)
Translates to: EAQSALNECKRGGSWASSLPSVP*SALLAP
Trigger: GGGGGCCAGCAGGGCAGATCAAGGCACGGATGGTAG...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR TCA 90 bp GGCCAGCTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTTGCCCTCGGGGAGATCGTaGGAATCTTGTCTTCTTTAC +
Preference number: 2 (lower is better)
Translates to: GQLAEVSSGAYGARGTVLPSGRS*ESCLLY
Trigger: GTAAAGAAGACAAGATTCTCACGATCTCCCCGAGGG...CAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR GCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTATCCGTGCCTTGATCTaGCCTGCTGGCCCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: EAQSALNECKRGGSWASSIRALI*PAGPLG
Trigger: GCCCAGGGGGCCAGCAGGGCAGATCAAGGCACGGAT...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR CCA 90 bp TCAGGAGGGGACGGGGGCCCGATAAGCAGAGATGGTGATCATCAGAATCACGAGCACCACCCACTGACCTaGCCGTCAAGGTGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: SGGDGGPISRDGDHQNHEHHPLT*PSRCGK
Trigger: CTTCCCACACCTTGACGGCCAGGTCAGTGGGTGGTG...CTCGTGATTCTGATGATCACCATCTCTGCTTATCGGGCCCCCGTCCCCTCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR-3UTR CCA 90 bp CCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAACAGGCCGGGGCATCTaGACAGCCATGGCCACCCTC +
Preference number: 2 (lower is better)
Translates to: PFWGDCSFDSAGAALTCQTGRGI*TAMATL
Trigger: GAGGGTGGCCATGGCTGTCCAGATGCCCCGGCCTGT...TTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CAA 90 bp CTCCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTaGCTCTCTGTCTGCGTGTGTCACCTGTTCCACGGGCACATCCTT +
Preference number: 2 (lower is better)
Translates to: LLPCSIDHRVHHLLG*LSVCVCHLFHGHIL
Trigger: AAGGATGTGCCCGTGGAACAGGTGACACACGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
3UTR-3UTR TCA 90 bp GGCCAGCTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTTGTCCATCTACAAAGGTTaGCTTGATCTTGTGAACCTG +
Preference number: 2 (lower is better)
Translates to: GQLAEVSSGAYGARGTVLSIYKG*LDLVNL
Trigger: CAGGTTCACAAGATCAAGTCAACCTTTGTAGATGGA...CAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR TCA 90 bp TCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGATCTCTCGAAGCTTCTGCATGCCTGCTGTaGGTAGCCCCCAGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: SFDSAGAALTCQRGSLEASACLL*VAPRAF
Trigger: GAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGA...AGCTTCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR-3UTR GCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTCACAACTACCATCCGTaGCTTGATCTGCCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: EAQSALNECKRGGSWASSHNYHP*LDLPCW
Trigger: CCAGCAGGGCAGATCAAGGCACGGATGGTAGTTGTG...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR TCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTGGAAGCTCATGCCTGTaGTCCCTGCACTTTGGTAGA +
Preference number: 2 (lower is better)
Translates to: EAQSALNECKRGGSWASSGSSCL*SLHFGR
Trigger: TCTACCAAAGTGCAGGGATCACAGGCATGAGCTTCC...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR TCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTGCAGACATAATCTTCTaGGCAACACTGGAGAGCGGT +
Preference number: 2 (lower is better)
Translates to: EAQSALNECKRGGSWASSADIIF*ATLESG
Trigger: ACCGCTCTCCAGTGTTGCTCAGAAGATTATGTCTGC...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR TCA 90 bp CCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAACTGACACTGAAGGACTaGGGAGACAGCTTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: PFWGDCSFDSAGAALTCQLTLKD*GDSLAE
Trigger: TTCTGCCAAGCTGTCTCCTCAGTCCTTCAGTGTCAG...TTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR TCA 90 bp CTGGTGACACTGGGCAATAGCTGCTCGGGCGAAGTCCTTGATTTTCTTGTACTTTGGTCAGCAGACAGCTaGTCTGTGAGCCTGACACTG +
Preference number: 2 (lower is better)
Translates to: LVTLGNSCSGEVLDFLVLWSADS*SVSLTL
Trigger: CAGTGTCAGGCTCACAGATCAGCTGTCTGCTGACCA...AAGTACAAGAAAATCAAGGACTTCGCCCGAGCAGCTATTGCCCAGTGTCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR TCA 90 bp TGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTCTGCGTGCTTTACCACTGCTTCTaGTGTAGACGGGTATTTCTG +
Preference number: 2 (lower is better)
Translates to: CSIDHRVHHLLGLLSVCVLYHCF*CRRVFL
Trigger: CAGAAATACCCGTCTACATCAGAAGCAGTGGTAAAG...CACGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR-3UTR CCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTTATAAATCAAGCATCTaGGCAGGGGCATGGTGGCTT +
Preference number: 2 (lower is better)
Translates to: EAQSALNECKRGGSWASSYKSSI*AGAWWL
Trigger: AAGCCACCATGCCCCTGCCCAGATGCTTGATTTATA...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR CCA 90 bp CACAGTTCCAGTCTGATTCCATGTAGAGGAAATGGAGCCCTTTTTCATGCAAGCGAAGAAACGGGGGTCTaGTCAGCTCCTAGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: HSSSLIPCRGNGALFHASEETGV*SAPSWV
Trigger: CACCCAGCTAGGAGCTGACCAGACCCCCGTTTCTTC...GCTTGCATGAAAAAGGGCTCCATTTCCTCTACATGGAATCAGACTGGAACTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR TCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTATTCAGACTCTAAAATaGATGCAGGCAGGCCAAGGA +
Preference number: 2 (lower is better)
Translates to: EAQSALNECKRGGSWASSIQTLK*MQAGQG
Trigger: TCCTTGGCCTGCCTGCATTCATTTTAGAGTCTGAAT...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR TCA 90 bp CCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAATCCTCTTTGTTCACCTaGATGGCATGGCTTTCCATC +
Preference number: 2 (lower is better)
Translates to: PFWGDCSFDSAGAALTCQSSLFT*MAWLSI
Trigger: GATGGAAAGCCATGCCATTCAGGTGAACAAAGAGGA...TTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR GCA 90 bp GGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCATATCACCAGGGCTGCTaGCTGTTTGAGCATTTCAAT +
Preference number: 2 (lower is better)
Translates to: GISATPFWGDCSFDSAGAYHQGC*LFEHFN
Trigger: ATTGAAATGCTCAAACAGGCAGCAGCCCTGGTGATA...TGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR CCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACAGTAATTCCGGCACTTTaGGAGGCCGGGAGAGGGGAT +
Preference number: 2 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTVIPAL*EAGRGD
Trigger: ATCCCCTCTCCCGGCCTCCCAAAGTGCCGGAATTAC...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR CCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGCCTACAAAGCTCACATaGTATTTACCACAGGCCATG +
Preference number: 2 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWPTKLT*YLPQAM
Trigger: CATGGCCTGTGGTAAATACCATGTGAGCTTTGTAGG...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR CCA 90 bp TCCATCACTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCGCATCTGGACAGCCATaGCCACCCTCTGCTTGGCGT +
Preference number: 2 (lower is better)
Translates to: SITAKIGIRGSSKVRNSCASGQP*PPSAWR
Trigger: ACGCCAAGCAGAGGGTGGCCATGGCTGTCCAGATGC...GCAACTATTTCGTACTTTGGAGCTTCCTCTGATACCAATTTTGGCAGTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR CCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTAAGTCAAGGTTTGGGTaGGGACAGTATAAATCAAGC +
Preference number: 2 (lower is better)
Translates to: EAQSALNECKRGGSWASSKSRFG*GQYKSS
Trigger: GCTTGATTTATACTGTCCCCACCCAAACCTTGACTT...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR TCA 90 bp GGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAAAAGAGTCAATGAGCTaGTGCTCTTCTGTTTTTGGT +
Preference number: 2 (lower is better)
Translates to: GISATPFWGDCSFDSAGAKESMS*CSSVFG
Trigger: ACCAAAAACAGAAGAGCATCAGCTCATTGACTCTTT...TGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR CCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACACACTGCATTCCAGCCTaGAGACAGAGTGAGACTCTA +
Preference number: 2 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTHCIPA*RQSETL
Trigger: TAGAGTCTCACTCTGTCTCCAGGCTGGAATGCAGTG...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR CCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTAAACATGAGGGGACTTaGCTATTTCACATATTAAGG +
Preference number: 2 (lower is better)
Translates to: EAQSALNECKRGGSWASSKHEGT*LFHILR
Trigger: CCTTAATATGTGAAATAGCCAAGTCCCCTCATGTTT...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR TCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTTTTGACAGTCAAACATaGGGGGACTTGGCTATTTCA +
Preference number: 2 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIFDSQT*GDLAIS
Trigger: TGAAATAGCCAAGTCCCCTCATGTTTGACTGTCAAA...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR TCA 90 bp CCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAGTCTTCAAGTTGTACTaGATACTTAACACTGGACTT +
Preference number: 2 (lower is better)
Translates to: PFWGDCSFDSAGAALTCQVFKLY*ILNTGL
Trigger: AAGTCCAGTGTTAAGTATTCAGTACAACTTGAAGAC...TTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR CCA 90 bp TCCATCACTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCTGGTCAGCTCCTAGCTaGGTGGAACCATCAGTATAC +
Preference number: 2 (lower is better)
Translates to: SITAKIGIRGSSKVRNSCWSAPS*VEPSVY
Trigger: GTATACTGATGGTTCCACCCAGCTAGGAGCTGACCA...GCAACTATTTCGTACTTTGGAGCTTCCTCTGATACCAATTTTGGCAGTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR TCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTCAGCAGAATTTTATTTaGCAGTCAAACATGAGGGGA +
Preference number: 2 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIQQNFI*QSNMRG
Trigger: TCCCCTCATGTTTGACTGTCAAATAAAATTCTGCTG...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR TCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACATTTGACAGTCAAACATaGGGGGACTTGGCTATTTCA +
Preference number: 2 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTFDSQT*GDLAIS
Trigger: TGAAATAGCCAAGTCCCCTCATGTTTGACTGTCAAA...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR GCA 90 bp ATCACTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCCATGGCAAATTGTTGATGTaGCTCCTGTTCTTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: ITAKIGIRGSSKVRNSCHGKLLM*LLFLVP
Trigger: TGGGACCAAGAACAGGAGGCACATCAACAATTTGCC...ATGGCAACTATTTCGTACTTTGGAGCTTCCTCTGATACCAATTTTGGCAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR GCA 90 bp TCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGATCTCTCGAAGCTATAAAATCAGCAACATaGTTCCAACTGCCATCATTG +
Preference number: 2 (lower is better)
Translates to: SFDSAGAALTCQRGSLEAIKSAT*FQLPSL
Trigger: CAATGATGGCAGTTGGAAGCATGTTGCTGATTTTAT...AGCTTCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR GCA 90 bp TCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGATCTCTCGAAGCTCTATTTGAATGTAGATaGATGGATCATCTGACACAA +
Preference number: 2 (lower is better)
Translates to: SFDSAGAALTCQRGSLEALFECR*MDHLTQ
Trigger: TTGTGTCAGATGATCCATGCATCTACATTCAAATAG...AGCTTCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR CCA 90 bp TCAGAGGAAGCTCCAAAGTACGAAATAGTTGCCATAAACCATAATCCACAATATTGGCCACCCTCTGCTTaGCGTTTTACTAACACCACA +
Preference number: 2 (lower is better)
Translates to: SEEAPKYEIVAINHNPQYWPPSA*RFTNTT
Trigger: TGTGGTGTTAGTAAAACGCCAAGCAGAGGGTGGCCA...ATATTGTGGATTATGGTTTATGGCAACTATTTCGTACTTTGGAGCTTCCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR CCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATCCAACCACAAACTATTaGCCCAGGCTTGCAAATTTA +
Preference number: 2 (lower is better)
Translates to: IIAARGISLFLPVFEGEYPTTNY*PRLANL
Trigger: TAAATTTGCAAGCCTGGGCCAATAGTTTGTGGTTGG...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
3UTR CAA 90 bp AATCTTCAAATAAACCTACCTAGTAACACAACGATTATAAGTAACTaGGGTAATTACGGCAGACACACAACTACCATCCGTGCCTTGATC +
Preference number: 2 (lower is better)
Translates to: NLQINLPSNTTIISN*GNYGRHTTTIRALI
Trigger: GATCAAGGCACGGATGGTAGTTGTGTGTCTGCCGTAATTACCCAAGTTACTTATAATCGTTGTGTTACTAGGTAGGTTTATTTGAAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR TCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGACAGATGCCTCAATATaGATGGATCAAAACGTTAAG +
Preference number: 2 (lower is better)
Translates to: PHIIAARGISLFLPVFEGTDASI*MDQNVK
Trigger: CTTAACGTTTTGATCCATTCATATTGAGGCATCTGT...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
3UTR-3UTR TCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATACAGCAGAATTTTATTTaGCAGTCAAACATGAGGGGA +
Preference number: 2 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIQQNFI*QSNMRG
Trigger: TCCCCTCATGTTTGACTGTCAAATAAAATTCTGCTG...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR TCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATATCTTGTAGAAACTTTTaGGTCCCCAGAATTCAGACT +
Preference number: 2 (lower is better)
Translates to: YLPQAMYKLGTQEASDVISCRNF*VPRIQT
Trigger: AGTCTGAATTCTGGGGACTCAAAAGTTTCTACAAGA...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR GCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATCACCTCTGTCAAGTATaGACCCTCTATTATTCAAAA +
Preference number: 2 (lower is better)
Translates to: IIAARGISLFLPVFEGEYHLCQV*TLYYSK
Trigger: TTTTGAATAATAGAGGGTGCATACTTGACAGAGGTG...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
3UTR-3UTR CCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATAAAACATGAGGGGACTTaGCTATTTCACATATTAAGG +
Preference number: 2 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIKHEGT*LFHILR
Trigger: CCTTAATATGTGAAATAGCCAAGTCCCCTCATGTTT...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR CCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATATGCCTCAATATGAATaGATCAAAACGTTAAGTGCA +
Preference number: 2 (lower is better)
Translates to: IIAARGISLFLPVFEGEYMPQYE*IKTLSA
Trigger: TGCACTTAACGTTTTGATCCATTCATATTGAGGCAT...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506763.5
3UTR-3UTR CAA 90 bp GGCCAGCTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTTGTGCCTGTCGCTCTGCTaGTGCCCGGAGTTGCTGGTC +
Preference number: 3 (lower is better)
Translates to: GQLAEVSSGAYGARGTVLCLSLC*CPELLV
Trigger: GACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCA...CAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR GCA 72 bp CTCACTCTGTCGCCCACGCTGGAGACCTCAGCTCACTaGAAGCCCCGCCTCCTGGGTTCATGCCATTCTCCT +
Preference number: 3 (lower is better)
Translates to: LTLSPTLETSAH*KPRLLGSCHSP
Trigger: AGGAGAATGGCATGAACCCAGGAGGCGGGGCTTGCAGTGAGCTGAGGTCTCCAGCGTGGGCGACAGAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR GCA 72 bp GAGGTCAGCAGCGGAGCCTTGCACCACGAAGTTCACTaGCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTC +
Preference number: 3 (lower is better)
Translates to: EVSSGALHHEVH*LSLCLCPELLV
Trigger: GACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAAGGCTCCGCTGCTGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR GCA 72 bp TCTGCACCCCACGCTGGTGGATGGCTGGTTGTTGTCTaGATGCCTGCTGTGAGTAGCCCCCAGGGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: SAPHAGGWLVVV*MPAVSSPQGLP
Trigger: TGGAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGACAACAACCAGCCATCCACCAGCGTGGGGTGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR TCA 72 bp TCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTTaGGGTCCCATGGCACACGGTTCATGGTGCACTCAG +
Preference number: 3 (lower is better)
Translates to: SAAEPMGRVVLS*GPMAHGSWCTQ
Trigger: CTGAGTGCACCATGAACCGTGTGCCATGGGACCTCAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CCA 72 bp AAAGCCCTCCAGAACAGGACCACAGGCCGGGGCATCTaGACAGCCATGGCCACCCTCTGCTTGGCGTTTTAC +
Preference number: 3 (lower is better)
Translates to: KALQNRTTGRGI*TAMATLCLAFY
Trigger: GTAAAACGCCAAGCAGAGGGTGGCCATGGCTGTCCAGATGCCCCGGCCTGTGGTCCTGTTCTGGAGGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CCA 72 bp GCTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTaGTACTGTCTTGAGGTCCCATGGCACACGGTTCAT +
Preference number: 3 (lower is better)
Translates to: ACRGQQRSLWGA*YCLEVPWHTVH
Trigger: ATGAACCGTGTGCCATGGGACCTCAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR TCA 72 bp GAGCGTGAATCCTTGGCAGGGGTCTCCTTCTGCCCATaGTGGACACCACACAGCCTGTCTGGTGACACTGGG +
Preference number: 3 (lower is better)
Translates to: ERESLAGVSFCP*WTPHSLSGDTG
Trigger: CCCAGTGTCACCAGACAGGCTGTGTGGTGTCCATCATGGGCAGAAGGAGACCCCTGCCAAGGATTCACGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
3UTR GCA 72 bp CAGACACACAACTACCATCCGTGCCTTGATCTGCCCTaGTGGCCCCCTGGGCTGAGCAAGTCAAGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: QTHNYHPCLDLP*WPPGLSKSRFG
Trigger: CCCAAACCTTGACTTGCTCAGCCCAGGGGGCCAGCAGGGCAGATCAAGGCACGGATGGTAGTTGTGTGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR GCA 72 bp GGGGGAGACAGCATTTCTGTCTGGAGAGGCCTCATCTaGACCCCACGCTGGTGGATGGCTGGTTGTTGTCTG +
Preference number: 3 (lower is better)
Translates to: GGDSISVWRGLI*TPRWWMAGCCL
Trigger: CAGACAACAACCAGCCATCCACCAGCGTGGGGTGCAGATGAGGCCTCTCCAGACAGAAATGCTGTCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR CCA 72 bp ACACACAACTACCATCCGTGCCTTGATCTGCCCTGCTaGCCCCCTGGGCTGAGCAAGTCAAGGTTTGGGTGG +
Preference number: 3 (lower is better)
Translates to: THNYHPCLDLPC*PPGLSKSRFGW
Trigger: CCACCCAAACCTTGACTTGCTCAGCCCAGGGGGCCAGCAGGGCAGATCAAGGCACGGATGGTAGTTGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR CCA 72 bp TCTGGAGAGGCCTCATCTGCACCCCACGCTGGTGGATaGCTGGTTGTTGTCTGCATGCCTGCTGTGAGTAGC +
Preference number: 3 (lower is better)
Translates to: SGEASSAPHAGG*LVVVCMPAVSS
Trigger: GCTACTCACAGCAGGCATGCAGACAACAACCAGCCATCCACCAGCGTGGGGTGCAGATGAGGCCTCTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR-3UTR CAA 90 bp GGCCAGCTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTTGCAATCAGCTGGCTTTTaGCCCAATCATCCAAATGCC +
Preference number: 3 (lower is better)
Translates to: GQLAEVSSGAYGARGTVLQSAGF*PNHPNA
Trigger: GGCATTTGGATGATTGGGCAAAAAGCCAGCTGATTG...CAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR GCA 72 bp TCCCATGGCACACGGTTCATGGTGCACTCAGCATTCTaGACCATCGCCACAGCTCTCACGGTACCTCCACAC +
Preference number: 3 (lower is better)
Translates to: SHGTRFMVHSAF*TIATALTVPPH
Trigger: GTGTGGAGGTACCGTGAGAGCTGTGGCGATGGTGCAGAATGCTGAGTGCACCATGAACCGTGTGCCATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR GCA 72 bp GGAGCCTTGCACCACGAAGTTCACTGCCTGTCGCTCTaGTTGTGCCCGGAGTTGCTGGTCATGAGCGTGAAT +
Preference number: 3 (lower is better)
Translates to: GALHHEVHCLSL*LCPELLVMSVN
Trigger: ATTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR-3UTR CAA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGTGTAATTCCGGCACTTaGGGAGGCCGGGAGAGGGGA +
Preference number: 3 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWCNSGT*GGRERG
Trigger: TCCCCTCTCCCGGCCTCCCAAAGTGCCGGAATTACA...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR CAA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTTGTAATTCCGGCACTTaGGGAGGCCGGGAGAGGGGA +
Preference number: 3 (lower is better)
Translates to: EAQSALNECKRGGSWASSCNSGT*GGRERG
Trigger: TCCCCTCTCCCGGCCTCCCAAAGTGCCGGAATTACA...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR TCA 72 bp ATCCGTGCCTTGATCTGCCCTGCTGGCCCCCTGGGCTaGGCAAGTCAAGGTTTGGGTGGGGACAGTATAAAT +
Preference number: 3 (lower is better)
Translates to: IRALICPAGPLG*ASQGLGGDSIN
Trigger: ATTTATACTGTCCCCACCCAAACCTTGACTTGCTCAGCCCAGGGGGCCAGCAGGGCAGATCAAGGCACGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR GCA 72 bp TTGCACCACGAAGTTCACTGCCTGTCGCTCTGCTTGTaGCCGGAGTTGCTGGTCATGAGCGTGAATCCTTGG +
Preference number: 3 (lower is better)
Translates to: LHHEVHCLSLCL*PELLVMSVNPW
Trigger: CCAAGGATTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
3UTR GCA 72 bp GCTGTCTTGCACCACGAAGTTCACTGCCTGTCGCTCTaGTTGTGCCCGGAGTTGCTGGTCATGAGCGTGAAT +
Preference number: 3 (lower is better)
Translates to: AVLHHEVHCLSL*LCPELLVMSVN
Trigger: ATTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAAGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CCA 72 bp TCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTaGTTTGCTCTCTGTCTGCGTGTGTCACCTGTTCCA +
Preference number: 3 (lower is better)
Translates to: SLLHRPPRTPPS*FALCLRVSPVP
Trigger: TGGAACAGGTGACACACGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
3UTR-3UTR CAA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGAAGCAGGAGAATCACTaGAACCTGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWKQENH*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCTT...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR-3UTR CAA 90 bp ATGGCCAGCTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTAGCAGAGTGCTCTATTaGAATGTAGATGCATGGATC +
Preference number: 3 (lower is better)
Translates to: MASLQRSAAEPMGRVVLSSRVLY*NVDAWI
Trigger: GATCCATGCATCTACATTCAAATAGAGCACTCTGCT...AGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAGCTGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR CAA 90 bp GTTGTCTGCATGCCTGCTGTGAGTAGCCCCCAGGGCCTTCCATGGGCTGAGAGCGAGATCGTGAGAATCTaGTCTTCTTTACCACTGCTT +
Preference number: 3 (lower is better)
Translates to: VVCMPAVSSPQGLPWAESEIVRI*SSLPLL
Trigger: AAGCAGTGGTAAAGAAGACAAGATTCTCACGATCTC...GCTCTCAGCCCATGGAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672725.1
3UTR GCA 72 bp CACCACACAGCCTGTCTGGTGACACTGGGCAATAGCTaGTCGGGCGAAGTCCTTGATTTTCTTGTACTTCTG +
Preference number: 3 (lower is better)
Translates to: HHTACLVTLGNS*SGEVLDFLVLL
Trigger: CAGAAGTACAAGAAAATCAAGGACTTCGCCCGAGCAGCTATTGCCCAGTGTCACCAGACAGGCTGTGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
3UTR CCA 72 bp CAGAAGAAACGGGGGTCTGGTCAGCTCCTAGCTGGGTaGAACCATCAGTATACATCACAGTTATCACCAGGG +
Preference number: 3 (lower is better)
Translates to: QKKRGSGQLLAG*NHQYTSQLSPG
Trigger: CCCTGGTGATAACTGTGATGTATACTGATGGTTCCACCCAGCTAGGAGCTGACCAGACCCCCGTTTCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR CAA 90 bp GGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGTTCCGGGCAAATTGTaGATGTGCCTCCTGTTCTTG +
Preference number: 3 (lower is better)
Translates to: GISATPFWGDCSFDSAGAVPGKL*MCLLFL
Trigger: CAAGAACAGGAGGCACATCAACAATTTGCCCGGAAC...TGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR CAA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGCAGGCCATGTATAAATaGGGCACTCAAGAAGCATCT +
Preference number: 3 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWQAMYK*GTQEAS
Trigger: AGATGCTTCTTGAGTGCCCAATTTATACATGGCCTG...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR TCA 72 bp AACACGAAAGTTAGCAAGCAGAAGCTCAGTCTGCACTaGATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCAT +
Preference number: 3 (lower is better)
Translates to: NTKVSKQKLSLH*MSVKGAGAGLH
Trigger: ATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTCTGCTTGCTAACTTTCGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR TCA 72 bp AGAGTGCTCTATTTGAATGTAGATGCATGGATCATCTaGCACAAAGCCCTCCAGAACAGGACCACAGGCCGG +
Preference number: 3 (lower is better)
Translates to: RVLYLNVDAWII*HKALQNRTTGR
Trigger: CCGGCCTGTGGTCCTGTTCTGGAGGGCTTTGTGTCAGATGATCCATGCATCTACATTCAAATAGAGCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR TCA 72 bp TATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTaGCTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGG +
Preference number: 3 (lower is better)
Translates to: YFCNPVLGRLFL*LSRCSFNLPKR
Trigger: CCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
3UTR CCA 72 bp GCTATAATTTACCTGCAGAAACTGGCCGTCAAGGTGTaGGAAGCAGCCACTGCAGTGAAGACATGGATCATG +
Preference number: 3 (lower is better)
Translates to: AIIYLQKLAVKV*EAATAVKTWIM
Trigger: CATGATCCATGTCTTCACTGCAGTGGCTGCTTCCCACACCTTGACGGCCAGTTTCTGCAGGTAAATTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR CAA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTGCAGCAGAATTTTATTaGACAGTCAAACATGAGGGG +
Preference number: 3 (lower is better)
Translates to: EAQSALNECKRGGSWASSAAEFY*TVKHEG
Trigger: CCCCTCATGTTTGACTGTCAAATAAAATTCTGCTGC...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR GCA 72 bp GACTGTTCCTTTGACTCAGCAGGTGCAGCTTTAACTTaGCAAAGAGGATCTCTCGAAGCTGGTTATTGCTCG +
Preference number: 3 (lower is better)
Translates to: DCSFDSAGAALT*QRGSLEAGYCS
Trigger: CGAGCAATAACCAGCTTCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR TCA 72 bp TGCTTGGCTGAAAGTCTTCCAGTCACAGTTCCAGTCTaGTTCCATGTAGAGGAAATGGAGCCCTTTTTCATG +
Preference number: 3 (lower is better)
Translates to: CLAESLPVTVPV*FHVEEMEPFFM
Trigger: CATGAAAAAGGGCTCCATTTCCTCTACATGGAATCAGACTGGAACTGTGACTGGAAGACTTTCAGCCAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR TCA 72 bp GTGCTTGGAGATACCTTGGATATTAGGATGCTTGGCTaGAAGTCTTCCAGTCACAGTTCCAGTCTGATTCCA +
Preference number: 3 (lower is better)
Translates to: VLGDTLDIRMLG*KSSSHSSSLIP
Trigger: TGGAATCAGACTGGAACTGTGACTGGAAGACTTTCAGCCAAGCATCCTAATATCCAAGGTATCTCCAAGCAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR GCA 72 bp ACCATCAGTATACATCACAGTTATCACCAGGGCTGCTaGCTGTTTGAGCATTTCAATCAGCTGGCTTTTTGC +
Preference number: 3 (lower is better)
Translates to: TISIHHSYHQGC*LFEHFNQLAFC
Trigger: GCAAAAAGCCAGCTGATTGAAATGCTCAAACAGGCAGCAGCCCTGGTGATAACTGTGATGTATACTGATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR GCA 72 bp GGAACCATCAGTATACATCACAGTTATCACCAGGGCTaGTGCCTGTTTGAGCATTTCAATCAGCTGGCTTTT +
Preference number: 3 (lower is better)
Translates to: GTISIHHSYHQG*CLFEHFNQLAF
Trigger: AAAAGCCAGCTGATTGAAATGCTCAAACAGGCAGCAGCCCTGGTGATAACTGTGATGTATACTGATGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR GCA 72 bp CTTTCAGTTCCTGCCAAGACGGAAACTAGCACAAGCTaGTCATATCCTGGGAGAAGCTATAATTTACCTGCA +
Preference number: 3 (lower is better)
Translates to: LSVPAKTETSTS*SYPGRSYNLPA
Trigger: TGCAGGTAAATTATAGCTTCTCCCAGGATATGAGCAGCTTGTGCTAGTTTCCGTCTTGGCAGGAACTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR-3UTR CAA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACAGCAGCAGAATTTTATTaGACAGTCAAACATGAGGGG +
Preference number: 3 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTAAEFY*TVKHEG
Trigger: CCCCTCATGTTTGACTGTCAAATAAAATTCTGCTGC...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR TCA 72 bp AGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTaGAGGGGAGTATATTTCCACCTCTGTCAAGTATGC +
Preference number: 3 (lower is better)
Translates to: SCQRHFIILTGF*RGVYFHLCQVC
Trigger: GCATACTTGACAGAGGTGGAAATATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
3UTR-3UTR CAA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGACCAACCACAAACTATaGGCCCAGGCTTGCAAATTT +
Preference number: 3 (lower is better)
Translates to: PHIIAARGISLFLPVFEGTNHKL*AQACKF
Trigger: AAATTTGCAAGCCTGGGCCAATAGTTTGTGGTTGGT...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506763.5
3UTR TCA 72 bp ACTAAATCACCTGAATGCATAGCAGACATAATCTTCTaGGCAACACTGGAGAGCGGTGTATTACAGAGATCA +
Preference number: 3 (lower is better)
Translates to: TKSPECIADIIF*ATLESGVLQRS
Trigger: TGATCTCTGTAATACACCGCTCTCCAGTGTTGCTCAGAAGATTATGTCTGCTATGCATTCAGGTGATTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243706.8
ENST00000443786.3
ENST00000672739.1
3UTR GCA 72 bp AAGCTGGTTATTGCTCGTTATAAGAAACCGTTCTCCTaGAACAAAATGAGCTTCTTGCTCCAATTCCTTGAG +
Preference number: 3 (lower is better)
Translates to: KLVIARYKKPFS*NKMSFLLQFLE
Trigger: CTCAAGGAATTGGAGCAAGAAGCTCATTTTGTTGCAGGAGAACGGTTTCTTATAACGAGCAATAACCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CCA 72 bp AGGAATATTCTTAAAGGTATTCCTACAAAGCTCACATaGTATTTACCACAGGCCATGTATAAATTGGGCACT +
Preference number: 3 (lower is better)
Translates to: RNILKGIPTKLT*YLPQAMYKLGT
Trigger: AGTGCCCAATTTATACATGGCCTGTGGTAAATACCATGTGAGCTTTGTAGGAATACCTTTAAGAATATTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp GCCTCAGGAGGGGACGGGGGCCCGATAAGCAGAGATGGTGATCATCAGAATCACGCCTTCAGCCAGCGCTaGGGCAGCCCCGACGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASGGDGGPISRDGDHQNHAFSQR*GSPDAR
Trigger: CCTGGCGTCGGGGCTGCCTCAGCGCTGGCTGAAGGC...GTGATTCTGATGATCACCATCTCTGCTTATCGGGCCCCCGTCCCCTCCTGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp GGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCACAGCGGACCGGGCCCTaGTCCCCGGGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GISATPFWGDCSFDSAGAQRTGP*SPGSCW
Trigger: CCAGCAGCTGCCCGGGGATCAGGGCCCGGTCCGCTG...TGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp AGACGGGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGCCTTCAGCCAGCGCTaGGGCAGCCCCGACGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRVFLQPRSGETVPLTQQAFSQR*GSPDAR
Trigger: CCTGGCGTCGGGGCTGCCTCAGCGCTGGCTGAAGGC...CTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CCA 90 bp GCCGCTCCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTAGCTGCTGGAGCACCTaGAAGGAGCCCCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: AAPSLLHRPPRTPPSWFASCWST*KEPPGA
Trigger: CGCTCCTGGGGGCTCCTTCCAGGTGCTCCAGCAGCT...AGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGGAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp AACATGGCCCTCGGGGAGATCGTGAGAATCTTGTCTTCTTTACCACTGCTTCTGCAGCGGACCGGGCCCTaGTCCCCGGGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NMALGEIVRILSSLPLLLQRTGP*SPGSCW
Trigger: CCAGCAGCTGCCCGGGGATCAGGGCCCGGTCCGCTG...CAGAAGCAGTGGTAAAGAAGACAAGATTCTCACGATCTCCCCGAGGGCCATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp AGAGGTCAGCAGCGGAGCCTTGCACCACGAAGTTCACTGCCTGTCGCTCTGCTTGAGACCACCACCCACTaGCCTGGCCGTCAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RGQQRSLAPRSSLPVALLETTTH*PGRQGV
Trigger: CACACCTTGACGGCCAGGTCAGTGGGTGGTGGTCTC...AAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAAGGCTCCGCTGCTGACCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp TGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTCTGCGTGGGGCCTTCCATGGGCTaGGAGCCTCAGGAGGGGACG +
Preference number: 4 (lower is better)
Translates to: CSIDHRVHHLLGLLSVCVGPSMG*EPQEGT
Trigger: CGTCCCCTCCTGAGGCTCTCAGCCCATGGAAGGCCC...CACGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp GCCGCTCCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTTCTGCATGCCTGCTGTaGGTAGCCCCCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: AAPSLLHRPPRTPPSWFASACLL*VAPRAF
Trigger: GAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGA...AGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGGAGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR GCA 90 bp CGAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTAAAGAGGCACCTGGGTaGAGACGGGGATCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RSSLPVALLVPGVAGHERKEAPG*RRGSRP
Trigger: TGGCCGCGATCCCCGTCTGCACCCAGGTGCCTCTTT...ACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR GCA 90 bp GAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTGAAAGAGGCACCTGGGTaGAGACGGGGATCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: EVHCLSLCLCPELLVMSVKEAPG*RRGSRP
Trigger: TGGCCGCGATCCCCGTCTGCACCCAGGTGCCTCTTT...CACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CCA 90 bp GCCGCTCCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTGCGACGGCGTGGTCGTaGGGGATGACTGTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: AAPSLLHRPPRTPPSWFAATAWS*GMTVCA
Trigger: TGCGCAAACAGTCATCCCCCACGACCACGCCGTCGC...AGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGGAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CAA 72 bp GTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTaGAGGTCCCATGGCACACGGTTCATGGTGCACTCA +
Preference number: 4 (lower is better)
Translates to: VSSGAYGARGTV*RSHGTRFMVHS
Trigger: TGAGTGCACCATGAACCGTGTGCCATGGGACCTCAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp GGCCAGCTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTTGGGGAGACTGTTCCTTTaGCTCAGCAGGTGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GQLAEVSSGAYGARGTVLGRLFL*LSRCSF
Trigger: AAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCC...CAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CCA 90 bp GGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCACCTCACGGGAGCGCCTaGACGCGCGCAAGCGCACAA +
Preference number: 4 (lower is better)
Translates to: GISATPFWGDCSFDSAGAPHGSA*TRASAQ
Trigger: TTGTGCGCTTGCGCGCGTCCAGGCGCTCCCGTGAGG...TGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp GTTGTCTGCATGCCTGCTGTGAGTAGCCCCCAGGGCCTTCCATGGGCTGAGAGCTTGCTGGTTAGGCTGTaGAGACTCTCCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: VVCMPAVSSPQGLPWAESLLVRL*RLSSAH
Trigger: ATGGGCAGAGGAGAGTCTTCACAGCCTAACCAGCAA...GCTCTCAGCCCATGGAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTGCCTTCAGCCAGCGCTaGGGCAGCCCCGACGCCAGG +
Preference number: 4 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIAFSQR*GSPDAR
Trigger: CCTGGCGTCGGGGCTGCCTCAGCGCTGGCTGAAGGC...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443786.3
CDS-3UTR TCA 90 bp CTGGTGACACTGGGCAATAGCTGCTCGGGCGAAGTCCTTGATTTTCTTGTACTTTGCAGAAGACGGGGGTaGCAGGCCCCGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: LVTLGNSCSGEVLDFLVLCRRRG*QAPHSP
Trigger: GGGGCTGTGCGGGGCCTGTCACCCCCGTCTTCTGCA...AAGTACAAGAAAATCAAGGACTTCGCCCGAGCAGCTATTGCCCAGTGTCACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GTTGTCTGCATGCCTGCTGTGAGTAGCCCCCAGGGCCTTCCATGGGCTGAGAGCCTGACACTGAAGGACTaGGGAGACAGCTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VVCMPAVSSPQGLPWAESLTLKD*GDSLAE
Trigger: TTCTGCCAAGCTGTCTCCTCAGTCCTTCAGTGTCAG...GCTCTCAGCCCATGGAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp TGGCTGGTTGTTGTCTGCATGCCTGCTGTGAGTAGCCCCCAGGGCCTTCCATGGGGTGTGGCCTTTGGATaGAACAAACATGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: WLVVVCMPAVSSPQGLPWGVAFG*NKHGPR
Trigger: CCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACC...CCATGGAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGACAACAACCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CCA 90 bp GGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAAGCTGCTGGAGCACCTaGAAGGAGCCCCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: GISATPFWGDCSFDSAGASCWST*KEPPGA
Trigger: CGCTCCTGGGGGCTCCTTCCAGGTGCTCCAGCAGCT...TGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTGCTGGCCCCCTGGGCTaGGCAAGTCAAGGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSAGPLG*ASQGLG
Trigger: ACCCAAACCTTGACTTGCTCAGCCCAGGGGGCCAGC...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp TTTGAAATAGCACGTTCCGGGCAAATTGTTGATGTGCCTCCTGTTCTTGGTCCCTGCAGAAGACGGGGGTaGCAGGCCCCGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: FEIARSGQIVDVPPVLGPCRRRG*QAPHSP
Trigger: GGGGCTGTGCGGGGCCTGTCACCCCCGTCTTCTGCA...GGGACCAAGAACAGGAGGCACATCAACAATTTGCCCGGAACGTGCTATTTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp GAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTGTGGTCAGCAGACAGCTaGTCTGTGAGCCTGACACTG +
Preference number: 4 (lower is better)
Translates to: EVHCLSLCLCPELLVMSVWSADS*SVSLTL
Trigger: CAGTGTCAGGCTCACAGATCAGCTGTCTGCTGACCA...CACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GTTGTCTGCATGCCTGCTGTGAGTAGCCCCCAGGGCCTTCCATGGGCTGAGAGCCCCTCGGGGAGATCGTaGGAATCTTGTCTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: VVCMPAVSSPQGLPWAESPSGRS*ESCLLY
Trigger: GTAAAGAAGACAAGATTCTCACGATCTCCCCGAGGG...GCTCTCAGCCCATGGAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp CACCACACAGCCTGTCTGGTGACACTGGGCAATAGCTGCTCGGGCGAAGTCCTTGGTGTGGCCTTTGGATaGAACAAACATGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: HHTACLVTLGNSCSGEVLGVAFG*NKHGPR
Trigger: CCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACC...AAGGACTTCGCCCGAGCAGCTATTGCCCAGTGTCACCAGACAGGCTGTGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp TGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTCTGCGTGCGCGTGGTACTGTCTTaGGGTCCCATGGCACACGGT +
Preference number: 4 (lower is better)
Translates to: CSIDHRVHHLLGLLSVCVRVVLS*GPMAHG
Trigger: ACCGTGTGCCATGGGACCTCAAGACAGTACCACGCG...CACGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CAA 72 bp GAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTaGCTGGTCATGAGCGTGAATCCTTGGCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: EVHCLSLCLCPE*LVMSVNPWQGS
Trigger: AGACCCCTGCCAAGGATTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
3UTR CAA 72 bp GCCTTGCACCACGAAGTTCACTGCCTGTCGCTCTGCTaGTGCCCGGAGTTGCTGGTCATGAGCGTGAATCCT +
Preference number: 4 (lower is better)
Translates to: ALHHEVHCLSLC*CPELLVMSVNP
Trigger: AGGATTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp TGGCTGGTTGTTGTCTGCATGCCTGCTGTGAGTAGCCCCCAGGGCCTTCCATGGGCAGACATAATCTTCTaGGCAACACTGGAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: WLVVVCMPAVSSPQGLPWADIIF*ATLESG
Trigger: ACCGCTCTCCAGTGTTGCTCAGAAGATTATGTCTGC...CCATGGAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGACAACAACCAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTAGGGTCACCCAGCTGTaGCACCTAAGCACGCTCAGG +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSRVTQL*HLSTLR
Trigger: CCTGAGCGTGCTTAGGTGTCACAGCTGGGTGACCCT...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443786.3
CDS-3UTR TCA 90 bp CCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTAGGGTCACCCAGCTGTaGCACCTAAGCACGCTGACA +
Preference number: 4 (lower is better)
Translates to: PSLLHRPPRTPPSWFALCRVTQL*HLSTLT
Trigger: TGTCAGCGTGCTTAGGTGTCACAGCTGGGTGACCCT...ACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTGCTTGCTCCAATTCCTTaGGACGAGCCCCAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: EVHCLSLCLCPELLVMSVLAPIP*DEPQEV
Trigger: CACTTCTTGGGGCTCGTCTCAAGGAATTGGAGCAAG...CACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GCCTCAGGAGGGGACGGGGGCCCGATAAGCAGAGATGGTGATCATCAGAATCACAAGCAGCCACTGCAGTaGAGACATGGATCATGGCCA +
Preference number: 4 (lower is better)
Translates to: ASGGDGGPISRDGDHQNHKQPLQ*RHGSWP
Trigger: TGGCCATGATCCATGTCTTCACTGCAGTGGCTGCTT...GTGATTCTGATGATCACCATCTCTGCTTATCGGGCCCCCGTCCCCTCCTGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTGCAAGCCCCGCCTCCTaGGTTCATGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSASPAS*VHAILL
Trigger: CAGGAGAATGGCATGAACCCAGGAGGCGGGGCTTGC...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR CAA 72 bp GTCTTGCACCACGAAGTTCACTGCCTGTCGCTCTGCTaGTGCCCGGAGTTGCTGGTCATGAGCGTGAATCCT +
Preference number: 4 (lower is better)
Translates to: VLHHEVHCLSLC*CPELLVMSVNP
Trigger: AGGATTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTCTACCATCCGTGCCTTaGTCTGCCCTGCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ECRQAKEVLILCGTSRDILPSVP*SALLAP
Trigger: GGGGGCCAGCAGGGCAGATCAAGGCACGGATGGTAG...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGCAGCGGACCGGGCCCTaGTCCCCGGGCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PHIIAARGISLFLPVFEGQRTGP*SPGSCW
Trigger: CCAGCAGCTGCCCGGGGATCAGGGCCCGGTCCGCTG...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR TCA 90 bp AGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTGAACTGACACTGAAGGACTaGGGAGACAGCTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SSLPVALLVPGVAGHERELTLKD*GDSLAE
Trigger: TTCTGCCAAGCTGTCTCCTCAGTCCTTCAGTGTCAG...TTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp CCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTGGGCTGCTGCCTGTTTaGGCATTTCAATCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PSLLHRPPRTPPSWFALCGLLPV*AFQSAG
Trigger: GCCAGCTGATTGAAATGCTCAAACAGGCAGCAGCCC...ACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTGTTCCGGGCAAATTGTTaGTGTGCCTCCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: EVHCLSLCLCPELLVMSVFRANC*CASCSW
Trigger: CCAAGAACAGGAGGCACATCAACAATTTGCCCGGAA...CACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR GCA 90 bp GTTGTCTGCATGCCTGCTGTGAGTAGCCCCCAGGGCCTTCCATGGGCTGAGAGCCAAATGTATGCGAGCTaGAGTCTAGCCATCTCTAGT +
Preference number: 4 (lower is better)
Translates to: VVCMPAVSSPQGLPWAESQMYAS*SLAISS
Trigger: ACTAGAGATGGCTAGACTGCAGCTCGCATACATTTG...GCTCTCAGCCCATGGAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp AGACGGGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGGGCTGCTGCCTGTTTaGGCATTTCAATCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RRVFLQPRSGETVPLTQQGLLPV*AFQSAG
Trigger: GCCAGCTGATTGAAATGCTCAAACAGGCAGCAGCCC...CTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACCCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp CACCACACAGCCTGTCTGGTGACACTGGGCAATAGCTGCTCGGGCGAAGTCCTTTCCTCTTTGTTCACCTaGATGGCATGGCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: HHTACLVTLGNSCSGEVLSSLFT*MAWLSI
Trigger: GATGGAAAGCCATGCCATTCAGGTGAACAAAGAGGA...AAGGACTTCGCCCGAGCAGCTATTGCCCAGTGTCACCAGACAGGCTGTGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp TGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTCTGCGTGGGGAGACTGTTCCTTTaGCTCAGCAGGTGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: CSIDHRVHHLLGLLSVCVGRLFL*LSRCSF
Trigger: AAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCC...CACGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAACACAGCCTGTCTGGTaGCACTGGGCAATAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GISATPFWGDCSFDSAGATQPVW*HWAIAA
Trigger: AGCAGCTATTGCCCAGTGTCACCAGACAGGCTGTGT...TGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp AGACGGGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGACACAGCCTGTCTGGTaGCACTGGGCAATAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRVFLQPRSGETVPLTQQTQPVW*HWAIAA
Trigger: AGCAGCTATTGCCCAGTGTCACCAGACAGGCTGTGT...CTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACCCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp AGAGGTCAGCAGCGGAGCCTTGCACCACGAAGTTCACTGCCTGTCGCTCTGCTTGATAAGCAGAGATGGTaGTCATCAGAATCACGAGCC +
Preference number: 4 (lower is better)
Translates to: RGQQRSLAPRSSLPVALLDKQRW*SSESRA
Trigger: GGCTCGTGATTCTGATGATCACCATCTCTGCTTATC...AAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAAGGCTCCGCTGCTGACCTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp CGAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTCACTGCGCCCAGCCTTaGATCAACTTTTCTAGACTT +
Preference number: 4 (lower is better)
Translates to: RSSLPVALLVPGVAGHERHCAQP*INFSRL
Trigger: AAGTCTAGAAAAGTTGATTCAAGGCTGGGCGCAGTG...ACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGCACAACTACCATCCGTaGCTTGATCTGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWHNYHP*LDLPCW
Trigger: CCAGCAGGGCAGATCAAGGCACGGATGGTAGTTGTG...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp GGCCAGCTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTTGTCATCAGTAAGAGCCTaGAGTTCATTACTGATCTTA +
Preference number: 4 (lower is better)
Translates to: GQLAEVSSGAYGARGTVLSSVRA*SSLLIL
Trigger: TAAGATCAGTAATGAACTTCAGGCTCTTACTGATGA...CAAGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTTTGCTGGTTAGGCTGTaGAGACTCTCCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSLLVRL*RLSSAH
Trigger: ATGGGCAGAGGAGAGTCTTCACAGCCTAACCAGCAA...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATGCCTTCAGCCAGCGCTaGGGCAGCCCCGACGCCAGG +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYAFSQR*GSPDAR
Trigger: CCTGGCGTCGGGGCTGCCTCAGCGCTGGCTGAAGGC...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR TCA 90 bp TCTGCTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGCTTGCTCCAATTCCTTaGGACGAGCCCCAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SAARKVWPLDETNMALGELAPIP*DEPQEV
Trigger: CACTTCTTGGGGCTCGTCTCAAGGAATTGGAGCAAG...CTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp CTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGATCGAAGCAGCCACTGCAGTaGAGACATGGATCATGGCCA +
Preference number: 4 (lower is better)
Translates to: LLERCGLWMKQTWPSGRSKQPLQ*RHGSWP
Trigger: TGGCCATGATCCATGTCTTCACTGCAGTGGCTGCTT...CGATCTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR GCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTCCAGAAGGCAGAGGTTaGAGTGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSPEGRG*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAACCTCTGCCTTCTGG...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp CCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTTGTCCACAGCCTTGCTaGTTAGGCTGTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: PSLLHRPPRTPPSWFALCCPQPC*LGCEDS
Trigger: AGAGTCTTCACAGCCTAACCAGCAAGGCTGTGGACA...ACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGGTAATGCCAGCACTATaGAAGGCCAAGGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWVMPAL*KAKAGR
Trigger: TCTACCCGCCTTGGCCTTCCATAGTGCTGGCATTAC...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGAAAAGGGGCGGGAGCTaGGCTTCATCTGTCTACATG +
Preference number: 4 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWKRGGS*ASSVYM
Trigger: CATGTAGACAGATGAAGCCCAGCTCCCGCCCCTTTT...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTAAAAGGGGCGGGAGCTaGGCTTCATCTGTCTACATG +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSKRGGS*ASSVYM
Trigger: CATGTAGACAGATGAAGCCCAGCTCCCGCCCCTTTT...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp TCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGATCTCTCGAAGCTCACAAGGCGACGGCGTaGTCGTGGGGGATGACTGTT +
Preference number: 4 (lower is better)
Translates to: SFDSAGAALTCQRGSLEAHKATA*SWGMTV
Trigger: AACAGTCATCCCCCACGACCACGCCGTCGCCTTGTG...AGCTTCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACAGCTGGCCCCCTGGGCTaGGCAAGTCAAGGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTAGPLG*ASQGLG
Trigger: ACCCAAACCTTGACTTGCTCAGCCCAGGGGGCCAGC...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp GTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGGCAGACATAATCTTCTaGGCAACACTGGAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: VFLQPRSGETVPLTQQVQADIIF*ATLESG
Trigger: ACCGCTCTCCAGTGTTGCTCAGAAGATTATGTCTGC...CTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTAAGCTCAGTCTGCACTaGATGAGTGTAAAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSKLSLH*MSVKGA
Trigger: CGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTT...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATTGCAGAAGACGGGGGTaGCAGGCCCCGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYCRRRG*QAPHSP
Trigger: GGGGCTGTGCGGGGCCTGTCACCCCCGTCTTCTGCA...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR TCA 90 bp TGGCTGGTTGTTGTCTGCATGCCTGCTGTGAGTAGCCCCCAGGGCCTTCCATGGAAAGAGTCAATGAGCTaGTGCTCTTCTGTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: WLVVVCMPAVSSPQGLPWKESMS*CSSVFG
Trigger: ACCAAAAACAGAAGAGCATCAGCTCATTGACTCTTT...CCATGGAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGACAACAACCAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp TCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGATCTCTCGAAGCTGTCTCCTTCTGCCCATaGTGGACACCACACAGCCTG +
Preference number: 4 (lower is better)
Translates to: SFDSAGAALTCQRGSLEAVSFCP*WTPHSL
Trigger: CAGGCTGTGTGGTGTCCATCATGGGCAGAAGGAGAC...AGCTTCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp AGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTGAACTACAAAGGTTGACTTaGTCTTGTGAACCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SSLPVALLVPGVAGHERELQRLT*SCEPAC
Trigger: ACAGGCAGGTTCACAAGATCAAGTCAACCTTTGTAG...TTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp GCCGCTCCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTTCCATCTACAAAGGTTaGCTTGATCTTGTGAACCTG +
Preference number: 4 (lower is better)
Translates to: AAPSLLHRPPRTPPSWFASIYKG*LDLVNL
Trigger: CAGGTTCACAAGATCAAGTCAACCTTTGTAGATGGA...AGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGGAGCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp TCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGATCTCTCGAAGCTCAGAGGTGCTGGCTCTaGGCTGTCTTGCACCACGAA +
Preference number: 4 (lower is better)
Translates to: SFDSAGAALTCQRGSLEAQRCWL*AVLHHE
Trigger: TTCGTGGTGCAAGACAGCTCAGAGCCAGCACCTCTG...AGCTTCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp AGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTGAATTGAGCACAAATGTATaGGAGCTGCAGTCTAGCCAT +
Preference number: 4 (lower is better)
Translates to: SSLPVALLVPGVAGHERELSTNV*ELQSSH
Trigger: ATGGCTAGACTGCAGCTCGCATACATTTGTGCTCAA...TTCACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR GCA 90 bp CTGGTGACACTGGGCAATAGCTGCTCGGGCGAAGTCCTTGATTTTCTTGTACTTCCAAGATTGCACCACTaGTCTCCAGTCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: LVTLGNSCSGEVLDFLVLPRLHH*SPVWAT
Trigger: TGTCGCCCAGACTGGAGAGCAGTGGTGCAATCTTGG...AAGTACAAGAAAATCAAGGACTTCGCCCGAGCAGCTATTGCCCAGTGTCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp CTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGATCGGAAGTGAGCCAAGATTaGACCACTGCTCTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LLERCGLWMKQTWPSGRSEVSQD*TTALQS
Trigger: AGACTGGAGAGCAGTGGTGCAATCTTGGCTCACTTC...CGATCTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGTGTCCACAGCCTTGCTaGTTAGGCTGTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWCPQPC*LGCEDS
Trigger: AGAGTCTTCACAGCCTAACCAGCAAGGCTGTGGACA...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTTGTCCACAGCCTTGCTaGTTAGGCTGTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSCPQPC*LGCEDS
Trigger: AGAGTCTTCACAGCCTAACCAGCAAGGCTGTGGACA...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTCACTGCATTCCAGCCTaGAGACAGAGTGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSHCIPA*RQSETL
Trigger: TAGAGTCTCACTCTGTCTCCAGGCTGGAATGCAGTG...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp GAAACGGGGGTCTGGTCAGCTCCTAGCTGGGTGGAACCATCAGTATACATCACATTTACCTGCAGAAACTaGCCGTCAAGGTGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ETGVWSAPSWVEPSVYITFTCRN*PSRCGK
Trigger: CTTCCCACACCTTGACGGCCAGTTTCTGCAGGTAAA...TGTGATGTATACTGATGGTTCCACCCAGCTAGGAGCTGACCAGACCCCCGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGAAGAGGTCAAGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWKRSRD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCTT...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp CACAGTTCCAGTCTGATTCCATGTAGAGGAAATGGAGCCCTTTTTCATGCAAGCAGGGTCACCCAGCTGTaGCACCTAAGCACGCTGACA +
Preference number: 4 (lower is better)
Translates to: HSSSLIPCRGNGALFHASRVTQL*HLSTLT
Trigger: TGTCAGCGTGCTTAGGTGTCACAGCTGGGTGACCCT...GCTTGCATGAAAAAGGGCTCCATTTCCTCTACATGGAATCAGACTGGAACTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp CCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAATTCCGGGCAAATTGTTaGTGTGCCTCCTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PFWGDCSFDSAGAALTCQFRANC*CASCSW
Trigger: CCAAGAACAGGAGGCACATCAACAATTTGCCCGGAA...TTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GCCTCAGGAGGGGACGGGGGCCCGATAAGCAGAGATGGTGATCATCAGAATCACTTACATTTCATTGTTTaGAATAGCACGTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: ASGGDGGPISRDGDHQNHLHFIV*NSTFRA
Trigger: TGCCCGGAACGTGCTATTTCAAACAATGAAATGTAA...GTGATTCTGATGATCACCATCTCTGCTTATCGGGCCCCCGTCCCCTCCTGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp CCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTCTTTACCACTGCTTCTaGTGTAGACGGGTATTTCTG +
Preference number: 4 (lower is better)
Translates to: PSLLHRPPRTPPSWFALCLYHCF*CRRVFL
Trigger: CAGAAATACCCGTCTACATCAGAAGCAGTGGTAAAG...ACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp CTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGATCGCTCGGGCGAAGTCCTTaGTTTTCTTGTACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLERCGLWMKQTWPSGRSLGRSP*FSCTSA
Trigger: TGCAGAAGTACAAGAAAATCAAGGACTTCGCCCGAG...CGATCTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GAAACGGGGGTCTGGTCAGCTCCTAGCTGGGTGGAACCATCAGTATACATCACATTGTTCACAAACTTCTaGGCTCAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: ETGVWSAPSWVEPSVYITLFTNF*AQVIHP
Trigger: CGGGTGGATCACTTGAGCTCAGAAGTTTGTGAACAA...TGTGATGTATACTGATGGTTCCACCCAGCTAGGAGCTGACCAGACCCCCGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp TGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTCTGCGTGCAAATGTATGCGAGCTaGAGTCTAGCCATCTCTAGT +
Preference number: 4 (lower is better)
Translates to: CSIDHRVHHLLGLLSVCVQMYAS*SLAISS
Trigger: ACTAGAGATGGCTAGACTGCAGCTCGCATACATTTG...CACGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CCA 90 bp TCAGGAGGGGACGGGGGCCCGATAAGCAGAGATGGTGATCATCAGAATCACGAGAACCTCAGAGATTTGTaGCTAGTTACTGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: SGGDGGPISRDGDHQNHENLRDL*LVTEAI
Trigger: GATGGCTTCAGTAACTAGCCACAAATCTCTGAGGTT...CTCGTGATTCTGATGATCACCATCTCTGCTTATCGGGCCCCCGTCCCCTCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGGGCTTGCCTGATTTCTaGAGAATGCTAAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWGLPDF*RMLKAS
Trigger: GGAAGCTTTTAGCATTCTTCAGAAATCAGGCAAGCC...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp AGAGGTCAGCAGCGGAGCCTTGCACCACGAAGTTCACTGCCTGTCGCTCTGCTTGCAGATACTGCCAACTaGTCTTGTACTAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: RGQQRSLAPRSSLPVALLADTAN*SCTKEI
Trigger: TATTTCTTTAGTACAAGATCAGTTGGCAGTATCTGC...AAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAAGGCTCCGCTGCTGACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp GCCGCTCCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTGCAGATACTGCCAACTaGTCTTGTACTAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: AAPSLLHRPPRTPPSWFAADTAN*SCTKEI
Trigger: TATTTCTTTAGTACAAGATCAGTTGGCAGTATCTGC...AGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGGAGCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTGGAAGCTCATGCCTGTaGTCCCTGCACTTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIGSSCL*SLHFGR
Trigger: TCTACCAAAGTGCAGGGATCACAGGCATGAGCTTCC...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp AACATGGCCCTCGGGGAGATCGTGAGAATCTTGTCTTCTTTACCACTGCTTCTGAACTGGGCAGCTTCCTaGATAGGAACTCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: NMALGEIVRILSSLPLLLNWAAS*IGTPRQ
Trigger: TTGCCTTGGAGTTCCTATTCAGGAAGCTGCCCAGTT...CAGAAGCAGTGGTAAAGAAGACAAGATTCTCACGATCTCCCCGAGGGCCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp GTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGGTCACAGTTCCAGTCTaGTTCCATGTAGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: VFLQPRSGETVPLTQQVQVTVPV*FHVEEM
Trigger: CATTTCCTCTACATGGAATCAGACTGGAACTGTGAC...CTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTCAAATGTATGCGAGCTaGAGTCTAGCCATCTCTAGT +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSQMYAS*SLAISS
Trigger: ACTAGAGATGGCTAGACTGCAGCTCGCATACATTTG...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR GCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTTTGAGCACAAATGTATaGGAGCTGCAGTCTAGCCAT +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSLSTNV*ELQSSH
Trigger: ATGGCTAGACTGCAGCTCGCATACATTTGTGCTCAA...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR GCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGTTGAGCACAAATGTATaGGAGCTGCAGTCTAGCCAT +
Preference number: 4 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWLSTNV*ELQSSH
Trigger: ATGGCTAGACTGCAGCTCGCATACATTTGTGCTCAA...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR GCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGAAAGAGGCACCTGGGTaGAGACGGGGATCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PHIIAARGISLFLPVFEGKEAPG*RRGSRP
Trigger: TGGCCGCGATCCCCGTCTGCACCCAGGTGCCTCTTT...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTGTAATGCCAGCACTATaGAAGGCCAAGGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIVMPAL*KAKAGR
Trigger: TCTACCCGCCTTGGCCTTCCATAGTGCTGGCATTAC...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATAGCTGCTGGAGCACCTaGAAGGAGCCCCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYSCWST*KEPPGA
Trigger: CGCTCCTGGGGGCTCCTTCCAGGTGCTCCAGCAGCT...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR TCA 90 bp CCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAGGCTTGCCTGATTTCTaGAGAATGCTAAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PFWGDCSFDSAGAALTCQGLPDF*RMLKAS
Trigger: GGAAGCTTTTAGCATTCTTCAGAAATCAGGCAAGCC...TTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTGCAGACATAATCTTCTaGGCAACACTGGAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIADIIF*ATLESG
Trigger: ACCGCTCTCCAGTGTTGCTCAGAAGATTATGTCTGC...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp TCAGGAGGGGACGGGGGCCCGATAAGCAGAGATGGTGATCATCAGAATCACGAGGTCTTCAAGTTGTACTaGATACTTAACACTGGACTT +
Preference number: 4 (lower is better)
Translates to: SGGDGGPISRDGDHQNHEVFKLY*ILNTGL
Trigger: AAGTCCAGTGTTAAGTATTCAGTACAACTTGAAGAC...CTCGTGATTCTGATGATCACCATCTCTGCTTATCGGGCCCCCGTCCCCTCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR TCA 90 bp TGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTCTGCGTGTTACATTTCATTGTTTaGAATAGCACGTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: CSIDHRVHHLLGLLSVCVLHFIV*NSTFRA
Trigger: TGCCCGGAACGTGCTATTTCAAACAATGAAATGTAA...CACGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp TGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGACTCGGGCGAAGTCCTTaGTTTTCTTGTACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: WGDCSFDSAGAALTCQRGLGRSP*FSCTSA
Trigger: TGCAGAAGTACAAGAAAATCAAGGACTTCGCCCGAG...TCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp TCCATCACTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCCCCACTTCAGCCTCCTaGGTAGCTGGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: SITAKIGIRGSSKVRNSCPTSAS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAGGAGGCTGAAGTGGG...GCAACTATTTCGTACTTTGGAGCTTCCTCTGATACCAATTTTGGCAGTGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp TCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGATCTCTCGAAGCTTGGGGGATGACTGTTTaGGCAGGCGTAGTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: SFDSAGAALTCQRGSLEAWGMTV*AGVVSK
Trigger: TTTTGACACTACGCCTGCGCAAACAGTCATCCCCCA...AGCTTCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTAACCTCAGAGATTTGTaGCTAGTTACTGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSNLRDL*LVTEAI
Trigger: GATGGCTTCAGTAACTAGCCACAAATCTCTGAGGTT...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp GCCGCTCCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCATCCTTATTCCGTTTaGACAGAAAGAAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: AAPSLLHRPPRTPPSWFAHPYSV*TERKNV
Trigger: AACATTCTTTCTTTCTGTCCAAACGGAATAAGGATG...AGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGGAGCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTCACTGCATTCCAGCCTaGAGACAGAGTGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIHCIPA*RQSETL
Trigger: TAGAGTCTCACTCTGTCTCCAGGCTGGAATGCAGTG...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGAAGTCAAGGTTTGGGTaGGGACAGTATAAATCAAGC +
Preference number: 4 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWKSRFG*GQYKSS
Trigger: GCTTGATTTATACTGTCCCCACCCAAACCTTGACTT...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp TTCCTGTCTTCAAGTTGTACTGAATACTTAACACTGGACTTGTTTATCACTTCCGGCGAGGCTGGACTATaGGGTGGAGCTGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: FLSSSCTEYLTLDLFITSGEAGL*GGAEQA
Trigger: CGCCTGCTCAGCTCCACCCCATAGTCCAGCCTCGCC...GGAAGTGATAAACAAGTCCAGTGTTAAGTATTCAGTACAACTTGAAGACAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp CCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTTTTGTGGCTAGTTACTaGAGCCATCAATTGACATTT +
Preference number: 4 (lower is better)
Translates to: PSLLHRPPRTPPSWFALCFVASY*SHQLTF
Trigger: AAATGTCAATTGATGGCTTCAGTAACTAGCCACAAA...ACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACATTGCTGGTTAGGCTGTaGAGACTCTCCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTLLVRL*RLSSAH
Trigger: ATGGGCAGAGGAGAGTCTTCACAGCCTAACCAGCAA...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTCAGCAGAATTTTATTTaGCAGTCAAACATGAGGGGA +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSQQNFI*QSNMRG
Trigger: TCCCCTCATGTTTGACTGTCAAATAAAATTCTGCTG...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTTCTTGTAGAAACTTTTaGGTCCCCAGAATTCAGACT +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSSCRNF*VPRIQT
Trigger: AGTCTGAATTCTGGGGACTCAAAAGTTTCTACAAGA...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGACAGGTTTGATGACCTaGGAACCAAGATTAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWTGLMT*EPRLKH
Trigger: ATGCTTTAATCTTGGTTCTCAGGTCATCAAACCTGT...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTACAGGTTTGATGACCTaGGAACCAAGATTAAAGCAT +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSTGLMT*EPRLKH
Trigger: ATGCTTTAATCTTGGTTCTCAGGTCATCAAACCTGT...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp AGACGGGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGAAAGAGTCAATGAGCTaGTGCTCTTCTGTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: RRVFLQPRSGETVPLTQQKESMS*CSSVFG
Trigger: ACCAAAAACAGAAGAGCATCAGCTCATTGACTCTTT...CTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACCCGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp TCTGCTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGTTAGGTGTAGTAATCTaGATTGGGTGCTTGGAGATA +
Preference number: 4 (lower is better)
Translates to: SAARKVWPLDETNMALGELGVVI*IGCLEI
Trigger: TATCTCCAAGCACCCAATTCAGATTACTACACCTAA...CTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CCA 90 bp CCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAACCTCAGAGATTTGTaGCTAGTTACTGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: PFWGDCSFDSAGAALTCQNLRDL*LVTEAI
Trigger: GATGGCTTCAGTAACTAGCCACAAATCTCTGAGGTT...TTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CCA 90 bp GGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGGCATATTCAATAACTaGGCATTCTCTCTTACCACA +
Preference number: 4 (lower is better)
Translates to: GISATPFWGDCSFDSAGAGIFNN*AFSLTT
Trigger: TGTGGTAAGAGAGAATGCCCAGTTATTGAATATGCC...TGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATGCAAGCCCCGCCTCCTaGGTTCATGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYASPAS*VHAILL
Trigger: CAGGAGAATGGCATGAACCCAGGAGGCGGGGCTTGC...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR TCA 90 bp AGACGGGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGTTTGTGGCTAGTTACTaGAGCCATCAATTGACATTT +
Preference number: 4 (lower is better)
Translates to: RRVFLQPRSGETVPLTQQFVASY*SHQLTF
Trigger: AAATGTCAATTGATGGCTTCAGTAACTAGCCACAAA...CTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACCCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGTCATCAGTAAGAGCCTaGAGTTCATTACTGATCTTA +
Preference number: 4 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWSSVRA*SSLLIL
Trigger: TAAGATCAGTAATGAACTTCAGGCTCTTACTGATGA...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp AGACGGGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGTCATCAGTAAGAGCCTaGAGTTCATTACTGATCTTA +
Preference number: 4 (lower is better)
Translates to: RRVFLQPRSGETVPLTQQSSVRA*SSLLIL
Trigger: TAAGATCAGTAATGAACTTCAGGCTCTTACTGATGA...CTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACCCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTGCAGATACTGCCAACTaGTCTTGTACTAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: EAQSALNECKRGGSWASSADTAN*SCTKEI
Trigger: TATTTCTTTAGTACAAGATCAGTTGGCAGTATCTGC...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGGCAGATACTGCCAACTaGTCTTGTACTAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWADTAN*SCTKEI
Trigger: TATTTCTTTAGTACAAGATCAGTTGGCAGTATCTGC...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTATTCAGACTCTAAAATaGATGCAGGCAGGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIIQTLK*MQAGQG
Trigger: TCCTTGGCCTGCCTGCATTCATTTTAGAGTCTGAAT...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATAGGGTCACCCAGCTGTaGCACCTAAGCACGCTGACA +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYRVTQL*HLSTLT
Trigger: TGTCAGCGTGCTTAGGTGTCACAGCTGGGTGACCCT...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR TCA 90 bp ATCACTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCCATCTGGGAGACGGAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: ITAKIGIRGSSKVRNSCHLGDGG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTTCAACCTCCGTCTCCCAG...ATGGCAACTATTTCGTACTTTGGAGCTTCCTCTGATACCAATTTTGGCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTCAAATGTATGCGAGCTaGAGTCTAGCCATCTCTAGT +
Preference number: 4 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIQMYAS*SLAISS
Trigger: ACTAGAGATGGCTAGACTGCAGCTCGCATACATTTG...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR GCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACACGCACCCGGCCCCACTaGTTTTACTATTATACCACA +
Preference number: 4 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTRTRPH*FYYYTT
Trigger: TGTGGTATAATAGTAAAAGCAGTGGGGCCGGGTGCG...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTCCTACAAAGCTCACATaGTATTTACCACAGGCCATG +
Preference number: 4 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIPTKLT*YLPQAM
Trigger: CATGGCCTGTGGTAAATACCATGTGAGCTTTGTAGG...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATAGCAAGCCCCGCCTCCTaGGTTCATGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIASPAS*VHAILL
Trigger: CAGGAGAATGGCATGAACCCAGGAGGCGGGGCTTGC...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGCTGGACTCGAACTCCTaGGCTCAAGTGATCGTCCCA +
Preference number: 4 (lower is better)
Translates to: PHIIAARGISLFLPVFEGLDSNS*AQVIVP
Trigger: TGGGACGATCACTTGAGCCCAGGAGTTCGAGTCCAG...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR TCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGTTGCTGGTTAGGCTGTaGAGACTCTCCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PHIIAARGISLFLPVFEGLLVRL*RLSSAH
Trigger: ATGGGCAGAGGAGAGTCTTCACAGCCTAACCAGCAA...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR TCA 90 bp TCACTAGGATCTATAAGCCATGCAGCAATTCTGGGATCTAGCCCTATAAAATCATTGCTGGTTAGGCTGTaGAGACTCTCCTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: SLGSISHAAILGSSPIKSLLVRL*RLSSAH
Trigger: ATGGGCAGAGGAGAGTCTTCACAGCCTAACCAGCAA...TGATTTTATAGGGCTAGATCCCAGAATTGCTGCATGGCTTATAGATCCTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGTCTTGTTTAGCAATCTaGAGATCAAAATCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWSCLAI*RSKSPF
Trigger: AAAGGGAGATTTTGATCTGCAGATTGCTAAACAAGA...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR GCA 90 bp TCTGCTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGTCTTGTTTAGCAATCTaGAGATCAAAATCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SAARKVWPLDETNMALGESCLAI*RSKSPF
Trigger: AAAGGGAGATTTTGATCTGCAGATTGCTAAACAAGA...CTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR GCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATACTGGGAGGCGGAGGTTaGAGTGAGCCGAGATCATTC +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVILGGGG*SEPRSF
Trigger: GAATGATCTCGGCTCACTGCAACCTCCGCCTCCCAG...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR GCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACACAAAAATTAGCCAGGTaGAGTGGTGCACGCCTACAA +
Preference number: 4 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTQKLAR*SGARLQ
Trigger: TTGTAGGCGTGCACCACTGCACCTGGCTAATTTTTG...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAACCTCAGAGATTTGTaGCTAGTTACTGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: ECRQAKEVLILCGTSRDINLRDL*LVTEAI
Trigger: GATGGCTTCAGTAACTAGCCACAAATCTCTGAGGTT...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATAGTAATTCCGGCACTTTaGGAGGCCGGGAGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIVIPAL*EAGRGD
Trigger: ATCCCCTCTCCCGGCCTCCCAAAGTGCCGGAATTAC...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR CAA 72 bp TATAAGAAACCGTTCTCCTGCAACAAAATGAGCTTCTaGCTCCAATTCCTTGAGACGAGCCCCAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: YKKPFSCNKMSF*LQFLETSPKKC
Trigger: GCACTTCTTGGGGCTCGTCTCAAGGAATTGGAGCAAGAAGCTCATTTTGTTGCAGGAGAACGGTTTCTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACAATTCAGACTCTAAAATaGATGCAGGCAGGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTIQTLK*MQAGQG
Trigger: TCCTTGGCCTGCCTGCATTCATTTTAGAGTCTGAAT...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp GAAAATACATCATCTCTTTCAGATTCCTGGAATAACTTCAGAAGTTCCGGATCTTGGTCAGCAGACAGCTaGTCTGTGAGCCTGACACTG +
Preference number: 4 (lower is better)
Translates to: ENTSSLSDSWNNFRSSGSWSADS*SVSLTL
Trigger: CAGTGTCAGGCTCACAGATCAGCTGTCTGCTGACCA...AGATCCGGAACTTCTGAAGTTATTCCAGGAATCTGAAAGAGATGATGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp ATCACTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCCATCCCTCGGGGAGATCGTaGGAATCTTGTCTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: ITAKIGIRGSSKVRNSCHPSGRS*ESCLLY
Trigger: GTAAAGAAGACAAGATTCTCACGATCTCCCCGAGGG...ATGGCAACTATTTCGTACTTTGGAGCTTCCTCTGATACCAATTTTGGCAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATACACAACTACCATCCGTaGCTTGATCTGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIHNYHP*LDLPCW
Trigger: CCAGCAGGGCAGATCAAGGCACGGATGGTAGTTGTG...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR GCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGTTCATGCCATTCTCCTaGCTCAGCCACTTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: PHIIAARGISLFLPVFEGFMPFS*LSHFLK
Trigger: CTTGAGGAAGTGGCTGAGGCAGGAGAATGGCATGAA...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGTGTCCACAGCCTTGCTaGTTAGGCTGTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: PHIIAARGISLFLPVFEGCPQPC*LGCEDS
Trigger: AGAGTCTTCACAGCCTAACCAGCAAGGCTGTGGACA...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTGGCATATTCAATAACTaGGCATTCTCTCTTACCACA +
Preference number: 4 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIGIFNN*AFSLTT
Trigger: TGTGGTAAGAGAGAATGCCCAGTTATTGAATATGCC...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp TCCATCACTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCGGCTTGCCTGATTTCTaGAGAATGCTAAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SITAKIGIRGSSKVRNSCGLPDF*RMLKAS
Trigger: GGAAGCTTTTAGCATTCTTCAGAAATCAGGCAAGCC...GCAACTATTTCGTACTTTGGAGCTTCCTCTGATACCAATTTTGGCAGTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp ATCACTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCCATTCCTCTTTGTTCACCTaGATGGCATGGCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: ITAKIGIRGSSKVRNSCHSSLFT*MAWLSI
Trigger: GATGGAAAGCCATGCCATTCAGGTGAACAAAGAGGA...ATGGCAACTATTTCGTACTTTGGAGCTTCCTCTGATACCAATTTTGGCAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp TCCATCACTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCTTGAGCACAAATGTATaGGAGCTGCAGTCTAGCCAT +
Preference number: 4 (lower is better)
Translates to: SITAKIGIRGSSKVRNSCLSTNV*ELQSSH
Trigger: ATGGCTAGACTGCAGCTCGCATACATTTGTGCTCAA...GCAACTATTTCGTACTTTGGAGCTTCCTCTGATACCAATTTTGGCAGTGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATACCAGAAGGCAGAGGTTaGAGTGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIPEGRG*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAACCTCTGCCTTCTGG...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR GCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGATCTTGCTATGTTaGCTAGGCTGGACTCGAACT +
Preference number: 4 (lower is better)
Translates to: PHIIAARGISLFLPVFEGEILLC*LGWTRT
Trigger: AGTTCGAGTCCAGCCTAGGCAACATAGCAAGATCTC...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CCA 90 bp CTGGTGACACTGGGCAATAGCTGCTCGGGCGAAGTCCTTGATTTTCTTGTACTTCATCCTTATTCCGTTTaGACAGAAAGAAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: LVTLGNSCSGEVLDFLVLHPYSV*TERKNV
Trigger: AACATTCTTTCTTTCTGTCCAAACGGAATAAGGATG...AAGTACAAGAAAATCAAGGACTTCGCCCGAGCAGCTATTGCCCAGTGTCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR TCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGGCTTGCCTGATTTCTaGAGAATGCTAAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PHIIAARGISLFLPVFEGGLPDF*RMLKAS
Trigger: GGAAGCTTTTAGCATTCTTCAGAAATCAGGCAAGCC...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR TCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACACAGCAGAATTTTATTTaGCAGTCAAACATGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTQQNFI*QSNMRG
Trigger: TCCCCTCATGTTTGACTGTCAAATAAAATTCTGCTG...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATAAAGCTCAGTCTGCACTaGATGAGTGTAAAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIKLSLH*MSVKGA
Trigger: CGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTT...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp TCAGAGGAAGCTCCAAAGTACGAAATAGTTGCCATAAACCATAATCCACAATATAACTGGGCAGCTTCCTaGATAGGAACTCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SEEAPKYEIVAINHNPQYNWAAS*IGTPRQ
Trigger: TTGCCTTGGAGTTCCTATTCAGGAAGCTGCCCAGTT...ATATTGTGGATTATGGTTTATGGCAACTATTTCGTACTTTGGAGCTTCCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp TCACTAGGATCTATAAGCCATGCAGCAATTCTGGGATCTAGCCCTATAAAATCAATTAGGATGCTTGGCTaGAAGTCTTCCAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: SLGSISHAAILGSSPIKSIRMLG*KSSSHS
Trigger: ACTGTGACTGGAAGACTTTCAGCCAAGCATCCTAAT...TGATTTTATAGGGCTAGATCCCAGAATTGCTGCATGGCTTATAGATCCTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATACGCACCCGGCCCCACTaGTTTTACTATTATACCACA +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIRTRPH*FYYYTT
Trigger: TGTGGTATAATAGTAAAAGCAGTGGGGCCGGGTGCG...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp TTCCTGTCTTCAAGTTGTACTGAATACTTAACACTGGACTTGTTTATCACTTCCTGTCCACAGCCTTGCTaGTTAGGCTGTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: FLSSSCTEYLTLDLFITSCPQPC*LGCEDS
Trigger: AGAGTCTTCACAGCCTAACCAGCAAGGCTGTGGACA...GGAAGTGATAAACAAGTCCAGTGTTAAGTATTCAGTACAACTTGAAGACAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CCA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTCATCCTTATTCCGTTTaGACAGAAAGAAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIHPYSV*TERKNV
Trigger: AACATTCTTTCTTTCTGTCCAAACGGAATAAGGATG...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACATTTGTGGCTAGTTACTaGAGCCATCAATTGACATTT +
Preference number: 4 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTFVASY*SHQLTF
Trigger: AAATGTCAATTGATGGCTTCAGTAACTAGCCACAAA...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACATCATCAGTAAGAGCCTaGAGTTCATTACTGATCTTA +
Preference number: 4 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTSSVRA*SSLLIL
Trigger: TAAGATCAGTAATGAACTTCAGGCTCTTACTGATGA...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATAAAGAGGTCAAGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIKRSRD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCTT...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR GCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATCAAATGTATGCGAGCTaGAGTCTAGCCATCTCTAGT +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYQMYAS*SLAISS
Trigger: ACTAGAGATGGCTAGACTGCAGCTCGCATACATTTG...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR GCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATTTGAGCACAAATGTATaGGAGCTGCAGTCTAGCCAT +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYLSTNV*ELQSSH
Trigger: ATGGCTAGACTGCAGCTCGCATACATTTGTGCTCAA...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR GCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATACAAAAATTAGCCAGGTaGAGTGGTGCACGCCTACAA +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIQKLAR*SGARLQ
Trigger: TTGTAGGCGTGCACCACTGCACCTGGCTAATTTTTG...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACAAAACATGAGGGGACTTaGCTATTTCACATATTAAGG +
Preference number: 4 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTKHEGT*LFHILR
Trigger: CCTTAATATGTGAAATAGCCAAGTCCCCTCATGTTT...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATATATAAATCAAGCATCTaGGCAGGGGCATGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIYKSSI*AGAWWL
Trigger: AAGCCACCATGCCCCTGCCCAGATGCTTGATTTATA...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATAGGCTTGCCTGATTTCTaGAGAATGCTAAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIGLPDF*RMLKAS
Trigger: GGAAGCTTTTAGCATTCTTCAGAAATCAGGCAAGCC...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp AATAACTTCAGAAGTTCCGGATCTCCAGATAAATGTGTAAGAATGCGCAATTCAATCTTGGGTAATGGATaGAGGTCTCGCAGAGCATTT +
Preference number: 4 (lower is better)
Translates to: NNFRSSGSPDKCVRMRNSILGNG*RSRRAF
Trigger: AAATGCTCTGCGAGACCTTCATCCATTACCCAAGAT...TGAATTGCGCATTCTTACACATTTATCTGGAGATCCGGAACTTCTGAAGTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACATCTTGTTTAGCAATCTaGAGATCAAAATCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTSCLAI*RSKSPF
Trigger: AAAGGGAGATTTTGATCTGCAGATTGCTAAACAAGA...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATAACCTCAGAGATTTGTaGCTAGTTACTGAAGCCATC +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYNLRDL*LVTEAI
Trigger: GATGGCTTCAGTAACTAGCCACAAATCTCTGAGGTT...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CCA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACACATCCTTATTCCGTTTaGACAGAAAGAAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTHPYSV*TERKNV
Trigger: AACATTCTTTCTTTCTGTCCAAACGGAATAAGGATG...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
3UTR CAA 72 bp TTTAACTTGCCAAAGAGGATCTCTCGAAGCTGGTTATaGCTCGTTATAAGAAACCGTTCTCCTGCAACAAAA +
Preference number: 4 (lower is better)
Translates to: FNLPKRISRSWL*LVIRNRSPATK
Trigger: TTTTGTTGCAGGAGAACGGTTTCTTATAACGAGCAATAACCAGCTTCGAGAGATCCTCTTTGGCAAGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR TCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGTTTGTGGCTAGTTACTaGAGCCATCAATTGACATTT +
Preference number: 4 (lower is better)
Translates to: PHIIAARGISLFLPVFEGFVASY*SHQLTF
Trigger: AAATGTCAATTGATGGCTTCAGTAACTAGCCACAAA...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR TCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATATTCTTACCGGTTTTTaGAGGGGAGTATATTTCCAC +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYILTGF*RGVYFH
Trigger: GTGGAAATATACTCCCCTTCAAAAACCGGTAAGAAT...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR GCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGCACCTCTGTCAAGTATaGACCCTCTATTATTCAAAA +
Preference number: 4 (lower is better)
Translates to: PHIIAARGISLFLPVFEGHLCQV*TLYYSK
Trigger: TTTTGAATAATAGAGGGTGCATACTTGACAGAGGTG...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR GCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGCCTCATATTATAGCTaGCAGAGGCATTTCATTATT +
Preference number: 4 (lower is better)
Translates to: PHIIAARGISLFLPVFEGASYYS*QRHFII
Trigger: AATAATGAAATGCCTCTGGCAGCTATAATATGAGGC...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATGGCATATTCAATAACTaGGCATTCTCTCTTACCACA +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYGIFNN*AFSLTT
Trigger: TGTGGTAAGAGAGAATGCCCAGTTATTGAATATGCC...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
3UTR CAA 72 bp ATAAACCTACCTAGTAACACAACGATTATAAGTAACTaGGGTAATTACGGCAGACACACAACTACCATCCGT +
Preference number: 4 (lower is better)
Translates to: INLPSNTTIISN*GNYGRHTTTIR
Trigger: ACGGATGGTAGTTGTGTGTCTGCCGTAATTACCCAAGTTACTTATAATCGTTGTGTTACTAGGTAGGTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATTCATCAGTAAGAGCCTaGAGTTCATTACTGATCTTA +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYSSVRA*SSLLIL
Trigger: TAAGATCAGTAATGAACTTCAGGCTCTTACTGATGA...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATAGGCATATTCAATAACTaGGCATTCTCTCTTACCACA +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIGIFNN*AFSLTT
Trigger: TGTGGTAAGAGAGAATGCCCAGTTATTGAATATGCC...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CCA 90 bp AATAACTTCAGAAGTTCCGGATCTCCAGATAAATGTGTAAGAATGCGCAATTCAGGCATATTCAATAACTaGGCATTCTCTCTTACCACA +
Preference number: 4 (lower is better)
Translates to: NNFRSSGSPDKCVRMRNSGIFNN*AFSLTT
Trigger: TGTGGTAAGAGAGAATGCCCAGTTATTGAATATGCC...TGAATTGCGCATTCTTACACATTTATCTGGAGATCCGGAACTTCTGAAGTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CCA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGATGCCTCAATATGAATaGATCAAAACGTTAAGTGCA +
Preference number: 4 (lower is better)
Translates to: PHIIAARGISLFLPVFEGMPQYE*IKTLSA
Trigger: TGCACTTAACGTTTTGATCCATTCATATTGAGGCAT...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR TCA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATATTTGTGGCTAGTTACTaGAGCCATCAATTGACATTT +
Preference number: 4 (lower is better)
Translates to: YLPQAMYKLGTQEASDVIFVASY*SHQLTF
Trigger: AAATGTCAATTGATGGCTTCAGTAACTAGCCACAAA...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR TCA 90 bp TTCCTGTCTTCAAGTTGTACTGAATACTTAACACTGGACTTGTTTATCACTTCCGTCTTCAAGTTGTACTaGATACTTAACACTGGACTT +
Preference number: 4 (lower is better)
Translates to: FLSSSCTEYLTLDLFITSVFKLY*ILNTGL
Trigger: AAGTCCAGTGTTAAGTATTCAGTACAACTTGAAGAC...GGAAGTGATAAACAAGTCCAGTGTTAAGTATTCAGTACAACTTGAAGACAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR GCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATTCTTGTTTAGCAATCTaGAGATCAAAATCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYSCLAI*RSKSPF
Trigger: AAAGGGAGATTTTGATCTGCAGATTGCTAAACAAGA...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CCA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATAGAGCTTATATGAGATaGACTGACTGTCGTAAATTT +
Preference number: 4 (lower is better)
Translates to: IIAARGISLFLPVFEGEYRAYMR*TDCRKF
Trigger: AAATTTACGACAGTCAGTCCATCTCATATAAGCTCT...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR GCA 90 bp TTCCTGTCTTCAAGTTGTACTGAATACTTAACACTGGACTTGTTTATCACTTCCTCTTGTTTAGCAATCTaGAGATCAAAATCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: FLSSSCTEYLTLDLFITSSCLAI*RSKSPF
Trigger: AAAGGGAGATTTTGATCTGCAGATTGCTAAACAAGA...GGAAGTGATAAACAAGTCCAGTGTTAAGTATTCAGTACAACTTGAAGACAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
3UTR CAA 72 bp ATACTAAAATACCTGATCCAGATTCTAAGGGAATGTTaGACAGAAATACCTGGAATAAGGAAGAGAGTGTTA +
Preference number: 4 (lower is better)
Translates to: ILKYLIQILREC*TEIPGIRKRVL
Trigger: TAACACTCTCTTCCTTATTCCAGGTATTTCTGTCAAACATTCCCTTAGAATCTGGATCAGGTATTTTAGTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS GCA 90 bp CAGGAGCCCGCCGCCACCGCCCTCCGTGCCCCGCGCGCCTCGCACTaGCTCACGGGAGCGCCTGGACGCGCGCAAGCGCACAAGGCGACG +
Preference number: 5 (lower is better)
Translates to: QEPAATALRAPRASH*LTGAPGRAQAHKAT
Trigger: CGTCGCCTTGTGCGCTTGCGCGCGTCCAGGCGCTCCCGTGAGGCAGTGCGAGGCGCGCGGGGCACGGAGGGCGGTGGCGGCGGGCTCCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS CCA 90 bp CGCCCTCCGTGCCCCGCGCGCCTCGCACTGCCTCACGGGAGCGCCTaGACGCGCGCAAGCGCACAAGGCGACGGCGTGGTCGTGGGGGAT +
Preference number: 5 (lower is better)
Translates to: RPPCPARLALPHGSA*TRASAQGDGVVVGD
Trigger: ATCCCCCACGACCACGCCGTCGCCTTGTGCGCTTGCGCGCGTCCAGGCGCTCCCGTGAGGCAGTGCGAGGCGCGCGGGGCACGGAGGGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS GCA 90 bp AAGTTCCGCTTGCTTCTCGCAGGAGCCCGCCGCCACCGCCCTCCGTaGCCCGCGCGCCTCGCACTGCCTCACGGGAGCGCCTGGACGCGC +
Preference number: 5 (lower is better)
Translates to: KFRLLLAGARRHRPP*PARLALPHGSAWTR
Trigger: GCGCGTCCAGGCGCTCCCGTGAGGCAGTGCGAGGCGCGCGGGGCACGGAGGGCGGTGGCGGCGGGCTCCTGCGAGAAGCAAGCGGAACTT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS GCA 90 bp CGCCCAGAACCGAGGCCCGCGTCAGTCACCTCAGGAAGTTCCGCTTaGTTCTCGCAGGAGCCCGCCGCCACCGCCCTCCGTGCCCCGCGC +
Preference number: 5 (lower is better)
Translates to: RPEPRPASVTSGSSA*FSQEPAATALRAPR
Trigger: GCGCGGGGCACGGAGGGCGGTGGCGGCGGGCTCCTGCGAGAAGCAAGCGGAACTTCCTGAGGTGACTGACGCGGGCCTCGGTTCTGGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506763.5
ENST00000672725.1
ENST00000672739.1
CDS GCA 90 bp GCGCAAGCGCACAAGGCGACGGCGTGGTCGTGGGGGATGACTGTTTaGGCAGGCGTAGTGTCAAAAGAGGCGGAGTCGGCGAGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: AQAHKATAWSWGMTV*AGVVSKEAESARLD
Trigger: GTCCAGCCTCGCCGACTCCGCCTCTTTTGACACTACGCCTGCGCAAACAGTCATCCCCCACGACCACGCCGTCGCCTTGTGCGCTTGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS CCA 90 bp CTCACGGGAGCGCCTGGACGCGCGCAAGCGCACAAGGCGACGGCGTaGTCGTGGGGGATGACTGTTTGCGCAGGCGTAGTGTCAAAAGAG +
Preference number: 5 (lower is better)
Translates to: LTGAPGRAQAHKATA*SWGMTVCAGVVSKE
Trigger: CTCTTTTGACACTACGCCTGCGCAAACAGTCATCCCCCACGACCACGCCGTCGCCTTGTGCGCTTGCGCGCGTCCAGGCGCTCCCGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp CGAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTCTCAGGAAGTTCCGCTaGCTTCTCGCAGGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: RSSLPVALLVPGVAGHERLRKFR*LLAGAR
Trigger: GCGGGCTCCTGCGAGAAGCAAGCGGAACTTCCTGAG...ACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp GCCGCTCCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTTGCCTGTCGCTCTGCTaGTGCCCGGAGTTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: AAPSLLHRPPRTPPSWFACLSLC*CPELLV
Trigger: GACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCA...AGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGGAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp GAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTGTGCCTGTCGCTCTGCTaGTGCCCGGAGTTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: EVHCLSLCLCPELLVMSVCLSLC*CPELLV
Trigger: GACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCA...CACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp GCCTCAGGAGGGGACGGGGGCCCGATAAGCAGAGATGGTGATCATCAGAATCACCATGAGCGTGAATCCTaGGCAGGGGTCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: ASGGDGGPISRDGDHQNHHERES*AGVSFC
Trigger: GCAGAAGGAGACCCCTGCCAAGGATTCACGCTCATG...GTGATTCTGATGATCACCATCTCTGCTTATCGGGCCCCCGTCCCCTCCTGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CAA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGCTCAGGAAGTTCCGCTaGCTTCTCGCAGGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWLRKFR*LLAGAR
Trigger: GCGGGCTCCTGCGAGAAGCAAGCGGAACTTCCTGAG...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGACTACCATCCGTGCCTaGATCTGCCCTGCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWTTIRA*ICPAGP
Trigger: GGGGCCAGCAGGGCAGATCAAGGCACGGATGGTAGT...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTACTACCATCCGTGCCTaGATCTGCCCTGCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: EAQSALNECKRGGSWASSTTIRA*ICPAGP
Trigger: GGGGCCAGCAGGGCAGATCAAGGCACGGATGGTAGT...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp AGACGGGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTCAGCAGCGGAGCCTaGCACCACGAAGTTCACTGC +
Preference number: 5 (lower is better)
Translates to: RRVFLQPRSGETVPLTQQVSSGA*HHEVHC
Trigger: GCAGTGAACTTCGTGGTGCAAGGCTCCGCTGCTGAC...CTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACCCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CAA 90 bp GGGGTCTGGTCAGCTCCTAGCTGGGTGGAACCATCAGTATACATCACAGTTATCGCGCGTGGTACTGTCTaGAGGTCCCATGGCACACGG +
Preference number: 5 (lower is better)
Translates to: GVWSAPSWVEPSVYITVIARGTV*RSHGTR
Trigger: CCGTGTGCCATGGGACCTCAAGACAGTACCACGCGC...GATAACTGTGATGTATACTGATGGTTCCACCCAGCTAGGAGCTGACCAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp TCACGAGCCCCGAGGGGGTCTTCCCACAGAATACTAACCCTCCCATCCAAGCCCCAATCAGCTGGCTTTTaGCCCAATCATCCAAATGCC +
Preference number: 5 (lower is better)
Translates to: SRAPRGSSHRILTLPSKPQSAGF*PNHPNA
Trigger: GGCATTTGGATGATTGGGCAAAAAGCCAGCTGATTG...GGGCTTGGATGGGAGGGTTAGTATTCTGTGGGAAGACCCCCTCGGGGCTCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CAA 90 bp CGAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTGTTCCGGGCAAATTGTaGATGTGCCTCCTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RSSLPVALLVPGVAGHERVPGKL*MCLLFL
Trigger: CAAGAACAGGAGGCACATCAACAATTTGCCCGGAAC...ACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp TCTGCTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGCATGAGCGTGAATCCTaGGCAGGGGTCTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SAARKVWPLDETNMALGEHERES*AGVSFC
Trigger: GCAGAAGGAGACCCCTGCCAAGGATTCACGCTCATG...CTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp TCACGAGCCCCGAGGGGGTCTTCCCACAGAATACTAACCCTCCCATCCAAGCCCGCTTGGCAGAACCTCTaGATGTCTGACTTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: SRAPRGSSHRILTLPSKPAWQNL*MSDFLK
Trigger: CTTTAAGAAGTCAGACATCAAGAGGTTCTGCCAAGC...GGGCTTGGATGGGAGGGTTAGTATTCTGTGGGAAGACCCCCTCGGGGCTCGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CAA 90 bp GAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTGAGGTGCAGCTTTAACTaGCCAAAGAGGATCTCTCGA +
Preference number: 5 (lower is better)
Translates to: EVHCLSLCLCPELLVMSVRCSFN*PKRISR
Trigger: TCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCT...CACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp TCTGCTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGGGGGAGACTGTTCCTTaGACTCAGCAGGTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: SAARKVWPLDETNMALGEGETVP*TQQVQL
Trigger: AAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCC...CTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp TCTGCTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGTGCTTGTGCCCGGAGTaGCTGGTCATGAGCGTGAAT +
Preference number: 5 (lower is better)
Translates to: SAARKVWPLDETNMALGECLCPE*LVMSVN
Trigger: ATTCACGCTCATGACCAGCAACTCCGGGCACAAGCA...CTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp GCCGCTCCTTCCCTGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTGTGCTTGGAGATACCTaGGATATTAGGATGCTTGGC +
Preference number: 5 (lower is better)
Translates to: AAPSLLHRPPRTPPSWFAVLGDT*DIRMLG
Trigger: GCCAAGCATCCTAATATCCAAGGTATCTCCAAGCAC...AGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCAGGGAAGGAGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp TGGCTGGTTGTTGTCTGCATGCCTGCTGTGAGTAGCCCCCAGGGCCTTCCATGGGAGATCGTGAGAATCTaGTCTTCTTTACCACTGCTT +
Preference number: 5 (lower is better)
Translates to: WLVVVCMPAVSSPQGLPWEIVRI*SSLPLL
Trigger: AAGCAGTGGTAAAGAAGACAAGATTCTCACGATCTC...CCATGGAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGACAACAACCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CAA 90 bp AACATGGCCCTCGGGGAGATCGTGAGAATCTTGTCTTCTTTACCACTGCTTCTGCTGGTGGATGGCTGGTaGTTGTCTGCATGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: NMALGEIVRILSSLPLLLLVDGW*LSACLL
Trigger: CAGCAGGCATGCAGACAACAACCAGCCATCCACCAG...CAGAAGCAGTGGTAAAGAAGACAAGATTCTCACGATCTCCCCGAGGGCCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CAA 90 bp ATGGCCAGCTTGCAGAGGTCAGCAGCGGAGCCTATGGGGCGCGTGGTACTGTCTACTACCCCAATTTTGTaGTATCTGATATGGGTTTAC +
Preference number: 5 (lower is better)
Translates to: MASLQRSAAEPMGRVVLSTTPIL*YLIWVY
Trigger: GTAAACCCATATCAGATACAACAAAATTGGGGTAGT...AGACAGTACCACGCGCCCCATAGGCTCCGCTGCTGACCTCTGCAAGCTGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp GAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTGTTTAACCTCAGAGATTaGTGGCTAGTTACTGAAGCC +
Preference number: 5 (lower is better)
Translates to: EVHCLSLCLCPELLVMSVFNLRD*WLVTEA
Trigger: GGCTTCAGTAACTAGCCACAAATCTCTGAGGTTAAA...CACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp TGGCTGGTTGTTGTCTGCATGCCTGCTGTGAGTAGCCCCCAGGGCCTTCCATGGCTGCCCATTTTATACTaGACTTCATGCTCGAATTAC +
Preference number: 5 (lower is better)
Translates to: WLVVVCMPAVSSPQGLPWLPILY*TSCSNY
Trigger: GTAATTCGAGCATGAAGTCAAGTATAAAATGGGCAG...CCATGGAAGGCCCTGGGGGCTACTCACAGCAGGCATGCAGACAACAACCAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CAA 90 bp GAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTGAGCAGAGTGCTCTATTaGAATGTAGATGCATGGATC +
Preference number: 5 (lower is better)
Translates to: EVHCLSLCLCPELLVMSVSRVLY*NVDAWI
Trigger: GATCCATGCATCTACATTCAAATAGAGCACTCTGCT...CACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp GTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGGTTCCGGGCAAATTGTaGATGTGCCTCCTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: VFLQPRSGETVPLTQQVQVPGKL*MCLLFL
Trigger: CAAGAACAGGAGGCACATCAACAATTTGCCCGGAAC...CTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp TGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGAGCGTACACCACCTTCTaGGTTTGCTCTCTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: WGDCSFDSAGAALTCQRGAYTTF*VCSLSA
Trigger: CGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGC...TCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp TGGTCAGCTCCTAGCTGGGTGGAACCATCAGTATACATCACAGTTATCACCAGGGCGTACACCACCTTCTaGGTTTGCTCTCTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: WSAPSWVEPSVYITVITRAYTTF*VCSLSA
Trigger: CGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGC...CCTGGTGATAACTGTGATGTATACTGATGGTTCCACCCAGCTAGGAGCTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp AGACGGGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGCTCGGGCGAAGTCCTaGATTTTCTTGTACTTCTGC +
Preference number: 5 (lower is better)
Translates to: RRVFLQPRSGETVPLTQQARAKS*IFLYFC
Trigger: GCAGAAGTACAAGAAAATCAAGGACTTCGCCCGAGC...CTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACCCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp GGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGCTCGGGCGAAGTCCTaGATTTTCTTGTACTTCTGC +
Preference number: 5 (lower is better)
Translates to: GISATPFWGDCSFDSAGAARAKS*IFLYFC
Trigger: GCAGAAGTACAAGAAAATCAAGGACTTCGCCCGAGC...TGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACATGTAATTCCGGCACTTaGGGAGGCCGGGAGAGGGGA +
Preference number: 5 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTCNSGT*GGRERG
Trigger: TCCCCTCTCCCGGCCTCCCAAAGTGCCGGAATTACA...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp TCTGCTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGCAATCAGCTGGCTTTTaGCCCAATCATCCAAATGCC +
Preference number: 5 (lower is better)
Translates to: SAARKVWPLDETNMALGEQSAGF*PNHPNA
Trigger: GGCATTTGGATGATTGGGCAAAAAGCCAGCTGATTG...CTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp TGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGAAGGGCTGCTGCCTGTTaGAGCATTTCAATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: WGDCSFDSAGAALTCQRGRAAAC*SISISW
Trigger: CCAGCTGATTGAAATGCTCAAACAGGCAGCAGCCCT...TCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTGCATCCAAATTTTCTTaGTCCACAGCCTTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: EAQSALNECKRGGSWASSASKFS*STALLV
Trigger: AACCAGCAAGGCTGTGGACAAAGAAAATTTGGATGC...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp CTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGATCGGCATCCAAATTTTCTTaGTCCACAGCCTTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: LLERCGLWMKQTWPSGRSASKFS*STALLV
Trigger: AACCAGCAAGGCTGTGGACAAAGAAAATTTGGATGC...CGATCTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp GTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGGCATCCAAATTTTCTTaGTCCACAGCCTTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: VFLQPRSGETVPLTQQVQASKFS*STALLV
Trigger: AACCAGCAAGGCTGTGGACAAAGAAAATTTGGATGC...CTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp CGAAGTTCACTGCCTGTCGCTCTGCTTGTGCCCGGAGTTGCTGGTCATGAGCGTAACCAAATTTTCAAGTaGACGATATATGTCCCGATG +
Preference number: 5 (lower is better)
Translates to: RSSLPVALLVPGVAGHERNQIFK*TIYVPM
Trigger: CATCGGGACATATATCGTCAACTTGAAAATTTGGTT...ACGCTCATGACCAGCAACTCCGGGCACAAGCAGAGCGACAGGCAGTGAACTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp AGAGGTCAGCAGCGGAGCCTTGCACCACGAAGTTCACTGCCTGTCGCTCTGCTTACATCCTTATTCCGTTaGGACAGAAAGAAAGAATGT +
Preference number: 5 (lower is better)
Translates to: RGQQRSLAPRSSLPVALLTSLFR*DRKKEC
Trigger: ACATTCTTTCTTTCTGTCCAAACGGAATAAGGATGT...AAGCAGAGCGACAGGCAGTGAACTTCGTGGTGCAAGGCTCCGCTGCTGACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CAA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTCAGGCCATGTATAAATaGGGCACTCAAGAAGCATCT +
Preference number: 5 (lower is better)
Translates to: EAQSALNECKRGGSWASSQAMYK*GTQEAS
Trigger: AGATGCTTCTTGAGTGCCCAATTTATACATGGCCTG...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp TCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGATCTCTCGAAGCTCACGTTCCGGGCAAATaGTTGATGTGCCTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: SFDSAGAALTCQRGSLEAHVPGK*LMCLLF
Trigger: GAACAGGAGGCACATCAACAATTTGCCCGGAACGTG...AGCTTCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp CTGGTGACACTGGGCAATAGCTGCTCGGGCGAAGTCCTTGATTTTCTTGTACTTTCTTGCTCCAATTCCTaGAGACGAGCCCCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: LVTLGNSCSGEVLDFLVLSCSNS*RRAPRS
Trigger: ACTTCTTGGGGCTCGTCTCAAGGAATTGGAGCAAGA...AAGTACAAGAAAATCAAGGACTTCGCCCGAGCAGCTATTGCCCAGTGTCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp CACAGTTCCAGTCTGATTCCATGTAGAGGAAATGGAGCCCTTTTTCATGCAAGCTGCTTGTGCCCGGAGTaGCTGGTCATGAGCGTGAAT +
Preference number: 5 (lower is better)
Translates to: HSSSLIPCRGNGALFHASCLCPE*LVMSVN
Trigger: ATTCACGCTCATGACCAGCAACTCCGGGCACAAGCA...GCTTGCATGAAAAAGGGCTCCATTTCCTCTACATGGAATCAGACTGGAACTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp TGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTCTGCGTGACAGGTTTCATTATGTaGCCCAGGCAACACATATGT +
Preference number: 5 (lower is better)
Translates to: CSIDHRVHHLLGLLSVCVTGFIM*PRQHIC
Trigger: ACATATGTGTTGCCTGGGCAACATAATGAAACCTGT...CACGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATCTCAGGAAGTTCCGCTaGCTTCTCGCAGGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: IIAARGISLFLPVFEGEYLRKFR*LLAGAR
Trigger: GCGGGCTCCTGCGAGAAGCAAGCGGAACTTCCTGAG...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CAA 90 bp CACAGTTCCAGTCTGATTCCATGTAGAGGAAATGGAGCCCTTTTTCATGCAAGCAGGGCTGCTGCCTGTTaGAGCATTTCAATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HSSSLIPCRGNGALFHASRAAAC*SISISW
Trigger: CCAGCTGATTGAAATGCTCAAACAGGCAGCAGCCCT...GCTTGCATGAAAAAGGGCTCCATTTCCTCTACATGGAATCAGACTGGAACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp TCTGCTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGAACAAAATGAGCTTCTaGCTCCAATTCCTTGAGACG +
Preference number: 5 (lower is better)
Translates to: SAARKVWPLDETNMALGENKMSF*LQFLET
Trigger: CGTCTCAAGGAATTGGAGCAAGAAGCTCATTTTGTT...CTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp CTGCTAGAAAGGTGTGGCCTTTGGATGAAACAAACATGGCCCTCGGGGAGATCGTCTCGAAGCTGGTTATaGCTCGTTATAAGAAACCGT +
Preference number: 5 (lower is better)
Translates to: LLERCGLWMKQTWPSGRSSRSWL*LVIRNR
Trigger: ACGGTTTCTTATAACGAGCAATAACCAGCTTCGAGA...CGATCTCCCCGAGGGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCTAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp AACATGGCCCTCGGGGAGATCGTGAGAATCTTGTCTTCTTTACCACTGCTTCTGAGAAAGGTGTGGCCTTaGGATGAAACAAACATGGCC +
Preference number: 5 (lower is better)
Translates to: NMALGEIVRILSSLPLLLRKVWP*DETNMA
Trigger: GGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCT...CAGAAGCAGTGGTAAAGAAGACAAGATTCTCACGATCTCCCCGAGGGCCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CAA 90 bp CTGGTGACACTGGGCAATAGCTGCTCGGGCGAAGTCCTTGATTTTCTTGTACTTAGAAAGGTGTGGCCTTaGGATGAAACAAACATGGCC +
Preference number: 5 (lower is better)
Translates to: LVTLGNSCSGEVLDFLVLRKVWP*DETNMA
Trigger: GGCCATGTTTGTTTCATCCAAAGGCCACACCTTTCT...AAGTACAAGAAAATCAAGGACTTCGCCCGAGCAGCTATTGCCCAGTGTCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATACTCAGGAAGTTCCGCTaGCTTCTCGCAGGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: YLPQAMYKLGTQEASDVILRKFR*LLAGAR
Trigger: GCGGGCTCCTGCGAGAAGCAAGCGGAACTTCCTGAG...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp TTCCTGTCTTCAAGTTGTACTGAATACTTAACACTGGACTTGTTTATCACTTCCCTCAGGAAGTTCCGCTaGCTTCTCGCAGGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: FLSSSCTEYLTLDLFITSLRKFR*LLAGAR
Trigger: GCGGGCTCCTGCGAGAAGCAAGCGGAACTTCCTGAG...GGAAGTGATAAACAAGTCCAGTGTTAAGTATTCAGTACAACTTGAAGACAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp AGACGGGTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGCTGCCCATTTTATACTaGACTTCATGCTCGAATTAC +
Preference number: 5 (lower is better)
Translates to: RRVFLQPRSGETVPLTQQLPILY*TSCSNY
Trigger: GTAATTCGAGCATGAAGTCAAGTATAAAATGGGCAG...CTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATACCCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp TGCTCCATAGACCACCGCGTACACCACCTTCTTGGTTTGCTCTCTGTCTGCGTGAACCAAATTTTCAAGTaGACGATATATGTCCCGATG +
Preference number: 5 (lower is better)
Translates to: CSIDHRVHHLLGLLSVCVNQIFK*TIYVPM
Trigger: CATCGGGACATATATCGTCAACTTGAAAATTTGGTT...CACGCAGACAGAGAGCAAACCAAGAAGGTGGTGTACGCGGTGGTCTATGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTACGATTATAAGTAACTaGGGTAATTACGGCAGACAC +
Preference number: 5 (lower is better)
Translates to: EAQSALNECKRGGSWASSTIISN*GNYGRH
Trigger: GTGTCTGCCGTAATTACCCAAGTTACTTATAATCGT...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp TGTTCCACGGGCACATCCTTCCACTGTGAAGTCAGAGTAGAAAATACATCATCTCACGTTCCGGGCAAATaGTTGATGTGCCTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: CSTGTSFHCEVRVENTSSHVPGK*LMCLLF
Trigger: GAACAGGAGGCACATCAACAATTTGCCCGGAACGTG...AGATGATGTATTTTCTACTCTGACTTCACAGTGGAAGGATGTGCCCGTGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CAA 90 bp TCCTTTGACTCAGCAGGTGCAGCTTTAACTTGCCAAAGAGGATCTCTCGAAGCTAGGTGCAGCTTTAACTaGCCAAAGAGGATCTCTCGA +
Preference number: 5 (lower is better)
Translates to: SFDSAGAALTCQRGSLEARCSFN*PKRISR
Trigger: TCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCT...AGCTTCGAGAGATCCTCTTTGGCAAGTTAAAGCTGCACCTGCTGAGTCAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGACTACCCCAATTTTGTaGTATCTGATATGGGTTTAC +
Preference number: 5 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWTTPIL*YLIWVY
Trigger: GTAAACCCATATCAGATACAACAAAATTGGGGTAGT...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp GTATTTCTGCAACCCCGTTCTGGGGAGACTGTTCCTTTGACTCAGCAGGTGCAGACTACCCCAATTTTGTaGTATCTGATATGGGTTTAC +
Preference number: 5 (lower is better)
Translates to: VFLQPRSGETVPLTQQVQTTPIL*YLIWVY
Trigger: GTAAACCCATATCAGATACAACAAAATTGGGGTAGT...CTGCACCTGCTGAGTCAAAGGAACAGTCTCCCCAGAACGGGGTTGCAGAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp CTGGTGACACTGGGCAATAGCTGCTCGGGCGAAGTCCTTGATTTTCTTGTACTTTTTAACCTCAGAGATTaGTGGCTAGTTACTGAAGCC +
Preference number: 5 (lower is better)
Translates to: LVTLGNSCSGEVLDFLVLFNLRD*WLVTEA
Trigger: GGCTTCAGTAACTAGCCACAAATCTCTGAGGTTAAA...AAGTACAAGAAAATCAAGGACTTCGCCCGAGCAGCTATTGCCCAGTGTCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp GAAACGGGGGTCTGGTCAGCTCCTAGCTGGGTGGAACCATCAGTATACATCACAGAGCATCATGTTACTTaGACTAAGTTCTTGAACCAA +
Preference number: 5 (lower is better)
Translates to: ETGVWSAPSWVEPSVYITEHHVT*TKFLNQ
Trigger: TTGGTTCAAGAACTTAGTCAAAGTAACATGATGCTC...TGTGATGTATACTGATGGTTCCACCCAGCTAGGAGCTGACCAGACCCCCGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp GAAGCTCAGTCTGCACTGAATGAGTGTAAAAGGGGCGGGAGCTGGGCTTCATCTACATCCTTATTCCGTTaGGACAGAAAGAAAGAATGT +
Preference number: 5 (lower is better)
Translates to: EAQSALNECKRGGSWASSTSLFR*DRKKEC
Trigger: ACATTCTTTCTTTCTGTCCAAACGGAATAAGGATGT...AGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGTGCAGACTGAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp TCAAGGTTTGGGTGGGGACAGTATAAATCAAGCATCTGGGCAGGGGCATGGTGGACATCCTTATTCCGTTaGGACAGAAAGAAAGAATGT +
Preference number: 5 (lower is better)
Translates to: SRFGWGQYKSSIWAGAWWTSLFR*DRKKEC
Trigger: ACATTCTTTCTTTCTGTCCAAACGGAATAAGGATGT...CCACCATGCCCCTGCCCAGATGCTTGATTTATACTGTCCCCACCCAAACCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATATGTAATTCCGGCACTTaGGGAGGCCGGGAGAGGGGA +
Preference number: 5 (lower is better)
Translates to: YLPQAMYKLGTQEASDVICNSGT*GGRERG
Trigger: TCCCCTCTCCCGGCCTCCCAAAGTGCCGGAATTACA...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp TGGTCAGCTCCTAGCTGGGTGGAACCATCAGTATACATCACAGTTATCACCAGGAGCAGAGTGCTCTATTaGAATGTAGATGCATGGATC +
Preference number: 5 (lower is better)
Translates to: WSAPSWVEPSVYITVITRSRVLY*NVDAWI
Trigger: GATCCATGCATCTACATTCAAATAGAGCACTCTGCT...CCTGGTGATAACTGTGATGTATACTGATGGTTCCACCCAGCTAGGAGCTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp CTGGTGACACTGGGCAATAGCTGCTCGGGCGAAGTCCTTGATTTTCTTGTACTTTCTCGAAGCTGGTTATaGCTCGTTATAAGAAACCGT +
Preference number: 5 (lower is better)
Translates to: LVTLGNSCSGEVLDFLVLSRSWL*LVIRNR
Trigger: ACGGTTTCTTATAACGAGCAATAACCAGCTTCGAGA...AAGTACAAGAAAATCAAGGACTTCGCCCGAGCAGCTATTGCCCAGTGTCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTTTTAACCTCAGAGATTaGTGGCTAGTTACTGAAGCC +
Preference number: 5 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIFNLRD*WLVTEA
Trigger: GGCTTCAGTAACTAGCCACAAATCTCTGAGGTTAAA...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTGCAGCAGAATTTTATTaGACAGTCAAACATGAGGGG +
Preference number: 5 (lower is better)
Translates to: ECRQAKEVLILCGTSRDIAAEFY*TVKHEG
Trigger: CCCCTCATGTTTGACTGTCAAATAAAATTCTGCTGC...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp TCCATCACTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCTCTTGCTCCAATTCCTaGAGACGAGCCCCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: SITAKIGIRGSSKVRNSCSCSNS*RRAPRS
Trigger: ACTTCTTGGGGCTCGTCTCAAGGAATTGGAGCAAGA...GCAACTATTTCGTACTTTGGAGCTTCCTCTGATACCAATTTTGGCAGTGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTCTGCCCATTTTATACTaGACTTCATGCTCGAATTAC +
Preference number: 5 (lower is better)
Translates to: ECRQAKEVLILCGTSRDILPILY*TSCSNY
Trigger: GTAATTCGAGCATGAAGTCAAGTATAAAATGGGCAG...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp GAAAATACATCATCTCTTTCAGATTCCTGGAATAACTTCAGAAGTTCCGGATCTGGGGAGACTGTTCCTTaGACTCAGCAGGTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: ENTSSLSDSWNNFRSSGSGETVP*TQQVQL
Trigger: AAGCTGCACCTGCTGAGTCAAAGGAACAGTCTCCCC...AGATCCGGAACTTCTGAAGTTATTCCAGGAATCTGAAAGAGATGATGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp AATAACTTCAGAAGTTCCGGATCTCCAGATAAATGTGTAAGAATGCGCAATTCAGTGGGGGATGACTGTTaGCGCAGGCGTAGTGTCAAA +
Preference number: 5 (lower is better)
Translates to: NNFRSSGSPDKCVRMRNSVGDDC*RRRSVK
Trigger: TTTGACACTACGCCTGCGCAAACAGTCATCCCCCAC...TGAATTGCGCATTCTTACACATTTATCTGGAGATCCGGAACTTCTGAAGTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACATTTAACCTCAGAGATTaGTGGCTAGTTACTGAAGCC +
Preference number: 5 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTFNLRD*WLVTEA
Trigger: GGCTTCAGTAACTAGCCACAAATCTCTGAGGTTAAA...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp GAATGCAGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAACCAAATTTTCAAGTaGACGATATATGTCCCGATG +
Preference number: 5 (lower is better)
Translates to: ECRQAKEVLILCGTSRDINQIFK*TIYVPM
Trigger: CATCGGGACATATATCGTCAACTTGAAAATTTGGTT...AATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCTGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACACTGCCCATTTTATACTaGACTTCATGCTCGAATTAC +
Preference number: 5 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTLPILY*TSCSNY
Trigger: GTAATTCGAGCATGAAGTCAAGTATAAAATGGGCAG...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACAACGATTATAAGTAACTaGGGTAATTACGGCAGACAC +
Preference number: 5 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTTIISN*GNYGRH
Trigger: GTGTCTGCCGTAATTACCCAAGTTACTTATAATCGT...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp ATCACTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCCATTGGATATTAGGATGCTaGGCTGAAAGTCTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: ITAKIGIRGSSKVRNSCHWILGC*AESLPV
Trigger: GACTGGAAGACTTTCAGCCAAGCATCCTAATATCCA...ATGGCAACTATTTCGTACTTTGGAGCTTCCTCTGATACCAATTTTGGCAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGTTTAACCTCAGAGATTaGTGGCTAGTTACTGAAGCC +
Preference number: 5 (lower is better)
Translates to: PHIIAARGISLFLPVFEGFNLRD*WLVTEA
Trigger: GGCTTCAGTAACTAGCCACAAATCTCTGAGGTTAAA...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CAA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATGCATCCAAATTTTCTTaGTCCACAGCCTTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: IIAARGISLFLPVFEGEYASKFS*STALLV
Trigger: AACCAGCAAGGCTGTGGACAAAGAAAATTTGGATGC...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CAA 90 bp AGGCAGGCCAAGGAAGTCCTAATACTCTGTGGTACAAGTAGGGACATTAAAACAGAGCATCATGTTACTTaGACTAAGTTCTTGAACCAA +
Preference number: 5 (lower is better)
Translates to: RQAKEVLILCGTSRDIKTEHHVT*TKFLNQ
Trigger: TTGGTTCAAGAACTTAGTCAAAGTAACATGATGCTC...TGTTTTAATGTCCCTACTTGTACCACAGAGTATTAGGACTTCCTTGGCCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS-3UTR CAA 90 bp TGTTCCACGGGCACATCCTTCCACTGTGAAGTCAGAGTAGAAAATACATCATCTGAGCATCATGTTACTTaGACTAAGTTCTTGAACCAA +
Preference number: 5 (lower is better)
Translates to: CSTGTSFHCEVRVENTSSEHHVT*TKFLNQ
Trigger: TTGGTTCAAGAACTTAGTCAAAGTAACATGATGCTC...AGATGATGTATTTTCTACTCTGACTTCACAGTGGAAGGATGTGCCCGTGGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS-3UTR CAA 90 bp TCCATCACTGCCAAAATTGGTATCAGAGGAAGCTCCAAAGTACGAAATAGTTGCACATCCTTATTCCGTTaGGACAGAAAGAAAGAATGT +
Preference number: 5 (lower is better)
Translates to: SITAKIGIRGSSKVRNSCTSLFR*DRKKEC
Trigger: ACATTCTTTCTTTCTGTCCAAACGGAATAAGGATGT...GCAACTATTTCGTACTTTGGAGCTTCCTCTGATACCAATTTTGGCAGTGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp GAAAATACATCATCTCTTTCAGATTCCTGGAATAACTTCAGAAGTTCCGGATCTGCTTGGCAGAACCTCTaGATGTCTGACTTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: ENTSSLSDSWNNFRSSGSAWQNL*MSDFLK
Trigger: CTTTAAGAAGTCAGACATCAAGAGGTTCTGCCAAGC...AGATCCGGAACTTCTGAAGTTATTCCAGGAATCTGAAAGAGATGATGTATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672725.1
ENST00000672739.1
CDS-3UTR CAA 90 bp CCTCATATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGACTACCCCAATTTTGTaGTATCTGATATGGGTTTAC +
Preference number: 5 (lower is better)
Translates to: PHIIAARGISLFLPVFEGTTPIL*YLIWVY
Trigger: GTAAACCCATATCAGATACAACAAAATTGGGGTAGT...CCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAATATGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CAA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATCTGCCCATTTTATACTaGACTTCATGCTCGAATTAC +
Preference number: 5 (lower is better)
Translates to: IIAARGISLFLPVFEGEYLPILY*TSCSNY
Trigger: GTAATTCGAGCATGAAGTCAAGTATAAAATGGGCAG...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CAA 90 bp TTCCTGTCTTCAAGTTGTACTGAATACTTAACACTGGACTTGTTTATCACTTCCAACAAAATGAGCTTCTaGCTCCAATTCCTTGAGACG +
Preference number: 5 (lower is better)
Translates to: FLSSSCTEYLTLDLFITSNKMSF*LQFLET
Trigger: CGTCTCAAGGAATTGGAGCAAGAAGCTCATTTTGTT...GGAAGTGATAAACAAGTCCAGTGTTAAGTATTCAGTACAACTTGAAGACAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp AATAACTTCAGAAGTTCCGGATCTCCAGATAAATGTGTAAGAATGCGCAATTCATCAACTTTTCTAGACTaGCAGTATCTTAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: NNFRSSGSPDKCVRMRNSSTFLD*QYLRGR
Trigger: CCTGCCTCTAAGATACTGCAAGTCTAGAAAAGTTGA...TGAATTGCGCATTCTTACACATTTATCTGGAGATCCGGAACTTCTGAAGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS-3UTR CAA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATAACCAAATTTTCAAGTaGACGATATATGTCCCGATG +
Preference number: 5 (lower is better)
Translates to: IIAARGISLFLPVFEGEYNQIFK*TIYVPM
Trigger: CATCGGGACATATATCGTCAACTTGAAAATTTGGTT...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CAA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATGAGCATCATGTTACTTaGACTAAGTTCTTGAACCAA +
Preference number: 5 (lower is better)
Translates to: IIAARGISLFLPVFEGEYEHHVT*TKFLNQ
Trigger: TTGGTTCAAGAACTTAGTCAAAGTAACATGATGCTC...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CAA 90 bp ATTATAGCTGCCAGAGGCATTTCATTATTCTTACCGGTTTTTGAAGGGGAGTATTATTCTTACCGGTTTTaGAAGGGGAGTATATTTCCA +
Preference number: 5 (lower is better)
Translates to: IIAARGISLFLPVFEGEYYSYRF*KGSIFP
Trigger: TGGAAATATACTCCCCTTCAAAAACCGGTAAGAATA...ATACTCCCCTTCAAAAACCGGTAAGAATAATGAAATGCCTCTGGCAGCTATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000506763.5
CDS-3UTR CAA 90 bp TATTTACCACAGGCCATGTATAAATTGGGCACTCAAGAAGCATCTGATGTAATAACTACCCCAATTTTGTaGTATCTGATATGGGTTTAC +
Preference number: 5 (lower is better)
Translates to: YLPQAMYKLGTQEASDVITTPIL*YLIWVY
Trigger: GTAAACCCATATCAGATACAACAAAATTGGGGTAGT...TATTACATCAGATGCTTCTTGAGTGCCCAATTTATACATGGCCTGTGGTAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243706.8
ENST00000443786.3
CDS GCA 72 bp TTGCTTCTCGCAGGAGCCCGCCGCCACCGCCCTCCGTaGCCCGCGCGCCTCGCACTGCCTCACGGGAGCGCC +
Preference number: 6 (lower is better)
Translates to: LLLAGARRHRPP*PARLALPHGSA
Trigger: GGCGCTCCCGTGAGGCAGTGCGAGGCGCGCGGGGCACGGAGGGCGGTGGCGGCGGGCTCCTGCGAGAAGCAA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS CCA 72 bp TGCCCCGCGCGCCTCGCACTGCCTCACGGGAGCGCCTaGACGCGCGCAAGCGCACAAGGCGACGGCGTGGTC +
Preference number: 6 (lower is better)
Translates to: CPARLALPHGSA*TRASAQGDGVV
Trigger: GACCACGCCGTCGCCTTGTGCGCTTGCGCGCGTCCAGGCGCTCCCGTGAGGCAGTGCGAGGCGCGCGGGGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS CAA 90 bp GCGCCCAGAACCGAGGCCCGCGTCAGTCACCTCAGGAAGTTCCGCTaGCTTCTCGCAGGAGCCCGCCGCCACCGCCCTCCGTGCCCCGCG +
Preference number: 6 (lower is better)
Translates to: APRTEARVSHLRKFR*LLAGARRHRPPCPA
Trigger: CGCGGGGCACGGAGGGCGGTGGCGGCGGGCTCCTGCGAGAAGCAAGCGGAACTTCCTGAGGTGACTGACGCGGGCCTCGGTTCTGGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506763.5
ENST00000672725.1
ENST00000672739.1
CDS GCA 72 bp CCGAGGCCCGCGTCAGTCACCTCAGGAAGTTCCGCTTaGTTCTCGCAGGAGCCCGCCGCCACCGCCCTCCGT +
Preference number: 6 (lower is better)
Translates to: PRPASVTSGSSA*FSQEPAATALR
Trigger: ACGGAGGGCGGTGGCGGCGGGCTCCTGCGAGAAGCAAGCGGAACTTCCTGAGGTGACTGACGCGGGCCTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506763.5
ENST00000672725.1
ENST00000672739.1
CDS CAA 72 bp ACCGAGGCCCGCGTCAGTCACCTCAGGAAGTTCCGCTaGCTTCTCGCAGGAGCCCGCCGCCACCGCCCTCCG +
Preference number: 6 (lower is better)
Translates to: TEARVSHLRKFR*LLAGARRHRPP
Trigger: CGGAGGGCGGTGGCGGCGGGCTCCTGCGAGAAGCAAGCGGAACTTCCTGAGGTGACTGACGCGGGCCTCGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506763.5
ENST00000672725.1
ENST00000672739.1
CDS CCA 72 bp AGTGTCAAAAGAGGCGGAGTCGGCGAGGCTGGACTATaGGGTGGAGCTGAGCAGGCGGCGCTCGGCCCCCGG +
Preference number: 6 (lower is better)
Translates to: SVKRGGVGEAGL*GGAEQAALGPR
Trigger: CCGGGGGCCGAGCGCCGCCTGCTCAGCTCCACCCCATAGTCCAGCCTCGCCGACTCCGCCTCTTTTGACACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS CCA 72 bp GCGCCTGGACGCGCGCAAGCGCACAAGGCGACGGCGTaGTCGTGGGGGATGACTGTTTGCGCAGGCGTAGTG +
Preference number: 6 (lower is better)
Translates to: APGRAQAHKATA*SWGMTVCAGVV
Trigger: CACTACGCCTGCGCAAACAGTCATCCCCCACGACCACGCCGTCGCCTTGTGCGCTTGCGCGCGTCCAGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS GCA 72 bp GAATCGCCGTCGACACCGAGCTCAGGAAGTTCCGCTTaGTTCTCGCAGGAGCCCGCCGCCACCGCCCTCCGT +
Preference number: 6 (lower is better)
Translates to: ESPSTPSSGSSA*FSQEPAATALR
Trigger: ACGGAGGGCGGTGGCGGCGGGCTCCTGCGAGAAGCAAGCGGAACTTCCTGAGCTCGGTGTCGACGGCGATTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502440.1
CDS CAA 90 bp CGCGCAAGCGCACAAGGCGACGGCGTGGTCGTGGGGGATGACTGTTaGCGCAGGCGTAGTGTCAAAAGAGGCGGAGTCGGCGAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: RASAQGDGVVVGDDC*RRRSVKRGGVGEAG
Trigger: TCCAGCCTCGCCGACTCCGCCTCTTTTGACACTACGCCTGCGCAAACAGTCATCCCCCACGACCACGCCGTCGCCTTGTGCGCTTGCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS GCA 72 bp CACAAGGCGACGGCGTGGTCGTGGGGGATGACTGTTTaGGCAGGCGTAGTGTCAAAAGAGGCGGAGTCGGCG +
Preference number: 6 (lower is better)
Translates to: HKATAWSWGMTV*AGVVSKEAESA
Trigger: CGCCGACTCCGCCTCTTTTGACACTACGCCTGCGCAAACAGTCATCCCCCACGACCACGCCGTCGCCTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS CCA 72 bp GGACGCGCGCAAGCGCACAAGGCGACGGCGTGGTCGTaGGGGATGACTGTTTGCGCAGGCGTAGTGTCAAAA +
Preference number: 6 (lower is better)
Translates to: GRAQAHKATAWS*GMTVCAGVVSK
Trigger: TTTTGACACTACGCCTGCGCAAACAGTCATCCCCCACGACCACGCCGTCGCCTTGTGCGCTTGCGCGCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS CAA 72 bp GCACAAGGCGACGGCGTGGTCGTGGGGGATGACTGTTaGCGCAGGCGTAGTGTCAAAAGAGGCGGAGTCGGC +
Preference number: 6 (lower is better)
Translates to: AQGDGVVVGDDC*RRRSVKRGGVG
Trigger: GCCGACTCCGCCTCTTTTGACACTACGCCTGCGCAAACAGTCATCCCCCACGACCACGCCGTCGCCTTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672739.1
CDS GCA 72 bp AGAATCTATAATGATTCCTCCTCAGGAAGTTCCGCTTaGTTCTCGCAGGAGCCCGCCGCCACCGCCCTCCGT +
Preference number: 6 (lower is better)
Translates to: RIYNDSSSGSSA*FSQEPAATALR
Trigger: ACGGAGGGCGGTGGCGGCGGGCTCCTGCGAGAAGCAAGCGGAACTTCCTGAGGAGGAATCATTATAGATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243706.8
CDS TCA 72 bp AAATTTTCTTTGTCCACAGCCTTGCTGGTTAGGCTGTaGAGACTCTCCTCTGCCCATTTTATACTTGACTTC +
Preference number: 6 (lower is better)
Translates to: KFSLSTALLVRL*RLSSAHFILDF
Trigger: GAAGTCAAGTATAAAATGGGCAGAGGAGAGTCTTCACAGCCTAACCAGCAAGGCTGTGGACAAAGAAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243706.8
ENST00000443786.3
ENST00000506763.5
ENST00000672725.1
ENST00000672739.1
CDS CAA 90 bp CCTTGCTGGTTAGGCTGTGAAGACTCTCCTCTGCCCATTTTATACTaGACTTCATGCTCGAATTACTTGCTTTTAAGTGAATTAACTGAT +
Preference number: 6 (lower is better)
Translates to: PCWLGCEDSPLPILY*TSCSNYLLLSELTD
Trigger: ATCAGTTAATTCACTTAAAAGCAAGTAATTCGAGCATGAAGTCAAGTATAAAATGGGCAGAGGAGAGTCTTCACAGCCTAACCAGCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243706.8
ENST00000443786.3
ENST00000506763.5
ENST00000672725.1
ENST00000672739.1
CDS CAA 72 bp TTAGGCTGTGAAGACTCTCCTCTGCCCATTTTATACTaGACTTCATGCTCGAATTACTTGCTTTTAAGTGAA +
Preference number: 6 (lower is better)
Translates to: LGCEDSPLPILY*TSCSNYLLLSE
Trigger: TTCACTTAAAAGCAAGTAATTCGAGCATGAAGTCAAGTATAAAATGGGCAGAGGAGAGTCTTCACAGCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000243706.8
ENST00000443786.3
ENST00000506763.5
ENST00000672725.1
ENST00000672739.1
CDS CAA 72 bp AAAATCCTGATCACTAAGCAAAAGCTGATTTCCTCCTaGATACAAAGTATCACAAAGCATGTCCACATCCTT +
Preference number: 6 (lower is better)
Translates to: KILITKQKLISS*IQSITKHVHIL
Trigger: AAGGATGTGGACATGCTTTGTGATACTTTGTATCAAGGAGGAAATCAGCTTTTGCTTAGTGATCAGGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672725.1
CDS TCA 72 bp GTATACAAAGTTAATGCTGCTGTGCTTTGCTCTTCCTaGCTTAGGTATTTTTCCAAGGAAAATTGCGATAAA +
Preference number: 6 (lower is better)
Translates to: VYKVNAAVLCSS*LRYFSKENCDK
Trigger: TTTATCGCAATTTTCCTTGGAAAAATACCTAAGTCAGGAAGAGCAAAGCACAGCAGCATTAACTTTGTATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000243706.8
ENST00000443786.3
ENST00000506763.5
ENST00000672725.1
ENST00000672739.1
CDS CAA 72 bp TTGCTTGTAGAGCATCATGTTACTTTGACTAAGTTCTaGAACCAAATTTTCAAGTTGACGATATATGTCCCG +
Preference number: 6 (lower is better)
Translates to: LLVEHHVTLTKF*NQIFKLTIYVP
Trigger: CGGGACATATATCGTCAACTTGAAAATTTGGTTCAAGAACTTAGTCAAAGTAACATGATGCTCTACAAGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243706.8
ENST00000443786.3
ENST00000506763.5
ENST00000672725.1
ENST00000672739.1
CDS CAA 72 bp TCATTTCCACAACTCATGGTTTTAACTACCCCAATTTaGTTGTATCTGATATGGGTTTACGGTGTTGATTTT +
Preference number: 6 (lower is better)
Translates to: SFPQLMVLTTPI*LYLIWVYGVDF
Trigger: AAAATCAACACCGTAAACCCATATCAGATACAACAAAATTGGGGTAGTTAAAACCATGAGTTGTGGAAATGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000243706.8
ENST00000443786.3
ENST00000502440.1
ENST00000506763.5
ENST00000514395.1
ENST00000672725.1
ENST00000672739.1