RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HAS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000170961

Ensembl transcript IDs: ENST00000303924.5

Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATGTCTTTGTTCAAGTCCCAGCAGCAGTGATATGTCTCCTTTGGTaGCATTATCTGATGCCACAATACTGTACAGCCCCTAGAGGAACT +
Preference number: 1 (lower is better)
Translates to: NVFVQVPAAVICLLW*HYLMPQYCTAPRGT
Trigger: AGTTCCTCTAGGGGCTGTACAGTATTGTGGCATCAGATAATGCCACCAAAGGAGACATATCACTGCTGCTGGGACTTGAACAAAGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR CCA 90 bp ATAAATGTCTTTGTTCAAGTCCCAGCAGCAGTGATATGTCTCCTTTaGTGGCATTATCTGATGCCACAATACTGTACAGCCCCTAGAGGA +
Preference number: 1 (lower is better)
Translates to: INVFVQVPAAVICLL*WHYLMPQYCTAPRG
Trigger: TCCTCTAGGGGCTGTACAGTATTGTGGCATCAGATAATGCCACCAAAGGAGACATATCACTGCTGCTGGGACTTGAACAAAGACATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR TCA 90 bp TTGTATGTGTCCAAAATTATACAGATAATTTCTCCACTTTCCACTTaGCTTGTTCTGGGAAAACACTGCCAGAATCTCCAAAGATTATTC +
Preference number: 1 (lower is better)
Translates to: LYVSKIIQIISPLST*LVLGKHCQNLQRLF
Trigger: GAATAATCTTTGGAGATTCTGGCAGTGTTTTCCCAGAACAAGTCAAGTGGAAAGTGGAGAAATTATCTGTATAATTTTGGACACATACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR CAA 90 bp CAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACCTTTTaGTACTCTGAAGGTAGGATGTGCAGCTTTTTCTTAGGCAGGATA +
Preference number: 2 (lower is better)
Translates to: QALQSVRVLSLRCTF*YSEGRMCSFFLGRI
Trigger: TATCCTGCCTAAGAAAAAGCTGCACATCCTACCTTCAGAGTACAAAAAGGTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR TCA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCAAGTCCCAGCAGCAGTaGTATGTCTCCTTTGGTGGC +
Preference number: 2 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSKSQQQ*YVSFGG
Trigger: GCCACCAAAGGAGACATATCACTGCTGCTGGGACTT...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR CCA 90 bp ATCCTTTTCTTCCATGATAACCCACATAAAGCATGGCTAGTGAGGTATATAGGGGTGATATGTCTCCTTTaGTGGCATTATCTGATGCCA +
Preference number: 2 (lower is better)
Translates to: ILFFHDNPHKAWLVRYIGVICLL*WHYLMP
Trigger: TGGCATCAGATAATGCCACCAAAGGAGACATATCAC...CCCTATATACCTCACTAGCCATGCTTTATGTGGGTTATCATGGAAGAAAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR CAA 90 bp AAAGGCAAACTCAAGTTTTCATCTCATTTATTGGCATGGTGTGTTTaGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: KGKLKFSSHLLAWCV*FSTSSPISESLESQ
Trigger: CTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAACACACCATGCCAATAAATGAGATGAAAACTTGAGTTTGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR GCA 90 bp ACAGGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAACCATGTTTTGTCCAGTaGTGGATGCCTACTGTTTTC +
Preference number: 2 (lower is better)
Translates to: TGPEQEIGSDDLCNSEKQPCFVQ*WMPTVF
Trigger: GAAAACAGTAGGCATCCAGCACTGGACAAAACATGG...TTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR CAA 90 bp CACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTaGTCCAGTGCTGGATGCCTACTGTTTTCTTTCAAAGACTATCAT +
Preference number: 2 (lower is better)
Translates to: HCQNLQRLFIFDTHV*SSAGCLLFSFKDYH
Trigger: ATGATAGTCTTTGAAAGAAAACAGTAGGCATCCAGCACTGGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR TCA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATTCTCCACTTTCCACTTaGCTTGTTCTGGGAAAACAC +
Preference number: 2 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNSPLST*LVLGKH
Trigger: GTGTTTTCCCAGAACAAGTCAAGTGGAAAGTGGAGA...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR GCA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATGGTGTTGTGTGTGACTaGAAACGTCAAAACATGGAA +
Preference number: 2 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNGVVCD*KRQNME
Trigger: TTCCATGTTTTGACGTTTGCAGTCACACACAACACC...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR GCA 90 bp AATTATTCATATATTCCGATTGTGTTTTCAACACAGGTCTACACAGCACCAGCTTTGTCCAGTGCTGGATaGCTACTGTTTTCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: NYSYIPIVFSTQVYTAPALSSAG*LLFSFK
Trigger: TTTGAAAGAAAACAGTAGGCATCCAGCACTGGACAA...AGCTGGTGCTGTGTAGACCTGTGTTGAAAACACAATCGGAATATATGAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR CCA 90 bp AATTATTCATATATTCCGATTGTGTTTTCAACACAGGTCTACACAGCACCAGCTTGTTTTGTCCAGTGCTaGATGCCTACTGTTTTCTTT +
Preference number: 2 (lower is better)
Translates to: NYSYIPIVFSTQVYTAPACFVQC*MPTVFF
Trigger: AAAGAAAACAGTAGGCATCCAGCACTGGACAAAACA...AGCTGGTGCTGTGTAGACCTGTGTTGAAAACACAATCGGAATATATGAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR TCA 90 bp ACAGGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAGGATAGATACTTGGTaGTTCTATCTGCCAATTTTG +
Preference number: 2 (lower is better)
Translates to: TGPEQEIGSDDLCNSEKQRIDTW*FYLPIL
Trigger: CAAAATTGGCAGATAGAATCACCAAGTATCTATCCT...TTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR CCA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATATATGTCTCCTTTGGTaGCATTATCTGATGCCACAA +
Preference number: 2 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNICLLW*HYLMPQ
Trigger: TTGTGGCATCAGATAATGCCACCAAAGGAGACATAT...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR CAA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACTTTGATACCCATGTTTaGTCCAGTGCTGGATGCCTA +
Preference number: 3 (lower is better)
Translates to: VLFSTSSPISESLESQMYFDTHV*SSAGCL
Trigger: TAGGCATCCAGCACTGGACAAAACATGGGTATCAAA...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR CAA 90 bp ACAGGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAGTGATATGTCTCCTTaGGTGGCATTATCTGATGCC +
Preference number: 3 (lower is better)
Translates to: TGPEQEIGSDDLCNSEKQSDMSP*VALSDA
Trigger: GGCATCAGATAATGCCACCAAAGGAGACATATCACT...TTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR CAA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATCACTTTCCACTTGACTaGTTCTGGGAAAACACTGCC +
Preference number: 3 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNHFPLD*FWENTA
Trigger: GGCAGTGTTTTCCCAGAACAAGTCAAGTGGAAAGTG...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303924.5
3UTR-3UTR CAA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCAAAATTGCACTACCTTaGGCCTTGATTTTCAACGAT +
Preference number: 3 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSKIALP*ALIFND
Trigger: ATCGTTGAAAATCAAGGCCAAAGGTAGTGCAATTTT...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp CATAAAGCATGGCTAGTGAGGTATATAGGGCAAAACACTTTCAGGCGGATGCACCTCAGCCTGTCTGTGTaGTCCCGGAGGGTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: HKAWLVRYIGQNTFRRMHLSLSV*SRRVGG
Trigger: GCCACCGACCCTCCGGGACCACACAGACAGGCTGAG...GTGCATCCGCCTGAAAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp CAATACTGTACAGCCCCTAGAGGAACTAAGGTGTTGTGTGTGACTGCAAACGTCCTCGGAAGTAGGACTTaGTCCAACGGGTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QYCTAPRGTKVLCVTANVLGSRT*SNGSAG
Trigger: ACCAGCAGACCCGTTGGAGCAAGTCCTACTTCCGAG...GACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp CATAAAGCATGGCTAGTGAGGTATATAGGGCAAAACACTTTCAGGCGGATGCACTCTGGTTCAATGGGCTaGTCGAAGCCAGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: HKAWLVRYIGQNTFRRMHSGSMG*SKPGLG
Trigger: ACCCAGTCCTGGCTTCGAGCAGCCCATTGAACCAGA...GTGCATCCGCCTGAAAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACGTCCCGGAGGGTCGGTaGCGGGCAGTTTCCAAAATT +
Preference number: 4 (lower is better)
Translates to: VLFSTSSPISESLESQMYVPEGR*RAVSKI
Trigger: AATTTTGGAAACTGCCCGCCACCGACCCTCCGGGAC...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp CATAAAGCATGGCTAGTGAGGTATATAGGGCAAAACACTTTCAGGCGGATGCACACCCGGTTCGTGAGATaGCTGTCATCACCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: HKAWLVRYIGQNTFRRMHTRFVR*LSSPKL
Trigger: TAGCTTTGGTGATGACAGGCATCTCACGAACCGGGT...GTGCATCCGCCTGAAAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp ATCCTTTTCTTCCATGATAACCCACATAAAGCATGGCTAGTGAGGTATATAGGGTCTTTCCAGACGTCTTaGCTTCTCCTTCCCCGCCGT +
Preference number: 4 (lower is better)
Translates to: ILFFHDNPHKAWLVRYIGSFQTS*LLLPRR
Trigger: ACGGCGGGGAAGGAGAAGTCAAGACGTCTGGAAAGA...CCCTATATACCTCACTAGCCATGCTTTATGTGGGTTATCATGGAAGAAAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp CATAAAGCATGGCTAGTGAGGTATATAGGGCAAAACACTTTCAGGCGGATGCACCCAGATATAAGTGGCTaGTTTGTCTCTGCCCATGAC +
Preference number: 4 (lower is better)
Translates to: HKAWLVRYIGQNTFRRMHPDISG*FVSAHD
Trigger: GTCATGGGCAGAGACAAATCAGCCACTTATATCTGG...GTGCATCCGCCTGAAAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp ATCCTTTTCTTCCATGATAACCCACATAAAGCATGGCTAGTGAGGTATATAGGGTCAGCACCCGGTTCGTaGGATGCCTGTCATCACCAA +
Preference number: 4 (lower is better)
Translates to: ILFFHDNPHKAWLVRYIGSAPGS*DACHHQ
Trigger: TTGGTGATGACAGGCATCTCACGAACCGGGTGCTGA...CCCTATATACCTCACTAGCCATGCTTTATGTGGGTTATCATGGAAGAAAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp CAATACTGTACAGCCCCTAGAGGAACTAAGGTGTTGTGTGTGACTGCAAACGTCACAGCGTCAAAAGCATaGCCCAATAGCATGCATAGA +
Preference number: 4 (lower is better)
Translates to: QYCTAPRGTKVLCVTANVTASKA*PNSMHR
Trigger: TCTATGCATGCTATTGGGTCATGCTTTTGACGCTGT...GACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp ACAGGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAACTTCCCCGCCGTTGTTaGCCTTCTGCCTCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TGPEQEIGSDDLCNSEKQLPRRC*PSASSN
Trigger: GTTGGAGGAGGCAGAAGGGCAACAACGGCGGGGAAG...TTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp CAATACTGTACAGCCCCTAGAGGAACTAAGGTGTTGTGTGTGACTGCAAACGTCAGAAAAGTCTTTGGCTaGGGCTGTTTCAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QYCTAPRGTKVLCVTANVRKVFG*GCFKSL
Trigger: CAGAGACTTGAAACAGCCCCAGCCAAAGACTTTTCT...GACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp CATAAAGCATGGCTAGTGAGGTATATAGGGCAAAACACTTTCAGGCGGATGCACCCGGGACCCTTTTCGTaGAAGTTGTTCTTCCAGATA +
Preference number: 4 (lower is better)
Translates to: HKAWLVRYIGQNTFRRMHPGPFS*KLFFQI
Trigger: TATCTGGAAGAACAACTTCCACGAAAAGGGTCCCGG...GTGCATCCGCCTGAAAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp CAATACTGTACAGCCCCTAGAGGAACTAAGGTGTTGTGTGTGACTGCAAACGTCTTCTCCATGTGTCTCTaGCTCACCATAATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: QYCTAPRGTKVLCVTANVFSMCL*LTIMLF
Trigger: AAACAGCATTATGGTGAGGCAGAGACACATGGAGAA...GACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp CAATACTGTACAGCCCCTAGAGGAACTAAGGTGTTGTGTGTGACTGCAAACGTCCAATTGCAAACATCTTaGCGGGAAGTAAACTCGACA +
Preference number: 4 (lower is better)
Translates to: QYCTAPRGTKVLCVTANVQLQTS*REVNST
Trigger: TGTCGAGTTTACTTCCCGCCAAGATGTTTGCAATTG...GACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp ACAGGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAACCGTTGTTGCCCTTCTaGCTCCTCCAACTTAAGGGG +
Preference number: 4 (lower is better)
Translates to: TGPEQEIGSDDLCNSEKQPLLPF*LLQLKG
Trigger: CCCCTTAAGTTGGAGGAGGCAGAAGGGCAACAACGG...TTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACGCTGTTTCAAGTCTCTaGTTCAATGGGCTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: VLFSTSSPISESLESQMYAVSSL*FNGLLE
Trigger: TTCGAGCAGCCCATTGAACCAGAGACTTGAAACAGC...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACTGGGAGAAAAGTCTTTaGCTGGGGCTGTTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: VLFSTSSPISESLESQMYWEKSL*LGLFQV
Trigger: GACTTGAAACAGCCCCAGCCAAAGACTTTTCTCCCA...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACCTCCAACGGGTCTGCTaGTTTAGCCATCTGAGATAT +
Preference number: 4 (lower is better)
Translates to: VLFSTSSPISESLESQMYLQRVC*FSHLRY
Trigger: ATATCTCAGATGGCTAAACCAGCAGACCCGTTGGAG...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp CAATACTGTACAGCCCCTAGAGGAACTAAGGTGTTGTGTGTGACTGCAAACGTCAGGATAGATACTTGGTaGTTCTATCTGCCAATTTTG +
Preference number: 4 (lower is better)
Translates to: QYCTAPRGTKVLCVTANVRIDTW*FYLPIL
Trigger: CAAAATTGGCAGATAGAATCACCAAGTATCTATCCT...GACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCAAGTCTCTGGTTCAATaGGCTGCTCGAAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSKSLVQ*AARSQD
Trigger: GTCCTGGCTTCGAGCAGCCCATTGAACCAGAGACTT...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp CATAAAGCATGGCTAGTGAGGTATATAGGGCAAAACACTTTCAGGCGGATGCACATATGTCTCCTTTGGTaGCATTATCTGATGCCACAA +
Preference number: 4 (lower is better)
Translates to: HKAWLVRYIGQNTFRRMHICLLW*HYLMPQ
Trigger: TTGTGGCATCAGATAATGCCACCAAAGGAGACATAT...GTGCATCCGCCTGAAAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACGTAAAGGTCATCTTCTaGGTTCCCATCTATGACCAT +
Preference number: 4 (lower is better)
Translates to: VLFSTSSPISESLESQMYVKVIF*VPIYDH
Trigger: ATGGTCATAGATGGGAACTCAGAAGATGACCTTTAC...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp AATTATTCATATATTCCGATTGTGTTTTCAACACAGGTCTACACAGCACCAGCTAATGGTTTTCCTTCCTaGTGTGCCCCACCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: NYSYIPIVFSTQVYTAPANGFPS*CAPPSF
Trigger: AAAGCTGGGTGGGGCACATCAGGAAGGAAAACCATT...AGCTGGTGCTGTGTAGACCTGTGTTGAAAACACAATCGGAATATATGAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp ACAGGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAATTGCTCCAACGGGTCTaGTGGTTTAGCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: TGPEQEIGSDDLCNSEKQLLQRV*WFSHLR
Trigger: TCTCAGATGGCTAAACCAGCAGACCCGTTGGAGCAA...TTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp AATTATTCATATATTCCGATTGTGTTTTCAACACAGGTCTACACAGCACCAGCTGCTCGAAGCCAGGACTaGGTAATTCTTTCCAGACGT +
Preference number: 4 (lower is better)
Translates to: NYSYIPIVFSTQVYTAPAARSQD*VILSRR
Trigger: ACGTCTGGAAAGAATTACCCAGTCCTGGCTTCGAGC...AGCTGGTGCTGTGTAGACCTGTGTTGAAAACACAATCGGAATATATGAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACGGATTACTGTGGCAATaGGAAAGAAAGGAAAGAATC +
Preference number: 4 (lower is better)
Translates to: VLFSTSSPISESLESQMYGLLWQ*ERKERI
Trigger: GATTCTTTCCTTTCTTTCTCATTGCCACAGTAATCC...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATCACACTTCGTCCCAGTaGTCTGAAGGCTGTGTACAT +
Preference number: 4 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNHTSSQ*SEGCVH
Trigger: ATGTACACAGCCTTCAGAGCACTGGGACGAAGTGTG...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp ACAGGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAGCTGTGTATTTTGTTaGATAGCCCAGGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: TGPEQEIGSDDLCNSEKQSCVFC*IAQAQH
Trigger: GTGCTGAGCCTGGGCTATGCAACAAAATACACAGCT...TTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACTTGTCCAGTGCTGGATaGCTACTGTTTTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: VLFSTSSPISESLESQMYLSSAG*LLFSFK
Trigger: TTTGAAAGAAAACAGTAGGCATCCAGCACTGGACAA...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp AATTATTCATATATTCCGATTGTGTTTTCAACACAGGTCTACACAGCACCAGCTTTGGATGATGAGGTGTaGTGCCAAAAAGGCACCATA +
Preference number: 4 (lower is better)
Translates to: NYSYIPIVFSTQVYTAPALDDEV*CQKGTI
Trigger: TATGGTGCCTTTTTGGCATCACACCTCATCATCCAA...AGCTGGTGCTGTGTAGACCTGTGTTGAAAACACAATCGGAATATATGAATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp AATTATTCATATATTCCGATTGTGTTTTCAACACAGGTCTACACAGCACCAGCTTACACTGCTGAGGAATaGGATCCAGGAATCGTACTT +
Preference number: 4 (lower is better)
Translates to: NYSYIPIVFSTQVYTAPAYTAEE*DPGIVL
Trigger: AAGTACGATTCCTGGATCTCATTCCTCAGCAGTGTA...AGCTGGTGCTGTGTAGACCTGTGTTGAAAACACAATCGGAATATATGAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACTTGCCCATAAATTCTTaGTTGTACCAATCTTCCACA +
Preference number: 4 (lower is better)
Translates to: VLFSTSSPISESLESQMYLPINS*LYQSST
Trigger: TGTGGAAGATTGGTACAATCAAGAATTTATGGGCAA...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp ATCCTTTTCTTCCATGATAACCCACATAAAGCATGGCTAGTGAGGTATATAGGGCAAAAGATGATTTTATaGGACCTACTAGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: ILFFHDNPHKAWLVRYIGQKMIL*DLLAGQ
Trigger: CTGTCCAGCTAGTAGGTCTCATAAAATCATCTTTTG...CCCTATATACCTCACTAGCCATGCTTTATGTGGGTTATCATGGAAGAAAAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACGATTGTAAACCAAACTaGTACTGGAATGAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: VLFSTSSPISESLESQMYDCKPN*YWNESY
Trigger: ATAGGACTCATTCCAGTATCAGTTTGGTTTACAATC...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp AATTATTCATATATTCCGATTGTGTTTTCAACACAGGTCTACACAGCACCAGCTTCTCCACTTTCCACTTaGCTTGTTCTGGGAAAACAC +
Preference number: 4 (lower is better)
Translates to: NYSYIPIVFSTQVYTAPASPLST*LVLGKH
Trigger: GTGTTTTCCCAGAACAAGTCAAGTGGAAAGTGGAGA...AGCTGGTGCTGTGTAGACCTGTGTTGAAAACACAATCGGAATATATGAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp ATCCTTTTCTTCCATGATAACCCACATAAAGCATGGCTAGTGAGGTATATAGGGGTTTATTGTTGCAATTaGAAACATCTTGGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: ILFFHDNPHKAWLVRYIGVYCCN*KHLGGK
Trigger: CTTCCCGCCAAGATGTTTGCAATTGCAACAATAAAC...CCCTATATACCTCACTAGCCATGCTTTATGTGGGTTATCATGGAAGAAAAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCTTTTCCTTCCTGATGTaGCCCACCCAGCTTTGTTTA +
Preference number: 4 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSFSFLM*PTQLCL
Trigger: TAAACAAAGCTGGGTGGGGCACATCAGGAAGGAAAA...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCCATGACCCAATAGCATaGATAGAGCAACGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSHDPIA*IEQRSN
Trigger: GTTGGAACGTTGCTCTATGCATGCTATTGGGTCATG...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATAAGGCAAACAGGCTTTaGATGATGAGGTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNKANRL*MMRCDA
Trigger: GGCATCACACCTCATCATCCAAAGCCTGTTTGCCTT...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATCAATATAAGCAGCTGTaGTTCCAAGGAGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNQYKQL*FQGGER
Trigger: TCTCTCTCCTCCTTGGAATCACAGCTGCTTATATTG...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATTTGGACAAGACCAATTaGGTTACGTGTTGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNLDKTN*VTCCEL
Trigger: AAGCTCGCAACACGTAACGCAATTGGTCTTGTCCAA...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACAGCTTTGTTTATTGTTaGAATTGCAAACATCTTGGC +
Preference number: 4 (lower is better)
Translates to: VLFSTSSPISESLESQMYSFVYC*NCKHLG
Trigger: GCCAAGATGTTTGCAATTGCAACAATAAACAAAGCT...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp AATTATTCATATATTCCGATTGTGTTTTCAACACAGGTCTACACAGCACCAGCTGGTGTTGTGTGTGACTaGAAACGTCAAAACATGGAA +
Preference number: 4 (lower is better)
Translates to: NYSYIPIVFSTQVYTAPAGVVCD*KRQNME
Trigger: TTCCATGTTTTGACGTTTGCAGTCACACACAACACC...AGCTGGTGCTGTGTAGACCTGTGTTGAAAACACAATCGGAATATATGAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATCCATGTTTTGTCCAGTaGTGGATGCCTACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNPCFVQ*WMPTVF
Trigger: GAAAACAGTAGGCATCCAGCACTGGACAAAACATGG...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCATGAGACCTACTAGCTaGACAGTTAACAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSMRPTS*TVNKKR
Trigger: CCTCTTCTTGTTAACTGTCCAGCTAGTAGGTCTCAT...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp AATTATTCATATATTCCGATTGTGTTTTCAACACAGGTCTACACAGCACCAGCTGTGATATGTCTCCTTTaGTGGCATTATCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: NYSYIPIVFSTQVYTAPAVICLL*WHYLMP
Trigger: TGGCATCAGATAATGCCACCAAAGGAGACATATCAC...AGCTGGTGCTGTGTAGACCTGTGTTGAAAACACAATCGGAATATATGAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCGTCAAGCATAGTGTCTaGATCACAAACCTGTACATA +
Preference number: 4 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSVKHSV*ITNLYI
Trigger: TATGTACAGGTTTGTGATTCAGACACTATGCTTGAC...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp AATTATTCATATATTCCGATTGTGTTTTCAACACAGGTCTACACAGCACCAGCTAATATCTTACACTGCTaGGGAATGAGATCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: NYSYIPIVFSTQVYTAPANILHC*GMRSRN
Trigger: ATTCCTGGATCTCATTCCTCAGCAGTGTAAGATATT...AGCTGGTGCTGTGTAGACCTGTGTTGAAAACACAATCGGAATATATGAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCAATTGCGTTACGTGTTaGGAGCTTTCTTTATGTGAC +
Preference number: 4 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSNCVTC*ELSLCD
Trigger: GTCACATAAAGAAAGCTCGCAACACGTAACGCAATT...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCTCTTCCACAAACTCATaGAACAAGGAGTTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSSSTNS*NKEFLY
Trigger: GTACAGAAACTCCTTGTTGCATGAGTTTGTGGAAGA...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCTTTGTGAAACCACATTaGATTGTACAGCCATTCTCG +
Preference number: 4 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSFVKPH*IVQPFS
Trigger: CGAGAATGGCTGTACAATGCAATGTGGTTTCACAAA...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCCAACACCTCCAACCATaGGATCTTCTTCTAAAACTT +
Preference number: 4 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSQHLQP*DLLLKL
Trigger: AAGTTTTAGAAGAAGATCCCATGGTTGGAGGTGTTG...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp ACAGGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAATACTTGTTTAAAATCTaGACATCTCCCCCAACACCT +
Preference number: 4 (lower is better)
Translates to: TGPEQEIGSDDLCNSEKQYLFKI*TSPPTP
Trigger: AGGTGTTGGGGGAGATGTCCAGATTTTAAACAAGTA...TTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATAACCCACATAAAGCATaGCTAGTGAGGTATATAGGG +
Preference number: 4 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNNPHKA*LVRYIG
Trigger: CCCTATATACCTCACTAGCCATGCTTTATGTGGGTT...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCTGTTTTGTCCAGTGCTaGATGCCTACTGTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSCFVQC*MPTVFF
Trigger: AAAGAAAACAGTAGGCATCCAGCACTGGACAAAACA...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR GCA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATGTTCTGGGAAAACACTaGCAGAATCTCCAAAGATTA +
Preference number: 4 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNVLGKH*QNLQRL
Trigger: TAATCTTTGGAGATTCTGGCAGTGTTTTCCCAGAAC...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATAGACTCCAAAGAGTGTaGTTCCAATTATTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNRLQRV*FQLFSG
Trigger: TCCTGAGAATAATTGGAACCACACTCTTTGGAGTCT...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp AATTATTCATATATTCCGATTGTGTTTTCAACACAGGTCTACACAGCACCAGCTTGCAGATACTTTTGTTaGACAAGACCAATTGCGTTA +
Preference number: 4 (lower is better)
Translates to: NYSYIPIVFSTQVYTAPACRYFC*TRPIAL
Trigger: TAACGCAATTGGTCTTGTCCAACAAAAGTATCTGCA...AGCTGGTGCTGTGTAGACCTGTGTTGAAAACACAATCGGAATATATGAATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CCA 90 bp ACAGGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAGCAAACGTCAAAACATaGAAGATCATACATCAAGCA +
Preference number: 4 (lower is better)
Translates to: TGPEQEIGSDDLCNSEKQANVKT*KIIHQA
Trigger: TGCTTGATGTATGATCTTCCATGTTTTGACGTTTGC...TTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR TCA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATGGCAGTTTCCAAAATTaGGGTAATAAGAGATCAGAT +
Preference number: 4 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNGSFQN*GNKRSD
Trigger: ATCTGATCTCTTATTACCTCAATTTTGGAAACTGCC...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS TCA 90 bp ATGGGCTGCTCGAAGCCAGGACTGGGTAATTCTTTCCAGACGTCTTaGCTTCTCCTTCCCCGCCGTTGTTGCCCTTCTGCCTCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: MGCSKPGLGNSFQTS*LLLPRRCCPSASSN
Trigger: GTTGGAGGAGGCAGAAGGGCAACAACGGCGGGGAAGGAGAAGTCAAGACGTCTGGAAAGAATTACCCAGTCCTGGCTTCGAGCAGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CCA 90 bp GGCTGTTTCAAGTCTCTGGTTCAATGGGCTGCTCGAAGCCAGGACTaGGTAATTCTTTCCAGACGTCTTGACTTCTCCTTCCCCGCCGTT +
Preference number: 5 (lower is better)
Translates to: GCFKSLVQWAARSQD*VILSRRLDFSFPAV
Trigger: AACGGCGGGGAAGGAGAAGTCAAGACGTCTGGAAAGAATTACCCAGTCCTGGCTTCGAGCAGCCCATTGAACCAGAGACTTGAAACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CCA 90 bp GGGAGAAAAGTCTTTGGCTGGGGCTGTTTCAAGTCTCTGGTTCAATaGGCTGCTCGAAGCCAGGACTGGGTAATTCTTTCCAGACGTCTT +
Preference number: 5 (lower is better)
Translates to: GRKVFGWGCFKSLVQ*AARSQDWVILSRRL
Trigger: AAGACGTCTGGAAAGAATTACCCAGTCCTGGCTTCGAGCAGCCCATTGAACCAGAGACTTGAAACAGCCCCAGCCAAAGACTTTTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS TCA 90 bp TGTCTGTGTGGTCCCGGAGGGTCGGTGGCGGGCAGTTTCCAAAATTaGGGTAATAAGAGATCAGATGAATTTGAGACGACCGGCCAAAAA +
Preference number: 5 (lower is better)
Translates to: CLCGPGGSVAGSFQN*GNKRSDEFETTGQK
Trigger: TTTTTGGCCGGTCGTCTCAAATTCATCTGATCTCTTATTACCTCAATTTTGGAAACTGCCCGCCACCGACCCTCCGGGACCACACAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS GCA 90 bp TATAGGTGTTTCAGTAAGGCACTTAGATCGAGCTGTGTATTTTGTTaGATAGCCCAGGCTCAGCACCCGGTTCGTGAGATGCCTGTCATC +
Preference number: 5 (lower is better)
Translates to: YRCFSKALRSSCVFC*IAQAQHPVREMPVI
Trigger: GATGACAGGCATCTCACGAACCGGGTGCTGAGCCTGGGCTATGCAACAAAATACACAGCTCGATCTAAGTGCCTTACTGAAACACCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp CAATACTGTACAGCCCCTAGAGGAACTAAGGTGTTGTGTGTGACTGCAAACGTCGTTGGACAAGACCAATaGCGTTACGTGTTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: QYCTAPRGTKVLCVTANVVGQDQ*RYVLRA
Trigger: AGCTCGCAACACGTAACGCAATTGGTCTTGTCCAAC...GACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp CAATACTGTACAGCCCCTAGAGGAACTAAGGTGTTGTGTGTGACTGCAAACGTCTTGGGAGAAAAGTCTTaGGCTGGGGCTGTTTCAAGT +
Preference number: 5 (lower is better)
Translates to: QYCTAPRGTKVLCVTANVLGEKS*AGAVSS
Trigger: ACTTGAAACAGCCCCAGCCAAAGACTTTTCTCCCAA...GACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp CAATACTGTACAGCCCCTAGAGGAACTAAGGTGTTGTGTGTGACTGCAAACGTCGTAGTCTGGATCTTCTaGATAGGCAGCGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: QYCTAPRGTKVLCVTANVVVWIF*IGSDAK
Trigger: CTTTGCATCGCTGCCTATCAAGAAGATCCAGACTAC...GACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS TCA 90 bp GTTGGACAAGACCAATTGCGTTACGTGTTGCGAGCTTTCTTTATGTaGCTCATCTGTCTCACCGGGACCCTTTTCGTGGAAGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: VGQDQLRYVLRAFFM*LICLTGTLFVEVVL
Trigger: AAGAACAACTTCCACGAAAAGGGTCCCGGTGAGACAGATGAGTCACATAAAGAAAGCTCGCAACACGTAACGCAATTGGTCTTGTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp CATAAAGCATGGCTAGTGAGGTATATAGGGCAAAACACTTTCAGGCGGATGCACAGAGGAACTAAGGTGTaGTGTGTGACTGCAAACGTC +
Preference number: 5 (lower is better)
Translates to: HKAWLVRYIGQNTFRRMHRGTKV*CVTANV
Trigger: GACGTTTGCAGTCACACACAACACCTTAGTTCCTCT...GTGCATCCGCCTGAAAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp CATAAAGCATGGCTAGTGAGGTATATAGGGCAAAACACTTTCAGGCGGATGCACCACTTTCCACTTGACTaGTTCTGGGAAAACACTGCC +
Preference number: 5 (lower is better)
Translates to: HKAWLVRYIGQNTFRRMHHFPLD*FWENTA
Trigger: GGCAGTGTTTTCCCAGAACAAGTCAAGTGGAAAGTG...GTGCATCCGCCTGAAAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp CATAAAGCATGGCTAGTGAGGTATATAGGGCAAAACACTTTCAGGCGGATGCACTTTGATACCCATGTTTaGTCCAGTGCTGGATGCCTA +
Preference number: 5 (lower is better)
Translates to: HKAWLVRYIGQNTFRRMHFDTHV*SSAGCL
Trigger: TAGGCATCCAGCACTGGACAAAACATGGGTATCAAA...GTGCATCCGCCTGAAAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp CAATACTGTACAGCCCCTAGAGGAACTAAGGTGTTGTGTGTGACTGCAAACGTCCAATCAGTGAGAGTCTaGAGTCTCAGATGTACCTTT +
Preference number: 5 (lower is better)
Translates to: QYCTAPRGTKVLCVTANVQSVRV*SLRCTF
Trigger: AAAGGTACATCTGAGACTCAAGACTCTCACTGATTG...GACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS TCA 90 bp TGCCACAATACTGTACAGCCCCTAGAGGAACTAAGGTGTTGTGTGTaGCTGCAAACGTCAAAACATGGAAGATCATACATCAAGCACCAT +
Preference number: 5 (lower is better)
Translates to: CHNTVQPLEELRCCV*LQTSKHGRSYIKHH
Trigger: ATGGTGCTTGATGTATGATCTTCCATGTTTTGACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp ACAGGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAATTCTTTCCAGACGTCTaGACTTCTCCTTCCCCGCCG +
Preference number: 5 (lower is better)
Translates to: TGPEQEIGSDDLCNSEKQFFPDV*TSPSPP
Trigger: CGGCGGGGAAGGAGAAGTCAAGACGTCTGGAAAGAA...TTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp CATAAAGCATGGCTAGTGAGGTATATAGGGCAAAACACTTTCAGGCGGATGCACCAAAGGGCAACTGTTTaGTTCAACTTTATGGGGGTT +
Preference number: 5 (lower is better)
Translates to: HKAWLVRYIGQNTFRRMHQRATV*FNFMGV
Trigger: AACCCCCATAAAGTTGAACAAAACAGTTGCCCTTTG...GTGCATCCGCCTGAAAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp CAATACTGTACAGCCCCTAGAGGAACTAAGGTGTTGTGTGTGACTGCAAACGTCATGCAGATACTTTTGTaGGACAAGACCAATTGCGTT +
Preference number: 5 (lower is better)
Translates to: QYCTAPRGTKVLCVTANVMQILL*DKTNCV
Trigger: AACGCAATTGGTCTTGTCCAACAAAAGTATCTGCAT...GACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp ATCCTTTTCTTCCATGATAACCCACATAAAGCATGGCTAGTGAGGTATATAGGGGAGCTGTGTATTTTGTaGCATAGCCCAGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: ILFFHDNPHKAWLVRYIGELCIL*HSPGSA
Trigger: TGCTGAGCCTGGGCTATGCAACAAAATACACAGCTC...CCCTATATACCTCACTAGCCATGCTTTATGTGGGTTATCATGGAAGAAAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACAAGCACCATGTCATATaGTTGTCCCTTCTTCCGCCT +
Preference number: 5 (lower is better)
Translates to: VLFSTSSPISESLESQMYKHHVI*LSLLPP
Trigger: AGGCGGAAGAAGGGACAACAATATGACATGGTGCTT...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS GCA 90 bp GCAAACATTTCCTTAAGTAGTCTGGATCTTCTTGATAGGCAGCGATaGAAAGGGCAACTGTTTTGTTCAACTTTATGGGGGTTTCTAGGG +
Preference number: 5 (lower is better)
Translates to: ANISLSSLDLLDRQR*KGQLFCSTLWGFLG
Trigger: CCCTAGAAACCCCCATAAAGTTGAACAAAACAGTTGCCCTTTGCATCGCTGCCTATCAAGAAGATCCAGACTACTTAAGGAAATGTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp CATAAAGCATGGCTAGTGAGGTATATAGGGCAAAACACTTTCAGGCGGATGCACATGATGCAGATACTTTaGTTGGACAAGACCAATTGC +
Preference number: 5 (lower is better)
Translates to: HKAWLVRYIGQNTFRRMHMMQIL*LDKTNC
Trigger: GCAATTGGTCTTGTCCAACAAAAGTATCTGCATCAT...GTGCATCCGCCTGAAAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp CATAAAGCATGGCTAGTGAGGTATATAGGGCAAAACACTTTCAGGCGGATGCACGTTGCCCATAAATTCTaGATTGTACCAATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: HKAWLVRYIGQNTFRRMHVAHKF*IVPIFH
Trigger: GTGGAAGATTGGTACAATCAAGAATTTATGGGCAAC...GTGCATCCGCCTGAAAGTGTTTTGCCCTATATACCTCACTAGCCATGCTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACAGTGATATGTCTCCTTaGGTGGCATTATCTGATGCC +
Preference number: 5 (lower is better)
Translates to: VLFSTSSPISESLESQMYSDMSP*VALSDA
Trigger: GGCATCAGATAATGCCACCAAAGGAGACATATCACT...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CCA 90 bp CCTAGAGGAACTAAGGTGTTGTGTGTGACTGCAAACGTCAAAACATaGAAGATCATACATCAAGCACCATGTCATATTGTTGTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: PRGTKVLCVTANVKT*KIIHQAPCHIVVPS
Trigger: AGAAGGGACAACAATATGACATGGTGCTTGATGTATGATCTTCCATGTTTTGACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS TCA 90 bp AGATGCCTGTCATCACCAAAGCTACATTGGTTGCCCATAAATTCTTaGTTGTACCAATCTTCCACAAACTCATGCAACAAGGAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: RCLSSPKLHWLPINS*LYQSSTNSCNKEFL
Trigger: CAGAAACTCCTTGTTGCATGAGTTTGTGGAAGATTGGTACAATCAAGAATTTATGGGCAACCAATGTAGCTTTGGTGATGACAGGCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp AAACACTGCCAGAATCTCCAAAGATTATTCATCTTTGATACCCATGTTTTGTCCATCGAGCTGTGTATTTaGTTGCATAGCCCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: KHCQNLQRLFIFDTHVLSIELCI*LHSPGS
Trigger: TGAGCCTGGGCTATGCAACAAAATACACAGCTCGAT...GGACAAAACATGGGTATCAAAGATGAATAATCTTTGGAGATTCTGGCAGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp ATCCTTTTCTTCCATGATAACCCACATAAAGCATGGCTAGTGAGGTATATAGGGGTTTGTGAAACCACATaGCATTGTACAGCCATTCTC +
Preference number: 5 (lower is better)
Translates to: ILFFHDNPHKAWLVRYIGVCETT*HCTAIL
Trigger: GAGAATGGCTGTACAATGCAATGTGGTTTCACAAAC...CCCTATATACCTCACTAGCCATGCTTTATGTGGGTTATCATGGAAGAAAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp ACAGGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAGCAATTGCAAACATCTaGGCGGGAAGTAAACTCGAC +
Preference number: 5 (lower is better)
Translates to: TGPEQEIGSDDLCNSEKQAIANI*AGSKLD
Trigger: GTCGAGTTTACTTCCCGCCAAGATGTTTGCAATTGC...TTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACATAGTAATTATCCGTTaGGATAAACTGGTAGCCAAC +
Preference number: 5 (lower is better)
Translates to: VLFSTSSPISESLESQMYIVIIR*DKLVAN
Trigger: GTTGGCTACCAGTTTATCCAAACGGATAATTACTAT...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATGTGCCCCACCCAGCTTaGTTTATTGTTGCAATTGCA +
Preference number: 5 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNVPHPA*FIVAIA
Trigger: TGCAATTGCAACAATAAACAAAGCTGGGTGGGGCAC...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp GTTTTGTTTTCCACAAGCTCTCCAATCAGTGAGAGTCTTGAGTCTCAGATGTACAAAATTGCACTACCTTaGGCCTTGATTTTCAACGAT +
Preference number: 5 (lower is better)
Translates to: VLFSTSSPISESLESQMYKIALP*ALIFND
Trigger: ATCGTTGAAAATCAAGGCCAAAGGTAGTGCAATTTT...GTACATCTGAGACTCAAGACTCTCACTGATTGGAGAGCTTGTGGAAAACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp AATTATTCATATATTCCGATTGTGTTTTCAACACAGGTCTACACAGCACCAGCTTTGGCATGGTGTGTTTaGTTTTCCACAAGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: NYSYIPIVFSTQVYTAPALAWCV*FSTSSP
Trigger: TGGAGAGCTTGTGGAAAACAAAACACACCATGCCAA...AGCTGGTGCTGTGTAGACCTGTGTTGAAAACACAATCGGAATATATGAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATCATCTTGTTCAGCTCTaGGTCATAAAGTCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNHLVQL*VIKSSS
Trigger: TGAGGACGACTTTATGACCAAGAGCTGAACAAGATG...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp ACAGGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAATCACCAAAGCTACATaGGTTGCCCATAAATTCTTG +
Preference number: 5 (lower is better)
Translates to: TGPEQEIGSDDLCNSEKQITKAT*VAHKFL
Trigger: CAAGAATTTATGGGCAACCAATGTAGCTTTGGTGAT...TTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS-3UTR CAA 90 bp GGTCCAGAACAGGAAATAGGAAGTGATGATCTGTGTAATTCAGAAAAACAAAATCAGCTTTGTTTATTGTaGCAATTGCAAACATCTTGG +
Preference number: 5 (lower is better)
Translates to: GPEQEIGSDDLCNSEKQNQLCLL*QLQTSW
Trigger: CCAAGATGTTTGCAATTGCAACAATAAACAAAGCTG...ATTTTGTTTTTCTGAATTACACAGATCATCACTTCCTATTTCCTGTTCTGGACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CCA 72 bp GCTCTTGGTCATAAAGTCGTCCTCAGCCTGTCTGTGTaGTCCCGGAGGGTCGGTGGCGGGCAGTTTCCAAAA +
Preference number: 6 (lower is better)
Translates to: ALGHKVVLSLSV*SRRVGGGQFPK
Trigger: TTTTGGAAACTGCCCGCCACCGACCCTCCGGGACCACACAGACAGGCTGAGGACGACTTTATGACCAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS TCA 72 bp TCGAAGCCAGGACTGGGTAATTCTTTCCAGACGTCTTaGCTTCTCCTTCCCCGCCGTTGTTGCCCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: SKPGLGNSFQTS*LLLPRRCCPSA
Trigger: GGCAGAAGGGCAACAACGGCGGGGAAGGAGAAGTCAAGACGTCTGGAAAGAATTACCCAGTCCTGGCTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CCA 72 bp CGTCCTCAGCCTGTCTGTGTGGTCCCGGAGGGTCGGTaGCGGGCAGTTTCCAAAATTGAGGTAATAAGAGAT +
Preference number: 6 (lower is better)
Translates to: RPQPVCVVPEGR*RAVSKIEVIRD
Trigger: ATCTCTTATTACCTCAATTTTGGAAACTGCCCGCCACCGACCCTCCGGGACCACACAGACAGGCTGAGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS GCA 72 bp TGGCTGGGGCTGTTTCAAGTCTCTGGTTCAATGGGCTaGTCGAAGCCAGGACTGGGTAATTCTTTCCAGACG +
Preference number: 6 (lower is better)
Translates to: WLGLFQVSGSMG*SKPGLGNSFQT
Trigger: CGTCTGGAAAGAATTACCCAGTCCTGGCTTCGAGCAGCCCATTGAACCAGAGACTTGAAACAGCCCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CCA 72 bp GTCTTTGGCTGGGGCTGTTTCAAGTCTCTGGTTCAATaGGCTGCTCGAAGCCAGGACTGGGTAATTCTTTCC +
Preference number: 6 (lower is better)
Translates to: VFGWGCFKSLVQ*AARSQDWVILS
Trigger: GGAAAGAATTACCCAGTCCTGGCTTCGAGCAGCCCATTGAACCAGAGACTTGAAACAGCCCCAGCCAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CAA 90 bp AAGACTCAGCAGAACCCAGGAAGCGCAGAATTGGGAGAAAAGTCTTaGGCTGGGGCTGTTTCAAGTCTCTGGTTCAATGGGCTGCTCGAA +
Preference number: 6 (lower is better)
Translates to: KTQQNPGSAELGEKS*AGAVSSLWFNGLLE
Trigger: TTCGAGCAGCCCATTGAACCAGAGACTTGAAACAGCCCCAGCCAAAGACTTTTCTCCCAATTCTGCGCTTCCTGGGTTCTGCTGAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS TCA 72 bp GGTCCCGGAGGGTCGGTGGCGGGCAGTTTCCAAAATTaGGGTAATAAGAGATCAGATGAATTTGAGACGACC +
Preference number: 6 (lower is better)
Translates to: GPGGSVAGSFQN*GNKRSDEFETT
Trigger: GGTCGTCTCAAATTCATCTGATCTCTTATTACCTCAATTTTGGAAACTGCCCGCCACCGACCCTCCGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS TCA 72 bp ATTTTGTTGCATAGCCCAGGCTCAGCACCCGGTTCGTaGGATGCCTGTCATCACCAAAGCTACATTGGTTGC +
Preference number: 6 (lower is better)
Translates to: ILLHSPGSAPGS*DACHHQSYIGC
Trigger: GCAACCAATGTAGCTTTGGTGATGACAGGCATCTCACGAACCGGGTGCTGAGCCTGGGCTATGCAACAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CCA 72 bp TGTGGAAGACTCAGCAGAACCCAGGAAGCGCAGAATTaGGAGAAAAGTCTTTGGCTGGGGCTGTTTCAAGTC +
Preference number: 6 (lower is better)
Translates to: CGRLSRTQEAQN*EKSLWLGLFQV
Trigger: GACTTGAAACAGCCCCAGCCAAAGACTTTTCTCCCAATTCTGCGCTTCCTGGGTTCTGCTGAGTCTTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS GCA 72 bp TTCAGTAAGGCACTTAGATCGAGCTGTGTATTTTGTTaGATAGCCCAGGCTCAGCACCCGGTTCGTGAGATG +
Preference number: 6 (lower is better)
Translates to: FSKALRSSCVFC*IAQAQHPVREM
Trigger: CATCTCACGAACCGGGTGCTGAGCCTGGGCTATGCAACAAAATACACAGCTCGATCTAAGTGCCTTACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CCA 72 bp AAGTCTCTGGTTCAATGGGCTGCTCGAAGCCAGGACTaGGTAATTCTTTCCAGACGTCTTGACTTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: KSLVQWAARSQD*VILSRRLDFSF
Trigger: GAAGGAGAAGTCAAGACGTCTGGAAAGAATTACCCAGTCCTGGCTTCGAGCAGCCCATTGAACCAGAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS TCA 72 bp GACCAATTGCGTTACGTGTTGCGAGCTTTCTTTATGTaGCTCATCTGTCTCACCGGGACCCTTTTCGTGGAA +
Preference number: 6 (lower is better)
Translates to: DQLRYVLRAFFM*LICLTGTLFVE
Trigger: TTCCACGAAAAGGGTCCCGGTGAGACAGATGAGTCACATAAAGAAAGCTCGCAACACGTAACGCAATTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CAA 90 bp GCTCAGCACCCGGTTCGTGAGATGCCTGTCATCACCAAAGCTACATaGGTTGCCCATAAATTCTTGATTGTACCAATCTTCCACAAACTC +
Preference number: 6 (lower is better)
Translates to: AQHPVREMPVITKAT*VAHKFLIVPIFHKL
Trigger: GAGTTTGTGGAAGATTGGTACAATCAAGAATTTATGGGCAACCAATGTAGCTTTGGTGATGACAGGCATCTCACGAACCGGGTGCTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CAA 72 bp TCCTTCCTGATGTGCCCCACCCAGCTTTGTTTATTGTaGCAATTGCAAACATCTTGGCGGGAAGTAAACTCG +
Preference number: 6 (lower is better)
Translates to: SFLMCPTQLCLL*QLQTSWREVNS
Trigger: CGAGTTTACTTCCCGCCAAGATGTTTGCAATTGCAACAATAAACAAAGCTGGGTGGGGCACATCAGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CAA 72 bp CCACAATACTGTACAGCCCCTAGAGGAACTAAGGTGTaGTGTGTGACTGCAAACGTCAAAACATGGAAGATC +
Preference number: 6 (lower is better)
Translates to: PQYCTAPRGTKV*CVTANVKTWKI
Trigger: GATCTTCCATGTTTTGACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS GCA 72 bp ATCACAAACCTGTACATAATCCACACTTCGTCCCAGTaGTCTGAAGGCTGTGTACATGACTTCTCTTTTTCC +
Preference number: 6 (lower is better)
Translates to: ITNLYIIHTSSQ*SEGCVHDFSFS
Trigger: GGAAAAAGAGAAGTCATGTACACAGCCTTCAGAGCACTGGGACGAAGTGTGGATTATGTACAGGTTTGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS TCA 72 bp CTTTTCGTGGAAGTTGTTCTTCCAGATATAAGTGGCTaGTTTGTCTCTGCCCATGACTTCACTGAAGATGTC +
Preference number: 6 (lower is better)
Translates to: LFVEVVLPDISG*FVSAHDFTEDV
Trigger: GACATCTTCAGTGAAGTCATGGGCAGAGACAAATCAGCCACTTATATCTGGAAGAACAACTTCCACGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CAA 90 bp CAAACGTCAAAACATGGAAGATCATACATCAAGCACCATGTCATATaGTTGTCCCTTCTTCCGCCTGCCACACTTATTGATGAGAACTAC +
Preference number: 6 (lower is better)
Translates to: QTSKHGRSYIKHHVI*LSLLPPATLIDENY
Trigger: GTAGTTCTCATCAATAAGTGTGGCAGGCGGAAGAAGGGACAACAATATGACATGGTGCTTGATGTATGATCTTCCATGTTTTGACGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CAA 90 bp TATCTGATGCCACAATACTGTACAGCCCCTAGAGGAACTAAGGTGTaGTGTGTGACTGCAAACGTCAAAACATGGAAGATCATACATCAA +
Preference number: 6 (lower is better)
Translates to: YLMPQYCTAPRGTKV*CVTANVKTWKIIHQ
Trigger: TTGATGTATGATCTTCCATGTTTTGACGTTTGCAGTCACACACAACACCTTAGTTCCTCTAGGGGCTGTACAGTATTGTGGCATCAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS GCA 72 bp TGCATGATGCAGATACTTTTGTTGGACAAGACCAATTaGGTTACGTGTTGCGAGCTTTCTTTATGTGACTCA +
Preference number: 6 (lower is better)
Translates to: CMMQILLLDKTN*VTCCELSLCDS
Trigger: TGAGTCACATAAAGAAAGCTCGCAACACGTAACGCAATTGGTCTTGTCCAACAAAAGTATCTGCATCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CAA 72 bp CACCCAGCTTTGTTTATTGTTGCAATTGCAAACATCTaGGCGGGAAGTAAACTCGACATGTATAACACTGAG +
Preference number: 6 (lower is better)
Translates to: HPALFIVAIANI*AGSKLDMYNTE
Trigger: CTCAGTGTTATACATGTCGAGTTTACTTCCCGCCAAGATGTTTGCAATTGCAACAATAAACAAAGCTGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CAA 72 bp AAACATGGAAGATCATACATCAAGCACCATGTCATATaGTTGTCCCTTCTTCCGCCTGCCACACTTATTGAT +
Preference number: 6 (lower is better)
Translates to: KHGRSYIKHHVI*LSLLPPATLID
Trigger: ATCAATAAGTGTGGCAGGCGGAAGAAGGGACAACAATATGACATGGTGCTTGATGTATGATCTTCCATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CAA 90 bp GAGATGCCTGTCATCACCAAAGCTACATTGGTTGCCCATAAATTCTaGATTGTACCAATCTTCCACAAACTCATGCAACAAGGAGTTTCT +
Preference number: 6 (lower is better)
Translates to: EMPVITKATLVAHKF*IVPIFHKLMQQGVS
Trigger: AGAAACTCCTTGTTGCATGAGTTTGTGGAAGATTGGTACAATCAAGAATTTATGGGCAACCAATGTAGCTTTGGTGATGACAGGCATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CAA 90 bp ACGTCAAAACATGGAAGATCATACATCAAGCACCATGTCATATTGTaGTCCCTTCTTCCGCCTGCCACACTTATTGATGAGAACTACATA +
Preference number: 6 (lower is better)
Translates to: TSKHGRSYIKHHVIL*SLLPPATLIDENYI
Trigger: TATGTAGTTCTCATCAATAAGTGTGGCAGGCGGAAGAAGGGACAACAATATGACATGGTGCTTGATGTATGATCTTCCATGTTTTGACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CCA 72 bp ACCCAGCTTTGTTTATTGTTGCAATTGCAAACATCTTaGCGGGAAGTAAACTCGACATGTATAACACTGAGT +
Preference number: 6 (lower is better)
Translates to: TQLCLLLQLQTS*REVNSTCITLS
Trigger: ACTCAGTGTTATACATGTCGAGTTTACTTCCCGCCAAGATGTTTGCAATTGCAACAATAAACAAAGCTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS TCA 72 bp TCATCACCAAAGCTACATTGGTTGCCCATAAATTCTTaGTTGTACCAATCTTCCACAAACTCATGCAACAAG +
Preference number: 6 (lower is better)
Translates to: SSPKLHWLPINS*LYQSSTNSCNK
Trigger: CTTGTTGCATGAGTTTGTGGAAGATTGGTACAATCAAGAATTTATGGGCAACCAATGTAGCTTTGGTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CCA 72 bp ACTAAGGTGTTGTGTGTGACTGCAAACGTCAAAACATaGAAGATCATACATCAAGCACCATGTCATATTGTT +
Preference number: 6 (lower is better)
Translates to: TKVLCVTANVKT*KIIHQAPCHIV
Trigger: AACAATATGACATGGTGCTTGATGTATGATCTTCCATGTTTTGACGTTTGCAGTCACACACAACACCTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS CAA 72 bp GTCATCACCAAAGCTACATTGGTTGCCCATAAATTCTaGATTGTACCAATCTTCCACAAACTCATGCAACAA +
Preference number: 6 (lower is better)
Translates to: VITKATLVAHKF*IVPIFHKLMQQ
Trigger: TTGTTGCATGAGTTTGTGGAAGATTGGTACAATCAAGAATTTATGGGCAACCAATGTAGCTTTGGTGATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303924.5
CDS TCA 72 bp GAAAATCACACCACCCAGGAGGATTGTAAACCAAACTaGTACTGGAATGAGTCCTATGAAATTAACAACAAT +
Preference number: 6 (lower is better)
Translates to: ENHTTQEDCKPN*YWNESYEINNN
Trigger: ATTGTTGTTAATTTCATAGGACTCATTCCAGTATCAGTTTGGTTTACAATCCTCCTGGGTGGTGTGATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303924.5