Pregenerated sensors for H4-16 (Homo sapiens)
Ensembl gene IDs: ENSG00000197837Ensembl transcript IDs: ENST00000358064.3, ENST00000537853.1, ENST00000539745.1, ENST00000541592.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAGATCTAGCGGTGCGGAATCCTTCGCCAGCTGGGTTCCAATCTTaGCTCCAGTTCTTTAACCCCTGGGGCTGGGAAACTCCCTTAGAG | + |
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Preference number: 1 (lower is better) Translates to: QDLAVRNPSPAGFQS*LQFFNPWGWETPLE Trigger: CTCTAAGGGAGTTTCCCAGCCCCAGGGGTTAAAGAACTGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTCCGCACCGCTAGATCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR TCA 90 bp | TGTTCAGTTATTGAACCGTGTGACCCAGTTTTGGTTTGGAAGATATaGTTACTGTCAGGACTGGGTACTTACTATACCATAGGACTCAGA | + |
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Preference number: 1 (lower is better) Translates to: CSVIEPCDPVLVWKI*LLSGLGTYYTIGLR Trigger: TCTGAGTCCTATGGTATAGTAAGTACCCAGTCCTGACAGTAATCATATCTTCCAAACCAAAACTGGGTCACACGGTTCAATAACTGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR CCA 90 bp | GAAATTAAACTAACACCAGTATTGTGTACTCACTTGAAGTCTTTATaGAGTAGGAGAAAGTACTTAGAAATGACACGTCAGCAAAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: EIKLTPVLCTHLKSL*SRRKYLEMTRQQKG Trigger: TCCTTTTTGCTGACGTGTCATTTCTAAGTACTTTCTCCTACTCCATAAAGACTTCAAGTGAGTACACAATACTGGTGTTAGTTTAATTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR GCA 90 bp | GGAATCCTTCGCCAGCTGGGTTCCAATCTTGACTCCAGTTCTTTAACCCCTGGGGCGGAGGCGAGATCGTaGCACTGCACTCCAGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: GILRQLGSNLDSSSLTPGAEARS*HCTPAS Trigger: CGAGGCTGGAGTGCAGTGGCACGATCTCGCCTCCGC...CCCAGGGGTTAAAGAACTGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR TCA 90 bp | GGAATCCTTCGCCAGCTGGGTTCCAATCTTGACTCCAGTTCTTTAACCCCTGGGGAAACTCCCTTAGAGTaGCTTCAGCCCACCGCACCA | + |
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Preference number: 2 (lower is better) Translates to: GILRQLGSNLDSSSLTPGETPLE*LQPTAP Trigger: TGGTGCGGTGGGCTGAAGTCACTCTAAGGGAGTTTC...CCCAGGGGTTAAAGAACTGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR CCA 90 bp | GGAATCCTTCGCCAGCTGGGTTCCAATCTTGACTCCAGTTCTTTAACCCCTGGGCAAGACCAAGCGTGGTaGCTCACGCCTGAAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: GILRQLGSNLDSSSLTPGQDQAW*LTPEMP Trigger: TGGCATTTCAGGCGTGAGCCACCACGCTTGGTCTTG...CCCAGGGGTTAAAGAACTGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR TCA 90 bp | GGAATCCTTCGCCAGCTGGGTTCCAATCTTGACTCCAGTTCTTTAACCCCTGGGGCCTGGCCAACATGGTaGAACCCCGTATCTACCAAA | + |
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Preference number: 2 (lower is better) Translates to: GILRQLGSNLDSSSLTPGAWPTW*NPVSTK Trigger: TTTGGTAGATACGGGGTTTCACCATGTTGGCCAGGC...CCCAGGGGTTAAAGAACTGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR CCA 90 bp | GGAATCCTTCGCCAGCTGGGTTCCAATCTTGACTCCAGTTCTTTAACCCCTGGGAAAATTAGCCAGGCGTaGTGGCGCAGGCCTGTAATC | + |
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Preference number: 2 (lower is better) Translates to: GILRQLGSNLDSSSLTPGKISQA*WRRPVI Trigger: GATTACAGGCCTGCGCCACCACGCCTGGCTAATTTT...CCCAGGGGTTAAAGAACTGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGTCATGCAACAAATATCGAGGGCACGAAAGTATGCCAGACTCTATTTCTGCGAGATCGTGCCACTaGACTCCAGCCTCGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: IWSCNKYRGHESMPDSISARSCH*TPASVA Trigger: TGCCACCGAGGCTGGAGTGCAGTGGCACGATCTCGC...AGAAATAGAGTCTGGCATACTTTCGTGCCCTCGATATTTGTTGCATGACCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR CAA 90 bp | CCGCGAATATCCCATTTCCGGTATCCGGAAGGCGACATCAAAGGGTaGATATTTACCCGTTATCTAGGAAGTGTTAACAGCTCTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: PRISHFRYPEGDIKG*IFTRYLGSVNSSFC Trigger: ACAGAAAGAGCTGTTAACACTTCCTAGATAACGGGTAAATATCAACCCTTTGATGTCGCCTTCCGGATACCGGAAATGGGATATTCGCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539745.1 |
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| 3UTR-3UTR CCA 90 bp | AAAATCACTCATTTGGTCATGCAACAAATATCGAGGGCACGAAAGTATGCCAGAACAGGGGAGCCTTCCTaGCAGAAGAAGAGGCAAATG | + |
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Preference number: 2 (lower is better) Translates to: KITHLVMQQISRARKYARTGEPS*QKKRQM Trigger: CATTTGCCTCTTCTTCTGCCAGGAAGGCTCCCCTGT...TCTGGCATACTTTCGTGCCCTCGATATTTGTTGCATGACCAAATGAGTGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR CCA 90 bp | ATTGTCATACAAATATCTACAGTATTTCTATCCTCCATCGGGGCCCTAACTTTCCAGTTCTTTAACCCCTaGGGCTGGGAAACTCCCTTA | + |
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Preference number: 2 (lower is better) Translates to: IVIQISTVFLSSIGALTFQFFNP*GWETPL Trigger: TAAGGGAGTTTCCCAGCCCCAGGGGTTAAAGAACTG...GAAAGTTAGGGCCCCGATGGAGGATAGAAATACTGTAGATATTTGTATGACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR CCA 90 bp | GTTTTCAGTTTGAGATATTCTGTTCAGTTATTGAACCGTGTGACCCAGTTTTGGGAATCCTTCGCCAGCTaGGTTCCAATCTTGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: VFSLRYSVQLLNRVTQFWESFAS*VPILTP Trigger: TGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTC...CCAAAACTGGGTCACACGGTTCAATAACTGAACAGAATATCTCAAACTGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTTCAGTTTGAGATATTCTGTTCAGTTATTGAACCGTGTGACCCAGTTTTGGGAGGGCACGAAAGTATaGCAGACTCTATTTCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: VFSLRYSVQLLNRVTQFWEGTKV*QTLFLL Trigger: TAAAAGAAATAGAGTCTGGCATACTTTCGTGCCCTC...CCAAAACTGGGTCACACGGTTCAATAACTGAACAGAATATCTCAAACTGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR TCA 90 bp | GTTTTCAGTTTGAGATATTCTGTTCAGTTATTGAACCGTGTGACCCAGTTTTGGTGCATTAAAGAAAATTaGACTTCTCCGAGTGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: VFSLRYSVQLLNRVTQFWCIKEN*TSPSVS Trigger: TGAGACACTCGGAGAAGTTCAATTTTCTTTAATGCA...CCAAAACTGGGTCACACGGTTCAATAACTGAACAGAATATCTCAAACTGAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR CAA 90 bp | TTCTCCGAGTGTCTCACTGTCTTAGAAATTAAACTAACACCAGTATaGTGTACTCACTTGAAGTCTTTATGGAGTAGGAGAAAGTACTTA | + |
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Preference number: 2 (lower is better) Translates to: FSECLTVLEIKLTPV*CTHLKSLWSRRKYL Trigger: TAAGTACTTTCTCCTACTCCATAAAGACTTCAAGTGAGTACACAATACTGGTGTTAGTTTAATTTCTAAGACAGTGAGACACTCGGAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR CAA 90 bp | CTCACTGTCTTAGAAATTAAACTAACACCAGTATTGTGTACTCACTaGAAGTCTTTATGGAGTAGGAGAAAGTACTTAGAAATGACACGT | + |
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Preference number: 2 (lower is better) Translates to: LTVLEIKLTPVLCTH*KSLWSRRKYLEMTR Trigger: ACGTGTCATTTCTAAGTACTTTCTCCTACTCCATAAAGACTTCAAGTGAGTACACAATACTGGTGTTAGTTTAATTTCTAAGACAGTGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR CAA 90 bp | CAGGTGAATCGCTTGAACCCGGGAGGCGGAGGCGAGATCGTGCCACTGCACTCCTCTTTCTGTGACAGTTaGGGGGCCCTGAAAAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: QVNRLNPGGGGEIVPLHSSFCDS*GALKRA Trigger: GGCCCTTTTCAGGGCCCCCAAACTGTCACAGAAAGA...GGAGTGCAGTGGCACGATCTCGCCTCCGCCTCCCGGGTTCAAGCGATTCACCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR GCA 72 bp | TTCTCCCCGTGCCCGCCAAGTCTAATCCCGAGCAGATaGTCGGGCCGCGAATATCCCATTTCCGGTATCCGG | + |
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Preference number: 3 (lower is better) Translates to: FSPCPPSLIPSR*SGREYPISGIR Trigger: CCGGATACCGGAAATGGGATATTCGCGGCCCGAGCATCTGCTCGGGATTAGACTTGGCGGGCACGGGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539745.1 |
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| 3UTR TCA 72 bp | GCGGTGCGGAATCCTTCGCCAGCTGGGTTCCAATCTTaGCTCCAGTTCTTTAACCCCTGGGGCTGGGAAACT | + |
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Preference number: 3 (lower is better) Translates to: AVRNPSPAGFQS*LQFFNPWGWET Trigger: AGTTTCCCAGCCCCAGGGGTTAAAGAACTGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTCCGCACCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR TCA 72 bp | TTCTTTAACCCCTGGGGCTGGGAAACTCCCTTAGAGTaGCTTCAGCCCACCGCACCAAGGAAGCTATATGAC | + |
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Preference number: 3 (lower is better) Translates to: FFNPWGWETPLE*LQPTAPRKLYD Trigger: GTCATATAGCTTCCTTGGTGCGGTGGGCTGAAGTCACTCTAAGGGAGTTTCCCAGCCCCAGGGGTTAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR CAA 90 bp | TCCCATTTCCGGTATCCGGAAGGCGACATCAAAGGGTTGATATTTACCCGTTATTCTTTCTGTGACAGTTaGGGGGCCCTGAAAAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: SHFRYPEGDIKGLIFTRYSFCDS*GALKRA Trigger: GGCCCTTTTCAGGGCCCCCAAACTGTCACAGAAAGA...ATAACGGGTAAATATCAACCCTTTGATGTCGCCTTCCGGATACCGGAAATGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000539745.1 |
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| 3UTR CCA 72 bp | TATTCTGTTCAGTTATTGAACCGTGTGACCCAGTTTTaGTTTGGAAGATATGATTACTGTCAGGACTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: YSVQLLNRVTQF*FGRYDYCQDWV Trigger: TACCCAGTCCTGACAGTAATCATATCTTCCAAACCAAAACTGGGTCACACGGTTCAATAACTGAACAGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR-3UTR CAA 90 bp | GTTTTCAGTTTGAGATATTCTGTTCAGTTATTGAACCGTGTGACCCAGTTTTGGAAACTAACACCAGTATaGTGTACTCACTTGAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: VFSLRYSVQLLNRVTQFWKLTPV*CTHLKS Trigger: AGACTTCAAGTGAGTACACAATACTGGTGTTAGTTT...CCAAAACTGGGTCACACGGTTCAATAACTGAACAGAATATCTCAAACTGAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR CAA 72 bp | TCCCAGCTACTCCGGAAGCTGAGGCAGGTGAATCGCTaGAACCCGGGAGGCGGAGGCGAGATCGTGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: SQLLRKLRQVNR*NPGGGGEIVPL Trigger: CAGTGGCACGATCTCGCCTCCGCCTCCCGGGTTCAAGCGATTCACCTGCCTCAGCTTCCGGAGTAGCTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR TCA 90 bp | ATCCCGAGCAGATGCTCGGGCCGCGAATATCCCATTTCCGGTATCCGGAAGGCGTCTCCAGGAAGACTTTaGGGACTCCCCGGGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: IPSRCSGREYPISGIRKASPGRL*GLPGSP Trigger: AGGAGACCCGGGGAGTCCTCAAAGTCTTCCTGGAGA...CGCCTTCCGGATACCGGAAATGGGATATTCGCGGCCCGAGCATCTGCTCGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539745.1 |
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| CDS-3UTR GCA 90 bp | TGCCCGCCAAGTCTAATCCCGAGCAGATGCTCGGGCCGCGAATATCCCATTTCCCCTTACCCAGCCCCTTaGCACCTTTACCTCGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: CPPSLIPSRCSGREYPISPYPAP*HLYLAQ Trigger: CTGGGCGAGGTAAAGGTGGCAAGGGGCTGGGTAAGG...GGAAATGGGATATTCGCGGCCCGAGCATCTGCTCGGGATTAGACTTGGCGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000539745.1 |
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| CDS-3UTR GCA 90 bp | TCTAGCGGTGCGGAATCCTTCGCCAGCTGGGTTCCAATCTTGACTCCAGTTCTTGCGGAGGCGAGATCGTaGCACTGCACTCCAGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SSGAESFASWVPILTPVLAEARS*HCTPAS Trigger: CGAGGCTGGAGTGCAGTGGCACGATCTCGCCTCCGC...AAGAACTGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTCCGCACCGCTAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CCA 90 bp | CAGGTGAATCGCTTGAACCCGGGAGGCGGAGGCGAGATCGTGCCACTGCACTCCCAGTTCTTTAACCCCTaGGGCTGGGAAACTCCCTTA | + |
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Preference number: 4 (lower is better) Translates to: QVNRLNPGGGGEIVPLHSQFFNP*GWETPL Trigger: TAAGGGAGTTTCCCAGCCCCAGGGGTTAAAGAACTG...GGAGTGCAGTGGCACGATCTCGCCTCCGCCTCCCGGGTTCAAGCGATTCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CCA 90 bp | CAGGTGAATCGCTTGAACCCGGGAGGCGGAGGCGAGATCGTGCCACTGCACTCCGAATCCTTCGCCAGCTaGGTTCCAATCTTGACTCCA | + |
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Preference number: 4 (lower is better) Translates to: QVNRLNPGGGGEIVPLHSESFAS*VPILTP Trigger: TGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTC...GGAGTGCAGTGGCACGATCTCGCCTCCGCCTCCCGGGTTCAAGCGATTCACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CCA 90 bp | CAGGTGAATCGCTTGAACCCGGGAGGCGGAGGCGAGATCGTGCCACTGCACTCCGGGGTCTCACTATGTTaGCCATGCTGGTCTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: QVNRLNPGGGGEIVPLHSGVSLC*PCWSQT Trigger: AGTTTGAGACCAGCATGGCCAACATAGTGAGACCCC...GGAGTGCAGTGGCACGATCTCGCCTCCGCCTCCCGGGTTCAAGCGATTCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR GCA 90 bp | GATGCTCGGGCCGCGAATATCCCATTTCCGGTATCCGGAAGGCGACATCAAAGGCTAATCCCGAGCAGATaGTCGGGCCGCGAATATCCC | + |
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Preference number: 4 (lower is better) Translates to: DARAANIPFPVSGRRHQRLIPSR*SGREYP Trigger: GGGATATTCGCGGCCCGAGCATCTGCTCGGGATTAG...CCTTTGATGTCGCCTTCCGGATACCGGAAATGGGATATTCGCGGCCCGAGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539745.1 |
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| CDS-3UTR CCA 90 bp | GCTCGGGCCGCGAATATCCCATTTCCGGTATCCGGAAGGCGACATCAAAGGGTTTCTGTAGAGAAGCTGTaGGGACAGCTCAACCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: ARAANIPFPVSGRRHQRVSVEKL*GQLNRR Trigger: TCGGCGGTTGAGCTGTCCCCACAGCTTCTCTACAGA...AACCCTTTGATGTCGCCTTCCGGATACCGGAAATGGGATATTCGCGGCCCGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539745.1 |
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| CDS-3UTR TCA 90 bp | GATGCTCGGGCCGCGAATATCCCATTTCCGGTATCCGGAAGGCGACATCAAAGGCTCGCCCAGACATTCTaGAATCACAGCGCCTACTCA | + |
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Preference number: 4 (lower is better) Translates to: DARAANIPFPVSGRRHQRLAQTF*NHSAYS Trigger: TGAGTAGGCGCTGTGATTTCAGAATGTCTGGGCGAG...CCTTTGATGTCGCCTTCCGGATACCGGAAATGGGATATTCGCGGCCCGAGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539745.1 |
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| CDS-3UTR TCA 90 bp | CAGGTGAATCGCTTGAACCCGGGAGGCGGAGGCGAGATCGTGCCACTGCACTCCTTGGTTTGGAAGATATaGTTACTGTCAGGACTGGGT | + |
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Preference number: 4 (lower is better) Translates to: QVNRLNPGGGGEIVPLHSLVWKI*LLSGLG Trigger: ACCCAGTCCTGACAGTAATCATATCTTCCAAACCAA...GGAGTGCAGTGGCACGATCTCGCCTCCGCCTCCCGGGTTCAAGCGATTCACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR TCA 90 bp | TCTAGCGGTGCGGAATCCTTCGCCAGCTGGGTTCCAATCTTGACTCCAGTTCTTGCCTGGCCAACATGGTaGAACCCCGTATCTACCAAA | + |
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Preference number: 4 (lower is better) Translates to: SSGAESFASWVPILTPVLAWPTW*NPVSTK Trigger: TTTGGTAGATACGGGGTTTCACCATGTTGGCCAGGC...AAGAACTGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTCCGCACCGCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR TCA 90 bp | CAGGTGAATCGCTTGAACCCGGGAGGCGGAGGCGAGATCGTGCCACTGCACTCCTGCATTAAAGAAAATTaGACTTCTCCGAGTGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: QVNRLNPGGGGEIVPLHSCIKEN*TSPSVS Trigger: TGAGACACTCGGAGAAGTTCAATTTTCTTTAATGCA...GGAGTGCAGTGGCACGATCTCGCCTCCGCCTCCCGGGTTCAAGCGATTCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR TCA 90 bp | TCTAGCGGTGCGGAATCCTTCGCCAGCTGGGTTCCAATCTTGACTCCAGTTCTTGCTGGGTTCCAATCTTaGCTCCAGTTCTTTAACCCC | + |
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Preference number: 4 (lower is better) Translates to: SSGAESFASWVPILTPVLAGFQS*LQFFNP Trigger: GGGGTTAAAGAACTGGAGTCAAGATTGGAACCCAGC...AAGAACTGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTCCGCACCGCTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR GCA 90 bp | GTTTTCAGTTTGAGATATTCTGTTCAGTTATTGAACCGTGTGACCCAGTTTTGGGCGAGATCGTGCCACTaGACTCCAGCCTCGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: VFSLRYSVQLLNRVTQFWARSCH*TPASVA Trigger: TGCCACCGAGGCTGGAGTGCAGTGGCACGATCTCGC...CCAAAACTGGGTCACACGGTTCAATAACTGAACAGAATATCTCAAACTGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR GCA 90 bp | GTTTTCAGTTTGAGATATTCTGTTCAGTTATTGAACCGTGTGACCCAGTTTTGGCCTTACCCAGCCCCTTaGCACCTTTACCTCGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VFSLRYSVQLLNRVTQFWPYPAP*HLYLAQ Trigger: CTGGGCGAGGTAAAGGTGGCAAGGGGCTGGGTAAGG...CCAAAACTGGGTCACACGGTTCAATAACTGAACAGAATATCTCAAACTGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR GCA 90 bp | GGAATCCTTCGCCAGCTGGGTTCCAATCTTGACTCCAGTTCTTTAACCCCTGGGGAGGGCACGAAAGTATaGCAGACTCTATTTCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: GILRQLGSNLDSSSLTPGEGTKV*QTLFLL Trigger: TAAAAGAAATAGAGTCTGGCATACTTTCGTGCCCTC...CCCAGGGGTTAAAGAACTGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR TCA 90 bp | ATTGTCATACAAATATCTACAGTATTTCTATCCTCCATCGGGGCCCTAACTTTCTCTCCAGGAAGACTTTaGGGACTCCCCGGGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: IVIQISTVFLSSIGALTFSPGRL*GLPGSP Trigger: AGGAGACCCGGGGAGTCCTCAAAGTCTTCCTGGAGA...GAAAGTTAGGGCCCCGATGGAGGATAGAAATACTGTAGATATTTGTATGACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR TCA 90 bp | ATTTGGTCATGCAACAAATATCGAGGGCACGAAAGTATGCCAGACTCTATTTCTCTCGCCCAGACATTCTaGAATCACAGCGCCTACTCA | + |
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Preference number: 4 (lower is better) Translates to: IWSCNKYRGHESMPDSISLAQTF*NHSAYS Trigger: TGAGTAGGCGCTGTGATTTCAGAATGTCTGGGCGAG...AGAAATAGAGTCTGGCATACTTTCGTGCCCTCGATATTTGTTGCATGACCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR TCA 90 bp | ATTGTCATACAAATATCTACAGTATTTCTATCCTCCATCGGGGCCCTAACTTTCGAAACTCCCTTAGAGTaGCTTCAGCCCACCGCACCA | + |
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Preference number: 4 (lower is better) Translates to: IVIQISTVFLSSIGALTFETPLE*LQPTAP Trigger: TGGTGCGGTGGGCTGAAGTCACTCTAAGGGAGTTTC...GAAAGTTAGGGCCCCGATGGAGGATAGAAATACTGTAGATATTTGTATGACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CCA 90 bp | ATTGTCATACAAATATCTACAGTATTTCTATCCTCCATCGGGGCCCTAACTTTCTCTGTAGAGAAGCTGTaGGGACAGCTCAACCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: IVIQISTVFLSSIGALTFSVEKL*GQLNRR Trigger: TCGGCGGTTGAGCTGTCCCCACAGCTTCTCTACAGA...GAAAGTTAGGGCCCCGATGGAGGATAGAAATACTGTAGATATTTGTATGACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGTTTGAGATATTCTGTTCAGTTATTGAACCGTGTGACCCAGTTTTGGGAGCAAGACCAAGCGTaGTGGCTCACGCCTGAAATG | + |
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Preference number: 4 (lower is better) Translates to: VFSLRYSVQLLNRVTQFWEQDQA*WLTPEM Trigger: CATTTCAGGCGTGAGCCACCACGCTTGGTCTTGCTC...CCAAAACTGGGTCACACGGTTCAATAACTGAACAGAATATCTCAAACTGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CCA 90 bp | ATTTGGTCATGCAACAAATATCGAGGGCACGAAAGTATGCCAGACTCTATTTCTACAGGGGAGCCTTCCTaGCAGAAGAAGAGGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: IWSCNKYRGHESMPDSISTGEPS*QKKRQM Trigger: CATTTGCCTCTTCTTCTGCCAGGAAGGCTCCCCTGT...AGAAATAGAGTCTGGCATACTTTCGTGCCCTCGATATTTGTTGCATGACCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGTTTGAGATATTCTGTTCAGTTATTGAACCGTGTGACCCAGTTTTGGGCCTTCCCAAAGTGCTaGCATTATAGCCACCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VFSLRYSVQLLNRVTQFWAFPKC*HYSHPH Trigger: GTGGGGGTGGCTATAATGCCAGCACTTTGGGAAGGC...CCAAAACTGGGTCACACGGTTCAATAACTGAACAGAATATCTCAAACTGAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CCA 90 bp | GTTTTCAGTTTGAGATATTCTGTTCAGTTATTGAACCGTGTGACCCAGTTTTGGAAAATTAGCCAGGCGTaGTGGCGCAGGCCTGTAATC | + |
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Preference number: 4 (lower is better) Translates to: VFSLRYSVQLLNRVTQFWKISQA*WRRPVI Trigger: GATTACAGGCCTGCGCCACCACGCCTGGCTAATTTT...CCAAAACTGGGTCACACGGTTCAATAACTGAACAGAATATCTCAAACTGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CCA 90 bp | ATTTGGTCATGCAACAAATATCGAGGGCACGAAAGTATGCCAGACTCTATTTCTCGTGTGACCCAGTTTTaGTTTGGAAGATATGATTAC | + |
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Preference number: 4 (lower is better) Translates to: IWSCNKYRGHESMPDSISRVTQF*FGRYDY Trigger: GTAATCATATCTTCCAAACCAAAACTGGGTCACACG...AGAAATAGAGTCTGGCATACTTTCGTGCCCTCGATATTTGTTGCATGACCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CCA 90 bp | ATTGTCATACAAATATCTACAGTATTTCTATCCTCCATCGGGGCCCTAACTTTCCACTTGAAGTCTTTATaGAGTAGGAGAAAGTACTTA | + |
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Preference number: 4 (lower is better) Translates to: IVIQISTVFLSSIGALTFHLKSL*SRRKYL Trigger: TAAGTACTTTCTCCTACTCCATAAAGACTTCAAGTG...GAAAGTTAGGGCCCCGATGGAGGATAGAAATACTGTAGATATTTGTATGACAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| 3UTR CAA 72 bp | TTGATCGTTTTCAGTTTGAGATATTCTGTTCAGTTATaGAACCGTGTGACCCAGTTTTGGTTTGGAAGATAT | + |
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Preference number: 4 (lower is better) Translates to: LIVFSLRYSVQL*NRVTQFWFGRY Trigger: ATATCTTCCAAACCAAAACTGGGTCACACGGTTCAATAACTGAACAGAATATCTCAAACTGAAAACGATCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS GCA 90 bp | CCTGCAGGTGATCTGGCCTTTCATGCCGGCGTGACCCCCACTGCCTaGCTGCCAACTCCACGCCCGCCGCCAGGTGGCCGAGCAGGACGC | + |
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Preference number: 5 (lower is better) Translates to: PAGDLAFHAGVTPTA*LPTPRPPPGGRAGR Trigger: GCGTCCTGCTCGGCCACCTGGCGGCGGGCGTGGAGTTGGCAGGCAGGCAGTGGGGGTCACGCCGGCATGAAAGGCCAGATCACCTGCAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000537853.1 ENST00000541592.1 |
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| CDS CCA 90 bp | TGTGATGGGCATGACACTGCTCGGAGCGGGGGATTCCCGGCAACTTaGCGACCTGCAGGTGATCTGGCCTTTCATGCCGGCGTGACCCCC | + |
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Preference number: 5 (lower is better) Translates to: CDGHDTARSGGFPAT*RPAGDLAFHAGVTP Trigger: GGGGGTCACGCCGGCATGAAAGGCCAGATCACCTGCAGGTCGCCAAGTTGCCGGGAATCCCCCGCTCCGAGCAGTGTCATGCCCATCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000537853.1 ENST00000541592.1 |
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| CDS-3UTR CAA 90 bp | CAGGTGAATCGCTTGAACCCGGGAGGCGGAGGCGAGATCGTGCCACTGCACTCCCCCTTACCCAGCCCCTaGCCACCTTTACCTCGCCCA | + |
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Preference number: 5 (lower is better) Translates to: QVNRLNPGGGGEIVPLHSPLPSP*PPLPRP Trigger: TGGGCGAGGTAAAGGTGGCAAGGGGCTGGGTAAGGG...GGAGTGCAGTGGCACGATCTCGCCTCCGCCTCCCGGGTTCAAGCGATTCACCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CAA 90 bp | CAGGTGAATCGCTTGAACCCGGGAGGCGGAGGCGAGATCGTGCCACTGCACTCCTTCTCCAGGAAGACTTaGAGGACTCCCCGGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: QVNRLNPGGGGEIVPLHSFSRKT*RTPRVS Trigger: GGAGACCCGGGGAGTCCTCAAAGTCTTCCTGGAGAA...GGAGTGCAGTGGCACGATCTCGCCTCCGCCTCCCGGGTTCAAGCGATTCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CAA 90 bp | CTCGGGCCGCGAATATCCCATTTCCGGTATCCGGAAGGCGACATCAAAGGGTTGCCCTTACCCAGCCCCTaGCCACCTTTACCTCGCCCA | + |
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Preference number: 5 (lower is better) Translates to: LGPRISHFRYPEGDIKGLPLPSP*PPLPRP Trigger: TGGGCGAGGTAAAGGTGGCAAGGGGCTGGGTAAGGG...CAACCCTTTGATGTCGCCTTCCGGATACCGGAAATGGGATATTCGCGGCCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539745.1 |
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| CDS-3UTR CAA 90 bp | GGGCCGCGAATATCCCATTTCCGGTATCCGGAAGGCGACATCAAAGGGTTGATATTCTCCAGGAAGACTTaGAGGACTCCCCGGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: GPRISHFRYPEGDIKGLIFSRKT*RTPRVS Trigger: GGAGACCCGGGGAGTCCTCAAAGTCTTCCTGGAGAA...TATCAACCCTTTGATGTCGCCTTCCGGATACCGGAAATGGGATATTCGCGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539745.1 |
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| CDS TCA 90 bp | CGCAGGGTGTCGCGAGTTTCGCCCGGCCGCCTTAATCTCAGCATCTaGGCTTGGTCACCTCTCACTCAACGTCAGCGATTAAGTAAAATA | + |
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Preference number: 5 (lower is better) Translates to: RRVSRVSPGRLNLSI*AWSPLTQRQRLSKI Trigger: TATTTTACTTAATCGCTGACGTTGAGTGAGAGGTGACCAAGCTCAGATGCTGAGATTAAGGCGGCCGGGCGAAACTCGCGACACCCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537853.1 |
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| CDS-3UTR CAA 90 bp | CAGGTGAATCGCTTGAACCCGGGAGGCGGAGGCGAGATCGTGCCACTGCACTCCAAACTAACACCAGTATaGTGTACTCACTTGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: QVNRLNPGGGGEIVPLHSKLTPV*CTHLKS Trigger: AGACTTCAAGTGAGTACACAATACTGGTGTTAGTTT...GGAGTGCAGTGGCACGATCTCGCCTCCGCCTCCCGGGTTCAAGCGATTCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CAA 90 bp | AAAATCACTCATTTGGTCATGCAACAAATATCGAGGGCACGAAAGTATGCCAGATCTTTCTGTGACAGTTaGGGGGCCCTGAAAAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: KITHLVMQQISRARKYARSFCDS*GALKRA Trigger: GGCCCTTTTCAGGGCCCCCAAACTGTCACAGAAAGA...TCTGGCATACTTTCGTGCCCTCGATATTTGTTGCATGACCAAATGAGTGATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CAA 90 bp | GGAATCCTTCGCCAGCTGGGTTCCAATCTTGACTCCAGTTCTTTAACCCCTGGGTCAAAAGGGATGACTTaGCTACAGGATCAAATTTCA | + |
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Preference number: 5 (lower is better) Translates to: GILRQLGSNLDSSSLTPGSKGMT*LQDQIS Trigger: TGAAATTTGATCCTGTAGCAAAGTCATCCCTTTTGA...CCCAGGGGTTAAAGAACTGGAGTCAAGATTGGAACCCAGCTGGCGAAGGATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358064.3 |
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| CDS-3UTR CAA 90 bp | ATCCCATTTCCGGTATCCGGAAGGCGACATCAAAGGGTTGATATTTACCCGTTAGGCGACATCAAAGGGTaGATATTTACCCGTTATCTA | + |
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Preference number: 5 (lower is better) Translates to: IPFPVSGRRHQRVDIYPLGDIKG*IFTRYL Trigger: TAGATAACGGGTAAATATCAACCCTTTGATGTCGCC...TAACGGGTAAATATCAACCCTTTGATGTCGCCTTCCGGATACCGGAAATGGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539745.1 |
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| CDS GCA 72 bp | GATCTGGCCTTTCATGCCGGCGTGACCCCCACTGCCTaGCTGCCAACTCCACGCCCGCCGCCAGGTGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: DLAFHAGVTPTA*LPTPRPPPGGR Trigger: TCGGCCACCTGGCGGCGGGCGTGGAGTTGGCAGGCAGGCAGTGGGGGTCACGCCGGCATGAAAGGCCAGATC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000537853.1 ENST00000541592.1 |
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| CDS CCA 72 bp | CACTGCCTGCCTGCCAACTCCACGCCCGCCGCCAGGTaGCCGAGCAGGACGCTACCCGCTTGGCGTAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: HCLPANSTPAAR*PSRTLPAWRRQ Trigger: TTGCCTACGCCAAGCGGGTAGCGTCCTGCTCGGCCACCTGGCGGCGGGCGTGGAGTTGGCAGGCAGGCAGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000537853.1 ENST00000541592.1 |
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| CDS TCA 72 bp | GAGCGGGGGATTCCCGGCAACTTGGCGACCTGCAGGTaGTCTGGCCTTTCATGCCGGCGTGACCCCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: ERGIPGNLATCR*SGLSCRRDPHC Trigger: GCAGTGGGGGTCACGCCGGCATGAAAGGCCAGATCACCTGCAGGTCGCCAAGTTGCCGGGAATCCCCCGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000537853.1 ENST00000541592.1 |
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| CDS CCA 72 bp | CATGACACTGCTCGGAGCGGGGGATTCCCGGCAACTTaGCGACCTGCAGGTGATCTGGCCTTTCATGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: HDTARSGGFPAT*RPAGDLAFHAG Trigger: GCCGGCATGAAAGGCCAGATCACCTGCAGGTCGCCAAGTTGCCGGGAATCCCCCGCTCCGAGCAGTGTCATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000537853.1 ENST00000541592.1 |
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| CDS TCA 72 bp | CCAGCCCCTTGCCACCTTTACCTCGCCCAGACATTCTaGAATCACAGCGCCTACTCAGCAGAAAATCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PAPCHLYLAQTF*NHSAYSAENRA Trigger: AGCCCGATTTTCTGCTGAGTAGGCGCTGTGATTTCAGAATGTCTGGGCGAGGTAAAGGTGGCAAGGGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000358064.3 ENST00000539745.1 |
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| CDS TCA 72 bp | TCGCGAGTTTCGCCCGGCCGCCTTAATCTCAGCATCTaGGCTTGGTCACCTCTCACTCAACGTCAGCGATTA | + |
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Preference number: 6 (lower is better) Translates to: SRVSPGRLNLSI*AWSPLTQRQRL Trigger: TAATCGCTGACGTTGAGTGAGAGGTGACCAAGCTCAGATGCTGAGATTAAGGCGGCCGGGCGAAACTCGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537853.1 |
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