Pregenerated sensors for H2AP (Homo sapiens)
Ensembl gene IDs: ENSG00000187516Ensembl transcript IDs: ENST00000341016.5
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CCTTTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTCACTCTCAGCGCTGTaGGGCTCACGGTTGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: PLIALVDDNSRYSSAVTHSLSAL*GSRLLS Trigger: GGACAACAACCGTGAGCCCCACAGCGCTGAGAGTGA...ATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR TCA 90 bp | TTACATCCTTTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGAGCCTACCCGCTCCATaGTGTAGTCAGCAAGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: LHPLIALVDDNSRYSSAVSLPAP*CSQQGN Trigger: ATTGCCTTGCTGACTACATCATGGAGCGGGTAGGCT...CACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAAAGGATGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR GCA 90 bp | TTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTTTGCATACTGCCATTGTTaGTGGCCTCCAAGCCTACCC | + |
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Preference number: 4 (lower is better) Translates to: LIALVDDNSRYSSAVTHFAYCHC*WPPSLP Trigger: GGGTAGGCTTGGAGGCCAGCAACAATGGCAGTATGC...AAAATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR CCA 90 bp | TTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTTTTACTGCCATTGTTGCTaGCCTCCAAGCCTACCCGCT | + |
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Preference number: 4 (lower is better) Translates to: LIALVDDNSRYSSAVTHFYCHCC*PPSLPA Trigger: AGCGGGTAGGCTTGGAGGCCAGCAACAATGGCAGTA...AAAATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTTCCCTTCAAGGCTCTaGGACCCAGTCTTCAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: PLIALVDDNSRYSSAVTHFPSRL*DPVFSH Trigger: ATGACTGAAGACTGGGTCCCAGAGCCTTGAAGGGAA...ATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR GCA 90 bp | GATTTACATCCTTTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTACGTCTCGTTCATCTTaGACAACGCGGTCCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: DLHPLIALVDDNSRYSSATSRSS*TTRSTK Trigger: CTTCGTGGACCGCGTTGTGCAAGATGAACGAGACGT...AGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAAAGGATGTAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR CCA 90 bp | TTACATCCTTTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGGAGGAACTCTGGCTTTaGACGTCTCGTTCATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LHPLIALVDDNSRYSSAVEELWL*TSRSSC Trigger: GCAAGATGAACGAGACGTCCAAAGCCAGAGTTCCTC...CACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAAAGGATGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATATTGTGGAGGAACTCTaGCTTTGGACGTCTCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PLIALVDDNSRYSSAVTHIVEEL*LWTSRS Trigger: TGAACGAGACGTCCAAAGCCAGAGTTCCTCCACAAT...ATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR TCA 90 bp | TTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTTTTCTCTCCCTATCTTGTaGAGTGTTGCGCATACTGCC | + |
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Preference number: 4 (lower is better) Translates to: LIALVDDNSRYSSAVTHFSLPIL*SVAHTA Trigger: GGCAGTATGCGCAACACTTCACAAGATAGGGAGAGA...AAAATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR GCA 90 bp | TTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTTTAAGTGTTGCGCATACTaGCATTGTTGCTGGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LIALVDDNSRYSSAVTHFKCCAY*HCCWPP Trigger: TGGAGGCCAGCAACAATGGCAGTATGCGCAACACTT...AAAATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR GCA 90 bp | TTACATCCTTTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGTATCTTGTGAAGTGTTaGGCATACTGCCATTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LHPLIALVDDNSRYSSAVYLVKC*AYCHCC Trigger: GCAACAATGGCAGTATGCGCAACACTTCACAAGATA...CACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAAAGGATGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR TCA 90 bp | TTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTTTTTTCTAGAAGGGTCTTaGGTCTGGTTGTTATTTGTA | + |
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Preference number: 4 (lower is better) Translates to: LIALVDDNSRYSSAVTHFFLEGS*VWLLFV Trigger: TACAAATAACAACCAGACTCAAGACCCTTCTAGAAA...AAAATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAA 37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS TCA 90 bp | GCTGTGGGGCTCACGGTTGTTGTCCACTTCTCTCTCCCTATCTTGTaGAGTGTTGCGCATACTGCCATTGTTGCTGGCCTCCAAGCCTAC | + |
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Preference number: 5 (lower is better) Translates to: AVGLTVVVHFSLPIL*SVAHTAIVAGLQAY Trigger: GTAGGCTTGGAGGCCAGCAACAATGGCAGTATGCGCAACACTTCACAAGATAGGGAGAGAGAAGTGGACAACAACCGTGAGCCCCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CCA 90 bp | TCGAGCAAGGTAAGGAGGGTATTTATTGTGGAGGAACTCTGGCTTTaGACGTCTCGTTCATCTTGCACAACGCGGTCCACGAAGCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: SSKVRRVFIVEELWL*TSRSSCTTRSTKLL Trigger: TAGGAGCTTCGTGGACCGCGTTGTGCAAGATGAACGAGACGTCCAAAGCCAGAGTTCCTCCACAATAAATACCCTCCTTACCTTGCTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CCA 90 bp | AGGCAATCGAGCAAGGTAAGGAGGGTATTTATTGTGGAGGAACTCTaGCTTTGGACGTCTCGTTCATCTTGCACAACGCGGTCCACGAAG | + |
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Preference number: 5 (lower is better) Translates to: RQSSKVRRVFIVEEL*LWTSRSSCTTRSTK Trigger: CTTCGTGGACCGCGTTGTGCAAGATGAACGAGACGTCCAAAGCCAGAGTTCCTCCACAATAAATACCCTCCTTACCTTGCTCGATTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CCA 90 bp | CACATTTTTGCCCTGGCTAAGCCTGTGAGGTTCCCTTCAAGGCTCTaGGACCCAGTCTTCAGTCATTCTTCCTGGATTTGGGCATCTCAT | + |
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Preference number: 5 (lower is better) Translates to: HIFALAKPVRFPSRL*DPVFSHSSWIWASH Trigger: ATGAGATGCCCAAATCCAGGAAGAATGACTGAAGACTGGGTCCCAGAGCCTTGAAGGGAACCTCACAGGCTTAGCCAGGGCAAAAATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS GCA 90 bp | GTATTTATTGTGGAGGAACTCTGGCTTTGGACGTCTCGTTCATCTTaGACAACGCGGTCCACGAAGCTCCTAGGGACCTGTAGCTCATTT | + |
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Preference number: 5 (lower is better) Translates to: VFIVEELWLWTSRSS*TTRSTKLLGTCSSF Trigger: AAATGAGCTACAGGTCCCTAGGAGCTTCGTGGACCGCGTTGTGCAAGATGAACGAGACGTCCAAAGCCAGAGTTCCTCCACAATAAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CCA 90 bp | GGCATCTCATCAAACAAAAAGCGAGTCACATCACTCTCAGCGCTGTaGGGCTCACGGTTGTTGTCCACTTCTCTCTCCCTATCTTGTGAA | + |
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Preference number: 5 (lower is better) Translates to: GISSNKKRVTSLSAL*GSRLLSTSLSLSCE Trigger: TTCACAAGATAGGGAGAGAGAAGTGGACAACAACCGTGAGCCCCACAGCGCTGAGAGTGATGTGACTCGCTTTTTGTTTGATGAGATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CCA 90 bp | CCTTCAAGGCTCTGGGACCCAGTCTTCAGTCATTCTTCCTGGATTTaGGCATCTCATCAAACAAAAAGCGAGTCACATCACTCTCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: PSRLWDPVFSHSSWI*ASHQTKSESHHSQR Trigger: GCGCTGAGAGTGATGTGACTCGCTTTTTGTTTGATGAGATGCCCAAATCCAGGAAGAATGACTGAAGACTGGGTCCCAGAGCCTTGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CCA 90 bp | AGGTTCCCTTCAAGGCTCTGGGACCCAGTCTTCAGTCATTCTTCCTaGATTTGGGCATCTCATCAAACAAAAAGCGAGTCACATCACTCT | + |
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Preference number: 5 (lower is better) Translates to: RFPSRLWDPVFSHSS*IWASHQTKSESHHS Trigger: AGAGTGATGTGACTCGCTTTTTGTTTGATGAGATGCCCAAATCCAGGAAGAATGACTGAAGACTGGGTCCCAGAGCCTTGAAGGGAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR CAA 90 bp | CCTTTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATCGCATACTGCCATTGTaGCTGGCCTCCAAGCCTACC | + |
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Preference number: 5 (lower is better) Translates to: PLIALVDDNSRYSSAVTHRILPL*LASKPT Trigger: GGTAGGCTTGGAGGCCAGCAACAATGGCAGTATGCG...ATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR CAA 90 bp | CCTTTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATCTGTGGGGCTCACGGTaGTTGTCCACTTCTCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: PLIALVDDNSRYSSAVTHLWGSR*LSTSLS Trigger: GGAGAGAGAAGTGGACAACAACCGTGAGCCCCACAG...ATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR CAA 90 bp | CCTTTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTTGCGCATACTGCCATaGTTGCTGGCCTCCAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: PLIALVDDNSRYSSAVTHLRILP*LLASKP Trigger: AGGCTTGGAGGCCAGCAACAATGGCAGTATGCGCAA...ATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR CAA 90 bp | CCTTTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTGGGGCTCACGGTTGTaGTCCACTTCTCTCTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: PLIALVDDNSRYSSAVTHWGSRL*STSLSL Trigger: TAGGGAGAGAGAAGTGGACAACAACCGTGAGCCCCA...ATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR CAA 90 bp | TTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTTTGACGTCTCGTTCATCTaGCACAACGCGGTCCACGAA | + |
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Preference number: 5 (lower is better) Translates to: LIALVDDNSRYSSAVTHFDVSFI*HNAVHE Trigger: TTCGTGGACCGCGTTGTGCAAGATGAACGAGACGTC...AAAATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS TCA 90 bp | TCCACGAAGCTCCTAGGGACCTGTAGCTCATTTCTAGAAGGGTCTTaGGTCTGGTTGTTATTTGTAGACGAGTTCTTACAGTTCTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: STKLLGTCSSFLEGS*VWLLFVDEFLQFFF Trigger: GAAAAAGAACTGTAAGAACTCGTCTACAAATAACAACCAGACTCAAGACCCTTCTAGAAATGAGCTACAGGTCCCTAGGAGCTTCGTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR CAA 90 bp | TTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTTTGGAGGAACTCTGGCTTaGGACGTCTCGTTCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: LIALVDDNSRYSSAVTHFGGTLA*DVSFIL Trigger: CAAGATGAACGAGACGTCCAAAGCCAGAGTTCCTCC...AAAATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR CAA 90 bp | TTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTTTCTATCTTGTGAAGTGTaGCGCATACTGCCATTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LIALVDDNSRYSSAVTHFLSCEV*RILPLL Trigger: CAACAATGGCAGTATGCGCAACACTTCACAAGATAG...AAAATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS-3UTR CAA 90 bp | CCTTTAATAGCACTTGTTGATGACAACAGCAGATATTCCTCAGCTGTGACACATTCATTCTTCCTGGATTaGGGCATCTCATCAAACAAA | + |
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Preference number: 5 (lower is better) Translates to: PLIALVDDNSRYSSAVTHSFFLD*GISSNK Trigger: TTTGTTTGATGAGATGCCCAAATCCAGGAAGAATGA...ATGTGTCACAGCTGAGGAATATCTGCTGTTGTCATCAACAAGTGCTATTAAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS GCA 72 bp | GTGGAGGAACTCTGGCTTTGGACGTCTCGTTCATCTTaGACAACGCGGTCCACGAAGCTCCTAGGGACCTGT | + |
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Preference number: 6 (lower is better) Translates to: VEELWLWTSRSS*TTRSTKLLGTC Trigger: ACAGGTCCCTAGGAGCTTCGTGGACCGCGTTGTGCAAGATGAACGAGACGTCCAAAGCCAGAGTTCCTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CAA 72 bp | TGTGGAGGAACTCTGGCTTTGGACGTCTCGTTCATCTaGCACAACGCGGTCCACGAAGCTCCTAGGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: CGGTLALDVSFI*HNAVHEAPRDL Trigger: CAGGTCCCTAGGAGCTTCGTGGACCGCGTTGTGCAAGATGAACGAGACGTCCAAAGCCAGAGTTCCTCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CAA 90 bp | GGCTCACGGTTGTTGTCCACTTCTCTCTCCCTATCTTGTGAAGTGTaGCGCATACTGCCATTGTTGCTGGCCTCCAAGCCTACCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSRLLSTSLSLSCEV*RILPLLLASKPTRS Trigger: GGAGCGGGTAGGCTTGGAGGCCAGCAACAATGGCAGTATGCGCAACACTTCACAAGATAGGGAGAGAGAAGTGGACAACAACCGTGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CCA 72 bp | GCCCTGGCTAAGCCTGTGAGGTTCCCTTCAAGGCTCTaGGACCCAGTCTTCAGTCATTCTTCCTGGATTTGG | + |
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Preference number: 6 (lower is better) Translates to: ALAKPVRFPSRL*DPVFSHSSWIW Trigger: CCAAATCCAGGAAGAATGACTGAAGACTGGGTCCCAGAGCCTTGAAGGGAACCTCACAGGCTTAGCCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CAA 72 bp | CTCTCCCTATCTTGTGAAGTGTTGCGCATACTGCCATaGTTGCTGGCCTCCAAGCCTACCCGCTCCATGATG | + |
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Preference number: 6 (lower is better) Translates to: LSLSCEVLRILP*LLASKPTRSMM Trigger: CATCATGGAGCGGGTAGGCTTGGAGGCCAGCAACAATGGCAGTATGCGCAACACTTCACAAGATAGGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CAA 72 bp | CGAGTCACATCACTCTCAGCGCTGTGGGGCTCACGGTaGTTGTCCACTTCTCTCTCCCTATCTTGTGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: RVTSLSALWGSR*LSTSLSLSCEV Trigger: CACTTCACAAGATAGGGAGAGAGAAGTGGACAACAACCGTGAGCCCCACAGCGCTGAGAGTGATGTGACTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CAA 90 bp | ATCGAGCAAGGTAAGGAGGGTATTTATTGTGGAGGAACTCTGGCTTaGGACGTCTCGTTCATCTTGCACAACGCGGTCCACGAAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: IEQGKEGIYCGGTLA*DVSFILHNAVHEAP Trigger: AGGAGCTTCGTGGACCGCGTTGTGCAAGATGAACGAGACGTCCAAAGCCAGAGTTCCTCCACAATAAATACCCTCCTTACCTTGCTCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CAA 90 bp | AAAAAGCGAGTCACATCACTCTCAGCGCTGTGGGGCTCACGGTTGTaGTCCACTTCTCTCTCCCTATCTTGTGAAGTGTTGCGCATACTG | + |
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Preference number: 6 (lower is better) Translates to: KKRVTSLSALWGSRL*STSLSLSCEVLRIL Trigger: CAGTATGCGCAACACTTCACAAGATAGGGAGAGAGAAGTGGACAACAACCGTGAGCCCCACAGCGCTGAGAGTGATGTGACTCGCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS TCA 72 bp | CTCACGGTTGTTGTCCACTTCTCTCTCCCTATCTTGTaGAGTGTTGCGCATACTGCCATTGTTGCTGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LTVVVHFSLPIL*SVAHTAIVAGL Trigger: GAGGCCAGCAACAATGGCAGTATGCGCAACACTTCACAAGATAGGGAGAGAGAAGTGGACAACAACCGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CCA 72 bp | GTAAGGAGGGTATTTATTGTGGAGGAACTCTGGCTTTaGACGTCTCGTTCATCTTGCACAACGCGGTCCACG | + |
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Preference number: 6 (lower is better) Translates to: VRRVFIVEELWL*TSRSSCTTRST Trigger: CGTGGACCGCGTTGTGCAAGATGAACGAGACGTCCAAAGCCAGAGTTCCTCCACAATAAATACCCTCCTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CCA 72 bp | TCAAACAAAAAGCGAGTCACATCACTCTCAGCGCTGTaGGGCTCACGGTTGTTGTCCACTTCTCTCTCCCTA | + |
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Preference number: 6 (lower is better) Translates to: SNKKRVTSLSAL*GSRLLSTSLSL Trigger: TAGGGAGAGAGAAGTGGACAACAACCGTGAGCCCCACAGCGCTGAGAGTGATGTGACTCGCTTTTTGTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CAA 72 bp | GGTAAGGAGGGTATTTATTGTGGAGGAACTCTGGCTTaGGACGTCTCGTTCATCTTGCACAACGCGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GKEGIYCGGTLA*DVSFILHNAVH Trigger: GTGGACCGCGTTGTGCAAGATGAACGAGACGTCCAAAGCCAGAGTTCCTCCACAATAAATACCCTCCTTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CAA 90 bp | AACAAAAAGCGAGTCACATCACTCTCAGCGCTGTGGGGCTCACGGTaGTTGTCCACTTCTCTCTCCCTATCTTGTGAAGTGTTGCGCATA | + |
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Preference number: 6 (lower is better) Translates to: NKKRVTSLSALWGSR*LSTSLSLSCEVLRI Trigger: TATGCGCAACACTTCACAAGATAGGGAGAGAGAAGTGGACAACAACCGTGAGCCCCACAGCGCTGAGAGTGATGTGACTCGCTTTTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CAA 90 bp | CCCTTCAAGGCTCTGGGACCCAGTCTTCAGTCATTCTTCCTGGATTaGGGCATCTCATCAAACAAAAAGCGAGTCACATCACTCTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: PFKALGPSLQSFFLD*GISSNKKRVTSLSA Trigger: CGCTGAGAGTGATGTGACTCGCTTTTTGTTTGATGAGATGCCCAAATCCAGGAAGAATGACTGAAGACTGGGTCCCAGAGCCTTGAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS CCA 72 bp | AGCAAGGTAAGGAGGGTATTTATTGTGGAGGAACTCTaGCTTTGGACGTCTCGTTCATCTTGCACAACGCGG | + |
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Preference number: 6 (lower is better) Translates to: SKVRRVFIVEEL*LWTSRSSCTTR Trigger: CCGCGTTGTGCAAGATGAACGAGACGTCCAAAGCCAGAGTTCCTCCACAATAAATACCCTCCTTACCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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| CDS TCA 72 bp | CTCCTAGGGACCTGTAGCTCATTTCTAGAAGGGTCTTaGGTCTGGTTGTTATTTGTAGACGAGTTCTTACAG | + |
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Preference number: 6 (lower is better) Translates to: LLGTCSSFLEGS*VWLLFVDEFLQ Trigger: CTGTAAGAACTCGTCTACAAATAACAACCAGACTCAAGACCCTTCTAGAAATGAGCTACAGGTCCCTAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341016.5 |
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