Pregenerated sensors for H1-0 (Homo sapiens)
Ensembl gene IDs: ENSG00000189060Ensembl transcript IDs: ENST00000340857.3, ENST00000340857.4
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCCTCCTTCCTTTGCCGGCTGGCTGCTCCCTACCACCTCTCTCCTaGTGGCCAAAGGTTCTGAAACTCTCACAACGGGTGCCCAACTCA | + |
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Preference number: 1 (lower is better) Translates to: PLLPLPAGCSLPPLS*WPKVLKLSQRVPNS Trigger: TGAGTTGGGCACCCGTTGTGAGAGTTTCAGAACCTTTGGCCAGCAGGAGAGAGGTGGTAGGGAGCAGCCAGCCGGCAAAGGAAGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR CCA 90 bp | TTGCTGAAGCCACAAAGATCCCCCAATGGCTACATCCTAGCTGACTaGGAGAAACTATGGCTTCTCCCATCCAGCTGTCACTTGGACCCC | + |
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Preference number: 1 (lower is better) Translates to: LLKPQRSPNGYILAD*EKLWLLPSSCHLDP Trigger: GGGGTCCAAGTGACAGCTGGATGGGAGAAGCCATAGTTTCTCCCAGTCAGCTAGGATGTAGCCATTGGGGGATCTTTGTGGCTTCAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR GCA 90 bp | CACAGATCTAGCTCTGTAAAACTACTTAGCAAATCCCAAATCGACTaGAGTAAGTCTTACTATCCACTGCCCGCCCACTCCCCCTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: HRSSSVKLLSKSQID*SKSYYPLPAHSPSP Trigger: GGGGGAGGGGGAGTGGGCGGGCAGTGGATAGTAAGACTTACTGCAGTCGATTTGGGATTTGCTAAGTAGTTTTACAGAGCTAGATCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR TCA 90 bp | GAATTTGCTGAAGCCACAAAGATCCCCCAATGGCTACATCCTAGCTaGCTGGGAGAAACTATGGCTTCTCCCATCCAGCTGTCACTTGGA | + |
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Preference number: 1 (lower is better) Translates to: EFAEATKIPQWLHPS*LGETMASPIQLSLG Trigger: TCCAAGTGACAGCTGGATGGGAGAAGCCATAGTTTCTCCCAGTCAGCTAGGATGTAGCCATTGGGGGATCTTTGTGGCTTCAGCAAATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR-3UTR GCA 90 bp | AAACTGGGTTTGGGCCCCCACTGCTCACCACTGGGAGGTGGAAGTCAGCCCGGTCCTTTGCCGGCTGGCTaGTCCCTACCACCTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: KLGLGPHCSPLGGGSQPGPLPAG*SLPPLS Trigger: GGAGAGAGGTGGTAGGGAGCAGCCAGCCGGCAAAGG...ACCGGGCTGACTTCCACCTCCCAGTGGTGAGCAGTGGGGGCCCAAACCCAGTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR-3UTR GCA 90 bp | AAACTGGGTTTGGGCCCCCACTGCTCACCACTGGGAGGTGGAAGTCAGCCCGGTAACTCTCACAACGGGTaGCCAACTCAAAGAAAACTC | + |
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Preference number: 2 (lower is better) Translates to: KLGLGPHCSPLGGGSQPGNSHNG*PTQRKL Trigger: GAGTTTTCTTTGAGTTGGGCACCCGTTGTGAGAGTT...ACCGGGCTGACTTCCACCTCCCAGTGGTGAGCAGTGGGGGCCCAAACCCAGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR-3UTR TCA 90 bp | GTGGAAAAACCTAAGTTTCAACAGGGCACACTGAGGCACTTGGCTGACTCCCCAGCTGGCCAAAGGTTCTaGAACTCTCACAACGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: VEKPKFQQGTLRHLADSPAGQRF*NSHNGC Trigger: GCACCCGTTGTGAGAGTTTCAGAACCTTTGGCCAGC...TGGGGAGTCAGCCAAGTGCCTCAGTGTGCCCTGTTGAAACTTAGGTTTTTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR-3UTR CCA 90 bp | TTTAAGTGGCCGCAGCCCCACCAAACCAAGCAAAGACACCTCTTGTACAGGAGGGACTGGGAGAAACTATaGCTTCTCCCATCCAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: FKWPQPHQTKQRHLLYRRDWEKL*LLPSSC Trigger: ACAGCTGGATGGGAGAAGCCATAGTTTCTCCCAGTC...CCTCCTGTACAAGAGGTGTCTTTGCTTGGTTTGGTGGGGCTGCGGCCACTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR-3UTR GCA 90 bp | GATTGCGTGGAAAAACCTAAGTTTCAACAGGGCACACTGAGGCACTTGGCTGACCTACCACCTCTCTCCTaGTGGCCAAAGGTTCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: DCVEKPKFQQGTLRHLADLPPLS*WPKVLK Trigger: TTTCAGAACCTTTGGCCAGCAGGAGAGAGGTGGTAG...GTCAGCCAAGTGCCTCAGTGTGCCCTGTTGAAACTTAGGTTTTTCCACGCAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR-3UTR CCA 90 bp | TCCATCGATTGCGTGGAAAAACCTAAGTTTCAACAGGGCACACTGAGGCACTTGCCACATCTACCTTCATaGCAAACAAGCCAACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: SIDCVEKPKFQQGTLRHLPHLPS*QTSQQN Trigger: GTTTTGTTGGCTTGTTTGCCATGAAGGTAGATGTGG...CAAGTGCCTCAGTGTGCCCTGTTGAAACTTAGGTTTTTCCACGCAATCGATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGCTAACCTCACAATTCCTGGGTTCCCTCTCATCTAGCCAGAACAAACTGTTCTCATCATTAGATTaGTTGTTGCTGTCCTTGCAC | + |
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Preference number: 2 (lower is better) Translates to: FLLTSQFLGSLSSSQNKLFSSLD*LLLSLH Trigger: GTGCAAGGACAGCAACAACCAATCTAATGATGAGAA...CAGTTTGTTCTGGCTAGATGAGAGGGAACCCAGGAATTGTGAGGTTAGCAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR-3UTR GCA 90 bp | AAACTACTTAGCAAATCCCAAATCGACTGCAGTAAGTCTTACTATCCACTGCCCACACAATCCATCGATTaGGTGGAAAAACCTAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: KLLSKSQIDCSKSYYPLPTQSID*VEKPKF Trigger: AAACTTAGGTTTTTCCACGCAATCGATGGATTGTGT...GGGCAGTGGATAGTAAGACTTACTGCAGTCGATTTGGGATTTGCTAAGTAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR GCA 72 bp | CCTTTGCCGGCTGGCTGCTCCCTACCACCTCTCTCCTaGTGGCCAAAGGTTCTGAAACTCTCACAACGGGTG | + |
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Preference number: 3 (lower is better) Translates to: PLPAGCSLPPLS*WPKVLKLSQRV Trigger: CACCCGTTGTGAGAGTTTCAGAACCTTTGGCCAGCAGGAGAGAGGTGGTAGGGAGCAGCCAGCCGGCAAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR CCA 72 bp | CCCAATGGCTACATCCTAGCTGACTGGGAGAAACTATaGCTTCTCCCATCCAGCTGTCACTTGGACCCCACT | + |
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Preference number: 3 (lower is better) Translates to: PNGYILADWEKL*LLPSSCHLDPT Trigger: AGTGGGGTCCAAGTGACAGCTGGATGGGAGAAGCCATAGTTTCTCCCAGTCAGCTAGGATGTAGCCATTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR TCA 72 bp | GCTCCCTACCACCTCTCTCCTGCTGGCCAAAGGTTCTaGAACTCTCACAACGGGTGCCCAACTCAAAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: APYHLSPAGQRF*NSHNGCPTQRK Trigger: TTTTCTTTGAGTTGGGCACCCGTTGTGAGAGTTTCAGAACCTTTGGCCAGCAGGAGAGAGGTGGTAGGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR TCA 72 bp | GAAGCCACAAAGATCCCCCAATGGCTACATCCTAGCTaGCTGGGAGAAACTATGGCTTCTCCCATCCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: EATKIPQWLHPS*LGETMASPIQL Trigger: CAGCTGGATGGGAGAAGCCATAGTTTCTCCCAGTCAGCTAGGATGTAGCCATTGGGGGATCTTTGTGGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR CCA 72 bp | CCACAAAGATCCCCCAATGGCTACATCCTAGCTGACTaGGAGAAACTATGGCTTCTCCCATCCAGCTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: PQRSPNGYILAD*EKLWLLPSSCH Trigger: GTGACAGCTGGATGGGAGAAGCCATAGTTTCTCCCAGTCAGCTAGGATGTAGCCATTGGGGGATCTTTGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR-3UTR CAA 90 bp | TCCATCGATTGCGTGGAAAAACCTAAGTTTCAACAGGGCACACTGAGGCACTTGAGAAGGAAACTGGGTTaGGGCCCCCACTGCTCACCA | + |
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Preference number: 3 (lower is better) Translates to: SIDCVEKPKFQQGTLRHLRRKLG*GPHCSP Trigger: TGGTGAGCAGTGGGGGCCCAAACCCAGTTTCCTTCT...CAAGTGCCTCAGTGTGCCCTGTTGAAACTTAGGTTTTTCCACGCAATCGATGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR-3UTR CAA 90 bp | GTGGAAAAACCTAAGTTTCAACAGGGCACACTGAGGCACTTGGCTGACTCCCCATCATTAGATTGGTTGTaGCTGTCCTTGCACAACTGG | + |
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Preference number: 3 (lower is better) Translates to: VEKPKFQQGTLRHLADSPSLDWL*LSLHNW Trigger: CCAGTTGTGCAAGGACAGCAACAACCAATCTAATGA...TGGGGAGTCAGCCAAGTGCCTCAGTGTGCCCTGTTGAAACTTAGGTTTTTCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR-3UTR CAA 90 bp | TTCCTGCTAACCTCACAATTCCTGGGTTCCCTCTCATCTAGCCAGAACAAACTGTGGTTGTTGCTGTCCTaGCACAACTGGTTAAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: FLLTSQFLGSLSSSQNKLWLLLS*HNWLRK Trigger: TTTCCTTAACCAGTTGTGCAAGGACAGCAACAACCA...CAGTTTGTTCTGGCTAGATGAGAGGGAACCCAGGAATTGTGAGGTTAGCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR GCA 72 bp | AGCTCTGTAAAACTACTTAGCAAATCCCAAATCGACTaGAGTAAGTCTTACTATCCACTGCCCGCCCACTCC | + |
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Preference number: 3 (lower is better) Translates to: SSVKLLSKSQID*SKSYYPLPAHS Trigger: GGAGTGGGCGGGCAGTGGATAGTAAGACTTACTGCAGTCGATTTGGGATTTGCTAAGTAGTTTTACAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| 3UTR CCA 72 bp | GCAAAACAAAATATAAGTACATTCTCATCATTAGATTaGTTGTTGCTGTCCTTGCACAACTGGTTAAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: AKQNISTFSSLD*LLLSLHNWLRK Trigger: TTTCCTTAACCAGTTGTGCAAGGACAGCAACAACCAATCTAATGATGAGAATGTACTTATATTTTGTTTTGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.3 |
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| CDS GCA 90 bp | TTTCCTCCCCGGCTCGGGTGTCGGGAGAGCTCGCCGAGCCGGCTTTaGGAGGCCCAGCCCCGCCGGTCTGTCGCTTGGTCTCGGCACCGG | + |
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Preference number: 5 (lower is better) Translates to: FPPRLGCRESSPSRL*EAQPRRSVAWSRHR Trigger: CCGGTGCCGAGACCAAGCGACAGACCGGCGGGGCTGGGCCTCGCAAAGCCGGCTCGGCGAGCTCTCCCGACACCCGAGCCGGGGAGGAAA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS GCA 90 bp | AGCCCCGCCGGTCTGTCGCTTGGTCTCGGCACCGGGCTCGGGCTCTaGCTCTGCCTCTGCCTCTGCCTCCGCCTCCTCTGCCTCCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SPAGLSLGLGTGLGL*LCLCLCLRLLCLPF Trigger: AAAAGGGAGGCAGAGGAGGCGGAGGCAGAGGCAGAGGCAGAGGCAGAGCCCGAGCCCGGTGCCGAGACCAAGCGACAGACCGGCGGGGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS TCA 90 bp | TCGGAGGCTGAGCAAAGCCTGCCTCGGGATCTGCTCCTGAGCCCCTaGCTACCGGGCCAGTCTGGAGTGCGGCTCCCGGGGATGCGAGCG | + |
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Preference number: 5 (lower is better) Translates to: SEAEQSLPRDLLLSP*LPGQSGVRLPGMRA Trigger: CGCTCGCATCCCCGGGAGCCGCACTCCAGACTGGCCCGGTAGTCAGGGGCTCAGGAGCAGATCCCGAGGCAGGCTTTGCTCAGCCTCCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS TCA 90 bp | AGCCCTCGTCGGAGGCTGAGCAAAGCCTGCCTCGGGATCTGCTCCTaGGCCCCTGACTACCGGGCCAGTCTGGAGTGCGGCTCCCGGGGA | + |
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Preference number: 5 (lower is better) Translates to: SPRRRLSKACLGICS*APDYRASLECGSRG Trigger: TCCCCGGGAGCCGCACTCCAGACTGGCCCGGTAGTCAGGGGCTCAGGAGCAGATCCCGAGGCAGGCTTTGCTCAGCCTCCGACGAGGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS TCA 90 bp | CGGCTGTTGAAGGCGCCTTCCAAAGGGCCAGCCCTCGTCGGAGGCTaGGCAAAGCCTGCCTCGGGATCTGCTCCTGAGCCCCTGACTACC | + |
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Preference number: 5 (lower is better) Translates to: RLLKAPSKGPALVGG*AKPASGSAPEPLTT Trigger: GGTAGTCAGGGGCTCAGGAGCAGATCCCGAGGCAGGCTTTGCTCAGCCTCCGACGAGGGCTGGCCCTTTGGAAGGCGCCTTCAACAGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS TCA 90 bp | CGGACGTGGAATTCTCGGTCATGGTGGCCTGTCTGGTCCGGCTGTTaGAGGCGCCTTCCAAAGGGCCAGCCCTCGTCGGAGGCTGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: RTWNSRSWWPVWSGC*RRLPKGQPSSEAEQ Trigger: TTGCTCAGCCTCCGACGAGGGCTGGCCCTTTGGAAGGCGCCTTCAACAGCCGGACCAGACAGGCCACCATGACCGAGAATTCCACGTCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 90 bp | CAGCCACGATCATGTCTGAATACTTGGGGTGGTCTGTGGACTTCTTaGAGGCCTTGGCCCGCTTGGGCTTGGCCGCAGGGGCGGACGTGG | + |
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Preference number: 5 (lower is better) Translates to: QPRSCLNTWGGLWTS*RPWPAWAWPQGRTW Trigger: CCACGTCCGCCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGATCGTGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 90 bp | AATACTTGGGGTGGTCTGTGGACTTCTTGGAGGCCTTGGCCCGCTTaGGCTTGGCCGCAGGGGCGGACGTGGAATTCTCGGTCATGGTGG | + |
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Preference number: 5 (lower is better) Translates to: NTWGGLWTSWRPWPA*AWPQGRTWNSRSWW Trigger: CCACCATGACCGAGAATTCCACGTCCGCCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 90 bp | CCTGGATGGCAGCCACGATCATGTCTGAATACTTGGGGTGGTCTGTaGACTTCTTGGAGGCCTTGGCCCGCTTGGGCTTGGCCGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: PGWQPRSCLNTWGGL*TSWRPWPAWAWPQG Trigger: CCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGATCGTGGCTGCCATCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS TCA 90 bp | GCCAGCGCGGTTCTTCTCGGCCTGGATGGCAGCCACGATCATGTCTaGATACTTGGGGTGGTCTGTGGACTTCTTGGAGGCCTTGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: ASAVLLGLDGSHDHV*ILGVVCGLLGGLGP Trigger: CGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGATCGTGGCTGCCATCCAGGCCGAGAAGAACCGCGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 90 bp | TCATGTCTGAATACTTGGGGTGGTCTGTGGACTTCTTGGAGGCCTTaGCCCGCTTGGGCTTGGCCGCAGGGGCGGACGTGGAATTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: SCLNTWGGLWTSWRP*PAWAWPQGRTWNSR Trigger: CCGAGAATTCCACGTCCGCCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 90 bp | TTCTCGGCCTGGATGGCAGCCACGATCATGTCTGAATACTTGGGGTaGTCTGTGGACTTCTTGGAGGCCTTGGCCCGCTTGGGCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: FSAWMAATIMSEYLG*SVDFLEALARLGLA Trigger: GGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGATCGTGGCTGCCATCCAGGCCGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 90 bp | GAATGGACTGGCGCGAGGAGCCAGCGCGGTTCTTCTCGGCCTGGATaGCAGCCACGATCATGTCTGAATACTTGGGGTGGTCTGTGGACT | + |
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Preference number: 5 (lower is better) Translates to: EWTGARSQRGSSRPG*QPRSCLNTWGGLWT Trigger: AGTCCACAGACCACCCCAAGTATTCAGACATGATCGTGGCTGCCATCCAGGCCGAGAAGAACCGCGCTGGCTCCTCGCGCCAGTCCATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 90 bp | GGTTCTTCTCGGCCTGGATGGCAGCCACGATCATGTCTGAATACTTaGGGTGGTCTGTGGACTTCTTGGAGGCCTTGGCCCGCTTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GSSRPGWQPRSCLNT*GGLWTSWRPWPAWA Trigger: AGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGATCGTGGCTGCCATCCAGGCCGAGAAGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS GCA 90 bp | GGGTTTCTTGGTTGGGGCTTTGGAGGCAGCCTTCTTGGGCTTGGATaGCTTCTTTGGCGTGGCTACCTTCTTGATTTCCTTCTTGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: GFLGWGFGGSLLGLG*LLWRGYLLDFLLGL Trigger: AAGACCAAGAAGGAAATCAAGAAGGTAGCCACGCCAAAGAAGGCATCCAAGCCCAAGAAGGCTGCCTCCAAAGCCCCAACCAAGAAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS GCA 90 bp | ACTTCATTGTCACTTCTTCTTGCCGGCCCTCTTGGCACTGGACTTTaGTTTGGGTTTCACTGGTTTGGCCTTTTTGGGCTTGGATGCCTT | + |
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Preference number: 5 (lower is better) Translates to: TSLSLLLAGPLGTGL*FGFHWFGLFGLGCL Trigger: AAGGCATCCAAGCCCAAAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 90 bp | AGAAAAGACTTCATTGTCACTTCTTCTTGCCGGCCCTCTTGGCACTaGACTTTGCTTTGGGTTTCACTGGTTTGGCCTTTTTGGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: RKDFIVTSSCRPSWH*TLLWVSLVWPFWAW Trigger: CCAAGCCCAAAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATGAAGTCTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 90 bp | TCCGCAAGAAAAGACTTCATTGTCACTTCTTCTTGCCGGCCCTCTTaGCACTGGACTTTGCTTTGGGTTTCACTGGTTTGGCCTTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: SARKDFIVTSSCRPS*HWTLLWVSLVWPFW Trigger: CCAAAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATGAAGTCTTTTCTTGCGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | CCGGCTTTGCGAGGCCCAGCCCCGCCGGTCTGTCGCTaGGTCTCGGCACCGGGCTCGGGCTCTGCCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PALRGPAPPVCR*VSAPGSGSASA Trigger: GGCAGAGGCAGAGCCCGAGCCCGGTGCCGAGACCAAGCGACAGACCGGCGGGGCTGGGCCTCGCAAAGCCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | CGGCTTTGCGAGGCCCAGCCCCGCCGGTCTGTCGCTTaGTCTCGGCACCGGGCTCGGGCTCTGCCTCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: RLCEAQPRRSVA*SRHRARALPLP Trigger: AGGCAGAGGCAGAGCCCGAGCCCGGTGCCGAGACCAAGCGACAGACCGGCGGGGCTGGGCCTCGCAAAGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | GGATCTGCTCCTGAGCCCCTGACTACCGGGCCAGTCTaGAGTGCGGCTCCCGGGGATGCGAGCGAGGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: GSAPEPLTTGPV*SAAPGDASEES Trigger: CGACTCCTCGCTCGCATCCCCGGGAGCCGCACTCCAGACTGGCCCGGTAGTCAGGGGCTCAGGAGCAGATCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | CCTTGGCCCGCTTGGGCTTGGCCGCAGGGGCGGACGTaGAATTCTCGGTCATGGTGGCCTGTCTGGTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: PWPAWAWPQGRT*NSRSWWPVWSG Trigger: GCCGGACCAGACAGGCCACCATGACCGAGAATTCCACGTCCGCCCCTGCGGCCAAGCCCAAGCGGGCCAAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS TCA 72 bp | AAGGCGCCTTCCAAAGGGCCAGCCCTCGTCGGAGGCTaGGCAAAGCCTGCCTCGGGATCTGCTCCTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: KAPSKGPALVGG*AKPASGSAPEP Trigger: GGGCTCAGGAGCAGATCCCGAGGCAGGCTTTGCTCAGCCTCCGACGAGGGCTGGCCCTTTGGAAGGCGCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | GGTGGTCTGTGGACTTCTTGGAGGCCTTGGCCCGCTTaGGCTTGGCCGCAGGGGCGGACGTGGAATTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: GGLWTSWRPWPA*AWPQGRTWNSR Trigger: CCGAGAATTCCACGTCCGCCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | GGGTGGTCTGTGGACTTCTTGGAGGCCTTGGCCCGCTaGGGCTTGGCCGCAGGGGCGGACGTGGAATTCTCG | + |
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Preference number: 6 (lower is better) Translates to: GWSVDFLEALAR*GLAAGADVEFS Trigger: CGAGAATTCCACGTCCGCCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | AATACTTGGGGTGGTCTGTGGACTTCTTGGAGGCCTTaGCCCGCTTGGGCTTGGCCGCAGGGGCGGACGTGG | + |
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Preference number: 6 (lower is better) Translates to: NTWGGLWTSWRP*PAWAWPQGRTW Trigger: CCACGTCCGCCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | TTGGGGTGGTCTGTGGACTTCTTGGAGGCCTTGGCCCGCTTGGGCTaGGCCGCAGGGGCGGACGTGGAATTCTCGGTCATGGTGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: LGWSVDFLEALARLG*AAGADVEFSVMVAC Trigger: ACAGGCCACCATGACCGAGAATTCCACGTCCGCCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | TCTGTGGACTTCTTGGAGGCCTTGGCCCGCTTGGGCTaGGCCGCAGGGGCGGACGTGGAATTCTCGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SVDFLEALARLG*AAGADVEFSVM Trigger: CATGACCGAGAATTCCACGTCCGCCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | GCAGCCACGATCATGTCTGAATACTTGGGGTGGTCTGTGGACTTCTaGGAGGCCTTGGCCCGCTTGGGCTTGGCCGCAGGGGCGGACGTG | + |
|
Preference number: 6 (lower is better) Translates to: AATIMSEYLGWSVDF*EALARLGLAAGADV Trigger: CACGTCCGCCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGATCGTGGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | GAATACTTGGGGTGGTCTGTGGACTTCTTGGAGGCCTTGGCCCGCTaGGGCTTGGCCGCAGGGGCGGACGTGGAATTCTCGGTCATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EYLGWSVDFLEALAR*GLAAGADVEFSVMV Trigger: CACCATGACCGAGAATTCCACGTCCGCCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS TCA 72 bp | AATTCTCGGTCATGGTGGCCTGTCTGGTCCGGCTGTTaGAGGCGCCTTCCAAAGGGCCAGCCCTCGTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: NSRSWWPVWSGC*RRLPKGQPSSE Trigger: CTCCGACGAGGGCTGGCCCTTTGGAAGGCGCCTTCAACAGCCGGACCAGACAGGCCACCATGACCGAGAATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | GGCGCGAGGAGCCAGCGCGGTTCTTCTCGGCCTGGATaGCAGCCACGATCATGTCTGAATACTTGGGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GARSQRGSSRPG*QPRSCLNTWGG Trigger: ACCACCCCAAGTATTCAGACATGATCGTGGCTGCCATCCAGGCCGAGAAGAACCGCGCTGGCTCCTCGCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | GACTGGCGCGAGGAGCCAGCGCGGTTCTTCTCGGCCTaGATGGCAGCCACGATCATGTCTGAATACTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: DWREEPARFFSA*MAATIMSEYLG Trigger: CCCCAAGTATTCAGACATGATCGTGGCTGCCATCCAGGCCGAGAAGAACCGCGCTGGCTCCTCGCGCCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | GAATTCTCGGTCATGGTGGCCTGTCTGGTCCGGCTGTaGAAGGCGCCTTCCAAAGGGCCAGCCCTCGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: EFSVMVACLVRL*KAPSKGPALVG Trigger: TCCGACGAGGGCTGGCCCTTTGGAAGGCGCCTTCAACAGCCGGACCAGACAGGCCACCATGACCGAGAATTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | TCATGTCTGAATACTTGGGGTGGTCTGTGGACTTCTTaGAGGCCTTGGCCCGCTTGGGCTTGGCCGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SCLNTWGGLWTS*RPWPAWAWPQG Trigger: CCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | ATCATGTCTGAATACTTGGGGTGGTCTGTGGACTTCTTGGAGGCCTaGGCCCGCTTGGGCTTGGCCGCAGGGGCGGACGTGGAATTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: IMSEYLGWSVDFLEA*ARLGLAAGADVEFS Trigger: CGAGAATTCCACGTCCGCCCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | CGGTTCTTCTCGGCCTGGATGGCAGCCACGATCATGTCTGAATACTaGGGGTGGTCTGTGGACTTCTTGGAGGCCTTGGCCCGCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RFFSAWMAATIMSEY*GWSVDFLEALARLG Trigger: GCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGATCGTGGCTGCCATCCAGGCCGAGAAGAACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | GGCGTGGCAGCCAGCTTCTTCTTGGCCTTCTTGACCGGGGTGGCTTaGGGTTTCTTGGTTGGGGCTTTGGAGGCAGCCTTCTTGGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GVAASFFLAFLTGVA*GFLVGALEAAFLGL Trigger: CAAGCCCAAGAAGGCTGCCTCCAAAGCCCCAACCAAGAAACCCAAAGCCACCCCGGTCAAGAAGGCCAAGAAGAAGCTGGCTGCCACGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | CGGCCTGGATGGCAGCCACGATCATGTCTGAATACTTaGGGTGGTCTGTGGACTTCTTGGAGGCCTTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPGWQPRSCLNT*GGLWTSWRPWP Trigger: GGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGATCGTGGCTGCCATCCAGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | ATCATGTCTGAATACTTGGGGTGGTCTGTGGACTTCTaGGAGGCCTTGGCCCGCTTGGGCTTGGCCGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: IMSEYLGWSVDF*EALARLGLAAG Trigger: CCCTGCGGCCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | CCCACCCCTTTGGTCTGCTTGAGGACACCGGTGGTGACCAGGCGCTaGATGGACAACTTGATCTGCGAGTCAGCGTTCTCACCCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PTPLVCLRTPVVTRR*MDNLICESAFSPTL Trigger: CAAGGTGGGTGAGAACGCTGACTCGCAGATCAAGTTGTCCATCAAGCGCCTGGTCACCACCGGTGTCCTCAAGCAGACCAAAGGGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | CAGCCACGATCATGTCTGAATACTTGGGGTGGTCTGTaGACTTCTTGGAGGCCTTGGCCCGCTTGGGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QPRSCLNTWGGL*TSWRPWPAWAW Trigger: CCAAGCCCAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGATCGTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | GCCAGCTTCTTCTTGGCCTTCTTGACCGGGGTGGCTTaGGGTTTCTTGGTTGGGGCTTTGGAGGCAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASFFLAFLTGVA*GFLVGALEAAF Trigger: GAAGGCTGCCTCCAAAGCCCCAACCAAGAAACCCAAAGCCACCCCGGTCAAGAAGGCCAAGAAGAAGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | TTCTTGGGCGTGGCAGCCAGCTTCTTCTTGGCCTTCTaGACCGGGGTGGCTTTGGGTTTCTTGGTTGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FLGVAASFFLAF*TGVALGFLVGA Trigger: AGCCCCAACCAAGAAACCCAAAGCCACCCCGGTCAAGAAGGCCAAGAAGAAGCTGGCTGCCACGCCCAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | ACCTTCTTGATTTCCTTCTTGGTCTTCTTGAAGGCCACTGACTTCTaGGGTTCGTCGCTCTTGGCTAGCCGGAAGGACCCCGAGGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TFLISFLVFLKATDF*GSSLLASRKDPEAP Trigger: GGGGGCCTCGGGGTCCTTCCGGCTAGCCAAGAGCGACGAACCCAAGAAGTCAGTGGCCTTCAAGAAGACCAAGAAGGAAATCAAGAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | TGGATGGCAGCCACGATCATGTCTGAATACTTGGGGTaGTCTGTGGACTTCTTGGAGGCCTTGGCCCGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WMAATIMSEYLG*SVDFLEALARL Trigger: CAAGCGGGCCAAGGCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGATCGTGGCTGCCATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS TCA 72 bp | GTTCTTCTCGGCCTGGATGGCAGCCACGATCATGTCTaGATACTTGGGGTGGTCTGTGGACTTCTTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLLGLDGSHDHV*ILGVVCGLLGG Trigger: GCCTCCAAGAAGTCCACAGACCACCCCAAGTATTCAGACATGATCGTGGCTGCCATCCAGGCCGAGAAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS TCA 72 bp | GCGAGTCAGCGTTCTCACCCACCTTGTAGTGGCTCTTaGTATACTTCTGAATGGACTGGCGCGAGGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASQRSHPPCSGS*YTSEWTGARSQ Trigger: CTGGCTCCTCGCGCCAGTCCATTCAGAAGTATATCAAGAGCCACTACAAGGTGGGTGAGAACGCTGACTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | GGCCCTCTTGGCACTGGACTTTGCTTTGGGTTTCACTaGTTTGGCCTTTTTGGGCTTGGATGCCTTGACCGG | + |
|
Preference number: 6 (lower is better) Translates to: GPLGTGLCFGFH*FGLFGLGCLDR Trigger: CCGGTCAAGGCATCCAAGCCCAAAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | TTGGTCTGCTTGAGGACACCGGTGGTGACCAGGCGCTaGATGGACAACTTGATCTGCGAGTCAGCGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LVCLRTPVVTRR*MDNLICESAFS Trigger: TGAGAACGCTGACTCGCAGATCAAGTTGTCCATCAAGCGCCTGGTCACCACCGGTGTCCTCAAGCAGACCAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | GGCTTGGATGCCTTGACCGGCTTGGCTTTGACAGTCTTGGGTTTTTaGGCTTTCTTGGGCGTGGCAGCCAGCTTCTTCTTGGCCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GLDALTGLALTVLGF*AFLGVAASFFLAFL Trigger: CAAGAAGGCCAAGAAGAAGCTGGCTGCCACGCCCAAGAAAGCCAAAAAACCCAAGACTGTCAAAGCCAAGCCGGTCAAGGCATCCAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS GCA 72 bp | GGTTGGGGCTTTGGAGGCAGCCTTCTTGGGCTTGGATaGCTTCTTTGGCGTGGCTACCTTCTTGATTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GWGFGGSLLGLG*LLWRGYLLDFL Trigger: AAGGAAATCAAGAAGGTAGCCACGCCAAAGAAGGCATCCAAGCCCAAGAAGGCTGCCTCCAAAGCCCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | TTTTTGGCTTTCTTGGGCGTGGCAGCCAGCTTCTTCTaGGCCTTCTTGACCGGGGTGGCTTTGGGTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FLAFLGVAASFF*AFLTGVALGFL Trigger: CAAGAAACCCAAAGCCACCCCGGTCAAGAAGGCCAAGAAGAAGCTGGCTGCCACGCCCAAGAAAGCCAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | GCCTTGACCGGCTTGGCTTTGACAGTCTTGGGTTTTTaGGCTTTCTTGGGCGTGGCAGCCAGCTTCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALTGLALTVLGF*AFLGVAASFFL Trigger: CAAGAAGAAGCTGGCTGCCACGCCCAAGAAAGCCAAAAAACCCAAGACTGTCAAAGCCAAGCCGGTCAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | GGAGACAGGAGGGAGTGTCCGCAAGAAAAGACTTCATaGTCACTTCTTCTTGCCGGCCCTCTTGGCACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GDRRECPQEKTS*SLLLAGPLGTG Trigger: TCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATGAAGTCTTTTCTTGCGGACACTCCCTCCTGTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | CTCTTGGCACTGGACTTTGCTTTGGGTTTCACTGGTTaGGCCTTTTTGGGCTTGGATGCCTTGACCGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLALDFALGFTG*AFLGLDALTGL Trigger: CAAGCCGGTCAAGGCATCCAAGCCCAAAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | CTCTTGGCACTGGACTTTGCTTTGGGTTTCACTGGTTTGGCCTTTTaGGGCTTGGATGCCTTGACCGGCTTGGCTTTGACAGTCTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLALDFALGFTGLAF*GLDALTGLALTVLG Trigger: ACCCAAGACTGTCAAAGCCAAGCCGGTCAAGGCATCCAAGCCCAAAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | CATTGTCACTTCTTCTTGCCGGCCCTCTTGGCACTGGACTTTGCTTaGGGTTTCACTGGTTTGGCCTTTTTGGGCTTGGATGCCTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: HCHFFLPALLALDFA*GFTGLAFLGLDALT Trigger: GGTCAAGGCATCCAAGCCCAAAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | GGCTTGGATGCCTTCTTTGGCGTGGCTACCTTCTTGATTTCCTTCTaGGTCTTCTTGAAGGCCACTGACTTCTTGGGTTCGTCGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GLDAFFGVATFLISF*VFLKATDFLGSSLL Trigger: CAAGAGCGACGAACCCAAGAAGTCAGTGGCCTTCAAGAAGACCAAGAAGGAAATCAAGAAGGTAGCCACGCCAAAGAAGGCATCCAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | GACTTCATTGTCACTTCTTCTTGCCGGCCCTCTTGGCACTGGACTTaGCTTTGGGTTTCACTGGTTTGGCCTTTTTGGGCTTGGATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DFIVTSSCRPSWHWT*LWVSLVWPFWAWMP Trigger: AGGCATCCAAGCCCAAAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATGAAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | ACAGGAGGGAGTGTCCGCAAGAAAAGACTTCATTGTCACTTCTTCTaGCCGGCCCTCTTGGCACTGGACTTTGCTTTGGGTTTCACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGGSVRKKRLHCHFF*PALLALDFALGFTG Trigger: ACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATGAAGTCTTTTCTTGCGGACACTCCCTCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | CTGGACTTTGCTTTGGGTTTCACTGGTTTGGCCTTTTaGGGCTTGGATGCCTTGACCGGCTTGGCTTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LDFALGFTGLAF*GLDALTGLALT Trigger: TGTCAAAGCCAAGCCGGTCAAGGCATCCAAGCCCAAAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | TTCTTCTTGCCGGCCCTCTTGGCACTGGACTTTGCTTaGGGTTTCACTGGTTTGGCCTTTTTGGGCTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FFLPALLALDFA*GFTGLAFLGLD Trigger: ATCCAAGCCCAAAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS GCA 72 bp | TTTGGGTTTCACTGGTTTGGCCTTTTTGGGCTTGGATaGCTTGACCGGCTTGGCTTTGACAGTCTTGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: FGFHWFGLFGLG*LDRLGFDSLGF Trigger: AAACCCAAGACTGTCAAAGCCAAGCCGGTCAAGGCATCCAAGCCCAAAAAGGCCAAACCAGTGAAACCCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | TTGGGCTTGGATGCCTTCTTTGGCGTGGCTACCTTCTaGATTTCCTTCTTGGTCTTCTTGAAGGCCACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LGLDAFFGVATF*ISFLVFLKATD Trigger: GTCAGTGGCCTTCAAGAAGACCAAGAAGGAAATCAAGAAGGTAGCCACGCCAAAGAAGGCATCCAAGCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | TTTGCTTTGGGTTTCACTGGTTTGGCCTTTTTGGGCTaGGATGCCTTGACCGGCTTGGCTTTGACAGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FALGFTGLAFLG*DALTGLALTVL Trigger: CAAGACTGTCAAAGCCAAGCCGGTCAAGGCATCCAAGCCCAAAAAGGCCAAACCAGTGAAACCCAAAGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | AGTGTCCGCAAGAAAAGACTTCATTGTCACTTCTTCTaGCCGGCCCTCTTGGCACTGGACTTTGCTTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SVRKKRLHCHFF*PALLALDFALG Trigger: ACCCAAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATGAAGTCTTTTCTTGCGGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | GTCCGCAAGAAAAGACTTCATTGTCACTTCTTCTTGCCGGCCCTCTaGGCACTGGACTTTGCTTTGGGTTTCACTGGTTTGGCCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VRKKRLHCHFFLPAL*ALDFALGFTGLAFL Trigger: CAAAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATGAAGTCTTTTCTTGCGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 90 bp | CAGAAAATAGGAGACAGGAGGGAGTGTCCGCAAGAAAAGACTTCATaGTCACTTCTTCTTGCCGGCCCTCTTGGCACTGGACTTTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QKIGDRRECPQEKTS*SLLLAGPLGTGLCF Trigger: AAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATGAAGTCTTTTCTTGCGGACACTCCCTCCTGTCTCCTATTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | TTCATTGTCACTTCTTCTTGCCGGCCCTCTTGGCACTaGACTTTGCTTTGGGTTTCACTGGTTTGGCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: FIVTSSCRPSWH*TLLWVSLVWPF Trigger: AAAAGGCCAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CCA 72 bp | AAAGACTTCATTGTCACTTCTTCTTGCCGGCCCTCTTaGCACTGGACTTTGCTTTGGGTTTCACTGGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: KDFIVTSSCRPS*HWTLLWVSLVW Trigger: CCAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATGAAGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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| CDS CAA 72 bp | AAAAGACTTCATTGTCACTTCTTCTTGCCGGCCCTCTaGGCACTGGACTTTGCTTTGGGTTTCACTGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: KRLHCHFFLPAL*ALDFALGFTGL Trigger: CAAACCAGTGAAACCCAAAGCAAAGTCCAGTGCCAAGAGGGCCGGCAAGAAGAAGTGACAATGAAGTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340857.4 |
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