RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GUCD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000138867

Ensembl transcript IDs: ENST00000398245.8, ENST00000402766.5, ENST00000404664.7, ENST00000407471.7, ENST00000407973.2, ENST00000435822.6, ENST00000447813.6, ENST00000468170.1, ENST00000480272.1, ENST00000490810.1, ENST00000493099.1, ENST00000621833.4

Found 785 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGCTGTGGGGGCTTTAAGAGTCTCCAGCGGCCAGGGCTCTGCATaGCAGGGCAGCTGTGAGGTGTGTCTATGCTGGGTGGCAGGGGTC +
Preference number: 1 (lower is better)
Translates to: RAVGALRVSSGQGSA*QGSCEVCLCWVAGV
Trigger: GACCCCTGCCACCCAGCATAGACACACCTCACAGCTGCCCTGCCATGCAGAGCCCTGGCCGCTGGAGACTCTTAAAGCCCCCACAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR GCA 90 bp AGCGGCCAGGGCTCTGCATGGCAGGGCAGCTGTGAGGTGTGTCTATaGTGGGTGGCAGGGGTCAGATGCCCTGTAATGAGCCACAGAAAC +
Preference number: 1 (lower is better)
Translates to: SGQGSAWQGSCEVCL*WVAGVRCPVMSHRN
Trigger: GTTTCTGTGGCTCATTACAGGGCATCTGACCCCTGCCACCCAGCATAGACACACCTCACAGCTGCCCTGCCATGCAGAGCCCTGGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 90 bp GCTGTTTATTCCCAGAGCACTGCTGCCAGCCACGAGGCCTACCAGTaGGATCTAGGCCCGAGAGCCCTCCATCTGACAGAGCTGGAGGAC +
Preference number: 1 (lower is better)
Translates to: AVYSQSTAASHEAYQ*DLGPRALHLTELED
Trigger: GTCCTCCAGCTCTGTCAGATGGAGGGCTCTCGGGCCTAGATCCCACTGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAATAAACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 90 bp CTCCAAAGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTaGGCATTGGAAGAGCAGGACCCAGGAGTGCAGGGATGGTATCAC +
Preference number: 1 (lower is better)
Translates to: LQSNGRGHSCHHAMP*ALEEQDPGVQGWYH
Trigger: GTGATACCATCCCTGCACTCCTGGGTCCTGCTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCTTTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 90 bp GGCCAGGGCTCTGCATGGCAGGGCAGCTGTGAGGTGTGTCTATGCTaGGTGGCAGGGGTCAGATGCCCTGTAATGAGCCACAGAAACTTG +
Preference number: 1 (lower is better)
Translates to: GQGSAWQGSCEVCLC*VAGVRCPVMSHRNL
Trigger: CAAGTTTCTGTGGCTCATTACAGGGCATCTGACCCCTGCCACCCAGCATAGACACACCTCACAGCTGCCCTGCCATGCAGAGCCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR TCA 90 bp CAACTGTCCCACATGGCTTCAGGTGCTGTGCTGGTCCCCAGCATGTaGACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAG +
Preference number: 1 (lower is better)
Translates to: QLSHMASGAVLVPSM*TGWAAVGVMCCGQK
Trigger: CTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACCAGCACAGCACCTGAAGCCATGTGGGACAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 90 bp ATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTaGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGG +
Preference number: 1 (lower is better)
Translates to: IAMDLAQRQQGHCRD*TSCGRSWSQGLGSW
Trigger: CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 90 bp CTCTCTCCAGGCTCAGTCCTGCGGTCTGTGGGGAGACCATTGCCATaGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACTT +
Preference number: 1 (lower is better)
Translates to: LSPGSVLRSVGRPLP*IWLKGNKGTVGTGL
Trigger: AAGTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGACTGAGCCTGGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 90 bp CCTCTTCTCCATCAAGATAGACAAGACCCAGTATCCTGTGCAATCTaGTGTGAAGACCAGGTTGGGTGGGCAGCTGCAGGCTGCCCCAGC +
Preference number: 1 (lower is better)
Translates to: PLLHQDRQDPVSCAI*CEDQVGWAAAGCPS
Trigger: GCTGGGGCAGCCTGCAGCTGCCCACCCAACCTGGTCTTCACACCAGATTGCACAGGATACTGGGTCTTGTCTATCTTGATGGAGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR GCA 90 bp GCATTGGAAGAGCAGGACCCAGGAGTGCAGGGATGGTATCACTGTTaGCCCTTTGAAAATGACCCATTTCCCACTTTGGGAGGCCGAGGC +
Preference number: 1 (lower is better)
Translates to: ALEEQDPGVQGWYHC*PFENDPFPTLGGRG
Trigger: GCCTCGGCCTCCCAAAGTGGGAAATGGGTCATTTTCAAAGGGGCAACAGTGATACCATCCCTGCACTCCTGGGTCCTGCTCTTCCAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR GCA 90 bp AGGCTTTGTCTAGGGTTGAGAAGCAATTTGGCTGGGTGGTCTCACTaGCCTCCTAAACAGAGCCCACCTCTGCCCCCAGAGTCATCTGTG +
Preference number: 1 (lower is better)
Translates to: RLCLGLRSNLAGWSH*PPKQSPPLPPESSV
Trigger: CACAGATGACTCTGGGGGCAGAGGTGGGCTCTGTTTAGGAGGGCAGTGAGACCACCCAGCCAAATTGCTTCTCAACCCTAGACAAAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR GCA 90 bp TTTACCAGAACACCACCTGAAGATGCCCACACCCCACAGCTGCTGTaGATGGGTACTCCTGGGCCACCTGGCATTAAGGCAATGGAGATG +
Preference number: 1 (lower is better)
Translates to: FTRTPPEDAHTPQLL*MGTPGPPGIKAMEM
Trigger: CATCTCCATTGCCTTAATGCCAGGTGGCCCAGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGGCATCTTCAGGTGGTGTTCTGGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 90 bp GTAATGAGCCACAGAAACTTGGGCCCATGGGTAGGCAGGTGGTGGTaGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCA +
Preference number: 1 (lower is better)
Translates to: VMSHRNLGPWVGRWW*YHQPLGTGAYAALP
Trigger: TGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTTTCTGTGGCTCATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 90 bp GGTCAGCTATGCTGTCTCCAGACACTCACATACTGTCCTGACAAGTaGCATCCGTCAAGCAACTTCTCTCTCCAGGCTCAGTCCTGCGGT +
Preference number: 1 (lower is better)
Translates to: GQLCCLQTLTYCPDK*HPSSNFSLQAQSCG
Trigger: ACCGCAGGACTGAGCCTGGAGAGAGAAGTTGCTTGACGGATGCCACTTGTCAGGACAGTATGTGAGTGTCTGGAGACAGCATAGCTGACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR TCA 90 bp GGATTGGGGTCAGCTATGCTGTCTCCAGACACTCACATACTGTCCTaGCAAGTGGCATCCGTCAAGCAACTTCTCTCTCCAGGCTCAGTC +
Preference number: 1 (lower is better)
Translates to: GLGSAMLSPDTHILS*QVASVKQLLSPGSV
Trigger: GACTGAGCCTGGAGAGAGAAGTTGCTTGACGGATGCCACTTGTCAGGACAGTATGTGAGTGTCTGGAGACAGCATAGCTGACCCCAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 90 bp GCCATGCCTTGGGCATTGGAAGAGCAGGACCCAGGAGTGCAGGGATaGTATCACTGTTGCCCCTTTGAAAATGACCCATTTCCCACTTTG +
Preference number: 1 (lower is better)
Translates to: AMPWALEEQDPGVQG*YHCCPFENDPFPTL
Trigger: CAAAGTGGGAAATGGGTCATTTTCAAAGGGGCAACAGTGATACCATCCCTGCACTCCTGGGTCCTGCTCTTCCAATGCCCAAGGCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR TCA 90 bp TTTCTAAACATTTTGGCTGGACTGAGGTGCTGTTACCACCCTCCATaGAGGCCACTCCCTAGTGACAGCCCTAACAGCATGTGCACTGTC +
Preference number: 1 (lower is better)
Translates to: FLNILAGLRCCYHPP*RPLPSDSPNSMCTV
Trigger: GACAGTGCACATGCTGTTAGGGCTGTCACTAGGGAGTGGCCTTCATGGAGGGTGGTAACAGCACCTCAGTCCAGCCAAAATGTTTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 90 bp CGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCTaGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTC +
Preference number: 1 (lower is better)
Translates to: RCHVLWAKVPDVQAL*LHFHDLCKNATQCV
Trigger: GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR TCA 90 bp AAATCTCTGCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATaGACAAAGCCCAACTGTCCCACATGGCTTCAGGTGCTGTGCTGG +
Preference number: 1 (lower is better)
Translates to: KSLQCKRSLSSPWLE*TKPNCPTWLQVLCW
Trigger: CCAGCACAGCACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGCAGAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR GCA 90 bp AAAGTCCCTGATGTCCAGGCTCTCTGGCTCCATTTTCATGACTTGTaGAAGAATGCAACACAGTGTGTCTTACATCCTGCCTCTGTGACC +
Preference number: 1 (lower is better)
Translates to: KVPDVQALWLHFHDL*KNATQCVLHPASVT
Trigger: GGTCACAGAGGCAGGATGTAAGACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTGGACATCAGGGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 90 bp AGAGGAAGGAAAGAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTaGGCAGGAACCCCTCTTCTCCATCAAGATAGACAAGACCCAGTA +
Preference number: 1 (lower is better)
Translates to: RGRKELYATCCVVRS*AGTPLLHQDRQDPV
Trigger: TACTGGGTCTTGTCTATCTTGATGGAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTCTTTCCTTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 90 bp CTTAAACCACTGGCCAAGTCCCTTTCTCTGAAAAAGAACTTGAGCTaGCTAACTGCCCTGTGCAGAGGTGTTAGTGGTTCCAAAGTACCT +
Preference number: 1 (lower is better)
Translates to: LKPLAKSLSLKKNLS*LTALCRGVSGSKVP
Trigger: AGGTACTTTGGAACCACTAACACCTCTGCACAGGGCAGTTAGCCAGCTCAAGTTCTTTTTCAGAGAAAGGGACTTGGCCAGTGGTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCCAGGAGAGAGGGGCCTaGAGGGGTCCTCAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: GRQVVVVSSTTGHRGICSQERGA*RGPQPW
Trigger: CCAGGGCTGAGGACCCCTCCAGGCCCCTCTCTCCTG...GCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp CAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGACTGGACTTCCTGTaGGCGCAGCTGGAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: QGHCRDWTSCGRSWSQGLGLDFL*AQLESR
Trigger: CCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCC...CAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACAGGAGAGAGGGGCCTaGAGGGGTCCTCAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAQERGA*RGPQPW
Trigger: CCAGGGCTGAGGACCCCTCCAGGCCCCTCTCTCCTG...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CAA 90 bp GCTCCAAAGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTaGGGCATTGGAAGAGCAGGACCCAGGAGTGCAGGGATGGTATCA +
Preference number: 2 (lower is better)
Translates to: APKQWAGAQLPPCHA*GIGRAGPRSAGMVS
Trigger: TGATACCATCCCTGCACTCCTGGGTCCTGCTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCTTTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAACTTGTGGCATGCCCTaGGAAGCCATCCTCTGGGAC +
Preference number: 2 (lower is better)
Translates to: GPQHVNRLGSCRCHVLWATCGMP*EAILWD
Trigger: GTCCCAGAGGATGGCTTCTCAGGGCATGCCACAAGT...TGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGGGTGCTTGGGGTGAGTaGCATGACAACACACGGCAC +
Preference number: 2 (lower is better)
Translates to: SNGRGHSCHHAMPWALEEGAWGE*HDNTRH
Trigger: GTGCCGTGTGTTGTCATGTCACTCACCCCAAGCACC...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAGGTGCTTGGGGTGAGTaGCATGACAACACACGGCAC +
Preference number: 2 (lower is better)
Translates to: GPQHVNRLGSCRCHVLWAGAWGE*HDNTRH
Trigger: GTGCCGTGTGTTGTCATGTCACTCACCCCAAGCACC...TGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGCAAGGCTTGGGGTCTTaGGGTATGCTTCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWQGLGS*GMLPAA
Trigger: GGCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTG...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCGGGCACTGTCGGGACTaGACTTCCTGTGGGCGCAGC +
Preference number: 2 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVGHCRD*TSCGRS
Trigger: GCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GGGCAGCTGTTTATTCCCAGAGCACTGCTGCCAGCCACGAGGCCTACCAGTGGGAGAAACTTGGGCCCATaGGTAGGCAGGTGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: GQLFIPRALLPATRPTSGRNLGP*VGRWWW
Trigger: CCACCACCACCTGCCTACCCATGGGCCCAAGTTTCT...CCCACTGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAATAAACAGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTGCTGGAGTCAAGGCTTaGGGTCTTGGGGTATGCTTC +
Preference number: 2 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSAGVKA*GLGVCF
Trigger: GAAGCATACCCCAAGACCCCAAGCCTTGACTCCAGC...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCGGGAGACCATTGCCATaGATCTGGCTCAAAGGCAAC +
Preference number: 2 (lower is better)
Translates to: GPMGRQVVVVSSTTGHRGGRPLP*IWLKGN
Trigger: GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCC...GCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCCCCTCCCTAGGCAGATaGGTCTTGAGAATGGGCAGC +
Preference number: 2 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALPSLGR*VLRMGS
Trigger: GCTGCCCATTCTCAAGACTCATCTGCCTAGGGAGGG...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp GGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGCTCCAGGCTCAGTCCTaGGGTCTGTGGGGAGACCAT +
Preference number: 2 (lower is better)
Translates to: GIINHWAQGHMQHFQERGLQAQS*GLWGDH
Trigger: ATGGTCTCCCCACAGACCGCAGGACTGAGCCTGGAG...CCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCTCCAGGCTCAGTCCTaGGGTCTGTGGGGAGACCAT +
Preference number: 2 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVLQAQS*GLWGDH
Trigger: ATGGTCTCCCCACAGACCGCAGGACTGAGCCTGGAG...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGGGACTCTGCCAGATaGGCTGAGGCTGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARWDSAR*AEAAVP
Trigger: TGGAACTGCAGCCTCAGCCCATCTGGCAGAGTCCCA...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCCAAGGCTTGGGGTCTTaGGGTATGCTTCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: IINHWAQGHMQHFQERGAQGLGS*GMLPAA
Trigger: GGCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTG...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GCAGCCAACCTTAAAGGACTAGGGGCTCCCCACACTCAAGAGGGCAGACCCTGCGCTGGAGTCAAGGCTTaGGGTCTTGGGGTATGCTTC +
Preference number: 2 (lower is better)
Translates to: AANLKGLGAPHTQEGRPCAGVKA*GLGVCF
Trigger: GAAGCATACCCCAAGACCCCAAGCCTTGACTCCAGC...GCAGGGTCTGCCCTCTTGAGTGTGGGGAGCCCCTAGTCCTTTAAGGTTGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACATCCTGTGGGCGCAGCTaGAGTCAAGGCTTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTSCGRS*SQGLGS
Trigger: AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGA...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGACTGGACTTCCTGTaGGCGCAGCTGGAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTGLDFL*AQLESR
Trigger: CCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCC...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGGGGAGACCATTGCCATaGATCTGGCTCAAAGGCAAC +
Preference number: 2 (lower is better)
Translates to: SNGRGHSCHHAMPWALEEGRPLP*IWLKGN
Trigger: GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCC...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GGGCAGCTGTTTATTCCCAGAGCACTGCTGCCAGCCACGAGGCCTACCAGTGGGGGGAGACCATTGCCATaGATCTGGCTCAAAGGCAAC +
Preference number: 2 (lower is better)
Translates to: GQLFIPRALLPATRPTSGGRPLP*IWLKGN
Trigger: GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCC...CCCACTGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAATAAACAGCTGCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CAA 90 bp TGCTGGGTGGCAGGGGTCAGATGCCCTGTAATGAGCCACAGAAACTaGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTG +
Preference number: 2 (lower is better)
Translates to: CWVAGVRCPVMSHRN*GPWVGRWWWYHQPL
Trigger: CAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTTTCTGTGGCTCATTACAGGGCATCTGACCCCTGCCACCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTACCAGAACACCACCTaGAGATGCCCACACCCCACA +
Preference number: 2 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDYQNTT*RCPHPT
Trigger: TGTGGGGTGTGGGCATCTTCAGGTGGTGTTCTGGTA...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAACTTGTGGCATGCCCTaGGAAGCCATCCTCTGGGAC +
Preference number: 2 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTTCGMP*EAILWD
Trigger: GTCCCAGAGGATGGCTTCTCAGGGCATGCCACAAGT...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGCCCTCCCTAGGCAGATaGGTCTTGAGAATGGGCAGC +
Preference number: 2 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRPSLGR*VLRMGS
Trigger: GCTGCCCATTCTCAAGACTCATCTGCCTAGGGAGGG...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp TCAGTCCTGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACGGTGCTTGGGGTGAGTaGCATGACAACACACGGCAC +
Preference number: 2 (lower is better)
Translates to: SVLRSVGRPLPWIWLKGNGAWGE*HDNTRH
Trigger: GTGCCGTGTGTTGTCATGTCACTCACCCCAAGCACC...GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGACTCACATACTGTCCTaGCAAGTGGCATCCGTCAAG +
Preference number: 2 (lower is better)
Translates to: SNGRGHSCHHAMPWALEETHILS*QVASVK
Trigger: CTTGACGGATGCCACTTGTCAGGACAGTATGTGAGT...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCACCCCACAGCTGCTGTaGATGGGTACTCCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVTPQLL*MGTPGH
Trigger: ATGCCCTGGAGTACCCATGCACAGCAGCTGTGGGGT...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398245.8
3UTR-3UTR GCA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGGATTGGGGTCAGCTATaGTGTCTCCAGACACTCACA +
Preference number: 2 (lower is better)
Translates to: SNGRGHSCHHAMPWALEEDWGQL*CLQTLT
Trigger: TGTGAGTGTCTGGAGACAGCATAGCTGACCCCAATC...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCGGATGTCCTCATCTGTaGCATAGCTGGTTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: TALADKAAVPVSEFLGLCGCPHL*HSWFWP
Trigger: AGGCCAGAACCAGCTATGGCACAGATGAGGACATCC...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402766.5
ENST00000447813.6
3UTR-3UTR CCA 90 bp ACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATTGGGACTCTGCCAGATaGGCTGAGGCTGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: TGRQSSCASLRVPGTLPDWDSAR*AEAAVP
Trigger: TGGAACTGCAGCCTCAGCCCATCTGGCAGAGTCCCA...ATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACATGGGACTCTGCCAGATaGGCTGAGGCTGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTWDSAR*AEAAVP
Trigger: TGGAACTGCAGCCTCAGCCCATCTGGCAGAGTCCCA...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCGACAACACACGGCACTaGCAGACAAAGCAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: GRQVVVVSSTTGHRGICSDNTRH*QTKQLC
Trigger: GCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTC...GCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCAAGGCTTGGGGTCTTaGGGTATGCTTCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVQGLGS*GMLPAA
Trigger: GGCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTG...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCGCTGGAGTCAAGGCTTaGGGTCTTGGGGTATGCTTC +
Preference number: 2 (lower is better)
Translates to: IINHWAQGHMQHFQERGAAGVKA*GLGVCF
Trigger: GAAGCATACCCCAAGACCCCAAGCCTTGACTCCAGC...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGACTGGACTTCCTGTaGGCGCAGCTGGAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: GGIINHWAQGHMQHFQERGLDFL*AQLESR
Trigger: CCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCC...TCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTGGGCACTGTCGGGACTaGACTTCCTGTGGGCGCAGC +
Preference number: 2 (lower is better)
Translates to: IPFIPVARMNKAQLSHMAGHCRD*TSCGRS
Trigger: GCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCATACCAGAACACCACCTaGAGATGCCCACACCCCACA +
Preference number: 2 (lower is better)
Translates to: CGLWGDHCHGSGSKATRAYQNTT*RCPHPT
Trigger: TGTGGGGTGTGGGCATCTTCAGGTGGTGTTCTGGTA...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGTGTTACCACCCTCCATaGAGGCCACTCCCTAGTGAC +
Preference number: 2 (lower is better)
Translates to: GDHCHGSGSKATRALSGLCYHPP*RPLPSD
Trigger: GTCACTAGGGAGTGGCCTTCATGGAGGGTGGTAACA...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTCTGGTCCCCAGCATGTaGACAGGCTGGGCAGCTGTC +
Preference number: 2 (lower is better)
Translates to: IPFIPVARMNKAQLSHMALVPSM*TGWAAV
Trigger: GACAGCTGCCCAGCCTGTTCACATGCTGGGGACCAG...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp TCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCTCTGTGGGGAGACCATTaGCATGGATCTGGCTCAAAG +
Preference number: 2 (lower is better)
Translates to: SSTTGHRGICSTSRREGPLWGDH*HGSGSK
Trigger: CTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAG...AGGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACAACACACGGCACTaGCAGACAAAGCAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: GDHCHGSGSKATRALSGLDNTRH*QTKQLC
Trigger: GCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTC...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGGACAACACACGGCACTaGCAGACAAAGCAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRDNTRH*QTKQLC
Trigger: GCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTC...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCGACAACACACGGCACTaGCAGACAAAGCAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVDNTRH*QTKQLC
Trigger: GCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTC...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCGGGAGACCATTGCCATaGATCTGGCTCAAAGGCAAC +
Preference number: 2 (lower is better)
Translates to: IINHWAQGHMQHFQERGAGRPLP*IWLKGN
Trigger: GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCC...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGCAGGAGAGAGGGGCCTaGAGGGGTCCTCAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLQERGA*RGPQPW
Trigger: CCAGGGCTGAGGACCCCTCCAGGCCCCTCTCTCCTG...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CAA 90 bp CACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTaGGCTGGGTGGTCTCACTGCCCTCCTAAACAGAGCCCACCTCTG +
Preference number: 2 (lower is better)
Translates to: HLPLGQRLCLGLRSN*AGWSHCPPKQSPPL
Trigger: CAGAGGTGGGCTCTGTTTAGGAGGGCAGTGAGACCACCCAGCCAAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCTCTGGGACCAGAGACTaGGTGTTTCTAAACATTTTG +
Preference number: 2 (lower is better)
Translates to: GPMGRQVVVVSSTTGHRGSGTRD*VFLNIL
Trigger: CAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGA...GCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GGGCAGCTGTTTATTCCCAGAGCACTGCTGCCAGCCACGAGGCCTACCAGTGGGCTGGCTCCATTTTCATaGCTTGTGCAAGAATGCAAC +
Preference number: 2 (lower is better)
Translates to: GQLFIPRALLPATRPTSGLAPFS*LVQECN
Trigger: GTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAG...CCCACTGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAATAAACAGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTCACATACTGTCCTaGCAAGTGGCATCCGTCAAG +
Preference number: 2 (lower is better)
Translates to: GRQVVVVSSTTGHRGICSTHILS*QVASVK
Trigger: CTTGACGGATGCCACTTGTCAGGACAGTATGTGAGT...GCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCACTCACATACTGTCCTaGCAAGTGGCATCCGTCAAG +
Preference number: 2 (lower is better)
Translates to: IINHWAQGHMQHFQERGATHILS*QVASVK
Trigger: CTTGACGGATGCCACTTGTCAGGACAGTATGTGAGT...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCGATTGGGGTCAGCTATaGTGTCTCCAGACACTCACA +
Preference number: 2 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALDWGQL*CLQTLT
Trigger: TGTGAGTGTCTGGAGACAGCATAGCTGACCCCAATC...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGAGGAGGCCTCCTGGGTaGAGGGATCCCTCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLRRPPG*RDPSGA
Trigger: AGCCCCAGAGGGATCCCTGCACCCAGGAGGCCTCCT...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTGGATGTCCTCATCTGTaGCATAGCTGGTTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASGCPHL*HSWFWP
Trigger: AGGCCAGAACCAGCTATGGCACAGATGAGGACATCC...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402766.5
ENST00000447813.6
3UTR-3UTR CCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCGGACTGGACTTCCTGTaGGCGCAGCTGGAGTCAAGG +
Preference number: 2 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLGLDFL*AQLESR
Trigger: CCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCC...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACACCATTGCCATGGATCTaGCTCAAAGGCAACAAGGGC +
Preference number: 2 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTPLPWI*LKGNKG
Trigger: GCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGG...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGAAAAAGAACTTGAGCTaGCTAACTGCCCTGTGCAGA +
Preference number: 2 (lower is better)
Translates to: SNGRGHSCHHAMPWALEEKKNLS*LTALCR
Trigger: TCTGCACAGGGCAGTTAGCCAGCTCAAGTTCTTTTT...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCCACATCCCACCATCCTaGAAACTTCATTTCCTCCCA +
Preference number: 2 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALHIPPS*KLHFLP
Trigger: TGGGAGGAAATGAAGTTTTCAGGATGGTGGGATGTG...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTACTCACATACTGTCCTaGCAAGTGGCATCCGTCAAG +
Preference number: 2 (lower is better)
Translates to: GRWWWYHQPLGTGAYAALTHILS*QVASVK
Trigger: CTTGACGGATGCCACTTGTCAGGACAGTATGTGAGT...AAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGGCCAACACCGGTCTCTaGAACCCAGAAGGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLANTGL*NPEGLP
Trigger: GGGCAGCCCTTCTGGGTTTCAGAGACCGGTGTTGGC...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGGATTGGGGTCAGCTATaGTGTCTCCAGACACTCACA +
Preference number: 2 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRDWGQL*CLQTLT
Trigger: TGTGAGTGTCTGGAGACAGCATAGCTGACCCCAATC...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCTGTCAGGAGGCCTCCTaGGTGCAGGGATCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: QALWLHFHDLCKNATQCVCQEAS*VQGSLW
Trigger: CCAGAGGGATCCCTGCACCCAGGAGGCCTCCTGACA...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCACATCCCACCATCCTaGAAACTTCATTTCCTCCCA +
Preference number: 2 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASHIPPS*KLHFLP
Trigger: TGGGAGGAAATGAAGTTTTCAGGATGGTGGGATGTG...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp TGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCCTGGCTCCATTTTCATaGCTTGTGCAAGAATGCAAC +
Preference number: 2 (lower is better)
Translates to: WAAVGVMCCGQKSLMSRLLAPFS*LVQECN
Trigger: GTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAG...GAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCTCCCCGTGGCTAGAATaGACAAAGCCCAACTGTCCC +
Preference number: 2 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLSPWLE*TKPNCP
Trigger: GGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGA...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCGCTGCCCCAGCCCGTTaGTTTGGAGCACAGGCCTTA +
Preference number: 2 (lower is better)
Translates to: QALWLHFHDLCKNATQCVAAPAR*FGAQAL
Trigger: TAAGGCCTGTGCTCCAAAGCAACGGGCTGGGGCAGC...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTGCTGCCCCAGCCCGTTaGTTTGGAGCACAGGCCTTA +
Preference number: 2 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFAAPAR*FGAQAL
Trigger: TAAGGCCTGTGCTCCAAAGCAACGGGCTGGGGCAGC...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCCCCACACCCCACAGCTaGTGTGCATGGGTACTCCTG +
Preference number: 2 (lower is better)
Translates to: QALWLHFHDLCKNATQCVPTPHS*CAWVLL
Trigger: CAGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGG...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCGTGACCTTTAACTTGTaGCATGCCCTGAGAAGCCAT +
Preference number: 2 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVVTFNL*HALRSH
Trigger: ATGGCTTCTCAGGGCATGCCACAAGTTAAAGGTCAC...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTGTGACCTTTAACTTGTaGCATGCCCTGAGAAGCCAT +
Preference number: 2 (lower is better)
Translates to: GRWWWYHQPLGTGAYAALVTFNL*HALRSH
Trigger: ATGGCTTCTCAGGGCATGCCACAAGTTAAAGGTCAC...AAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCATACTGTCCTGACAAGTaGCATCCGTCAAGCAACTTC +
Preference number: 2 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAYCPDK*HPSSNF
Trigger: GAAGTTGCTTGACGGATGCCACTTGTCAGGACAGTA...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCTCTGGGACCAGAGACTaGGTGTTTCTAAACATTTTG +
Preference number: 2 (lower is better)
Translates to: IINHWAQGHMQHFQERGASGTRD*VFLNIL
Trigger: CAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGA...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTCTGTGGGGAGACCATTaGCATGGATCTGGCTCAAAG +
Preference number: 2 (lower is better)
Translates to: IPFIPVARMNKAQLSHMALWGDH*HGSGSK
Trigger: CTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAG...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTGCACAGCTGCCACCATaGCATGCCTTGGGCATTGGA +
Preference number: 2 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFAQLPP*HALGIG
Trigger: TCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGC...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGCCCCAGAGTCATCTGTaGTCCAAAGCAATGGGCGGG +
Preference number: 2 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLPQSHL*SKAMGG
Trigger: CCCGCCCATTGCTTTGGAGCACAGATGACTCTGGGG...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCCGGTGTCATGTGCTGTaGGCAAAAGTCCCTGATGTC +
Preference number: 2 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLRCHVL*AKVPDV
Trigger: GACATCAGGGACTTTTGCCCACAGCACATGACACCG...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTTGGGACTCTGCCAGATaGGCTGAGGCTGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTWDSAR*AEAAVP
Trigger: TGGAACTGCAGCCTCAGCCCATCTGGCAGAGTCCCA...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTGGGACTCTGCCAGATaGGCTGAGGCTGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLWDSAR*AEAAVP
Trigger: TGGAACTGCAGCCTCAGCCCATCTGGCAGAGTCCCA...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCGGTATCATCAACCACTaGGCACAGGGGCATATGCAG +
Preference number: 2 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLGIINH*AQGHMQ
Trigger: CTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCTGGGTAGGCAGGTGGTaGTGGTATCATCAACCACTG +
Preference number: 2 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLWVGRW*WYHQPL
Trigger: CAGTGGTTGATGATACCACCACCACCTGCCTACCCA...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTTACCAGAACACCACCTaGAGATGCCCACACCCCACA +
Preference number: 2 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTYQNTT*RCPHPT
Trigger: TGTGGGGTGTGGGCATCTTCAGGTGGTGTTCTGGTA...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTGTTACCACCCTCCATaGAGGCCACTCCCTAGTGAC +
Preference number: 2 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLCYHPP*RPLPSD
Trigger: GTCACTAGGGAGTGGCCTTCATGGAGGGTGGTAACA...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTGCTGGAGTCAAGGCTTaGGGTCTTGGGGTATGCTTC +
Preference number: 2 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTAGVKA*GLGVCF
Trigger: GAAGCATACCCCAAGACCCCAAGCCTTGACTCCAGC...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGACATTTTGGCTGGACTaGGGTGCTGTTACCACCCTC +
Preference number: 2 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLTFWLD*GAVTTL
Trigger: GAGGGTGGTAACAGCACCTCAGTCCAGCCAAAATGT...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTGATGTCCAGGCTCTCTaGCTCCATTTTCATGACTTG +
Preference number: 2 (lower is better)
Translates to: FIPVARMNKAQLSHMASGDVQAL*LHFHDL
Trigger: CAAGTCATGAAAATGGAGCCAGAGAGCCTGGACATC...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTCCATTGCCATGGATCTaGCTCAAAGGCAACAAGGGC +
Preference number: 2 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFPLPWI*LKGNKG
Trigger: GCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGG...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCCCATGGGTAGGCAGGTaGTGGTGGTATCATCAACCA +
Preference number: 2 (lower is better)
Translates to: QALWLHFHDLCKNATQCVPWVGR*WWYHQP
Trigger: TGGTTGATGATACCACCACCACCTGCCTACCCATGG...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CAA 90 bp GCAAAAGTCCCTGATGTCCAGGCTCTCTGGCTCCATTTTCATGACTaGTGCAAGAATGCAACACAGTGTGTCTTACATCCTGCCTCTGTG +
Preference number: 2 (lower is better)
Translates to: AKVPDVQALWLHFHD*CKNATQCVLHPASV
Trigger: CACAGAGGCAGGATGTAAGACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTGGACATCAGGGACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CAA 90 bp CAGGTACTTAAACCACTGGCCAAGTCCCTTTCTCTGAAAAAGAACTaGAGCTGGCTAACTGCCCTGTGCAGAGGTGTTAGTGGTTCCAAA +
Preference number: 2 (lower is better)
Translates to: QVLKPLAKSLSLKKN*SWLTALCRGVSGSK
Trigger: TTTGGAACCACTAACACCTCTGCACAGGGCAGTTAGCCAGCTCAAGTTCTTTTTCAGAGAAAGGGACTTGGCCAGTGGTTTAAGTACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp TGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAACACCACCTGAAGATCCCACACCCCACAGCTaGTGTGCATGGGTACTCCAG +
Preference number: 2 (lower is better)
Translates to: WFPSYSYSNNFTRTPPEDPTPHS*CAWVLQ
Trigger: CTGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGG...ATCTTCAGGTGGTGTTCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398245.8
3UTR-3UTR TCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAACCCTCCCTAGGCAGATaGGTCTTGAGAATGGGCAGC +
Preference number: 2 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQPSLGR*VLRMGS
Trigger: GCTGCCCATTCTCAAGACTCATCTGCCTAGGGAGGG...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR TCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAAATGGCAGGGCAGCTGTaGGGTGTGTCTATGCTGGGT +
Preference number: 2 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQMAGQL*GVSMLG
Trigger: ACCCAGCATAGACACACCTCACAGCTGCCCTGCCAT...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAACCCAACTGTCCCACATaGCTTCAGGTGCTGTGCTGG +
Preference number: 2 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQPNCPT*LQVLCW
Trigger: CCAGCACAGCACCTGAAGCCATGTGGGACAGTTGGG...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAAGGTATCATCAACCACTaGGCACAGGGGCATATGCAG +
Preference number: 2 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQGIINH*AQGHMQ
Trigger: CTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTATAAAATCTCTGCAATaGAAAAGATCCCTTTCATCC +
Preference number: 2 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFIKSLQ*KRSLSS
Trigger: GGATGAAAGGGATCTTTTGCATTGCAGAGATTTTAT...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAAGTATCCTGTGCAATCTaGTGTGAAGACCAGGTTGGG +
Preference number: 2 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQVSCAI*CEDQVG
Trigger: CCCAACCTGGTCTTCACACCAGATTGCACAGGATAC...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR GCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAAAAGGAAAGAGCTCTATaGTACTTGCTGTGTTGTAAG +
Preference number: 2 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQKERAL*YLLCCK
Trigger: CTTACAACACAGCAAGTAGCATAGAGCTCTTTCCTT...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 72 bp GCATGGGTACTCCAGGGCATCCTGAGCGGGCCCGGCTaGGGTGGGGATGGGGTCCGAGGGCCTAGGCGCACC +
Preference number: 3 (lower is better)
Translates to: AWVLQGILSGPG*GGDGVRGPRRT
Trigger: GGTGCGCCTAGGCCCTCGGACCCCATCCCCACCCCAGCCGGGCCCGCTCAGGATGCCCTGGAGTACCCATGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398245.8
3UTR CCA 72 bp TCCCAGAGCACTGCTGCCAGCCACGAGGCCTACCAGTaGGATCTAGGCCCGAGAGCCCTCCATCTGACAGAG +
Preference number: 3 (lower is better)
Translates to: SQSTAASHEAYQ*DLGPRALHLTE
Trigger: CTCTGTCAGATGGAGGGCTCTCGGGCCTAGATCCCACTGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR TCA 72 bp GGGCCAGCTGCCTCGTCAGCTGCCTCGTCTGAGAGGTaGAGGGGCAGGTACTTAAACCACTGGCCAAGTCCC +
Preference number: 3 (lower is better)
Translates to: GPAASSAASSER*RGRYLNHWPSP
Trigger: GGGACTTGGCCAGTGGTTTAAGTACCTGCCCCTTCACCTCTCAGACGAGGCAGCTGACGAGGCAGCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 72 bp GGGGCTTTAAGAGTCTCCAGCGGCCAGGGCTCTGCATaGCAGGGCAGCTGTGAGGTGTGTCTATGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: GALRVSSGQGSA*QGSCEVCLCWV
Trigger: CACCCAGCATAGACACACCTCACAGCTGCCCTGCCATGCAGAGCCCTGGCCGCTGGAGACTCTTAAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR GCA 72 bp GGCTCTGCATGGCAGGGCAGCTGTGAGGTGTGTCTATaGTGGGTGGCAGGGGTCAGATGCCCTGTAATGAGC +
Preference number: 3 (lower is better)
Translates to: GSAWQGSCEVCL*WVAGVRCPVMS
Trigger: GCTCATTACAGGGCATCTGACCCCTGCCACCCAGCATAGACACACCTCACAGCTGCCCTGCCATGCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 72 bp AAGCCCAACTGTCCCACATGGCTTCAGGTGCTGTGCTaGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCG +
Preference number: 3 (lower is better)
Translates to: KPNCPTWLQVLC*SPACEQAGQLS
Trigger: CGACAGCTGCCCAGCCTGTTCACATGCTGGGGACCAGCACAGCACCTGAAGCCATGTGGGACAGTTGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 72 bp ACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTaGGGTCTTGGGGTATGCTTCCAGCAGCCAGCAGGT +
Preference number: 3 (lower is better)
Translates to: TGLPVGAAGVKA*GLGVCFQQPAG
Trigger: ACCTGCTGGCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
3UTR CCA 72 bp GGCTCAGTCCTGCGGTCTGTGGGGAGACCATTGCCATaGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGG +
Preference number: 3 (lower is better)
Translates to: GSVLRSVGRPLP*IWLKGNKGTVG
Trigger: CCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGACTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR TCA 72 bp CACATGGCTTCAGGTGCTGTGCTGGTCCCCAGCATGTaGACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGT +
Preference number: 3 (lower is better)
Translates to: HMASGAVLVPSM*TGWAAVGVMCC
Trigger: ACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACCAGCACAGCACCTGAAGCCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR GCA 72 bp CTCCAGGCTCAGTCCTGCGGTCTGTGGGGAGACCATTaGCATGGATCTGGCTCAAAGGCAACAAGGGCACTG +
Preference number: 3 (lower is better)
Translates to: LQAQSCGLWGDH*HGSGSKATRAL
Trigger: CAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGACTGAGCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR GCA 72 bp GGTGGTCTCACTGCCCTCCTAAACAGAGCCCACCTCTaGCCCCAGAGTCATCTGTGCTCCAAAGCAATGGGC +
Preference number: 3 (lower is better)
Translates to: GGLTALLNRAHL*PQSHLCSKAMG
Trigger: GCCCATTGCTTTGGAGCACAGATGACTCTGGGGGCAGAGGTGGGCTCTGTTTAGGAGGGCAGTGAGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 72 bp GATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTaGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTG +
Preference number: 3 (lower is better)
Translates to: DLAQRQQGHCRD*TSCGRSWSQGL
Trigger: CAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
3UTR CCA 72 bp GTCCTGCGGTCTGTGGGGAGACCATTGCCATGGATCTaGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGA +
Preference number: 3 (lower is better)
Translates to: VLRSVGRPLPWI*LKGNKGTVGTG
Trigger: TCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 72 bp TCTGCATGGCAGGGCAGCTGTGAGGTGTGTCTATGCTaGGTGGCAGGGGTCAGATGCCCTGTAATGAGCCAC +
Preference number: 3 (lower is better)
Translates to: SAWQGSCEVCLC*VAGVRCPVMSH
Trigger: GTGGCTCATTACAGGGCATCTGACCCCTGCCACCCAGCATAGACACACCTCACAGCTGCCCTGCCATGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CAA 90 bp GGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCTCAAGGCTTGGGGTCTaGGGGTATGCTTCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: GRQVVVVSSTTGHRGICSSRLGV*GYASSS
Trigger: GCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTGA...GCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CAA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTCAGCCCTGGGGGATaGGGGTCAGCTATGCTGTCT +
Preference number: 3 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAALSPGG*GSAMLS
Trigger: AGACAGCATAGCTGACCCCAATCCCCCAGGGCTGAG...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR GCA 72 bp CTAGAGCCAACACCGGTCTCTGAAACCCAGAAGGGCTaGCCAACTAACAGCACCTCCCTCTTGGCCAAAGGC +
Preference number: 3 (lower is better)
Translates to: LEPTPVSETQKG*PTNSTSLLAKG
Trigger: GCCTTTGGCCAAGAGGGAGGTGCTGTTAGTTGGGCAGCCCTTCTGGGTTTCAGAGACCGGTGTTGGCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 72 bp ATGAGCCACAGAAACTTGGGCCCATGGGTAGGCAGGTaGTGGTGGTATCATCAACCACTGGGCACAGGGGCA +
Preference number: 3 (lower is better)
Translates to: MSHRNLGPWVGR*WWYHQPLGTGA
Trigger: TGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTTTCTGTGGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CAA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGTCTGTGGGGAGACCATaGCCATGGATCTGGCTCAAA +
Preference number: 3 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRSVGRP*PWIWLK
Trigger: TTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGA...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CAA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGCTCCATTTTCATGACTaGTGCAAGAATGCAACACAG +
Preference number: 3 (lower is better)
Translates to: SNGRGHSCHHAMPWALEELHFHD*CKNATQ
Trigger: CTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAG...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CAA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTGACCCATTTCCCACTTaGGGAGGCCGAGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFDPFPT*GGRGRW
Trigger: CCACCTGCCTCGGCCTCCCAAAGTGGGAAATGGGTC...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR TCA 72 bp ATTTTGGCTGGACTGAGGTGCTGTTACCACCCTCCATaGAGGCCACTCCCTAGTGACAGCCCTAACAGCATG +
Preference number: 3 (lower is better)
Translates to: ILAGLRCCYHPP*RPLPSDSPNSM
Trigger: CATGCTGTTAGGGCTGTCACTAGGGAGTGGCCTTCATGGAGGGTGGTAACAGCACCTCAGTCCAGCCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 72 bp CATCAAGATAGACAAGACCCAGTATCCTGTGCAATCTaGTGTGAAGACCAGGTTGGGTGGGCAGCTGCAGGC +
Preference number: 3 (lower is better)
Translates to: HQDRQDPVSCAI*CEDQVGWAAAG
Trigger: GCCTGCAGCTGCCCACCCAACCTGGTCTTCACACCAGATTGCACAGGATACTGGGTCTTGTCTATCTTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 72 bp AGGCTTTGTCTAGGGTTGAGAAGCAATTTGGCTGGGTaGTCTCACTGCCCTCCTAAACAGAGCCCACCTCTG +
Preference number: 3 (lower is better)
Translates to: RLCLGLRSNLAG*SHCPPKQSPPL
Trigger: CAGAGGTGGGCTCTGTTTAGGAGGGCAGTGAGACCACCCAGCCAAATTGCTTCTCAACCCTAGACAAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR GCA 72 bp GAGCAGGACCCAGGAGTGCAGGGATGGTATCACTGTTaGCCCTTTGAAAATGACCCATTTCCCACTTTGGGA +
Preference number: 3 (lower is better)
Translates to: EQDPGVQGWYHC*PFENDPFPTLG
Trigger: TCCCAAAGTGGGAAATGGGTCATTTTCAAAGGGGCAACAGTGATACCATCCCTGCACTCCTGGGTCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CAA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCGTGTTTCTAAACATTTaGGCTGGACTGAGGTGCTGT +
Preference number: 3 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVVFLNI*AGLRCC
Trigger: ACAGCACCTCAGTCCAGCCAAAATGTTTAGAAACAC...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CAA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGCTATTACTGTTTTACTaGAAGGTGATTACCCCTCAA +
Preference number: 3 (lower is better)
Translates to: SNGRGHSCHHAMPWALEELLLFY*KVITPQ
Trigger: TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAG...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 72 bp TGGGCATTGGAAGAGCAGGACCCAGGAGTGCAGGGATaGTATCACTGTTGCCCCTTTGAAAATGACCCATTT +
Preference number: 3 (lower is better)
Translates to: WALEEQDPGVQG*YHCCPFENDPF
Trigger: AAATGGGTCATTTTCAAAGGGGCAACAGTGATACCATCCCTGCACTCCTGGGTCCTGCTCTTCCAATGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CAA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTTCTGTGGGGAGACCATaGCCATGGATCTGGCTCAAA +
Preference number: 3 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFSVGRP*PWIWLK
Trigger: TTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGA...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR TCA 72 bp TCAGCTATGCTGTCTCCAGACACTCACATACTGTCCTaGCAAGTGGCATCCGTCAAGCAACTTCTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: SAMLSPDTHILS*QVASVKQLLSP
Trigger: TGGAGAGAGAAGTTGCTTGACGGATGCCACTTGTCAGGACAGTATGTGAGTGTCTGGAGACAGCATAGCTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 72 bp GTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCTaGCTCCATTTTCATGACTTGTGCAAGAATGCAACA +
Preference number: 3 (lower is better)
Translates to: VLWAKVPDVQAL*LHFHDLCKNAT
Trigger: TGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTGGACATCAGGGACTTTTGCCCACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CAA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTGTGTTTCTAAACATTTaGGCTGGACTGAGGTGCTGT +
Preference number: 3 (lower is better)
Translates to: FIPVARMNKAQLSHMASGVFLNI*AGLRCC
Trigger: ACAGCACCTCAGTCCAGCCAAAATGTTTAGAAACAC...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CAA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTCTCCATTTTCATGACTaGTGCAAGAATGCAACACAG +
Preference number: 3 (lower is better)
Translates to: FIPVARMNKAQLSHMASGLHFHD*CKNATQ
Trigger: CTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAG...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR-3UTR CAA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAAATGAGCCACAGAAACTaGGGCCCATGGGTAGGCAGG +
Preference number: 3 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQMSHRN*GPWVGR
Trigger: CCTGCCTACCCATGGGCCCAAGTTTCTGTGGCTCAT...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CCA 72 bp AAAGAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTaGGCAGGAACCCCTCTTCTCCATCAAGATAGACAA +
Preference number: 3 (lower is better)
Translates to: KELYATCCVVRS*AGTPLLHQDRQ
Trigger: TTGTCTATCTTGATGGAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR TCA 72 bp CAGCATGTGCACTGTCTAAATCACATCCCACCATCCTaGAAACTTCATTTCCTCCCACTGGTTTCCTTCATA +
Preference number: 3 (lower is better)
Translates to: QHVHCLNHIPPS*KLHFLPLVSFI
Trigger: TATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGGATGGTGGGATGTGATTTAGACAGTGCACATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GCCCACACCCCACAGCTGCTGTGCATGGGTACTCCAGGGCATCCTGAGCGGGCCACGGGCACAGGCAGTTaGACAAAGTCCCCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: AHTPQLLCMGTPGHPERATGTGS*TKSPGS
Trigger: CGAGCCCGGGGACTTTGTGCAACTGCCTGTGCCCGT...GGCCCGCTCAGGATGCCCTGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398245.8
CDS-3UTR GCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTGGGCAGCTGCAGGCTaGCCCAGCCCGTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGWAAAG*PSPLLW
Trigger: CCAAAGCAACGGGCTGGGGCAGCCTGCAGCTGCCCA...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGAGCTTCCGCTTCGGCTaGGGCGGGAGGGCGGTCGGT +
Preference number: 4 (lower is better)
Translates to: QGHCRDWTSCGRSWSQGLSFRFG*GGRAVG
Trigger: ACCGACCGCCCTCCCGCCCCAGCCGAAGCGGAAGCT...CAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
CDS-3UTR GCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACCGCCACCGCCGCCGCTaGGGAGGAGAGAACGGGAGG +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDRHRRR*GGENGR
Trigger: CCTCCCGTTCTCTCCTCCGCAGCGGCGGCGGTGGCG...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407471.7
ENST00000435822.6
CDS-3UTR GCA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGAGAGCGGCGGCCCCGCTaGCTCCGCCTCCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QHTALADKAAVPVSEFLGERRPR*LRLRPH
Trigger: ATGAGGACGGAGGCGGAGGCAGCGGGGCCGCCGCTC...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402766.5
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
CDS-3UTR GCA 90 bp GGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCGAGCGGCGGCCCCGCTaGCTCCGCCTCCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GRQVVVVSSTTGHRGICSERRPR*LRLRPH
Trigger: ATGAGGACGGAGGCGGAGGCAGCGGGGCCGCCGCTC...GCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407471.7
ENST00000435822.6
CDS-3UTR GCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGCCCTCTCTGGCTCTTTaGCGGCCCCAAGGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGPSLAL*RPQGSL
Trigger: CAACGACCCTTGGGGCCGGCAAAGAGCCAGAGAGGG...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp GAAGATGCCCACACCCCACAGCTGCTGTGCATGGGTACTCCAGGGCATCCTGAGAGCTTCCGCTTCGGCTaGGGCGGGAGGGCGGTCGGT +
Preference number: 4 (lower is better)
Translates to: EDAHTPQLLCMGTPGHPESFRFG*GGRAVG
Trigger: ACCGACCGCCCTCCCGCCCCAGCCGAAGCGGAAGCT...CTCAGGATGCCCTGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGGCATCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398245.8
CDS-3UTR CCA 90 bp GCCCACACCCCACAGCTGCTGTGCATGGGTACTCCAGGGCATCCTGAGCGGGCCTCGACACCCAGGGTCTaGGTACAGAAGCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: AHTPQLLCMGTPGHPERASTPRV*VQKRCL
Trigger: GAGGCACCGCTTCTGTACCCAGACCCTGGGTGTCGA...GGCCCGCTCAGGATGCCCTGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398245.8
CDS-3UTR CCA 90 bp CAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGCAGGAGAGAGGGGCCTaGAGGGGTCCTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QGHCRDWTSCGRSWSQGLQERGA*RGPQPW
Trigger: CCAGGGCTGAGGACCCCTCCAGGCCCCTCTCTCCTG...CAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CAA 72 bp CAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTaGGGCATTGGAAGAGCAGGACCCAGGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QWAGAQLPPCHA*GIGRAGPRSAG
Trigger: CCCTGCACTCCTGGGTCCTGCTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGGCTCCACCACTGTCCTaGGCAGACTCCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGAPPLS*ADSQDW
Trigger: CCAGTCTTGGGAGTCTGCTCAGGACAGTGGTGGAGC...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGAGCGGCGGCCCCGCTaGCTCCGCCTCCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTERRPR*LRLRPH
Trigger: ATGAGGACGGAGGCGGAGGCAGCGGGGCCGCCGCTC...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407471.7
ENST00000435822.6
CDS-3UTR GCA 90 bp GCCCACACCCCACAGCTGCTGTGCATGGGTACTCCAGGGCATCCTGAGCGGGCCCCACATGGCTTCAGGTaGTGTGCTGGTCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: AHTPQLLCMGTPGHPERAPHGFR*CAGPQH
Trigger: ATGCTGGGGACCAGCACAGCACCTGAAGCCATGTGG...GGCCCGCTCAGGATGCCCTGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398245.8
CDS-3UTR CCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGAAGCTTCCGCTTCGGCTaGGGCGGGAGGGCGGTCGGT +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARSFRFG*GGRAVG
Trigger: ACCGACCGCCCTCCCGCCCCAGCCGAAGCGGAAGCT...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402766.5
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
CDS-3UTR CCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCAGCTTCCGCTTCGGCTaGGGCGGGAGGGCGGTCGGT +
Preference number: 4 (lower is better)
Translates to: IINHWAQGHMQHFQERGASFRFG*GGRAVG
Trigger: ACCGACCGCCCTCCCGCCCCAGCCGAAGCGGAAGCT...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407471.7
ENST00000435822.6
CDS-3UTR CCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCCTGTGGGCGCAGCTaGAGTCAAGGCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGSCGRS*SQGLGS
Trigger: AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGA...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGGCACTGTCGGGACTaGACTTCCTGTGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: KGTVGTGLPVGAAGVKAWGHCRD*TSCGRS
Trigger: GCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC...CCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGCCCAGCCCGTTGCTTTaGAGCACAGGCCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGPSPLL*STGLSS
Trigger: GCTGCTAAGGCCTGTGCTCCAAAGCAACGGGCTGGG...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTGTGAGCACCCTCTCTaGCTCTTTGCCGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGCEHPL*LFAGPK
Trigger: CTTGGGGCCGGCAAAGAGCCAGAGAGGGTGCTCACA...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR TCA 90 bp GGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCGGTAGAGCTGCTGGATaGCGGGCACAGGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: GPMGRQVVVVSSTTGHRGGRAAG*RAQAVA
Trigger: TGCAACTGCCTGTGCCCGTCATCCAGCAGCTCTACC...GCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCGTCAGCTGCCTCGTCTaGGAGGTGAAGGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: GPMGRQVVVVSSTTGHRGVSCLV*EVKGQV
Trigger: TACCTGCCCCTTCACCTCTCAGACGAGGCAGCTGAC...GCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GCCCACACCCCACAGCTGCTGTGCATGGGTACTCCAGGGCATCCTGAGCGGGCCTGTTACCACCCTCCATaGAGGCCACTCCCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: AHTPQLLCMGTPGHPERACYHPP*RPLPSD
Trigger: GTCACTAGGGAGTGGCCTTCATGGAGGGTGGTAACA...GGCCCGCTCAGGATGCCCTGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398245.8
CDS-3UTR GCA 90 bp GGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGACGCCACCGCCGCCGCTaGGGAGGAGAGAACGGGAGG +
Preference number: 4 (lower is better)
Translates to: GGIINHWAQGHMQHFQERRHRRR*GGENGR
Trigger: CCTCCCGTTCTCTCCTCCGCAGCGGCGGCGGTGGCG...TCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407471.7
ENST00000435822.6
CDS-3UTR GCA 90 bp GGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAACGGGCACAGGCAGTTaGACAAAGTCCCCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GPQHVNRLGSCRCHVLWATGTGS*TKSPGS
Trigger: CGAGCCCGGGGACTTTGTGCAACTGCCTGTGCCCGT...TGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
CDS-3UTR GCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGATGCTCCTGGTCAGCTaGAGCTTCTGCAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGMLLVS*SFCRAL
Trigger: GAGAGCCCTGCAGAAGCTGCAGCTGACCAGGAGCAT...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ACAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTCTTGGCCCAACCTCCTaGTGTCCCCGGTCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: TRALSGLDFLWAQLESRLLGPTS*CPRSEG
Trigger: GCCCTCAGACCGGGGACAGCAGGAGGTTGGGCCAAG...AAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTCACTGTCGTCCAGCTaGCCCAGGTACCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSSLSSS*PRYRST
Trigger: GGTGCTGCGGTACCTGGGCCAGCTGGACGACAGTGA...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTGGGACTCTGCCAGATaGGCTGAGGCTGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGWDSAR*AEAAVP
Trigger: TGGAACTGCAGCCTCAGCCCATCTGGCAGAGTCCCA...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGTGTCAGGAGGCCTCCTaGGTGCAGGGATCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KGTVGTGLPVGAAGVKAWCQEAS*VQGSLW
Trigger: CCAGAGGGATCCCTGCACCCAGGAGGCCTCCTGACA...CCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTGCAGACTCCCAAGACTaGGCCAGCTGCCTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSADSQD*ASCLVS
Trigger: GCTGACGAGGCAGCTGGCCCAGTCTTGGGAGTCTGC...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGCGTCCAGCCTGTCCTTaGTGTGGGGTGCTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGRPACP*CGVLGS
Trigger: ACTTCCAAGCACCCCACACCAAGGACAGGCTGGACG...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGGGAAGTCCTGGCCCTTaGCCCAACCTCCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWGSPGP*PNLLLS
Trigger: GGACAGCAGGAGGTTGGGCCAAGGGCCAGGACTTCC...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR TCA 90 bp GGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAGCCACGCAGCACGATaGAGTGGCCCTGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: GPQHVNRLGSCRCHVLWASHAAR*SGPGSQ
Trigger: CTGACTACCAGGGCCACTTCATCGTGCTGCGTGGCT...TGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGGCCTCGTCTGAGAGGTaGAGGGGCAGGTACTTAAAC +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGASSER*RGRYLN
Trigger: GTTTAAGTACCTGCCCCTTCACCTCTCAGACGAGGC...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGGTCAGCTGCCTCGTCTaGGAGGTGAAGGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWVSCLV*EVKGQV
Trigger: TACCTGCCCCTTCACCTCTCAGACGAGGCAGCTGAC...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CCACCTGAAGATGCCCACACCCCACAGCTGCTGTGCATGGGTACTCCAGGGCATCTGGTCCCCAGCATGTaGACAGGCTGGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PPEDAHTPQLLCMGTPGHLVPSM*TGWAAV
Trigger: GACAGCTGCCCAGCCTGTTCACATGCTGGGGACCAG...ATGCCCTGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGGCATCTTCAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398245.8
CDS-3UTR GCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACCGGGAGGGCGGTCGGTaGGTGTCGAGTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDREGGR*VSSSFS
Trigger: GGAGAAGGAACTCGACACGCACCGACCGCCCTCCCG...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402766.5
ENST00000407471.7
ENST00000435822.6
CDS-3UTR GCA 90 bp GCAGCCAACCTTAAAGGACTAGGGGCTCCCCACACTCAAGAGGGCAGACCCTGCACGGGCACAGGCAGTTaGACAAAGTCCCCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: AANLKGLGAPHTQEGRPCTGTGS*TKSPGS
Trigger: CGAGCCCGGGGACTTTGTGCAACTGCCTGTGCCCGT...GCAGGGTCTGCCCTCTTGAGTGTGGGGAGCCCCTAGTCCTTTAAGGTTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407471.7
ENST00000435822.6
CDS-3UTR GCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTTCCCAGAGCACTGCTaGCAGCCACGAGGCCTACCA +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSFPEHC*QPRGLP
Trigger: TGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAA...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGCAAGAGGGCAGACCCTaGTGTCAGGATTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGQEGRP*CQDFGW
Trigger: CCAGCCAAAATCCTGACAGCAGGGTCTGCCCTCTTG...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGGCTGCCCCAGCCCGTTaGTTTGGAGCACAGGCCTTA +
Preference number: 4 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWAAPAR*FGAQAL
Trigger: TAAGGCCTGTGCTCCAAAGCAACGGGCTGGGGCAGC...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTGGGCAGCTGCAGGCTaGCCCAGCCCGTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDWAAAG*PSPLLW
Trigger: CCAAAGCAACGGGCTGGGGCAGCCTGCAGCTGCCCA...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCAGGGCGGGGGCACAGCTaGCACCATGCCATGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAGRGHS*HHAMPW
Trigger: CCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCC...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAACCCCACAGCTGCTGTaGATGGGTACTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GPQHVNRLGSCRCHVLWATPQLL*MGTPGP
Trigger: TGGCCCAGGAGTACCCATGCACAGCAGCTGTGGGGT...TGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCCCGCGTCTCCGCCTTaGCGTCCAGCCTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASPASPP*RPACPW
Trigger: CCAAGGACAGGCTGGACGGCAAGGCGGAGACGCGGG...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR GCA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACCCGCGTCTCCGCCTTaGCGTCCAGCCTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CGLWGDHCHGSGSKATRAPASPP*RPACPW
Trigger: CCAAGGACAGGCTGGACGGCAAGGCGGAGACGCGGG...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTCCTGTGGGCGCAGCTaGAGTCAAGGCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSSCGRS*SQGLGS
Trigger: AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGA...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGACTGGACTTCCTGTaGGCGCAGCTGGAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: KGTVGTGLPVGAAGVKAWGLDFL*AQLESR
Trigger: CCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCC...CCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCGGGCACTGTCGGGACTaGACTTCCTGTGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: IINHWAQGHMQHFQERGAGHCRD*TSCGRS
Trigger: GCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCAGGAGAGAGGGGCCTaGAGGGGTCCTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVQERGA*RGPQPW
Trigger: CCAGGGCTGAGGACCCCTCCAGGCCCCTCTCTCCTG...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCACGAGGCCTACCAGTaGGATCTAGGCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCHEAYQ*DLGPRA
Trigger: GGCTCTCGGGCCTAGATCCCACTGGTAGGCCTCGTG...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCACCCAGCCCGTTGCTTTaGAGCACAGGCCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPQHVNRLGSCRCHVLWAPSPLL*STGLSS
Trigger: GCTGCTAAGGCCTGTGCTCCAAAGCAACGGGCTGGG...TGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGTGCTTGGGGTGAGTaGCATGACAACACACGGCAC +
Preference number: 4 (lower is better)
Translates to: QGHCRDWTSCGRSWSQGLGAWGE*HDNTRH
Trigger: GTGCCGTGTGTTGTCATGTCACTCACCCCAAGCACC...CAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCCGAGAGCCCTCCATCTaGCAGAGCTGGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALREPSI*QSWRTW
Trigger: CCAGGTCCTCCAGCTCTGTCAGATGGAGGGCTCTCG...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGCCCTCCCTAGGCAGATaGGTCTTGAGAATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SNGRGHSCHHAMPWALEEPSLGR*VLRMGS
Trigger: GCTGCCCATTCTCAAGACTCATCTGCCTAGGGAGGG...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTCGCCACCGCCGCCGCTaGGGAGGAGAGAACGGGAGG +
Preference number: 4 (lower is better)
Translates to: IPFIPVARMNKAQLSHMARHRRR*GGENGR
Trigger: CCTCCCGTTCTCTCCTCCGCAGCGGCGGCGGTGGCG...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
CDS-3UTR GCA 90 bp ACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTACGGGCACAGGCAGTTaGACAAAGTCCCCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: TRHWQTKQLCQSPSSWDSTGTGS*TKSPGS
Trigger: CGAGCCCGGGGACTTTGTGCAACTGCCTGTGCCCGT...AGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402766.5
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
CDS-3UTR GCA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGGGTCGATGGTCCAGATaGTCCTGGTCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWGRWSR*SWSAAA
Trigger: AGCTGCAGCTGACCAGGAGCATCTGGACCATCGACC...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGTGGGTACAGAAGCGGTaGCTCACGCCAAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWWVQKR*LTPKWC
Trigger: GCACCACTTTGGCGTGAGGCACCGCTTCTGTACCCA...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGTGGGTACAGAAGCGGTaGCTCACGCCAAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SNGRGHSCHHAMPWALEEWVQKR*LTPKWC
Trigger: GCACCACTTTGGCGTGAGGCACCGCTTCTGTACCCA...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACAGGAGGCCTCCTGGGTaGAGGGATCCCTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: DHCHGSGSKATRALSGLDRRPPG*RDPSGA
Trigger: AGCCCCAGAGGGATCCCTGCACCCAGGAGGCCTCCT...GTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTAGGAGGCCTCCTGGGTaGAGGGATCCCTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GRWWWYHQPLGTGAYAALRRPPG*RDPSGA
Trigger: AGCCCCAGAGGGATCCCTGCACCCAGGAGGCCTCCT...AAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCATGGGCAGCTGCAGGCTaGCCCAGCCCGTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAWAAAG*PSPLLW
Trigger: CCAAAGCAACGGGCTGGGGCAGCCTGCAGCTGCCCA...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp AAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGCACAGCTGCCACCATaGCATGCCTTGGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: KGTVGTGLPVGAAGVKAWAQLPP*HALGIG
Trigger: TCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGC...CCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGCGGGGGCACAGCTaGCACCATGCCATGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GGIINHWAQGHMQHFQERGRGHS*HHAMPW
Trigger: CCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCC...TCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCACCCCAGAGTCATCTGTaGTCCAAAGCAATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GPQHVNRLGSCRCHVLWAPQSHL*SKAMGG
Trigger: CCCGCCCATTGCTTTGGAGCACAGATGACTCTGGGG...TGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCGAAACCCAGAAGGGCTaGCCAACTAACAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: GPMGRQVVVVSSTTGHRGETQKG*PTNSTS
Trigger: GGAGGTGCTGTTAGTTGGGCAGCCCTTCTGGGTTTC...GCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCACCCCACAGCTGCTGTaGATGGGTACTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCTPQLL*MGTPGP
Trigger: TGGCCCAGGAGTACCCATGCACAGCAGCTGTGGGGT...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACCGCAGCACCATCCTaGAGCAGGCCAGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GRQVVVVSSTTGHRGICSTAAPS*SRPGHS
Trigger: ACTGTGGCCTGGCCTGCTCCAGGATGGTGCTGCGGT...GCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGACCGCAGCACCATCCTaGAGCAGGCCAGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMTAAPS*SRPGHS
Trigger: ACTGTGGCCTGGCCTGCTCCAGGATGGTGCTGCGGT...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATCACTGTCGTCCAGCTaGCCCAGGTACCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARSLSSS*PRYRST
Trigger: GGTGCTGCGGTACCTGGGCCAGCTGGACGACAGTGA...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCTCACTGTCGTCCAGCTaGCCCAGGTACCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GRQVVVVSSTTGHRGICSSLSSS*PRYRST
Trigger: GGTGCTGCGGTACCTGGGCCAGCTGGACGACAGTGA...GCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGGGTAGGCCAGGTCGATaGTCCAGATGCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SNGRGHSCHHAMPWALEEGRPGR*SRCSWS
Trigger: TGACCAGGAGCATCTGGACCATCGACCTGGCCTACC...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCTCGACACCCAGGGTCTaGGTACAGAAGCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCSTPRV*VQKRCL
Trigger: GAGGCACCGCTTCTGTACCCAGACCCTGGGTGTCGA...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCCGGCAGAAGCAGTGGTaGCCACTGGGGGTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GRQVVVVSSTTGHRGICSRQKQW*PLGVKQ
Trigger: CTGCTTCACCCCCAGTGGCCACCACTGCTTCTGCCG...GCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCGTGCGGCAGAAGCAGTaGTGGCCACTGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GRQVVVVSSTTGHRGICSVRQKQ*WPLGVK
Trigger: CTTCACCCCCAGTGGCCACCACTGCTTCTGCCGCAC...GCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGAGAAGATGCAGCCAGTaGCCCGGTTGTAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: SNGRGHSCHHAMPWALEERRCSQ*PGCSHA
Trigger: TGCGTGGCTACAACCGGGCCACTGGCTGCATCTTCT...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCAGGAGAGAGGGGCCTaGAGGGGTCCTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VSDMTTHGTGRQSSCASLQERGA*RGPQPW
Trigger: CCAGGGCTGAGGACCCCTCCAGGCCCCTCTCTCCTG...GAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTGGGTAGGCAGGTGGTaGTGGTATCATCAACCACTG +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGWVGRW*WYHQPL
Trigger: CAGTGGTTGATGATACCACCACCACCTGCCTACCCA...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGGCAGCTGTTTATTCCCAGAGCACTGCTGCCAGCCACGAGGCCTACCAGTGGGGAGGTGTGTCTATGCTaGGTGGCAGGGGTCAGATGC +
Preference number: 4 (lower is better)
Translates to: GQLFIPRALLPATRPTSGEVCLC*VAGVRC
Trigger: GCATCTGACCCCTGCCACCCAGCATAGACACACCTC...CCCACTGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAATAAACAGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGCACGAGGCCTACCAGTaGGATCTAGGCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMHEAYQ*DLGPRA
Trigger: GGCTCTCGGGCCTAGATCCCACTGGTAGGCCTCGTG...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGTCAGGAGGCCTCCTaGGTGCAGGGATCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARCQEAS*VQGSLW
Trigger: CCAGAGGGATCCCTGCACCCAGGAGGCCTCCTGACA...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTGTCAGGAGGCCTCCTaGGTGCAGGGATCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WAAVGVMCCGQKSLMSRLCQEAS*VQGSLW
Trigger: CCAGAGGGATCCCTGCACCCAGGAGGCCTCCTGACA...GAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCTGGAAGTCCTGGCCCTTaGCCCAACCTCCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SSTTGHRGICSTSRREGPGSPGP*PNLLLS
Trigger: GGACAGCAGGAGGTTGGGCCAAGGGCCAGGACTTCC...AGGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR TCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACGGTAGAGCTGCTGGATaGCGGGCACAGGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDGRAAG*RAQAVA
Trigger: TGCAACTGCCTGTGCCCGTCATCCAGCAGCTCTACC...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCAGCCACGCAGCACGATaGAGTGGCCCTGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: WAAVGVMCCGQKSLMSRLSHAAR*SGPGSQ
Trigger: CTGACTACCAGGGCCACTTCATCGTGCTGCGTGGCT...GAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCGGTGCTTGGGGTGAGTaGCATGACAACACACGGCAC +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCGAWGE*HDNTRH
Trigger: GTGCCGTGTGTTGTCATGTCACTCACCCCAAGCACC...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTGCCTCGTCTGAGAGGTaGAGGGGCAGGTACTTAAAC +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSASSER*RGRYLN
Trigger: GTTTAAGTACCTGCCCCTTCACCTCTCAGACGAGGC...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAGCCTCGTCTGAGAGGTaGAGGGGCAGGTACTTAAAC +
Preference number: 4 (lower is better)
Translates to: GPQHVNRLGSCRCHVLWAASSER*RGRYLN
Trigger: GTTTAAGTACCTGCCCCTTCACCTCTCAGACGAGGC...TGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTGGCAGGTGGATCACCTaGGCTCAGGGGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: GRWWWYHQPLGTGAYAALGRWIT*AQGFET
Trigger: GGTCTCGAACCCCTGAGCTCAGGTGATCCACCTGCC...AAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCGCCAACACCGGTCTCTaGAACCCAGAAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVANTGL*NPEGLP
Trigger: GGGCAGCCCTTCTGGGTTTCAGAGACCGGTGTTGGC...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCAACACCGGTCTCTaGAACCCAGAAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GIINHWAQGHMQHFQERGANTGL*NPEGLP
Trigger: GGGCAGCCCTTCTGGGTTTCAGAGACCGGTGTTGGC...CCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTACCAGAACACCACCTaGAGATGCCCACACCCCACA +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSYQNTT*RCPHPT
Trigger: TGTGGGGTGTGGGCATCTTCAGGTGGTGTTCTGGTA...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCGTGGGCAAAAGTCCCTaGTGTCCAGGCTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCVGKSP*CPGSLA
Trigger: AGCCAGAGAGCCTGGACATCAGGGACTTTTGCCCAC...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACCTGGTCCCCAGCATGTaGACAGGCTGGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: DHCHGSGSKATRALSGLDLVPSM*TGWAAV
Trigger: GACAGCTGCCCAGCCTGTTCACATGCTGGGGACCAG...GTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTACGGGCACAGGCAGTTaGACAAAGTCCCCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASTGTGS*TKSPGS
Trigger: CGAGCCCGGGGACTTTGTGCAACTGCCTGTGCCCGT...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402766.5
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
CDS-3UTR GCA 90 bp GCAGCCAACCTTAAAGGACTAGGGGCTCCCCACACTCAAGAGGGCAGACCCTGCATGCTCCTGGTCAGCTaGAGCTTCTGCAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: AANLKGLGAPHTQEGRPCMLLVS*SFCRAL
Trigger: GAGAGCCCTGCAGAAGCTGCAGCTGACCAGGAGCAT...GCAGGGTCTGCCCTCTTGAGTGTGGGGAGCCCCTAGTCCTTTAAGGTTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCGGTCGATGGTCCAGATaGTCCTGGTCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCGRWSR*SWSAAA
Trigger: AGCTGCAGCTGACCAGGAGCATCTGGACCATCGACC...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GCAGCCAACCTTAAAGGACTAGGGGCTCCCCACACTCAAGAGGGCAGACCCTGCGGTCGATGGTCCAGATaGTCCTGGTCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AANLKGLGAPHTQEGRPCGRWSR*SWSAAA
Trigger: AGCTGCAGCTGACCAGGAGCATCTGGACCATCGACC...GCAGGGTCTGCCCTCTTGAGTGTGGGGAGCCCCTAGTCCTTTAAGGTTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCTCTCCACCAGCACCTTaGAGGCCTTTGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: GPMGRQVVVVSSTTGHRGSPPAP*RPLLVQ
Trigger: TTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGA...GCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGACTCCAGGCTCAGTCCTaGGGTCTGTGGGGAGACCAT +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARLQAQS*GLWGDH
Trigger: ATGGTCTCCCCACAGACCGCAGGACTGAGCCTGGAG...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGGCAGCTGTTTATTCCCAGAGCACTGCTGCCAGCCACGAGGCCTACCAGTGGGTTATTCCCAGAGCACTaGTGCCAGCCACGAGGCCTA +
Preference number: 4 (lower is better)
Translates to: GQLFIPRALLPATRPTSGLFPEH*CQPRGL
Trigger: TAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAATAA...CCCACTGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAATAAACAGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGCTTCAGGTGCTGTaGTGGTCCCCAGCATGTGAA +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSWLQVL*WSPACE
Trigger: TTCACATGCTGGGGACCAGCACAGCACCTGAAGCCA...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TCAGTCCTGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACCCCTCTCTGGCTCTTTaGCGGCCCCAAGGGTCGTTG +
Preference number: 4 (lower is better)
Translates to: SVLRSVGRPLPWIWLKGNPSLAL*RPQGSL
Trigger: CAACGACCCTTGGGGCCGGCAAAGAGCCAGAGAGGG...GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR GCA 90 bp GGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGACTTGGCCCAACCTCCTaGTGTCCCCGGTCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GGIINHWAQGHMQHFQERLGPTS*CPRSEG
Trigger: GCCCTCAGACCGGGGACAGCAGGAGGTTGGGCCAAG...TCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR GCA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGAACGGGCACAGGCAGTTaGACAAAGTCCCCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: QHTALADKAAVPVSEFLGTGTGS*TKSPGG
Trigger: ACCGCCAGGGGACTTTGTGCAACTGCCTGTGCCCGT...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTAGCTTCCGCTTCGGCTaGGGCGGGAGGGCGGTCGGT +
Preference number: 4 (lower is better)
Translates to: IPFIPVARMNKAQLSHMASFRFG*GGRAVG
Trigger: ACCGACCGCCCTCCCGCCCCAGCCGAAGCGGAAGCT...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
CDS-3UTR CCA 90 bp ACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATACCGCAGCACCATCCTaGAGCAGGCCAGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: TGRQSSCASLRVPGTLPDTAAPS*SRPGHS
Trigger: ACTGTGGCCTGGCCTGCTCCAGGATGGTGCTGCGGT...ATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGACCGCAGCACCATCCTaGAGCAGGCCAGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: GIINHWAQGHMQHFQERGTAAPS*SRPGHS
Trigger: ACTGTGGCCTGGCCTGCTCCAGGATGGTGCTGCGGT...CCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTTCACTGTCGTCCAGCTaGCCCAGGTACCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GRWWWYHQPLGTGAYAALSLSSS*PRYRST
Trigger: GGTGCTGCGGTACCTGGGCCAGCTGGACGACAGTGA...AAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGTCACTGTCGTCCAGCTaGCCCAGGTACCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GDHCHGSGSKATRALSGLSLSSS*PRYRST
Trigger: GGTGCTGCGGTACCTGGGCCAGCTGGACGACAGTGA...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATCGACACCCAGGGTCTaGGTACAGAAGCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARSTPRV*VQKRCL
Trigger: GAGGCACCGCTTCTGTACCCAGACCCTGGGTGTCGA...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCGACACCCAGGGTCTaGGTACAGAAGCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDSTPRV*VQKRCL
Trigger: GAGGCACCGCTTCTGTACCCAGACCCTGGGTGTCGA...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGCGGCAGAAGCAGTGGTaGCCACTGGGGGTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRRQKQW*PLGVKQ
Trigger: CTGCTTCACCCCCAGTGGCCACCACTGCTTCTGCCG...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGCGGCAGAAGCAGTGGTaGCCACTGGGGGTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GIINHWAQGHMQHFQERGRQKQW*PLGVKQ
Trigger: CTGCTTCACCCCCAGTGGCCACCACTGCTTCTGCCG...CCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCAGTGCGGCAGAAGCAGTaGTGGCCACTGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAVRQKQ*WPLGVK
Trigger: CTTCACCCCCAGTGGCCACCACTGCTTCTGCCGCAC...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGTGCGGCAGAAGCAGTaGTGGCCACTGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTVRQKQ*WPLGVK
Trigger: CTTCACCCCCAGTGGCCACCACTGCTTCTGCCGCAC...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTTGGGACTCTGCCAGATaGGCTGAGGCTGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: TRALSGLDFLWAQLESRLWDSAR*AEAAVP
Trigger: TGGAACTGCAGCCTCAGCCCATCTGGCAGAGTCCCA...AAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGATCCTGTGGGCGCAGCTaGAGTCAAGGCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: QHTALADKAAVPVSEFLGSCGRS*SQGLGS
Trigger: AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGA...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGAGGACTGGACTTCCTGTaGGCGCAGCTGGAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: QHTALADKAAVPVSEFLGGLDFL*AQLESR
Trigger: CCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCC...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCGGGCACTGTCGGGACTaGACTTCCTGTGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VSDMTTHGTGRQSSCASLGHCRD*TSCGRS
Trigger: GCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC...GAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCCCATTGCCATGGATCTaGCTCAAAGGCAACAAGGGC +
Preference number: 4 (lower is better)
Translates to: GPMGRQVVVVSSTTGHRGPLPWI*LKGNKG
Trigger: GCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGG...GCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGCCACTCCCTAGTGACAGCCCTAACAGCATGTGCACTGTCTAAATCACATCCCCAGGAGAGAGGGGCCTaGAGGGGTCCTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GHSLVTALTACALSKSHPQERGA*RGPQPW
Trigger: CCAGGGCTGAGGACCCCTCCAGGCCCCTCTCTCCTG...GGGATGTGATTTAGACAGTGCACATGCTGTTAGGGCTGTCACTAGGGAGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGGTAGGCAGGTGGTGGTaGTATCATCAACCACTGGGC +
Preference number: 4 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWVGRWW*YHQPLG
Trigger: GCCCAGTGGTTGATGATACCACCACCACCTGCCTAC...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGTAGGCAGGTGGTGGTaGTATCATCAACCACTGGGC +
Preference number: 4 (lower is better)
Translates to: KGTVGTGLPVGAAGVKAWVGRWW*YHQPLG
Trigger: GCCCAGTGGTTGATGATACCACCACCACCTGCCTAC...CCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTTGTGTCTATGCTGGGTaGCAGGGGTCAGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: TRALSGLDFLWAQLESRLCVYAG*QGSDAL
Trigger: CAGGGCATCTGACCCCTGCCACCCAGCATAGACACA...AAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GCAGCCAACCTTAAAGGACTAGGGGCTCCCCACACTCAAGAGGGCAGACCCTGCGAGGTGTGTCTATGCTaGGTGGCAGGGGTCAGATGC +
Preference number: 4 (lower is better)
Translates to: AANLKGLGAPHTQEGRPCEVCLC*VAGVRC
Trigger: GCATCTGACCCCTGCCACCCAGCATAGACACACCTC...GCAGGGTCTGCCCTCTTGAGTGTGGGGAGCCCCTAGTCCTTTAAGGTTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATCACGAGGCCTACCAGTaGGATCTAGGCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: TGRQSSCASLRVPGTLPDHEAYQ*DLGPRA
Trigger: GGCTCTCGGGCCTAGATCCCACTGGTAGGCCTCGTG...ATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGTCAGGATTTTGGCTaGTGTCAGGAGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSCQDFG*CQEASW
Trigger: CCAGGAGGCCTCCTGACACCAGCCAAAATCCTGACA...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCAGCAGACTCCCAAGACTaGGCCAGCTGCCTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAADSQD*ASCLVS
Trigger: GCTGACGAGGCAGCTGGCCCAGTCTTGGGAGTCTGC...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAGAGAAGCAATTTGGCTaGGTGGTCTCACTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GPQHVNRLGSCRCHVLWAEKQFG*VVSLPS
Trigger: GGAGGGCAGTGAGACCACCCAGCCAAATTGCTTCTC...TGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTCCCAACTGTCCCACATaGCTTCAGGTGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TRALSGLDFLWAQLESRLPNCPT*LQVLCW
Trigger: CCAGCACAGCACCTGAAGCCATGTGGGACAGTTGGG...AAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCGGTAGAGCTGCTGGATaGCGGGCACAGGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVGRAAG*RAQAVA
Trigger: TGCAACTGCCTGTGCCCGTCATCCAGCAGCTCTACC...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGGGTAGAGCTGCTGGATaGCGGGCACAGGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRGRAAG*RAQAVA
Trigger: TGCAACTGCCTGTGCCCGTCATCCAGCAGCTCTACC...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTAGCCACGCAGCACGATaGAGTGGCCCTGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASSHAAR*SGPGSQ
Trigger: CTGACTACCAGGGCCACTTCATCGTGCTGCGTGGCT...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCGGTGCTTGGGGTGAGTaGCATGACAACACACGGCAC +
Preference number: 4 (lower is better)
Translates to: GRQVVVVSSTTGHRGICSGAWGE*HDNTRH
Trigger: GTGCCGTGTGTTGTCATGTCACTCACCCCAAGCACC...GCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGAGGTGCTTGGGGTGAGTaGCATGACAACACACGGCAC +
Preference number: 4 (lower is better)
Translates to: QHTALADKAAVPVSEFLGGAWGE*HDNTRH
Trigger: GTGCCGTGTGTTGTCATGTCACTCACCCCAAGCACC...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGAATGGCAGGGCAGCTGTaGGGTGTGTCTATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: QHTALADKAAVPVSEFLGMAGQL*GVSMLG
Trigger: ACCCAGCATAGACACACCTCACAGCTGCCCTGCCAT...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCATGGCAGGGCAGCTGTaGGGTGTGTCTATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: IINHWAQGHMQHFQERGAMAGQL*GVSMLG
Trigger: ACCCAGCATAGACACACCTCACAGCTGCCCTGCCAT...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TCAGTCCTGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACGTCAGCTGCCTCGTCTaGGAGGTGAAGGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: SVLRSVGRPLPWIWLKGNVSCLV*EVKGQV
Trigger: TACCTGCCCCTTCACCTCTCAGACGAGGCAGCTGAC...GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTTAAGGCAATGGAGATaGGACCAGTCTAGAGCCAAC +
Preference number: 4 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGLRQWR*DQSRAN
Trigger: GTTGGCTCTAGACTGGTCTCATCTCCATTGCCTTAA...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGGCAGCTGTTTATTCCCAGAGCACTGCTGCCAGCCACGAGGCCTACCAGTGGGACATTTTGGCTGGACTaGGGTGCTGTTACCACCCTC +
Preference number: 4 (lower is better)
Translates to: GQLFIPRALLPATRPTSGTFWLD*GAVTTL
Trigger: GAGGGTGGTAACAGCACCTCAGTCCAGCCAAAATGT...CCCACTGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAATAAACAGCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGACTTGTGGCATGCCCTaGGAAGCCATCCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMTCGMP*EAILWD
Trigger: GTCCCAGAGGATGGCTTCTCAGGGCATGCCACAAGT...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGAGTGGGCAAAAGTCCCTaGTGTCCAGGCTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARVGKSP*CPGSLA
Trigger: AGCCAGAGAGCCTGGACATCAGGGACTTTTGCCCAC...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp ACAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTTCCCCGTGGCTAGAATaGACAAAGCCCAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: TRALSGLDFLWAQLESRLSPWLE*TKPNCP
Trigger: GGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGA...AAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCTCCCCGTGGCTAGAATaGACAAAGCCCAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCSPWLE*TKPNCP
Trigger: GGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGA...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGTCAGCTGCAGCTTCTaGAGGGCTCTCTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: QGHCRDWTSCGRSWSQGLVSCSF*RALSNS
Trigger: TGAGTTTGAGAGAGCCCTGCAGAAGCTGCAGCTGAC...CAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGGTCAGCTGCAGCTTCTaGAGGGCTCTCTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWVSCSF*RALSNS
Trigger: TGAGTTTGAGAGAGCCCTGCAGAAGCTGCAGCTGAC...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGAATGCTCCTGGTCAGCTaGAGCTTCTGCAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARMLLVS*SFCRAL
Trigger: GAGAGCCCTGCAGAAGCTGCAGCTGACCAGGAGCAT...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCGGTCGATGGTCCAGATaGTCCTGGTCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALGRWSR*SWSAAA
Trigger: AGCTGCAGCTGACCAGGAGCATCTGGACCATCGACC...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGTGGGTACAGAAGCGGTaGCTCACGCCAAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMWVQKR*LTPKWC
Trigger: GCACCACTTTGGCGTGAGGCACCGCTTCTGTACCCA...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCTGGTAGTCAGGAGTaGGGCAGAAGCAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GRWWWYHQPLGTGAYAALPGSQE*GRSSGG
Trigger: GCCACCACTGCTTCTGCCGCACTCCTGACTACCAGG...AAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTGGATGTCCTCATCTGTaGCATAGCTGGTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSGCPHL*HSWFWP
Trigger: AGGCCAGAACCAGCTATGGCACAGATGAGGACATCC...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTCTGTGGGGAGACCATTaGCATGGATCTGGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSLWGDH*HGSGSK
Trigger: CTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAG...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGCTGTGGGGAGACCATTaGCATGGATCTGGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWLWGDH*HGSGSK
Trigger: CTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAG...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACACTCCAGGCTCAGTCCTaGGGTCTGTGGGGAGACCAT +
Preference number: 4 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTLQAQS*GLWGDH
Trigger: ATGGTCTCCCCACAGACCGCAGGACTGAGCCTGGAG...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGAGGGCACAGGGGCATATaGAGCACTTCCAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QHTALADKAAVPVSEFLGGHRGI*STSRRE
Trigger: CTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCC...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGCTGCCCCAGCCCGTTaGTTTGGAGCACAGGCCTTA +
Preference number: 4 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTAAPAR*FGAQAL
Trigger: TAAGGCCTGTGCTCCAAAGCAACGGGCTGGGGCAGC...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGAGCAGGACCCAGGAGTaGAGGGATGGTATCACTGTT +
Preference number: 4 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWSRTQE*RDGITV
Trigger: AACAGTGATACCATCCCTGCACTCCTGGGTCCTGCT...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACGCACAGCTGCCACCATaGCATGCCTTGGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDAQLPP*HALGIG
Trigger: TCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGC...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGACCCCAGAGTCATCTGTaGTCCAAAGCAATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARPQSHL*SKAMGG
Trigger: CCCGCCCATTGCTTTGGAGCACAGATGACTCTGGGG...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCGCTGGGTGGTCTCACTaGCCTCCTAAACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GRQVVVVSSTTGHRGICSAGWSH*PPKQSP
Trigger: TGGGCTCTGTTTAGGAGGGCAGTGAGACCACCCAGC...GCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCGCTGGGTGGTCTCACTaGCCTCCTAAACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: IINHWAQGHMQHFQERGAAGWSH*PPKQSP
Trigger: TGGGCTCTGTTTAGGAGGGCAGTGAGACCACCCAGC...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATACCCCACAGCTGCTGTaGATGGGTACTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TGRQSSCASLRVPGTLPDTPQLL*MGTPGP
Trigger: TGGCCCAGGAGTACCCATGCACAGCAGCTGTGGGGT...ATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACCCACACCCCACAGCTaGTGTGCATGGGTACTCCTG +
Preference number: 4 (lower is better)
Translates to: CGLWGDHCHGSGSKATRAPTPHS*CAWVLL
Trigger: CAGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGG...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGACCACATGGCTTCAGGTaGTGTGCTGGTCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARPHGFR*CAGPQH
Trigger: ATGCTGGGGACCAGCACAGCACCTGAAGCCATGTGG...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTACGGGCACAGGCAGTTaGACAAAGTCCCCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASTGTGS*TKSPGG
Trigger: ACCGCCAGGGGACTTTGTGCAACTGCCTGTGCCCGT...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp TGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGACCGCAGCACCATCCTaGAGCAGGCCAGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: WYHQPLGTGAYAALPGERTAAPS*SRPGHS
Trigger: ACTGTGGCCTGGCCTGCTCCAGGATGGTGCTGCGGT...CCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTTCACTGTCGTCCAGCTaGCCCAGGTACCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPSLSSS*PRYRST
Trigger: GGTGCTGCGGTACCTGGGCCAGCTGGACGACAGTGA...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGAGGTAGGCCAGGTCGATaGTCCAGATGCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARGRPGR*SRCSWS
Trigger: TGACCAGGAGCATCTGGACCATCGACCTGGCCTACC...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCGGTAGGCCAGGTCGATaGTCCAGATGCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: IINHWAQGHMQHFQERGAGRPGR*SRCSWS
Trigger: TGACCAGGAGCATCTGGACCATCGACCTGGCCTACC...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACGGTAGGCCAGGTCGATaGTCCAGATGCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDGRPGR*SRCSWS
Trigger: TGACCAGGAGCATCTGGACCATCGACCTGGCCTACC...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCTAGAAGATGCAGCCAGTaGCCCGGTTGTAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: SSTTGHRGICSTSRREGPRRCSQ*PGCSHA
Trigger: TGCGTGGCTACAACCGGGCCACTGGCTGCATCTTCT...AGGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGAAGAAGATGCAGCCAGTaGCCCGGTTGTAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARRRCSQ*PGCSHA
Trigger: TGCGTGGCTACAACCGGGCCACTGGCTGCATCTTCT...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCGACAACACACGGCACTaGCAGACAAAGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCDNTRH*QTKQLC
Trigger: GCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTC...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGCAAGGCTTGGGGTCTTaGGGTATGCTTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMQGLGS*GMLPAA
Trigger: GGCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTG...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACTCCTGTGGGCGCAGCTaGAGTCAAGGCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DHCHGSGSKATRALSGLDSCGRS*SQGLGS
Trigger: AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGA...GTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGTCCTGTGGGCGCAGCTaGAGTCAAGGCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GDHCHGSGSKATRALSGLSCGRS*SQGLGS
Trigger: AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGA...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTCCATTGCCATGGATCTaGCTCAAAGGCAACAAGGGC +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSPLPWI*LKGNKG
Trigger: GCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGG...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGCCATGGGTAGGCAGGTaGTGGTGGTATCATCAACCA +
Preference number: 4 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWPWVGR*WWYHQP
Trigger: TGGTTGATGATACCACCACCACCTGCCTACCCATGG...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGAAGAAACTTGGGCCCATaGGTAGGCAGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QHTALADKAAVPVSEFLGRNLGP*VGRWWW
Trigger: CCACCACCACCTGCCTACCCATGGGCCCAAGTTTCT...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACAGAAACTTGGGCCCATaGGTAGGCAGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDRNLGP*VGRWWW
Trigger: CCACCACCACCTGCCTACCCATGGGCCCAAGTTTCT...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGTGTGTCTATGCTGGGTaGCAGGGGTCAGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMCVYAG*QGSDAL
Trigger: CAGGGCATCTGACCCCTGCCACCCAGCATAGACACA...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGCAGAGCTGGAGGACCTaGAGGGCTGTGGGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: GDHCHGSGSKATRALSGLQSWRT*RAVGAL
Trigger: TAAAGCCCCCACAGCCCTCCAGGTCCTCCAGCTCTG...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGCCCAGCCCGTTGCTTTaGAGCACAGGCCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GDHCHGSGSKATRALSGLPSPLL*STGLSS
Trigger: GCTGCTAAGGCCTGTGCTCCAAAGCAACGGGCTGGG...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGACAGCACCTCCCTCTTaGCCAAAGGCTTTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: KGTVGTGLPVGAAGVKAWTAPPS*PKALSR
Trigger: CCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGT...CCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGCGGTGTCATGTGCTGTaGGCAAAAGTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: SNGRGHSCHHAMPWALEERCHVL*AKVPDV
Trigger: GACATCAGGGACTTTTGCCCACAGCACATGACACCG...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCCCCAACTGTCCCACATaGCTTCAGGTGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALPNCPT*LQVLCW
Trigger: CCAGCACAGCACCTGAAGCCATGTGGGACAGTTGGG...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGTGTGAGCACCCTCTCTaGCTCTTTGCCGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: GIINHWAQGHMQHFQERGCEHPL*LFAGPK
Trigger: CTTGGGGCCGGCAAAGAGCCAGAGAGGGTGCTCACA...CCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR TCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGTAGAGCTGCTGGATaGCGGGCACAGGCAGTTGCA +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPGRAAG*RAQAVA
Trigger: TGCAACTGCCTGTGCCCGTCATCCAGCAGCTCTACC...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCAGCCACGCAGCACGATaGAGTGGCCCTGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: VSDMTTHGTGRQSSCASLSHAAR*SGPGSQ
Trigger: CTGACTACCAGGGCCACTTCATCGTGCTGCGTGGCT...GAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGACTCACATACTGTCCTaGCAAGTGGCATCCGTCAAG +
Preference number: 4 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWTHILS*QVASVK
Trigger: CTTGACGGATGCCACTTGTCAGGACAGTATGTGAGT...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGCTCCACCACTGTCCTaGGCAGACTCCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: GGIINHWAQGHMQHFQERAPPLS*ADSQDW
Trigger: CCAGTCTTGGGAGTCTGCTCAGGACAGTGGTGGAGC...TCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCTACCAGAACACCACCTaGAGATGCCCACACCCCACA +
Preference number: 4 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALYQNTT*RCPHPT
Trigger: TGTGGGGTGTGGGCATCTTCAGGTGGTGTTCTGGTA...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCAACTTGTGGCATGCCCTaGGAAGCCATCCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAATCGMP*EAILWD
Trigger: GTCCCAGAGGATGGCTTCTCAGGGCATGCCACAAGT...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGCCCTCCCTAGGCAGATaGGTCTTGAGAATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GDHCHGSGSKATRALSGLPSLGR*VLRMGS
Trigger: GCTGCCCATTCTCAAGACTCATCTGCCTAGGGAGGG...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCAGTGGGCAAAAGTCCCTaGTGTCCAGGCTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CGLWGDHCHGSGSKATRAVGKSP*CPGSLA
Trigger: AGCCAGAGAGCCTGGACATCAGGGACTTTTGCCCAC...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCGTCAGCTGCAGCTTCTaGAGGGCTCTCTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCVSCSF*RALSNS
Trigger: TGAGTTTGAGAGAGCCCTGCAGAAGCTGCAGCTGAC...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCATGCTCCTGGTCAGCTaGAGCTTCTGCAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVMLLVS*SFCRAL
Trigger: GAGAGCCCTGCAGAAGCTGCAGCTGACCAGGAGCAT...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTGGTCGATGGTCCAGATaGTCCTGGTCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASGRWSR*SWSAAA
Trigger: AGCTGCAGCTGACCAGGAGCATCTGGACCATCGACC...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACGGTCGATGGTCCAGATaGTCCTGGTCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DHCHGSGSKATRALSGLDGRWSR*SWSAAA
Trigger: AGCTGCAGCTGACCAGGAGCATCTGGACCATCGACC...GTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCGCAGGCCTTTGCTTGTaGAAACAGCTGATTCACCCG +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCAGLCL*KQLIHP
Trigger: CGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGC...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ACAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTTCTCCACCAGCACCTTaGAGGCCTTTGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: TRALSGLDFLWAQLESRLSPPAP*RPLLVQ
Trigger: TTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGA...AAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGACCTGGTAGTCAGGAGTaGGGCAGAAGCAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGIINHWAQGHMQHFQERPGSQE*GRSSGG
Trigger: GCCACCACTGCTTCTGCCGCACTCCTGACTACCAGG...TCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCTGTGGGGAGACCATTaGCATGGATCTGGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCLWGDH*HGSGSK
Trigger: CTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAG...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTGGGCACAGGGGCATATaGAGCACTTCCAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GRWWWYHQPLGTGAYAALGHRGI*STSRRE
Trigger: CTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCC...AAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TCAGTCCTGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACGGGCACAGGGGCATATaGAGCACTTCCAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SVLRSVGRPLPWIWLKGNGHRGI*STSRRE
Trigger: CTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCC...GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGGTGGCAGGGGTCAGATaGCCTGTAATGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMVAGVR*PVMSHR
Trigger: TCTGTGGCTCATTACAGGGCATCTGACCCCTGCCAC...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCGTGGCAGGGGTCAGATaGCCTGTAATGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: IINHWAQGHMQHFQERGAVAGVR*PVMSHR
Trigger: TCTGTGGCTCATTACAGGGCATCTGACCCCTGCCAC...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGTGGCAGGGGTCAGATaGCCTGTAATGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: TRHWQTKQLCQSPSSWDSVAGVR*PVMSHR
Trigger: TCTGTGGCTCATTACAGGGCATCTGACCCCTGCCAC...AGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACGTGGCAGGGGTCAGATaGCCTGTAATGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDVAGVR*PVMSHR
Trigger: TCTGTGGCTCATTACAGGGCATCTGACCCCTGCCAC...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTTTCCCAGAGCACTGCTaGCAGCCACGAGGCCTACCA +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPFPEHC*QPRGLP
Trigger: TGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAA...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCTTATTCCCAGAGCACTaGTGCCAGCCACGAGGCCTA +
Preference number: 4 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALLFPEH*CQPRGL
Trigger: TAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAATAA...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGCCCCAGAGTCATCTGTaGTCCAAAGCAATGGGCGGG +
Preference number: 4 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRPQSHL*SKAMGG
Trigger: CCCGCCCATTGCTTTGGAGCACAGATGACTCTGGGG...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACGCTGGGTGGTCTCACTaGCCTCCTAAACAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: DHCHGSGSKATRALSGLDAGWSH*PPKQSP
Trigger: TGGGCTCTGTTTAGGAGGGCAGTGAGACCACCCAGC...GTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACGAAACCCAGAAGGGCTaGCCAACTAACAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDETQKG*PTNSTS
Trigger: GGAGGTGCTGTTAGTTGGGCAGCCCTTCTGGGTTTC...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCGCTGTCGGTGTCATGTaGTGTGGGCAAAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: IINHWAQGHMQHFQERGAAVGVM*CGQKSL
Trigger: CAGGGACTTTTGCCCACAGCACATGACACCGACAGC...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCTGGCTTCAGGTGCTGTaGTGGTCCCCAGCATGTGAA +
Preference number: 4 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALWLQVL*WSPACE
Trigger: TTCACATGCTGGGGACCAGCACAGCACCTGAAGCCA...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGATGGCTTCAGGTGCTGTaGTGGTCCCCAGCATGTGAA +
Preference number: 4 (lower is better)
Translates to: QHTALADKAAVPVSEFLGWLQVL*WSPACE
Trigger: TTCACATGCTGGGGACCAGCACAGCACCTGAAGCCA...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCACATGGCTTCAGGTaGTGTGCTGGTCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVPHGFR*CAGPQH
Trigger: ATGCTGGGGACCAGCACAGCACCTGAAGCCATGTGG...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGAGAACTATCGTACTGGTaGCCTAGTTTCCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARELSYW*PSFPAG
Trigger: GCCGGCTGGGAAACTAGGGCACCAGTACGATAGTTC...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGGTAGGCCAGGTCGATaGTCCAGATGCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GIINHWAQGHMQHFQERGGRPGR*SRCSWS
Trigger: TGACCAGGAGCATCTGGACCATCGACCTGGCCTACC...CCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCTCGACACCCAGGGTCTaGGTACAGAAGCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: VSDMTTHGTGRQSSCASLSTPRV*VQKRCL
Trigger: GAGGCACCGCTTCTGTACCCAGACCCTGGGTGTCGA...GAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTTCGACACCCAGGGTCTaGGTACAGAAGCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPSTPRV*VQKRCL
Trigger: GAGGCACCGCTTCTGTACCCAGACCCTGGGTGTCGA...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGGTGCTGCACATTCCTaGGTCGGCATAGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GDHCHGSGSKATRALSGLGAAHS*VGIGWV
Trigger: AACCCAGCCTATGCCGACCCAGGAATGTGCAGCACC...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407471.7
ENST00000621833.4
CDS-3UTR CCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACGACAACACACGGCACTaGCAGACAAAGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDDNTRH*QTKQLC
Trigger: GCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTC...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGAGACAACACACGGCACTaGCAGACAAAGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QHTALADKAAVPVSEFLGDNTRH*QTKQLC
Trigger: GCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTC...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACCAAGGCTTGGGGTCTTaGGGTATGCTTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: DHCHGSGSKATRALSGLDQGLGS*GMLPAA
Trigger: GGCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTG...GTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGCAAGGCTTGGGGTCTTaGGGTATGCTTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GIINHWAQGHMQHFQERGQGLGS*GMLPAA
Trigger: GGCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTG...CCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCTGCTGGAGTCAAGGCTTaGGGTCTTGGGGTATGCTTC +
Preference number: 4 (lower is better)
Translates to: SSTTGHRGICSTSRREGPAGVKA*GLGVCF
Trigger: GAAGCATACCCCAAGACCCCAAGCCTTGACTCCAGC...AGGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGAGCTGGAGTCAAGGCTTaGGGTCTTGGGGTATGCTTC +
Preference number: 4 (lower is better)
Translates to: QHTALADKAAVPVSEFLGAGVKA*GLGVCF
Trigger: GAAGCATACCCCAAGACCCCAAGCCTTGACTCCAGC...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCGGGCACTGTCGGGACTaGACTTCCTGTGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLGHCRD*TSCGRS
Trigger: GCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTCCATTGCCATGGATCTaGCTCAAAGGCAACAAGGGC +
Preference number: 4 (lower is better)
Translates to: TRALSGLDFLWAQLESRLPLPWI*LKGNKG
Trigger: GCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGG...AAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCGGTATCATCAACCACTaGGCACAGGGGCATATGCAG +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCGIINH*AQGHMQ
Trigger: CTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTCCATGGGTAGGCAGGTaGTGGTGGTATCATCAACCA +
Preference number: 4 (lower is better)
Translates to: TRALSGLDFLWAQLESRLPWVGR*WWYHQP
Trigger: TGGTTGATGATACCACCACCACCTGCCTACCCATGG...AAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TCAGTCCTGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAGAAACTTGGGCCCATaGGTAGGCAGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SVLRSVGRPLPWIWLKGNRNLGP*VGRWWW
Trigger: CCACCACCACCTGCCTACCCATGGGCCCAAGTTTCT...GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGAGAAACTTGGGCCCATaGGTAGGCAGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GDHCHGSGSKATRALSGLRNLGP*VGRWWW
Trigger: CCACCACCACCTGCCTACCCATGGGCCCAAGTTTCT...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGAGGTGTGTCTATGCTaGGTGGCAGGGGTCAGATGC +
Preference number: 4 (lower is better)
Translates to: GDHCHGSGSKATRALSGLEVCLC*VAGVRC
Trigger: GCATCTGACCCCTGCCACCCAGCATAGACACACCTC...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGTTTTTAGGTGCAGACTaGGGTTCAAGACCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QGHCRDWTSCGRSWSQGLFLGAD*GSRPSS
Trigger: GGAGCTGGGTCTTGAACCCCAGTCTGCACCTAAAAA...CAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTACCCATTTCCCACTTTaGGAGGCCGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASTHFPL*EAEAGG
Trigger: TCCACCTGCCTCGGCCTCCCAAAGTGGGAAATGGGT...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTAGCAATTTGGCTGGGTaGTCTCACTGCCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSSNLAG*SHCPPK
Trigger: TTTAGGAGGGCAGTGAGACCACCCAGCCAAATTGCT...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCGATGTCCAGGCTCTCTaGCTCCATTTTCATGACTTG +
Preference number: 4 (lower is better)
Translates to: GPMGRQVVVVSSTTGHRGDVQAL*LHFHDL
Trigger: CAAGTCATGAAAATGGAGCCAGAGAGCCTGGACATC...GCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACAGCCTGTCCTTGGTGTaGGGTGCTTGGAAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDSLSLV*GAWKCE
Trigger: CTCACACTTCCAAGCACCCCACACCAAGGACAGGCT...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTTGTGACGGGAAGTCCTaGCCCTTGGCCCAACCTCCT +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPCDGKS*PLAQPP
Trigger: AGGAGGTTGGGCCAAGGGCCAGGACTTCCCGTCACA...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACCCGGAACTATCGTACTaGTGCCCTAGTTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDPELSY*CPSFPA
Trigger: GGCTGGGAAACTAGGGCACCAGTACGATAGTTCCGG...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp TGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCCCGGAACTATCGTACTaGTGCCCTAGTTTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: WAAVGVMCCGQKSLMSRLPELSY*CPSFPA
Trigger: GGCTGGGAAACTAGGGCACCAGTACGATAGTTCCGG...GAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621833.4
3UTR CAA 72 bp TCTCCAGGCTCAGTCCTGCGGTCTGTGGGGAGACCATaGCCATGGATCTGGCTCAAAGGCAACAAGGGCACT +
Preference number: 4 (lower is better)
Translates to: SPGSVLRSVGRP*PWIWLKGNKGT
Trigger: AGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGACTGAGCCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGCCACTCCCTAGTGACAGCCCTAACAGCATGTGCACTGTCTAAATCACATCCCAGCCACGCAGCACGATaGAGTGGCCCTGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: GHSLVTALTACALSKSHPSHAAR*SGPGSQ
Trigger: CTGACTACCAGGGCCACTTCATCGTGCTGCGTGGCT...GGGATGTGATTTAGACAGTGCACATGCTGTTAGGGCTGTCACTAGGGAGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGTGCTTGGGGTGAGTaGCATGACAACACACGGCAC +
Preference number: 4 (lower is better)
Translates to: WYHQPLGTGAYAALPGERGAWGE*HDNTRH
Trigger: GTGCCGTGTGTTGTCATGTCACTCACCCCAAGCACC...CCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCCGAGAGCCCTCCATCTaGCAGAGCTGGAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLREPSI*QSWRTW
Trigger: CCAGGTCCTCCAGCTCTGTCAGATGGAGGGCTCTCG...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTCTGTGCAATCTGGTGTaGAGACCAGGTTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPLCNLV*RPGWVG
Trigger: GCCCACCCAACCTGGTCTTCACACCAGATTGCACAG...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGACTGTGCAATCTGGTGTaGAGACCAGGTTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GGIINHWAQGHMQHFQERLCNLV*RPGWVG
Trigger: GCCCACCCAACCTGGTCTTCACACCAGATTGCACAG...TCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCTACCAGAACACCACCTaGAGATGCCCACACCCCACA +
Preference number: 4 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVYQNTT*RCPHPT
Trigger: TGTGGGGTGTGGGCATCTTCAGGTGGTGTTCTGGTA...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp ACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATTGTTACCACCCTCCATaGAGGCCACTCCCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: TGRQSSCASLRVPGTLPDCYHPP*RPLPSD
Trigger: GTCACTAGGGAGTGGCCTTCATGGAGGGTGGTAACA...ATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGTGTTACCACCCTCCATaGAGGCCACTCCCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: GIINHWAQGHMQHFQERGCYHPP*RPLPSD
Trigger: GTCACTAGGGAGTGGCCTTCATGGAGGGTGGTAACA...CCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCTACATTTTGGCTGGACTaGGGTGCTGTTACCACCCTC +
Preference number: 4 (lower is better)
Translates to: SSTTGHRGICSTSRREGPTFWLD*GAVTTL
Trigger: GAGGGTGGTAACAGCACCTCAGTCCAGCCAAAATGT...AGGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCCTGGTCCCCAGCATGTaGACAGGCTGGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLLVPSM*TGWAAV
Trigger: GACAGCTGCCCAGCCTGTTCACATGCTGGGGACCAG...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACTCCCCGTGGCTAGAATaGACAAAGCCCAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: DHCHGSGSKATRALSGLDSPWLE*TKPNCP
Trigger: GGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGA...GTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTCAACAAATGAAATTGTaGCGGGAAGTCCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSQQMKL*REVLAL
Trigger: AAGGGCCAGGACTTCCCGTCACAATTTCATTTGTTG...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR GCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACGTCAGCTGCAGCTTCTaGAGGGCTCTCTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDVSCSF*RALSNS
Trigger: TGAGTTTGAGAGAGCCCTGCAGAAGCTGCAGCTGAC...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCATGCTCCTGGTCAGCTaGAGCTTCTGCAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: VSDMTTHGTGRQSSCASLMLLVS*SFCRAL
Trigger: GAGAGCCCTGCAGAAGCTGCAGCTGACCAGGAGCAT...GAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGTGGGTACAGAAGCGGTaGCTCACGCCAAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: WYHQPLGTGAYAALPGERWVQKR*LTPKWC
Trigger: GCACCACTTTGGCGTGAGGCACCGCTTCTGTACCCA...CCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGGCAGGCCTTTGCTTGTaGAAACAGCTGATTCACCCG +
Preference number: 4 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMAGLCL*KQLIHP
Trigger: CGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGC...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGCACCTTGCAGGCCTTTaGTTGTGCAAACAGCTGATT +
Preference number: 4 (lower is better)
Translates to: QGHCRDWTSCGRSWSQGLHLAGL*LCKQLI
Trigger: AATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTG...CAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCTCTCCACCAGCACCTTaGAGGCCTTTGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALSPPAP*RPLLVQ
Trigger: TTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGA...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTCCACCAGCACCTTaGAGGCCTTTGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDSPPAP*RPLLVQ
Trigger: TTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGA...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGAGGATGTCCTCATCTGTaGCATAGCTGGTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QHTALADKAAVPVSEFLGGCPHL*HSWFWP
Trigger: AGGCCAGAACCAGCTATGGCACAGATGAGGACATCC...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTTGTGAGGTGTGTCTATaGTGGGTGGCAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: GRWWWYHQPLGTGAYAALCEVCL*WVAGVR
Trigger: TCTGACCCCTGCCACCCAGCATAGACACACCTCACA...AAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TCAGTCCTGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACTGTGAGGTGTGTCTATaGTGGGTGGCAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SVLRSVGRPLPWIWLKGNCEVCL*WVAGVR
Trigger: TCTGACCCCTGCCACCCAGCATAGACACACCTCACA...GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCGGGCGGGGGCACAGCTaGCACCATGCCATGCCTTGG +
Preference number: 4 (lower is better)
Translates to: QALWLHFHDLCKNATQCVGRGHS*HHAMPW
Trigger: CCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCC...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTGAAACCCAGAAGGGCTaGCCAACTAACAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASETQKG*PTNSTS
Trigger: GGAGGTGCTGTTAGTTGGGCAGCCCTTCTGGGTTTC...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCCACTCCCTAGTGACAGCCCTAACAGCATGTGCACTGTCTAAATCACATCCCCCCACACCCCACAGCTaGTGTGCATGGGTACTCCTG +
Preference number: 4 (lower is better)
Translates to: GHSLVTALTACALSKSHPPTPHS*CAWVLL
Trigger: CAGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGG...GGGATGTGATTTAGACAGTGCACATGCTGTTAGGGCTGTCACTAGGGAGTGGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCAGCTGTCGGTGTCATGTaGTGTGGGCAAAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAAVGVM*CGQKSL
Trigger: CAGGGACTTTTGCCCACAGCACATGACACCGACAGC...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGGCTGTCGGTGTCATGTaGTGTGGGCAAAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRAVGVM*CGQKSL
Trigger: CAGGGACTTTTGCCCACAGCACATGACACCGACAGC...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACTGGCTTCAGGTGCTGTaGTGGTCCCCAGCATGTGAA +
Preference number: 4 (lower is better)
Translates to: DHCHGSGSKATRALSGLDWLQVL*WSPACE
Trigger: TTCACATGCTGGGGACCAGCACAGCACCTGAAGCCA...GTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCTGGGACTCTGCCAGATaGGCTGAGGCTGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: VSDMTTHGTGRQSSCASLWDSAR*AEAAVP
Trigger: TGGAACTGCAGCCTCAGCCCATCTGGCAGAGTCCCA...GAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTTGGGACTCTGCCAGATaGGCTGAGGCTGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPWDSAR*AEAAVP
Trigger: TGGAACTGCAGCCTCAGCCCATCTGGCAGAGTCCCA...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTGACAACACACGGCACTaGCAGACAAAGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASDNTRH*QTKQLC
Trigger: GCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTC...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCAGACAACACACGGCACTaGCAGACAAAGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CGLWGDHCHGSGSKATRADNTRH*QTKQLC
Trigger: GCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTC...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGCAAGGCTTGGGGTCTTaGGGTATGCTTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: WYHQPLGTGAYAALPGERQGLGS*GMLPAA
Trigger: GGCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTG...CCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTCAAGGCTTGGGGTCTTaGGGTATGCTTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPQGLGS*GMLPAA
Trigger: GGCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTG...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCTGGAGTCAAGGCTTaGGGTCTTGGGGTATGCTTC +
Preference number: 4 (lower is better)
Translates to: GIINHWAQGHMQHFQERGAGVKA*GLGVCF
Trigger: GAAGCATACCCCAAGACCCCAAGCCTTGACTCCAGC...CCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCGCTGGAGTCAAGGCTTaGGGTCTTGGGGTATGCTTC +
Preference number: 4 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVAGVKA*GLGVCF
Trigger: GAAGCATACCCCAAGACCCCAAGCCTTGACTCCAGC...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCAGCTGGAGTCAAGGCTTaGGGTCTTGGGGTATGCTTC +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAAGVKA*GLGVCF
Trigger: GAAGCATACCCCAAGACCCCAAGCCTTGACTCCAGC...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACGGGAGACCATTGCCATaGATCTGGCTCAAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDGRPLP*IWLKGN
Trigger: GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCC...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGTACTGTCCTGACAAGTaGCATCCGTCAAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: KGTVGTGLPVGAAGVKAWYCPDK*HPSSNF
Trigger: GAAGTTGCTTGACGGATGCCACTTGTCAGGACAGTA...CCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCTGGTATCATCAACCACTaGGCACAGGGGCATATGCAG +
Preference number: 4 (lower is better)
Translates to: SSTTGHRGICSTSRREGPGIINH*AQGHMQ
Trigger: CTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC...AGGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCAGTAGGCAGGTGGTGGTaGTATCATCAACCACTGGGC +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAVGRWW*YHQPLG
Trigger: GCCCAGTGGTTGATGATACCACCACCACCTGCCTAC...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTTGGGTAGGCAGGTGGTaGTGGTATCATCAACCACTG +
Preference number: 4 (lower is better)
Translates to: TRHWQTKQLCQSPSSWDSWVGRW*WYHQPL
Trigger: CAGTGGTTGATGATACCACCACCACCTGCCTACCCA...AGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCTGTGTCTATGCTGGGTaGCAGGGGTCAGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: VSDMTTHGTGRQSSCASLCVYAG*QGSDAL
Trigger: CAGGGCATCTGACCCCTGCCACCCAGCATAGACACA...GAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTTGTGTCTATGCTGGGTaGCAGGGGTCAGATGCCCTG +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPCVYAG*QGSDAL
Trigger: CAGGGCATCTGACCCCTGCCACCCAGCATAGACACA...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGAGGTGTGTCTATGCTaGGTGGCAGGGGTCAGATGC +
Preference number: 4 (lower is better)
Translates to: WYHQPLGTGAYAALPGEREVCLC*VAGVRC
Trigger: GCATCTGACCCCTGCCACCCAGCATAGACACACCTC...CCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATTGTCAGGATTTTGGCTaGTGTCAGGAGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TGRQSSCASLRVPGTLPDCQDFG*CQEASW
Trigger: CCAGGAGGCCTCCTGACACCAGCCAAAATCCTGACA...ATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCACCCATTTCCCACTTTaGGAGGCCGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VSDMTTHGTGRQSSCASLTHFPL*EAEAGG
Trigger: TCCACCTGCCTCGGCCTCCCAAAGTGGGAAATGGGT...GAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCTCCAGGAGTGCAGGGATaGTATCACTGTTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: SSTTGHRGICSTSRREGPPGVQG*YHCCPF
Trigger: AAAGGGGCAACAGTGATACCATCCCTGCACTCCTGG...AGGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCCCAGGAGTGCAGGGATaGTATCACTGTTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: GRQVVVVSSTTGHRGICSPGVQG*YHCCPF
Trigger: AAAGGGGCAACAGTGATACCATCCCTGCACTCCTGG...GCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACGAGAAGCAATTTGGCTaGGTGGTCTCACTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: DHCHGSGSKATRALSGLDEKQFG*VVSLPS
Trigger: GGAGGGCAGTGAGACCACCCAGCCAAATTGCTTCTC...GTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TCAGTCCTGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACGAGAAGCAATTTGGCTaGGTGGTCTCACTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SVLRSVGRPLPWIWLKGNEKQFG*VVSLPS
Trigger: GGAGGGCAGTGAGACCACCCAGCCAAATTGCTTCTC...GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCAGGTGCTGTGCTaGTCCCCAGCATGTGAACAG +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAALQVLC*SPACEQ
Trigger: CTGTTCACATGCTGGGGACCAGCACAGCACCTGAAG...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCTCGGTCGGCATAGGCTaGGTTGTTGTAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCSVGIG*VVVEDA
Trigger: TGCATCTTCTACAACAACCCAGCCTATGCCGACCGA...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000435822.6
CDS-3UTR CCA 90 bp ACAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTTCGGTCGGCATAGGCTaGGTTGTTGTAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: TRALSGLDFLWAQLESRLSVGIG*VVVEDA
Trigger: TGCATCTTCTACAACAACCCAGCCTATGCCGACCGA...AAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000435822.6
CDS-3UTR CCA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCATTGGTGTGGGGTGCTTaGAAGTGTGAGCACCCTCTC +
Preference number: 4 (lower is better)
Translates to: CGLWGDHCHGSGSKATRALVWGA*KCEHPL
Trigger: GAGAGGGTGCTCACACTTCCAAGCACCCCACACCAA...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCAGCCTGTCCTTGGTGTaGGGTGCTTGGAAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVSLSLV*GAWKCE
Trigger: CTCACACTTCCAAGCACCCCACACCAAGGACAGGCT...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621833.4
CDS-3UTR CCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCTTGCACAAAGTCCCCTaGCGGTGCCGGGATCAACAA +
Preference number: 4 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVLHKVP*RCRDQQ
Trigger: TTGTTGATCCCGGCACCGCCAGGGGACTTTGTGCAA...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621833.4
3UTR CAA 72 bp GCAGGGGTCAGATGCCCTGTAATGAGCCACAGAAACTaGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCAT +
Preference number: 4 (lower is better)
Translates to: AGVRCPVMSHRN*GPWVGRWWWYH
Trigger: ATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTTTCTGTGGCTCATTACAGGGCATCTGACCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGACTCACATACTGTCCTaGCAAGTGGCATCCGTCAAG +
Preference number: 4 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMTHILS*QVASVK
Trigger: CTTGACGGATGCCACTTGTCAGGACAGTATGTGAGT...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGAACTCACATACTGTCCTaGCAAGTGGCATCCGTCAAG +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARTHILS*QVASVK
Trigger: CTTGACGGATGCCACTTGTCAGGACAGTATGTGAGT...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTGCTCCACCACTGTCCTaGGCAGACTCCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: IPFIPVARMNKAQLSHMAAPPLS*ADSQDW
Trigger: CCAGTCTTGGGAGTCTGCTCAGGACAGTGGTGGAGC...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCACATTTTGGCTGGACTaGGGTGCTGTTACCACCCTC +
Preference number: 4 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVTFWLD*GAVTTL
Trigger: GAGGGTGGTAACAGCACCTCAGTCCAGCCAAAATGT...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGCTGGCTCCATTTTCATaGCTTGTGCAAGAATGCAAC +
Preference number: 4 (lower is better)
Translates to: SNGRGHSCHHAMPWALEELAPFS*LVQECN
Trigger: GTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAG...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGCGGGAGGGCGGTCGGTaGGTGTCGAGTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLREGGR*VSSSFS
Trigger: GGAGAAGGAACTCGACACGCACCGACCGCCCTCCCG...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
CDS-3UTR GCA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGGTCAGCTGCAGCTTCTaGAGGGCTCTCTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRVSCSF*RALSNS
Trigger: TGAGTTTGAGAGAGCCCTGCAGAAGCTGCAGCTGAC...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCCACTCCCTAGTGACAGCCCTAACAGCATGTGCACTGTCTAAATCACATCCCGGTCGATGGTCCAGATaGTCCTGGTCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GHSLVTALTACALSKSHPGRWSR*SWSAAA
Trigger: AGCTGCAGCTGACCAGGAGCATCTGGACCATCGACC...GGGATGTGATTTAGACAGTGCACATGCTGTTAGGGCTGTCACTAGGGAGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCCACTCCCTAGTGACAGCCCTAACAGCATGTGCACTGTCTAAATCACATCCCTGGGTACAGAAGCGGTaGCTCACGCCAAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: GHSLVTALTACALSKSHPWVQKR*LTPKWC
Trigger: GCACCACTTTGGCGTGAGGCACCGCTTCTGTACCCA...GGGATGTGATTTAGACAGTGCACATGCTGTTAGGGCTGTCACTAGGGAGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCAGCAGGCCTTTGCTTGTaGAAACAGCTGATTCACCCG +
Preference number: 4 (lower is better)
Translates to: CGLWGDHCHGSGSKATRAAGLCL*KQLIHP
Trigger: CGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGC...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTGCAGGCCTTTGCTTGTaGAAACAGCTGATTCACCCG +
Preference number: 4 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASAGLCL*KQLIHP
Trigger: CGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGC...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCCCTGGTAGTCAGGAGTaGGGCAGAAGCAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLPGSQE*GRSSGG
Trigger: GCCACCACTGCTTCTGCCGCACTCCTGACTACCAGG...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTCCTGGTAGTCAGGAGTaGGGCAGAAGCAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FIPVARMNKAQLSHMASGPGSQE*GRSSGG
Trigger: GCCACCACTGCTTCTGCCGCACTCCTGACTACCAGG...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCGGATGTCCTCATCTGTaGCATAGCTGGTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVGCPHL*HSWFWP
Trigger: AGGCCAGAACCAGCTATGGCACAGATGAGGACATCC...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTCAAGAGGGCAGACCCTaGTGTCAGGATTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPQEGRP*CQDFGW
Trigger: CCAGCCAAAATCCTGACAGCAGGGTCTGCCCTCTTG...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTGAGCTCTATGCTACTTaGTGTGTTGTAAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSELYAT*CVVRSW
Trigger: CCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCATGGCTAACTGCCCTGTaGAGAGGTGTTAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAWLTAL*RGVSGS
Trigger: GGAACCACTAACACCTCTGCACAGGGCAGTTAGCCA...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCATGGCTAACTGCCCTGTaGAGAGGTGTTAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: CGLWGDHCHGSGSKATRAWLTAL*RGVSGS
Trigger: GGAACCACTAACACCTCTGCACAGGGCAGTTAGCCA...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCAAGCAGGACCCAGGAGTaGAGGGATGGTATCACTGTT +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAASRTQE*RDGITV
Trigger: AACAGTGATACCATCCCTGCACTCCTGGGTCCTGCT...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACAGCCCTCTTTTCCGGTaGCGGAACTATCGTACTGGT +
Preference number: 4 (lower is better)
Translates to: DHCHGSGSKATRALSGLDSPLFR*RNYRTG
Trigger: ACCAGTACGATAGTTCCGGCACCGGAAAAGAGGGCT...GTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR GCA 90 bp ACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGGTGCTGCACATTCCTaGATTTCTCCACCAGCACCT +
Preference number: 4 (lower is better)
Translates to: TGRQSSCASLRVPGTLPDGAAHS*ISPPAP
Trigger: AGGTGCTGGTGGAGAAATGCAGGAATGTGCAGCACC...ATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402766.5
CDS-3UTR CCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCTCGACACCCAGGGTCTaGGTACAGAAGCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLSTPRV*VQKRCL
Trigger: GAGGCACCGCTTCTGTACCCAGACCCTGGGTGTCGA...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGCCACTCCCTAGTGACAGCCCTAACAGCATGTGCACTGTCTAAATCACATCCCAGAAGATGCAGCCAGTaGCCCGGTTGTAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: GHSLVTALTACALSKSHPRRCSQ*PGCSHA
Trigger: TGCGTGGCTACAACCGGGCCACTGGCTGCATCTTCT...GGGATGTGATTTAGACAGTGCACATGCTGTTAGGGCTGTCACTAGGGAGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCTGGGTCGGCATAGGCTaGGTTGTTGTAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: IINHWAQGHMQHFQERGAWVGIG*VVVEDA
Trigger: TGCATCTTCTACAACAACCCAGCCTATGCCGACCCA...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407471.7
ENST00000621833.4
CDS-3UTR CCA 90 bp ACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTCATCTGTGCCATAGCTaGTTCTGGCCTCCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: TRHWQTKQLCQSPSSWDSHLCHS*FWPPQS
Trigger: ACTTTGAGGAGGCCAGAACCAGCTATGGCACAGATG...AGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGACATCTGTGCCATAGCTaGTTCTGGCCTCCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARHLCHS*FWPPQS
Trigger: ACTTTGAGGAGGCCAGAACCAGCTATGGCACAGATG...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTGGACTGGACTTCCTGTaGGCGCAGCTGGAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: IPFIPVARMNKAQLSHMAGLDFL*AQLESR
Trigger: CCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCC...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACCATTGCCATGGATCTaGCTCAAAGGCAACAAGGGC +
Preference number: 4 (lower is better)
Translates to: CGLWGDHCHGSGSKATRAPLPWI*LKGNKG
Trigger: GCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGG...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGGGTATCATCAACCACTaGGCACAGGGGCATATGCAG +
Preference number: 4 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRGIINH*AQGHMQ
Trigger: CTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGTGGGTAGGCAGGTGGTaGTGGTATCATCAACCACTG +
Preference number: 4 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRWVGRW*WYHQPL
Trigger: CAGTGGTTGATGATACCACCACCACCTGCCTACCCA...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCCATGGGTAGGCAGGTaGTGGTGGTATCATCAACCA +
Preference number: 4 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASPWVGR*WWYHQP
Trigger: TGGTTGATGATACCACCACCACCTGCCTACCCATGG...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATCCATGGGTAGGCAGGTaGTGGTGGTATCATCAACCA +
Preference number: 4 (lower is better)
Translates to: TGRQSSCASLRVPGTLPDPWVGR*WWYHQP
Trigger: TGGTTGATGATACCACCACCACCTGCCTACCCATGG...ATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCGTATCCTGTGCAATCTaGTGTGAAGACCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: IINHWAQGHMQHFQERGAVSCAI*CEDQVG
Trigger: CCCAACCTGGTCTTCACACCAGATTGCACAGGATAC...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGAAAAAGAACTTGAGCTaGCTAACTGCCCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: KGTVGTGLPVGAAGVKAWKKNLS*LTALCR
Trigger: TCTGCACAGGGCAGTTAGCCAGCTCAAGTTCTTTTT...CCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGTTTTTAGGTGCAGACTaGGGTTCAAGACCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMFLGAD*GSRPSS
Trigger: GGAGCTGGGTCTTGAACCCCAGTCTGCACCTAAAAA...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGACAGCACCTCCCTCTTaGCCAAAGGCTTTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: GDHCHGSGSKATRALSGLTAPPS*PKALSR
Trigger: CCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGT...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACGGTGTCATGTGCTGTaGGCAAAAGTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAARCHVL*AKVPDV
Trigger: GACATCAGGGACTTTTGCCCACAGCACATGACACCG...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGCTTCAGGTGCTGTGCTaGTCCCCAGCATGTGAACAG +
Preference number: 4 (lower is better)
Translates to: WYHQPLGTGAYAALPGERLQVLC*SPACEQ
Trigger: CTGTTCACATGCTGGGGACCAGCACAGCACCTGAAG...CCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTTTGCACAAAGTCCCCTaGCGGTGCCGGGATCAACAA +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPLHKVP*RCRDQQ
Trigger: TTGTTGATCCCGGCACCGCCAGGGGACTTTGTGCAA...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR TCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAACTCACATACTGTCCTaGCAAGTGGCATCCGTCAAG +
Preference number: 4 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTTHILS*QVASVK
Trigger: CTTGACGGATGCCACTTGTCAGGACAGTATGTGAGT...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCATGGCAGGGCAGCTGTaGGGTGTGTCTATGCTGGGT +
Preference number: 4 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLMAGQL*GVSMLG
Trigger: ACCCAGCATAGACACACCTCACAGCTGCCCTGCCAT...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGGGCAGGTGGATCACCTaGGCTCAGGGGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLGRWIT*AQGFET
Trigger: GGTCTCGAACCCCTGAGCTCAGGTGATCCACCTGCC...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCATCTGGGACCAGAGACTaGGTGTTTCTAAACATTTTG +
Preference number: 4 (lower is better)
Translates to: GPQHVNRLGSCRCHVLWASGTRD*VFLNIL
Trigger: CAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGA...TGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTACTTGTGGCATGCCCTaGGAAGCCATCCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: FIPVARMNKAQLSHMASGTCGMP*EAILWD
Trigger: GTCCCAGAGGATGGCTTCTCAGGGCATGCCACAAGT...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTCCCTCCCTAGGCAGATaGGTCTTGAGAATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FIPVARMNKAQLSHMASGPSLGR*VLRMGS
Trigger: GCTGCCCATTCTCAAGACTCATCTGCCTAGGGAGGG...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTCCCTCCCTAGGCAGATaGGTCTTGAGAATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: IPFIPVARMNKAQLSHMAPSLGR*VLRMGS
Trigger: GCTGCCCATTCTCAAGACTCATCTGCCTAGGGAGGG...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCGTCAGCTGCAGCTTCTaGAGGGCTCTCTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: VSDMTTHGTGRQSSCASLVSCSF*RALSNS
Trigger: TGAGTTTGAGAGAGCCCTGCAGAAGCTGCAGCTGAC...GAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGCACCTTGCAGGCCTTTaGTTGTGCAAACAGCTGATT +
Preference number: 4 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMHLAGL*LCKQLI
Trigger: AATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTG...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCCACCTTGCAGGCCTTTaGTTGTGCAAACAGCTGATT +
Preference number: 4 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALHLAGL*LCKQLI
Trigger: AATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTG...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACCACCTTGCAGGCCTTTaGTTGTGCAAACAGCTGATT +
Preference number: 4 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDHLAGL*LCKQLI
Trigger: AATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTG...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGATGTCCTCATCTGTaGCATAGCTGGTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPGCPHL*HSWFWP
Trigger: AGGCCAGAACCAGCTATGGCACAGATGAGGACATCC...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTGATTGGGGTCAGCTATaGTGTCTCCAGACACTCACA +
Preference number: 4 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASDWGQL*CLQTLT
Trigger: TGTGAGTGTCTGGAGACAGCATAGCTGACCCCAATC...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCGAGCTCTATGCTACTTaGTGTGTTGTAAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: TALADKAAVPVSEFLGLCELYAT*CVVRSW
Trigger: CCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTCCACATGGCTTCAGGTaGTGTGCTGGTCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: FIPVARMNKAQLSHMASGPHGFR*CAGPQH
Trigger: ATGCTGGGGACCAGCACAGCACCTGAAGCCATGTGG...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCAGCCCTCTTTTCCGGTaGCGGAACTATCGTACTGGT +
Preference number: 4 (lower is better)
Translates to: VSDMTTHGTGRQSSCASLSPLFR*RNYRTG
Trigger: ACCAGTACGATAGTTCCGGCACCGGAAAAGAGGGCT...GAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTACCGCAGCACCATCCTaGAGCAGGCCAGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTTAAPS*SRPGHS
Trigger: ACTGTGGCCTGGCCTGCTCCAGGATGGTGCTGCGGT...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTGTGCGGCAGAAGCAGTaGTGGCCACTGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTVRQKQ*WPLGVK
Trigger: CTTCACCCCCAGTGGCCACCACTGCTTCTGCCGCAC...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACACATCTGTGCCATAGCTaGTTCTGGCCTCCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTHLCHS*FWPPQS
Trigger: ACTTTGAGGAGGCCAGAACCAGCTATGGCACAGATG...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGAGACCATTGCCATaGATCTGGCTCAAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: GGIINHWAQGHMQHFQERGRPLP*IWLKGN
Trigger: GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCC...TCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGTATCATCAACCACTaGGCACAGGGGCATATGCAG +
Preference number: 4 (lower is better)
Translates to: GGIINHWAQGHMQHFQERGIINH*AQGHMQ
Trigger: CTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC...TCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGTATCCTGTGCAATCTaGTGTGAAGACCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GIINHWAQGHMQHFQERGVSCAI*CEDQVG
Trigger: CCCAACCTGGTCTTCACACCAGATTGCACAGGATAC...CCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGTGTGTTGTAAGATCCTaGGCAGGAACCCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GDHCHGSGSKATRALSGLCVVRS*AGTPLL
Trigger: GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACA...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCACCCATTTCCCACTTTaGGAGGCCGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLTHFPL*EAEAGG
Trigger: TCCACCTGCCTCGGCCTCCCAAAGTGGGAAATGGGT...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAAGCAATTTGGCTGGGTaGTCTCACTGCCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTSNLAG*SHCPPK
Trigger: TTTAGGAGGGCAGTGAGACCACCCAGCCAAATTGCT...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCGATGTCCAGGCTCTCTaGCTCCATTTTCATGACTTG +
Preference number: 4 (lower is better)
Translates to: WAAVGVMCCGQKSLMSRLDVQAL*LHFHDL
Trigger: CAAGTCATGAAAATGGAGCCAGAGAGCCTGGACATC...GAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CAA 72 bp ACCCAGGAGTGCAGGGATGGTATCACTGTTGCCCCTTaGAAAATGACCCATTTCCCACTTTGGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TQECRDGITVAP*KMTHFPLWEAE
Trigger: CTCGGCCTCCCAAAGTGGGAAATGGGTCATTTTCAAAGGGGCAACAGTGATACCATCCCTGCACTCCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGTTAAGGCAATGGAGATaGGACCAGTCTAGAGCCAAC +
Preference number: 4 (lower is better)
Translates to: GDHCHGSGSKATRALSGLLRQWR*DQSRAN
Trigger: GTTGGCTCTAGACTGGTCTCATCTCCATTGCCTTAA...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp ACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATTTAAGGCAATGGAGATaGGACCAGTCTAGAGCCAAC +
Preference number: 4 (lower is better)
Translates to: TGRQSSCASLRVPGTLPDLRQWR*DQSRAN
Trigger: GTTGGCTCTAGACTGGTCTCATCTCCATTGCCTTAA...ATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCAACAAATGAAATTGTaGCGGGAAGTCCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: GRWWWYHQPLGTGAYAALQQMKL*REVLAL
Trigger: AAGGGCCAGGACTTCCCGTCACAATTTCATTTGTTG...AAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR GCA 90 bp ACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATCACCTTGCAGGCCTTTaGTTGTGCAAACAGCTGATT +
Preference number: 4 (lower is better)
Translates to: TGRQSSCASLRVPGTLPDHLAGL*LCKQLI
Trigger: AATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTG...ATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGCCTGGTAGTCAGGAGTaGGGCAGAAGCAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLPGSQE*GRSSGG
Trigger: GCCACCACTGCTTCTGCCGCACTCCTGACTACCAGG...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTCTCCAGGCTCAGTCCTaGGGTCTGTGGGGAGACCAT +
Preference number: 4 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFLQAQS*GLWGDH
Trigger: ATGGTCTCCCCACAGACCGCAGGACTGAGCCTGGAG...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGATTGGGGTCAGCTATaGTGTCTCCAGACACTCACA +
Preference number: 4 (lower is better)
Translates to: GGIINHWAQGHMQHFQERDWGQL*CLQTLT
Trigger: TGTGAGTGTCTGGAGACAGCATAGCTGACCCCAATC...TCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCGGATGGTATCACTGTTaGCCCTTTGAAAATGACCCA +
Preference number: 4 (lower is better)
Translates to: IINHWAQGHMQHFQERGAGWYHC*PFENDP
Trigger: TGGGTCATTTTCAAAGGGGCAACAGTGATACCATCC...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGAAAGTCCCCTGGCGGTaGCGGGATCAACAAATGAAA +
Preference number: 4 (lower is better)
Translates to: WYHQPLGTGAYAALPGERKVPWR*RDQQMK
Trigger: TTTCATTTGTTGATCCCGGCACCGCCAGGGGACTTT...CCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTCATCTGTGCCATAGCTaGTTCTGGCCTCCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPHLCHS*FWPPQS
Trigger: ACTTTGAGGAGGCCAGAACCAGCTATGGCACAGATG...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGGGACTGGACTTCCTGTaGGCGCAGCTGGAGTCAAGG +
Preference number: 4 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLGLDFL*AQLESR
Trigger: CCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCC...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AACTTGGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACATACTGTCCTGACAAGTaGCATCCGTCAAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: NLGPWVGRWWWYHQPLGTYCPDK*HPSSNF
Trigger: GAAGTTGCTTGACGGATGCCACTTGTCAGGACAGTA...TGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCCAGAGCTGGAGGACCTaGAGGGCTGTGGGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: QALWLHFHDLCKNATQCVQSWRT*RAVGAL
Trigger: TAAAGCCCCCACAGCCCTCCAGGTCCTCCAGCTCTG...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCAAAAAGAACTTGAGCTaGCTAACTGCCCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALKKNLS*LTALCR
Trigger: TCTGCACAGGGCAGTTAGCCAGCTCAAGTTCTTTTT...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGCCACTCCCTAGTGACAGCCCTAACAGCATGTGCACTGTCTAAATCACATCCCACAGCACCTCCCTCTTaGCCAAAGGCTTTGTCTAGG +
Preference number: 4 (lower is better)
Translates to: GHSLVTALTACALSKSHPTAPPS*PKALSR
Trigger: CCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGT...GGGATGTGATTTAGACAGTGCACATGCTGTTAGGGCTGTCACTAGGGAGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACGATGTCCAGGCTCTCTaGCTCCATTTTCATGACTTG +
Preference number: 4 (lower is better)
Translates to: DHCHGSGSKATRALSGLDDVQAL*LHFHDL
Trigger: CAAGTCATGAAAATGGAGCCAGAGAGCCTGGACATC...GTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGCCACTCCCTAGTGACAGCCCTAACAGCATGTGCACTGTCTAAATCACATCCCCGGTGTCATGTGCTGTaGGCAAAAGTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: GHSLVTALTACALSKSHPRCHVL*AKVPDV
Trigger: GACATCAGGGACTTTTGCCCACAGCACATGACACCG...GGGATGTGATTTAGACAGTGCACATGCTGTTAGGGCTGTCACTAGGGAGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CAA 72 bp CTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTaGGCTGGGTGGTCTCACTGCCCTCCTAAACAGAGC +
Preference number: 4 (lower is better)
Translates to: LGQRLCLGLRSN*AGWSHCPPKQS
Trigger: GCTCTGTTTAGGAGGGCAGTGAGACCACCCAGCCAAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTCTGTGCAATCTGGTGTaGAGACCAGGTTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTLCNLV*RPGWVG
Trigger: GCCCACCCAACCTGGTCTTCACACCAGATTGCACAG...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTCACATCCCACCATCCTaGAAACTTCATTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPHIPPS*KLHFLP
Trigger: TGGGAGGAAATGAAGTTTTCAGGATGGTGGGATGTG...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp ACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTTCTGGGACCAGAGACTaGGTGTTTCTAAACATTTTG +
Preference number: 4 (lower is better)
Translates to: TRHWQTKQLCQSPSSWDSSGTRD*VFLNIL
Trigger: CAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGA...AGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTGTGGGCAAAAGTCCCTaGTGTCCAGGCTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTVGKSP*CPGSLA
Trigger: AGCCAGAGAGCCTGGACATCAGGGACTTTTGCCCAC...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAGAGCGGCGGCCCCGCTaGCTCCGCCTCCGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FISSHWFPSYSYSNNFTRERRPR*LRLRPH
Trigger: ATGAGGACGGAGGCGGAGGCAGCGGGGCCGCCGCTC...TCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
CDS-3UTR GCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTATGCTCCTGGTCAGCTaGAGCTTCTGCAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTMLLVS*SFCRAL
Trigger: GAGAGCCCTGCAGAAGCTGCAGCTGACCAGGAGCAT...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTGCAGGCCTTTGCTTGTaGAAACAGCTGATTCACCCG +
Preference number: 4 (lower is better)
Translates to: FIPVARMNKAQLSHMASGAGLCL*KQLIHP
Trigger: CGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGC...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTTCTCCACCAGCACCTTaGAGGCCTTTGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: FIPVARMNKAQLSHMASGSPPAP*RPLLVQ
Trigger: TTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGA...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCTCCACCAGCACCTTaGAGGCCTTTGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: IPFIPVARMNKAQLSHMASPPAP*RPLLVQ
Trigger: TTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGA...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTGGATGTCCTCATCTGTaGCATAGCTGGTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: IPFIPVARMNKAQLSHMAGCPHL*HSWFWP
Trigger: AGGCCAGAACCAGCTATGGCACAGATGAGGACATCC...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCAGAGCTCTATGCTACTTaGTGTGTTGTAAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: CGLWGDHCHGSGSKATRAELYAT*CVVRSW
Trigger: CCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGGATGGTATCACTGTTaGCCCTTTGAAAATGACCCA +
Preference number: 4 (lower is better)
Translates to: GIINHWAQGHMQHFQERGGWYHC*PFENDP
Trigger: TGGGTCATTTTCAAAGGGGCAACAGTGATACCATCC...CCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCAGGATGGTATCACTGTTaGCCCTTTGAAAATGACCCA +
Preference number: 4 (lower is better)
Translates to: CGLWGDHCHGSGSKATRAGWYHC*PFENDP
Trigger: TGGGTCATTTTCAAAGGGGCAACAGTGATACCATCC...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCGCACAGCTGCCACCATaGCATGCCTTGGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: QALWLHFHDLCKNATQCVAQLPP*HALGIG
Trigger: TCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGC...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CCCACCATCCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTTCACTGTCGTCCAGCTaGCCCAGGTACCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PTILKTSFPPTGFLHTAISLSSS*PRYRST
Trigger: GGTGCTGCGGTACCTGGGCCAGCTGGACGACAGTGA...AATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGGATGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTGGTAGGCCAGGTCGATaGTCCAGATGCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTGRPGR*SRCSWS
Trigger: TGACCAGGAGCATCTGGACCATCGACCTGGCCTACC...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCTGGGACTCTGCCAGATaGGCTGAGGCTGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: QALWLHFHDLCKNATQCVWDSAR*AEAAVP
Trigger: TGGAACTGCAGCCTCAGCCCATCTGGCAGAGTCCCA...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGTGACCTTTAACTTGTaGCATGCCCTGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPVTFNL*HALRSH
Trigger: ATGGCTTCTCAGGGCATGCCACAAGTTAAAGGTCAC...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTCGGTGTCATGTGCTGTaGGCAAAAGTCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: FIPVARMNKAQLSHMASGRCHVL*AKVPDV
Trigger: GACATCAGGGACTTTTGCCCACAGCACATGACACCG...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTCCCAACTGTCCCACATaGCTTCAGGTGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFPNCPT*LQVLCW
Trigger: CCAGCACAGCACCTGAAGCCATGTGGGACAGTTGGG...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTCGTCCAGCCTGTCCTTaGTGTGGGGTGCTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTRPACP*CGVLGS
Trigger: ACTTCCAAGCACCCCACACCAAGGACAGGCTGGACG...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621833.4
CDS-3UTR TCA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTCTGGCTCCATTTTCATaGCTTGTGCAAGAATGCAAC +
Preference number: 4 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPLAPFS*LVQECN
Trigger: GTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAG...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCCACTCCCTAGTGACAGCCCTAACAGCATGTGCACTGTCTAAATCACATCCCCACCTTGCAGGCCTTTaGTTGTGCAAACAGCTGATT +
Preference number: 4 (lower is better)
Translates to: GHSLVTALTACALSKSHPHLAGL*LCKQLI
Trigger: AATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTG...GGGATGTGATTTAGACAGTGCACATGCTGTTAGGGCTGTCACTAGGGAGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTTGTGAGGTGTGTCTATaGTGGGTGGCAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFCEVCL*WVAGVR
Trigger: TCTGACCCCTGCCACCCAGCATAGACACACCTCACA...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGATAAAATCTCTGCAATaGAAAAGATCCCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: QGHCRDWTSCGRSWSQGLIKSLQ*KRSLSS
Trigger: GGATGAAAGGGATCTTTTGCATTGCAGAGATTTTAT...CAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCGAACTATCGTACTGGTaGCCTAGTTTCCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: QALWLHFHDLCKNATQCVELSYW*PSFPAG
Trigger: GCCGGCTGGGAAACTAGGGCACCAGTACGATAGTTC...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621833.4
CDS-3UTR CCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTGTAGGCAGGTGGTGGTaGTATCATCAACCACTGGGC +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTVGRWW*YHQPLG
Trigger: GCCCAGTGGTTGATGATACCACCACCACCTGCCTAC...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CCCACCATCCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCAGAGCTGGAGGACCTaGAGGGCTGTGGGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: PTILKTSFPPTGFLHTAIQSWRT*RAVGAL
Trigger: TAAAGCCCCCACAGCCCTCCAGGTCCTCCAGCTCTG...AATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGGATGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTTGTCAGGATTTTGGCTaGTGTCAGGAGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFCQDFG*CQEASW
Trigger: CCAGGAGGCCTCCTGACACCAGCCAAAATCCTGACA...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GGCCACTCCCTAGTGACAGCCCTAACAGCATGTGCACTGTCTAAATCACATCCCGATGTCCAGGCTCTCTaGCTCCATTTTCATGACTTG +
Preference number: 4 (lower is better)
Translates to: GHSLVTALTACALSKSHPDVQAL*LHFHDL
Trigger: CAAGTCATGAAAATGGAGCCAGAGAGCCTGGACATC...GGGATGTGATTTAGACAGTGCACATGCTGTTAGGGCTGTCACTAGGGAGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGCTTCAGGTGCTGTGCTaGTCCCCAGCATGTGAACAG +
Preference number: 4 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLLQVLC*SPACEQ
Trigger: CTGTTCACATGCTGGGGACCAGCACAGCACCTGAAG...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCGGTCGGCATAGGCTaGGTTGTTGTAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: IPFIPVARMNKAQLSHMASVGIG*VVVEDA
Trigger: TGCATCTTCTACAACAACCCAGCCTATGCCGACCGA...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398245.8
ENST00000435822.6
CDS-3UTR CCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTTTGGTGTGGGGTGCTTaGAAGTGTGAGCACCCTCTC +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTLVWGA*KCEHPL
Trigger: GAGAGGGTGCTCACACTTCCAAGCACCCCACACCAA...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621833.4
CDS-3UTR TCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTACATTTTGGCTGGACTaGGGTGCTGTTACCACCCTC +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTTFWLD*GAVTTL
Trigger: GAGGGTGGTAACAGCACCTCAGTCCAGCCAAAATGT...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTGTCAGCTGCAGCTTCTaGAGGGCTCTCTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTVSCSF*RALSNS
Trigger: TGAGTTTGAGAGAGCCCTGCAGAAGCTGCAGCTGAC...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGGGATGTCCTCATCTGTaGCATAGCTGGTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLGCPHL*HSWFWP
Trigger: AGGCCAGAACCAGCTATGGCACAGATGAGGACATCC...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTCTGTGGGGAGACCATTaGCATGGATCTGGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTLWGDH*HGSGSK
Trigger: CTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAG...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCAAGGAAAGAGCTCTATaGTACTTGCTGTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVKERAL*YLLCCK
Trigger: CTTACAACACAGCAAGTAGCATAGAGCTCTTTCCTT...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGAAGGAAAGAGCTCTATaGTACTTGCTGTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: GIINHWAQGHMQHFQERGKERAL*YLLCCK
Trigger: CTTACAACACAGCAAGTAGCATAGAGCTCTTTCCTT...CCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCAAAGGAAAGAGCTCTATaGTACTTGCTGTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAKERAL*YLLCCK
Trigger: CTTACAACACAGCAAGTAGCATAGAGCTCTTTCCTT...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCAGCAGGACCCAGGAGTaGAGGGATGGTATCACTGTT +
Preference number: 4 (lower is better)
Translates to: QALWLHFHDLCKNATQCVSRTQE*RDGITV
Trigger: AACAGTGATACCATCCCTGCACTCCTGGGTCCTGCT...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCGGGCTACCACCATTTTaGAGTGAGAATAATGTTTAT +
Preference number: 4 (lower is better)
Translates to: IINHWAQGHMQHFQERGAGLPPF*SENNVY
Trigger: ATAAACATTATTCTCACTGCAAAATGGTGGTAGCCC...GGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621833.4
CDS-3UTR CCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTGGGAGACCATTGCCATaGATCTGGCTCAAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFGRPLP*IWLKGN
Trigger: GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCC...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTTACTGTCCTGACAAGTaGCATCCGTCAAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: FIPVARMNKAQLSHMASGYCPDK*HPSSNF
Trigger: GAAGTTGCTTGACGGATGCCACTTGTCAGGACAGTA...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTCCAGGAGTGCAGGGATaGTATCACTGTTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFPGVQG*YHCCPF
Trigger: AAAGGGGCAACAGTGATACCATCCCTGCACTCCTGG...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCGTGACCTTTAACTTGTaGCATGCCCTGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLVTFNL*HALRSH
Trigger: ATGGCTTCTCAGGGCATGCCACAAGTTAAAGGTCAC...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATGCCAACACCGGTCTCTaGAACCCAGAAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PENFISSHWFPSYSYSNNANTGL*NPEGLP
Trigger: GGGCAGCCCTTCTGGGTTTCAGAGACCGGTGTTGGC...ATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CCCACCATCCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCAAGAGGGCAGACCCTaGTGTCAGGATTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PTILKTSFPPTGFLHTAIQEGRP*CQDFGW
Trigger: CCAGCCAAAATCCTGACAGCAGGGTCTGCCCTCTTG...AATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGGATGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCATTTTCATGACTTGTaGAAGAATGCAACACAGTGT +
Preference number: 4 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASHFHDL*KNATQC
Trigger: ACACTGTGTTGCATTCTTGCACAAGTCATGAAAATG...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACATTTTCATGACTTGTaGAAGAATGCAACACAGTGT +
Preference number: 4 (lower is better)
Translates to: CGLWGDHCHGSGSKATRAHFHDL*KNATQC
Trigger: ACACTGTGTTGCATTCTTGCACAAGTCATGAAAATG...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCATAAAATCTCTGCAATaGAAAAGATCCCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALIKSLQ*KRSLSS
Trigger: GGATGAAAGGGATCTTTTGCATTGCAGAGATTTTAT...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGATAAAATCTCTGCAATaGAAAAGATCCCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMIKSLQ*KRSLSS
Trigger: GGATGAAAGGGATCTTTTGCATTGCAGAGATTTTAT...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATCGGCAGAAGCAGTGGTaGCCACTGGGGGTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PENFISSHWFPSYSYSNNRQKQW*PLGVKQ
Trigger: CTGCTTCACCCCCAGTGGCCACCACTGCTTCTGCCG...ATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTCATCTGTGCCATAGCTaGTTCTGGCCTCCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTHLCHS*FWPPQS
Trigger: ACTTTGAGGAGGCCAGAACCAGCTATGGCACAGATG...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAAGGGCACTGTCGGGACTaGACTTCCTGTGGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQGHCRD*TSCGRS
Trigger: GCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTGTATCCTGTGCAATCTaGTGTGAAGACCAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFVSCAI*CEDQVG
Trigger: CCCAACCTGGTCTTCACACCAGATTGCACAGGATAC...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTGTGTTGTAAGATCCTaGGCAGGAACCCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLCVVRS*AGTPLL
Trigger: GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACA...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCAAAAAGAACTTGAGCTaGCTAACTGCCCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLKKNLS*LTALCR
Trigger: TCTGCACAGGGCAGTTAGCCAGCTCAAGTTCTTTTT...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CAA 72 bp CTTTCTCATTCATCTTTCAGGAAGGTGACCTTTAACTaGTGGCATGCCCTGAGAAGCCATCCTCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: LSHSSFRKVTFN*WHALRSHPLGP
Trigger: TGGTCCCAGAGGATGGCTTCTCAGGGCATGCCACAAGTTAAAGGTCACCTTCCTGAAAGATGAATGAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
3UTR CAA 72 bp AAACCACTGGCCAAGTCCCTTTCTCTGAAAAAGAACTaGAGCTGGCTAACTGCCCTGTGCAGAGGTGTTAGT +
Preference number: 4 (lower is better)
Translates to: KPLAKSLSLKKN*SWLTALCRGVS
Trigger: ACTAACACCTCTGCACAGGGCAGTTAGCCAGCTCAAGTTCTTTTTCAGAGAAAGGGACTTGGCCAGTGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAACACCACCTGAAGATGGCAGGTGGATCACCTaGGCTCAGGGGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: WFPSYSYSNNFTRTPPEDGRWIT*AQGFET
Trigger: GGTCTCGAACCCCTGAGCTCAGGTGATCCACCTGCC...ATCTTCAGGTGGTGTTCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGCACATCCCACCATCCTaGAAACTTCATTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLHIPPS*KLHFLP
Trigger: TGGGAGGAAATGAAGTTTTCAGGATGGTGGGATGTG...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAACACCACCTGAAGATCTGGTCCCCAGCATGTaGACAGGCTGGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: WFPSYSYSNNFTRTPPEDLVPSM*TGWAAV
Trigger: GACAGCTGCCCAGCCTGTTCACATGCTGGGGACCAG...ATCTTCAGGTGGTGTTCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CCCACCATCCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTTCTCCACCAGCACCTTaGAGGCCTTTGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: PTILKTSFPPTGFLHTAISPPAP*RPLLVQ
Trigger: TTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGA...AATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGGATGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATCCCACACCCCACAGCTaGTGTGCATGGGTACTCCTG +
Preference number: 4 (lower is better)
Translates to: PENFISSHWFPSYSYSNNPTPHS*CAWVLL
Trigger: CAGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGG...ATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATCCCACACCCCACAGCTaGTGTGCATGGGTACTCCAG +
Preference number: 4 (lower is better)
Translates to: PENFISSHWFPSYSYSNNPTPHS*CAWVLQ
Trigger: CTGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGG...ATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398245.8
CDS-3UTR CCA 90 bp TTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGACGGCAGAAGCAGTGGTaGCCACTGGGGGTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: FISSHWFPSYSYSNNFTRRQKQW*PLGVKQ
Trigger: CTGCTTCACCCCCAGTGGCCACCACTGCTTCTGCCG...TCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAGTGCGGCAGAAGCAGTaGTGGCCACTGGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FISSHWFPSYSYSNNFTRVRQKQ*WPLGVK
Trigger: CTTCACCCCCAGTGGCCACCACTGCTTCTGCCGCAC...TCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp TGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAACACCACCTGAAGATGCAGACTCCCAAGACTaGGCCAGCTGCCTCGTCAGC +
Preference number: 4 (lower is better)
Translates to: WFPSYSYSNNFTRTPPEDADSQD*ASCLVS
Trigger: GCTGACGAGGCAGCTGGCCCAGTCTTGGGAGTCTGC...ATCTTCAGGTGGTGTTCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCGTGACCTTTAACTTGTaGCATGCCCTGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: QALWLHFHDLCKNATQCVVTFNL*HALRSH
Trigger: ATGGCTTCTCAGGGCATGCCACAAGTTAAAGGTCAC...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTGTGACCTTTAACTTGTaGCATGCCCTGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFVTFNL*HALRSH
Trigger: ATGGCTTCTCAGGGCATGCCACAAGTTAAAGGTCAC...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATGGTGCTTGGGGTGAGTaGCATGACAACACACGGCAC +
Preference number: 4 (lower is better)
Translates to: PENFISSHWFPSYSYSNNGAWGE*HDNTRH
Trigger: GTGCCGTGTGTTGTCATGTCACTCACCCCAAGCACC...ATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp GCAATGCAAAAGATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGCTGGCTCCATTTTCATaGCTTGTGCAAGAATGCAAC +
Preference number: 4 (lower is better)
Translates to: AMQKIPFIPVARMNKAQLLAPFS*LVQECN
Trigger: GTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAG...CAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGATCTTTTGCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAATTCCCAGAGCACTGCTaGCAGCCACGAGGCCTACCA +
Preference number: 4 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQFPEHC*QPRGLP
Trigger: TGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAA...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATACCCCACAGCTGCTGTaGATGGGTACTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: PENFISSHWFPSYSYSNNTPQLL*MGTPGH
Trigger: ATGCCCTGGAGTACCCATGCACAGCAGCTGTGGGGT...ATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398245.8
CDS-3UTR CCA 90 bp CCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATGGTAGGCCAGGTCGATaGTCCAGATGCTCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PENFISSHWFPSYSYSNNGRPGR*SRCSWS
Trigger: TGACCAGGAGCATCTGGACCATCGACCTGGCCTACC...ATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CCCACCATCCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCATCTGTGCCATAGCTaGTTCTGGCCTCCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PTILKTSFPPTGFLHTAIHLCHS*FWPPQS
Trigger: ACTTTGAGGAGGCCAGAACCAGCTATGGCACAGATG...AATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGGATGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp CCCACCATCCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTTGTGTTGTAAGATCCTaGGCAGGAACCCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PTILKTSFPPTGFLHTAICVVRS*AGTPLL
Trigger: GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACA...AATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGGATGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAATGTGACGGGAAGTCCTaGCCCTTGGCCCAACCTCCT +
Preference number: 4 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQCDGKS*PLAQPP
Trigger: AGGAGGTTGGGCCAAGGGCCAGGACTTCCCGTCACA...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621833.4
CDS-3UTR TCA 90 bp CTAACAGCACCTCCCTCTTGGCCAAAGGCTTTGTCTAGGGTTGAGAAGCAATTTTCTGGGACCAGAGACTaGGTGTTTCTAAACATTTTG +
Preference number: 4 (lower is better)
Translates to: LTAPPSWPKALSRVEKQFSGTRD*VFLNIL
Trigger: CAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGA...AAATTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATTGTGAGGTGTGTCTATaGTGGGTGGCAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PENFISSHWFPSYSYSNNCEVCL*WVAGVR
Trigger: TCTGACCCCTGCCACCCAGCATAGACACACCTCACA...ATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTCATTTTCATGACTTGTaGAAGAATGCAACACAGTGT +
Preference number: 4 (lower is better)
Translates to: FIPVARMNKAQLSHMASGHFHDL*KNATQC
Trigger: ACACTGTGTTGCATTCTTGCACAAGTCATGAAAATG...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTCATTTTCATGACTTGTaGAAGAATGCAACACAGTGT +
Preference number: 4 (lower is better)
Translates to: IPFIPVARMNKAQLSHMAHFHDL*KNATQC
Trigger: ACACTGTGTTGCATTCTTGCACAAGTCATGAAAATG...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAAAGAAGATGCAGCCAGTaGCCCGGTTGTAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQRRCSQ*PGCSHA
Trigger: TGCGTGGCTACAACCGGGCCACTGGCTGCATCTTCT...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAAGGTGCTGCACATTCCTaGGTCGGCATAGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQGAAHS*VGIGWV
Trigger: AACCCAGCCTATGCCGACCCAGGAATGTGCAGCACC...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407471.7
ENST00000621833.4
CDS-3UTR CCA 90 bp TGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAACACCACCTGAAGATCCCAACTGTCCCACATaGCTTCAGGTGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WFPSYSYSNNFTRTPPEDPNCPT*LQVLCW
Trigger: CCAGCACAGCACCTGAAGCCATGTGGGACAGTTGGG...ATCTTCAGGTGGTGTTCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAATGTTACCACCCTCCATaGAGGCCACTCCCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQCYHPP*RPLPSD
Trigger: GTCACTAGGGAGTGGCCTTCATGGAGGGTGGTAACA...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAACACCACCTGAAGATTCCCCGTGGCTAGAATaGACAAAGCCCAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: WFPSYSYSNNFTRTPPEDSPWLE*TKPNCP
Trigger: GGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGA...ATCTTCAGGTGGTGTTCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGATTATTCCCAGAGCACTaGTGCCAGCCACGAGGCCTA +
Preference number: 4 (lower is better)
Translates to: FISSHWFPSYSYSNNFTRLFPEH*CQPRGL
Trigger: TAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAATAA...TCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAACACCACCTGAAGATGCTGTCGGTGTCATGTaGTGTGGGCAAAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: WFPSYSYSNNFTRTPPEDAVGVM*CGQKSL
Trigger: CAGGGACTTTTGCCCACAGCACATGACACCGACAGC...ATCTTCAGGTGGTGTTCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp GAGCTCTATGCTACTTGCTGTGTTGTAAGATCCTGGGCAGGAACCCCTCTTCTCATAAAATCTCTGCAATaGAAAAGATCCCTTTCATCC +
Preference number: 4 (lower is better)
Translates to: ELYATCCVVRSWAGTPLLIKSLQ*KRSLSS
Trigger: GGATGAAAGGGATCTTTTGCATTGCAGAGATTTTAT...GAGAAGAGGGGTTCCTGCCCAGGATCTTACAACACAGCAAGTAGCATAGAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp CCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATAAAGTCCCCTGGCGGTaGCGGGATCAACAAATGAAA +
Preference number: 4 (lower is better)
Translates to: PENFISSHWFPSYSYSNNKVPWR*RDQQMK
Trigger: TTTCATTTGTTGATCCCGGCACCGCCAGGGGACTTT...ATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621833.4
CDS-3UTR CCA 90 bp CCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATTGGGTCGGCATAGGCTaGGTTGTTGTAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: PENFISSHWFPSYSYSNNWVGIG*VVVEDA
Trigger: TGCATCTTCTACAACAACCCAGCCTATGCCGACCCA...ATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407471.7
ENST00000621833.4
CDS-3UTR CCA 90 bp CCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATCATCTGTGCCATAGCTaGTTCTGGCCTCCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PENFISSHWFPSYSYSNNHLCHS*FWPPQS
Trigger: ACTTTGAGGAGGCCAGAACCAGCTATGGCACAGATG...ATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR GCA 90 bp TTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAGATTGGGGTCAGCTATaGTGTCTCCAGACACTCACA +
Preference number: 4 (lower is better)
Translates to: FISSHWFPSYSYSNNFTRDWGQL*CLQTLT
Trigger: TGTGAGTGTCTGGAGACAGCATAGCTGACCCCAATC...TCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAAAGCAATTTGGCTGGGTaGTCTCACTGCCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQSNLAG*SHCPPK
Trigger: TTTAGGAGGGCAGTGAGACCACCCAGCCAAATTGCT...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAACACCACCTGAAGATCACATCCCACCATCCTaGAAACTTCATTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: WFPSYSYSNNFTRTPPEDHIPPS*KLHFLP
Trigger: TGGGAGGAAATGAAGTTTTCAGGATGGTGGGATGTG...ATCTTCAGGTGGTGTTCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGACACATCCCACCATCCTaGAAACTTCATTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: FISSHWFPSYSYSNNFTRHIPPS*KLHFLP
Trigger: TGGGAGGAAATGAAGTTTTCAGGATGGTGGGATGTG...TCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp CCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATCTGGCTCCATTTTCATaGCTTGTGCAAGAATGCAAC +
Preference number: 4 (lower is better)
Translates to: PENFISSHWFPSYSYSNNLAPFS*LVQECN
Trigger: GTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAG...ATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CCA 90 bp AAAGTACCTTCACTCTTGCTATTACTGTTTTACTTGAAGGTGATTACCCCTCAATACTGTCCTGACAAGTaGCATCCGTCAAGCAACTTC +
Preference number: 4 (lower is better)
Translates to: KVPSLLLLLFYLKVITPQYCPDK*HPSSNF
Trigger: GAAGTTGCTTGACGGATGCCACTTGTCAGGACAGTA...TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGGTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR TCA 90 bp TTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGATCTGGGACCAGAGACTaGGTGTTTCTAAACATTTTG +
Preference number: 4 (lower is better)
Translates to: FISSHWFPSYSYSNNFTRSGTRD*VFLNIL
Trigger: CAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGA...TCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS GCA 90 bp GGGCGGTCGGTGCGTGTCGAGTTCCTTCTCCGCCACCGCCGCCGCTaGGGAGGAGAGAACGGGAGGCGGCGGCTGGCGGTGCCGGGATCA +
Preference number: 5 (lower is better)
Translates to: GRSVRVEFLLRHRRR*GGENGRRRLAVPGS
Trigger: TGATCCCGGCACCGCCAGCCGCCGCCTCCCGTTCTCTCCTCCGCAGCGGCGGCGGTGGCGGAGAAGGAACTCGACACGCACCGACCGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407973.2
CDS CCA 90 bp CGCCCATGGCCCCGGCCCAGAGCGGGCTACAGCTTCCGCTTCGGCTaGGGCGGGAGGGCGGTCGGTGCGTGTCGAGTTCCTTCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: RPWPRPRAGYSFRFG*GGRAVGACRVPSPP
Trigger: TGGCGGAGAAGGAACTCGACACGCACCGACCGCCCTCCCGCCCCAGCCGAAGCGGAAGCTGTAGCCCGCTCTGGGCCGGGGCCATGGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398245.8
ENST00000402766.5
ENST00000407471.7
ENST00000407973.2
ENST00000435822.6
ENST00000468170.1
CDS GCA 90 bp TCGTTGCGGCGGCCCCCGGGCCCAGTCATCAGCCCTCTTTTCCGGTaGCGGAACTATCGTACTGGTGCCCTAGTTTCCCAGCCGGCAGGC +
Preference number: 5 (lower is better)
Translates to: SLRRPPGPVISPLFR*RNYRTGALVSQPAG
Trigger: GCCTGCCGGCTGGGAAACTAGGGCACCAGTACGATAGTTCCGGCACCGGAAAAGAGGGCTGATGACTGGGCCCGGGGGCCGCCGCAACGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS TCA 90 bp CGCCTTGCCGTCCAGCCTGTCCTTGGTGTGGGGTGCTTGGAAGTGTaGGCACCCTCTCTGGCTCTTTGCCGGCCCCAAGGGTCGTTGCGG +
Preference number: 5 (lower is better)
Translates to: RLAVQPVLGVGCLEV*APSLALCRPQGSLR
Trigger: CCGCAACGACCCTTGGGGCCGGCAAAGAGCCAGAGAGGGTGCTCACACTTCCAAGCACCCCACACCAAGGACAGGCTGGACGGCAAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404664.7
ENST00000407973.2
ENST00000621833.4
CDS TCA 90 bp ACGGGAGGCGGCGGCTGGCGGTGCCGGGATCAACAAATGAAATTGTaGCGGGAAGTCCTGGCCCTTGGCCCAACCTCCTGCTGTCCCCGG +
Preference number: 5 (lower is better)
Translates to: TGGGGWRCRDQQMKL*REVLALGPTSCCPR
Trigger: CCGGGGACAGCAGGAGGTTGGGCCAAGGGCCAGGACTTCCCGTCACAATTTCATTTGTTGATCCCGGCACCGCCAGCCGCCGCCTCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407973.2
CDS CCA 90 bp CGCGTCTCCGCCTTGCCGTCCAGCCTGTCCTTGGTGTGGGGTGCTTaGAAGTGTGAGCACCCTCTCTGGCTCTTTGCCGGCCCCAAGGGT +
Preference number: 5 (lower is better)
Translates to: RVSALPSSLSLVWGA*KCEHPLWLFAGPKG
Trigger: ACCCTTGGGGCCGGCAAAGAGCCAGAGAGGGTGCTCACACTTCCAAGCACCCCACACCAAGGACAGGCTGGACGGCAAGGCGGAGACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404664.7
ENST00000407973.2
ENST00000621833.4
CDS CCA 90 bp GAGGGCCCAAGCCCCGCGTCTCCGCCTTGCCGTCCAGCCTGTCCTTaGTGTGGGGTGCTTGGAAGTGTGAGCACCCTCTCTGGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: EGPSPASPPCRPACP*CGVLGSVSTLSGSL
Trigger: CAAAGAGCCAGAGAGGGTGCTCACACTTCCAAGCACCCCACACCAAGGACAGGCTGGACGGCAAGGCGGAGACGCGGGGCTTGGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404664.7
ENST00000407973.2
ENST00000621833.4
CDS-3UTR CAA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGCTCAGCCCTGGGGGATaGGGGTCAGCTATGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGLSPGG*GSAMLS
Trigger: AGACAGCATAGCTGACCCCAATCCCCCAGGGCTGAG...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS CCA 90 bp GGGCCCAGTCATCAGCCCTCTTTTCCGGTGCCGGAACTATCGTACTaGTGCCCTAGTTTCCCAGCCGGCAGGCGGAGTGAGGAGGAAGCG +
Preference number: 5 (lower is better)
Translates to: GPSHQPSFPVPELSY*CPSFPAGRRSEEEA
Trigger: CGCTTCCTCCTCACTCCGCCTGCCGGCTGGGAAACTAGGGCACCAGTACGATAGTTCCGGCACCGGAAAAGAGGGCTGATGACTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CAA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCGACGGGCACAGGCAGTaGCACAAAGTCCCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: TALADKAAVPVSEFLGLCDGHRQ*HKVPGL
Trigger: GAGCCCGGGGACTTTGTGCAACTGCCTGTGCCCGTC...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402766.5
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
CDS-3UTR CAA 90 bp GGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAGGTGTGAAGACCAGGTaGGGTGGGCAGCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: GPQHVNRLGSCRCHVLWAGVKTR*GGQLQA
Trigger: AGCCTGCAGCTGCCCACCCAACCTGGTCTTCACACC...TGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTGGACCCTCTCTGGCTCTTaGCCGGCCCCAAGGGTCGTT +
Preference number: 5 (lower is better)
Translates to: CRDWTSCGRSWSQGLGSWTLSGS*PAPRVV
Trigger: AACGACCCTTGGGGCCGGCAAAGAGCCAGAGAGGGT...CCAAGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CAA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGCCCCGCGTCTCCGCCTaGCCGTCCAGCCTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRPRVSA*PSSLSL
Trigger: CAAGGACAGGCTGGACGGCAAGGCGGAGACGCGGGG...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS GCA 90 bp CCCAGTCATCAGCCCTCTTTTCCGGTGCCGGAACTATCGTACTGGTaGCCTAGTTTCCCAGCCGGCAGGCGGAGTGAGGAGGAAGCGGAG +
Preference number: 5 (lower is better)
Translates to: PSHQPSFPVPELSYW*PSFPAGRRSEEEAE
Trigger: CTCCGCTTCCTCCTCACTCCGCCTGCCGGCTGGGAAACTAGGGCACCAGTACGATAGTTCCGGCACCGGAAAAGAGGGCTGATGACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CAA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCGACGGGCACAGGCAGTaGCACAAAGTCCCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALDGHRQ*HKVPGL
Trigger: GAGCCCGGGGACTTTGTGCAACTGCCTGTGCCCGTC...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
CDS-3UTR CAA 90 bp CAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGAGACGGGCACAGGCAGTaGCACAAAGTCCCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: QHTALADKAAVPVSEFLGDGHRQ*HKVPGL
Trigger: GAGCCCGGGGACTTTGTGCAACTGCCTGTGCCCGTC...TCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402766.5
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
CDS-3UTR CAA 90 bp GCCCACACCCCACAGCTGCTGTGCATGGGTACTCCAGGGCATCCTGAGCGGGCCGCACCTTGCAGGCCTTaGCTTGTGCAAACAGCTGAT +
Preference number: 5 (lower is better)
Translates to: AHTPQLLCMGTPGHPERAAPCRP*LVQTAD
Trigger: ATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGC...GGCCCGCTCAGGATGCCCTGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398245.8
CDS-3UTR CAA 90 bp AAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGCTCAGCCCTGGGGGATaGGGGTCAGCTATGCTGTCT +
Preference number: 5 (lower is better)
Translates to: KGTVGTGLPVGAAGVKAWLSPGG*GSAMLS
Trigger: AGACAGCATAGCTGACCCCAATCCCCCAGGGCTGAG...CCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCCCCGCGTCTCCGCCTaGCCGTCCAGCCTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: VSDMTTHGTGRQSSCASLPRVSA*PSSLSL
Trigger: CAAGGACAGGCTGGACGGCAAGGCGGAGACGCGGGG...GAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CAA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGGGGAAGTCCTGGCCCTaGGCCCAACCTCCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMGKSWP*AQPPAV
Trigger: GACAGCAGGAGGTTGGGCCAAGGGCCAGGACTTCCC...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CAA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCGGGAAGTCCTGGCCCTaGGCCCAACCTCCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALGKSWP*AQPPAV
Trigger: GACAGCAGGAGGTTGGGCCAAGGGCCAGGACTTCCC...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621833.4
CDS TCA 90 bp TGTAGAAGATGCAGCCAGTGGCCCGGTTGTAGCCACGCAGCACGATaGAGTGGCCCTGGTAGTCAGGAGTGCGGCAGAAGCAGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: CRRCSQWPGCSHAAR*SGPGSQECGRSSGG
Trigger: GCCACCACTGCTTCTGCCGCACTCCTGACTACCAGGGCCACTTCATCGTGCTGCGTGGCTACAACCGGGCCACTGGCTGCATCTTCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398245.8
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000493099.1
ENST00000621833.4
CDS GCA 90 bp CAGCAGGAGGGCAGAGGAGCCCCACCTGCCAGGGCAGACGGTACATaGAGCAAGCCAGATCAGAAAGCTGTCTGTCCTAAGCAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: QQEGRGAPPARADGT*SKPDQKAVCPKQEQ
Trigger: CTGCTCCTGCTTAGGACAGACAGCTTTCTGATCTGGCTTGCTGCATGTACCGTCTGCCCTGGCAGGTGGGGCTCCTCTGCCCTCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480272.1
CDS-3UTR CAA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCGACGGGCACAGGCAGTaGCACAAAGTCCCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVDGHRQ*HKVPGL
Trigger: GAGCCCGGGGACTTTGTGCAACTGCCTGTGCCCGTC...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
CDS-3UTR CAA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGGCACCTTGCAGGCCTTaGCTTGTGCAAACAGCTGAT +
Preference number: 5 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGAPCRP*LVQTAD
Trigger: ATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGC...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTCAAGGCTTGGGGTCTaGGGGTATGCTTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSSRLGV*GYASSS
Trigger: GCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTGA...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGGACCCATTTCCCACTTaGGGAGGCCGAGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMDPFPT*GGRGRW
Trigger: CCACCTGCCTCGGCCTCCCAAAGTGGGAAATGGGTC...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACGACCCATTTCCCACTTaGGGAGGCCGAGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDDPFPT*GGRGRW
Trigger: CCACCTGCCTCGGCCTCCCAAAGTGGGAAATGGGTC...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp AGCAATGGGCGGGGGCACAGCTGCCACCATGCCATGCCTTGGGCATTGGAAGAGCCACCATGCCATGCCTaGGGCATTGGAAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SNGRGHSCHHAMPWALEEPPCHA*GIGRAG
Trigger: TCCTGCTCTTCCAATGCCCAAGGCATGGCATGGTGG...CTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCATTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGGCCCATGGGTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCGGGTTGAGAAGCAATTaGGCTGGGTGGTCTCACTGC +
Preference number: 5 (lower is better)
Translates to: GPMGRQVVVVSSTTGHRGGLRSN*AGWSHC
Trigger: GCAGTGAGACCACCCAGCCAAATTGCTTCTCAACCC...GCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GCCCACACCCCACAGCTGCTGTGCATGGGTACTCCAGGGCATCCTGAGCGGGCCAAGGTGACCTTTAACTaGTGGCATGCCCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: AHTPQLLCMGTPGHPERAKVTFN*WHALRS
Trigger: GCTTCTCAGGGCATGCCACAAGTTAAAGGTCACCTT...GGCCCGCTCAGGATGCCCTGGAGTACCCATGCACAGCAGCTGTGGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398245.8
CDS TCA 90 bp TTGCACAAAGTCCCCTGGCGGTGCCGGGATCAACAAATGAAATTGTaGCGGGAAGTCCTGGCCCTTGGCCCAACCTCCTGCTGTCCCCGG +
Preference number: 5 (lower is better)
Translates to: LHKVPWRCRDQQMKL*REVLALGPTSCCPR
Trigger: CCGGGGACAGCAGGAGGTTGGGCCAAGGGCCAGGACTTCCCGTCACAATTTCATTTGTTGATCCCGGCACCGCCAGGGGACTTTGTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS CCA 90 bp AACCAGGTGGCCTTATACCTCTGTGTGGCCCCACATGGGAAGGCCTaGTGGCTGGTCGCTCACCTGGTTCTTGTAGCCCTTGTCGACACC +
Preference number: 5 (lower is better)
Translates to: NQVALYLCVAPHGKA*WLVAHLVLVALVDT
Trigger: GGTGTCGACAAGGGCTACAAGAACCAGGTGAGCGACCAGCCACCAGGCCTTCCCATGTGGGGCCACACAGAGGTATAAGGCCACCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468170.1
ENST00000490810.1
CDS-3UTR CAA 90 bp CACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTTTCTCCACCAGCACCTaGCAGGCCTTTGCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: HCRDWTSCGRSWSQGLGSFSTST*QAFACA
Trigger: TGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAA...AGACCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CAA 90 bp ACAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGTGAAGCAGCAGTACTaGACAGGGCTGGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: TRALSGLDFLWAQLESRLVKQQY*TGLEHR
Trigger: CCTGTGCTCCAGCCCTGTCAAGTACTGCTGCTTCAC...AAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCCTCAGCCCTGGGGGATaGGGGTCAGCTATGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALLSPGG*GSAMLS
Trigger: AGACAGCATAGCTGACCCCAATCCCCCAGGGCTGAG...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACCTCAGCCCTGGGGGATaGGGGTCAGCTATGCTGTCT +
Preference number: 5 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDLSPGG*GSAMLS
Trigger: AGACAGCATAGCTGACCCCAATCCCCCAGGGCTGAG...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGGGTGTGAAGACCAGGTaGGGTGGGCAGCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRGVKTR*GGQLQA
Trigger: AGCCTGCAGCTGCCCACCCAACCTGGTCTTCACACC...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp AAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGGTTGAGAAGCAATTaGGCTGGGTGGTCTCACTGC +
Preference number: 5 (lower is better)
Translates to: KGTVGTGLPVGAAGVKAWGLRSN*AGWSHC
Trigger: GCAGTGAGACCACCCAGCCAAATTGCTTCTCAACCC...CCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTACCCTCTCTGGCTCTTaGCCGGCCCCAAGGGTCGTT +
Preference number: 5 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASTLSGS*PAPRVV
Trigger: AACGACCCTTGGGGCCGGCAAAGAGCCAGAGAGGGT...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS-3UTR CAA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACCGTCCAGCCTGTCCTaGGTGTGGGGTGCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: CGLWGDHCHGSGSKATRAPSSLS*VWGAWK
Trigger: CTTCCAAGCACCCCACACCAAGGACAGGCTGGACGG...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS CCA 90 bp TTCCCTCTTCCAACTACTGGAACCAGGTGGCCTTATACCTCTGTGTaGCCCCACATGGGAAGGCCTGGTGGCTGGTCGCTCACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: FPLPTTGTRWPYTSV*PHMGRPGGWSLTWF
Trigger: GAACCAGGTGAGCGACCAGCCACCAGGCCTTCCCATGTGGGGCCACACAGAGGTATAAGGCCACCTGGTTCCAGTAGTTGGAAGAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468170.1
ENST00000490810.1
CDS-3UTR CAA 90 bp ACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCTTCTCCACCAGCACCTaGCAGGCCTTTGCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: TALADKAAVPVSEFLGLCFSTST*QAFACA
Trigger: TGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAA...GCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCATGAGCCACAGAAACTaGGGCCCATGGGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: WAAVGVMCCGQKSLMSRLMSHRN*GPWVGR
Trigger: CCTGCCTACCCATGGGCCCAAGTTTCTGTGGCTCAT...GAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGGGTCTCTGAAAAAGAACTaGAGCTGGCTAACTGCCCTG +
Preference number: 5 (lower is better)
Translates to: GHCRDWTSCGRSWSQGLGSLKKN*SWLTAL
Trigger: CAGGGCAGTTAGCCAGCTCAAGTTCTTTTTCAGAGA...CCCCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGACCGTCCAGCCTGTCCTaGGTGTGGGGTGCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: GGIINHWAQGHMQHFQERPSSLS*VWGAWK
Trigger: CTTCCAAGCACCCCACACCAAGGACAGGCTGGACGG...TCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS GCA 90 bp TCACGCCAAAGTGGTGCATCAGGTAGGCCAGGTCGATGGTCCAGATaGTCCTGGTCAGCTGCAGCTTCTGCAGGGCTCTCTCAAACTCAC +
Preference number: 5 (lower is better)
Translates to: SRQSGASGRPGRWSR*SWSAAASAGLSQTH
Trigger: GTGAGTTTGAGAGAGCCCTGCAGAAGCTGCAGCTGACCAGGAGCATCTGGACCATCGACCTGGCCTACCTGATGCACCACTTTGGCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398245.8
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000407973.2
ENST00000435822.6
ENST00000447813.6
ENST00000468170.1
ENST00000490810.1
ENST00000621833.4
CDS-3UTR CAA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGTTCTCCACCAGCACCTaGCAGGCCTTTGCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMFSTST*QAFACA
Trigger: TGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAA...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATTCTCCACCAGCACCTaGCAGGCCTTTGCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARFSTST*QAFACA
Trigger: TGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAA...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCTTTCTCCACCAGCACCTaGCAGGCCTTTGCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: SSTTGHRGICSTSRREGPFSTST*QAFACA
Trigger: TGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAA...AGGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp ACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGTGAAGCAGCAGTACTaGACAGGGCTGGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: TGRQSSCASLRVPGTLPDVKQQY*TGLEHR
Trigger: CCTGTGCTCCAGCCCTGTCAAGTACTGCTGCTTCAC...ATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGTGAAGCAGCAGTACTaGACAGGGCTGGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: GDHCHGSGSKATRALSGLVKQQY*TGLEHR
Trigger: CCTGTGCTCCAGCCCTGTCAAGTACTGCTGCTTCAC...CAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCAGTGAAGCAGCAGTACTaGACAGGGCTGGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAVKQQY*TGLEHR
Trigger: CCTGTGCTCCAGCCCTGTCAAGTACTGCTGCTTCAC...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCATCAAGGCTTGGGGTCTaGGGGTATGCTTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAASRLGV*GYASSS
Trigger: GCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTGA...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGGGTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTTCAAGGCTTGGGGTCTaGGGGTATGCTTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GVSDMTTHGTGRQSSCASSRLGV*GYASSS
Trigger: GCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTGA...ACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GTAGGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCAATGAGCCACAGAAACTaGGGCCCATGGGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VGRWWWYHQPLGTGAYAAMSHRN*GPWVGR
Trigger: CCTGCCTACCCATGGGCCCAAGTTTCTGTGGCTCAT...TGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TCAGTCCTGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACATGAGCCACAGAAACTaGGGCCCATGGGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SVLRSVGRPLPWIWLKGNMSHRN*GPWVGR
Trigger: CCTGCCTACCCATGGGCCCAAGTTTCTGTGGCTCAT...GTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCAGGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCATGAGCCACAGAAACTaGGGCCCATGGGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVMSHRN*GPWVGR
Trigger: CCTGCCTACCCATGGGCCCAAGTTTCTGTGGCTCAT...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCACCATGCCATGCCTaGGGCATTGGAAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: QHVNRLGSCRCHVLWAKVPPCHA*GIGRAG
Trigger: TCCTGCTCTTCCAATGCCCAAGGCATGGCATGGTGG...GACTTTTGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS GCA 90 bp TCCCAAATCCTGCCTATAGCCTCTCTGCTGCTGCTCCCTGGTCTCTaGACACCTGGGTATCTACCTGGGTGTCTAGCCCTTGACTGTTCC +
Preference number: 5 (lower is better)
Translates to: SQILPIASLLLLPGL*TPGYLPGCLALDCS
Trigger: GGAACAGTCAAGGGCTAGACACCCAGGTAGATACCCAGGTGTGCAGAGACCAGGGAGCAGCAGCAGAGAGGCTATAGGCAGGATTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468170.1
CDS-3UTR CAA 90 bp CTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATGGCACCTTGCAGGCCTTaGCTTGTGCAAACAGCTGAT +
Preference number: 5 (lower is better)
Translates to: LADKAAVPVSEFLGLCQMAPCRP*LVQTAD
Trigger: ATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGC...CATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCTGCACCTTGCAGGCCTTaGCTTGTGCAAACAGCTGAT +
Preference number: 5 (lower is better)
Translates to: SSTTGHRGICSTSRREGPAPCRP*LVQTAD
Trigger: ATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGC...AGGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCATTCTCCACCAGCACCTaGCAGGCCTTTGCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: CGLWGDHCHGSGSKATRAFSTST*QAFACA
Trigger: TGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAA...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGTCAAGGCTTGGGGTCTaGGGGTATGCTTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WYHQPLGTGAYAALPGERSRLGV*GYASSS
Trigger: GCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTGA...CCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGTGGGGAGACCATaGCCATGGATCTGGCTCAAA +
Preference number: 5 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDSVGRP*PWIWLK
Trigger: TTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGA...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGGGGTTGAGAAGCAATTaGGCTGGGTGGTCTCACTGC +
Preference number: 5 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRGLRSN*AGWSHC
Trigger: GCAGTGAGACCACCCAGCCAAATTGCTTCTCAACCC...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGGCAGCTGTTTATTCCCAGAGCACTGCTGCCAGCCACGAGGCCTACCAGTGGGTCTTGGCCAAAGGCTTaGTCTAGGGTTGAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: GQLFIPRALLPATRPTSGSWPKA*SRVEKQ
Trigger: TTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGA...CCCACTGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAATAAACAGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGCAGGTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTGCACCTTGCAGGCCTTaGCTTGTGCAAACAGCTGAT +
Preference number: 5 (lower is better)
Translates to: GRWWWYHQPLGTGAYAALAPCRP*LVQTAD
Trigger: ATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGC...AAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TGCGGTCTGTGGGGAGACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCATCTGTGGGGAGACCATaGCCATGGATCTGGCTCAAA +
Preference number: 5 (lower is better)
Translates to: CGLWGDHCHGSGSKATRASVGRP*PWIWLK
Trigger: TTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGA...TGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGACCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGTCCCCAGCATGTGAACAGGCTGGGCAGCTGTCGGTGTCATGTGCTGTGGGCAATCACTGTTGCCCCTTaGAAAATGACCCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: GPQHVNRLGSCRCHVLWAITVAP*KMTHFP
Trigger: TGGGAAATGGGTCATTTTCAAAGGGGCAACAGTGAT...TGCCCACAGCACATGACACCGACAGCTGCCCAGCCTGTTCACATGCTGGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCAAGGTGACCTTTAACTaGTGGCATGCCCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALKVTFN*WHALRS
Trigger: GCTTCTCAGGGCATGCCACAAGTTAAAGGTCACCTT...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp AACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACAAGGTGACCTTTAACTaGTGGCATGCCCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: NTRHWQTKQLCQSPSSWDKVTFN*WHALRS
Trigger: GCTTCTCAGGGCATGCCACAAGTTAAAGGTCACCTT...GTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp ATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGCACCTTGCAGGCCTTaGCTTGTGCAAACAGCTGAT +
Preference number: 5 (lower is better)
Translates to: MTTHGTGRQSSCASLRVPAPCRP*LVQTAD
Trigger: ATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGC...AGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000447813.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTTCAGGTTCAAGGCTTGGGGTCTaGGGGTATGCTTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: FIPVARMNKAQLSHMASGSRLGV*GYASSS
Trigger: GCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTGA...ACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GTGAGTGACATGACAACACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCTCTGTGGGGAGACCATaGCCATGGATCTGGCTCAAA +
Preference number: 5 (lower is better)
Translates to: VSDMTTHGTGRQSSCASLSVGRP*PWIWLK
Trigger: TTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGA...GAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGTGTTGTCATGTCACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GAAGCCATCCTCTGGGACCAGAGACTGAGTGTTTCTAAACATTTTGGCTGGACTGGTGTGAAGACCAGGTaGGGTGGGCAGCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: EAILWDQRLSVSKHFGWTGVKTR*GGQLQA
Trigger: AGCCTGCAGCTGCCCACCCAACCTGGTCTTCACACC...AGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTCCCAGAGGATGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGGCCTTCTCTGAAAAAGAACTaGAGCTGGCTAACTGCCCTG +
Preference number: 5 (lower is better)
Translates to: SSTTGHRGICSTSRREGPSLKKN*SWLTAL
Trigger: CAGGGCAGTTAGCCAGCTCAAGTTCTTTTTCAGAGA...AGGCCCCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp ATCCCTTTCATCCCCGTGGCTAGAATGAACAAAGCCCAACTGTCCCACATGGCTCCACCATGCCATGCCTaGGGCATTGGAAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: IPFIPVARMNKAQLSHMAPPCHA*GIGRAG
Trigger: TCCTGCTCTTCCAATGCCCAAGGCATGGCATGGTGG...AGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCACGGGGATGAAAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp ACAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGTGTTTCTAAACATTTaGGCTGGACTGAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: TRALSGLDFLWAQLESRLVFLNI*AGLRCC
Trigger: ACAGCACCTCAGTCCAGCCAAAATGTTTAGAAACAC...AAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CAAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGCTCCATTTTCATGACTaGTGCAAGAATGCAACACAG +
Preference number: 5 (lower is better)
Translates to: QGHCRDWTSCGRSWSQGLLHFHD*CKNATQ
Trigger: CTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAG...CAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp ACACGGCACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTAGAGCTCTATGCTACTaGCTGTGTTGTAAGATCCTG +
Preference number: 5 (lower is better)
Translates to: TRHWQTKQLCQSPSSWDSRALCY*LCCKIL
Trigger: CAGGATCTTACAACACAGCAAGTAGCATAGAGCTCT...AGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGAAGAGCTCTATGCTACTaGCTGTGTTGTAAGATCCTG +
Preference number: 5 (lower is better)
Translates to: HWQTKQLCQSPSSWDSARRALCY*LCCKIL
Trigger: CAGGATCTTACAACACAGCAAGTAGCATAGAGCTCT...TCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GACCATTGCCATGGATCTGGCTCAAAGGCAACAAGGGCACTGTCGGGACTGGACTCTCTGAAAAAGAACTaGAGCTGGCTAACTGCCCTG +
Preference number: 5 (lower is better)
Translates to: DHCHGSGSKATRALSGLDSLKKN*SWLTAL
Trigger: CAGGGCAGTTAGCCAGCTCAAGTTCTTTTTCAGAGA...GTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCGTGTTTCTAAACATTTaGGCTGGACTGAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALVFLNI*AGLRCC
Trigger: ACAGCACCTCAGTCCAGCCAAAATGTTTAGAAACAC...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGAAGGTGACCTTTAACTaGTGGCATGCCCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: WYHQPLGTGAYAALPGERKVTFN*WHALRS
Trigger: GCTTCTCAGGGCATGCCACAAGTTAAAGGTCACCTT...CCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp AAGGGCACTGTCGGGACTGGACTTCCTGTGGGCGCAGCTGGAGTCAAGGCTTGGCTATTACTGTTTTACTaGAAGGTGATTACCCCTCAA +
Preference number: 5 (lower is better)
Translates to: KGTVGTGLPVGAAGVKAWLLLFY*KVITPQ
Trigger: TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAG...CCAAGCCTTGACTCCAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GTGGTGGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGATCACTGTTGCCCCTTaGAAAATGACCCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: VVVVSSTTGHRGICSTSRITVAP*KMTHFP
Trigger: TGGGAAATGGGTCATTTTCAAAGGGGCAACAGTGAT...CCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGCAGCTGTCGGTGTCATGTGCTGTGGGCAAAAGTCCCTGATGTCCAGGCTCTCCTCCATTTTCATGACTaGTGCAAGAATGCAACACAG +
Preference number: 5 (lower is better)
Translates to: GSCRCHVLWAKVPDVQALLHFHD*CKNATQ
Trigger: CTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAG...GAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGGTGTTTCTAAACATTTaGGCTGGACTGAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: WYHQPLGTGAYAALPGERVFLNI*AGLRCC
Trigger: ACAGCACCTCAGTCCAGCCAAAATGTTTAGAAACAC...CCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp ACTGGCAGACAAAGCAGCTGTGCCAGTCTCCGAGTTCCTGGGACTCTGCCAGATCTCCATTTTCATGACTaGTGCAAGAATGCAACACAG +
Preference number: 5 (lower is better)
Translates to: TGRQSSCASLRVPGTLPDLHFHD*CKNATQ
Trigger: CTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAG...ATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGCCACTCCCTAGTGACAGCCCTAACAGCATGTGCACTGTCTAAATCACATCCCGTGTTTCTAAACATTTaGGCTGGACTGAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: GHSLVTALTACALSKSHPVFLNI*AGLRCC
Trigger: ACAGCACCTCAGTCCAGCCAAAATGTTTAGAAACAC...GGGATGTGATTTAGACAGTGCACATGCTGTTAGGGCTGTCACTAGGGAGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp GGTGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGACTCCATTTTCATGACTaGTGCAAGAATGCAACACAG +
Preference number: 5 (lower is better)
Translates to: GGIINHWAQGHMQHFQERLHFHD*CKNATQ
Trigger: CTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAG...TCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CCCACCATCCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTGCACCTTGCAGGCCTTaGCTTGTGCAAACAGCTGAT +
Preference number: 5 (lower is better)
Translates to: PTILKTSFPPTGFLHTAIAPCRP*LVQTAD
Trigger: ATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGC...AATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGGATGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CCCACCATCCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTTCTGTGGGGAGACCATaGCCATGGATCTGGCTCAAA +
Preference number: 5 (lower is better)
Translates to: PTILKTSFPPTGFLHTAISVGRP*PWIWLK
Trigger: TTTGAGCCAGATCCATGGCAATGGTCTCCCCACAGA...AATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGGATGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TGGTATCATCAACCACTGGGCACAGGGGCATATGCAGCACTTCCAGGAGAGAGGCTATTACTGTTTTACTaGAAGGTGATTACCCCTCAA +
Preference number: 5 (lower is better)
Translates to: WYHQPLGTGAYAALPGERLLLFY*KVITPQ
Trigger: TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAG...CCTCTCTCCTGGAAGTGCTGCATATGCCCCTGTGCCCAGTGGTTGATGATACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCTCTTGGCCAAAGGCTTaGTCTAGGGTTGAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: QALWLHFHDLCKNATQCVSWPKA*SRVEKQ
Trigger: TTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGA...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCAGAGCTCTATGCTACTaGCTGTGTTGTAAGATCCTG +
Preference number: 5 (lower is better)
Translates to: QALWLHFHDLCKNATQCVRALCY*LCCKIL
Trigger: CAGGATCTTACAACACAGCAAGTAGCATAGAGCTCT...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAACACCACCTGAAGATGTGAAGCAGCAGTACTaGACAGGGCTGGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: WFPSYSYSNNFTRTPPEDVKQQY*TGLEHR
Trigger: CCTGTGCTCCAGCCCTGTCAAGTACTGCTGCTTCAC...ATCTTCAGGTGGTGTTCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CCCACCATCCTGAAAACTTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTTCTTGGCCAAAGGCTTaGTCTAGGGTTGAGAAGCAA +
Preference number: 5 (lower is better)
Translates to: PTILKTSFPPTGFLHTAISWPKA*SRVEKQ
Trigger: TTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGA...AATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAAGTTTTCAGGATGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGATTCTCCACCAGCACCTaGCAGGCCTTTGCTTGTGCA +
Preference number: 5 (lower is better)
Translates to: FISSHWFPSYSYSNNFTRFSTST*QAFACA
Trigger: TGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAA...TCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp CAGGCTCTCTGGCTCCATTTTCATGACTTGTGCAAGAATGCAACACAGTGTGTCCTATTACTGTTTTACTaGAAGGTGATTACCCCTCAA +
Preference number: 5 (lower is better)
Translates to: QALWLHFHDLCKNATQCVLLLFY*KVITPQ
Trigger: TTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAG...GACACACTGTGTTGCATTCTTGCACAAGTCATGAAAATGGAGCCAGAGAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TTCATTTCCTCCCACTGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGACTTGCAGGCCTTTGCTaGTGCAAACAGCTGATTCAC +
Preference number: 5 (lower is better)
Translates to: FISSHWFPSYSYSNNFTRLAGLC*CKQLIH
Trigger: GTGAATCAGCTGTTTGCACAAGCAAAGGCCTGCAAG...TCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCAGTGGGAGGAAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS-3UTR CAA 90 bp TGGTTTCCTTCATACAGCTATTCTAACAATTTTACCAGAACACCACCTGAAGATATCACTGTTGCCCCTTaGAAAATGACCCATTTCCCA +
Preference number: 5 (lower is better)
Translates to: WFPSYSYSNNFTRTPPEDITVAP*KMTHFP
Trigger: TGGGAAATGGGTCATTTTCAAAGGGGCAACAGTGAT...ATCTTCAGGTGGTGTTCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407471.7
ENST00000435822.6
ENST00000621833.4
CDS GCA 72 bp CAGCTTCCGCTTCGGCTGGGGCGGGAGGGCGGTCGGTaGGTGTCGAGTTCCTTCTCCGCCACCGCCGCCGCT +
Preference number: 6 (lower is better)
Translates to: QLPLRLGREGGR*VSSSFSATAAA
Trigger: AGCGGCGGCGGTGGCGGAGAAGGAACTCGACACGCACCGACCGCCCTCCCGCCCCAGCCGAAGCGGAAGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398245.8
ENST00000402766.5
ENST00000407471.7
ENST00000407973.2
ENST00000435822.6
ENST00000468170.1
CDS CCA 72 bp CCCCGGCCCAGAGCGGGCTACAGCTTCCGCTTCGGCTaGGGCGGGAGGGCGGTCGGTGCGTGTCGAGTTCCT +
Preference number: 6 (lower is better)
Translates to: PRPRAGYSFRFG*GGRAVGACRVP
Trigger: AGGAACTCGACACGCACCGACCGCCCTCCCGCCCCAGCCGAAGCGGAAGCTGTAGCCCGCTCTGGGCCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000398245.8
ENST00000402766.5
ENST00000407471.7
ENST00000407973.2
ENST00000435822.6
ENST00000468170.1
CDS CAA 72 bp CCAGTGGTAGAGCTGCTGGATGACGGGCACAGGCAGTaGCACAAAGTCCCCGGGCTCGAGCGGCGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: PVVELLDDGHRQ*HKVPGLERRPR
Trigger: GCGGGGCCGCCGCTCGAGCCCGGGGACTTTGTGCAACTGCCTGTGCCCGTCATCCAGCAGCTCTACCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000398245.8
ENST00000402766.5
ENST00000407471.7
ENST00000407973.2
ENST00000435822.6
ENST00000447813.6
ENST00000468170.1
CDS CCA 72 bp TTGGTGTGGGGTGCTTGGAAGTGTGAGCACCCTCTCTaGCTCTTTGCCGGCCCCAAGGGTCGTTGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: LVWGAWKCEHPL*LFAGPKGRCGG
Trigger: GCCGCCGCAACGACCCTTGGGGCCGGCAAAGAGCCAGAGAGGGTGCTCACACTTCCAAGCACCCCACACCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404664.7
ENST00000407973.2
ENST00000621833.4
CDS CCA 72 bp AGCCCCGCGTCTCCGCCTTGCCGTCCAGCCTGTCCTTaGTGTGGGGTGCTTGGAAGTGTGAGCACCCTCTCT +
Preference number: 6 (lower is better)
Translates to: SPASPPCRPACP*CGVLGSVSTLS
Trigger: AGAGAGGGTGCTCACACTTCCAAGCACCCCACACCAAGGACAGGCTGGACGGCAAGGCGGAGACGCGGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404664.7
ENST00000407973.2
ENST00000621833.4
CDS CAA 72 bp AAGCCCCGCGTCTCCGCCTTGCCGTCCAGCCTGTCCTaGGTGTGGGGTGCTTGGAAGTGTGAGCACCCTCTC +
Preference number: 6 (lower is better)
Translates to: KPRVSALPSSLS*VWGAWKCEHPL
Trigger: GAGAGGGTGCTCACACTTCCAAGCACCCCACACCAAGGACAGGCTGGACGGCAAGGCGGAGACGCGGGGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404664.7
ENST00000407973.2
ENST00000621833.4
CDS TCA 72 bp TGCAGCCAGTGGCCCGGTTGTAGCCACGCAGCACGATaGAGTGGCCCTGGTAGTCAGGAGTGCGGCAGAAGC +
Preference number: 6 (lower is better)
Translates to: CSQWPGCSHAAR*SGPGSQECGRS
Trigger: GCTTCTGCCGCACTCCTGACTACCAGGGCCACTTCATCGTGCTGCGTGGCTACAACCGGGCCACTGGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398245.8
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000493099.1
ENST00000621833.4
CDS TCA 72 bp GTCCAGCCTGTCCTTGGTGTGGGGTGCTTGGAAGTGTaGGCACCCTCTCTGGCTCTTTGCCGGCCCCAAGGG +
Preference number: 6 (lower is better)
Translates to: VQPVLGVGCLEV*APSLALCRPQG
Trigger: CCCTTGGGGCCGGCAAAGAGCCAGAGAGGGTGCTCACACTTCCAAGCACCCCACACCAAGGACAGGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404664.7
ENST00000407973.2
ENST00000621833.4
CDS TCA 72 bp CGGGAGGCGGCGGCTGGCGGTGCCGGGATCAACAAATaGAATTGTGACGGGAAGTCCTGGCCCTTGGCCCAA +
Preference number: 6 (lower is better)
Translates to: REAAAGGAGINK*NCDGKSWPLAQ
Trigger: TTGGGCCAAGGGCCAGGACTTCCCGTCACAATTTCATTTGTTGATCCCGGCACCGCCAGCCGCCGCCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407973.2
CDS GCA 72 bp CGGCCCCCGGGCCCAGTCATCAGCCCTCTTTTCCGGTaGCGGAACTATCGTACTGGTGCCCTAGTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: RPPGPVISPLFR*RNYRTGALVSQ
Trigger: CTGGGAAACTAGGGCACCAGTACGATAGTTCCGGCACCGGAAAAGAGGGCTGATGACTGGGCCCGGGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS CCA 72 bp GCCTTGCCGTCCAGCCTGTCCTTGGTGTGGGGTGCTTaGAAGTGTGAGCACCCTCTCTGGCTCTTTGCCGGC +
Preference number: 6 (lower is better)
Translates to: ALPSSLSLVWGA*KCEHPLWLFAG
Trigger: GCCGGCAAAGAGCCAGAGAGGGTGCTCACACTTCCAAGCACCCCACACCAAGGACAGGCTGGACGGCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404664.7
ENST00000407973.2
ENST00000621833.4
CDS CAA 90 bp GTGCGGCAGAAGCAGTGGTGGCCACTGGGGGTGAAGCAGCAGTACTaGACAGGGCTGGAGCACAGGTCACAGTGCAGCACCCCCGAGTTC +
Preference number: 6 (lower is better)
Translates to: VRQKQWWPLGVKQQY*TGLEHRSQCSTPEF
Trigger: GAACTCGGGGGTGCTGCACTGTGACCTGTGCTCCAGCCCTGTCAAGTACTGCTGCTTCACCCCCAGTGGCCACCACTGCTTCTGCCGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000398245.8
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000493099.1
ENST00000621833.4
CDS TCA 72 bp GGCGGCTGGCGGTGCCGGGATCAACAAATGAAATTGTaGCGGGAAGTCCTGGCCCTTGGCCCAACCTCCTGC +
Preference number: 6 (lower is better)
Translates to: GGWRCRDQQMKL*REVLALGPTSC
Trigger: GCAGGAGGTTGGGCCAAGGGCCAGGACTTCCCGTCACAATTTCATTTGTTGATCCCGGCACCGCCAGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407973.2
CDS GCA 72 bp CAGCCCTCTTTTCCGGTGCCGGAACTATCGTACTGGTaGCCTAGTTTCCCAGCCGGCAGGCGGAGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: QPSFPVPELSYW*PSFPAGRRSEE
Trigger: CTCCTCACTCCGCCTGCCGGCTGGGAAACTAGGGCACCAGTACGATAGTTCCGGCACCGGAAAAGAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS TCA 72 bp GTCCCCTGGCGGTGCCGGGATCAACAAATGAAATTGTaGCGGGAAGTCCTGGCCCTTGGCCCAACCTCCTGC +
Preference number: 6 (lower is better)
Translates to: VPWRCRDQQMKL*REVLALGPTSC
Trigger: GCAGGAGGTTGGGCCAAGGGCCAGGACTTCCCGTCACAATTTCATTTGTTGATCCCGGCACCGCCAGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS CCA 72 bp CATCAGCCCTCTTTTCCGGTGCCGGAACTATCGTACTaGTGCCCTAGTTTCCCAGCCGGCAGGCGGAGTGAG +
Preference number: 6 (lower is better)
Translates to: HQPSFPVPELSY*CPSFPAGRRSE
Trigger: CTCACTCCGCCTGCCGGCTGGGAAACTAGGGCACCAGTACGATAGTTCCGGCACCGGAAAAGAGGGCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS CCA 72 bp GAACCAGGTGGCCTTATACCTCTGTGTGGCCCCACATaGGAAGGCCTGGTGGCTGGTCGCTCACCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: EPGGLIPLCGPT*EGLVAGRSPGS
Trigger: AGAACCAGGTGAGCGACCAGCCACCAGGCCTTCCCATGTGGGGCCACACAGAGGTATAAGGCCACCTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468170.1
ENST00000490810.1
CDS CCA 72 bp CCAACTACTGGAACCAGGTGGCCTTATACCTCTGTGTaGCCCCACATGGGAAGGCCTGGTGGCTGGTCGCTC +
Preference number: 6 (lower is better)
Translates to: PTTGTRWPYTSV*PHMGRPGGWSL
Trigger: GAGCGACCAGCCACCAGGCCTTCCCATGTGGGGCCACACAGAGGTATAAGGCCACCTGGTTCCAGTAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468170.1
ENST00000490810.1
CDS CAA 72 bp CCAGTGGTAGAGCTGCTGGATGACGGGCACAGGCAGTaGCACAAAGTCCCCTGGCGGTGCCGGGATCAACAA +
Preference number: 6 (lower is better)
Translates to: PVVELLDDGHRQ*HKVPWRCRDQQ
Trigger: TTGTTGATCCCGGCACCGCCAGGGGACTTTGTGCAACTGCCTGTGCCCGTCATCCAGCAGCTCTACCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS CAA 72 bp GGCTCAGGTCAGCTCTCTGGGGAGGATCGATCACCCTaGGGCTTGTACACTCTGGCAGGCATGAGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: GSGQLSGEDRSP*GLYTLAGMSRS
Trigger: GCTCCTGCTCATGCCTGCCAGAGTGTACAAGCCCAAGGGTGATCGATCCTCCCCAGAGAGCTGACCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480272.1
CDS GCA 72 bp AGTGGTGCATCAGGTAGGCCAGGTCGATGGTCCAGATaGTCCTGGTCAGCTGCAGCTTCTGCAGGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: SGASGRPGRWSR*SWSAAASAGLS
Trigger: AGAGAGCCCTGCAGAAGCTGCAGCTGACCAGGAGCATCTGGACCATCGACCTGGCCTACCTGATGCACCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000398245.8
ENST00000402766.5
ENST00000404664.7
ENST00000407471.7
ENST00000407973.2
ENST00000435822.6
ENST00000447813.6
ENST00000468170.1
ENST00000490810.1
ENST00000621833.4
CDS GCA 72 bp TTCCTGGGTCGGCATAGGCTGGGTTGTTGTAGAAGATaGAGCCAGTGGCCCGGTTGTAGCCACGCAGCACGA +
Preference number: 6 (lower is better)
Translates to: FLGRHRLGCCRR*SQWPGCSHAAR
Trigger: TCGTGCTGCGTGGCTACAACCGGGCCACTGGCTGCATCTTCTACAACAACCCAGCCTATGCCGACCCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407471.7
ENST00000621833.4
CDS GCA 72 bp GGCAGAGGAGCCCCACCTGCCAGGGCAGACGGTACATaGAGCAAGCCAGATCAGAAAGCTGTCTGTCCTAAG +
Preference number: 6 (lower is better)
Translates to: GRGAPPARADGT*SKPDQKAVCPK
Trigger: CTTAGGACAGACAGCTTTCTGATCTGGCTTGCTGCATGTACCGTCTGCCCTGGCAGGTGGGGCTCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480272.1
CDS CCA 72 bp GCCTTATACCTCTGTGTGGCCCCACATGGGAAGGCCTaGTGGCTGGTCGCTCACCTGGTTCTTGTAGCCCTT +
Preference number: 6 (lower is better)
Translates to: ALYLCVAPHGKA*WLVAHLVLVAL
Trigger: AAGGGCTACAAGAACCAGGTGAGCGACCAGCCACCAGGCCTTCCCATGTGGGGCCACACAGAGGTATAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468170.1
ENST00000490810.1
CDS GCA 72 bp ACATTCGGTCGGCATAGGCTGGGTTGTTGTAGAAGATaGAGCCAGTGGCCCGGTTGTAGCCACGCAGCACGA +
Preference number: 6 (lower is better)
Translates to: TFGRHRLGCCRR*SQWPGCSHAAR
Trigger: TCGTGCTGCGTGGCTACAACCGGGCCACTGGCTGCATCTTCTACAACAACCCAGCCTATGCCGACCGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398245.8
ENST00000404664.7
ENST00000435822.6
ENST00000493099.1
CDS GCA 72 bp CTGCCTATAGCCTCTCTGCTGCTGCTCCCTGGTCTCTaGACACCTGGGTATCTACCTGGGTGTCTAGCCCTT +
Preference number: 6 (lower is better)
Translates to: LPIASLLLLPGL*TPGYLPGCLAL
Trigger: AAGGGCTAGACACCCAGGTAGATACCCAGGTGTGCAGAGACCAGGGAGCAGCAGCAGAGAGGCTATAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468170.1
CDS TCA 72 bp TGCACAAAGTCCCCTGGCGGTGCCGGGATCAACAAATaGAATTGTGACGGGAAGTCCTGGCCCTTGGCCCAA +
Preference number: 6 (lower is better)
Translates to: CTKSPGGAGINK*NCDGKSWPLAQ
Trigger: TTGGGCCAAGGGCCAGGACTTCCCGTCACAATTTCATTTGTTGATCCCGGCACCGCCAGGGGACTTTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404664.7
ENST00000621833.4
CDS GCA 72 bp CACTGTGCATTTCTCCACCAGCACCTTGCAGGCCTTTaGTTGTGCAAACAGCTGATTCACCCGGGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: HCAFLHQHLAGL*LCKQLIHPGLF
Trigger: GAAGAGACCCGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAAATGCACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398245.8
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000480272.1
ENST00000621833.4
CDS CAA 72 bp CCTGCATTTCTCCACCAGCACCTTGCAGGCCTTTGCTaGTGCAAACAGCTGATTCACCCGGGTCTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: PAFLHQHLAGLC*CKQLIHPGLFC
Trigger: ACAGAAGAGACCCGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAAATGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402766.5
CDS GCA 72 bp CCTTCACACTCACTGTGCATTTCTCCACCAGCACCTTaGAGGCCTTTGCTTGTGCAAACAGCTGATTCACCC +
Preference number: 6 (lower is better)
Translates to: PSHSLCISPPAP*RPLLVQTADSP
Trigger: GGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAAATGCACAGTGAGTGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398245.8
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000480272.1
ENST00000621833.4
CDS GCA 72 bp CACATTCCATTTCTCCACCAGCACCTTGCAGGCCTTTaGTTGTGCAAACAGCTGATTCACCCGGGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: HIPFLHQHLAGL*LCKQLIHPGLF
Trigger: GAAGAGACCCGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAAATGGAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447813.6
CDS CAA 72 bp TGTGCATTTCTCCACCAGCACCTTGCAGGCCTTTGCTaGTGCAAACAGCTGATTCACCCGGGTCTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: CAFLHQHLAGLC*CKQLIHPGLFC
Trigger: ACAGAAGAGACCCGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAAATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398245.8
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000480272.1
ENST00000621833.4
CDS CAA 72 bp TCACTGTGCATTTCTCCACCAGCACCTTGCAGGCCTTaGCTTGTGCAAACAGCTGATTCACCCGGGTCTCTT +
Preference number: 6 (lower is better)
Translates to: SLCISPPAPCRP*LVQTADSPGSL
Trigger: AAGAGACCCGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAAATGCACAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000398245.8
ENST00000404664.7
ENST00000407471.7
ENST00000435822.6
ENST00000480272.1
ENST00000621833.4
CDS CAA 72 bp GCACATTCCATTTCTCCACCAGCACCTTGCAGGCCTTaGCTTGTGCAAACAGCTGATTCACCCGGGTCTCTT +
Preference number: 6 (lower is better)
Translates to: AHSISPPAPCRP*LVQTADSPGSL
Trigger: AAGAGACCCGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAAATGGAATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447813.6
CDS CAA 72 bp ATTCCATTTCTCCACCAGCACCTTGCAGGCCTTTGCTaGTGCAAACAGCTGATTCACCCGGGTCTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: IPFLHQHLAGLC*CKQLIHPGLFC
Trigger: ACAGAAGAGACCCGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGCAAGGTGCTGGTGGAGAAATGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447813.6