Pregenerated sensors for GTF2H2C (Homo sapiens)
Ensembl gene IDs: ENSG00000183474Ensembl transcript IDs: ENST00000380729.8, ENST00000503604.1, ENST00000505737.2, ENST00000510979.5, ENST00000511629.6
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACAAATTTCGGCCGGGCACGGTGGCGGAGGTGGGTGGATGACCTaGGGTCAGGAGTTGGAGATCAGCCTGATCAACAAGGTGAAACCC | + |
|
Preference number: 1 (lower is better) Translates to: SQISAGHGGGGGWMT*GQELEISLINKVKP Trigger: GGGTTTCACCTTGTTGATCAGGCTGATCTCCAACTCCTGACCTCAGGTCATCCACCCACCTCCGCCACCGTGCCCGGCCGAAATTTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380729.8 |
||
| 3UTR CCA 90 bp | GCGTACAAACAAAATACTTCATTTCCTGGCCACTTTGTTCATGGATaGGCAGATCGTAACTCAGGCCAATCAGAGTTCTCCCTAGACGTG | + |
|
Preference number: 1 (lower is better) Translates to: AYKQNTSFPGHFVHG*ADRNSGQSEFSLDV Trigger: CACGTCTAGGGAGAACTCTGATTGGCCTGAGTTACGATCTGCCCATCCATGAACAAAGTGGCCAGGAAATGAAGTATTTTGTTTGTACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511629.6 |
||
| 3UTR CCA 90 bp | ATCCTGCTTAGTTCATGTGGTGCTGACCCTACTTCTATCCTGCTCTaGGCATCAGCAGGCAATCGAAGCGTACAAACAAAATACTTCATT | + |
|
Preference number: 1 (lower is better) Translates to: ILLSSCGADPTSILL*ASAGNRSVQTKYFI Trigger: AATGAAGTATTTTGTTTGTACGCTTCGATTGCCTGCTGATGCCCAGAGCAGGATAGAAGTAGGGTCAGCACCACATGAACTAAGCAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511629.6 |
||
| 3UTR CAA 90 bp | AGGCAATCGAAGCGTACAAACAAAATACTTCATTTCCTGGCCACTTaGTTCATGGATGGGCAGATCGTAACTCAGGCCAATCAGAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RQSKRTNKILHFLAT*FMDGQIVTQANQSS Trigger: AGAACTCTGATTGGCCTGAGTTACGATCTGCCCATCCATGAACAAAGTGGCCAGGAAATGAAGTATTTTGTTTGTACGCTTCGATTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511629.6 |
||
| 3UTR-3UTR GCA 90 bp | TTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTTATCTACTCTAGGGTGGAGTaGAGTGGCACAATCTCGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FMELLRDIGSLMPVEDLIYSRVE*SGTISA Trigger: AGCCGAGATTGTGCCACTGCACTCCACCCTAGAGTA...GATAAGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| 3UTR-3UTR GCA 90 bp | GTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCAGTACATCATTTCATATGTTACTCTAGGGTGGAGTaGAGTGGCACAATCTCGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VKPKKTSLVDVAVHHFICYSRVE*SGTISA Trigger: AGCCGAGATTGTGCCACTGCACTCCACCCTAGAGTA...ACATATGAAATGATGTACTGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTTATCGCTAATGAGGACTGCTaGATGCTGTGCTGGCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FMELLRDIGSLMPVEDLIANEDC*MLCWQA Trigger: AGCCTGCCAGCACAGCATCAAGCAGTCCTCATTAGC...GATAAGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR CCA 90 bp | TTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTTATCTTCGGCCGGGCACGGTaGCGGAGGTGGGTGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: FMELLRDIGSLMPVEDLIFGRAR*RRWVDD Trigger: GTCATCCACCCACCTCCGCCACCGTGCCCGGCCGAA...GATAAGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380729.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTAGGCGGAGGTTGCAGTaGGCCAACAGCAGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CVYGIVKRYWFLDACGGSRRRLQ*ANSRPL Trigger: CAGTGGCCTGCTGTTGGCTCACTGCAACCTCCGCCT...AGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380729.8 |
||
| CDS-3UTR GCA 90 bp | ACATATTCCAGATGTTTGGTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCACCAACAGCAGGCCACTaGACTCCAGCCTGGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TYSRCLVKPKKTSLVDVAPTAGH*TPAWAM Trigger: CATCGCCCAGGCTGGAGTGCAGTGGCCTGCTGTTGG...TGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAACCAAACATCTGGAATATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380729.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTGCACGGTGGCGGAGGTaGGTGGATGACCTGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CVYGIVKRYWFLDACGGSARWRR*VDDLRS Trigger: TGACCTCAGGTCATCCACCCACCTCCGCCACCGTGC...AGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380729.8 |
||
| CDS-3UTR GCA 90 bp | ACATATTCCAGATGTTTGGTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCATCGCCCAGGCTGGAGTaGAGTGGAGCGATCTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TYSRCLVKPKKTSLVDVASPRLE*SGAISV Trigger: AACCGAGATCGCTCCACTGCACTCCAGCCTGGGCGA...TGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAACCAAACATCTGGAATATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380729.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTAGCCTTCCGAATAGCTaGGACTACAGGCGCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVYGIVKRYWFLDACGGSSLPNS*DYRRPP Trigger: TGGCGGGCGCCTGTAGTCCCAGCTATTCGGAAGGCT...AGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380729.8 |
||
| CDS-3UTR TCA 90 bp | GTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCAGTACATCATTTCATATGTGACAGGAGAATGGCTTaGGCCTGGGAGGCGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VKPKKTSLVDVAVHHFICDRRMA*AWEAEV Trigger: AACCTCCGCCTCCCAGGCTCAAGCCATTCTCCTGTC...ACATATGAAATGATGTACTGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380729.8 |
||
| CDS-3UTR TCA 90 bp | ACATATTCCAGATGTTTGGTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCAGGTGGGTGGATGACCTaGGGTCAGGAGTTGGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TYSRCLVKPKKTSLVDVAGGWMT*GQELEI Trigger: GATCTCCAACTCCTGACCTCAGGTCATCCACCCACC...TGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAACCAAACATCTGGAATATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380729.8 |
||
| CDS-3UTR GCA 90 bp | ACATATTCCAGATGTTTGGTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCACCAAGGTTGTGCCACTaGACTCCAGCCTTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TYSRCLVKPKKTSLVDVAPRLCH*TPAFLC Trigger: GCAGAGGAAGGCTGGAGTGCAGTGGCACAACCTTGG...TGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAACCAAACATCTGGAATATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380729.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTCTAATGAGGACTGCTTaGTGCTGTGCTGGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVYGIVKRYWFLDACGGSLMRTA*CCAGRL Trigger: CAGCCTGCCAGCACAGCATCAAGCAGTCCTCATTAG...AGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR TCA 90 bp | TGTGTTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTGGCAGGAGAATCACTTaGACCTGGGAGGTAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: CVYGIVKRYWFLDACGGSGRRIT*TWEVDT Trigger: AGTGTCTACCTCCCAGGTTCAAGTGATTCTCCTGCC...AGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380729.8 |
||
| CDS-3UTR TCA 90 bp | GTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCAGTACATCATTTCATATGTCTAATGAGGACTGCTTaGTGCTGTGCTGGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKPKKTSLVDVAVHHFICLMRTA*CCAGRL Trigger: CAGCCTGCCAGCACAGCATCAAGCAGTCCTCATTAG...ACATATGAAATGATGTACTGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR GCA 90 bp | ACATATTCCAGATGTTTGGTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCATACTCTAGGGTGGAGTaGAGTGGCACAATCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TYSRCLVKPKKTSLVDVAYSRVE*SGTISA Trigger: AGCCGAGATTGTGCCACTGCACTCCACCCTAGAGTA...TGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAACCAAACATCTGGAATATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR GCA 90 bp | ACATATTCCAGATGTTTGGTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCAGACTGCTTGATGCTGTaGTGGCAGGCTGTTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TYSRCLVKPKKTSLVDVADCLML*WQAVVS Trigger: AGAAACAACAGCCTGCCAGCACAGCATCAAGCAGTC...TGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAACCAAACATCTGGAATATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR GCA 90 bp | GTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCAGTACATCATTTCATATGTTTCACACCATTCTCCTaGCCCAGCCTTCCGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKPKKTSLVDVAVHHFICFTPFS*PSLPNS Trigger: GCTATTCGGAAGGCTGGGGCAGGAGAATGGTGTGAA...ACATATGAAATGATGTACTGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380729.8 |
||
| 3UTR CAA 72 bp | AAGCGTACAAACAAAATACTTCATTTCCTGGCCACTTaGTTCATGGATGGGCAGATCGTAACTCAGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KRTNKILHFLAT*FMDGQIVTQAN Trigger: ATTGGCCTGAGTTACGATCTGCCCATCCATGAACAAAGTGGCCAGGAAATGAAGTATTTTGTTTGTACGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511629.6 |
||
| CDS-3UTR GCA 90 bp | ACATATTCCAGATGTTTGGTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCAGTATTGCCATCCAAATaGGCCATGCTGAAAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TYSRCLVKPKKTSLVDVAVLPSK*AMLKEG Trigger: ACCCTCTTTCAGCATGGCGCATTTGGATGGCAATAC...TGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAACCAAACATCTGGAATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR GCA 90 bp | TTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTTATCGACTGCTTGATGCTGTaGTGGCAGGCTGTTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FMELLRDIGSLMPVEDLIDCLML*WQAVVS Trigger: AGAAACAACAGCCTGCCAGCACAGCATCAAGCAGTC...GATAAGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR TCA 90 bp | TGTGTTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTGAAGCAATGGTGTGCTaGGGAAATCCCATACGAATA | + |
|
Preference number: 4 (lower is better) Translates to: CVYGIVKRYWFLDACGGSEAMVC*GNPIRI Trigger: TATTCGTATGGGATTTCCTCAGCACACCATTGCTTC...AGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR GCA 90 bp | GTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCAGTACATCATTTCATATGTGTATTGCCATCCAAATaGGCCATGCTGAAAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VKPKKTSLVDVAVHHFICVLPSK*AMLKEG Trigger: ACCCTCTTTCAGCATGGCGCATTTGGATGGCAATAC...ACATATGAAATGATGTACTGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR GCA 90 bp | ACATATTCCAGATGTTTGGTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCAATTGTACTAGTGGACTaGTACAAGGACTTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TYSRCLVKPKKTSLVDVAIVLVD*YKDFHC Trigger: GCAGTGGAAGTCCTTGTAGCAGTCCACTAGTACAAT...TGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAACCAAACATCTGGAATATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTTTGACACATCCCTTGTaGATACCTGGAAGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CVYGIVKRYWFLDACGGSLTHPL*IPGSCV Trigger: AACACAGCTTCCAGGTATCCACAAGGGATGTGTCAA...AGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR TCA 90 bp | TTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTTATCGAAGCAATGGTGTGCTaGGGAAATCCCATACGAATA | + |
|
Preference number: 4 (lower is better) Translates to: FMELLRDIGSLMPVEDLIEAMVC*GNPIRI Trigger: TATTCGTATGGGATTTCCTCAGCACACCATTGCTTC...GATAAGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR GCA 90 bp | TTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTTATCATTGTACTAGTGGACTaGTACAAGGACTTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FMELLRDIGSLMPVEDLIIVLVD*YKDFHC Trigger: GCAGTGGAAGTCCTTGTAGCAGTCCACTAGTACAAT...GATAAGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR CCA 90 bp | ACATATTCCAGATGTTTGGTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCATCCCTTGTGGATACCTaGAAGCTGTGTTTATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TYSRCLVKPKKTSLVDVASLVDT*KLCLWN Trigger: ATTCCATAAACACAGCTTCCAGGTATCCACAAGGGA...TGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAACCAAACATCTGGAATATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTTCCCTTGTGGATACCTaGAAGCTGTGTTTATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CVYGIVKRYWFLDACGGSSLVDT*KLCLWN Trigger: ATTCCATAAACACAGCTTCCAGGTATCCACAAGGGA...AGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTATTGTTAAGAGATATTaGTTCCTTGATGCCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVYGIVKRYWFLDACGGSIVKRY*FLDACG Trigger: TCCACAGGCATCAAGGAACCAATATCTCTTAACAAT...AGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAACACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR TCA 90 bp | GTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCAGTACATCATTTCATATGTGAGAGTGAAAGGATTTaGATCTCACTTTCTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VKPKKTSLVDVAVHHFICESERI*ISLSVK Trigger: TTTGACAGAAAGTGAGATTCAAATCCTTTCACTCTC...ACATATGAAATGATGTACTGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR CCA 90 bp | GTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCAGTACATCATTTCATATGTATTGTTAAGAGATATTaGTTCCTTGATGCCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VKPKKTSLVDVAVHHFICIVKRY*FLDACG Trigger: TCCACAGGCATCAAGGAACCAATATCTCTTAACAAT...ACATATGAAATGATGTACTGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR CCA 90 bp | ACATATTCCAGATGTTTGGTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCATGCACTATAAATAAATaGAGTCTTCAAGCTTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TYSRCLVKPKKTSLVDVACTINK*SLQALG Trigger: GCCTAAAGCTTGAAGACTCCATTTATTTATAGTGCA...TGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAACCAAACATCTGGAATATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR GCA 90 bp | TTTATGGAATTGTTAAGAGATATTGGTTCCTTGATGCCTGTGGAGGATCTTATCGTATCTGGATTGGGATaGACTATAAATAAATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FMELLRDIGSLMPVEDLIVSGLG*TINKWS Trigger: ACTCCATTTATTTATAGTGCATCCCAATCCAGATAC...GATAAGATCCTCCACAGGCATCAAGGAACCAATATCTCTTAACAATTCCATAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS-3UTR CCA 90 bp | GTTAAACCTAAAAAGACCTCTCTGGTGGATGTAGCAGTACATCATTTCATATGTTGCACTATAAATAAATaGAGTCTTCAAGCTTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VKPKKTSLVDVAVHHFICCTINK*SLQALG Trigger: GCCTAAAGCTTGAAGACTCCATTTATTTATAGTGCA...ACATATGAAATGATGTACTGCTACATCCACCAGAGAGGTCTTTTTAGGTTTAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380729.8 ENST00000510979.5 |
||
| CDS GCA 72 bp | GGAGGTAGACACTGGAGCGAGCCAAGGTTGTGCCACTaGACTCCAGCCAAGCTATGTGAAACTGGCAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGRHWSEPRLCH*TPAKLCETGKG Trigger: ACCCTTGCCAGTTTCACATAGCTTGGCTGGAGTGCAGTGGCACAACCTTGGCTCGCTCCAGTGTCTACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505737.2 |
||
| CDS CAA 72 bp | TCCTTGTTTTTCAGGTATGGGATTCAGGCTCAGAGGTaGGTCACTTTCTCAAGCGGGTCACAAACTCGAACC | + |
|
Preference number: 6 (lower is better) Translates to: SLFFRYGIQAQR*VTFSSGSQTRT Trigger: GGTTCGAGTTTGTGACCCGCTTGAGAAAGTGACCAACCTCTGAGCCTGAATCCCATACCTGAAAAACAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505737.2 |
||
| CDS GCA 72 bp | TGTCCACACAAAGATTTGCATGTAAGTGTTCATGGCTaGATTTTCCTAACAGTCAAAAACTGTAAAGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: CPHKDLHVSVHG*IFLTVKNCKEP Trigger: AGGTTCTTTACAGTTTTTGACTGTTAGGAAAATGCAGCCATGAACACTTACATGCAAATCTTTGTGTGGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503604.1 |
||