Pregenerated sensors for GSTM5 (Homo sapiens)
Ensembl gene IDs: ENSG00000134201Ensembl transcript IDs: ENST00000256593.8, ENST00000369813.5, ENST00000429410.2, ENST00000483153.1, ENST00000492718.1, ENST00000648974.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGCGGGGAGGGATGATGTTAGAAGAAAGGAAGCCAATGAGGCCTTaGGGAAGAGAAGAGAGTAGAAAGAAGGAAAAAGGAAGAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: MRGGMMLEERKPMRP*GREESRKKEKGRRQ Trigger: CTGCCTTCTTCCTTTTTCCTTCTTTCTACTCTCTTCTCTTCCCCAAGGCCTCATTGGCTTCCTTTCTTCTAACATCATCCCTCCCCGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256593.8 ENST00000648974.1 |
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| 3UTR-3UTR TCA 90 bp | GTCTATCAGGACAGGGTGAAAGAAGGCAGTCTGCCTGGGAGCTGCTCAGCCCCCCTACAGGAGCGCGAATaGGTGAGGAACTTGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: VYQDRVKEGSLPGSCSAPLQERE*VRNLAQ Trigger: CTGTGCCAAGTTCCTCACTCATTCGCGCTCCTGTAG...GGGGGCTGAGCAGCTCCCAGGCAGACTGCCTTCTTTCACCCTGTCCTGATAGAC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAAGGCAGGTCCAGGGAGTCAGGCTGTCCTCCAGGGTCGCAGGCAGCAAGGCTGTTCCATGTAGCTaGCTTTCCAAACAAAAGACC | + |
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Preference number: 2 (lower is better) Translates to: GRRQVQGVRLSSRVAGSKAVPCS*LSKQKT Trigger: GGTCTTTTGTTTGGAAAGTCAGCTACATGGAACAGC...CTTGCTGCCTGCGACCCTGGAGGACAGCCTGACTCCCTGGACCTGCCTTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648974.1 |
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| 3UTR-3UTR TCA 90 bp | GGAACTTGGCACAGAGCACCTTTCTGTAGTAATCCCCACAGTGAGGAACAGAGGATTCGAGCACAGTCCTaGGTCAAGGGAGCCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GTWHRAPFCSNPHSEEQRIRAQS*VKGASG Trigger: CCCTGAGGCTCCCTTGACTCAGGACTGTGCTCGAAT...CCTCTGTTCCTCACTGTGGGGATTACTACAGAAAGGTGCTCTGTGCCAAGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| 3UTR-3UTR CCA 90 bp | GCGCGAATGAGTGAGGAACTTGGCACAGAGCACCTTTCTGTAGTAATCCCCACAAAGACATGGCAGGCATaGTTCAGGCTTTACTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ARMSEELGTEHLSVVIPTKTWQA*FRLYWA Trigger: TGCCCAGTAAAGCCTGAACCATGCCTGCCATGTCTT...TGTGGGGATTACTACAGAAAGGTGCTCTGTGCCAAGTTCCTCACTCATTCGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| 3UTR-3UTR TCA 90 bp | GGAACTTGGCACAGAGCACCTTTCTGTAGTAATCCCCACAGTGAGGAACAGAGGGACCAAGGAAATTTATaGACCTGCCTGATCACCACC | + |
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Preference number: 2 (lower is better) Translates to: GTWHRAPFCSNPHSEEQRDQGNL*TCLITT Trigger: GGTGGTGATCAGGCAGGTTCATAAATTTCCTTGGTC...CCTCTGTTCCTCACTGTGGGGATTACTACAGAAAGGTGCTCTGTGCCAAGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| 3UTR TCA 72 bp | AGGATATCTAGATCAGGGAAGTCTATCAGGACAGGGTaGAAGAAGGCAGTCTGCCTGGGAGCTGCTCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: RISRSGKSIRTG*KKAVCLGAAQP Trigger: GGGCTGAGCAGCTCCCAGGCAGACTGCCTTCTTTCACCCTGTCCTGATAGACTTCCCTGATCTAGATATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| 3UTR-3UTR CAA 90 bp | CCAATGAGGCCTTGGGGAAGAGAAGAGAGTAGAAAGAAGGAAAAAGGAAGAAGGATCACTGGGCCCTATTaGCTGTTCCATGTAGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: PMRPWGREESRKKEKGRRITGPY*LFHVAD Trigger: GTCAGCTACATGGAACAGCAAATAGGGCCCAGTGAT...CCTTCTTCCTTTTTCCTTCTTTCTACTCTCTTCTCTTCCCCAAGGCCTCATTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648974.1 |
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| 3UTR CCA 72 bp | GGGATGATGTTAGAAGAAAGGAAGCCAATGAGGCCTTaGGGAAGAGAAGAGAGTAGAAAGAAGGAAAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: GMMLEERKPMRP*GREESRKKEKG Trigger: TCCTTTTTCCTTCTTTCTACTCTCTTCTCTTCCCCAAGGCCTCATTGGCTTCCTTTCTTCTAACATCATCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000256593.8 ENST00000648974.1 |
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| CDS-3UTR CCA 90 bp | GAAGGCAGGTCCAGGGAGTCAGGCTGTCCTCCAGGGTCGCAGGCAGCAAGGTTGAGCAAGCGGATGGCGTaGGCCAGCCCACGGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: EGRSRESGCPPGSQAARLSKRMA*ASPRMS Trigger: GGACATCCGTGGGCTGGCCCACGCCATCCGCTTGCT...CAACCTTGCTGCCTGCGACCCTGGAGGACAGCCTGACTCCCTGGACCTGCCTTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR GCA 90 bp | GAAGGCAGGTCCAGGGAGTCAGGCTGTCCTCCAGGGTCGCAGGCAGCAAGGTTGAGTCTGCCTGGGAGCTaGTCAGCCCCCTTCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: EGRSRESGCPPGSQAARLSLPGS*SAPFPI Trigger: GATGGGGAAGGGGGCTGAGCAGCTCCCAGGCAGACT...CAACCTTGCTGCCTGCGACCCTGGAGGACAGCCTGACTCCCTGGACCTGCCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR GCA 90 bp | GAAGGCAGGTCCAGGGAGTCAGGCTGTCCTCCAGGGTCGCAGGCAGCAAGGTTGGGTTGGTGCGGATTCTaGAGACAGGCATCAGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: EGRSRESGCPPGSQAARLGWCGF*RQASAE Trigger: CTCCGCTGATGCCTGTCTGCAGAATCCGCACCAACC...CAACCTTGCTGCCTGCGACCCTGGAGGACAGCCTGACTCCCTGGACCTGCCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR TCA 90 bp | GGAAGAAGGCAGGTCCAGGGAGTCAGGCTGTCCTCCAGGGTCGCAGGCAGCAAGAGGAGCGCGAATGAGTaGGGAACTTGGCACAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GRRQVQGVRLSSRVAGSKRSANE*GTWHRA Trigger: TGCTCTGTGCCAAGTTCCTCACTCATTCGCGCTCCT...CTTGCTGCCTGCGACCCTGGAGGACAGCCTGACTCCCTGGACCTGCCTTCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR CCA 90 bp | GAAGGCAGGTCCAGGGAGTCAGGCTGTCCTCCAGGGTCGCAGGCAGCAAGGTTGCTGACCAGCTCCATGTaGTTATCCATAACCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: EGRSRESGCPPGSQAARLLTSSM*LSITWF Trigger: GAACCAGGTTATGGATAACCACATGGAGCTGGTCAG...CAACCTTGCTGCCTGCGACCCTGGAGGACAGCCTGACTCCCTGGACCTGCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR TCA 90 bp | GAAGGCAGGTCCAGGGAGTCAGGCTGTCCTCCAGGGTCGCAGGCAGCAAGGTTGGCTGTTCCATGTAGCTaGCTTTCCAAACAAAAGACC | + |
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Preference number: 4 (lower is better) Translates to: EGRSRESGCPPGSQAARLAVPCS*LSKQKT Trigger: GGTCTTTTGTTTGGAAAGTCAGCTACATGGAACAGC...CAACCTTGCTGCCTGCGACCCTGGAGGACAGCCTGACTCCCTGGACCTGCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256593.8 ENST00000648974.1 |
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| CDS-3UTR CCA 90 bp | GGAAGAAGGCAGGTCCAGGGAGTCAGGCTGTCCTCCAGGGTCGCAGGCAGCAAGCAGTTTCTCAAAATCTaGGTCATAGCACAGTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: GRRQVQGVRLSSRVAGSKQFLKI*VIAQSD Trigger: GTCAGACTGTGCTATGACCCAGATTTTGAGAAACTG...CTTGCTGCCTGCGACCCTGGAGGACAGCCTGACTCCCTGGACCTGCCTTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000256593.8 ENST00000648974.1 |
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| CDS-3UTR CCA 90 bp | GCGCGAATGAGTGAGGAACTTGGCACAGAGCACCTTTCTGTAGTAATCCCCACAAGAAGGCAGTCTGCCTaGGAGCTGCTCAGCCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: ARMSEELGTEHLSVVIPTRRQSA*ELLSPL Trigger: AAGGGGGCTGAGCAGCTCCCAGGCAGACTGCCTTCT...TGTGGGGATTACTACAGAAAGGTGCTCTGTGCCAAGTTCCTCACTCATTCGCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR TCA 90 bp | ACACACACACACACACACCCATCCACTAAGCTCTGGCTGTGGACAACAGAAGACATTCGAGCACAGTCCTaGGTCAAGGGAGCCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: THTHTHPSTKLWLWTTEDIRAQS*VKGASG Trigger: CCCTGAGGCTCCCTTGACTCAGGACTGTGCTCGAAT...GTCTTCTGTTGTCCACAGCCAGAGCTTAGTGGATGGGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR TCA 90 bp | ACACACACACACACACACCCATCCACTAAGCTCTGGCTGTGGACAACAGAAGACGGTCATAGCACAGTCTaGCCAGCTCCATGTGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: THTHTHPSTKLWLWTTEDGHSTV*PAPCGY Trigger: ATAACCACATGGAGCTGGTCAGACTGTGCTATGACC...GTCTTCTGTTGTCCACAGCCAGAGCTTAGTGGATGGGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR TCA 90 bp | GCGCGAATGAGTGAGGAACTTGGCACAGAGCACCTTTCTGTAGTAATCCCCACAATTTATGAACCTGCCTaGTCACCACCCCCAACACAC | + |
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Preference number: 4 (lower is better) Translates to: ARMSEELGTEHLSVVIPTIYEPA*SPPPTH Trigger: GTGTGTTGGGGGTGGTGATCAGGCAGGTTCATAAAT...TGTGGGGATTACTACAGAAAGGTGCTCTGTGCCAAGTTCCTCACTCATTCGCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR CCA 90 bp | GCGCGAATGAGTGAGGAACTTGGCACAGAGCACCTTTCTGTAGTAATCCCCACACCATCCACTAAGCTCTaGCTGTGGACAACAGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: ARMSEELGTEHLSVVIPTPSTKL*LWTTED Trigger: GTCTTCTGTTGTCCACAGCCAGAGCTTAGTGGATGG...TGTGGGGATTACTACAGAAAGGTGCTCTGTGCCAAGTTCCTCACTCATTCGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR TCA 90 bp | ATGAGGCCTTGGGGAAGAGAAGAGAGTAGAAAGAAGGAAAAAGGAAGAAGGCAGCTACAGGAGCGCGAATaGGTGAGGAACTTGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: MRPWGREESRKKEKGRRQLQERE*VRNLAQ Trigger: CTGTGCCAAGTTCCTCACTCATTCGCGCTCCTGTAG...CTGCCTTCTTCCTTTTTCCTTCTTTCTACTCTCTTCTCTTCCCCAAGGCCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR TCA 90 bp | ACACACACACACACACACCCATCCACTAAGCTCTGGCTGTGGACAACAGAAGACGCTGTTCCATGTAGCTaGCTTTCCAAACAAAAGACC | + |
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Preference number: 4 (lower is better) Translates to: THTHTHPSTKLWLWTTEDAVPCS*LSKQKT Trigger: GGTCTTTTGTTTGGAAAGTCAGCTACATGGAACAGC...GTCTTCTGTTGTCCACAGCCAGAGCTTAGTGGATGGGTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR TCA 90 bp | CCAATGAGGCCTTGGGGAAGAGAAGAGAGTAGAAAGAAGGAAAAAGGAAGAAGGAGCCTAGCCCCTCTTTaGACCATGCCAGTTCTAGAC | + |
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Preference number: 4 (lower is better) Translates to: PMRPWGREESRKKEKGRRSLAPL*TMPVLD Trigger: GTCTAGAACTGGCATGGTTCAAAGAGGGGCTAGGCT...CCTTCTTCCTTTTTCCTTCTTTCTACTCTCTTCTCTTCCCCAAGGCCTCATTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR TCA 90 bp | ATGAGGCCTTGGGGAAGAGAAGAGAGTAGAAAGAAGGAAAAAGGAAGAAGGCAGTCTATCAGGACAGGGTaGAAGAAGGCAGTCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: MRPWGREESRKKEKGRRQSIRTG*KKAVCL Trigger: CAGGCAGACTGCCTTCTTTCACCCTGTCCTGATAGA...CTGCCTTCTTCCTTTTTCCTTCTTTCTACTCTCTTCTCTTCCCCAAGGCCTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR CCA 90 bp | GCGCGAATGAGTGAGGAACTTGGCACAGAGCACCTTTCTGTAGTAATCCCCACACAGTTTCTCAAAATCTaGGTCATAGCACAGTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: ARMSEELGTEHLSVVIPTQFLKI*VIAQSD Trigger: GTCAGACTGTGCTATGACCCAGATTTTGAGAAACTG...TGTGGGGATTACTACAGAAAGGTGCTCTGTGCCAAGTTCCTCACTCATTCGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR CCA 90 bp | ATGAGGCCTTGGGGAAGAGAAGAGAGTAGAAAGAAGGAAAAAGGAAGAAGGCAGAAGACATGGCAGGCATaGTTCAGGCTTTACTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: MRPWGREESRKKEKGRRQKTWQA*FRLYWA Trigger: TGCCCAGTAAAGCCTGAACCATGCCTGCCATGTCTT...CTGCCTTCTTCCTTTTTCCTTCTTTCTACTCTCTTCTCTTCCCCAAGGCCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR TCA 90 bp | ATGAGGCCTTGGGGAAGAGAAGAGAGTAGAAAGAAGGAAAAAGGAAGAAGGCAGGACCAAGGAAATTTATaGACCTGCCTGATCACCACC | + |
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Preference number: 4 (lower is better) Translates to: MRPWGREESRKKEKGRRQDQGNL*TCLITT Trigger: GGTGGTGATCAGGCAGGTTCATAAATTTCCTTGGTC...CTGCCTTCTTCCTTTTTCCTTCTTTCTACTCTCTTCTCTTCCCCAAGGCCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS TCA 90 bp | GCTGGAGGCATCAAACACAGGCATCTTCGGCTCCCAGACTGTAGCTaGAGCACTCGCTCAGGGGCAGTAGGCAAGGGAGAGAAGGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: AGGIKHRHLRLPDCS*STRSGAVGKGEKGG Trigger: ACCTCCCTTCTCTCCCTTGCCTACTGCCCCTGAGCGAGTGCTTCAGCTACAGTCTGGGAGCCGAAGATGCCTGTGTTTGATGCCTCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429410.2 |
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| CDS-3UTR CAA 90 bp | GGAAGAAGGCAGGTCCAGGGAGTCAGGCTGTCCTCCAGGGTCGCAGGCAGCAAGATCACTGGGCCCTATTaGCTGTTCCATGTAGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: GRRQVQGVRLSSRVAGSKITGPY*LFHVAD Trigger: GTCAGCTACATGGAACAGCAAATAGGGCCCAGTGAT...CTTGCTGCCTGCGACCCTGGAGGACAGCCTGACTCCCTGGACCTGCCTTCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000256593.8 ENST00000648974.1 |
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| CDS TCA 90 bp | GGACTCAATGGCTGCATGTGGGAAGTGGATAGTGGGACCAAAGACTaGGATGGGGACACAGGGGAAGCGCGGTATTGTGGAGACAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: GLNGCMWEVDSGTKD*DGDTGEARYCGDSN Trigger: GTTGCTGTCTCCACAATACCGCGCTTCCCCTGTGTCCCCATCTCAGTCTTTGGTCCCACTATCCACTTCCCACATGCAGCCATTGAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429410.2 |
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| CDS GCA 90 bp | GGGACACAGGGGAAGCGCGGTATTGTGGAGACAGCAACACCAGTCTaGAGCATGATGCACTTGAAATGTCTCAGGGACATTGGCCAAAGG | + |
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Preference number: 5 (lower is better) Translates to: GTQGKRGIVETATPV*SMMHLKCLRDIGQR Trigger: CCTTTGGCCAATGTCCCTGAGACATTTCAAGTGCATCATGCTGCAGACTGGTGTTGCTGTCTCCACAATACCGCGCTTCCCCTGTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429410.2 |
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| CDS-3UTR CAA 90 bp | GCGCGAATGAGTGAGGAACTTGGCACAGAGCACCTTTCTGTAGTAATCCCCACACAGCCTAGCCCCTCTTaGAACCATGCCAGTTCTAGA | + |
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Preference number: 5 (lower is better) Translates to: ARMSEELGTEHLSVVIPTQPSPS*NHASSR Trigger: TCTAGAACTGGCATGGTTCAAAGAGGGGCTAGGCTG...TGTGGGGATTACTACAGAAAGGTGCTCTGTGCCAAGTTCCTCACTCATTCGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS-3UTR CAA 90 bp | GCGCGAATGAGTGAGGAACTTGGCACAGAGCACCTTTCTGTAGTAATCCCCACAATCACTGGGCCCTATTaGCTGTTCCATGTAGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: ARMSEELGTEHLSVVIPTITGPY*LFHVAD Trigger: GTCAGCTACATGGAACAGCAAATAGGGCCCAGTGAT...TGTGGGGATTACTACAGAAAGGTGCTCTGTGCCAAGTTCCTCACTCATTCGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000256593.8 |
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| CDS CCA 90 bp | AACACCAGTCTGCAGCATGATGCACTTGAAATGTCTCAGGGACATTaGCCAAAGGTGGGCAAGAGATGGTCACGTGGCTGGATTCAAGAT | + |
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Preference number: 5 (lower is better) Translates to: NTSLQHDALEMSQGH*PKVGKRWSRGWIQD Trigger: ATCTTGAATCCAGCCACGTGACCATCTCTTGCCCACCTTTGGCCAATGTCCCTGAGACATTTCAAGTGCATCATGCTGCAGACTGGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429410.2 |
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| CDS-3UTR CAA 90 bp | ATGAGGCCTTGGGGAAGAGAAGAGAGTAGAAAGAAGGAAAAAGGAAGAAGGCAGTCCACAAAGGTGATCTaGTCTCCTGCAAACCATGGC | + |
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Preference number: 5 (lower is better) Translates to: MRPWGREESRKKEKGRRQSTKVI*SPANHG Trigger: GCCATGGTTTGCAGGAGACAAGATCACCTTTGTGGA...CTGCCTTCTTCCTTTTTCCTTCTTTCTACTCTCTTCTCTTCCCCAAGGCCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256593.8 ENST00000648974.1 |
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| CDS-3UTR CAA 90 bp | CCAATGAGGCCTTGGGGAAGAGAAGAGAGTAGAAAGAAGGAAAAAGGAAGAAGGTCCACAAAGGTGATCTaGTCTCCTGCAAACCATGGC | + |
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Preference number: 5 (lower is better) Translates to: PMRPWGREESRKKEKGRRSTKVI*SPANHG Trigger: GCCATGGTTTGCAGGAGACAAGATCACCTTTGTGGA...CCTTCTTCCTTTTTCCTTCTTTCTACTCTCTTCTCTTCCCCAAGGCCTCATTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000256593.8 ENST00000648974.1 |
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| CDS TCA 72 bp | ATCAAACACAGGCATCTTCGGCTCCCAGACTGTAGCTaGAGCACTCGCTCAGGGGCAGTAGGCAAGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: IKHRHLRLPDCS*STRSGAVGKGE Trigger: CTCTCCCTTGCCTACTGCCCCTGAGCGAGTGCTTCAGCTACAGTCTGGGAGCCGAAGATGCCTGTGTTTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429410.2 |
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| CDS TCA 72 bp | GGCTGCATGTGGGAAGTGGATAGTGGGACCAAAGACTaGGATGGGGACACAGGGGAAGCGCGGTATTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GCMWEVDSGTKD*DGDTGEARYCG Trigger: TCCACAATACCGCGCTTCCCCTGTGTCCCCATCTCAGTCTTTGGTCCCACTATCCACTTCCCACATGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429410.2 |
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| CDS CCA 72 bp | CATTGGCCAAAGGTGGGCAAGAGATGGTCACGTGGCTaGATTCAAGATGCAGAGACAGGGTGCTGGAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: HWPKVGKRWSRG*IQDAETGCWRH Trigger: ATGCCTCCAGCACCCTGTCTCTGCATCTTGAATCCAGCCACGTGACCATCTCTTGCCCACCTTTGGCCAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429410.2 |
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| CDS CAA 90 bp | CGCGGTATTGTGGAGACAGCAACACCAGTCTGCAGCATGATGCACTaGAAATGTCTCAGGGACATTGGCCAAAGGTGGGCAAGAGATGGT | + |
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Preference number: 6 (lower is better) Translates to: RGIVETATPVCSMMH*KCLRDIGQRWARDG Trigger: ACCATCTCTTGCCCACCTTTGGCCAATGTCCCTGAGACATTTCAAGTGCATCATGCTGCAGACTGGTGTTGCTGTCTCCACAATACCGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429410.2 |
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| CDS GCA 72 bp | GGGAAGCGCGGTATTGTGGAGACAGCAACACCAGTCTaGAGCATGATGCACTTGAAATGTCTCAGGGACATT | + |
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Preference number: 6 (lower is better) Translates to: GKRGIVETATPV*SMMHLKCLRDI Trigger: AATGTCCCTGAGACATTTCAAGTGCATCATGCTGCAGACTGGTGTTGCTGTCTCCACAATACCGCGCTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429410.2 |
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| CDS TCA 72 bp | CATTTATTAGACTCTGACTGGGTGCCAGACCCTATCTaGAGTGATCAGAATGAGATGCTCTTCCTGAATCTG | + |
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Preference number: 6 (lower is better) Translates to: HLLDSDWVPDPI*SDQNEMLFLNL Trigger: CAGATTCAGGAAGAGCATCTCATTCTGATCACTTCAGATAGGGTCTGGCACCCAGTCAGAGTCTAATAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000483153.1 ENST00000492718.1 |
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| CDS GCA 72 bp | CAGCTACCATTTACGAAAGATCTACACTGTGCTGGGTaGTTTATATCCAACAGAAATTACAACACAGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: QLPFTKDLHCAG*FISNRNYNTGL Trigger: TAAGCCTGTGTTGTAATTTCTGTTGGATATAAAGCACCCAGCACAGTGTAGATCTTTCGTAAATGGTAGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369813.5 ENST00000492718.1 |
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