RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GSG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000111305

Ensembl transcript IDs: ENST00000337630.10, ENST00000351606.10, ENST00000396302.7, ENST00000432710.6, ENST00000457134.6, ENST00000537302.5, ENST00000542415.5, ENST00000545401.5, ENST00000545699.1, ENST00000651961.1

Found 517 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCAGAGACAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTaGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAGCCGCCGAG +
Preference number: 1 (lower is better)
Translates to: PQRQSGWADYDTGGS*SKDPRWGLHLTAAE
Trigger: CTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTGTCTCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR CCA 90 bp TGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTaGGGGCTGCACTTGACAGCCGCCGAGGGAAACACTGATGGTGAT +
Preference number: 1 (lower is better)
Translates to: WADYDTGGSWSKDPR*GLHLTAAEGNTDGD
Trigger: ATCACCATCAGTGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR CCA 90 bp TCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATaGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGG +
Preference number: 1 (lower is better)
Translates to: SAARSRSRLPQRQSG*ADYDTGGSWSKDPR
Trigger: CCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR TCA 90 bp CAGAGAGGAGCCTATGCCCCCTTGTTCACTGGGAAGTCCCTGGTGTaGCTGTCCAGAAGGGAACCACAGTCCAATCTGAATAGCCTTGGT +
Preference number: 1 (lower is better)
Translates to: QRGAYAPLFTGKSLV*LSRREPQSNLNSLG
Trigger: ACCAAGGCTATTCAGATTGGACTGTGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCCAGTGAACAAGGGGGCATAGGCTCCTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR CCA 90 bp ACTGGGTACCTACTGTGTGGATGCAGGACACTGTCCCAGGCAGTGTaGAGGACTTCTGTGCTATATGACAAAGCACTCAGGGGCGCTTCT +
Preference number: 1 (lower is better)
Translates to: TGYLLCGCRTLSQAV*RTSVLYDKALRGAS
Trigger: AGAAGCGCCCCTGAGTGCTTTGTCATATAGCACAGAAGTCCTCCACACTGCCTGGGACAGTGTCCTGCATCCACACAGTAGGTACCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR CCA 90 bp CCTTGGTGGGCTATTTCTAGAAGTGACCCTGACCCTGTGTGCTGTTaGCGCCTTCTCATGTTAAACCACTCTCCTAAGGGCTCCTGGGAC +
Preference number: 1 (lower is better)
Translates to: PWWAISRSDPDPVCC*RLLMLNHSPKGSWD
Trigger: GTCCCAGGAGCCCTTAGGAGAGTGGTTTAACATGAGAAGGCGCCAACAGCACACAGGGTCAGGGTCACTTCTAGAAATAGCCCACCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR CCA 90 bp ATGAAAAGGTGGGATCCAGAGAGGAGCCTATGCCCCCTTGTTCACTaGGAAGTCCCTGGTGTGACTGTCCAGAAGGGAACCACAGTCCAA +
Preference number: 1 (lower is better)
Translates to: MKRWDPERSLCPLVH*EVPGVTVQKGTTVQ
Trigger: TTGGACTGTGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCCAGTGAACAAGGGGGCATAGGCTCCTCTCTGGATCCCACCTTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR CCA 90 bp TATGAAGGAAATAATAGGGTACATTTCTCAGAAGGGATGAAAAGGTaGGATCCAGAGAGGAGCCTATGCCCCCTTGTTCACTGGGAAGTC +
Preference number: 1 (lower is better)
Translates to: YEGNNRVHFSEGMKR*DPERSLCPLVHWEV
Trigger: GACTTCCCAGTGAACAAGGGGGCATAGGCTCCTCTCTGGATCCCACCTTTTCATCCCTTCTGAGAAATGTACCCTATTATTTCCTTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR TCA 90 bp GCATTCTTTATGAAGGAAATAATAGGGTACATTTCTCAGAAGGGATaGAAAGGTGGGATCCAGAGAGGAGCCTATGCCCCCTTGTTCACT +
Preference number: 1 (lower is better)
Translates to: AFFMKEIIGYISQKG*KGGIQRGAYAPLFT
Trigger: AGTGAACAAGGGGGCATAGGCTCCTCTCTGGATCCCACCTTTTCATCCCTTCTGAGAAATGTACCCTATTATTTCCTTCATAAAGAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR GCA 90 bp TTCCCACCTGTGAGTGAGAATATGCAGTGTTTGGTTTTCTATCCTTaGGATAGTTTGCTCAGAATGATGGTTTCCAGCTTCATCCATGTC +
Preference number: 1 (lower is better)
Translates to: FPPVSENMQCLVFYP*DSLLRMMVSSFIHV
Trigger: GACATGGATGAAGCTGGAAACCATCATTCTGAGCAAACTATCGCAAGGATAGAAAACCAAACACTGCATATTCTCACTCACAGGTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR TCA 90 bp TGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCGGTGGGGGCTGCACTTaGCAGCCGCCGAGGGAAACA +
Preference number: 2 (lower is better)
Translates to: CFFQLLAGPSLKSLVPQLGGGCT*QPPRET
Trigger: TGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACC...GAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR CAA 90 bp GATACTGGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTaGACAGCCGCCGAGGGAAACACTGATGGTGATGTGGTAGGCAGT +
Preference number: 2 (lower is better)
Translates to: DTGGSWSKDPRWGLH*TAAEGNTDGDVVGS
Trigger: ACTGCCTACCACATCACCATCAGTGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR-3UTR TCA 90 bp TTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGAGGTGGGGGCTGCACTTaGCAGCCGCCGAGGGAAACA +
Preference number: 2 (lower is better)
Translates to: LKSLVPQLGVEVDSLRDRGGGCT*QPPRET
Trigger: TGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACC...TCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR-3UTR CCA 90 bp CTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTTCAAAGGACCCACGGTaGGGGCTGCACTTGACAGCC +
Preference number: 2 (lower is better)
Translates to: LLLSAPGWPLFEIPCSAASKDPR*GLHLTA
Trigger: GGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGA...AGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR-3UTR CCA 90 bp CTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTGATACTGGTGGTAGCTaGTCAAAGGACCCACGGTGG +
Preference number: 2 (lower is better)
Translates to: LLLSAPGWPLFEIPCSAADTGGS*SKDPRW
Trigger: CCACCGTGGGTCCTTTGACCAGCTACCACCAGTATC...AGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR-3UTR TCA 90 bp GGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGGGGAAGTCCCTGGTGTaGCTGTCCAGAAGGGAACCA +
Preference number: 2 (lower is better)
Translates to: GMAGSNGISRSRFLRNQMGKSLV*LSRREP
Trigger: TGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCC...CATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR GCA 90 bp ATGTTCCCCACCCTGTGTCCAAGTGTTTTTATTGTTCAATTCCCACCTGTGAGTGACCCTGACCCTGTGTaGTGTTGGCGCCTTCTCATG +
Preference number: 2 (lower is better)
Translates to: MFPTLCPSVFIVQFPPVSDPDPV*CWRLLM
Trigger: CATGAGAAGGCGCCAACAGCACACAGGGTCAGGGTC...ACTCACAGGTGGGAATTGAACAATAAAAACACTTGGACACAGGGTGGGGAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR CCA 90 bp GCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTTCAAGAGACGGATGTTaGCTTAAGCACATGTTGATA +
Preference number: 2 (lower is better)
Translates to: APGWPLFEIPCSAARSRSSRDGC*LKHMLI
Trigger: TATCAACATGTGCTTAAGCCAACATCCGTCTCTTGA...ACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396302.7
3UTR-3UTR CCA 90 bp AGCCTTGGTGGGCTATTTCTAGAAGTGACCCTGACCCTGTGTGCTGTTGGCGCCTCAAGAGACGGATGTTaGCTTAAGCACATGTTGATA +
Preference number: 2 (lower is better)
Translates to: SLGGLFLEVTLTLCAVGASRDGC*LKHMLI
Trigger: TATCAACATGTGCTTAAGCCAACATCCGTCTCTTGA...GGCGCCAACAGCACACAGGGTCAGGGTCACTTCTAGAAATAGCCCACCAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR TCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTACTCTTCCTCTACAGATaGCCTAACTGCTTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLLFLYR*PNCFFQ
Trigger: CTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAG...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR-3UTR CCA 90 bp ATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGGACACTGTCCCAGGCAGAATTCGCGCGTACCATaGAAAGTTGAGCCACAGTCA +
Preference number: 2 (lower is better)
Translates to: ITLLLGTYCVDAGHCPRQNSRVP*KVEPQS
Trigger: TGACTGTGGCTCAACTTTCCATGGTACGCGCGAATT...CTGCCTGGGACAGTGTCCTGCATCCACACAGTAGGTACCCAGTAAAAGTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR GCA 90 bp ATCTACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTCCAGAGAGGAGCCTATaGCCCCTTGTTCACTGGGAA +
Preference number: 2 (lower is better)
Translates to: IYPVMGWLGQMVFLGLDSPERSL*PLVHWE
Trigger: TTCCCAGTGAACAAGGGGGCATAGGCTCCTCTCTGG...AGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR CCA 90 bp GTCTTCCCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCGTGGGTGAAACAAGATaGAGCTGTAGAGGAAAAGAG +
Preference number: 2 (lower is better)
Translates to: VFPSVTSRTIRAYHGKLSVGETR*SCRGKE
Trigger: CTCTTTTCCTCTACAGCTCCATCTTGTTTCACCCAC...GCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR CAA 90 bp TTCCCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTaGAGCCACAGTCACACTACCGTTAATTTGCTCACCTCCATTTCT +
Preference number: 2 (lower is better)
Translates to: FPSVTSRTIRAYHGK*SHSHTTVNLLTSIS
Trigger: AGAAATGGAGGTGAGCAAATTAACGGTAGTGTGACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR TCA 90 bp CCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGGCGTACCATGGAAAGTTaGGCCACAGTCACACTACCG +
Preference number: 2 (lower is better)
Translates to: PGTIFNNTFTGYLLCGCRRTMES*ATVTLP
Trigger: CGGTAGTGTGACTGTGGCTCAACTTTCCATGGTACG...CCTGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR CAA 90 bp CGCGCGTACCATGGAAAGTTGAGCCACAGTCACACTACCGTTAATTaGCTCACCTCCATTTCTCCAATTTCCAGACCAATAACTAGATGT +
Preference number: 2 (lower is better)
Translates to: RAYHGKLSHSHTTVN*LTSISPISRPITRC
Trigger: ACATCTAGTTATTGGTCTGGAAATTGGAGAAATGGAGGTGAGCAAATTAACGGTAGTGTGACTGTGGCTCAACTTTCCATGGTACGCGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR GCA 90 bp ATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGGACACTGTCCCAGGCAGACACTACCGTTAATTTaGTCACCTCCATTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: ITLLLGTYCVDAGHCPRQTLPLI*SPPFLQ
Trigger: TTGGAGAAATGGAGGTGAGCAAATTAACGGTAGTGT...CTGCCTGGGACAGTGTCCTGCATCCACACAGTAGGTACCCAGTAAAAGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR CCA 90 bp GTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTCACACTTCAAGAGACGGATGTTaGCTTAAGCACATGTTGATA +
Preference number: 2 (lower is better)
Translates to: VTSRTIRAYHGKLSHSHTSRDGC*LKHMLI
Trigger: TATCAACATGTGCTTAAGCCAACATCCGTCTCTTGA...AGTGTGACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR CCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCTCAAGAGACGGATGTTaGCTTAAGCACATGTTGATA +
Preference number: 2 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTSRDGC*LKHMLI
Trigger: TATCAACATGTGCTTAAGCCAACATCCGTCTCTTGA...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
3UTR-3UTR GCA 90 bp TCCTTTGGGTATCTACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGGTGTGGAGGACTTCTGTaGTATATGACAAAGCACTCA +
Preference number: 2 (lower is better)
Translates to: SFGYLPSNGMAGSNGISRCGGLL*YMTKHS
Trigger: TGAGTGCTTTGTCATATAGCACAGAAGTCCTCCACA...CCTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTAGATACCCAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR GCA 90 bp ATGTTCCCCACCCTGTGTCCAAGTGTTTTTATTGTTCAATTCCCACCTGTGAGTTGTGGAGGACTTCTGTaGTATATGACAAAGCACTCA +
Preference number: 2 (lower is better)
Translates to: MFPTLCPSVFIVQFPPVSCGGLL*YMTKHS
Trigger: TGAGTGCTTTGTCATATAGCACAGAAGTCCTCCACA...ACTCACAGGTGGGAATTGAACAATAAAAACACTTGGACACAGGGTGGGGAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR CCA 90 bp ATGTTCCCCACCCTGTGTCCAAGTGTTTTTATTGTTCAATTCCCACCTGTGAGTTTCTTTTTATCTCCATaGTTTAGCCCAGAACCTGGC +
Preference number: 2 (lower is better)
Translates to: MFPTLCPSVFIVQFPPVSFFLSP*FSPEPG
Trigger: GCCAGGTTCTGGGCTAAACCATGGAGATAAAAAGAA...ACTCACAGGTGGGAATTGAACAATAAAAACACTTGGACACAGGGTGGGGAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR GCA 90 bp CCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGGACACTACCGTTAATTTaGTCACCTCCATTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: PGTIFNNTFTGYLLCGCRTLPLI*SPPFLQ
Trigger: TTGGAGAAATGGAGGTGAGCAAATTAACGGTAGTGT...CCTGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR CAA 90 bp AGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTaGAGGAATCAGATGGGTGGCATTCTTTATGAAGGAAATAATAGG +
Preference number: 2 (lower is better)
Translates to: SNGMAGSNGISRSRF*RNQMGGILYEGNNR
Trigger: CCTATTATTTCCTTCATAAAGAATGCCACCCATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCCATTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR CAA 90 bp CTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGCGGTGGGGGCTGCACTaGACAGCCGCCGAGGGAAAC +
Preference number: 3 (lower is better)
Translates to: LVPQLGVEVDSLRDRVDGRWGLH*TAAEGN
Trigger: GTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCG...CCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR CCA 72 bp TATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTaGGGGCTGCACTTGACAGCCGCCGAGGGAAACACT +
Preference number: 3 (lower is better)
Translates to: YDTGGSWSKDPR*GLHLTAAEGNT
Trigger: AGTGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR CCA 72 bp CAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTaGTCAAAGGACCCACGGTGGGGGCTGCACTTGACA +
Preference number: 3 (lower is better)
Translates to: QSGWADYDTGGS*SKDPRWGLHLT
Trigger: TGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR-3UTR CAA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTACTGGCTGGCCCCTCTTaGAAATCCCTTGTTCCGCAG +
Preference number: 3 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLLAGPS*KSLVPQ
Trigger: CTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAG...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR TCA 72 bp GCCTATGCCCCCTTGTTCACTGGGAAGTCCCTGGTGTaGCTGTCCAGAAGGGAACCACAGTCCAATCTGAAT +
Preference number: 3 (lower is better)
Translates to: AYAPLFTGKSLV*LSRREPQSNLN
Trigger: ATTCAGATTGGACTGTGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCCAGTGAACAAGGGGGCATAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR CAA 90 bp CACTGGGAAGTCCCTGGTGTGACTGTCCAGAAGGGAACCACAGTCCAATCTGAAGCGTACCATGGAAAGTaGAGCCACAGTCACACTACC +
Preference number: 3 (lower is better)
Translates to: HWEVPGVTVQKGTTVQSEAYHGK*SHSHTT
Trigger: GGTAGTGTGACTGTGGCTCAACTTTCCATGGTACGC...TTCAGATTGGACTGTGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR GCA 72 bp TGGTGGGCTATTTCTAGAAGTGACCCTGACCCTGTGTaGTGTTGGCGCCTTCTCATGTTAAACCACTCTCCT +
Preference number: 3 (lower is better)
Translates to: WWAISRSDPDPV*CWRLLMLNHSP
Trigger: AGGAGAGTGGTTTAACATGAGAAGGCGCCAACAGCACACAGGGTCAGGGTCACTTCTAGAAATAGCCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR CCA 72 bp GCTATTTCTAGAAGTGACCCTGACCCTGTGTGCTGTTaGCGCCTTCTCATGTTAAACCACTCTCCTAAGGGC +
Preference number: 3 (lower is better)
Translates to: AISRSDPDPVCC*RLLMLNHSPKG
Trigger: GCCCTTAGGAGAGTGGTTTAACATGAGAAGGCGCCAACAGCACACAGGGTCAGGGTCACTTCTAGAAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR CAA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTATGGCTTAAGCACATGTaGATAATCAGCAGACGTGTA +
Preference number: 3 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLWLKHM*IISRRV
Trigger: TACACGTCTGCTGATTATCAACATGTGCTTAAGCCA...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
3UTR-3UTR CAA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCTGGCTTAAGCACATGTaGATAATCAGCAGACGTGTA +
Preference number: 3 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTWLKHM*IISRRV
Trigger: TACACGTCTGCTGATTATCAACATGTGCTTAAGCCA...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
3UTR-3UTR CAA 90 bp CCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTTGGCTTAAGCACATGTaGATAATCAGCAGACGTGTA +
Preference number: 3 (lower is better)
Translates to: PSVTSRTIRAYHGKLSHSWLKHM*IISRRV
Trigger: TACACGTCTGCTGATTATCAACATGTGCTTAAGCCA...ACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR GCA 72 bp TGCACAACGTGCAGATTTGTTACATATGTATACATGTaGCATGTTGGTGTGCTGCACCCATTAACTCGTCAT +
Preference number: 3 (lower is better)
Translates to: CTTCRFVTYVYM*HVGVLHPLTRH
Trigger: ATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACAAATCTGCACGTTGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR CAA 90 bp CTCCTAAGGGCTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGGCTTAAGCACATGTaGATAATCAGCAGACGTGTA +
Preference number: 3 (lower is better)
Translates to: LLRAPGTIFNNTFTGYLLWLKHM*IISRRV
Trigger: TACACGTCTGCTGATTATCAACATGTGCTTAAGCCA...CAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAGCCCTTAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR-3UTR CAA 90 bp CTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCACACACTACCGTTAATTaGCTCACCTCCATTTCTCCA +
Preference number: 3 (lower is better)
Translates to: LLGQYLITLLLGTYCVDAHTTVN*LTSISP
Trigger: TGGAGAAATGGAGGTGAGCAAATTAACGGTAGTGTG...TGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR TCA 72 bp TCCAAGTGTTTTTATTGTTCAATTCCCACCTGTGAGTaGGAATATGCAGTGTTTGGTTTTCTATCCTTGCGA +
Preference number: 3 (lower is better)
Translates to: SKCFYCSIPTCE*EYAVFGFLSLR
Trigger: TCGCAAGGATAGAAAACCAAACACTGCATATTCTCACTCACAGGTGGGAATTGAACAATAAAAACACTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp GGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAGCCGCCGAGGGACACAGGATAGCCACATaGCACTCCGGAAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: GSWSKDPRWGLHLTAAEGHRIAT*HSGSSG
Trigger: TCCGGAGCTTCCGGAGTGGCATGTGGCTATCCTGTG...TCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR GCA 90 bp GGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAGCCGCCGAGGGAAATCAGGTCCCCTCTTaGCAGCAGAGGGGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: GSWSKDPRWGLHLTAAEGNQVPS*QQRGKV
Trigger: CACCTTACCCCTCTGCTGGCAAGAGGGGACCTGATT...TCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000351606.10
CDS-3UTR CCA 90 bp GGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAGCCGCCGAGGGATCGAGAGCTCCATCTTaGCCATGGTCAGCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GSWSKDPRWGLHLTAAEGSRAPS*PWSASC
Trigger: GCAAGACGCTGACCATGGCCAAGATGGAGCTCTCGA...TCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CCA 90 bp GGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAGCCGCCGAGGATACTGGTGGTAGCTaGTCAAAGGACCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: GGSWSKDPRWGLHLTAAEDTGGS*SKDPRW
Trigger: CCACCGTGGGTCCTTTGACCAGCTACCACCAGTATC...CTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR GCA 90 bp CCACGGTGGGGGCTGCACTTGACAGCCGCCGAGGGAAACACTGATGGTGATGTGGCACCTCTCCCCTTTTaGTGCCGCTGTACCACTGGA +
Preference number: 4 (lower is better)
Translates to: PRWGLHLTAAEGNTDGDVAPLPF*CRCTTG
Trigger: TCCAGTGGTACAGCGGCAGCAAAAGGGGAGAGGTGC...CACATCACCATCAGTGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000351606.10
3UTR CAA 72 bp GGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTaGACAGCCGCCGAGGGAAACACTGATGGTGATGTG +
Preference number: 4 (lower is better)
Translates to: GSWSKDPRWGLH*TAAEGNTDGDV
Trigger: CACATCACCATCAGTGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR GCA 90 bp AGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAGCCGCCGAGGGAAACGTCAAAGCACTTGGCTaGCAGACCTTTCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: SWSKDPRWGLHLTAAEGNVKALG*QTFLAQ
Trigger: CTGTGCGAGAAAGGTCTGGCAGCCAAGTGCTTTGAC...GTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp GGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAGCCGCCGAGGTACCACCTCCTGGGTaGATGTGTTGGTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: GGSWSKDPRWGLHLTAAEVPPPG*MCWYLH
Trigger: ATGGAGATACCAACACATCCACCCAGGAGGTGGTAC...CTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp CCACGGTGGGGGCTGCACTTGACAGCCGCCGAGGGAAACACTGATGGTGATGTGGAGAGTGGGGTGACATaGGCCTTGCAACGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PRWGLHLTAAEGNTDGDVESGVT*ALQRGK
Trigger: TTTGCCACGTTGCAAGGCCCATGTCACCCCACTCTC...CACATCACCATCAGTGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp GCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCAAAGGCGCTCAGTTTaGGCCCACAGGCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: APGWPLFEIPCSAARSRSQRRSV*AHRQGS
Trigger: GGAACCCTGCCTGTGGGCTCAAACTGAGCGCCTTTG...ACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCGGTGGGGGCTGCACTTaGCAGCCGCCGAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRGGGCT*QPPRET
Trigger: TGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACC...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR GCA 90 bp CAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAACCTCTCCCCTTTTGCTaGCGCTGTACCACTGGACCG +
Preference number: 4 (lower is better)
Translates to: QLLAGPSLKSLVPQLGVEPLPFC*RCTTGP
Trigger: CGGTCCAGTGGTACAGCGGCAGCAAAAGGGGAGAGG...TTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000351606.10
CDS-3UTR CCA 90 bp CAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAATCTCGCACAGGGGCTTaGGCACCTTCTGTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: QLLAGPSLKSLVPQLGVESRTGA*APSVCP
Trigger: TGGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGA...TTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp AGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAGCCGCCGAGGGAAACGTACCACCTCCTGGGTaGATGTGTTGGTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: SWSKDPRWGLHLTAAEGNVPPPG*MCWYLH
Trigger: ATGGAGATACCAACACATCCACCCAGGAGGTGGTAC...GTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp AGCCTTGGTGGGCTATTTCTAGAAGTGACCCTGACCCTGTGTGCTGTTGGCGCCTCAAAGGACCCACGGTaGGGGCTGCACTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: SLGGLFLEVTLTLCAVGASKDPR*GLHLTA
Trigger: GGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGA...GGCGCCAACAGCACACAGGGTCAGGGTCACTTCTAGAAATAGCCCACCAAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp GGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAGCCGCCGAGATGGGCCTTGCAACGTaGCAAATTCCAGTAGTCCTT +
Preference number: 4 (lower is better)
Translates to: GGSWSKDPRWGLHLTAAEMGLAT*QIPVVL
Trigger: AAGGACTACTGGAATTTGCCACGTTGCAAGGCCCAT...CTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp AGCCTTGGTGGGCTATTTCTAGAAGTGACCCTGACCCTGTGTGCTGTTGGCGCCGGGAAGTCCCTGGTGTaGCTGTCCAGAAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: SLGGLFLEVTLTLCAVGAGKSLV*LSRREP
Trigger: TGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCC...GGCGCCAACAGCACACAGGGTCAGGGTCACTTCTAGAAATAGCCCACCAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp TGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGGATAGGAGTGTCCGCTaGCCAGAGAAGGCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: WADYDTGGSWSKDPRWGLDRSVR*PEKAFE
Trigger: CTCGAAGGCCTTCTCTGGCCAGCGGACACTCCTATC...CAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp TATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACATCAAAGGACCCACGGTaGGGGCTGCACTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: YDTGGSWSKDPRWGLHLTSKDPR*GLHLTA
Trigger: GGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGA...TGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAGGTGGGGGCTGCACTTaGCAGCCGCCGAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQGGGCT*QPPRET
Trigger: TGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACC...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCGGTGGGGGCTGCACTTaGCAGCCGCCGAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTGGGCT*QPPRET
Trigger: TGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACC...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp TATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAAATCGGAGAGTGGGGTaGCATGGGCCTTGCAACGTG +
Preference number: 4 (lower is better)
Translates to: YDTGGSWSKDPRWGLHLTNRRVG*HGPCNV
Trigger: CACGTTGCAAGGCCCATGTCACCCCACTCTCCGATT...TGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR GCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCCCTCTCCCCTTTTGCTaGCGCTGTACCACTGGACCG +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRPLPFC*RCTTGP
Trigger: CGGTCCAGTGGTACAGCGGCAGCAAAAGGGGAGAGG...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CACTGCTCTTCCTCTACAGATGACCTAACTGCTTCTTTCAGCTCCTGGCTGGCCTCTCGCACAGGGGCTTaGGCACCTTCTGTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: HCSSSTDDLTASFSSWLASRTGA*APSVCP
Trigger: TGGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGA...GGCCAGCCAGGAGCTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp CTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGTCGGCACCTCTCCCCTaGTTCTTCCACAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LVPQLGVEVDSLRDRVDGSAPLP*FFHSFL
Trigger: GAGGAAACTGTGGAAGAACCAGGGGAGAGGTGCCGA...CCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CCA 90 bp AGCCTTGGTGGGCTATTTCTAGAAGTGACCCTGACCCTGTGTGCTGTTGGCGCCTGCCCCCTTGTTCACTaGGAAGTCCCTGGTGTGACT +
Preference number: 4 (lower is better)
Translates to: SLGGLFLEVTLTLCAVGACPLVH*EVPGVT
Trigger: AGTCACACCAGGGACTTCCCAGTGAACAAGGGGGCA...GGCGCCAACAGCACACAGGGTCAGGGTCACTTCTAGAAATAGCCCACCAAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp TGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGTTCCAGGACTGGGGATaGAGCAGTGCTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WADYDTGGSWSKDPRWGLFQDWG*SSAGSS
Trigger: GGAAGAACCAGCACTGCTCCATCCCCAGTCCTGGAA...CAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351606.10
CDS-3UTR TCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCCATCCCCAGGAGACCTaGCAGGACAGAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRHPQET*QDRGNS
Trigger: GCTGTTTCCTCTGTCCTGTCAGGTCTCCTGGGGATG...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000651961.1
CDS-3UTR TCA 90 bp AGCCTTGGTGGGCTATTTCTAGAAGTGACCCTGACCCTGTGTGCTGTTGGCGCCCGTACCATGGAAAGTTaGGCCACAGTCACACTACCG +
Preference number: 4 (lower is better)
Translates to: SLGGLFLEVTLTLCAVGARTMES*ATVTLP
Trigger: CGGTAGTGTGACTGTGGCTCAACTTTCCATGGTACG...GGCGCCAACAGCACACAGGGTCAGGGTCACTTCTAGAAATAGCCCACCAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAGACAGGCCCGGTGTGTaGTGTTCCCCACCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQDRPGV*CSPPCV
Trigger: GACACAGGGTGGGGAACATCACACACCGGGCCTGTC...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCGATAGGAGTGTCCGCTaGCCAGAGAAGGCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRDRSVR*PEKAFE
Trigger: CTCGAAGGCCTTCTCTGGCCAGCGGACACTCCTATC...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTTCTCGCACAGGGGCTTaGGCACCTTCTGTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTSRTGA*APSVCP
Trigger: TGGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGA...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp AGCCTTGGTGGGCTATTTCTAGAAGTGACCCTGACCCTGTGTGCTGTTGGCGCCTCCATCCAGGGACACTaGCATGTCAAAGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: SLGGLFLEVTLTLCAVGASIQGH*HVKALG
Trigger: GCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGA...GGCGCCAACAGCACACAGGGTCAGGGTCACTTCTAGAAATAGCCCACCAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTTCAAAGGACCCACGGTaGGGGCTGCACTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTSKDPR*GLHLTA
Trigger: GGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGA...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCAAAGGCGCTCAGTTTaGGCCCACAGGCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTQRRSV*AHRQGS
Trigger: GGAACCCTGCCTGTGGGCTCAAACTGAGCGCCTTTG...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000651961.1
CDS-3UTR TCA 90 bp CTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGGCTCCATCTCCTGGGTaGGGCAAACATTTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: LVPQLGVEVDSLRDRVDGAPSPG*GKHFES
Trigger: TGACTCAAAATGTTTGCCTCACCCAGGAGATGGAGC...CCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351606.10
CDS-3UTR GCA 90 bp CAAGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACACAGGATAGCCACATaGCACTCCGGAAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: QDGAVEEKRAVAPRNPLGHRIAT*HSGSSG
Trigger: TCCGGAGCTTCCGGAGTGGCATGTGGCTATCCTGTG...TCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR GCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTACACAGGATAGCCACATaGCACTCCGGAAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLHRIAT*HSGSSG
Trigger: TCCGGAGCTTCCGGAGTGGCATGTGGCTATCCTGTG...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR GCA 90 bp CTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCTGGGGATGGAGCAGTaGTGGTTCTTCCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: LLLSAPGWPLFEIPCSAALGMEQ*WFFHSF
Trigger: GAAACTGTGGAAGAACCAGCACTGCTCCATCCCCAG...AGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351606.10
CDS-3UTR GCA 90 bp GTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTCACACTCCTCTCCCCTTTTGCTaGCGCTGTACCACTGGACCG +
Preference number: 4 (lower is better)
Translates to: VTSRTIRAYHGKLSHSHTPLPFC*RCTTGP
Trigger: CGGTCCAGTGGTACAGCGGCAGCAAAAGGGGAGAGG...AGTGTGACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651961.1
CDS-3UTR GCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTGCACCTCTCCCCTTTTaGTGCCGCTGTACCACTGGA +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTAPLPF*CRCTTG
Trigger: TCCAGTGGTACAGCGGCAGCAAAAGGGGAGAGGTGC...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGGCTCCATCTTGGCCATaGTCAGCGTCTTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QSGWADYDTGGSWSKDPRAPSWP*SASCSL
Trigger: CAAGCTGCAAGACGCTGACCATGGCCAAGATGGAGC...CCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAGATAGGAGTGTCCGCTaGCCAGAGAAGGCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLDRSVR*PEKAFE
Trigger: CTCGAAGGCCTTCTCTGGCCAGCGGACACTCCTATC...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CAAGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGAGATAGGAGTGTCCGCTaGCCAGAGAAGGCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: QDGAVEEKRAVAPRNPLGDRSVR*PEKAFE
Trigger: CTCGAAGGCCTTCTCTGGCCAGCGGACACTCCTATC...TCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCTCTCGCACAGGGGCTTaGGCACCTTCTGTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTSRTGA*APSVCP
Trigger: TGGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGA...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp TGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCGCATGTCAAAGCACTTaGCTGCCAGACCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: CFFQLLAGPSLKSLVPQLACQST*LPDLSR
Trigger: GCGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGC...GAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp AGCCTTGGTGGGCTATTTCTAGAAGTGACCCTGACCCTGTGTGCTGTTGGCGCCGTACCACCTCCTGGGTaGATGTGTTGGTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLGGLFLEVTLTLCAVGAVPPPG*MCWYLH
Trigger: ATGGAGATACCAACACATCCACCCAGGAGGTGGTAC...GGCGCCAACAGCACACAGGGTCAGGGTCACTTCTAGAAATAGCCCACCAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTCGGCACCTCTCCCCTaGTTCTTCCACAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRSAPLP*FFHSFL
Trigger: GAGGAAACTGTGGAAGAACCAGGGGAGAGGTGCCGA...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
CDS-3UTR CCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCTCAAAGGACCCACGGTaGGGGCTGCACTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTSKDPR*GLHLTA
Trigger: GGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGA...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAATCAAAGGACCCACGGTaGGGGCTGCACTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQSKDPR*GLHLTA
Trigger: GGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGA...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CACTGCTCTTCCTCTACAGATGACCTAACTGCTTCTTTCAGCTCCTGGCTGGCCGATACTGGTGGTAGCTaGTCAAAGGACCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: HCSSSTDDLTASFSSWLADTGGS*SKDPRW
Trigger: CCACCGTGGGTCCTTTGACCAGCTACCACCAGTATC...GGCCAGCCAGGAGCTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCGATACTGGTGGTAGCTaGTCAAAGGACCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRDTGGS*SKDPRW
Trigger: CCACCGTGGGTCCTTTGACCAGCTACCACCAGTATC...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTCCAGGACTGGGGATaGAGCAGTGCTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRFQDWG*SSAGSS
Trigger: GGAAGAACCAGCACTGCTCCATCCCCAGTCCTGGAA...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CCTAACTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGGAGAGTGGGGTGACATaGGCCTTGCAACGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PNCFFQLLAGPSLKSLVPESGVT*ALQRGK
Trigger: TTTGCCACGTTGCAAGGCCCATGTCACCCCACTCTC...CGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAGTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp CAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGCTCCAAATCGGAGAGTaGGGTGACATGGGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: QSGWADYDTGGSWSKDPRLQIGE*GDMGLA
Trigger: TGCAAGGCCCATGTCACCCCACTCTCCGATTTGGAG...CCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp CACTGCTCTTCCTCTACAGATGACCTAACTGCTTCTTTCAGCTCCTGGCTGGCCCTCCAAATCGGAGAGTaGGGTGACATGGGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: HCSSSTDDLTASFSSWLALQIGE*GDMGLA
Trigger: TGCAAGGCCCATGTCACCCCACTCTCCGATTTGGAG...GGCCAGCCAGGAGCTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
3UTR CAA 72 bp CCTAACTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTaGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PNCFFQLLAGPS*KSLVPQLGVEV
Trigger: GACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAGTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp TATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACACAAACCAGTAGTTGCTaGGCAGGGATGTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: YDTGGSWSKDPRWGLHLTQTSSC*AGMLWR
Trigger: TCTCCACAACATCCCTGCTCAGCAACTACTGGTTTG...TGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp GAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGAAGTCCGATGTAGGTaGTCTGCGTTCCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: EIPCSAARSRSRLPQRQSEVRCR*SAFPGI
Trigger: TATCCCTGGGAACGCAGATCACCTACATCGGACTTC...ACTCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp TATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAAGGCAGGGTTCCCAGTaGGTAGCAAGTCTGTTAGTA +
Preference number: 4 (lower is better)
Translates to: YDTGGSWSKDPRWGLHLTRQGSQ*VASLLV
Trigger: TACTAACAGACTTGCTACTCACTGGGAACCCTGCCT...TGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCATCCCCAGGAGACCTaGCAGGACAGAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTHPQET*QDRGNS
Trigger: GCTGTTTCCTCTGTCCTGTCAGGTCTCCTGGGGATG...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000651961.1
CDS-3UTR TCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAACATCCCCAGGAGACCTaGCAGGACAGAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQHPQET*QDRGNS
Trigger: GCTGTTTCCTCTGTCCTGTCAGGTCTCCTGGGGATG...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000651961.1
CDS-3UTR TCA 90 bp AGCTTCATCCATGTCCCTACAAAGGGCATAAACTCATCCTTCTTTATGGCTGCAGGTGGGGGCTGCACTTaGCAGCCGCCGAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: SFIHVPTKGINSSFFMAAGGGCT*QPPRET
Trigger: TGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACC...TGCAGCCATAAAGAAGGATGAGTTTATGCCCTTTGTAGGGACATGGATGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp CCTAACTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCCGAAGGATGCCATCTaGACTCCAAGTCCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PNCFFQLLAGPSLKSLVPPKDAI*TPSPFG
Trigger: ACCAAAGGGACTTGGAGTGCAGATGGCATCCTTCGG...CGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAGTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR GCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTGGGCACCTTCTGTGTaGCCACAAACCAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRWAPSV*PQTSSC
Trigger: GCAACTACTGGTTTGTGGGCACACAGAAGGTGCCCA...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR GCA 90 bp CACTGGGAAGTCCCTGGTGTGACTGTCCAGAAGGGAACCACAGTCCAATCTGAAGTCAAAGCACTTGGCTaGCAGACCTTTCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: HWEVPGVTVQKGTTVQSEVKALG*QTFLAQ
Trigger: CTGTGCGAGAAAGGTCTGGCAGCCAAGTGCTTTGAC...TTCAGATTGGACTGTGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAACACAGGATAGCCACATaGCACTCCGGAAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQHRIAT*HSGSSG
Trigger: TCCGGAGCTTCCGGAGTGGCATGTGGCTATCCTGTG...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR GCA 90 bp CAAGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACCAGAGAGGAGCCTATaGCCCCTTGTTCACTGGGAA +
Preference number: 4 (lower is better)
Translates to: QDGAVEEKRAVAPRNPLGPERSL*PLVHWE
Trigger: TTCCCAGTGAACAAGGGGGCATAGGCTCCTCTCTGG...TCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp CAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTCGCTCATTCACTCTTaGAGCGGGAAGGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QSGWADYDTGGSWSKDPRSLIHS*SGKAEK
Trigger: CTTCTCTGCCTTCCCGCTGCAAGAGTGAATGAGCGA...CCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351606.10
CDS-3UTR GCA 90 bp CCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTGCACCTCTCCCCTTTTaGTGCCGCTGTACCACTGGA +
Preference number: 4 (lower is better)
Translates to: PSVTSRTIRAYHGKLSHSAPLPF*CRCTTG
Trigger: TCCAGTGGTACAGCGGCAGCAAAAGGGGAGAGGTGC...ACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651961.1
CDS-3UTR GCA 90 bp TGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCTCATGATTAAATGCTaGCTTACAGGGAACACGGGC +
Preference number: 4 (lower is better)
Translates to: WADYDTGGSWSKDPRWGLLMIKC*LTGNTG
Trigger: GCCCGTGTTCCCTGTAAGGCAGCATTTAATCATGAG...CAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CCA 90 bp AGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTCGAGAGCTCCATCTTaGCCATGGTCAGCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: RWSCRGKESSGTQESLRTSRAPS*PWSASC
Trigger: GCAAGACGCTGACCATGGCCAAGATGGAGCTCTCGA...AGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
CDS-3UTR CCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTTCGAGAGCTCCATCTTaGCCATGGTCAGCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTSRAPS*PWSASC
Trigger: GCAAGACGCTGACCATGGCCAAGATGGAGCTCTCGA...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000537302.5
CDS-3UTR CCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTATCGAGAGCTCCATCTTaGCCATGGTCAGCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLSRAPS*PWSASC
Trigger: GCAAGACGCTGACCATGGCCAAGATGGAGCTCTCGA...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000537302.5
CDS-3UTR CCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCGATAGGAGTGTCCGCTaGCCAGAGAAGGCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTDRSVR*PEKAFE
Trigger: CTCGAAGGCCTTCTCTGGCCAGCGGACACTCCTATC...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CCTAACTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGGCATGTCAAAGCACTTaGCTGCCAGACCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: PNCFFQLLAGPSLKSLVPACQST*LPDLSR
Trigger: GCGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGC...CGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAGTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTCCATCCAGGGACACTaGCATGTCAAAGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRSIQGH*HVKALG
Trigger: GCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGA...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGCCTGGGTGGATGTGTTaGTATCTCCATCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: QSGWADYDTGGSWSKDPRPGWMC*YLHPGT
Trigger: TGTCCCTGGATGGAGATACCAACACATCCACCCAGG...CCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp CCTAACTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCCTGGGTGGATGTGTTaGTATCTCCATCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: PNCFFQLLAGPSLKSLVPPGWMC*YLHPGT
Trigger: TGTCCCTGGATGGAGATACCAACACATCCACCCAGG...CGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAGTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTTCGGCACCTCTCCCCTaGTTCTTCCACAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTSAPLP*FFHSFL
Trigger: GAGGAAACTGTGGAAGAACCAGGGGAGAGGTGCCGA...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
CDS-3UTR CCA 90 bp TGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCTGTGAATACATCATGTaGGCCACCATCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: CFFQLLAGPSLKSLVPQLCEYIM*ATIPRR
Trigger: TCTCCTGGGGATGGTGGCCCACATGATGTATTCACA...GAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTGGTCTCCAGTCTTCTaGACCCAAGTTGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRWSPVF*TQVDSR
Trigger: GCGACTGTCAACTTGGGTCCAGAAGACTGGAGACCA...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTGATACTGGTGGTAGCTaGTCAAAGGACCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTDTGGS*SKDPRW
Trigger: CCACCGTGGGTCCTTTGACCAGCTACCACCAGTATC...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAGATACTGGTGGTAGCTaGTCAAAGGACCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLDTGGS*SKDPRW
Trigger: CCACCGTGGGTCCTTTGACCAGCTACCACCAGTATC...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCCTTTCAGCTCCTGGCTaGCCCCTCTTTGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRLSAPG*PLFEIP
Trigger: AGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAG...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CCTAACTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGGGGATGGAGCAGTGCTaGTTCTTCCACAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PNCFFQLLAGPSLKSLVPGMEQC*FFHSFL
Trigger: GAGGAAACTGTGGAAGAACCAGCACTGCTCCATCCC...CGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAGTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351606.10
CDS-3UTR CCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCGGGATGGAGCAGTGCTaGTTCTTCCACAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRGMEQC*FFHSFL
Trigger: GAGGAAACTGTGGAAGAACCAGCACTGCTCCATCCC...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAATGGGCCTTGCAACGTaGCAAATTCCAGTAGTCCTT +
Preference number: 4 (lower is better)
Translates to: QLLAGPSLKSLVPQLGVEMGLAT*QIPVVL
Trigger: AAGGACTACTGGAATTTGCCACGTTGCAAGGCCCAT...TTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCCAAACCAGTAGTTGCTaGGCAGGGATGTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRQTSSC*AGMLWR
Trigger: TCTCCACAACATCCCTGCTCAGCAACTACTGGTTTG...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCCTTCTGGACCCAAGTTaGCAGTCGCTTGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRLLDPS*QSLGRL
Trigger: AAGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAG...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTACTATGCTTGCACTTaGACTCCAGCACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRYYACT*TPAPSW
Trigger: CCAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTA...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp CTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGCTCTTCCTCTACAGATaGCCTAACTGCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LVPQLGVEVDSLRDRVDGLFLYR*PNCFFQ
Trigger: CTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAG...CCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR GCA 90 bp CTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGAGGAAGAACCGAAGGATaGCATCTGCACTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LFEIPCSAARSRSRLPQRGRTEG*HLHSKS
Trigger: GGACTTGGAGTGCAGATGGCATCCTTCGGTTCTTCC...TCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR GCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTATGGGCACCTTCTGTGTaGCCACAAACCAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLWAPSV*PQTSSC
Trigger: GCAACTACTGGTTTGTGGGCACACAGAAGGTGCCCA...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR GCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAGTCAAAGCACTTGGCTaGCAGACCTTTCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLVKALG*QTFLAQ
Trigger: CTGTGCGAGAAAGGTCTGGCAGCCAAGTGCTTTGAC...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR GCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTGTCAAAGCACTTGGCTaGCAGACCTTTCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTVKALG*QTFLAQ
Trigger: CTGTGCGAGAAAGGTCTGGCAGCCAAGTGCTTTGAC...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR GCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCAATCAGGTCCCCTCTTaGCAGCAGAGGGGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTNQVPS*QQRGKV
Trigger: CACCTTACCCCTCTGCTGGCAAGAGGGGACCTGATT...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000651961.1
CDS-3UTR GCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTCTGGGGATGGAGCAGTaGTGGTTCTTCCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTLGMEQ*WFFHSF
Trigger: GAAACTGTGGAAGAACCAGCACTGCTCCATCCCCAG...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000537302.5
ENST00000651961.1
CDS-3UTR GCA 90 bp CCACGGTGGGGGCTGCACTTGACAGCCGCCGAGGGAAACACTGATGGTGATGTGTCATATTCTTTGGAGTaGCTCATGATTAAATGCTGC +
Preference number: 4 (lower is better)
Translates to: PRWGLHLTAAEGNTDGDVSYSLE*LMIKCC
Trigger: GCAGCATTTAATCATGAGGCACTCCAAAGAATATGA...CACATCACCATCAGTGTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CCA 90 bp CACTGCTCTTCCTCTACAGATGACCTAACTGCTTCTTTCAGCTCCTGGCTGGCCGTCTTGCAGCTTGTCTaGAAGAACCGAAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: HCSSSTDDLTASFSSWLAVLQLV*KNRRMP
Trigger: TGGCATCCTTCGGTTCTTCCAGACAAGCTGCAAGAC...GGCCAGCCAGGAGCTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCGTCTTGCAGCTTGTCTaGAAGAACCGAAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRVLQLV*KNRRMP
Trigger: TGGCATCCTTCGGTTCTTCCAGACAAGCTGCAAGAC...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000537302.5
CDS-3UTR CCA 90 bp ATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGGACACTGTCCCAGGCAGGCTCCATCTTGGCCATaGTCAGCGTCTTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ITLLLGTYCVDAGHCPRQAPSWP*SASCSL
Trigger: CAAGCTGCAAGACGCTGACCATGGCCAAGATGGAGC...CTGCCTGGGACAGTGTCCTGCATCCACACAGTAGGTACCCAGTAAAAGTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337630.10
CDS-3UTR CCA 90 bp GTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACTCTCGCACAGGGGCTTaGGCACCTTCTGTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: VEEKRAVAPRNPLGLKDNSRTGA*APSVCP
Trigger: TGGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGA...GTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp TCCTTTGGGTATCTACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGGTCTCGCACAGGGGCTTaGGCACCTTCTGTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SFGYLPSNGMAGSNGISRSRTGA*APSVCP
Trigger: TGGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGA...CCTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTAGATACCCAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTGCATGTCAAAGCACTTaGCTGCCAGACCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTACQST*LPDLSR
Trigger: GCGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGC...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTTCCATCCAGGGACACTaGCATGTCAAAGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTSIQGH*HVKALG
Trigger: GCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGA...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTATCCATCCAGGGACACTaGCATGTCAAAGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLSIQGH*HVKALG
Trigger: GCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGA...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTCCTGGGTGGATGTGTTaGTATCTCCATCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTPGWMC*YLHPGT
Trigger: TGTCCCTGGATGGAGATACCAACACATCCACCCAGG...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCGTACCACCTCCTGGGTaGATGTGTTGGTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRVPPPG*MCWYLH
Trigger: ATGGAGATACCAACACATCCACCCAGGAGGTGGTAC...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAATATTGTACCACCTCCTaGGTGGATGTGTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: QLLAGPSLKSLVPQLGVEYCTTS*VDVLVS
Trigger: AGATACCAACACATCCACCCAGGAGGTGGTACAATA...TTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp CTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGATGGTCTCCAGTCTTCTaGACCCAAGTTGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: LFEIPCSAARSRSRLPQRWSPVF*TQVDSR
Trigger: GCGACTGTCAACTTGGGTCCAGAAGACTGGAGACCA...TCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp GTCTTCCCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCGATACTGGTGGTAGCTaGTCAAAGGACCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: VFPSVTSRTIRAYHGKLSDTGGS*SKDPRW
Trigger: CCACCGTGGGTCCTTTGACCAGCTACCACCAGTATC...GCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGGGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp CAAGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTTCAGCTCCTGGCTaGCCCCTCTTTGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: QDGAVEEKRAVAPRNPLGLSAPG*PLFEIP
Trigger: AGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAG...TCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp TTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGACTTTCAGCTCCTGGCTaGCCCCTCTTTGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: LKSLVPQLGVEVDSLRDRLSAPG*PLFEIP
Trigger: AGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAG...TCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTCTTTCAGCTCCTGGCTaGCCCCTCTTTGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTLSAPG*PLFEIP
Trigger: AGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAG...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAATTCCAGGACTGGGGATaGAGCAGTGCTGGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQFQDWG*SSAGSS
Trigger: GGAAGAACCAGCACTGCTCCATCCCCAGTCCTGGAA...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CCTAACTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGAATTGTTTCCAGGACTaGGGATGGAGCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PNCFFQLLAGPSLKSLVPNCFQD*GWSSAG
Trigger: ACCAGCACTGCTCCATCCCCAGTCCTGGAAACAATT...CGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAGTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351606.10
CDS-3UTR TCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTACAAACCAGTAGTTGCTaGGCAGGGATGTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLQTSSC*AGMLWR
Trigger: TCTCCACAACATCCCTGCTCAGCAACTACTGGTTTG...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp ATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGGACACTGTCCCAGGCAGGAAGTCCGATGTAGGTaGTCTGCGTTCCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: ITLLLGTYCVDAGHCPRQEVRCR*SAFPGI
Trigger: TATCCCTGGGAACGCAGATCACCTACATCGGACTTC...CTGCCTGGGACAGTGTCCTGCATCCACACAGTAGGTACCCAGTAAAAGTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCGAAGTCCGATGTAGGTaGTCTGCGTTCCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTEVRCR*SAFPGI
Trigger: TATCCCTGGGAACGCAGATCACCTACATCGGACTTC...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000651961.1
CDS-3UTR TCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAGAAGTCCGATGTAGGTaGTCTGCGTTCCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQEVRCR*SAFPGI
Trigger: TATCCCTGGGAACGCAGATCACCTACATCGGACTTC...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000651961.1
CDS-3UTR TCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAAGGCAGGGTTCCCAGTaGGTAGCAAGTCTGTTAGTA +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLRQGSQ*VASLLV
Trigger: TACTAACAGACTTGCTACTCACTGGGAACCCTGCCT...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000651961.1
CDS-3UTR TCA 90 bp GTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCATCCCCAGGAGACCTaGCAGGACAGAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: VEEKRAVAPRNPLGLKDNHPQET*QDRGNS
Trigger: GCTGTTTCCTCTGTCCTGTCAGGTCTCCTGGGGATG...GTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000651961.1
CDS-3UTR TCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTACTTCTGGACCCAAGTTaGCAGTCGCTTGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLLLDPS*QSLGRL
Trigger: AAGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAG...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTCTTCTGGACCCAAGTTaGCAGTCGCTTGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTLLDPS*QSLGRL
Trigger: AAGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAG...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp TTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGATACTATGCTTGCACTTaGACTCCAGCACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LKSLVPQLGVEVDSLRDRYYACT*TPAPSW
Trigger: CCAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTA...TCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTATACTATGCTTGCACTTaGACTCCAGCACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLYYACT*TPAPSW
Trigger: CCAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTA...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp TATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAAGTTCGGGTTTTCCTTaGAGCTCTTACTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: YDTGGSWSKDPRWGLHLTSSGFP*SSYYAC
Trigger: GCAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACT...TGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR GCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCCATGGTCAGCGTCTTaGAGCTTGTCTGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTPWSAS*SLSGRT
Trigger: GGTTCTTCCAGACAAGCTGCAAGACGCTGACCATGG...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000537302.5
CDS-3UTR GCA 90 bp GTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTCACACTTGGGCACCTTCTGTGTaGCCACAAACCAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: VTSRTIRAYHGKLSHSHTWAPSV*PQTSSC
Trigger: GCAACTACTGGTTTGTGGGCACACAGAAGGTGCCCA...AGTGTGACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp CTCAGAGACAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGTGGGCACCTTCTGTGTaGCCACAAACCAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LRDRVDGLIMILVVAGQRWAPSV*PQTSSC
Trigger: GCAACTACTGGTTTGTGGGCACACAGAAGGTGCCCA...CCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTGTCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR GCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAATGGGCACCTTCTGTGTaGCCACAAACCAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQWAPSV*PQTSSC
Trigger: GCAACTACTGGTTTGTGGGCACACAGAAGGTGCCCA...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR GCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCTGGGCACCTTCTGTGTaGCCACAAACCAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTWAPSV*PQTSSC
Trigger: GCAACTACTGGTTTGTGGGCACACAGAAGGTGCCCA...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR GCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCGTCAAAGCACTTGGCTaGCAGACCTTTCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTVKALG*QTFLAQ
Trigger: CTGTGCGAGAAAGGTCTGGCAGCCAAGTGCTTTGAC...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR GCA 90 bp GTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCACAGGATAGCCACATaGCACTCCGGAAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: VEEKRAVAPRNPLGLKDNHRIAT*HSGSSG
Trigger: TCCGGAGCTTCCGGAGTGGCATGTGGCTATCCTGTG...GTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR GCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAATCGCTCATTCACTCTTaGAGCGGGAAGGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQSLIHS*SGKAEK
Trigger: CTTCTCTGCCTTCCCGCTGCAAGAGTGAATGAGCGA...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000651961.1
CDS-3UTR CCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCGCATGTCAAAGCACTTaGCTGCCAGACCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTACQST*LPDLSR
Trigger: GCGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGC...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp TCCCTCAGAGACAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAATCCATCCAGGGACACTaGCATGTCAAAGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: SLRDRVDGLIMILVVAGQSIQGH*HVKALG
Trigger: GCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGA...TTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTGTCTCTGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCCTGGGTGGATGTGTTaGTATCTCCATCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTPGWMC*YLHPGT
Trigger: TGTCCCTGGATGGAGATACCAACACATCCACCCAGG...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTGTACCACCTCCTGGGTaGATGTGTTGGTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTVPPPG*MCWYLH
Trigger: ATGGAGATACCAACACATCCACCCAGGAGGTGGTAC...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAGTACCACCTCCTGGGTaGATGTGTTGGTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLVPPPG*MCWYLH
Trigger: ATGGAGATACCAACACATCCACCCAGGAGGTGGTAC...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTATGTGAATACATCATGTaGGCCACCATCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLCEYIM*ATIPRR
Trigger: TCTCCTGGGGATGGTGGCCCACATGATGTATTCACA...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CAAGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGATGTGAATACATCATGTaGGCCACCATCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QDGAVEEKRAVAPRNPLGCEYIM*ATIPRR
Trigger: TCTCCTGGGGATGGTGGCCCACATGATGTATTCACA...TCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCTGGTCTCCAGTCTTCTaGACCCAAGTTGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTWSPVF*TQVDSR
Trigger: GCGACTGTCAACTTGGGTCCAGAAGACTGGAGACCA...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAATGGTCTCCAGTCTTCTaGACCCAAGTTGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQWSPVF*TQVDSR
Trigger: GCGACTGTCAACTTGGGTCCAGAAGACTGGAGACCA...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp CTCAGAGACAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGCAAACCAGTAGTTGCTaGGCAGGGATGTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LRDRVDGLIMILVVAGQRQTSSC*AGMLWR
Trigger: TCTCCACAACATCCCTGCTCAGCAACTACTGGTTTG...CCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTGTCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAAGGCAGGGTTCCCAGTaGGTAGCAAGTCTGTTAGTA +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQRQGSQ*VASLLV
Trigger: TACTAACAGACTTGCTACTCACTGGGAACCCTGCCT...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000651961.1
CDS-3UTR TCA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACACAAAGGCGCTCAGTTTaGGCCCACAGGCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LFVASKNHAQETDVGLSTQRRSV*AHRQGS
Trigger: GGAACCCTGCCTGTGGGCTCAAACTGAGCGCCTTTG...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000651961.1
CDS-3UTR TCA 90 bp GTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTCACACTTACTATGCTTGCACTTaGACTCCAGCACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VTSRTIRAYHGKLSHSHTYYACT*TPAPSW
Trigger: CCAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTA...AGTGTGACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp CTCAGAGACAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGTACTATGCTTGCACTTaGACTCCAGCACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LRDRVDGLIMILVVAGQRYYACT*TPAPSW
Trigger: CCAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTA...CCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTGTCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCAGTTCGGGTTTTCCTTaGAGCTCTTACTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRSSGFP*SSYYAC
Trigger: GCAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACT...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCCTCTTCCTCTACAGATaGCCTAACTGCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRLFLYR*PNCFFQ
Trigger: CTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAG...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp CCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTCTGTCTTCCCATCTGTaGCTTCCAGAACAATTCGCG +
Preference number: 4 (lower is better)
Translates to: PSVTSRTIRAYHGKLSHSLSSHL*LPEQFA
Trigger: CGCGAATTGTTCTGGAAGTCACAGATGGGAAGACAG...ACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAACTGTCTTCCCATCTGTaGCTTCCAGAACAATTCGCG +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQLSSHL*LPEQFA
Trigger: CGCGAATTGTTCTGGAAGTCACAGATGGGAAGACAG...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAAACCACAGTCCAATCTaGATAGCCTTGGTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLNHSPI*IALVGY
Trigger: ATAGCCCACCAAGGCTATTCAGATTGGACTGTGGTT...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp AGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTAACCACAGTCCAATCTaGATAGCCTTGGTGGGCTAT +
Preference number: 4 (lower is better)
Translates to: RWSCRGKESSGTQESLRTNHSPI*IALVGY
Trigger: ATAGCCCACCAAGGCTATTCAGATTGGACTGTGGTT...AGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCAGGGAAGTCCCTGGTGTaGCTGTCCAGAAGGGAACCA +
Preference number: 4 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSGKSLV*LSRREP
Trigger: TGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCC...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCGCTCCATCTCCTGGGTaGGGCAAACATTTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTAPSPG*GKHFES
Trigger: TGACTCAAAATGTTTGCCTCACCCAGGAGATGGAGC...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000651961.1
CDS-3UTR TCA 90 bp GTCTTCCCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCGCTCCATCTCCTGGGTaGGGCAAACATTTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: VFPSVTSRTIRAYHGKLSAPSPG*GKHFES
Trigger: TGACTCAAAATGTTTGCCTCACCCAGGAGATGGAGC...GCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651961.1
CDS-3UTR TCA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCAAATCGGAGAGTGGGGTaGCATGGGCCTTGCAACGTG +
Preference number: 4 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSNRRVG*HGPCNV
Trigger: CACGTTGCAAGGCCCATGTCACCCCACTCTCCGATT...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR GCA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCACACAGGATAGCCACATaGCACTCCGGAAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSHRIAT*HSGSSG
Trigger: TCCGGAGCTTCCGGAGTGGCATGTGGCTATCCTGTG...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR GCA 90 bp CCTAACTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGTGCCTCATGATTAAATaGTGCCTTACAGGGAACACG +
Preference number: 4 (lower is better)
Translates to: PNCFFQLLAGPSLKSLVPCLMIK*CLTGNT
Trigger: CGTGTTCCCTGTAAGGCAGCATTTAATCATGAGGCA...CGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAGTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CCA 90 bp AGCTTCATCCATGTCCCTACAAAGGGCATAAACTCATCCTTCTTTATGGCTGCAGATAGGAGTGTCCGCTaGCCAGAGAAGGCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: SFIHVPTKGINSSFFMAADRSVR*PEKAFE
Trigger: CTCGAAGGCCTTCTCTGGCCAGCGGACACTCCTATC...TGCAGCCATAAAGAAGGATGAGTTTATGCCCTTTGTAGGGACATGGATGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACATCTCGCACAGGGGCTTaGGCACCTTCTGTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LFVASKNHAQETDVGLSTSRTGA*APSVCP
Trigger: TGGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGA...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp ATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGGACACTGTCCCAGGCAGGTACCACCTCCTGGGTaGATGTGTTGGTATCTCCAT +
Preference number: 4 (lower is better)
Translates to: ITLLLGTYCVDAGHCPRQVPPPG*MCWYLH
Trigger: ATGGAGATACCAACACATCCACCCAGGAGGTGGTAC...CTGCCTGGGACAGTGTCCTGCATCCACACAGTAGGTACCCAGTAAAAGTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp CTCAGAGACAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGTGTGAATACATCATGTaGGCCACCATCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LRDRVDGLIMILVVAGQRCEYIM*ATIPRR
Trigger: TCTCCTGGGGATGGTGGCCCACATGATGTATTCACA...CCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTGTCTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAATGTGAATACATCATGTaGGCCACCATCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQCEYIM*ATIPRR
Trigger: TCTCCTGGGGATGGTGGCCCACATGATGTATTCACA...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp GTCTTCCCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCTGTGAATACATCATGTaGGCCACCATCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VFPSVTSRTIRAYHGKLSCEYIM*ATIPRR
Trigger: TCTCCTGGGGATGGTGGCCCACATGATGTATTCACA...GCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCGTGGGTGAAACAAGATaGAGCTGTAGAGGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRVGETR*SCRGKE
Trigger: CTCTTTTCCTCTACAGCTCCATCTTGTTTCACCCAC...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp CCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTGACCCTGTGTGCTGTTaGCGCCTTCTCATGTTAAAC +
Preference number: 4 (lower is better)
Translates to: PSVTSRTIRAYHGKLSHSDPVCC*RLLMLN
Trigger: GTTTAACATGAGAAGGCGCCAACAGCACACAGGGTC...ACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCAATTGTTTCCAGGACTaGGGATGGAGCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTNCFQD*GWSSAG
Trigger: ACCAGCACTGCTCCATCCCCAGTCCTGGAAACAATT...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp TCCTTTGGGTATCTACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGGGAAGTCCGATGTAGGTaGTCTGCGTTCCCAGGGATA +
Preference number: 4 (lower is better)
Translates to: SFGYLPSNGMAGSNGISREVRCR*SAFPGI
Trigger: TATCCCTGGGAACGCAGATCACCTACATCGGACTTC...CCTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTAGATACCCAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp ATCTACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTCATCCCCAGGAGACCTaGCAGGACAGAGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: IYPVMGWLGQMVFLGLDSHPQET*QDRGNS
Trigger: GCTGTTTCCTCTGTCCTGTCAGGTCTCCTGGGGATG...AGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp CTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGAAGTTCGGGTTTTCCTTaGAGCTCTTACTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: LFEIPCSAARSRSRLPQRSSGFP*SSYYAC
Trigger: GCAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACT...TCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTAGTTCGGGTTTTCCTTaGAGCTCTTACTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTSSGFP*SSYYAC
Trigger: GCAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACT...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp CAAGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGAAGTTCGGGTTTTCCTTaGAGCTCTTACTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: QDGAVEEKRAVAPRNPLGSSGFP*SSYYAC
Trigger: GCAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACT...TCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR TCA 90 bp CTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACTCTTCCTCTACAGATaGCCTAACTGCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LFEIPCSAARSRSRLPQRLFLYR*PNCFFQ
Trigger: CTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAG...TCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR TCA 90 bp AGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTCTCTTCCTCTACAGATaGCCTAACTGCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RWSCRGKESSGTQESLRTLFLYR*PNCFFQ
Trigger: CTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAG...AGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR TCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTCTTTGGAGTGCCTCATaGTTAAATGCTGCCTTACAG +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTLWSAS*LNAALQ
Trigger: CTGTAAGGCAGCATTTAATCATGAGGCACTCCAAAG...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR GCA 90 bp CACTGGGAAGTCCCTGGTGTGACTGTCCAGAAGGGAACCACAGTCCAATCTGAATGTGGAGGACTTCTGTaGTATATGACAAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: HWEVPGVTVQKGTTVQSECGGLL*YMTKHS
Trigger: TGAGTGCTTTGTCATATAGCACAGAAGTCCTCCACA...TTCAGATTGGACTGTGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp GTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACTACCTACTGTGTGGATaGAGGACACTGTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: VEEKRAVAPRNPLGLKDNYLLCG*RTLSQA
Trigger: TGCCTGGGACAGTGTCCTGCATCCACACAGTAGGTA...GTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTACGTTAGTATATGACCCTGACCCTGTGTaGTGTTGGCGCCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLVYDPDPV*CWRLLM
Trigger: CATGAGAAGGCGCCAACAGCACACAGGGTCAGGGTC...ATATACTAACGTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp AGCCTTGGTGGGCTATTTCTAGAAGTGACCCTGACCCTGTGTGCTGTTGGCGCCTTGGTTTTCTATCCTTaGGATAGTTTGCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: SLGGLFLEVTLTLCAVGALVFYP*DSLLRM
Trigger: CATTCTGAGCAAACTATCGCAAGGATAGAAAACCAA...GGCGCCAACAGCACACAGGGTCAGGGTCACTTCTAGAAATAGCCCACCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp GTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACGCATGTCAAAGCACTTaGCTGCCAGACCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: VEEKRAVAPRNPLGLKDNACQST*LPDLSR
Trigger: GCGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGC...GTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp GTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTGGGTGGATGTGTTaGTATCTCCATCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: VEEKRAVAPRNPLGLKDNPGWMC*YLHPGT
Trigger: TGTCCCTGGATGGAGATACCAACACATCCACCCAGG...GTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTATATTGTACCACCTCCTaGGTGGATGTGTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLYCTTS*VDVLVS
Trigger: AGATACCAACACATCCACCCAGGAGGTGGTACAATA...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp ATGTTCCCCACCCTGTGTCCAAGTGTTTTTATTGTTCAATTCCCACCTGTGAGTTCGGCACCTCTCCCCTaGTTCTTCCACAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: MFPTLCPSVFIVQFPPVSSAPLP*FFHSFL
Trigger: GAGGAAACTGTGGAAGAACCAGGGGAGAGGTGCCGA...ACTCACAGGTGGGAATTGAACAATAAAAACACTTGGACACAGGGTGGGGAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337630.10
CDS-3UTR CCA 90 bp GTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACTGGTCTCCAGTCTTCTaGACCCAAGTTGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: VEEKRAVAPRNPLGLKDNWSPVF*TQVDSR
Trigger: GCGACTGTCAACTTGGGTCCAGAAGACTGGAGACCA...GTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp CACTGGGAAGTCCCTGGTGTGACTGTCCAGAAGGGAACCACAGTCCAATCTGAAATAATTCCAAACATGTaGTCTCCAGTCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: HWEVPGVTVQKGTTVQSEIIPNM*SPVFWT
Trigger: GGTCCAGAAGACTGGAGACCACATGTTTGGAATTAT...TTCAGATTGGACTGTGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp CTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCATCAAAGGACCCACGGTaGGGGCTGCACTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: LLGQYLITLLLGTYCVDASKDPR*GLHLTA
Trigger: GGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGA...TGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAGTGGGTGAAACAAGATaGAGCTGTAGAGGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLVGETR*SCRGKE
Trigger: CTCTTTTCCTCTACAGCTCCATCTTGTTTCACCCAC...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCATGCCCCCTTGTTCACTaGGAAGTCCCTGGTGTGACT +
Preference number: 4 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSCPLVH*EVPGVT
Trigger: AGTCACACCAGGGACTTCCCAGTGAACAAGGGGGCA...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR CAA 72 bp GTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTaGAGCCACAGTCACACTACCGTTAATTTGCTCACC +
Preference number: 4 (lower is better)
Translates to: VTSRTIRAYHGK*SHSHTTVNLLT
Trigger: GGTGAGCAAATTAACGGTAGTGTGACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAAGTTCGGGTTTTCCTTaGAGCTCTTACTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQSSGFP*SSYYAC
Trigger: GCAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACT...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAACTCTTCCTCTACAGATaGCCTAACTGCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQLFLYR*PNCFFQ
Trigger: CTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAG...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR TCA 90 bp GTCTTCCCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCATTTCTCAGAAGGGATaGAAAGGTGGGATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VFPSVTSRTIRAYHGKLSISQKG*KGGIQR
Trigger: TCTCTGGATCCCACCTTTTCATCCCTTCTGAGAAAT...GCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGGGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTAATCCAGTCTATCACTaGTGGACATTTGGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTNPVYH*WTFGLV
Trigger: AACCAACCCAAATGTCCATCAGTGATAGACTGGATT...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp AATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGGGTGGCATTCTTTATGACAGGCCCGGTGTGTaGTGTTCCCCACCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: NGISRSRFLRNQMGGILYDRPGV*CSPPCV
Trigger: GACACAGGGTGGGGAACATCACACACCGGGCCTGTC...ATAAAGAATGCCACCCATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCATCAGTTGGGTAGAATaGGTGTTTAGCGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTISWVE*VFSVRM
Trigger: CATCCTCACGCTAAACACTCATTCTACCCAACTGAT...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000651961.1
CDS-3UTR TCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAATCAGTTGGGTAGAATaGGTGTTTAGCGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQISWVE*VFSVRM
Trigger: CATCCTCACGCTAAACACTCATTCTACCCAACTGAT...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000651961.1
CDS-3UTR GCA 90 bp ATGTTCCCCACCCTGTGTCCAAGTGTTTTTATTGTTCAATTCCCACCTGTGAGTGGAAGAACCGAAGGATaGCATCTGCACTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: MFPTLCPSVFIVQFPPVSGRTEG*HLHSKS
Trigger: GGACTTGGAGTGCAGATGGCATCCTTCGGTTCTTCC...ACTCACAGGTGGGAATTGAACAATAAAAACACTTGGACACAGGGTGGGGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337630.10
CDS-3UTR GCA 90 bp CTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGACCCTGACCCTGTGTaGTGTTGGCGCCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: LLGQYLITLLLGTYCVDADPDPV*CWRLLM
Trigger: CATGAGAAGGCGCCAACAGCACACAGGGTCAGGGTC...TGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp ATGTTCCCCACCCTGTGTCCAAGTGTTTTTATTGTTCAATTCCCACCTGTGAGTCTGGGGATGGAGCAGTaGTGGTTCTTCCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: MFPTLCPSVFIVQFPPVSLGMEQ*WFFHSF
Trigger: GAAACTGTGGAAGAACCAGCACTGCTCCATCCCCAG...ACTCACAGGTGGGAATTGAACAATAAAAACACTTGGACACAGGGTGGGGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651961.1
CDS-3UTR CCA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCAGCATGTCAAAGCACTTaGCTGCCAGACCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSACQST*LPDLSR
Trigger: GCGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGC...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp GGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGCCTGGGTGGATGTGTTaGTATCTCCATCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GMAGSNGISRSRFLRNQMPGWMC*YLHPGT
Trigger: TGTCCCTGGATGGAGATACCAACACATCCACCCAGG...CATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAATATTGTACCACCTCCTaGGTGGATGTGTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQYCTTS*VDVLVS
Trigger: AGATACCAACACATCCACCCAGGAGGTGGTACAATA...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGAAGTTGACAGTCGCTTaGAAGACTTGTGAATACATC +
Preference number: 4 (lower is better)
Translates to: QSGWADYDTGGSWSKDPRKLTVA*KTCEYI
Trigger: GATGTATTCACAAGTCTTCCAAGCGACTGTCAACTT...CCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCAAGTTGACAGTCGCTTaGAAGACTTGTGAATACATC +
Preference number: 4 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRKLTVA*KTCEYI
Trigger: GATGTATTCACAAGTCTTCCAAGCGACTGTCAACTT...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CAAGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGAATAATTCCAAACATGTaGTCTCCAGTCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: QDGAVEEKRAVAPRNPLGIIPNM*SPVFWT
Trigger: GGTCCAGAAGACTGGAGACCACATGTTTGGAATTAT...TCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTATAATTCCAAACATGTaGTCTCCAGTCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTIIPNM*SPVFWT
Trigger: GGTCCAGAAGACTGGAGACCACATGTTTGGAATTAT...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp ATCTACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTGATACTGGTGGTAGCTaGTCAAAGGACCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: IYPVMGWLGQMVFLGLDSDTGGS*SKDPRW
Trigger: CCACCGTGGGTCCTTTGACCAGCTACCACCAGTATC...AGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCACTTTCAGCTCCTGGCTaGCCCCTCTTTGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSLSAPG*PLFEIP
Trigger: AGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAG...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp CAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTCAAGAGACGGATGTTaGCTTAAGCACATGTTGATA +
Preference number: 4 (lower is better)
Translates to: QSGWADYDTGGSWSKDPRSRDGC*LKHMLI
Trigger: TATCAACATGTGCTTAAGCCAACATCCGTCTCTTGA...CCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCGTGGGTGAAACAAGATaGAGCTGTAGAGGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTVGETR*SCRGKE
Trigger: CTCTTTTCCTCTACAGCTCCATCTTGTTTCACCCAC...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp TTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGATTCTTTTTATCTCCATaGTTTAGCCCAGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: LKSLVPQLGVEVDSLRDRFFLSP*FSPEPG
Trigger: GCCAGGTTCTGGGCTAAACCATGGAGATAAAAAGAA...TCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CCA 90 bp AGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTTCTTTTTATCTCCATaGTTTAGCCCAGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: RWSCRGKESSGTQESLRTFFLSP*FSPEPG
Trigger: GCCAGGTTCTGGGCTAAACCATGGAGATAAAAAGAA...AGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp AGCTTCATCCATGTCCCTACAAAGGGCATAAACTCATCCTTCTTTATGGCTGCAGGGATGGAGCAGTGCTaGTTCTTCCACAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SFIHVPTKGINSSFFMAAGMEQC*FFHSFL
Trigger: GAGGAAACTGTGGAAGAACCAGCACTGCTCCATCCC...TGCAGCCATAAAGAAGGATGAGTTTATGCCCTTTGTAGGGACATGGATGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651961.1
CDS-3UTR CCA 90 bp CACTGCTCTTCCTCTACAGATGACCTAACTGCTTCTTTCAGCTCCTGGCTGGCCCACTCCAAGTCCCTTTaGTTTAATGTTGCAAGAATG +
Preference number: 4 (lower is better)
Translates to: HCSSSTDDLTASFSSWLAHSKSL*FNVARM
Trigger: CATTCTTGCAACATTAAACCAAAGGGACTTGGAGTG...GGCCAGCCAGGAGCTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR TCA 90 bp AGCTTCATCCATGTCCCTACAAAGGGCATAAACTCATCCTTCTTTATGGCTGCAAGGCAGGGTTCCCAGTaGGTAGCAAGTCTGTTAGTA +
Preference number: 4 (lower is better)
Translates to: SFIHVPTKGINSSFFMAARQGSQ*VASLLV
Trigger: TACTAACAGACTTGCTACTCACTGGGAACCCTGCCT...TGCAGCCATAAAGAAGGATGAGTTTATGCCCTTTGTAGGGACATGGATGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp AATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGGGTGGCATTCTTTATCAAAGGCGCTCAGTTTaGGCCCACAGGCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: NGISRSRFLRNQMGGILYQRRSV*AHRQGS
Trigger: GGAACCCTGCCTGTGGGCTCAAACTGAGCGCCTTTG...ATAAAGAATGCCACCCATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp GGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGCTTCTGGACCCAAGTTaGCAGTCGCTTGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: GMAGSNGISRSRFLRNQMLLDPS*QSLGRL
Trigger: AAGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAG...CATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCACTTCTGGACCCAAGTTaGCAGTCGCTTGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSLLDPS*QSLGRL
Trigger: AAGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAG...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR TCA 90 bp GGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGTACTATGCTTGCACTTaGACTCCAGCACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GMAGSNGISRSRFLRNQMYYACT*TPAPSW
Trigger: CCAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTA...CATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTACGTTAGTATATCGTACCATGGAAAGTTaGGCCACAGTCACACTACCG +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLVYRTMES*ATVTLP
Trigger: CGGTAGTGTGACTGTGGCTCAACTTTCCATGGTACG...ATATACTAACGTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp ATCTACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTGACTTCTGTGCTATATaGCAAAGCACTCAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: IYPVMGWLGQMVFLGLDSDFCAI*QSTQGR
Trigger: GCGCCCCTGAGTGCTTTGTCATATAGCACAGAAGTC...AGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp CTCCTAAGGGCTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGGTCAAAGCACTTGGCTaGCAGACCTTTCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: LLRAPGTIFNNTFTGYLLVKALG*QTFLAQ
Trigger: CTGTGCGAGAAAGGTCTGGCAGCCAAGTGCTTTGAC...CAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAGCCCTTAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCTGTGGAGGACTTCTGTaGTATATGACAAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTCGGLL*YMTKHS
Trigger: TGAGTGCTTTGTCATATAGCACAGAAGTCCTCCACA...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp CTCCTAAGGGCTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTACCTACTGTGTGGATaGAGGACACTGTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLRAPGTIFNNTFTGYLLYLLCG*RTLSQA
Trigger: TGCCTGGGACAGTGTCCTGCATCCACACAGTAGGTA...CAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAGCCCTTAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp CTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCACCAGAGAGGAGCCTATaGCCCCTTGTTCACTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLGQYLITLLLGTYCVDAPERSL*PLVHWE
Trigger: TTCCCAGTGAACAAGGGGGCATAGGCTCCTCTCTGG...TGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTACGTTAGTATATTCGCTCATTCACTCTTaGAGCGGGAAGGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLVYSLIHS*SGKAEK
Trigger: CTTCTCTGCCTTCCCGCTGCAAGAGTGAATGAGCGA...ATATACTAACGTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651961.1
CDS-3UTR CCA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACATCCATCCAGGGACACTaGCATGTCAAAGCACTTGGC +
Preference number: 4 (lower is better)
Translates to: LFVASKNHAQETDVGLSTSIQGH*HVKALG
Trigger: GCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGA...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTACGTTAGTATATCCTGGGTGGATGTGTTaGTATCTCCATCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLVYPGWMC*YLHPGT
Trigger: TGTCCCTGGATGGAGATACCAACACATCCACCCAGG...ATATACTAACGTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp GGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGTGTGAATACATCATGTaGGCCACCATCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GMAGSNGISRSRFLRNQMCEYIM*ATIPRR
Trigger: TCTCCTGGGGATGGTGGCCCACATGATGTATTCACA...CATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTAAGTTGACAGTCGCTTaGAAGACTTGTGAATACATC +
Preference number: 4 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTKLTVA*KTCEYI
Trigger: GATGTATTCACAAGTCTTCCAAGCGACTGTCAACTT...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTACGTTAGTATATTGGTCTCCAGTCTTCTaGACCCAAGTTGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLVYWSPVF*TQVDSR
Trigger: GCGACTGTCAACTTGGGTCCAGAAGACTGGAGACCA...ATATACTAACGTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp CTCAGAGACAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGATAATTCCAAACATGTaGTCTCCAGTCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: LRDRVDGLIMILVVAGQRIIPNM*SPVFWT
Trigger: GGTCCAGAAGACTGGAGACCACATGTTTGGAATTAT...CCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTGTCTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp GGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGCTGATTATGATACTGATAATTCCAAACATGTaGTCTCCAGTCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: GVEVDSLRDRVDGLIMILIIPNM*SPVFWT
Trigger: GGTCCAGAAGACTGGAGACCACATGTTTGGAATTAT...CAGTATCATAATCAGCCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCATAATTCCAAACATGTaGTCTCCAGTCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTIIPNM*SPVFWT
Trigger: GGTCCAGAAGACTGGAGACCACATGTTTGGAATTAT...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CCA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACACTTTCAGCTCCTGGCTaGCCCCTCTTTGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: LFVASKNHAQETDVGLSTLSAPG*PLFEIP
Trigger: AGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAG...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp CCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTTTCTTTTTATCTCCATaGTTTAGCCCAGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: PSVTSRTIRAYHGKLSHSFFLSP*FSPEPG
Trigger: GCCAGGTTCTGGGCTAAACCATGGAGATAAAAAGAA...ACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp ATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGGACACTGTCCCAGGCAGTTCTTTTTATCTCCATaGTTTAGCCCAGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: ITLLLGTYCVDAGHCPRQFFLSP*FSPEPG
Trigger: GCCAGGTTCTGGGCTAAACCATGGAGATAAAAAGAA...CTGCCTGGGACAGTGTCCTGCATCCACACAGTAGGTACCCAGTAAAAGTGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp AGCTTCATCCATGTCCCTACAAAGGGCATAAACTCATCCTTCTTTATGGCTGCAGACCCTGTGTGCTGTTaGCGCCTTCTCATGTTAAAC +
Preference number: 4 (lower is better)
Translates to: SFIHVPTKGINSSFFMAADPVCC*RLLMLN
Trigger: GTTTAACATGAGAAGGCGCCAACAGCACACAGGGTC...TGCAGCCATAAAGAAGGATGAGTTTATGCCCTTTGTAGGGACATGGATGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACACAAACCAGTAGTTGCTaGGCAGGGATGTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LFVASKNHAQETDVGLSTQTSSC*AGMLWR
Trigger: TCTCCACAACATCCCTGCTCAGCAACTACTGGTTTG...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR TCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTACGTTAGTATATCTTCTGGACCCAAGTTaGCAGTCGCTTGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLVYLLDPS*QSLGRL
Trigger: AAGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAG...ATATACTAACGTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACATACTATGCTTGCACTTaGACTCCAGCACCATCCTGG +
Preference number: 4 (lower is better)
Translates to: LFVASKNHAQETDVGLSTYYACT*TPAPSW
Trigger: CCAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTA...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR TCA 90 bp CTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGACTTCTGTGCTATATaGCAAAGCACTCAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: LLGQYLITLLLGTYCVDADFCAI*QSTQGR
Trigger: GCGCCCCTGAGTGCTTTGTCATATAGCACAGAAGTC...TGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp CTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCATGGGCACCTTCTGTGTaGCCACAAACCAGTAGTTGC +
Preference number: 4 (lower is better)
Translates to: LLGQYLITLLLGTYCVDAWAPSV*PQTSSC
Trigger: GCAACTACTGGTTTGTGGGCACACAGAAGGTGCCCA...TGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACACTACCGTTAATTTaGTCACCTCCATTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQTLPLI*SPPFLQ
Trigger: TTGGAGAAATGGAGGTGAGCAAATTAACGGTAGTGT...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp GTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACTATTGTACCACCTCCTaGGTGGATGTGTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: VEEKRAVAPRNPLGLKDNYCTTS*VDVLVS
Trigger: AGATACCAACACATCCACCCAGGAGGTGGTACAATA...GTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp CCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTAAGTTGACAGTCGCTTaGAAGACTTGTGAATACATC +
Preference number: 4 (lower is better)
Translates to: PSVTSRTIRAYHGKLSHSKLTVA*KTCEYI
Trigger: GATGTATTCACAAGTCTTCCAAGCGACTGTCAACTT...ACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp CTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCATGGTCTCCAGTCTTCTaGACCCAAGTTGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: LLGQYLITLLLGTYCVDAWSPVF*TQVDSR
Trigger: GCGACTGTCAACTTGGGTCCAGAAGACTGGAGACCA...TGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp GGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGAATTCGCGCGTACCATaGAAAGTTGAGCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: GMAGSNGISRSRFLRNQMNSRVP*KVEPQS
Trigger: TGACTGTGGCTCAACTTTCCATGGTACGCGCGAATT...CATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAGATGGACATTTGGGTTaGTTCCAAGTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQDGHLG*FQVFAI
Trigger: AATAGCAAAGACTTGGAACCAACCCAAATGTCCATC...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp CCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGGAATTGTTTCCAGGACTaGGGATGGAGCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PGTIFNNTFTGYLLCGCRNCFQD*GWSSAG
Trigger: ACCAGCACTGCTCCATCCCCAGTCCTGGAAACAATT...CCTGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651961.1
CDS-3UTR TCA 90 bp ATGTTCCCCACCCTGTGTCCAAGTGTTTTTATTGTTCAATTCCCACCTGTGAGTCTCTTCCTCTACAGATaGCCTAACTGCTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: MFPTLCPSVFIVQFPPVSLFLYR*PNCFFQ
Trigger: CTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAG...ACTCACAGGTGGGAATTGAACAATAAAAACACTTGGACACAGGGTGGGGAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCGTCTTTATAGCAGCATaGTTTGTAATCCTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTVFIAA*FVILWV
Trigger: TACCCAAAGGATTACAAATCATGCTGCTATAAAGAC...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCAATTCCCACCTGTGAGTaGGAATATGCAGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSIPTCE*EYAVFG
Trigger: ACCAAACACTGCATATTCTCACTCACAGGTGGGAAT...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCAATCAGTTGGGTAGAATaGGTGTTTAGCGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSISWVE*VFSVRM
Trigger: CATCCTCACGCTAAACACTCATTCTACCCAACTGAT...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651961.1
CDS-3UTR GCA 90 bp GTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTCACACTTTGGTTTTCTATCCTTaGGATAGTTTGCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: VTSRTIRAYHGKLSHSHTLVFYP*DSLLRM
Trigger: CATTCTGAGCAAACTATCGCAAGGATAGAAAACCAA...AGTGTGACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp AATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGGGTGGCATTCTTTATAATCAGGTCCCCTCTTaGCAGCAGAGGGGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: NGISRSRFLRNQMGGILYNQVPS*QQRGKV
Trigger: CACCTTACCCCTCTGCTGGCAAGAGGGGACCTGATT...ATAAAGAATGCCACCCATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651961.1
CDS-3UTR GCA 90 bp TCCCTCAGAGACAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAATTAATGTTGCAAGAATaGAAACTGTCTTCCTACCCT +
Preference number: 4 (lower is better)
Translates to: SLRDRVDGLIMILVVAGQLMLQE*KLSSYP
Trigger: AGGGTAGGAAGACAGTTTGCATTCTTGCAACATTAA...TTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTGTCTCTGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CCA 90 bp GGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGTATTGTACCACCTCCTaGGTGGATGTGTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: GMAGSNGISRSRFLRNQMYCTTS*VDVLVS
Trigger: AGATACCAACACATCCACCCAGGAGGTGGTACAATA...CATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp ATCTACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTAATTCGCGCGTACCATaGAAAGTTGAGCCACAGTCA +
Preference number: 4 (lower is better)
Translates to: IYPVMGWLGQMVFLGLDSNSRVP*KVEPQS
Trigger: TGACTGTGGCTCAACTTTCCATGGTACGCGCGAATT...AGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp CATGTGCCATGTTGGTGTGCTGCACCCATTAACTCGTCATTTACGTTAGTATATATTTCTCAGAAGGGATaGAAAGGTGGGATCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HVPCWCAAPINSSFTLVYISQKG*KGGIQR
Trigger: TCTCTGGATCCCACCTTTTCATCCCTTCTGAGAAAT...ATATACTAACGTAAATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp ATGTTCCCCACCCTGTGTCCAAGTGTTTTTATTGTTCAATTCCCACCTGTGAGTAATCCAGTCTATCACTaGTGGACATTTGGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: MFPTLCPSVFIVQFPPVSNPVYH*WTFGLV
Trigger: AACCAACCCAAATGTCCATCAGTGATAGACTGGATT...ACTCACAGGTGGGAATTGAACAATAAAAACACTTGGACACAGGGTGGGGAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp CTCCTAAGGGCTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGATTCCCACCTGTGAGTaGGAATATGCAGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LLRAPGTIFNNTFTGYLLIPTCE*EYAVFG
Trigger: ACCAAACACTGCATATTCTCACTCACAGGTGGGAAT...CAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAGCCCTTAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp AATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGGGTGGCATTCTTTATCCGAAGGATGCCATCTaGACTCCAAGTCCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: NGISRSRFLRNQMGGILYPKDAI*TPSPFG
Trigger: ACCAAAGGGACTTGGAGTGCAGATGGCATCCTTCGG...ATAAAGAATGCCACCCATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337630.10
CDS-3UTR CCA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACATATTGTACCACCTCCTaGGTGGATGTGTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: LFVASKNHAQETDVGLSTYCTTS*VDVLVS
Trigger: AGATACCAACACATCCACCCAGGAGGTGGTACAATA...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CCA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACAGTGGGTGAAACAAGATaGAGCTGTAGAGGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: LFVASKNHAQETDVGLSTVGETR*SCRGKE
Trigger: CTCTTTTCCTCTACAGCTCCATCTTGTTTCACCCAC...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
3UTR CAA 72 bp CATGGAAAGTTGAGCCACAGTCACACTACCGTTAATTaGCTCACCTCCATTTCTCCAATTTCCAGACCAATA +
Preference number: 4 (lower is better)
Translates to: HGKLSHSHTTVN*LTSISPISRPI
Trigger: TATTGGTCTGGAAATTGGAGAAATGGAGGTGAGCAAATTAACGGTAGTGTGACTGTGGCTCAACTTTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp AATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGGGTGGCATTCTTTATGTCTTGCAGCTTGTCTaGAAGAACCGAAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: NGISRSRFLRNQMGGILYVLQLV*KNRRMP
Trigger: TGGCATCCTTCGGTTCTTCCAGACAAGCTGCAAGAC...ATAAAGAATGCCACCCATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337630.10
CDS-3UTR CCA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCAGATGGACATTTGGGTTaGTTCCAAGTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSDGHLG*FQVFAI
Trigger: AATAGCAAAGACTTGGAACCAACCCAAATGTCCATC...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR CAA 72 bp ATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTaGAGGAATCAGATGGGTGGCATTCTTTATGAAGGA +
Preference number: 4 (lower is better)
Translates to: MAGSNGISRSRF*RNQMGGILYEG
Trigger: TCCTTCATAAAGAATGCCACCCATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
3UTR CAA 72 bp GTTCAATTCCCACCTGTGAGTGAGAATATGCAGTGTTaGGTTTTCTATCCTTGCGATAGTTTGCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: VQFPPVSENMQC*VFYPCDSLLRM
Trigger: CATTCTGAGCAAACTATCGCAAGGATAGAAAACCAAACACTGCATATTCTCACTCACAGGTGGGAATTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR GCA 90 bp CTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCAACACTACCGTTAATTTaGTCACCTCCATTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LLGQYLITLLLGTYCVDATLPLI*SPPFLQ
Trigger: TTGGAGAAATGGAGGTGAGCAAATTAACGGTAGTGT...TGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp CTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCAAAGTTGACAGTCGCTTaGAAGACTTGTGAATACATC +
Preference number: 4 (lower is better)
Translates to: LLGQYLITLLLGTYCVDAKLTVA*KTCEYI
Trigger: GATGTATTCACAAGTCTTCCAAGCGACTGTCAACTT...TGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR TCA 90 bp CTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGTCTTTATAGCAGCATaGTTTGTAATCCTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: LLGQYLITLLLGTYCVDAVFIAA*FVILWV
Trigger: TACCCAAAGGATTACAAATCATGCTGCTATAAAGAC...TGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CCA 90 bp AATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGGGTGGCATTCTTTATTCAAGAGACGGATGTTaGCTTAAGCACATGTTGATA +
Preference number: 4 (lower is better)
Translates to: NGISRSRFLRNQMGGILYSRDGC*LKHMLI
Trigger: TATCAACATGTGCTTAAGCCAACATCCGTCTCTTGA...ATAAAGAATGCCACCCATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp GGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAGCCGCCGAGCGGTGGGGGCTGCACTaGACAGCCGCCGAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: GGSWSKDPRWGLHLTAAERWGLH*TAAEGN
Trigger: GTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCG...CTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp GGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAGCCGCCGAGTTCGAGAGCTCCATCTaGGCCATGGTCAGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: GGSWSKDPRWGLHLTAAEFESSI*AMVSVL
Trigger: CAAGACGCTGACCATGGCCAAGATGGAGCTCTCGAA...CTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CAA 90 bp CAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAACGGTGGGGGCTGCACTaGACAGCCGCCGAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: QLLAGPSLKSLVPQLGVERWGLH*TAAEGN
Trigger: GTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCG...TTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp CAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGGCACCTCTCCCCTTTaGCTGCCGCTGTACCACTGG +
Preference number: 5 (lower is better)
Translates to: QLLAGPSLKSLVPQLGVEGTSPL*LPLYHW
Trigger: CCAGTGGTACAGCGGCAGCAAAAGGGGAGAGGTGCC...TTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351606.10
CDS-3UTR CAA 90 bp CTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTTTCTCGCACAGGGGCTaGGGCACCTTCTGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: LLLSAPGWPLFEIPCSAAFSHRG*GTFCVP
Trigger: GGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGAA...AGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp CTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGGCAAAGGCGCTCAGTTaGAGCCCACAGGCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: LVPQLGVEVDSLRDRVDGAKALS*SPQAGF
Trigger: GAACCCTGCCTGTGGGCTCAAACTGAGCGCCTTTGC...CCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTCGGTGGGGGCTGCACTaGACAGCCGCCGAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTRWGLH*TAAEGN
Trigger: GTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCG...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS GCA 90 bp ACCTCTCCCCTGGTTCTTCCACAGTTTCCTCACAGGATAGCCACATaGCACTCCGGAAGCTCCGGAAGGAGAACCGGTCATCCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: TSPLVLPQFPHRIAT*HSGSSGRRTGHPQS
Trigger: AGACTGGGGATGACCGGTTCTCCTTCCGGAGCTTCCGGAGTGGCATGTGGCTATCCTGTGAGGAAACTGTGGAAGAACCAGGGGAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000545401.5
CDS GCA 90 bp GGAGCAGTGCTGGTTCTTCCACAGTTTCCTCACAGGATAGCCACATaGCACTCCGGAAGCTCCGGAAGGAGAACCGGTCATCCCCAGTCT +
Preference number: 5 (lower is better)
Translates to: GAVLVLPQFPHRIAT*HSGSSGRRTGHPQS
Trigger: AGACTGGGGATGACCGGTTCTCCTTCCGGAGCTTCCGGAGTGGCATGTGGCTATCCTGTGAGGAAACTGTGGAAGAACCAGCACTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp AGCTGGTCAAAGGACCCACGGTGGGGGCTGCACTTGACAGCCGCCGAGGGAAACAAGCTCTTACTATGCTaGCACTTGAACTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: SWSKDPRWGLHLTAAEGNKLLLC*HLNSST
Trigger: GGTGCTGGAGTTCAAGTGCAAGCATAGTAAGAGCTT...GTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCGTGGGTCCTTTGACCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp CTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGGGGGTGACATGGGCCTaGCAACGTGGCAAATTCCAG +
Preference number: 5 (lower is better)
Translates to: LVPQLGVEVDSLRDRVDGGVTWA*QRGKFQ
Trigger: CTGGAATTTGCCACGTTGCAAGGCCCATGTCACCCC...CCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS CCA 90 bp AAGCTGAGTGATAGCATGCTGAGGATGGCAGATAGGAGTGTCCGCTaGCCAGAGAAGGCCTTCGAGAGCTCCATCTTGGCCATGGTCAGC +
Preference number: 5 (lower is better)
Translates to: KLSDSMLRMADRSVR*PEKAFESSILAMVS
Trigger: GCTGACCATGGCCAAGATGGAGCTCTCGAAGGCCTTCTCTGGCCAGCGGACACTCCTATCTGCCATCCTCAGCATGCTATCACTCAGCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000537302.5
ENST00000545699.1
CDS CCA 90 bp TACCACCTCCTGGGTGGATGTGTTGGTATCTCCATCCAGGGACACTaGCATGTCAAAGCACTTGGCTGCCAGACCTTTCTCGCACAGGGG +
Preference number: 5 (lower is better)
Translates to: YHLLGGCVGISIQGH*HVKALGCQTFLAQG
Trigger: CCCCTGTGCGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGAGATACCAACACATCCACCCAGGAGGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CCA 90 bp AAGCTGAGTGATAGCATGCTGAGGATGGCAGATAGGAGTGTCCGCTaGCCAGAGAAGGCCTTCGAGAGCTCCATCTCCTGGGTGAGGCAA +
Preference number: 5 (lower is better)
Translates to: KLSDSMLRMADRSVR*PEKAFESSISWVRQ
Trigger: TTGCCTCACCCAGGAGATGGAGCTCTCGAAGGCCTTCTCTGGCCAGCGGACACTCCTATCTGCCATCCTCAGCATGCTATCACTCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000542415.5
ENST00000545401.5
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTTTCTCGCACAGGGGCTaGGGCACCTTCTGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTFSHRG*GTFCVP
Trigger: GGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGAA...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp CTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGTCCTGGGTGGATGTGTaGGTATCTCCATCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LVPQLGVEVDSLRDRVDGSWVDV*VSPSRD
Trigger: GTCCCTGGATGGAGATACCAACACATCCACCCAGGA...CCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp CAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGGCAAAGGCGCTCAGTTaGAGCCCACAGGCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: QSGWADYDTGGSWSKDPRAKALS*SPQAGF
Trigger: GAACCCTGCCTGTGGGCTCAAACTGAGCGCCTTTGC...CCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp CACTGGGAAGTCCCTGGTGTGACTGTCCAGAAGGGAACCACAGTCCAATCTGAAGCAAAGGCGCTCAGTTaGAGCCCACAGGCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: HWEVPGVTVQKGTTVQSEAKALS*SPQAGF
Trigger: GAACCCTGCCTGTGGGCTCAAACTGAGCGCCTTTGC...TTCAGATTGGACTGTGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTGGCACCTCTCCCCTTTaGCTGCCGCTGTACCACTGG +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTGTSPL*LPLYHW
Trigger: CCAGTGGTACAGCGGCAGCAAAAGGGGAGAGGTGCC...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000537302.5
ENST00000651961.1
CDS CCA 90 bp ATGTGTTGGTATCTCCATCCAGGGACACTGGCATGTCAAAGCACTTaGCTGCCAGACCTTTCTCGCACAGGGGCTTGGGCACCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: MCWYLHPGTLACQST*LPDLSRTGAWAPSV
Trigger: CACAGAAGGTGCCCAAGCCCCTGTGCGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGAGATACCAACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CCA 90 bp GGAGGGAAGCCTTCTCCATCAACCGCTTCCCTCCAAATCGGAGAGTaGGGTGACATGGGCCTTGCAACGTGGCAAATTCCAGTAGTCCTT +
Preference number: 5 (lower is better)
Translates to: GGKPSPSTASLQIGE*GDMGLATWQIPVVL
Trigger: AAGGACTACTGGAATTTGCCACGTTGCAAGGCCCATGTCACCCCACTCTCCGATTTGGAGGGAAGCGGTTGATGGAGAAGGCTTCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351606.10
ENST00000396302.7
ENST00000545401.5
ENST00000545699.1
CDS-3UTR CAA 90 bp GTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTCACACTTTCTCGCACAGGGGCTaGGGCACCTTCTGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: VTSRTIRAYHGKLSHSHTFSHRG*GTFCVP
Trigger: GGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGAA...AGTGTGACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCTTCTCGCACAGGGGCTaGGGCACCTTCTGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTFSHRG*GTFCVP
Trigger: GGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGAA...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp CTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTTCCCCAGTCTCCCAGTaGTATTGTACCACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LLLSAPGWPLFEIPCSAASPVSQ*YCTTSW
Trigger: CCAGGAGGTGGTACAATACAACTGGGAGACTGGGGA...AGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTGCAAAGGCGCTCAGTTaGAGCCCACAGGCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTAKALS*SPQAGF
Trigger: GAACCCTGCCTGTGGGCTCAAACTGAGCGCCTTTGC...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000651961.1
CDS-3UTR CAA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCGGGGTGACATGGGCCTaGCAACGTGGCAAATTCCAG +
Preference number: 5 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRGVTWA*QRGKFQ
Trigger: CTGGAATTTGCCACGTTGCAAGGCCCATGTCACCCC...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS CCA 90 bp CCCCAGTCTCCCAGTTGTATTGTACCACCTCCTGGGTGGATGTGTTaGTATCTCCATCCAGGGACACTGGCATGTCAAAGCACTTGGCTG +
Preference number: 5 (lower is better)
Translates to: PQSPSCIVPPPGWMC*YLHPGTLACQSTWL
Trigger: CAGCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGAGATACCAACACATCCACCCAGGAGGTGGTACAATACAACTGGGAGACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CCA 90 bp ACCGGTCATCCCCAGTCTCCCAGTTGTATTGTACCACCTCCTGGGTaGATGTGTTGGTATCTCCATCCAGGGACACTGGCATGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: TGHPQSPSCIVPPPG*MCWYLHPGTLACQS
Trigger: GCTTTGACATGCCAGTGTCCCTGGATGGAGATACCAACACATCCACCCAGGAGGTGGTACAATACAACTGGGAGACTGGGGATGACCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CCA 90 bp GAGAACCGGTCATCCCCAGTCTCCCAGTTGTATTGTACCACCTCCTaGGTGGATGTGTTGGTATCTCCATCCAGGGACACTGGCATGTCA +
Preference number: 5 (lower is better)
Translates to: ENRSSPVSQLYCTTS*VDVLVSPSRDTGMS
Trigger: TGACATGCCAGTGTCCCTGGATGGAGATACCAACACATCCACCCAGGAGGTGGTACAATACAACTGGGAGACTGGGGATGACCGGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS-3UTR CAA 90 bp CCTAACTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGGGCATGTCAAAGCACTaGGCTGCCAGACCTTTCTCG +
Preference number: 5 (lower is better)
Translates to: PNCFFQLLAGPSLKSLVPGMSKH*AARPFS
Trigger: CGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCC...CGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAGTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp TGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCAGTCTCCCAGTTGTATaGTACCACCTCCTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: CFFQLLAGPSLKSLVPQLSLPVV*YHLLGG
Trigger: TCCACCCAGGAGGTGGTACAATACAACTGGGAGACT...GAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp CACTGGGAAGTCCCTGGTGTGACTGTCCAGAAGGGAACCACAGTCCAATCTGAATCCCCAGTCTCCCAGTaGTATTGTACCACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: HWEVPGVTVQKGTTVQSESPVSQ*YCTTSW
Trigger: CCAGGAGGTGGTACAATACAACTGGGAGACTGGGGA...TTCAGATTGGACTGTGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp CAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGATCCTGGTGTACGTGTaGAAGGTGGTGACAGCCGAC +
Preference number: 5 (lower is better)
Translates to: QSGWADYDTGGSWSKDPRILVYV*KVVTAD
Trigger: GTCGGCTGTCACCACCTTCAACACGTACACCAGGAT...CCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp GGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGCGGTGGGGGCTGCACTaGACAGCCGCCGAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: GMAGSNGISRSRFLRNQMRWGLH*TAAEGN
Trigger: GTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCG...CATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTCTGGCTGGCCCCTCTTaGAAATCCCTTGTTCCGCAG +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTLAGPS*KSLVPQ
Trigger: CTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAG...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp TTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGACTGGCTGGCCCCTCTTaGAAATCCCTTGTTCCGCAG +
Preference number: 5 (lower is better)
Translates to: LKSLVPQLGVEVDSLRDRLAGPS*KSLVPQ
Trigger: CTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAG...TCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp GTCTTCCCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCGGAGCCTATGCCCCCTaGTTCACTGGGAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VFPSVTSRTIRAYHGKLSGAYAP*FTGKSL
Trigger: CAGGGACTTCCCAGTGAACAAGGGGGCATAGGCTCC...GCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGGGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp TGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTGGGGGCTGCCTTTCTCACCTCTCTaGGCTGGTGGTGTAAGTTCA +
Preference number: 5 (lower is better)
Translates to: WADYDTGGSWSKDPRWGLPFSPL*AGGVSS
Trigger: TGAACTTACACCACCAGCCAAGAGAGGTGAGAAAGG...CAGCCCCCACCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS TCA 90 bp GAAGCCTTCTCCATCAACCGCTTCCCTCCAAATCGGAGAGTGGGGTaGCATGGGCCTTGCAACGTGGCAAATTCCAGTAGTCCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: EAFSINRFPPNRRVG*HGPCNVANSSSPFS
Trigger: TGAGAAAGGACTACTGGAATTTGCCACGTTGCAAGGCCCATGTCACCCCACTCTCCGATTTGGAGGGAAGCGGTTGATGGAGAAGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351606.10
ENST00000396302.7
ENST00000545401.5
ENST00000545699.1
CDS CCA 90 bp TTCGAGAGCTCCATCTTGGCCATGGTCAGCGTCTTGCAGCTTGTCTaGAAGAACCGAAGGATGCCATCTGCACTCCAAGTCCCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: FESSILAMVSVLQLV*KNRRMPSALQVPLV
Trigger: AACCAAAGGGACTTGGAGTGCAGATGGCATCCTTCGGTTCTTCCAGACAAGCTGCAAGACGCTGACCATGGCCAAGATGGAGCTCTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000545699.1
CDS CCA 90 bp GGAGAGCCAGGCCATGTAGAAGGCCCAGCCATAATTCCAAACATGTaGTCTCCAGTCTTCTGGACCCAAGTTGACAGTCGCTTGGAAGAC +
Preference number: 5 (lower is better)
Translates to: GEPGHVEGPAIIPNM*SPVFWTQVDSRLED
Trigger: GTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAGACTGGAGACCACATGTTTGGAATTATGGCTGGGCCTTCTACATGGCCTGGCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTCAGCGTCTTGCAGCTaGTCTGGAAGAACCGAAGGA +
Preference number: 5 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRSASCS*SGRTEG
Trigger: TCCTTCGGTTCTTCCAGACAAGCTGCAAGACGCTGA...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000537302.5
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTTTCGAGAGCTCCATCTaGGCCATGGTCAGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTFESSI*AMVSVL
Trigger: CAAGACGCTGACCATGGCCAAGATGGAGCTCTCGAA...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000537302.5
CDS-3UTR CAA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAGGCATGTCAAAGCACTaGGCTGCCAGACCTTTCTCG +
Preference number: 5 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLGMSKH*AARPFS
Trigger: CGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCC...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTATCCTGGGTGGATGTGTaGGTATCTCCATCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLSWVDV*VSPSRD
Trigger: GTCCCTGGATGGAGATACCAACACATCCACCCAGGA...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp AGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTCCTGGGTGGATGTGTaGGTATCTCCATCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: RWSCRGKESSGTQESLRTSWVDV*VSPSRD
Trigger: GTCCCTGGATGGAGATACCAACACATCCACCCAGGA...AGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCAGTCTCCCAGTTGTATaGTACCACCTCCTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRSLPVV*YHLLGG
Trigger: TCCACCCAGGAGGTGGTACAATACAACTGGGAGACT...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTTCCCCAGTCTCCCAGTaGTATTGTACCACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTSPVSQ*YCTTSW
Trigger: CCAGGAGGTGGTACAATACAACTGGGAGACTGGGGA...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTATCCCCAGTCTCCCAGTaGTATTGTACCACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLSPVSQ*YCTTSW
Trigger: CCAGGAGGTGGTACAATACAACTGGGAGACTGGGGA...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp AGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTCCCCAGTCTCCCAGTaGTATTGTACCACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RWSCRGKESSGTQESLRTSPVSQ*YCTTSW
Trigger: CCAGGAGGTGGTACAATACAACTGGGAGACTGGGGA...AGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAATCCTGGTGTACGTGTaGAAGGTGGTGACAGCCGAC +
Preference number: 5 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLILVYV*KVVTAD
Trigger: GTCGGCTGTCACCACCTTCAACACGTACACCAGGAT...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTATCCTGGTGTACGTGTaGAAGGTGGTGACAGCCGAC +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTILVYV*KVVTAD
Trigger: GTCGGCTGTCACCACCTTCAACACGTACACCAGGAT...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp AGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTATCCTGGTGTACGTGTaGAAGGTGGTGACAGCCGAC +
Preference number: 5 (lower is better)
Translates to: RWSCRGKESSGTQESLRTILVYV*KVVTAD
Trigger: GTCGGCTGTCACCACCTTCAACACGTACACCAGGAT...AGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACACGGTGGGGGCTGCACTaGACAGCCGCCGAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: LFVASKNHAQETDVGLSTRWGLH*TAAEGN
Trigger: GTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCG...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp CCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGGCGGTGGGGGCTGCACTaGACAGCCGCCGAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: PGTIFNNTFTGYLLCGCRRWGLH*TAAEGN
Trigger: GTTTCCCTCGGCGGCTGTCAAGTGCAGCCCCCACCG...CCTGCATCCACACAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp AGCCTTGGTGGGCTATTTCTAGAAGTGACCCTGACCCTGTGTGCTGTTGGCGCCTCTAGGTCTAGATTCTaGAGGAATCAGATGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SLGGLFLEVTLTLCAVGASRSRF*RNQMGG
Trigger: GCCACCCATCTGATTCCTCAAGAATCTAGACCTAGA...GGCGCCAACAGCACACAGGGTCAGGGTCACTTCTAGAAATAGCCCACCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp CAAGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACCCAGGAGACCTCTCTaGGCTGGTGGTGTAAGTTCA +
Preference number: 5 (lower is better)
Translates to: QDGAVEEKRAVAPRNPLGPRRPL*AGGVSS
Trigger: TGAACTTACACCACCAGCCAAGAGAGGTCTCCTGGG...TCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457134.6
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTCCCAGGAGACCTCTCTaGGCTGGTGGTGTAAGTTCA +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTPRRPL*AGGVSS
Trigger: TGAACTTACACCACCAGCCAAGAGAGGTCTCCTGGG...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000457134.6
ENST00000537302.5
CDS GCA 90 bp GATGCCATCTGCACTCCAAGTCCCTTTGGTTTAATGTTGCAAGAATaGAAACTGTCTTCCTACCCTCCTCCCTCTCCTCCTACCCCTCCC +
Preference number: 5 (lower is better)
Translates to: DAICTPSPFGLMLQE*KLSSYPPPSPPTPP
Trigger: GGGAGGGGTAGGAGGAGAGGGAGGAGGGTAGGAAGACAGTTTGCATTCTTGCAACATTAAACCAAAGGGACTTGGAGTGCAGATGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CAA 90 bp TTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGATCAGCGTCTTGCAGCTaGTCTGGAAGAACCGAAGGA +
Preference number: 5 (lower is better)
Translates to: LKSLVPQLGVEVDSLRDRSASCS*SGRTEG
Trigger: TCCTTCGGTTCTTCCAGACAAGCTGCAAGACGCTGA...TCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CAA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTATCAGCGTCTTGCAGCTaGTCTGGAAGAACCGAAGGA +
Preference number: 5 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLSASCS*SGRTEG
Trigger: TCCTTCGGTTCTTCCAGACAAGCTGCAAGACGCTGA...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000537302.5
CDS-3UTR CAA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAGCCATGGTCAGCGTCTaGCAGCTTGTCTGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQAMVSV*QLVWKN
Trigger: GTTCTTCCAGACAAGCTGCAAGACGCTGACCATGGC...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000537302.5
CDS-3UTR CAA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCTTCGAGAGCTCCATCTaGGCCATGGTCAGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTFESSI*AMVSVL
Trigger: CAAGACGCTGACCATGGCCAAGATGGAGCTCTCGAA...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000537302.5
CDS-3UTR CAA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCATTCTCGCACAGGGGCTaGGGCACCTTCTGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSFSHRG*GTFCVP
Trigger: GGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGAA...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp GGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGTTCTCGCACAGGGGCTaGGGCACCTTCTGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: GMAGSNGISRSRFLRNQMFSHRG*GTFCVP
Trigger: GGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGAA...CATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp GGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGCTGATTATGATACTGGGCATGTCAAAGCACTaGGCTGCCAGACCTTTCTCG +
Preference number: 5 (lower is better)
Translates to: GVEVDSLRDRVDGLIMILGMSKH*AARPFS
Trigger: CGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCC...CAGTATCATAATCAGCCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAGGCATGTCAAAGCACTaGGCTGCCAGACCTTTCTCG +
Preference number: 5 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQGMSKH*AARPFS
Trigger: CGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCC...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp GTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTCACACTGGCATGTCAAAGCACTaGGCTGCCAGACCTTTCTCG +
Preference number: 5 (lower is better)
Translates to: VTSRTIRAYHGKLSHSHTGMSKH*AARPFS
Trigger: CGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCC...AGTGTGACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp ATAACACTTTTACTGGGTACCTACTGTGTGGATGCAGGACACTGTCCCAGGCAGTCCTGGGTGGATGTGTaGGTATCTCCATCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: ITLLLGTYCVDAGHCPRQSWVDV*VSPSRD
Trigger: GTCCCTGGATGGAGATACCAACACATCCACCCAGGA...CTGCCTGGGACAGTGTCCTGCATCCACACAGTAGGTACCCAGTAAAAGTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp TCCCTCAGAGACAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAATCCTGGGTGGATGTGTaGGTATCTCCATCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SLRDRVDGLIMILVVAGQSWVDV*VSPSRD
Trigger: GTCCCTGGATGGAGATACCAACACATCCACCCAGGA...TTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTGTCTCTGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCTCCTGGGTGGATGTGTaGGTATCTCCATCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTSWVDV*VSPSRD
Trigger: GTCCCTGGATGGAGATACCAACACATCCACCCAGGA...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp CCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTTCCTGGGTGGATGTGTaGGTATCTCCATCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: PSVTSRTIRAYHGKLSHSSWVDV*VSPSRD
Trigger: GTCCCTGGATGGAGATACCAACACATCCACCCAGGA...ACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTAGTCTCCCAGTTGTATaGTACCACCTCCTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTSLPVV*YHLLGG
Trigger: TCCACCCAGGAGGTGGTACAATACAACTGGGAGACT...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAATCCCCAGTCTCCCAGTaGTATTGTACCACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQSPVSQ*YCTTSW
Trigger: CCAGGAGGTGGTACAATACAACTGGGAGACTGGGGA...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTCTTCTGGACCCAAGTaGACAGTCGCTTGGAAGACT +
Preference number: 5 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRSSGPK*TVAWKT
Trigger: AGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAGA...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp CACTGCTCTTCCTCTACAGATGACCTAACTGCTTCTTTCAGCTCCTGGCTGGCCTCTTCTGGACCCAAGTaGACAGTCGCTTGGAAGACT +
Preference number: 5 (lower is better)
Translates to: HCSSSTDDLTASFSSWLASSGPK*TVAWKT
Trigger: AGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAGA...GGCCAGCCAGGAGCTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp GTCTTCCCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCATCCTGGTGTACGTGTaGAAGGTGGTGACAGCCGAC +
Preference number: 5 (lower is better)
Translates to: VFPSVTSRTIRAYHGKLSILVYV*KVVTAD
Trigger: GTCGGCTGTCACCACCTTCAACACGTACACCAGGAT...GCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGGGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAATCCTGGTGTACGTGTaGAAGGTGGTGACAGCCGAC +
Preference number: 5 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQILVYV*KVVTAD
Trigger: GTCGGCTGTCACCACCTTCAACACGTACACCAGGAT...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp CAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAACAGTTCGGGTTTTCCTaGAAGCTCTTACTATGCTTG +
Preference number: 5 (lower is better)
Translates to: QLLAGPSLKSLVPQLGVEQFGFS*KLLLCL
Trigger: CAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACTG...TTCTACTCCGAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp GTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACGGAGCCTATGCCCCCTaGTTCACTGGGAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VEEKRAVAPRNPLGLKDNGAYAP*FTGKSL
Trigger: CAGGGACTTCCCAGTGAACAAGGGGGCATAGGCTCC...GTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAATCGCTCATTCACTCTaGCAGCGGGAAGGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLIAHSL*QREGRE
Trigger: TTCTCTGCCTTCCCGCTGCAAGAGTGAATGAGCGAT...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000651961.1
CDS-3UTR CAA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACATTCTCGCACAGGGGCTaGGGCACCTTCTGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: LFVASKNHAQETDVGLSTFSHRG*GTFCVP
Trigger: GGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGAA...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp GGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGCTGATTATGATACTGAGTCTCCCAGTTGTATaGTACCACCTCCTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: GVEVDSLRDRVDGLIMILSLPVV*YHLLGG
Trigger: TCCACCCAGGAGGTGGTACAATACAACTGGGAGACT...CAGTATCATAATCAGCCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp TGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTCGAGGAAGCTGATGAATaGAAGTCCGATGTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: CFFQLLAGPSLKSLVPQLEEADE*KSDVGD
Trigger: ATCACCTACATCGGACTTCAATTCATCAGCTTCCTC...GAGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp GGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGGCAAAGGCGCTCAGTTaGAGCCCACAGGCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: GMAGSNGISRSRFLRNQMAKALS*SPQAGF
Trigger: GAACCCTGCCTGTGGGCTCAAACTGAGCGCCTTTGC...CATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTTCTTCTGGACCCAAGTaGACAGTCGCTTGGAAGACT +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTSSGPK*TVAWKT
Trigger: AGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAGA...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTACTATGCTTGCACTaGAACTCCAGCACCATCCTG +
Preference number: 5 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRLLCLH*NSSTIL
Trigger: CAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTAA...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp GTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTCACACTGCGTACCATGGAAAGTaGAGCCACAGTCACACTACC +
Preference number: 5 (lower is better)
Translates to: VTSRTIRAYHGKLSHSHTAYHGK*SHSHTT
Trigger: GGTAGTGTGACTGTGGCTCAACTTTCCATGGTACGC...AGTGTGACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp GGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGCTGATTATGATACTGATCGCTCATTCACTCTaGCAGCGGGAAGGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: GVEVDSLRDRVDGLIMILIAHSL*QREGRE
Trigger: TTCTCTGCCTTCCCGCTGCAAGAGTGAATGAGCGAT...CAGTATCATAATCAGCCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351606.10
CDS-3UTR CAA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACAGGCACCTCTCCCCTTTaGCTGCCGCTGTACCACTGG +
Preference number: 5 (lower is better)
Translates to: LFVASKNHAQETDVGLSTGTSPL*LPLYHW
Trigger: CCAGTGGTACAGCGGCAGCAAAAGGGGAGAGGTGCC...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651961.1
CDS-3UTR CAA 90 bp TTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGACCTTTCTCACCTCTCTaGGCTGGTGGTGTAAGTTCA +
Preference number: 5 (lower is better)
Translates to: LKSLVPQLGVEVDSLRDRPFSPL*AGGVSS
Trigger: TGAACTTACACCACCAGCCAAGAGAGGTGAGAAAGG...TCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS GCA 90 bp TGGCCATGGTCAGCGTCTTGCAGCTTGTCTGGAAGAACCGAAGGATaGCATCTGCACTCCAAGTCCCTTTGGTTTAATGTTGCAAGAATG +
Preference number: 5 (lower is better)
Translates to: WPWSASCSLSGRTEG*HLHSKSLWFNVARM
Trigger: CATTCTTGCAACATTAAACCAAAGGGACTTGGAGTGCAGATGGCATCCTTCGGTTCTTCCAGACAAGCTGCAAGACGCTGACCATGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CAA 90 bp GTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACGGCATGTCAAAGCACTaGGCTGCCAGACCTTTCTCG +
Preference number: 5 (lower is better)
Translates to: VEEKRAVAPRNPLGLKDNGMSKH*AARPFS
Trigger: CGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCC...GTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp CACTGGGAAGTCCCTGGTGTGACTGTCCAGAAGGGAACCACAGTCCAATCTGAACATAGGATTTCTCTCTaGGCTGGTGGTGTAAGTTCA +
Preference number: 5 (lower is better)
Translates to: HWEVPGVTVQKGTTVQSEHRISL*AGGVSS
Trigger: TGAACTTACACCACCAGCCAAGAGAGAAATCCTATG...TTCAGATTGGACTGTGGTTCCCTTCTGGACAGTCACACCAGGGACTTCCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCTCTTCTGGACCCAAGTaGACAGTCGCTTGGAAGACT +
Preference number: 5 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTSSGPK*TVAWKT
Trigger: AGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAGA...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTTTACTATGCTTGCACTaGAACTCCAGCACCATCCTG +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTLLCLH*NSSTIL
Trigger: CAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTAA...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp TTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGAAAGCTCTTACTATGCTaGCACTTGAACTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: LKSLVPQLGVEVDSLRDRKLLLC*HLNSST
Trigger: GGTGCTGGAGTTCAAGTGCAAGCATAGTAAGAGCTT...TCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp AGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTAAGCTCTTACTATGCTaGCACTTGAACTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: RWSCRGKESSGTQESLRTKLLLC*HLNSST
Trigger: GGTGCTGGAGTTCAAGTGCAAGCATAGTAAGAGCTT...AGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTAAGCTCTTACTATGCTaGCACTTGAACTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTKLLLC*HLNSST
Trigger: GGTGCTGGAGTTCAAGTGCAAGCATAGTAAGAGCTT...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp CAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGCAGTTCGGGTTTTCCTaGAAGCTCTTACTATGCTTG +
Preference number: 5 (lower is better)
Translates to: QSGWADYDTGGSWSKDPRQFGFS*KLLLCL
Trigger: CAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACTG...CCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp GTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCCAGTTCGGGTTTTCCTaGAAGCTCTTACTATGCTTG +
Preference number: 5 (lower is better)
Translates to: VDNQQTCKVGLKPTPQTRQFGFS*KLLLCL
Trigger: CAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACTG...GCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp AGCTTCATCCATGTCCCTACAAAGGGCATAAACTCATCCTTCTTTATGGCTGCACTGGCTGGCCCCTCTTaGAAATCCCTTGTTCCGCAG +
Preference number: 5 (lower is better)
Translates to: SFIHVPTKGINSSFFMAALAGPS*KSLVPQ
Trigger: CTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAG...TGCAGCCATAAAGAAGGATGAGTTTATGCCCTTTGTAGGGACATGGATGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp CTGCTTCTTTCAGCTCCTGGCTGGCCCCTCTTTGAAATCCCTTGTTCCGCAGCTTGGCTTAAGCACATGTaGATAATCAGCAGACGTGTA +
Preference number: 5 (lower is better)
Translates to: LLLSAPGWPLFEIPCSAAWLKHM*IISRRV
Trigger: TACACGTCTGCTGATTATCAACATGTGCTTAAGCCA...AGCTGCGGAACAAGGGATTTCAAAGAGGGGCCAGCCAGGAGCTGAAAGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp CACTGCTCTTCCTCTACAGATGACCTAACTGCTTCTTTCAGCTCCTGGCTGGCCATAACCATAGGATTTTaGCCACAAAGCCCCAAGGGA +
Preference number: 5 (lower is better)
Translates to: HCSSSTDDLTASFSSWLAITIGF*PQSPKG
Trigger: TCCCTTGGGGCTTTGTGGCAAAAATCCTATGGTTAT...GGCCAGCCAGGAGCTGAAAGAAGCAGTTAGGTCATCTGTAGAGGAAGAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS GCA 90 bp GGTCAGCGTCTTGCAGCTTGTCTGGAAGAACCGAAGGATGCCATCTaGACTCCAAGTCCCTTTGGTTTAATGTTGCAAGAATGCAAACTG +
Preference number: 5 (lower is better)
Translates to: GQRLAACLEEPKDAI*TPSPFGLMLQECKL
Trigger: CAGTTTGCATTCTTGCAACATTAAACCAAAGGGACTTGGAGTGCAGATGGCATCCTTCGGTTCTTCCAGACAAGCTGCAAGACGCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CAA 90 bp TCCTTTGGGTATCTACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGGTCAGCGTCTTGCAGCTaGTCTGGAAGAACCGAAGGA +
Preference number: 5 (lower is better)
Translates to: SFGYLPSNGMAGSNGISRSASCS*SGRTEG
Trigger: TCCTTCGGTTCTTCCAGACAAGCTGCAAGACGCTGA...CCTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTAGATACCCAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337630.10
CDS-3UTR CAA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTACATAGGATTTCTCTCTaGGCTGGTGGTGTAAGTTCA +
Preference number: 5 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLHRISL*AGGVSS
Trigger: TGAACTTACACCACCAGCCAAGAGAGAAATCCTATG...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337630.10
ENST00000432710.6
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTGAGGAAGCTGATGAATaGAAGTCCGATGTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTEEADE*KSDVGD
Trigger: ATCACCTACATCGGACTTCAATTCATCAGCTTCCTC...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000651961.1
CDS-3UTR CAA 90 bp ATGTTCCCCACCCTGTGTCCAAGTGTTTTTATTGTTCAATTCCCACCTGTGAGTATCCTGGTGTACGTGTaGAAGGTGGTGACAGCCGAC +
Preference number: 5 (lower is better)
Translates to: MFPTLCPSVFIVQFPPVSILVYV*KVVTAD
Trigger: GTCGGCTGTCACCACCTTCAACACGTACACCAGGAT...ACTCACAGGTGGGAATTGAACAATAAAAACACTTGGACACAGGGTGGGGAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAATTACTATGCTTGCACTaGAACTCCAGCACCATCCTG +
Preference number: 5 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQLLCLH*NSSTIL
Trigger: CAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTAA...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp GGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGCTGATTATGATACTGTTACTATGCTTGCACTaGAACTCCAGCACCATCCTG +
Preference number: 5 (lower is better)
Translates to: GVEVDSLRDRVDGLIMILLLCLH*NSSTIL
Trigger: CAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTAA...CAGTATCATAATCAGCCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp CATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCTTACTATGCTTGCACTaGAACTCCAGCACCATCCTG +
Preference number: 5 (lower is better)
Translates to: HVDNQQTCKVGLKPTPQTLLCLH*NSSTIL
Trigger: CAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTAA...GGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp CCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTTTACTATGCTTGCACTaGAACTCCAGCACCATCCTG +
Preference number: 5 (lower is better)
Translates to: PSVTSRTIRAYHGKLSHSLLCLH*NSSTIL
Trigger: CAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTAA...ACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAAAGCTCTTACTATGCTaGCACTTGAACTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQKLLLC*HLNSST
Trigger: GGTGCTGGAGTTCAAGTGCAAGCATAGTAAGAGCTT...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp AGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTCAGTTCGGGTTTTCCTaGAAGCTCTTACTATGCTTG +
Preference number: 5 (lower is better)
Translates to: RWSCRGKESSGTQESLRTQFGFS*KLLLCL
Trigger: CAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACTG...AGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTCAGTTCGGGTTTTCCTaGAAGCTCTTACTATGCTTG +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTQFGFS*KLLLCL
Trigger: CAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACTG...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp CAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGTGGCTTAAGCACATGTaGATAATCAGCAGACGTGTA +
Preference number: 5 (lower is better)
Translates to: QSGWADYDTGGSWSKDPRWLKHM*IISRRV
Trigger: TACACGTCTGCTGATTATCAACATGTGCTTAAGCCA...CCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp AGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTCACACTACCGTTAATTaGCTCACCTCCATTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RWSCRGKESSGTQESLRTHTTVN*LTSISP
Trigger: TGGAGAAATGGAGGTGAGCAAATTAACGGTAGTGTG...AGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAATCTAGGTCTAGATTCTaGAGGAATCAGATGGGTGGC +
Preference number: 5 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQSRSRF*RNQMGG
Trigger: GCCACCCATCTGATTCCTCAAGAATCTAGACCTAGA...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp CAGAGTGGATGGGCTGATTATGATACTGGTGGTAGCTGGTCAAAGGACCCACGGAACATTTTGAGTCAGTaGAGAGGGATCGCTCATTCA +
Preference number: 5 (lower is better)
Translates to: QSGWADYDTGGSWSKDPRNILSQ*RGIAHS
Trigger: TGAATGAGCGATCCCTCTCAACTGACTCAAAATGTT...CCGTGGGTCCTTTGACCAGCTACCACCAGTATCATAATCAGCCCATCCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351606.10
CDS-3UTR CAA 90 bp TTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGAATAACCATAGGATTTTaGCCACAAAGCCCCAAGGGA +
Preference number: 5 (lower is better)
Translates to: LKSLVPQLGVEVDSLRDRITIGF*PQSPKG
Trigger: TCCCTTGGGGCTTTGTGGCAAAAATCCTATGGTTAT...TCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS CCA 90 bp TTGTCTGGAAGAACCGAAGGATGCCATCTGCACTCCAAGTCCCTTTaGTTTAATGTTGCAAGAATGCAAACTGTCTTCCTACCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LSGRTEGCHLHSKSL*FNVARMQTVFLPSS
Trigger: GGAGGAGGGTAGGAAGACAGTTTGCATTCTTGCAACATTAAACCAAAGGGACTTGGAGTGCAGATGGCATCCTTCGGTTCTTCCAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CAA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACATTCGAGAGCTCCATCTaGGCCATGGTCAGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: LFVASKNHAQETDVGLSTFESSI*AMVSVL
Trigger: CAAGACGCTGACCATGGCCAAGATGGAGCTCTCGAA...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
CDS-3UTR CAA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACAGGCATGTCAAAGCACTaGGCTGCCAGACCTTTCTCG +
Preference number: 5 (lower is better)
Translates to: LFVASKNHAQETDVGLSTGMSKH*AARPFS
Trigger: CGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCC...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACATCCCCAGTCTCCCAGTaGTATTGTACCACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LFVASKNHAQETDVGLSTSPVSQ*YCTTSW
Trigger: CCAGGAGGTGGTACAATACAACTGGGAGACTGGGGA...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp GGAGTAGAAGTCGACTCCCTCAGAGACAGAGTGGATGGGCTGATTATGATACTGGAGGAAGCTGATGAATaGAAGTCCGATGTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: GVEVDSLRDRVDGLIMILEEADE*KSDVGD
Trigger: ATCACCTACATCGGACTTCAATTCATCAGCTTCCTC...CAGTATCATAATCAGCCCATCCACTCTGTCTCTGAGGGAGTCGACTTCTACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351606.10
ENST00000396302.7
CDS-3UTR CAA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAACAGTTCGGGTTTTCCTaGAAGCTCTTACTATGCTTG +
Preference number: 5 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQQFGFS*KLLLCL
Trigger: CAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACTG...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS-3UTR CAA 90 bp GTCTTCCCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCAGTTCGGGTTTTCCTaGAAGCTCTTACTATGCTTG +
Preference number: 5 (lower is better)
Translates to: VFPSVTSRTIRAYHGKLSQFGFS*KLLLCL
Trigger: CAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACTG...GCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAACACACTACCGTTAATTaGCTCACCTCCATTTCTCCA +
Preference number: 5 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQHTTVN*LTSISP
Trigger: TGGAGAAATGGAGGTGAGCAAATTAACGGTAGTGTG...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp GGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGGCGTACCATGGAAAGTaGAGCCACAGTCACACTACC +
Preference number: 5 (lower is better)
Translates to: GMAGSNGISRSRFLRNQMAYHGK*SHSHTT
Trigger: GGTAGTGTGACTGTGGCTCAACTTTCCATGGTACGC...CATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCAATCGCTCATTCACTCTaGCAGCGGGAAGGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSIAHSL*QREGRE
Trigger: TTCTCTGCCTTCCCGCTGCAAGAGTGAATGAGCGAT...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651961.1
CDS-3UTR CAA 90 bp GATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAAACATTTTGAGTCAGTaGAGAGGGATCGCTCATTCA +
Preference number: 5 (lower is better)
Translates to: DNQQTCKVGLKPTPQTRLNILSQ*RGIAHS
Trigger: TGAATGAGCGATCCCTCTCAACTGACTCAAAATGTT...TAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000651961.1
CDS-3UTR CAA 90 bp AGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTAACATTTTGAGTCAGTaGAGAGGGATCGCTCATTCA +
Preference number: 5 (lower is better)
Translates to: RWSCRGKESSGTQESLRTNILSQ*RGIAHS
Trigger: TGAATGAGCGATCCCTCTCAACTGACTCAAAATGTT...AGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651961.1
CDS CCA 90 bp GCCGCTGTACCACTGGACCGAAGGGCTCTAAATTGTTTCCAGGACTaGGGATGGAGCAGTGCTAAGTGGCACAATAATAAATATAAATGT +
Preference number: 5 (lower is better)
Translates to: AAVPLDRRALNCFQD*GWSSAKWHNNKYKC
Trigger: ACATTTATATTTATTATTGTGCCACTTAGCACTGCTCCATCCCCAGTCCTGGAAACAATTTAGAGCCCTTCGGTCCAGTGGTACAGCGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542415.5
ENST00000545699.1
CDS-3UTR CAA 90 bp ATCTACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTAGTCTCCCAGTTGTATaGTACCACCTCCTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: IYPVMGWLGQMVFLGLDSSLPVV*YHLLGG
Trigger: TCCACCCAGGAGGTGGTACAATACAACTGGGAGACT...AGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp CCATCTGTGACTTCCAGAACAATTCGCGCGTACCATGGAAAGTTGAGCCACAGTTATCCTTGCGATAGTTaGCTCAGAATGATGGTTTCC +
Preference number: 5 (lower is better)
Translates to: PSVTSRTIRAYHGKLSHSYPCDS*LRMMVS
Trigger: GGAAACCATCATTCTGAGCAAACTATCGCAAGGATA...ACTGTGGCTCAACTTTCCATGGTACGCGCGAATTGTTCTGGAAGTCACAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTGAGAATATGCAGTGTTaGGTTTTCTATCCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTENMQC*VFYPCD
Trigger: ATCGCAAGGATAGAAAACCAAACACTGCATATTCTC...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp AGATGGAGCTGTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTGAGAATATGCAGTGTTaGGTTTTCTATCCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: RWSCRGKESSGTQESLRTENMQC*VFYPCD
Trigger: ATCGCAAGGATAGAAAACCAAACACTGCATATTCTC...AGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTACAGCTCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp TTGAAATCCCTTGTTCCGCAGCTCGGAGTAGAAGTCGACTCCCTCAGAGACAGACCCTTTGGTTTAATGTaGCAAGAATGCAAACTGTCT +
Preference number: 5 (lower is better)
Translates to: LKSLVPQLGVEVDSLRDRPFGLM*QECKLS
Trigger: AGACAGTTTGCATTCTTGCAACATTAAACCAAAGGG...TCTGTCTCTGAGGGAGTCGACTTCTACTCCGAGCTGCGGAACAAGGGATTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS-3UTR CAA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACATCTTCTGGACCCAAGTaGACAGTCGCTTGGAAGACT +
Preference number: 5 (lower is better)
Translates to: LFVASKNHAQETDVGLSTSSGPK*TVAWKT
Trigger: AGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAGA...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCAAAGCTCTTACTATGCTaGCACTTGAACTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSKLLLC*HLNSST
Trigger: GGTGCTGGAGTTCAAGTGCAAGCATAGTAAGAGCTT...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp AATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAACCCGCTTAACTGCACAACGTGCAGATTaGTTACATATGTATACATGT +
Preference number: 5 (lower is better)
Translates to: NQQTCKVGLKPTPQTRLTAQRAD*LHMYTC
Trigger: ACATGTATACATATGTAACAAATCTGCACGTTGTGC...AGTTAAGCGGGTTTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS TCA 90 bp AAGTTTCAGTTTATCTTCTGTTCTGTCTCAATCAGTTGGGTAGAATaGGTGTTTAGCGTGAGGATGAATCAGGTCCCCTCTTGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: KFQFIFCSVSISWVE*VFSVRMNQVPSCQQ
Trigger: CTGCTGGCAAGAGGGGACCTGATTCATCCTCACGCTAAACACTCATTCTACCCAACTGATTGAGACAGAACAGAAGATAAACTGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000542415.5
ENST00000545401.5
ENST00000651961.1
CDS-3UTR CAA 90 bp GGGATGGCTGGGTCAAATGGTATTTCTAGGTCTAGATTCTTGAGGAATCAGATGCATAGGATTTCTCTCTaGGCTGGTGGTGTAAGTTCA +
Preference number: 5 (lower is better)
Translates to: GMAGSNGISRSRFLRNQMHRISL*AGGVSS
Trigger: TGAACTTACACCACCAGCCAAGAGAGAAATCCTATG...CATCTGATTCCTCAAGAATCTAGACCTAGAAATACCATTTGACCCAGCCATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp AAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACCCTTATTCAGAGGAAGCTGATGAATaGAAGTCCGATGTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: KRAVAPRNPLGLKDNPYSEEADE*KSDVGD
Trigger: ATCACCTACATCGGACTTCAATTCATCAGCTTCCTC...TGAATAAGGGTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000651961.1
CDS-3UTR CAA 90 bp CTCCTAAGGGCTCCTGGGACAATATTTAATAACACTTTTACTGGGTACCTACTGTTACTATGCTTGCACTaGAACTCCAGCACCATCCTG +
Preference number: 5 (lower is better)
Translates to: LLRAPGTIFNNTFTGYLLLLCLH*NSSTIL
Trigger: CAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTAA...CAGTAGGTACCCAGTAAAAGTGTTATTAAATATTGTCCCAGGAGCCCTTAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp TCCTTTGGGTATCTACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGGTGGCTTAAGCACATGTaGATAATCAGCAGACGTGTA +
Preference number: 5 (lower is better)
Translates to: SFGYLPSNGMAGSNGISRWLKHM*IISRRV
Trigger: TACACGTCTGCTGATTATCAACATGTGCTTAAGCCA...CCTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTAGATACCCAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp GTAGAGGAAAAGAGAGCAGTGGCACCCAGGAATCCCTTAGGACTTAAAGATAACTGGCTTAAGCACATGTaGATAATCAGCAGACGTGTA +
Preference number: 5 (lower is better)
Translates to: VEEKRAVAPRNPLGLKDNWLKHM*IISRRV
Trigger: TACACGTCTGCTGATTATCAACATGTGCTTAAGCCA...GTTATCTTTAAGTCCTAAGGGATTCCTGGGTGCCACTGCTCTCTTTTCCTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000651961.1
CDS-3UTR CAA 90 bp GCACATGTTGATAATCAGCAGACGTGTAAGGTAGGGCTCAAGCCTACTCCCCAAGCACAACGTGCAGATTaGTTACATATGTATACATGT +
Preference number: 5 (lower is better)
Translates to: AHVDNQQTCKVGLKPTPQAQRAD*LHMYTC
Trigger: ACATGTATACATATGTAACAAATCTGCACGTTGTGC...TTGGGGAGTAGGCTTGAGCCCTACCTTACACGTCTGCTGATTATCAACATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS-3UTR CAA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACAGAGGAAGCTGATGAATaGAAGTCCGATGTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: LFVASKNHAQETDVGLSTEEADE*KSDVGD
Trigger: ATCACCTACATCGGACTTCAATTCATCAGCTTCCTC...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000651961.1
CDS-3UTR CAA 90 bp TTATTCGTAGCCTCTAAAAACCATGCTCAAGAGACGGATGTTGGCTTAAGCACATATCCTTGCGATAGTTaGCTCAGAATGATGGTTTCC +
Preference number: 5 (lower is better)
Translates to: LFVASKNHAQETDVGLSTYPCDS*LRMMVS
Trigger: GGAAACCATCATTCTGAGCAAACTATCGCAAGGATA...TGTGCTTAAGCCAACATCCGTCTCTTGAGCATGGTTTTTAGAGGCTACGAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337630.10
ENST00000651961.1
CDS CCA 72 bp GATAGCATGCTGAGGATGGCAGATAGGAGTGTCCGCTaGCCAGAGAAGGCCTTCGAGAGCTCCATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: DSMLRMADRSVR*PEKAFESSILA
Trigger: GGCCAAGATGGAGCTCTCGAAGGCCTTCTCTGGCCAGCGGACACTCCTATCTGCCATCCTCAGCATGCTATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000457134.6
ENST00000537302.5
ENST00000545699.1
CDS CCA 72 bp GATAGCATGCTGAGGATGGCAGATAGGAGTGTCCGCTaGCCAGAGAAGGCCTTCGAGAGCTCCATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: DSMLRMADRSVR*PEKAFESSISW
Trigger: CCAGGAGATGGAGCTCTCGAAGGCCTTCTCTGGCCAGCGGACACTCCTATCTGCCATCCTCAGCATGCTATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000542415.5
ENST00000545401.5
ENST00000651961.1
CDS CAA 72 bp GTATCTCCATCCAGGGACACTGGCATGTCAAAGCACTaGGCTGCCAGACCTTTCTCGCACAGGGGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: VSPSRDTGMSKH*AARPFSHRGLG
Trigger: GCCCAAGCCCCTGTGCGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGAGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CAA 90 bp CTCCGGAAGCTCCGGAAGGAGAACCGGTCATCCCCAGTCTCCCAGTaGTATTGTACCACCTCCTGGGTGGATGTGTTGGTATCTCCATCC +
Preference number: 6 (lower is better)
Translates to: LRKLRKENRSSPVSQ*YCTTSWVDVLVSPS
Trigger: GGATGGAGATACCAACACATCCACCCAGGAGGTGGTACAATACAACTGGGAGACTGGGGATGACCGGTTCTCCTTCCGGAGCTTCCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CCA 72 bp TATCTCCATCCAGGGACACTGGCATGTCAAAGCACTTaGCTGCCAGACCTTTCTCGCACAGGGGCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: YLHPGTLACQST*LPDLSRTGAWA
Trigger: TGCCCAAGCCCCTGTGCGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CAA 90 bp AGGCCTTCGAGAGCTCCATCTTGGCCATGGTCAGCGTCTTGCAGCTaGTCTGGAAGAACCGAAGGATGCCATCTGCACTCCAAGTCCCTT +
Preference number: 6 (lower is better)
Translates to: RPSRAPSWPWSASCS*SGRTEGCHLHSKSL
Trigger: AAGGGACTTGGAGTGCAGATGGCATCCTTCGGTTCTTCCAGACAAGCTGCAAGACGCTGACCATGGCCAAGATGGAGCTCTCGAAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000545699.1
CDS CAA 90 bp GATGTGTTGGTATCTCCATCCAGGGACACTGGCATGTCAAAGCACTaGGCTGCCAGACCTTTCTCGCACAGGGGCTTGGGCACCTTCTGT +
Preference number: 6 (lower is better)
Translates to: DVLVSPSRDTGMSKH*AARPFSHRGLGTFC
Trigger: ACAGAAGGTGCCCAAGCCCCTGTGCGAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGAGATACCAACACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CAA 90 bp GAAGCTCCGGAAGGAGAACCGGTCATCCCCAGTCTCCCAGTTGTATaGTACCACCTCCTGGGTGGATGTGTTGGTATCTCCATCCAGGGA +
Preference number: 6 (lower is better)
Translates to: EAPEGEPVIPSLPVV*YHLLGGCVGISIQG
Trigger: TCCCTGGATGGAGATACCAACACATCCACCCAGGAGGTGGTACAATACAACTGGGAGACTGGGGATGACCGGTTCTCCTTCCGGAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS GCA 72 bp CTGGTTCTTCCACAGTTTCCTCACAGGATAGCCACATaGCACTCCGGAAGCTCCGGAAGGAGAACCGGTCAT +
Preference number: 6 (lower is better)
Translates to: LVLPQFPHRIAT*HSGSSGRRTGH
Trigger: ATGACCGGTTCTCCTTCCGGAGCTTCCGGAGTGGCATGTGGCTATCCTGTGAGGAAACTGTGGAAGAACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CCA 72 bp CCCCAGTCTCCCAGTTGTATTGTACCACCTCCTGGGTaGATGTGTTGGTATCTCCATCCAGGGACACTGGCA +
Preference number: 6 (lower is better)
Translates to: PQSPSCIVPPPG*MCWYLHPGTLA
Trigger: TGCCAGTGTCCCTGGATGGAGATACCAACACATCCACCCAGGAGGTGGTACAATACAACTGGGAGACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CCA 72 bp CCTTCTCCATCAACCGCTTCCCTCCAAATCGGAGAGTaGGGTGACATGGGCCTTGCAACGTGGCAAATTCCA +
Preference number: 6 (lower is better)
Translates to: PSPSTASLQIGE*GDMGLATWQIP
Trigger: TGGAATTTGCCACGTTGCAAGGCCCATGTCACCCCACTCTCCGATTTGGAGGGAAGCGGTTGATGGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351606.10
ENST00000396302.7
ENST00000545401.5
ENST00000545699.1
CDS CAA 72 bp GCCTTCGAGAGCTCCATCTTGGCCATGGTCAGCGTCTaGCAGCTTGTCTGGAAGAACCGAAGGATGCCATCT +
Preference number: 6 (lower is better)
Translates to: AFESSILAMVSV*QLVWKNRRMPS
Trigger: AGATGGCATCCTTCGGTTCTTCCAGACAAGCTGCAAGACGCTGACCATGGCCAAGATGGAGCTCTCGAAGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000537302.5
ENST00000545699.1
CDS CAA 72 bp CTCCGGAAGGAGAACCGGTCATCCCCAGTCTCCCAGTaGTATTGTACCACCTCCTGGGTGGATGTGTTGGTA +
Preference number: 6 (lower is better)
Translates to: LRKENRSSPVSQ*YCTTSWVDVLV
Trigger: TACCAACACATCCACCCAGGAGGTGGTACAATACAACTGGGAGACTGGGGATGACCGGTTCTCCTTCCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CAA 90 bp AGGAGACCTGACAGGACAGAGGAAACAGCAGCAAAGGCGCTCAGTTaGAGCCCACAGGCAGGGTTCCCAGTGAGTAGCAAGTCTGTTAGT +
Preference number: 6 (lower is better)
Translates to: RRPDRTEETAAKALS*SPQAGFPVSSKSVS
Trigger: ACTAACAGACTTGCTACTCACTGGGAACCCTGCCTGTGGGCTCAAACTGAGCGCCTTTGCTGCTGTTTCCTCTGTCCTGTCAGGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000545401.5
ENST00000651961.1
CDS TCA 72 bp TCCATCAACCGCTTCCCTCCAAATCGGAGAGTGGGGTaGCATGGGCCTTGCAACGTGGCAAATTCCAGTAGT +
Preference number: 6 (lower is better)
Translates to: SINRFPPNRRVG*HGPCNVANSSS
Trigger: ACTACTGGAATTTGCCACGTTGCAAGGCCCATGTCACCCCACTCTCCGATTTGGAGGGAAGCGGTTGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351606.10
ENST00000396302.7
ENST00000545401.5
ENST00000545699.1
CDS CCA 72 bp TCCATCTTGGCCATGGTCAGCGTCTTGCAGCTTGTCTaGAAGAACCGAAGGATGCCATCTGCACTCCAAGTC +
Preference number: 6 (lower is better)
Translates to: SILAMVSVLQLV*KNRRMPSALQV
Trigger: GACTTGGAGTGCAGATGGCATCCTTCGGTTCTTCCAGACAAGCTGCAAGACGCTGACCATGGCCAAGATGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337630.10
ENST00000396302.7
ENST00000545699.1
CDS CCA 72 bp CTGGGTGGATGTGTTGGTATCTCCATCCAGGGACACTaGCATGTCAAAGCACTTGGCTGCCAGACCTTTCTC +
Preference number: 6 (lower is better)
Translates to: LGGCVGISIQGH*HVKALGCQTFL
Trigger: GAGAAAGGTCTGGCAGCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGAGATACCAACACATCCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CAA 72 bp GAAGGAGAACCGGTCATCCCCAGTCTCCCAGTTGTATaGTACCACCTCCTGGGTGGATGTGTTGGTATCTCC +
Preference number: 6 (lower is better)
Translates to: EGEPVIPSLPVV*YHLLGGCVGIS
Trigger: GGAGATACCAACACATCCACCCAGGAGGTGGTACAATACAACTGGGAGACTGGGGATGACCGGTTCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CAA 90 bp TCCCCAGTCTCCCAGTTGTATTGTACCACCTCCTGGGTGGATGTGTaGGTATCTCCATCCAGGGACACTGGCATGTCAAAGCACTTGGCT +
Preference number: 6 (lower is better)
Translates to: SPVSQLYCTTSWVDV*VSPSRDTGMSKHLA
Trigger: AGCCAAGTGCTTTGACATGCCAGTGTCCCTGGATGGAGATACCAACACATCCACCCAGGAGGTGGTACAATACAACTGGGAGACTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CAA 90 bp CCCTCCTCCCTCTCCTCCTACCCCTCCCCTTCTATCTCATATTCTTaGGAGTGCCTCATGATTAAATGCTGCCTTACAGGGAACACGGGC +
Preference number: 6 (lower is better)
Translates to: PSSLSSYPSPSISYS*ECLMIKCCLTGNTG
Trigger: GCCCGTGTTCCCTGTAAGGCAGCATTTAATCATGAGGCACTCCAAAGAATATGAGATAGAAGGGGAGGGGTAGGAGGAGAGGGAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS CCA 72 bp CCCAGTTGTATTGTACCACCTCCTGGGTGGATGTGTTaGTATCTCCATCCAGGGACACTGGCATGTCAAAGC +
Preference number: 6 (lower is better)
Translates to: PSCIVPPPGWMC*YLHPGTLACQS
Trigger: GCTTTGACATGCCAGTGTCCCTGGATGGAGATACCAACACATCCACCCAGGAGGTGGTACAATACAACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CCA 72 bp TCATCCCCAGTCTCCCAGTTGTATTGTACCACCTCCTaGGTGGATGTGTTGGTATCTCCATCCAGGGACACT +
Preference number: 6 (lower is better)
Translates to: SSPVSQLYCTTS*VDVLVSPSRDT
Trigger: AGTGTCCCTGGATGGAGATACCAACACATCCACCCAGGAGGTGGTACAATACAACTGGGAGACTGGGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CCA 72 bp GGCCATGTAGAAGGCCCAGCCATAATTCCAAACATGTaGTCTCCAGTCTTCTGGACCCAAGTTGACAGTCGC +
Preference number: 6 (lower is better)
Translates to: GHVEGPAIIPNM*SPVFWTQVDSR
Trigger: GCGACTGTCAACTTGGGTCCAGAAGACTGGAGACCACATGTTTGGAATTATGGCTGGGCCTTCTACATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS CCA 72 bp CAAATCGGAGAGTGGGGTGACATGGGCCTTGCAACGTaGCAAATTCCAGTAGTCCTTTCTCACCTCTCTTGG +
Preference number: 6 (lower is better)
Translates to: QIGEWGDMGLAT*QIPVVLSHLSW
Trigger: CCAAGAGAGGTGAGAAAGGACTACTGGAATTTGCCACGTTGCAAGGCCCATGTCACCCCACTCTCCGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351606.10
ENST00000396302.7
ENST00000545401.5
ENST00000545699.1
CDS CAA 90 bp CTTCGAGAGCTCCATCTCCTGGGTGAGGCAAACATTTTGAGTCAGTaGAGAGGGATCGCTCATTCACTCTTGCAGCGGGAAGGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: LRELHLLGEANILSQ*RGIAHSLLQREGRE
Trigger: TTCTCTGCCTTCCCGCTGCAAGAGTGAATGAGCGATCCCTCTCAACTGACTCAAAATGTTTGCCTCACCCAGGAGATGGAGCTCTCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000542415.5
ENST00000545401.5
ENST00000651961.1
CDS CAA 90 bp GGGCCTTGCAACGTGGCAAATTCCAGTAGTCCTTTCTCACCTCTCTaGGCTGGTGGTGTAAGTTCAATGAAACTTCGGCACCTCTCCCCT +
Preference number: 6 (lower is better)
Translates to: GPCNVANSSSPFSPL*AGGVSSMKLRHLSP
Trigger: AGGGGAGAGGTGCCGAAGTTTCATTGAACTTACACCACCAGCCAAGAGAGGTGAGAAAGGACTACTGGAATTTGCCACGTTGCAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351606.10
ENST00000396302.7
ENST00000545401.5
ENST00000545699.1
CDS CAA 72 bp TCCCAGTTGTATTGTACCACCTCCTGGGTGGATGTGTaGGTATCTCCATCCAGGGACACTGGCATGTCAAAG +
Preference number: 6 (lower is better)
Translates to: SQLYCTTSWVDV*VSPSRDTGMSK
Trigger: CTTTGACATGCCAGTGTCCCTGGATGGAGATACCAACACATCCACCCAGGAGGTGGTACAATACAACTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000542415.5
ENST00000545401.5
ENST00000545699.1
ENST00000651961.1
CDS CAA 72 bp CTCCATCTCCTGGGTGAGGCAAACATTTTGAGTCAGTaGAGAGGGATCGCTCATTCACTCTTGCAGCGGGAA +
Preference number: 6 (lower is better)
Translates to: LHLLGEANILSQ*RGIAHSLLQRE
Trigger: TTCCCGCTGCAAGAGTGAATGAGCGATCCCTCTCAACTGACTCAAAATGTTTGCCTCACCCAGGAGATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000542415.5
ENST00000545401.5
ENST00000651961.1
CDS CAA 90 bp GGTAGGCAGTTCGGGTTTTCCTTGAAGCTCTTACTATGCTTGCACTaGAACTCCAGCACCATCCTGGTGTACGTGTTGAAGGTGGTGACA +
Preference number: 6 (lower is better)
Translates to: GRQFGFSLKLLLCLH*NSSTILVYVLKVVT
Trigger: TGTCACCACCTTCAACACGTACACCAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACTGCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS GCA 72 bp GGTAGGCAGTTCGGGTTTTCCTTGAAGCTCTTACTATaGTTGCACTTGAACTCCAGCACCATCCTGGTGTAC +
Preference number: 6 (lower is better)
Translates to: GRQFGFSLKLLL*LHLNSSTILVY
Trigger: GTACACCAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTAAGAGCTTCAAGGAAAACCCGAACTGCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS GCA 72 bp TCAGCGTCTTGCAGCTTGTCTGGAAGAACCGAAGGATaGCATCTGCACTCCAAGTCCCTTTGGTTTAATGTT +
Preference number: 6 (lower is better)
Translates to: SASCSLSGRTEG*HLHSKSLWFNV
Trigger: AACATTAAACCAAAGGGACTTGGAGTGCAGATGGCATCCTTCGGTTCTTCCAGACAAGCTGCAAGACGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS CCA 72 bp CCACTGGACCGAAGGGCTCTAAATTGTTTCCAGGACTaGGGATGGAGCAGTGCTAAGTGGCACAATAATAAA +
Preference number: 6 (lower is better)
Translates to: PLDRRALNCFQD*GWSSAKWHNNK
Trigger: TTTATTATTGTGCCACTTAGCACTGCTCCATCCCCAGTCCTGGAAACAATTTAGAGCCCTTCGGTCCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542415.5
ENST00000545699.1
CDS GCA 72 bp TCCTACCCCTCCCCTTCTATCTCATATTCTTTGGAGTaGCTCATGATTAAATGCTGCCTTACAGGGAACACG +
Preference number: 6 (lower is better)
Translates to: SYPSPSISYSLE*LMIKCCLTGNT
Trigger: CGTGTTCCCTGTAAGGCAGCATTTAATCATGAGGCACTCCAAAGAATATGAGATAGAAGGGGAGGGGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS GCA 72 bp CTTGCAGCTTGTCTGGAAGAACCGAAGGATGCCATCTaGACTCCAAGTCCCTTTGGTTTAATGTTGCAAGAA +
Preference number: 6 (lower is better)
Translates to: LAACLEEPKDAI*TPSPFGLMLQE
Trigger: TTCTTGCAACATTAAACCAAAGGGACTTGGAGTGCAGATGGCATCCTTCGGTTCTTCCAGACAAGCTGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS CAA 72 bp TTCGGGTTTTCCTTGAAGCTCTTACTATGCTTGCACTaGAACTCCAGCACCATCCTGGTGTACGTGTTGAAG +
Preference number: 6 (lower is better)
Translates to: FGFSLKLLLCLH*NSSTILVYVLK
Trigger: CTTCAACACGTACACCAGGATGGTGCTGGAGTTCAAGTGCAAGCATAGTAAGAGCTTCAAGGAAAACCCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337630.10
ENST00000351606.10
ENST00000396302.7
ENST00000432710.6
ENST00000457134.6
ENST00000537302.5
ENST00000651961.1
CDS CAA 90 bp GAGGCAAACATTTTGAGTCAGTTGAGAGGGATCGCTCATTCACTCTaGCAGCGGGAAGGCAGAGAAGTTTCAGTTTATCTTCTGTTCTGT +
Preference number: 6 (lower is better)
Translates to: EANILSQLRGIAHSL*QREGREVSVYLLFC
Trigger: ACAGAACAGAAGATAAACTGAAACTTCTCTGCCTTCCCGCTGCAAGAGTGAATGAGCGATCCCTCTCAACTGACTCAAAATGTTTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000542415.5
ENST00000545401.5
ENST00000651961.1
CDS TCA 72 bp CCTCCCCTTCTATCTCATATTCTTTGGAGTGCCTCATaGTTAAATGCTGCCTTACAGGGAACACGGGCATTT +
Preference number: 6 (lower is better)
Translates to: PPLLSHILWSAS*LNAALQGTRAF
Trigger: AAATGCCCGTGTTCCCTGTAAGGCAGCATTTAATCATGAGGCACTCCAAAGAATATGAGATAGAAGGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS CCA 72 bp AGAACCGAAGGATGCCATCTGCACTCCAAGTCCCTTTaGTTTAATGTTGCAAGAATGCAAACTGTCTTCCTA +
Preference number: 6 (lower is better)
Translates to: RTEGCHLHSKSL*FNVARMQTVFL
Trigger: TAGGAAGACAGTTTGCATTCTTGCAACATTAAACCAAAGGGACTTGGAGTGCAGATGGCATCCTTCGGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396302.7
CDS CAA 72 bp ATTTTGAGTCAGTTGAGAGGGATCGCTCATTCACTCTaGCAGCGGGAAGGCAGAGAAGTTTCAGTTTATCTT +
Preference number: 6 (lower is better)
Translates to: ILSQLRGIAHSL*QREGREVSVYL
Trigger: AAGATAAACTGAAACTTCTCTGCCTTCCCGCTGCAAGAGTGAATGAGCGATCCCTCTCAACTGACTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351606.10
ENST00000432710.6
ENST00000542415.5
ENST00000545401.5
ENST00000651961.1