RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRSF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000132463

Ensembl transcript IDs: ENST00000254799.11, ENST00000499044.6, ENST00000502323.5, ENST00000505068.5, ENST00000506453.1, ENST00000508091.1, ENST00000514161.5, ENST00000545193.5

Found 426 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCAATATACCTATGATGAACGTGGGACCGATCCTTGAGCATCGCTaGAACAGCATCCTCATGGGTCTCAAAGTGCACATCAGCTTCTCC +
Preference number: 1 (lower is better)
Translates to: FNIPMMNVGPILEHR*NSILMGLKVHISFS
Trigger: GGAGAAGCTGATGTGCACTTTGAGACCCATGAGGATGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACGTTCATCATAGGTATATTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506453.1
3UTR GCA 90 bp ATGAGACCACAATATTCAGCAATCAGCTCCCTGGTATTTACATACTaGTTCTCAGAGTTCTCCCTTGCACTCCGTAAGCAGCAGCTAGGC +
Preference number: 1 (lower is better)
Translates to: MRPQYSAISSLVFTY*FSEFSLALRKQQLG
Trigger: GCCTAGCTGCTGCTTACGGAGTGCAAGGGAGAACTCTGAGAAGCAGTATGTAAATACCAGGGAGCTGATTGCTGAATATTGTGGTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR TCA 90 bp GGATATGAGCACCCTGACCATATGCCCCACTCCCACTATTCTTCCTaGTGGCTTTACCACAAAGGAAGTTATAGACACAAGGAACCCAAA +
Preference number: 1 (lower is better)
Translates to: GYEHPDHMPHSHYSS*WLYHKGSYRHKEPK
Trigger: TTTGGGTTCCTTGTGTCTATAACTTCCTTTGTGGTAAAGCCATCAGGAAGAATAGTGGGAGTGGGGCATATGGTCAGGGTGCTCATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR GCA 90 bp TCTTGGGCATTGGCTTGGAAAGGTAATCCTCTCATGTGGACAAAATaGAGAGAAGACGTAGTTCCAAAATCAGCAGCCTCTGGAAGCTTT +
Preference number: 1 (lower is better)
Translates to: SWALAWKGNPLMWTK*REDVVPKSAASGSF
Trigger: AAAGCTTCCAGAGGCTGCTGATTTTGGAACTACGTCTTCTCTGCATTTTGTCCACATGAGAGGATTACCTTTCCAAGCCAATGCCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506453.1
3UTR TCA 90 bp AACAGAAGGAAATTCACCATCACTGCTTCCTTCAATAGCAAAGAGTaGTGCAAAACAGTCTTCTCAAATGTGGGGAGACGGTACCGTCTT +
Preference number: 1 (lower is better)
Translates to: NRRKFTITASFNSKE*CKTVFSNVGRRYRL
Trigger: AAGACGGTACCGTCTCCCCACATTTGAGAAGACTGTTTTGCATCACTCTTTGCTATTGAAGGAAGCAGTGATGGTGAATTTCCTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR CCA 90 bp CTTCCTTCAATAGCAAAGAGTGATGCAAAACAGTCTTCTCAAATGTaGGGAGACGGTACCGTCTTCCACTTGCATGGAAATAAGATTACT +
Preference number: 1 (lower is better)
Translates to: LPSIAKSDAKQSSQM*GDGTVFHLHGNKIT
Trigger: AGTAATCTTATTTCCATGCAAGTGGAAGACGGTACCGTCTCCCCACATTTGAGAAGACTGTTTTGCATCACTCTTTGCTATTGAAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR TCA 90 bp GTCACCCTGAGAACAGGAACAAGGCAAAGAAAGCATACAGGATTTTaGTTCTCCTACACAGGTGCACATAAAGTTAGTTTATTAATGACT +
Preference number: 1 (lower is better)
Translates to: VTLRTGTRQRKHTGF*FSYTGAHKVSLLMT
Trigger: AGTCATTAATAAACTAACTTTATGTGCACCTGTGTAGGAGAATCAAAATCCTGTATGCTTTCTTTGCCTTGTTCCTGTTCTCAGGGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
3UTR TCA 90 bp AGTAGGCCCCACAGATCTTTTCCACAGCAAATCAGATACCAAATGTaGAAGAGCAACAAAGATCACATTCTAATAGTTCGTACAACTACA +
Preference number: 1 (lower is better)
Translates to: SRPHRSFPQQIRYQM*KSNKDHILIVRTTT
Trigger: TGTAGTTGTACGAACTATTAGAATGTGATCTTTGTTGCTCTTTCACATTTGGTATCTGATTTGCTGTGGAAAAGATCTGTGGGGCCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR TCA 90 bp ATACATACCATTCTCCTCTATACTATAGGTCCTACCAATTCAATGTaGGTGTCTTCCGATAATTTAGGGGAAACTCTCAGAACAATGGAG +
Preference number: 1 (lower is better)
Translates to: IHTILLYTIGPTNSM*VSSDNLGETLRTME
Trigger: CTCCATTGTTCTGAGAGTTTCCCCTAAATTATCGGAAGACACTCACATTGAATTGGTAGGACCTATAGTATAGAGGAGAATGGTATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR TCA 90 bp AGAACTAGAACTGCATCTCCTGGTGGCAGTCGTCACCCTGAGAACAGGAACAAGACCAGTTCAAAGGTCTaGAACCGTTCTTTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: RTRTASPGGSRHPENRNKTSSKV*NRSLLW
Trigger: CCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGT...CTTGTTCCTGTTCTCAGGGTGACGACTGCCACCAGGAGATGCAGTTCTAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
3UTR-3UTR TCA 90 bp TGCTTCTTGCTTCACCCTTATTATCTGGAGCCCCTAGAGTCTTATTTTCCTTTTCGTGGGACCGATCCTTaGGCATCGCTGCAACAGCAT +
Preference number: 2 (lower is better)
Translates to: CFLLHPYYLEPLESYFPFRGTDP*ASLQQH
Trigger: ATGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACG...AAAAGGAAAATAAGACTCTAGGGGCTCCAGATAATAAGGGTGAAGCAAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506453.1
3UTR-3UTR GCA 90 bp TCCAGCAACCTGGTTCCTTGGTATTTACCCAAAGGAGCTGAAAACGAGTCTACAAGCACCCTGACCATATaGCCCACTCCCACTATTCTT +
Preference number: 2 (lower is better)
Translates to: SSNLVPWYLPKGAENESTSTLTI*PTPTIL
Trigger: AAGAATAGTGGGAGTGGGGCATATGGTCAGGGTGCT...TGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACCAAGGAACCAGGTTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR CCA 90 bp CAGTTCAATATACCTATGATGAACGTGGGACCGATCCTTGAGCATCGCTGCAACTCTTGGGCATTGGCTTaGAAAGGTAATCCTCTCATG +
Preference number: 2 (lower is better)
Translates to: QFNIPMMNVGPILEHRCNSWALA*KGNPLM
Trigger: CATGAGAGGATTACCTTTCCAAGCCAATGCCCAAGA...GTTGCAGCGATGCTCAAGGATCGGTCCCACGTTCATCATAGGTATATTGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506453.1
3UTR-3UTR CCA 90 bp GTGGCCTTCCCACTGGAGCTGTATTCCATGGTGATTCTAACAGGCTTGAGTGGAAAGTTTATAATGTCTTaGGCATTGGCTTGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: VAFPLELYSMVILTGLSGKFIMS*ALAWKG
Trigger: ACCTTTCCAAGCCAATGCCCAAGACATTATAAACTT...TCCACTCAAGCCTGTTAGAATCACCATGGAATACAGCTCCAGTGGGAAGGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506453.1
3UTR-3UTR TCA 90 bp TCTACTGCTGACATACATACCATTCTCCTCTATACTATAGGTCCTACCAATTCAGTCCCCCTTCCCACATaGCAGAAGCTTAAGTTACCC +
Preference number: 2 (lower is better)
Translates to: STADIHTILLYTIGPTNSVPLPT*QKLKLP
Trigger: GGGTAACTTAAGCTTCTGTCATGTGGGAAGGGGGAC...TGAATTGGTAGGACCTATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR GCA 90 bp AGCAGATTCATGGCACACAATGTTGCCTTCAAACTGGGTTCCTTATGCTTCCCCCACATACTCTATTTCTaGTTCATTGCCTGGTGTCAA +
Preference number: 2 (lower is better)
Translates to: SRFMAHNVAFKLGSLCFPHILYF*FIAWCQ
Trigger: TTGACACCAGGCAATGAAGCAGAAATAGAGTATGTG...GGGGAAGCATAAGGAACCCAGTTTGAAGGCAACATTGTGTGCCATGAATCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR TCA 90 bp TGTCAATGGGAATTCAAAATAGTCATGTTGGAACAGTTTGGCAGTTTCTTCCAATGGCAGTCGTCACCCTaGGAACAGGAACAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: CQWEFKIVMLEQFGSFFQWQSSP*EQEQGK
Trigger: TTTGCCTTGTTCCTGTTCTCAGGGTGACGACTGCCA...TTGGAAGAAACTGCCAAACTGTTCCAACATGACTATTTTGAATTCCCATTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR TCA 90 bp AGCAGATTCATGGCACACAATGTTGCCTTCAAACTGGGTTCCTTATGCTTCCCCATCAGATACCAAATGTaGAAGAGCAACAAAGATCAC +
Preference number: 2 (lower is better)
Translates to: SRFMAHNVAFKLGSLCFPIRYQM*KSNKDH
Trigger: GTGATCTTTGTTGCTCTTTCACATTTGGTATCTGAT...GGGGAAGCATAAGGAACCCAGTTTGAAGGCAACATTGTGTGCCATGAATCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR CCA 90 bp GATGCAAAACAGTCTTCTCAAATGTGGGGAGACGGTACCGTCTTCCACTTGCATCCAGTTCTCATAGCTTaGCATATTCAACCATATATG +
Preference number: 2 (lower is better)
Translates to: DAKQSSQMWGDGTVFHLHPVLIA*HIQPYM
Trigger: CATATATGGTTGAATATGCCAAGCTATGAGAACTGG...ATGCAAGTGGAAGACGGTACCGTCTCCCCACATTTGAGAAGACTGTTTTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR TCA 90 bp CTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTCACTGTTTCACTCCATaGGAAGTTTTACATCAGAGC +
Preference number: 2 (lower is better)
Translates to: LFCQTIPVQRSETVLCFGHCFTP*EVLHQS
Trigger: GCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTG...ACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
3UTR-3UTR GCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGATCCTTGAGCATCGCTaGAACAGCATCCTCATGGGT +
Preference number: 2 (lower is better)
Translates to: QLTQNTKIISLAVAANKLILEHR*NSILMG
Trigger: ACCCATGAGGATGCTGTTGCAGCGATGCTCAAGGAT...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506453.1
3UTR-3UTR TCA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGCACTGTTTCACTCCATaGGAAGTTTTACATCAGAGC +
Preference number: 2 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALHCFTP*EVLHQS
Trigger: GCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTG...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
3UTR-3UTR TCA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTCACTGTTTCACTCCATaGGAAGTTTTACATCAGAGC +
Preference number: 2 (lower is better)
Translates to: KQKVLPHCDRSTALSINPHCFTP*EVLHQS
Trigger: GCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTG...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
3UTR-3UTR TCA 90 bp AAGCCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTACCAGTTCAAAGGTCTaGAACCGTTCTTTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: KPLIFLPVWTVLTCHFTVTSSKV*NRSLLW
Trigger: CCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGT...AACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
3UTR-3UTR GCA 90 bp AAGAGAAGACATAGTCTCTCTTCCAGGTATCACCTGTCAGAAACCTGGGCAAATTCTGAAACCGTTCTTTaGTTTGGTGAATGTTTGGTT +
Preference number: 2 (lower is better)
Translates to: KRRHSLSSRYHLSETWANSETVL*FGECLV
Trigger: AACCAAACATTCACCAAAGCAAAGAACGGTTTCAGA...ATTTGCCCAGGTTTCTGACAGGTGATACCTGGAAGAGAGACTATGTCTTCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
3UTR-3UTR CCA 90 bp TCTACTGCTGACATACATACCATTCTCCTCTATACTATAGGTCCTACCAATTCAGGCGTGTGCCACACCTaGCTAATTTTTGCATTTTCA +
Preference number: 2 (lower is better)
Translates to: STADIHTILLYTIGPTNSGVCHT*LIFAFS
Trigger: TGAAAATGCAAAAATTAGCCAGGTGTGGCACACGCC...TGAATTGGTAGGACCTATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR TCA 90 bp TGTCAATGGGAATTCAAAATAGTCATGTTGGAACAGTTTGGCAGTTTCTTCCAATCCCACTATTCTTCCTaGTGGCTTTACCACAAAGGA +
Preference number: 2 (lower is better)
Translates to: CQWEFKIVMLEQFGSFFQSHYSS*WLYHKG
Trigger: TCCTTTGTGGTAAAGCCATCAGGAAGAATAGTGGGA...TTGGAAGAAACTGCCAAACTGTTCCAACATGACTATTTTGAATTCCCATTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR GCA 90 bp AATTTGGATTGGAACTCTACTGCTGACATACATACCATTCTCCTCTATACTATAGGGATTACAGGCGTGTaGCACACCTGGCTAATTTTT +
Preference number: 2 (lower is better)
Translates to: NLDWNSTADIHTILLYTIGITGV*HTWLIF
Trigger: AAAAATTAGCCAGGTGTGGCACACGCCTGTAATCCC...TATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGAGTTCCAATCCAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR TCA 90 bp CAGATACCAGTTCTCATAGCTTGGCATATTCAACCATATATGAAAACGCATTTCCACTGTTTCACTCCATaGGAAGTTTTACATCAGAGC +
Preference number: 2 (lower is better)
Translates to: QIPVLIAWHIQPYMKTHFHCFTP*EVLHQS
Trigger: GCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTG...GAAATGCGTTTTCATATATGGTTGAATATGCCAAGCTATGAGAACTGGTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR TCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGCACTGTTTCACTCCATaGGAAGTTTTACATCAGAGC +
Preference number: 2 (lower is better)
Translates to: QLTQNTKIISLAVAANKLHCFTP*EVLHQS
Trigger: GCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTG...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
3UTR CAA 90 bp CACATTCTAATAGTTCGTACAACTACAGATACCAGTTCTCATAGCTaGGCATATTCAACCATATATGAAAACGCATTTCCATCTAGGCAG +
Preference number: 2 (lower is better)
Translates to: HILIVRTTTDTSSHS*AYSTIYENAFPSRQ
Trigger: CTGCCTAGATGGAAATGCGTTTTCATATATGGTTGAATATGCCAAGCTATGAGAACTGGTATCTGTAGTTGTACGAACTATTAGAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR TCA 90 bp ATGAAATGCTTCTTGCTTCACCCTTATTATCTGGAGCCCCTAGAGTCTTATTTTAAAGCTGTCATGGGTTaGATATCCTCATTTACTTCA +
Preference number: 2 (lower is better)
Translates to: MKCFLLHPYYLEPLESYFKAVMG*ISSFTS
Trigger: TGAAGTAAATGAGGATATTCAACCCATGACAGCTTT...AAAATAAGACTCTAGGGGCTCCAGATAATAAGGGTGAAGCAAGAAGCATTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506453.1
3UTR-3UTR GCA 90 bp TGTCAATGGGAATTCAAAATAGTCATGTTGGAACAGTTTGGCAGTTTCTTCCAAGTACCGTCTTCCACTTaGATGGAAATAAGATTACTT +
Preference number: 2 (lower is better)
Translates to: CQWEFKIVMLEQFGSFFQVPSST*MEIRLL
Trigger: AAGTAATCTTATTTCCATGCAAGTGGAAGACGGTAC...TTGGAAGAAACTGCCAAACTGTTCCAACATGACTATTTTGAATTCCCATTGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR CCA 72 bp GACCGATCCTTGAGCATCGCTGCAACAGCATCCTCATaGGTCTCAAAGTGCACATCAGCTTCTCCAGTGGCC +
Preference number: 3 (lower is better)
Translates to: DRSLSIAATASS*VSKCTSASPVA
Trigger: GGCCACTGGAGAAGCTGATGTGCACTTTGAGACCCATGAGGATGCTGTTGCAGCGATGCTCAAGGATCGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506453.1
3UTR GCA 72 bp CCTATGATGAACGTGGGACCGATCCTTGAGCATCGCTaGAACAGCATCCTCATGGGTCTCAAAGTGCACATC +
Preference number: 3 (lower is better)
Translates to: PMMNVGPILEHR*NSILMGLKVHI
Trigger: GATGTGCACTTTGAGACCCATGAGGATGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACGTTCATCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506453.1
3UTR GCA 72 bp GCTAGGCTAAAGCAGGATATGAGCACCCTGACCATATaGCCCACTCCCACTATTCTTCCTGATGGCTTTACC +
Preference number: 3 (lower is better)
Translates to: ARLKQDMSTLTI*PTPTILPDGFT
Trigger: GGTAAAGCCATCAGGAAGAATAGTGGGAGTGGGGCATATGGTCAGGGTGCTCATATCCTGCTTTAGCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR TCA 72 bp GTTCAATATACCTATGATGAACGTGGGACCGATCCTTaGGCATCGCTGCAACAGCATCCTCATGGGTCTCAA +
Preference number: 3 (lower is better)
Translates to: VQYTYDERGTDP*ASLQQHPHGSQ
Trigger: TTGAGACCCATGAGGATGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACGTTCATCATAGGTATATTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506453.1
3UTR TCA 72 bp CACCCTGACCATATGCCCCACTCCCACTATTCTTCCTaGTGGCTTTACCACAAAGGAAGTTATAGACACAAG +
Preference number: 3 (lower is better)
Translates to: HPDHMPHSHYSS*WLYHKGSYRHK
Trigger: CTTGTGTCTATAACTTCCTTTGTGGTAAAGCCATCAGGAAGAATAGTGGGAGTGGGGCATATGGTCAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR CAA 90 bp TGTCAATGGGAATTCAAAATAGTCATGTTGGAACAGTTTGGCAGTTTCTTCCAAAGCGATTCTCCTGCCTaGGCCTCCCAAGTAACTGGG +
Preference number: 3 (lower is better)
Translates to: CQWEFKIVMLEQFGSFFQSDSPA*ASQVTG
Trigger: CCCAGTTACTTGGGAGGCCAAGGCAGGAGAATCGCT...TTGGAAGAAACTGCCAAACTGTTCCAACATGACTATTTTGAATTCCCATTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR GCA 72 bp CAATATTCAGCAATCAGCTCCCTGGTATTTACATACTaGTTCTCAGAGTTCTCCCTTGCACTCCGTAAGCAG +
Preference number: 3 (lower is better)
Translates to: QYSAISSLVFTY*FSEFSLALRKQ
Trigger: CTGCTTACGGAGTGCAAGGGAGAACTCTGAGAAGCAGTATGTAAATACCAGGGAGCTGATTGCTGAATATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR GCA 72 bp TGGCCACATTTTGTACAGAAAACTCAGCCTGTAGCGTaGCAAGAAGATATATCCTTTCAACCTTACCCATCC +
Preference number: 3 (lower is better)
Translates to: WPHFVQKTQPVA*QEDISFQPYPS
Trigger: GGATGGGTAAGGTTGAAAGGATATATCTTCTTGGCACGCTACAGGCTGAGTTTTCTGTACAAAATGTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR CCA 72 bp ATAGCAAAGAGTGATGCAAAACAGTCTTCTCAAATGTaGGGAGACGGTACCGTCTTCCACTTGCATGGAAAT +
Preference number: 3 (lower is better)
Translates to: IAKSDAKQSSQM*GDGTVFHLHGN
Trigger: ATTTCCATGCAAGTGGAAGACGGTACCGTCTCCCCACATTTGAGAAGACTGTTTTGCATCACTCTTTGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR TCA 72 bp AAATTCACCATCACTGCTTCCTTCAATAGCAAAGAGTaGTGCAAAACAGTCTTCTCAAATGTGGGGAGACGG +
Preference number: 3 (lower is better)
Translates to: KFTITASFNSKE*CKTVFSNVGRR
Trigger: CCGTCTCCCCACATTTGAGAAGACTGTTTTGCATCACTCTTTGCTATTGAAGGAAGCAGTGATGGTGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR CAA 90 bp GGTATTTACCCAAAGGAGCTGAAAACGAGTCTACACAAAAACCTGCACATAAATTCTAATTTGCTGAACTaGGGGAGTGGGAGGGTAATG +
Preference number: 3 (lower is better)
Translates to: GIYPKELKTSLHKNLHINSNLLN*GSGRVM
Trigger: CATTACCCTCCCACTCCCCAAGTTCAGCAAATTAGA...ATTTATGTGCAGGTTTTTGTGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR TCA 72 bp AAGGGACAGGAGAGAGAGGTGCAGGAATTGACTAGGTaGAAAAATTCAGATGTAATACAGATGTTCCAGACA +
Preference number: 3 (lower is better)
Translates to: KGQEREVQELTR*KNSDVIQMFQT
Trigger: TGTCTGGAACATCTGTATTACATCTGAATTTTTTCACCTAGTCAATTCCTGCACCTCTCTCTCCTGTCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR GCA 72 bp ATGTTGATTAATAAGCAGATTCATGGCACACAATGTTaGCTTCAAACTGGGTTCCTTATGCTTCCCCCTTCA +
Preference number: 3 (lower is better)
Translates to: MLINKQIHGTQC*LQTGFLMLPPS
Trigger: TGAAGGGGGAAGCATAAGGAACCCAGTTTGAAGGCAACATTGTGTGCCATGAATCTGCTTATTAATCAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR CCA 72 bp CATACTCTTAACTTACAATCCAGCAACCTGGTTCCTTaGTATTTACCCAAAGGAGCTGAAAACGAGTCTACA +
Preference number: 3 (lower is better)
Translates to: HTLNLQSSNLVP*YLPKGAENEST
Trigger: TGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACCAAGGAACCAGGTTGCTGGATTGTAAGTTAAGAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR CAA 90 bp TCTACTGCTGACATACATACCATTCTCCTCTATACTATAGGTCCTACCAATTCAAAAGCATACAGGATTTaGATTCTCCTACACAGGTGC +
Preference number: 3 (lower is better)
Translates to: STADIHTILLYTIGPTNSKAYRI*ILLHRC
Trigger: GCACCTGTGTAGGAGAATCAAAATCCTGTATGCTTT...TGAATTGGTAGGACCTATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR CAA 90 bp GGTATTTACCCAAAGGAGCTGAAAACGAGTCTACACAAAAACCTGCACATAAATGGTACCGTCTTCCACTaGCATGGAAATAAGATTACT +
Preference number: 3 (lower is better)
Translates to: GIYPKELKTSLHKNLHINGTVFH*HGNKIT
Trigger: AGTAATCTTATTTCCATGCAAGTGGAAGACGGTACC...ATTTATGTGCAGGTTTTTGTGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR TCA 72 bp AGGGATGGGTATTGGCATCACCAAGATTTTATATACTaGCAGAAAATGATCTTTAGGGTGTTTAGGTGGGAG +
Preference number: 3 (lower is better)
Translates to: RDGYWHHQDFIY*QKMIFRVFRWE
Trigger: CTCCCACCTAAACACCCTAAAGATCATTTTCTGTCAGTATATAAAATCTTGGTGATGCCAATACCCATCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR CAA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGCAAATGAAATGCTTCTaGCTTCACCCTTATTATCTG +
Preference number: 3 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALQMKCF*LHPYYL
Trigger: CAGATAATAAGGGTGAAGCAAGAAGCATTTCATTTG...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
3UTR-3UTR CAA 90 bp TGCTTCTTGCTTCACCCTTATTATCTGGAGCCCCTAGAGTCTTATTTTCCTTTTCAAATGAAATGCTTCTaGCTTCACCCTTATTATCTG +
Preference number: 3 (lower is better)
Translates to: CFLLHPYYLEPLESYFPFQMKCF*LHPYYL
Trigger: CAGATAATAAGGGTGAAGCAAGAAGCATTTCATTTG...AAAAGGAAAATAAGACTCTAGGGGCTCCAGATAATAAGGGTGAAGCAAGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506453.1
3UTR-3UTR CAA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGACAAATGAAATGCTTCTaGCTTCACCCTTATTATCTG +
Preference number: 3 (lower is better)
Translates to: ISLAVAANKLELYIPSPRQMKCF*LHPYYL
Trigger: CAGATAATAAGGGTGAAGCAAGAAGCATTTCATTTG...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
3UTR CCA 72 bp AAGCATGGCAAAATGCTGCTTGTACAATCTAAGGGATaGGTATTGGCATCACCAAGATTTTATATACTGACA +
Preference number: 3 (lower is better)
Translates to: KHGKMLLVQSKG*VLASPRFYILT
Trigger: TGTCAGTATATAAAATCTTGGTGATGCCAATACCCATCCCTTAGATTGTACAAGCAGCATTTTGCCATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
3UTR-3UTR CAA 90 bp AAGCCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTCATAAAACCGCCAAATaGTCATTTACACTAAGCTGT +
Preference number: 3 (lower is better)
Translates to: KPLIFLPVWTVLTCHFTVHKTAK*SFTLSC
Trigger: ACAGCTTAGTGTAAATGACAATTTGGCGGTTTTATG...AACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
3UTR-3UTR CAA 90 bp TCTAGAGCTGGTTTAAATTCAAGTGAAGCCATTAATTTTCTTACCAGTCTGGACCAAATGAAATGCTTCTaGCTTCACCCTTATTATCTG +
Preference number: 3 (lower is better)
Translates to: SRAGLNSSEAINFLTSLDQMKCF*LHPYYL
Trigger: CAGATAATAAGGGTGAAGCAAGAAGCATTTCATTTG...GTCCAGACTGGTAAGAAAATTAATGGCTTCACTTGAATTTAAACCAGCTCTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
3UTR-3UTR CAA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACAAATGAAATGCTTCTaGCTTCACCCTTATTATCTG +
Preference number: 3 (lower is better)
Translates to: LTQNTKIISLAVAANKLEQMKCF*LHPYYL
Trigger: CAGATAATAAGGGTGAAGCAAGAAGCATTTCATTTG...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
3UTR GCA 72 bp CAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTaGTTTGGTGAATGTTTGGTTAAAATAAATCACTGT +
Preference number: 3 (lower is better)
Translates to: QTIPVQRSETVL*FGECLVKINHC
Trigger: ACAGTGATTTATTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp GATGCAAAACAGTCTTCTCAAATGTGGGGAGACGGTACCGTCTTCCACTTGCATGCCGCCGCCAGCGACTaGGGCAGCAGAGAGGCACGG +
Preference number: 4 (lower is better)
Translates to: DAKQSSQMWGDGTVFHLHAAASD*GSREAR
Trigger: CCGTGCCTCTCTGCTGCCGCAGTCGCTGGCGGCGGC...ATGCAAGTGGAAGACGGTACCGTCTCCCCACATTTGAGAAGACTGTTTTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp AGAACTAGAACTGCATCTCCTGGTGGCAGTCGTCACCCTGAGAACAGGAACAAGAGGTGGAGGTTGCAGTaGGCCAAGACCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: RTRTASPGGSRHPENRNKRWRLQ*AKTRPL
Trigger: CAGTGGCCTGGTCTTGGCTCACTGCAACCTCCACCT...CTTGTTCCTGTTCTCAGGGTGACGACTGCCACCAGGAGATGCAGTTCTAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp AGAACTAGAACTGCATCTCCTGGTGGCAGTCGTCACCCTGAGAACAGGAACAAGGGCAGGAGACTCCCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RTRTASPGGSRHPENRNKGRRLP*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGGGAGTCTCCTGCC...CTTGTTCCTGTTCTCAGGGTGACGACTGCCACCAGGAGATGCAGTTCTAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp AGCAGATTCATGGCACACAATGTTGCCTTCAAACTGGGTTCCTTATGCTTCCCCGGGCCTGAAGGCAGCTaGTCCAGCAGCGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: SRFMAHNVAFKLGSLCFPGPEGS*SSSDGG
Trigger: TCCACCATCGCTGCTGGAGCAGCTGCCTTCAGGCCC...GGGGAAGCATAAGGAACCCAGTTTGAAGGCAACATTGTGTGCCATGAATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGACTCCTGGCTGTAGCTaGGCGTCGGGACGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVTPGCS*ASGRRP
Trigger: CGGCCGCCGTCCCGACGCGCAGCTACAGCCAGGAGT...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR GCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAGGACGGGGGCGGGTGTaGGGCGAGTGTCGCGGATCC +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCAGRGRV*GECRGS
Trigger: GGATCCGCGACACTCGCCGCACACCCGCCCCCGTCC...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000499044.6
CDS-3UTR GCA 90 bp CTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGTACCTGGCTGTAGCTaGGCGTCGGGACGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: LFCQTIPVQRSETVLCFGVPGCS*ASGRRP
Trigger: CGGCCGCCGTCCCGACGCGCAGCTACAGCCAGGTAC...ACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499044.6
CDS-3UTR CCA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTAGCGCGTGCCGGCCATaGACTCCGGAGGCGGCGCAG +
Preference number: 4 (lower is better)
Translates to: KQKVLPHCDRSTALSINPSACRP*TPEAAQ
Trigger: CTGCGCCGCCTCCGGAGTCCATGGCCGGCACGCGCT...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR GCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCCGGTGCGCCGGCAGCTaGTGCAGTTACAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCRCAGS*CSYSRS
Trigger: GCTGCGGCTGTAACTGCAGCAGCTGCCGGCGCACCG...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR GCA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTACTCCTGGCTGTAGCTaGGCGTCGGGACGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: KQKVLPHCDRSTALSINPTPGCS*ASGRRP
Trigger: CGGCCGCCGTCCCGACGCGCAGCTACAGCCAGGAGT...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
3UTR CAA 72 bp TCCCAGCTACTCGGGAATCTGAGGCATGAGAATTGCTaGAAACTGGGAGGTGGAGGCTGTAATGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SQLLGNLRHENC*KLGGGGCNELG
Trigger: TCCCAGCTCATTACAGCCTCCACCTCCCAGTTTCAAGCAATTCTCATGCCTCAGATTCCCGAGTAGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp TCCAGCAACCTGGTTCCTTGGTATTTACCCAAAGGAGCTGAAAACGAGTCTACAGGCTCACTGCAGGCTTaGCTTCCCAGGCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SSNLVPWYLPKGAENESTGSLQA*LPRLKQ
Trigger: CTGCTTGAGCCTGGGAAGTCAAGCCTGCAGTGAGCC...TGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACCAAGGAACCAGGTTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCACGAGTACCCAGCGCGTaGCGGCCATGGACTCCGGAG +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCARVPSA*RPWTPE
Trigger: CTCCGGAGTCCATGGCCGGCACGCGCTGGGTACTCG...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR GCA 90 bp CCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTTTGCGGTGCGCCGGCAGCTaGTGCAGTTACAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PLIFLPVWTVLTCHFTVLRCAGS*CSYSRS
Trigger: GCTGCGGCTGTAACTGCAGCAGCTGCCGGCGCACCG...CAAAACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR GCA 90 bp GAGCATCGCTGCAACAGCATCCTCATGGGTCTCAAAGTGCACATCAGCTTCTCCTTCTCTAAGGCTTTCTaGACATCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: EHRCNSILMGLKVHISFSFSKAF*TSCSDS
Trigger: GGAGTCAGAGCAGGATGTGCAGAAAGCCTTAGAGAA...GGAGAAGCTGATGTGCACTTTGAGACCCATGAGGATGCTGTTGCAGCGATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506453.1
CDS-3UTR CCA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACAGCGCGTGCCGGCCATaGACTCCGGAGGCGGCGCAG +
Preference number: 4 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHSACRP*TPEAAQ
Trigger: CTGCGCCGCCTCCGGAGTCCATGGCCGGCACGCGCT...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR CCA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTAATAGGAGCACAGGGTaGACGGGGGCGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: KQKVLPHCDRSTALSINPNRSTG*TGAGVR
Trigger: CCGCACACCCGCCCCCGTCCACCCTGTGCTCCTATT...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000499044.6
CDS-3UTR TCA 90 bp AAGAGAAGACATAGTCTCTCTTCCAGGTATCACCTGTCAGAAACCTGGGCAAATCGTGGGACCGATCCTTaGGCATCGCTGCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: KRRHSLSSRYHLSETWANRGTDP*ASLQQH
Trigger: ATGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACG...ATTTGCCCAGGTTTCTGACAGGTGATACCTGGAAGAGAGACTATGTCTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR CCA 90 bp GTGGCCTTCCCACTGGAGCTGTATTCCATGGTGATTCTAACAGGCTTGAGTGGAAAAATCAGCAGCCTCTaGAAGCTTTTCTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: VAFPLELYSMVILTGLSGKISSL*KLFWHL
Trigger: GAGGTGCCAGAAAAGCTTCCAGAGGCTGCTGATTTT...TCCACTCAAGCCTGTTAGAATCACCATGGAATACAGCTCCAGTGGGAAGGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506453.1
CDS-3UTR CCA 90 bp AGCAGATTCATGGCACACAATGTTGCCTTCAAACTGGGTTCCTTATGCTTCCCCGTGCAGCAACAGTCATaGCTCACTGCAGGCTTGACT +
Preference number: 4 (lower is better)
Translates to: SRFMAHNVAFKLGSLCFPVQQQS*LTAGLT
Trigger: AGTCAAGCCTGCAGTGAGCCATGACTGTTGCTGCAC...GGGGAAGCATAAGGAACCCAGTTTGAAGGCAACATTGTGTGCCATGAATCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATCAGCTCGTCTTTCCCTaGGGACAGGAGAGGGAACGG +
Preference number: 4 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNQLVFP*GQERER
Trigger: CCGTTCCCTCTCCTGTCCCCAGGGAAAGACGAGCTG...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502323.5
CDS-3UTR CCA 90 bp TGGACAAAATGCAGAGAAGACGTAGTTCCAAAATCAGCAGCCTCTGGAAGCTTTCATCAGCTTCTCCAGTaGCCTTCCCACTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: WTKCREDVVPKSAASGSFHQLLQ*PSHWSC
Trigger: ACAGCTCCAGTGGGAAGGCCACTGGAGAAGCTGATG...AAAGCTTCCAGAGGCTGCTGATTTTGGAACTACGTCTTCTCTGCATTTTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506453.1
CDS-3UTR CCA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATAGAAGACCCGACGCCTaGGAGAGCTTCCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNRRPDA*ESFPCS
Trigger: GGAACAAGGGAAGCTCTCCCAGGCGTCGGGTCTTCT...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000499044.6
ENST00000514161.5
CDS-3UTR TCA 90 bp AAGAGAAGACATAGTCTCTCTTCCAGGTATCACCTGTCAGAAACCTGGGCAAATGACCAGGGCAGTCCTTaGGCTCGAATGAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: KRRHSLSSRYHLSETWANDQGSP*ARMRKT
Trigger: TGTCTTTCTCATTCGAGCTCAAGGACTGCCCTGGTC...ATTTGCCCAGGTTTCTGACAGGTGATACCTGGAAGAGAGACTATGTCTTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR TCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCACGTGGGACCGATCCTTaGGCATCGCTGCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCARGTDP*ASLQQH
Trigger: ATGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACG...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp AGAACTAGAACTGCATCTCCTGGTGGCAGTCGTCACCCTGAGAACAGGAACAAGCACTGTTTCACTCCATaGGAAGTTTTACATCAGAGC +
Preference number: 4 (lower is better)
Translates to: RTRTASPGGSRHPENRNKHCFTP*EVLHQS
Trigger: GCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTG...CTTGTTCCTGTTCTCAGGGTGACGACTGCCACCAGGAGATGCAGTTCTAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR TCA 90 bp AAGAGAAGACATAGTCTCTCTTCCAGGTATCACCTGTCAGAAACCTGGGCAAATGTCCCCCTTCCCACATaGCAGAAGCTTAAGTTACCC +
Preference number: 4 (lower is better)
Translates to: KRRHSLSSRYHLSETWANVPLPT*QKLKLP
Trigger: GGGTAACTTAAGCTTCTGTCATGTGGGAAGGGGGAC...ATTTGCCCAGGTTTCTGACAGGTGATACCTGGAAGAGAGACTATGTCTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp AAGAGAAGACATAGTCTCTCTTCCAGGTATCACCTGTCAGAAACCTGGGCAAATGCTGGCCCATGTACATaGGGTGCTTCTCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: KRRHSLSSRYHLSETWANAGPCT*GASLRL
Trigger: AAGCCTTAGAGAAGCACCGCATGTACATGGGCCAGC...ATTTGCCCAGGTTTCTGACAGGTGATACCTGGAAGAGAGACTATGTCTTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR GCA 90 bp GCTTGGAAAGGTAATCCTCTCATGTGGACAAAATGCAGAGAAGACGTAGTTCCAGCTGGCCCATGTACATaGGGTGCTTCTCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: AWKGNPLMWTKCREDVVPAGPCT*GASLRL
Trigger: AAGCCTTAGAGAAGCACCGCATGTACATGGGCCAGC...TGGAACTACGTCTTCTCTGCATTTTGTCCACATGAGAGGATTACCTTTCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506453.1
CDS-3UTR GCA 90 bp GATGCAAAACAGTCTTCTCAAATGTGGGGAGACGGTACCGTCTTCCACTTGCATTCATGGGTCTCAAAGTaGACATCAGCTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: DAKQSSQMWGDGTVFHLHSWVSK*TSASPV
Trigger: CACTGGAGAAGCTGATGTGCACTTTGAGACCCATGA...ATGCAAGTGGAAGACGGTACCGTCTCCCCACATTTGAGAAGACTGTTTTGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp GTGCTTCTCTTCCTTTCCCATAACTACATCCACCTTAGCAATCACTTACGTACTGCTCGCTACAACCTCTaGCTCCCAGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: VLLFLSHNYIHLSNHLRTARYNL*LPGSSD
Trigger: ATCGCTTGAACCTGGGAGGCAGAGGTTGTAGCGAGC...AGTACGTAAGTGATTGCTAAGGTGGATGTAGTTATGGGAAAGGAAGAGAAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGACTTCCACATACCGCTaGCCCATGTACATGCGGTGC +
Preference number: 4 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVTSTYR*PMYMRC
Trigger: GCACCGCATGTACATGGGCCAGCGGTATGTGGAAGT...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTACTTCCACATACCGCTaGCCCATGTACATGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LFCQTIPVQRSETVLCFGTSTYR*PMYMRC
Trigger: GCACCGCATGTACATGGGCCAGCGGTATGTGGAAGT...ACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCCATCAGCTTCTCCAGTaGCCTTCCCACTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCHQLLQ*PSHWSC
Trigger: ACAGCTCCAGTGGGAAGGCCACTGGAGAAGCTGATG...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp AAGAGAAGACATAGTCTCTCTTCCAGGTATCACCTGTCAGAAACCTGGGCAAATCAGGCTGGAGTGCAATaGTGTGATCTTGGCTCGCTA +
Preference number: 4 (lower is better)
Translates to: KRRHSLSSRYHLSETWANQAGVQ*CDLGSL
Trigger: TAGCGAGCCAAGATCACACCATTGCACTCCAGCCTG...ATTTGCCCAGGTTTCTGACAGGTGATACCTGGAAGAGAGACTATGTCTTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAGGGAACGGCGCGATaGGGACAGGCTCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: QLTQNTKIISLAVAANKLEGTAR*GQAPSL
Trigger: TAGGGAAGGAGCCTGTCCCCATCGCGCCGTTCCCTC...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502323.5
CDS-3UTR TCA 90 bp AGCAGATTCATGGCACACAATGTTGCCTTCAAACTGGGTTCCTTATGCTTCCCCGTCCTTGAGCTCGAATaGGAAAGACATCATCCACTT +
Preference number: 4 (lower is better)
Translates to: SRFMAHNVAFKLGSLCFPVLELE*ERHHPL
Trigger: AAGTGGATGATGTCTTTCTCATTCGAGCTCAAGGAC...GGGGAAGCATAAGGAACCCAGTTTGAAGGCAACATTGTGTGCCATGAATCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATTGGCAGTCGTCACCCTaGGAACAGGAACAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNWQSSP*EQEQGK
Trigger: TTTGCCTTGTTCCTGTTCTCAGGGTGACGACTGCCA...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR TCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCTGGCAGTCGTCACCCTaGGAACAGGAACAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCWQSSP*EQEQGK
Trigger: TTTGCCTTGTTCCTGTTCTCAGGGTGACGACTGCCA...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR TCA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAGTGGAGTTGCAGAGGTaGCCTTCAGTAAACCGGGAC +
Preference number: 4 (lower is better)
Translates to: ISLAVAANKLELYIPSPRVELQR*PSVNRD
Trigger: GTCCCGGTTTACTGAAGGTCACCTCTGCAACTCCAC...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502323.5
CDS-3UTR GCA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGCTGGCCCATGTACATaGGGTGCTTCTCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNAGPCT*GASLRL
Trigger: AAGCCTTAGAGAAGCACCGCATGTACATGGGCCAGC...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTCTAACAGTAGCTGACTaGCAGGGGAGGGAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: KQKVLPHCDRSTALSINPLTVAD*QGREEG
Trigger: CCCTTCTTCCCTCCCCTGGCAGTCAGCTACTGTTAG...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCACAGCCACACTTACACTaGCCAACCGACCAGAGACTC +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCAQPHLH*PTDQRL
Trigger: GAGTCTCTGGTCGGTTGGGCAGTGTAAGTGTGGCTG...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514161.5
CDS-3UTR CCA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGACTTCCACATACCGCTaGCCCATGTACATGCGGTGC +
Preference number: 4 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALTSTYR*PMYMRC
Trigger: GCACCGCATGTACATGGGCCAGCGGTATGTGGAAGT...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGACTTCCACATACCGCTaGCCCATGTACATGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMTSTYR*PMYMRC
Trigger: GCACCGCATGTACATGGGCCAGCGGTATGTGGAAGT...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGCATCAGCTTCTCCAGTaGCCTTCCCACTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALHQLLQ*PSHWSC
Trigger: ACAGCTCCAGTGGGAAGGCCACTGGAGAAGCTGATG...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TCCAGCAACCTGGTTCCTTGGTATTTACCCAAAGGAGCTGAAAACGAGTCTACAGAAGTAGTGAGAATTTaGAGCCTTCCTCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SSNLVPWYLPKGAENESTEVVRI*SLPPRE
Trigger: TTCCCTGGGAGGAAGGCTCCAAATTCTCACTACTTC...TGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACCAAGGAACCAGGTTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGAACTCCAATGACGGCTaGGTGTGGTGGCTGATGCCT +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMNSNDG*VWWLMP
Trigger: AGGCATCAGCCACCACACCCAGCCGTCATTGGAGTT...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAGACCAGGGCAGTCCTTaGGCTCGAATGAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCADQGSP*ARMRKT
Trigger: TGTCTTTCTCATTCGAGCTCAAGGACTGCCCTGGTC...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAACGTGGGACCGATCCTTaGGCATCGCTGCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKRGTDP*ASLQQH
Trigger: ATGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACG...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGCGTGGGACCGATCCTTaGGCATCGCTGCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: QLTQNTKIISLAVAANKLRGTDP*ASLQQH
Trigger: ATGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACG...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp AAGAGAAGACATAGTCTCTCTTCCAGGTATCACCTGTCAGAAACCTGGGCAAATCTAATCTTGAACTCCTaGCCTCAAGTGACCCACCAT +
Preference number: 4 (lower is better)
Translates to: KRRHSLSSRYHLSETWANLILNS*PQVTHH
Trigger: ATGGTGGGTCACTTGAGGTCAGGAGTTCAAGATTAG...ATTTGCCCAGGTTTCTGACAGGTGATACCTGGAAGAGAGACTATGTCTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp AGCAGATTCATGGCACACAATGTTGCCTTCAAACTGGGTTCCTTATGCTTCCCCTTGGAACTCTACTGCTaGCATACATACCATTCTCCT +
Preference number: 4 (lower is better)
Translates to: SRFMAHNVAFKLGSLCFPLELYC*HTYHSP
Trigger: AGGAGAATGGTATGTATGTCAGCAGTAGAGTTCCAA...GGGGAAGCATAAGGAACCCAGTTTGAAGGCAACATTGTGTGCCATGAATCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATTCTCTTCTAATTTGCTaGACTTGGGGAGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNSLLIC*TWGVGG
Trigger: CCCTCCCACTCCCCAAGTTCAGCAAATTAGAAGAGA...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp GATGCAAAACAGTCTTCTCAAATGTGGGGAGACGGTACCGTCTTCCACTTGCATGGCAGATTAAGTATATaGAAAGGTGCTCCACATCAC +
Preference number: 4 (lower is better)
Translates to: DAKQSSQMWGDGTVFHLHGRLSI*KGAPHH
Trigger: GTGATGTGGAGCACCTTTTCATATACTTAATCTGCC...ATGCAAGTGGAAGACGGTACCGTCTCCCCACATTTGAGAAGACTGTTTTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAGCTGGCCCATGTACATaGGGTGCTTCTCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCAAGPCT*GASLRL
Trigger: AAGCCTTAGAGAAGCACCGCATGTACATGGGCCAGC...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGGCTGGCCCATGTACATaGGGTGCTTCTCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMAGPCT*GASLRL
Trigger: AAGCCTTAGAGAAGCACCGCATGTACATGGGCCAGC...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGATCACTCAGGCTGGAGTaGAGCAACAGTCATGGCTCA +
Preference number: 4 (lower is better)
Translates to: ISLAVAANKLELYIPSPRSLRLE*SNSHGS
Trigger: TGAGCCATGACTGTTGCTGCACTCCAGCCTGAGTGA...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCATACTCAGGGGGTGGTaGAAGGTCTTCCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCILRGW*KVFQVS
Trigger: ACTTACCTGGAAGACCTTCCACCACCCCCTGAGTAT...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGTTCATACTCAGGGGGTaGTGGAAGGTCTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVFILRG*WKVFQV
Trigger: TACCTGGAAGACCTTCCACCACCCCCTGAGTATGAA...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATTTCATACTCAGGGGGTaGTGGAAGGTCTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNFILRG*WKVFQV
Trigger: TACCTGGAAGACCTTCCACCACCCCCTGAGTATGAA...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TCTACTGCTGACATACATACCATTCTCCTCTATACTATAGGTCCTACCAATTCACATCAGCTTCTCCAGTaGCCTTCCCACTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: STADIHTILLYTIGPTNSHQLLQ*PSHWSC
Trigger: ACAGCTCCAGTGGGAAGGCCACTGGAGAAGCTGATG...TGAATTGGTAGGACCTATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp CCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTTTGCATCAGCTTCTCCAGTaGCCTTCCCACTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PLIFLPVWTVLTCHFTVLHQLLQ*PSHWSC
Trigger: ACAGCTCCAGTGGGAAGGCCACTGGAGAAGCTGATG...CAAAACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CCA 90 bp GCTTGGAAAGGTAATCCTCTCATGTGGACAAAATGCAGAGAAGACGTAGTTCCAGCAACAGCATCCTCATaGGTCTCAAAGTGCACATCA +
Preference number: 4 (lower is better)
Translates to: AWKGNPLMWTKCREDVVPATASS*VSKCTS
Trigger: TGATGTGCACTTTGAGACCCATGAGGATGCTGTTGC...TGGAACTACGTCTTCTCTGCATTTTGTCCACATGAGAGGATTACCTTTCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506453.1
CDS-3UTR CCA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAAAGAAGACCCGACGCCTaGGAGAGCTTCCCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKRRPDA*ESFPCS
Trigger: GGAACAAGGGAAGCTCTCCCAGGCGTCGGGTCTTCT...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000499044.6
ENST00000514161.5
3UTR CAA 72 bp CCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTTaGAGACTAACAAACACCCTTAGGTCTACCCCAAAC +
Preference number: 4 (lower is better)
Translates to: PVWTVLTCHFTV*RLTNTLRSTPN
Trigger: GTTTGGGGTAGACCTAAGGGTGTTTGTTAGTCTCAAAACTGTGAAGTGACATGTCAGAACAGTCCAGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR TCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCCCACAGGCGAAGATTTaGCCTGCAAGCTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCPQAKI*PASSSL
Trigger: TAATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGG...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACCGTGGGACCGATCCTTaGGCATCGCTGCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHRGTDP*ASLQQH
Trigger: ATGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACG...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp TCTACTGCTGACATACATACCATTCTCCTCTATACTATAGGTCCTACCAATTCAACTCCTGACCTCAAGTaGCCCACCATGGAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: STADIHTILLYTIGPTNSTPDLK*PTMEGF
Trigger: AAAACCCTCCATGGTGGGTCACTTGAGGTCAGGAGT...TGAATTGGTAGGACCTATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp AAGCCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTGGCATGAGAATTGCTTaGAACTGGGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KPLIFLPVWTVLTCHFTVGMRIA*NWEVEA
Trigger: AGCCTCCACCTCCCAGTTTCAAGCAATTCTCATGCC...AACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGATCCTTGAGCATCGCTaGAACAGCATCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMILEHR*NSILMG
Trigger: ACCCATGAGGATGCTGTTGCAGCGATGCTCAAGGAT...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAATCCTTGAGCATCGCTaGAACAGCATCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCAILEHR*NSILMG
Trigger: ACCCATGAGGATGCTGTTGCAGCGATGCTCAAGGAT...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp AAGAGAAGACATAGTCTCTCTTCCAGGTATCACCTGTCAGAAACCTGGGCAAATCATGGCACACAATGTTaGCTTCAAACTGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: KRRHSLSSRYHLSETWANHGTQC*LQTGFL
Trigger: AAGGAACCCAGTTTGAAGGCAACATTGTGTGCCATG...ATTTGCCCAGGTTTCTGACAGGTGATACCTGGAAGAGAGACTATGTCTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCCAAGACCAGGCCACTaGACTCTAGCCTGGGCGATA +
Preference number: 4 (lower is better)
Translates to: QNLKLFCQTIPVQRSETVPRPGH*TLAWAI
Trigger: TATCGCCCAGGCTAGAGTGCAGTGGCCTGGTCTTGG...AACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTTCATACTCAGGGGGTaGTGGAAGGTCTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMFILRG*WKVFQV
Trigger: TACCTGGAAGACCTTCCACCACCCCCTGAGTATGAA...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp AAGAGAAGACATAGTCTCTCTTCCAGGTATCACCTGTCAGAAACCTGGGCAAATTGTTTCAACAGGGCTTaGTTGGCCATTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KRRHSLSSRYHLSETWANCFNRA*LAISGS
Trigger: AGAACCAGAAATGGCCAACCAAGCCCTGTTGAAACA...ATTTGCCCAGGTTTCTGACAGGTGATACCTGGAAGAGAGACTATGTCTTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR CCA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGCTCTGGAAGCTTTTCTaGCACCTCCTTAGGCAATTC +
Preference number: 4 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVLWKLF*HLLRQF
Trigger: GAATTGCCTAAGGAGGTGCCAGAAAAGCTTCCAGAG...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAAAATCAGCAGCCTCTaGAAGCTTTTCTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCKISSL*KLFWHL
Trigger: GAGGTGCCAGAAAAGCTTCCAGAGGCTGCTGATTTT...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAAAATCAGCAGCCTCTaGAAGCTTTTCTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVKISSL*KLFWHL
Trigger: GAGGTGCCAGAAAAGCTTCCAGAGGCTGCTGATTTT...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCGCAACAGCATCCTCATaGGTCTCAAAGTGCACATCA +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCATASS*VSKCTS
Trigger: TGATGTGCACTTTGAGACCCATGAGGATGCTGTTGC...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp AGAACTAGAACTGCATCTCCTGGTGGCAGTCGTCACCCTGAGAACAGGAACAAGCACCTGTCAGAAACCTaGGCAAATTTAATTTTAAGA +
Preference number: 4 (lower is better)
Translates to: RTRTASPGGSRHPENRNKHLSET*ANLILR
Trigger: TCTTAAAATTAAATTTGCCCAGGTTTCTGACAGGTG...CTTGTTCCTGTTCTCAGGGTGACGACTGCCACCAGGAGATGCAGTTCTAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR CCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAAGGCAGGCAAATGACTaGAGGCCAGGAGTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLERQAND*RPGVPD
Trigger: GTCTGGAACTCCTGGCCTCCAGTCATTTGCCTGCCT...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp CTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGTCCTTGAGCTCGAATaGGAAAGACATCATCCACTT +
Preference number: 4 (lower is better)
Translates to: LFCQTIPVQRSETVLCFGVLELE*ERHHPL
Trigger: AAGTGGATGATGTCTTTCTCATTCGAGCTCAAGGAC...ACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CAGCAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGACCAGGGCAGTCCTTaGGCTCGAATGAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: QQNLKLFCQTIPVQRSETDQGSP*ARMRKT
Trigger: TGTCTTTCTCATTCGAGCTCAAGGACTGCCCTGGTC...GGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGACCAGGGCAGTCCTTaGGCTCGAATGAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: QLTQNTKIISLAVAANKLDQGSP*ARMRKT
Trigger: TGTCTTTCTCATTCGAGCTCAAGGACTGCCCTGGTC...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGCCACAGGCGAAGATTTaGCCTGCAAGCTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMPQAKI*PASSSL
Trigger: TAATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGG...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGACCACAGGCGAAGATTTaGCCTGCAAGCTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: ISLAVAANKLELYIPSPRPQAKI*PASSSL
Trigger: TAATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGG...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp AAGAGAAGACATAGTCTCTCTTCCAGGTATCACCTGTCAGAAACCTGGGCAAATCACTGTTTCACTCCATaGGAAGTTTTACATCAGAGC +
Preference number: 4 (lower is better)
Translates to: KRRHSLSSRYHLSETWANHCFTP*EVLHQS
Trigger: GCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTG...ATTTGCCCAGGTTTCTGACAGGTGATACCTGGAAGAGAGACTATGTCTTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR TCA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATACCAGTTCAAAGGTCTaGAACCGTTCTTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNTSSKV*NRSLLW
Trigger: CCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGT...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTTCCCACTATTCTTCCTaGTGGCTTTACCACAAAGGA +
Preference number: 4 (lower is better)
Translates to: LFCQTIPVQRSETVLCFGSHYSS*WLYHKG
Trigger: TCCTTTGTGGTAAAGCCATCAGGAAGAATAGTGGGA...ACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATTCAAAACTCATCAAATaGGTCTGGGTATGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNSKLIK*VWVWWL
Trigger: GAGCCACCATACCCAGACTCATTTGATGAGTTTTGA...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp TCTAGAGCTGGTTTAAATTCAAGTGAAGCCATTAATTTTCTTACCAGTCTGGACAATCCTAACAGTAGCTaGCTGCCAGGGGAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SRAGLNSSEAINFLTSLDNPNSS*LPGEGR
Trigger: TCTTCCCTCCCCTGGCAGTCAGCTACTGTTAGGATT...GTCCAGACTGGTAAGAAAATTAATGGCTTCACTTGAATTTAAACCAGCTCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGTTCCATTCTCACCGTTaGGGATTCTGCAGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVFHSHR*GFCSLK
Trigger: TTTCAGACTGCAGAATCCGCAACGGTGAGAATGGAA...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGATTCTCTAAGGCTTTCTaGACATCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: ISLAVAANKLELYIPSPRFSKAF*TSCSDS
Trigger: GGAGTCAGAGCAGGATGTGCAGAAAGCCTTAGAGAA...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CAGCAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGCTGGCCCATGTACATaGGGTGCTTCTCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QQNLKLFCQTIPVQRSETAGPCT*GASLRL
Trigger: AAGCCTTAGAGAAGCACCGCATGTACATGGGCCAGC...GGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR GCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCGGCGAAGATTTGACCTaGAAGCTCTTCATTAAGGCA +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCGEDLT*KLFIKA
Trigger: TGCCTTAATGAAGAGCTTGCAGGTCAAATCTTCGCC...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTCATGGGTCTCAAAGTaGACATCAGCTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMSWVSK*TSASPV
Trigger: CACTGGAGAAGCTGATGTGCACTTTGAGACCCATGA...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGATCATGGGTCTCAAAGTaGACATCAGCTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ISLAVAANKLELYIPSPRSWVSK*TSASPV
Trigger: CACTGGAGAAGCTGATGTGCACTTTGAGACCCATGA...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp AAGCCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTATCCTTGAGCATCGCTaGAACAGCATCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: KPLIFLPVWTVLTCHFTVILEHR*NSILMG
Trigger: ACCCATGAGGATGCTGTTGCAGCGATGCTCAAGGAT...AACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CCA 90 bp AAGCCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTTTCATACTCAGGGGGTaGTGGAAGGTCTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: KPLIFLPVWTVLTCHFTVFILRG*WKVFQV
Trigger: TACCTGGAAGACCTTCCACCACCCCCTGAGTATGAA...AACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CCA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACACTTCCACATACCGCTaGCCCATGTACATGCGGTGC +
Preference number: 4 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHTSTYR*PMYMRC
Trigger: GCACCGCATGTACATGGGCCAGCGGTATGTGGAAGT...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp GTGCTTCTCTTCCTTTCCCATAACTACATCCACCTTAGCAATCACTTACGTACTTCAACAGGGCTTGGTTaGCCATTTCTGGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VLLFLSHNYIHLSNHLRTSTGLG*PFLVLQ
Trigger: TTGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGA...AGTACGTAAGTGATTGCTAAGGTGGATGTAGTTATGGGAAAGGAAGAGAAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCTCAACAGGGCTTGGTTaGCCATTTCTGGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCSTGLG*PFLVLQ
Trigger: TTGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGA...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTTCAACAGGGCTTGGTTaGCCATTTCTGGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LFCQTIPVQRSETVLCFGSTGLG*PFLVLQ
Trigger: TTGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGA...ACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGCTCTGGAAGCTTTTCTaGCACCTCCTTAGGCAATTC +
Preference number: 4 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALLWKLF*HLLRQF
Trigger: GAATTGCCTAAGGAGGTGCCAGAAAAGCTTCCAGAG...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTTCTTGGGCATTGGCTTaGAAAGGTAATCCTCTCATG +
Preference number: 4 (lower is better)
Translates to: LFCQTIPVQRSETVLCFGSWALA*KGNPLM
Trigger: CATGAGAGGATTACCTTTCCAAGCCAATGCCCAAGA...ACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGTCTTGGGCATTGGCTTaGAAAGGTAATCCTCTCATG +
Preference number: 4 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVSWALA*KGNPLM
Trigger: CATGAGAGGATTACCTTTCCAAGCCAATGCCCAAGA...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCATCAGCTTCTCCAGTaGCCTTCCCACTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QNLKLFCQTIPVQRSETVHQLLQ*PSHWSC
Trigger: ACAGCTCCAGTGGGAAGGCCACTGGAGAAGCTGATG...AACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAGCAACAGCATCCTCATaGGTCTCAAAGTGCACATCA +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCAATASS*VSKCTS
Trigger: TGATGTGCACTTTGAGACCCATGAGGATGCTGTTGC...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGGCAACAGCATCCTCATaGGTCTCAAAGTGCACATCA +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMATASS*VSKCTS
Trigger: TGATGTGCACTTTGAGACCCATGAGGATGCTGTTGC...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAGCAACAGCATCCTCATaGGTCTCAAAGTGCACATCA +
Preference number: 4 (lower is better)
Translates to: ISLAVAANKLELYIPSPRATASS*VSKCTS
Trigger: TGATGTGCACTTTGAGACCCATGAGGATGCTGTTGC...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CCATATATGAAAACGCATTTCCATCTAGGCAGTACTACTGATGATGTTAAGCTGACTATAACTCCAGCCTaGGTGACAGAGCGACTGTCT +
Preference number: 4 (lower is better)
Translates to: PYMKTHFHLGSTTDDVKLTITPA*VTERLS
Trigger: AGACAGTCGCTCTGTCACCCAGGCTGGAGTTATAGT...CAGCTTAACATCATCAGTAGTACTGCCTAGATGGAAATGCGTTTTCATATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCACTCCTTCTGTATGAGTaGAGTTGCAGAGGTGACCTT +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCALLLYE*SCRGDL
Trigger: AAGGTCACCTCTGCAACTCCACTCATACAGAAGGAG...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502323.5
CDS-3UTR TCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGGTCCTTGAGCTCGAATaGGAAAGACATCATCCACTT +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMVLELE*ERHHPL
Trigger: AAGTGGATGATGTCTTTCTCATTCGAGCTCAAGGAC...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp TCCAGCAACCTGGTTCCTTGGTATTTACCCAAAGGAGCTGAAAACGAGTCTACAAAAGCTGTCATGGGTTaGATATCCTCATTTACTTCA +
Preference number: 4 (lower is better)
Translates to: SSNLVPWYLPKGAENESTKAVMG*ISSFTS
Trigger: TGAAGTAAATGAGGATATTCAACCCATGACAGCTTT...TGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACCAAGGAACCAGGTTGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGACCAGTTCAAAGGTCTaGAACCGTTCTTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMTSSKV*NRSLLW
Trigger: CCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGT...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAACCAGTTCAAAGGTCTaGAACCGTTCTTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCATSSKV*NRSLLW
Trigger: CCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGT...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGCAGTCTGGACTGTTCTaGCATGTCACTTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALQSGLF*HVTSQF
Trigger: AAACTGTGAAGTGACATGTCAGAACAGTCCAGACTG...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR TCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCACAGTCTGGACTGTTCTaGCATGTCACTTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCAQSGLF*HVTSQF
Trigger: AAACTGTGAAGTGACATGTCAGAACAGTCCAGACTG...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR TCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAGTACTGCCACATTGTaGCAGAAGTACAGCTTTATC +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCSTATL*QKYSFI
Trigger: GATAAAGCTGTACTTCTGTCACAATGTGGCAGTACT...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR TCA 90 bp CTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTAGTACTGCCACATTGTaGCAGAAGTACAGCTTTATC +
Preference number: 4 (lower is better)
Translates to: LFCQTIPVQRSETVLCFGSTATL*QKYSFI
Trigger: GATAAAGCTGTACTTCTGTCACAATGTGGCAGTACT...ACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR TCA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAAGCATACAGGATTTTaGTTCTCCTACACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVKHTGF*FSYTGA
Trigger: TGCACCTGTGTAGGAGAATCAAAATCCTGTATGCTT...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR GCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTTCCATTCTCACCGTTaGGGATTCTGCAGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMFHSHR*GFCSLK
Trigger: TTTCAGACTGCAGAATCCGCAACGGTGAGAATGGAA...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGGCTTTCTGCACATCCTaGTCTGACTCCATTTCAATT +
Preference number: 4 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVAFCTS*SDSISI
Trigger: AATTGAAATGGAGTCAGAGCAGGATGTGCAGAAAGC...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAGGCGAAGATTTGACCTaGAAGCTCTTCATTAAGGCA +
Preference number: 4 (lower is better)
Translates to: ISLAVAANKLELYIPSPRGEDLT*KLFIKA
Trigger: TGCCTTAATGAAGAGCTTGCAGGTCAAATCTTCGCC...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGGGCGAAGATTTGACCTaGAAGCTCTTCATTAAGGCA +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMGEDLT*KLFIKA
Trigger: TGCCTTAATGAAGAGCTTGCAGGTCAAATCTTCGCC...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATCTCATGTGGACAAAATaGAGAGAAGACGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNLMWTK*REDVVP
Trigger: TGGAACTACGTCTTCTCTGCATTTTGTCCACATGAG...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAATCCTTGAGCATCGCTaGAACAGCATCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLEILEHR*NSILMG
Trigger: ACCCATGAGGATGCTGTTGCAGCGATGCTCAAGGAT...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CAGCAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCATCCTTGAGCATCGCTaGAACAGCATCCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: QQNLKLFCQTIPVQRSETILEHR*NSILMG
Trigger: ACCCATGAGGATGCTGTTGCAGCGATGCTCAAGGAT...GGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR GCA 90 bp GGTATTTACCCAAAGGAGCTGAAAACGAGTCTACACAAAAACCTGCACATAAATTTCAGCCTCACAAAGTaGGGGGATTACAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: GIYPKELKTSLHKNLHINFSLTK*GDYRCQ
Trigger: CTGACATCTGTAATCCCCGCACTTTGTGAGGCTGAA...ATTTATGTGCAGGTTTTTGTGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAATACTCAGGGGGTGGTaGAAGGTCTTCCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLEILRGW*KVFQVS
Trigger: ACTTACCTGGAAGACCTTCCACCACCCCCTGAGTAT...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGATACTCAGGGGGTGGTaGAAGGTCTTCCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: QLTQNTKIISLAVAANKLILRGW*KVFQVS
Trigger: ACTTACCTGGAAGACCTTCCACCACCCCCTGAGTAT...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAATTCATACTCAGGGGGTaGTGGAAGGTCTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLEFILRG*WKVFQV
Trigger: TACCTGGAAGACCTTCCACCACCCCCTGAGTATGAA...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCACTTCCTCTTCTAACTTaGACGGGGCCAATTCATACT +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCALPLLT*TGPIHT
Trigger: AGTATGAATTGGCCCCGTCCAAGTTAGAAGAGGAAG...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGCTTCCTCTTCTAACTTaGACGGGGCCAATTCATACT +
Preference number: 4 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALLPLLT*TGPIHT
Trigger: AGTATGAATTGGCCCCGTCCAAGTTAGAAGAGGAAG...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGTCAACAGGGCTTGGTTaGCCATTTCTGGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALSTGLG*PFLVLQ
Trigger: TTGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGA...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCATCAACAGGGCTTGGTTaGCCATTTCTGGTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCASTGLG*PFLVLQ
Trigger: TTGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGA...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTTGTTTCAACAGGGCTTaGTTGGCCATTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KQKVLPHCDRSTALSINPCFNRA*LAISGS
Trigger: AGAACCAGAAATGGCCAACCAAGCCCTGTTGAAACA...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGTTTCAACAGGGCTTaGTTGGCCATTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMCFNRA*LAISGS
Trigger: AGAACCAGAAATGGCCAACCAAGCCCTGTTGAAACA...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TCTACTGCTGACATACATACCATTCTCCTCTATACTATAGGTCCTACCAATTCAAAAATCAGCAGCCTCTaGAAGCTTTTCTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: STADIHTILLYTIGPTNSKISSL*KLFWHL
Trigger: GAGGTGCCAGAAAAGCTTCCAGAGGCTGCTGATTTT...TGAATTGGTAGGACCTATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp CCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTTTGGCAACAGCATCCTCATaGGTCTCAAAGTGCACATCA +
Preference number: 4 (lower is better)
Translates to: PLIFLPVWTVLTCHFTVLATASS*VSKCTS
Trigger: TGATGTGCACTTTGAGACCCATGAGGATGCTGTTGC...CAAAACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CCA 90 bp AATTTGGATTGGAACTCTACTGCTGACATACATACCATTCTCCTCTATACTATACTCTGTCACTCAGGCTaGAGTGCAGCAACAGTCATG +
Preference number: 4 (lower is better)
Translates to: NLDWNSTADIHTILLYTILCHSG*SAATVM
Trigger: CATGACTGTTGCTGCACTCCAGCCTGAGTGACAGAG...TATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGAGTTCCAATCCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp TCTACTGCTGACATACATACCATTCTCCTCTATACTATAGGTCCTACCAATTCAGCAGGAGGCAGGCTATaGGATAAAGCATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: STADIHTILLYTIGPTNSAGGRL*DKAWQN
Trigger: ATTTTGCCATGCTTTATCCCATAGCCTGCCTCCTGC...TGAATTGGTAGGACCTATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAACCACAGGCGAAGATTTaGCCTGCAAGCTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKPQAKI*PASSSL
Trigger: TAATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGG...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGCCACAGGCGAAGATTTaGCCTGCAAGCTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: QLTQNTKIISLAVAANKLPQAKI*PASSSL
Trigger: TAATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGG...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGACACTGTTTCACTCCATaGGAAGTTTTACATCAGAGC +
Preference number: 4 (lower is better)
Translates to: ISLAVAANKLELYIPSPRHCFTP*EVLHQS
Trigger: GCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTG...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTTTGCAGTCTGGACTGTTCTaGCATGTCACTTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: PLIFLPVWTVLTCHFTVLQSGLF*HVTSQF
Trigger: AAACTGTGAAGTGACATGTCAGAACAGTCCAGACTG...CAAAACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR TCA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGAGTACTGCCACATTGTaGCAGAAGTACAGCTTTATC +
Preference number: 4 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALSTATL*QKYSFI
Trigger: GATAAAGCTGTACTTCTGTCACAATGTGGCAGTACT...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR TCA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGAAGCATACAGGATTTTaGTTCTCCTACACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALKHTGF*FSYTGA
Trigger: TGCACCTGTGTAGGAGAATCAAAATCCTGTATGCTT...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR TCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTTGACTACAGTACAGTaGTTTCGCATCTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMLTTVQ*FRILAG
Trigger: ACCAGCTAAGATGCGAAATCACTGTACTGTAGTCAA...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR GCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGGCTTTCTGCACATCCTaGTCTGACTCCATTTCAATT +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMAFCTS*SDSISI
Trigger: AATTGAAATGGAGTCAGAGCAGGATGTGCAGAAAGC...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTGCTTTCTGCACATCCTaGTCTGACTCCATTTCAATT +
Preference number: 4 (lower is better)
Translates to: KQKVLPHCDRSTALSINPAFCTS*SDSISI
Trigger: AATTGAAATGGAGTCAGAGCAGGATGTGCAGAAAGC...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR GCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAGCTTTCTGCACATCCTaGTCTGACTCCATTTCAATT +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCAAFCTS*SDSISI
Trigger: AATTGAAATGGAGTCAGAGCAGGATGTGCAGAAAGC...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CAGATACCAGTTCTCATAGCTTGGCATATTCAACCATATATGAAAACGCATTTCTTCTCTAAGGCTTTCTaGACATCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: QIPVLIAWHIQPYMKTHFFSKAF*TSCSDS
Trigger: GGAGTCAGAGCAGGATGTGCAGAAAGCCTTAGAGAA...GAAATGCGTTTTCATATATGGTTGAATATGCCAAGCTATGAGAACTGGTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAATTCTCTAAGGCTTTCTaGACATCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLEFSKAF*TSCSDS
Trigger: GGAGTCAGAGCAGGATGTGCAGAAAGCCTTAGAGAA...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGCTCATGTGGACAAAATaGAGAGAAGACGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMLMWTK*REDVVP
Trigger: TGGAACTACGTCTTCTCTGCATTTTGTCCACATGAG...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGTCATGGGTCTCAAAGTaGACATCAGCTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QLTQNTKIISLAVAANKLSWVSK*TSASPV
Trigger: CACTGGAGAAGCTGATGTGCACTTTGAGACCCATGA...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAATCATGGGTCTCAAAGTaGACATCAGCTTCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKSWVSK*TSASPV
Trigger: CACTGGAGAAGCTGATGTGCACTTTGAGACCCATGA...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp AATTTGGATTGGAACTCTACTGCTGACATACATACCATTCTCCTCTATACTATAAGCACCCTGACCATATaGCCCACTCCCACTATTCTT +
Preference number: 4 (lower is better)
Translates to: NLDWNSTADIHTILLYTISTLTI*PTPTIL
Trigger: AAGAATAGTGGGAGTGGGGCATATGGTCAGGGTGCT...TATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGAGTTCCAATCCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGGGATTACAGGCGTGTaGCACACCTGGCTAATTTTT +
Preference number: 4 (lower is better)
Translates to: QLTQNTKIISLAVAANKLGITGV*HTWLIF
Trigger: AAAAATTAGCCAGGTGTGGCACACGCCTGTAATCCC...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp AATTTGGATTGGAACTCTACTGCTGACATACATACCATTCTCCTCTATACTATATTCAAGCGATTCTCCTaGCTTGGCCTCCCAAGTAAC +
Preference number: 4 (lower is better)
Translates to: NLDWNSTADIHTILLYTIFKRFS*LGLPSN
Trigger: GTTACTTGGGAGGCCAAGGCAGGAGAATCGCTTGAA...TATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGAGTTCCAATCCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CAGATACCAGTTCTCATAGCTTGGCATATTCAACCATATATGAAAACGCATTTCCTGAGGCATGAGAATTaGTTGAAACTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QIPVLIAWHIQPYMKTHFLRHEN*LKLGGG
Trigger: TCCACCTCCCAGTTTCAAGCAATTCTCATGCCTCAG...GAAATGCGTTTTCATATATGGTTGAATATGCCAAGCTATGAGAACTGGTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp AAGCCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTCTTCCTCTTCTAACTTaGACGGGGCCAATTCATACT +
Preference number: 4 (lower is better)
Translates to: KPLIFLPVWTVLTCHFTVLPLLT*TGPIHT
Trigger: AGTATGAATTGGCCCCGTCCAAGTTAGAAGAGGAAG...AACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CCA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAACTCTGGAAGCTTTTCTaGCACCTCCTTAGGCAATTC +
Preference number: 4 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKLWKLF*HLLRQF
Trigger: GAATTGCCTAAGGAGGTGCCAGAAAAGCTTCCAGAG...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGCTCTGGAAGCTTTTCTaGCACCTCCTTAGGCAATTC +
Preference number: 4 (lower is better)
Translates to: QLTQNTKIISLAVAANKLLWKLF*HLLRQF
Trigger: GAATTGCCTAAGGAGGTGCCAGAAAAGCTTCCAGAG...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TCTAGAGCTGGTTTAAATTCAAGTGAAGCCATTAATTTTCTTACCAGTCTGGACCTCTGGAAGCTTTTCTaGCACCTCCTTAGGCAATTC +
Preference number: 4 (lower is better)
Translates to: SRAGLNSSEAINFLTSLDLWKLF*HLLRQF
Trigger: GAATTGCCTAAGGAGGTGCCAGAAAAGCTTCCAGAG...GTCCAGACTGGTAAGAAAATTAATGGCTTCACTTGAATTTAAACCAGCTCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAAAAATCAGCAGCCTCTaGAAGCTTTTCTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLEKISSL*KLFWHL
Trigger: GAGGTGCCAGAAAAGCTTCCAGAGGCTGCTGATTTT...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp AATTTGGATTGGAACTCTACTGCTGACATACATACCATTCTCCTCTATACTATACAGTCTTCTCAAATGTaGGGAGACGGTACCGTCTTC +
Preference number: 4 (lower is better)
Translates to: NLDWNSTADIHTILLYTIQSSQM*GDGTVF
Trigger: GAAGACGGTACCGTCTCCCCACATTTGAGAAGACTG...TATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGAGTTCCAATCCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAATGTTGCCTTCAAACTaGGTTCCTTATGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLEMLPSN*VPYASP
Trigger: GGGGGAAGCATAAGGAACCCAGTTTGAAGGCAACAT...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGCTATGGGATAAAGCATaGCAAAATGCTGCTTGTACA +
Preference number: 4 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVLWDKA*QNAACT
Trigger: TGTACAAGCAGCATTTTGCCATGCTTTATCCCATAG...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAGTCCTTGAGCTCGAATaGGAAAGACATCATCCACTT +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLEVLELE*ERHHPL
Trigger: AAGTGGATGATGTCTTTCTCATTCGAGCTCAAGGAC...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATAAAGCTGTCATGGGTTaGATATCCTCATTTACTTCA +
Preference number: 4 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNKAVMG*ISSFTS
Trigger: TGAAGTAAATGAGGATATTCAACCCATGACAGCTTT...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAAACCAGTTCAAAGGTCTaGAACCGTTCTTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKTSSKV*NRSLLW
Trigger: CCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGT...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTCCTACCAATTCAATGTaGGTGTCTTCCGATAATTTA +
Preference number: 4 (lower is better)
Translates to: LFCQTIPVQRSETVLCFGPTNSM*VSSDNL
Trigger: TAAATTATCGGAAGACACTCACATTGAATTGGTAGG...ACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGTTCCATTCTCACCGTTaGGGATTCTGCAGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: QLTQNTKIISLAVAANKLFHSHR*GFCSLK
Trigger: TTTCAGACTGCAGAATCCGCAACGGTGAGAATGGAA...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACTTCTCTAAGGCTTTCTaGACATCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHFSKAF*TSCSDS
Trigger: GGAGTCAGAGCAGGATGTGCAGAAAGCCTTAGAGAA...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTTTCTCTAAGGCTTTCTaGACATCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: QNLKLFCQTIPVQRSETVFSKAF*TSCSDS
Trigger: GGAGTCAGAGCAGGATGTGCAGAAAGCCTTAGAGAA...AACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR GCA 90 bp TGTCAATGGGAATTCAAAATAGTCATGTTGGAACAGTTTGGCAGTTTCTTCCAAGGCGAAGATTTGACCTaGAAGCTCTTCATTAAGGCA +
Preference number: 4 (lower is better)
Translates to: CQWEFKIVMLEQFGSFFQGEDLT*KLFIKA
Trigger: TGCCTTAATGAAGAGCTTGCAGGTCAAATCTTCGCC...TTGGAAGAAACTGCCAAACTGTTCCAACATGACTATTTTGAATTCCCATTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAGGCGAAGATTTGACCTaGAAGCTCTTCATTAAGGCA +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLEGEDLT*KLFIKA
Trigger: TGCCTTAATGAAGAGCTTGCAGGTCAAATCTTCGCC...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp GGTATTTACCCAAAGGAGCTGAAAACGAGTCTACACAAAAACCTGCACATAAATCTCATGTGGACAAAATaGAGAGAAGACGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: GIYPKELKTSLHKNLHINLMWTK*REDVVP
Trigger: TGGAACTACGTCTTCTCTGCATTTTGTCCACATGAG...ATTTATGTGCAGGTTTTTGTGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGCACATACTCTATTTCTaGTTCATTGCCTGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALHILYF*FIAWCQ
Trigger: TTGACACCAGGCAATGAAGCAGAAATAGAGTATGTG...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTTCCTCTTCTAACTTaGACGGGGCCAATTCATACT +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLELPLLT*TGPIHT
Trigger: AGTATGAATTGGCCCCGTCCAAGTTAGAAGAGGAAG...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGCTTCCTCTTCTAACTTaGACGGGGCCAATTCATACT +
Preference number: 4 (lower is better)
Translates to: QLTQNTKIISLAVAANKLLPLLT*TGPIHT
Trigger: AGTATGAATTGGCCCCGTCCAAGTTAGAAGAGGAAG...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCTTGGTTGGCCATTTCTaGTTCTTCAAATTGCACATA +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCLVGHF*FFKLHI
Trigger: TATGTGCAATTTGAAGAACCAGAAATGGCCAACCAA...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAATGTTTCAACAGGGCTTaGTTGGCCATTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLECFNRA*LAISGS
Trigger: AGAACCAGAAATGGCCAACCAAGCCCTGTTGAAACA...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAGCAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCTGTTTCAACAGGGCTTaGTTGGCCATTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: QQNLKLFCQTIPVQRSETCFNRA*LAISGS
Trigger: AGAACCAGAAATGGCCAACCAAGCCCTGTTGAAACA...GGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGTTCATTCCTTCTGCTTaGAAATATCTCGATGTATCG +
Preference number: 4 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVFIPSA*KYLDVS
Trigger: CGATACATCGAGATATTTCCAAGCAGAAGGAATGAA...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTAAAATCAGCAGCCTCTaGAAGCTTTTCTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: QNLKLFCQTIPVQRSETVKISSL*KLFWHL
Trigger: GAGGTGCCAGAAAAGCTTCCAGAGGCTGCTGATTTT...AACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAATCTTGGGCATTGGCTTaGAAAGGTAATCCTCTCATG +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLESWALA*KGNPLM
Trigger: CATGAGAGGATTACCTTTCCAAGCCAATGCCCAAGA...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGTCTTGGGCATTGGCTTaGAAAGGTAATCCTCTCATG +
Preference number: 4 (lower is better)
Translates to: QLTQNTKIISLAVAANKLSWALA*KGNPLM
Trigger: CATGAGAGGATTACCTTTCCAAGCCAATGCCCAAGA...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATAAGTTTATAATGTCTTaGGCATTGGCTTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNKFIMS*ALAWKG
Trigger: ACCTTTCCAAGCCAATGCCCAAGACATTATAAACTT...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAAGTTTATAATGTCTTaGGCATTGGCTTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCKFIMS*ALAWKG
Trigger: ACCTTTCCAAGCCAATGCCCAAGACATTATAAACTT...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATTTCTGCTTCATTGCCTaGTGTCAATATTTAGATGAG +
Preference number: 4 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNFCFIA*CQYLDE
Trigger: CTCATCTAAATATTGACACCAGGCAATGAAGCAGAA...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp CAGATACCAGTTCTCATAGCTTGGCATATTCAACCATATATGAAAACGCATTTCGGCGTGTGCCACACCTaGCTAATTTTTGCATTTTCA +
Preference number: 4 (lower is better)
Translates to: QIPVLIAWHIQPYMKTHFGVCHT*LIFAFS
Trigger: TGAAAATGCAAAAATTAGCCAGGTGTGGCACACGCC...GAAATGCGTTTTCATATATGGTTGAATATGCCAAGCTATGAGAACTGGTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp CAGATACCAGTTCTCATAGCTTGGCATATTCAACCATATATGAAAACGCATTTCTGCGATAGCGCAATTTaGATTGGAACTCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: QIPVLIAWHIQPYMKTHFCDSAI*IGTLLL
Trigger: CAGCAGTAGAGTTCCAATCCAAATTGCGCTATCGCA...GAAATGCGTTTTCATATATGGTTGAATATGCCAAGCTATGAGAACTGGTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp CAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTGTCCTTGAGCTCGAATaGGAAAGACATCATCCACTT +
Preference number: 4 (lower is better)
Translates to: QNLKLFCQTIPVQRSETVVLELE*ERHHPL
Trigger: AAGTGGATGATGTCTTTCTCATTCGAGCTCAAGGAC...AACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGAAAGCTGTCATGGGTTaGATATCCTCATTTACTTCA +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMKAVMG*ISSFTS
Trigger: TGAAGTAAATGAGGATATTCAACCCATGACAGCTTT...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAAAAGCTGTCATGGGTTaGATATCCTCATTTACTTCA +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCAKAVMG*ISSFTS
Trigger: TGAAGTAAATGAGGATATTCAACCCATGACAGCTTT...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTACCAGTTCAAAGGTCTaGAACCGTTCTTTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QNLKLFCQTIPVQRSETVTSSKV*NRSLLW
Trigger: CCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGT...AACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR TCA 90 bp TCTAGAGCTGGTTTAAATTCAAGTGAAGCCATTAATTTTCTTACCAGTCTGGACTTGACTACAGTACAGTaGTTTCGCATCTTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SRAGLNSSEAINFLTSLDLTTVQ*FRILAG
Trigger: ACCAGCTAAGATGCGAAATCACTGTACTGTAGTCAA...GTCCAGACTGGTAAGAAAATTAATGGCTTCACTTGAATTTAAACCAGCTCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR GCA 90 bp CAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTTTCCATTCTCACCGTTaGGGATTCTGCAGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: QNLKLFCQTIPVQRSETVFHSHR*GFCSLK
Trigger: TTTCAGACTGCAGAATCCGCAACGGTGAGAATGGAA...AACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR GCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAGCTTTCTGCACATCCTaGTCTGACTCCATTTCAATT +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLEAFCTS*SDSISI
Trigger: AATTGAAATGGAGTCAGAGCAGGATGTGCAGAAAGC...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGCAATGTCTTTCTCATTaGAACTATAAGGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMQCLSH*NYKEVL
Trigger: GAGGACTTCCTTATAGTTGCAATGAGAAAGACATTG...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGACAATGTCTTTCTCATTaGAACTATAAGGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: ISLAVAANKLELYIPSPRQCLSH*NYKEVL
Trigger: GAGGACTTCCTTATAGTTGCAATGAGAAAGACATTG...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCACAATGTCTTTCTCATTaGAACTATAAGGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCAQCLSH*NYKEVL
Trigger: GAGGACTTCCTTATAGTTGCAATGAGAAAGACATTG...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGCAATGTCTTTCTCATTaGAACTATAAGGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALQCLSH*NYKEVL
Trigger: GAGGACTTCCTTATAGTTGCAATGAGAAAGACATTG...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR GCA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAACTATATTCAGTCCTaGAAAGAAGTCTACAATGTC +
Preference number: 4 (lower is better)
Translates to: AVAANKLELYIPSPRKMCNYIQS*KEVYNV
Trigger: GACATTGTAGACTTCTTTGCAGGACTGAATATAGTT...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTAACTATATTCAGTCCTaGAAAGAAGTCTACAATGTC +
Preference number: 4 (lower is better)
Translates to: LFCQTIPVQRSETVLCFGNYIQS*KEVYNV
Trigger: GACATTGTAGACTTCTTTGCAGGACTGAATATAGTT...ACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CAGCAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCCTCATGTGGACAAAATaGAGAGAAGACGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: QQNLKLFCQTIPVQRSETLMWTK*REDVVP
Trigger: TGGAACTACGTCTTCTCTGCATTTTGTCCACATGAG...GGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR GCA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGATCTGAAACCGTTCTTTaGTTTGGTGAATGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: ISLAVAANKLELYIPSPRSETVL*FGECLV
Trigger: AACCAAACATTCACCAAAGCAAAGAACGGTTTCAGA...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCATCTGAAACCGTTCTTTaGTTTGGTGAATGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCASETVL*FGECLV
Trigger: AACCAAACATTCACCAAAGCAAAGAACGGTTTCAGA...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CAGCAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCACTCAGCCTGTAGCGTaGCAAGAAGATATATCCTTT +
Preference number: 4 (lower is better)
Translates to: QQNLKLFCQTIPVQRSETTQPVA*QEDISF
Trigger: AAAGGATATATCTTCTTGGCACGCTACAGGCTGAGT...GGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp TGTCAATGGGAATTCAAAATAGTCATGTTGGAACAGTTTGGCAGTTTCTTCCAAAAACTGGGTTCCTTATaGTTCCCCCTTCAAGTAACA +
Preference number: 4 (lower is better)
Translates to: CQWEFKIVMLEQFGSFFQKLGSL*FPLQVT
Trigger: TGTTACTTGAAGGGGGAAGCATAAGGAACCCAGTTT...TTGGAAGAAACTGCCAAACTGTTCCAACATGACTATTTTGAATTCCCATTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTTTGGTTGGCCATTTCTaGTTCTTCAAATTGCACATA +
Preference number: 4 (lower is better)
Translates to: KQKVLPHCDRSTALSINPLVGHF*FFKLHI
Trigger: TATGTGCAATTTGAAGAACCAGAAATGGCCAACCAA...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CCA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTTTCATTCCTTCTGCTTaGAAATATCTCGATGTATCG +
Preference number: 4 (lower is better)
Translates to: KQKVLPHCDRSTALSINPFIPSA*KYLDVS
Trigger: CGATACATCGAGATATTTCCAAGCAGAAGGAATGAA...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTTCATTCCTTCTGCTTaGAAATATCTCGATGTATCG +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMFIPSA*KYLDVS
Trigger: CGATACATCGAGATATTTCCAAGCAGAAGGAATGAA...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGATTCATTCCTTCTGCTTaGAAATATCTCGATGTATCG +
Preference number: 4 (lower is better)
Translates to: ISLAVAANKLELYIPSPRFIPSA*KYLDVS
Trigger: CGATACATCGAGATATTTCCAAGCAGAAGGAATGAA...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTTTCAAAGACCATTTCTaGCTCAGTTATATACTTAGC +
Preference number: 4 (lower is better)
Translates to: LFCQTIPVQRSETVLCFGFKDHF*LSYILS
Trigger: GCTAAGTATATAACTGAGCCAGAAATGGTCTTTGAA...ACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACTCTTGGGCATTGGCTTaGAAAGGTAATCCTCTCATG +
Preference number: 4 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHSWALA*KGNPLM
Trigger: CATGAGAGGATTACCTTTCCAAGCCAATGCCCAAGA...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGCCAGTTCTCATAGCTTaGCATATTCAACCATATATG +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMPVLIA*HIQPYM
Trigger: CATATATGGTTGAATATGCCAAGCTATGAGAACTGG...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTCTAAGGGATGGGTATTaGCATCACCAAGATTTTATA +
Preference number: 4 (lower is better)
Translates to: KQKVLPHCDRSTALSINPLRDGY*HHQDFI
Trigger: TATAAAATCTTGGTGATGCCAATACCCATCCCTTAG...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAAAAAATTAGTCAGGCGTaGTGGTGCACATCTGTAATC +
Preference number: 4 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKKISQA*WCTSVI
Trigger: GATTACAGATGTGCACCACCACGCCTGACTAATTTT...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
39% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CCATATATGAAAACGCATTTCCATCTAGGCAGTACTACTGATGATGTTAAGCTGCAATGTCTTTCTCATTaGAACTATAAGGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PYMKTHFHLGSTTDDVKLQCLSH*NYKEVL
Trigger: GAGGACTTCCTTATAGTTGCAATGAGAAAGACATTG...CAGCTTAACATCATCAGTAGTACTGCCTAGATGGAAATGCGTTTTCATATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTTTGCAATGTCTTTCTCATTaGAACTATAAGGAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PLIFLPVWTVLTCHFTVLQCLSH*NYKEVL
Trigger: GAGGACTTCCTTATAGTTGCAATGAGAAAGACATTG...CAAAACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR GCA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACCTCATGTGGACAAAATaGAGAGAAGACGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHLMWTK*REDVVP
Trigger: TGGAACTACGTCTTCTCTGCATTTTGTCCACATGAG...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp CCATATATGAAAACGCATTTCCATCTAGGCAGTACTACTGATGATGTTAAGCTGGTACCGTCTTCCACTTaGATGGAAATAAGATTACTT +
Preference number: 4 (lower is better)
Translates to: PYMKTHFHLGSTTDDVKLVPSST*MEIRLL
Trigger: AAGTAATCTTATTTCCATGCAAGTGGAAGACGGTAC...CAGCTTAACATCATCAGTAGTACTGCCTAGATGGAAATGCGTTTTCATATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CAGATACCAGTTCTCATAGCTTGGCATATTCAACCATATATGAAAACGCATTTCCTGGTATTTACATACTaGTTCTCAGAGTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: QIPVLIAWHIQPYMKTHFLVFTY*FSEFSL
Trigger: AAGGGAGAACTCTGAGAAGCAGTATGTAAATACCAG...GAAATGCGTTTTCATATATGGTTGAATATGCCAAGCTATGAGAACTGGTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCACCTGGCTAATTTTTaGATTTTCAGTAGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: QNLKLFCQTIPVQRSETVHLANF*IFSRAG
Trigger: TCCGGCTCTACTGAAAATGCAAAAATTAGCCAGGTG...AACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp AAGCCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTTCATACATAGAACACTaGTCAGCCATAAAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: KPLIFLPVWTVLTCHFTVSYIEH*SAIKRN
Trigger: GTTCCTTTTTATGGCTGAGCAGTGTTCTATGTATGA...AACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp TGCTTCTTGCTTCACCCTTATTATCTGGAGCCCCTAGAGTCTTATTTTCCTTTTTTCAAAGACCATTTCTaGCTCAGTTATATACTTAGC +
Preference number: 4 (lower is better)
Translates to: CFLLHPYYLEPLESYFPFFKDHF*LSYILS
Trigger: GCTAAGTATATAACTGAGCCAGAAATGGTCTTTGAA...AAAAGGAAAATAAGACTCTAGGGGCTCCAGATAATAAGGGTGAAGCAAGAAGCA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000506453.1
CDS-3UTR CCA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCATTCAAAGACCATTTCTaGCTCAGTTATATACTTAGC +
Preference number: 4 (lower is better)
Translates to: QLLLINWNCISQVQERCAFKDHF*LSYILS
Trigger: GCTAAGTATATAACTGAGCCAGAAATGGTCTTTGAA...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTTCAAAGACCATTTCTaGCTCAGTTATATACTTAGC +
Preference number: 4 (lower is better)
Translates to: LAVAANKLELYIPSPRKMFKDHF*LSYILS
Trigger: GCTAAGTATATAACTGAGCCAGAAATGGTCTTTGAA...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCAGCAATCAGCTCCCTaGTATTTACATACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QNLKLFCQTIPVQRSETVQQSAP*YLHTAS
Trigger: AGAAGCAGTATGTAAATACCAGGGAGCTGATTGCTG...AACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp AAGCCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTTTTAGGGTGTTTAGGTaGGAGAAAAGCCAAAATACA +
Preference number: 4 (lower is better)
Translates to: KPLIFLPVWTVLTCHFTVFRVFR*EKSQNT
Trigger: TGTATTTTGGCTTTTCTCCCACCTAAACACCCTAAA...AACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAAGAGGGTTTTAAATTCTaGAACAAACAGGATGTAACC +
Preference number: 4 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKEGFKF*NKQDVT
Trigger: GGTTACATCCTGTTTGTTTCAGAATTTAAAACCCTC...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAACACCTAGCCTATTCTTaGTTTTCATATAATCAGGCT +
Preference number: 4 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKHLAYS*FSYNQA
Trigger: AGCCTGATTATATGAAAATCAAGAATAGGCTAGGTG...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp TCTAGAGCTGGTTTAAATTCAAGTGAAGCCATTAATTTTCTTACCAGTCTGGACTCTGAAACCGTTCTTTaGTTTGGTGAATGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SRAGLNSSEAINFLTSLDSETVL*FGECLV
Trigger: AACCAAACATTCACCAAAGCAAAGAACGGTTTCAGA...GTCCAGACTGGTAAGAAAATTAATGGCTTCACTTGAATTTAAACCAGCTCTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR GCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAATCTGAAACCGTTCTTTaGTTTGGTGAATGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLESETVL*FGECLV
Trigger: AACCAAACATTCACCAAAGCAAAGAACGGTTTCAGA...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR GCA 90 bp ATGAAATGCTTCTTGCTTCACCCTTATTATCTGGAGCCCCTAGAGTCTTATTTTATATCTCGATGTATCTaGAAAGAAGTCTACAATGTC +
Preference number: 4 (lower is better)
Translates to: MKCFLLHPYYLEPLESYFISRCI*KEVYNV
Trigger: GACATTGTAGACTTCTTTGCAGATACATCGAGATAT...AAAATAAGACTCTAGGGGCTCCAGATAATAAGGGTGAAGCAAGAAGCATTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506453.1
CDS-3UTR CCA 90 bp CAGATACCAGTTCTCATAGCTTGGCATATTCAACCATATATGAAAACGCATTTCTTGGTTGGCCATTTCTaGTTCTTCAAATTGCACATA +
Preference number: 4 (lower is better)
Translates to: QIPVLIAWHIQPYMKTHFLVGHF*FFKLHI
Trigger: TATGTGCAATTTGAAGAACCAGAAATGGCCAACCAA...GAAATGCGTTTTCATATATGGTTGAATATGCCAAGCTATGAGAACTGGTATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAATTGGTTGGCCATTTCTaGTTCTTCAAATTGCACATA +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLELVGHF*FFKLHI
Trigger: TATGTGCAATTTGAAGAACCAGAAATGGCCAACCAA...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp GGTATTTACCCAAAGGAGCTGAAAACGAGTCTACACAAAAACCTGCACATAAATTTCAAAGACCATTTCTaGCTCAGTTATATACTTAGC +
Preference number: 4 (lower is better)
Translates to: GIYPKELKTSLHKNLHINFKDHF*LSYILS
Trigger: GCTAAGTATATAACTGAGCCAGAAATGGTCTTTGAA...ATTTATGTGCAGGTTTTTGTGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAAAGTTTATAATGTCTTaGGCATTGGCTTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LTQNTKIISLAVAANKLEKFIMS*ALAWKG
Trigger: ACCTTTCCAAGCCAATGCCCAAGACATTATAAACTT...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACTCAAGTGACCCACCATaGAGGGTTTTAAATTCTGAA +
Preference number: 4 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHSSDPP*RVLNSE
Trigger: TTCAGAATTTAAAACCCTCCATGGTGGGTCACTTGA...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAACTAGAACTAAAATTCTaGACAGAAAATCCAGACACC +
Preference number: 4 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKLELKF*TENPDT
Trigger: GGTGTCTGGATTTTCTGTCCAGAATTTTAGTTCTAG...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACAAAGCTGTCATGGGTTaGATATCCTCATTTACTTCA +
Preference number: 4 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHKAVMG*ISSFTS
Trigger: TGAAGTAAATGAGGATATTCAACCCATGACAGCTTT...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR TCA 90 bp CAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTAAAGCTGTCATGGGTTaGATATCCTCATTTACTTCA +
Preference number: 4 (lower is better)
Translates to: QNLKLFCQTIPVQRSETVKAVMG*ISSFTS
Trigger: TGAAGTAAATGAGGATATTCAACCCATGACAGCTTT...AACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR TCA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACATCAGATACCAAATGTaGAAGAGCAACAAAGATCAC +
Preference number: 4 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHIRYQM*KSNKDH
Trigger: GTGATCTTTGTTGCTCTTTCACATTTGGTATCTGAT...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR TCA 90 bp AATTTGGATTGGAACTCTACTGCTGACATACATACCATTCTCCTCTATACTATAAGTGAGTCCGTTATATaGAGTTCTAGAATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: NLDWNSTADIHTILLYTISESVI*SSRIGK
Trigger: TTTGCCTATTCTAGAACTTCATATAACGGACTCACT...TATAGTATAGAGGAGAATGGTATGTATGTCAGCAGTAGAGTTCCAATCCAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR GCA 90 bp CAGCAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCAACTATATTCAGTCCTaGAAAGAAGTCTACAATGTC +
Preference number: 4 (lower is better)
Translates to: QQNLKLFCQTIPVQRSETNYIQS*KEVYNV
Trigger: GACATTGTAGACTTCTTTGCAGGACTGAATATAGTT...GGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR GCA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACTCTGAAACCGTTCTTTaGTTTGGTGAATGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHSETVL*FGECLV
Trigger: AACCAAACATTCACCAAAGCAAAGAACGGTTTCAGA...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTTTGGTTGGCCATTTCTaGTTCTTCAAATTGCACATA +
Preference number: 4 (lower is better)
Translates to: QNLKLFCQTIPVQRSETVLVGHF*FFKLHI
Trigger: TATGTGCAATTTGAAGAACCAGAAATGGCCAACCAA...AACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAGCAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCTTCAAAGACCATTTCTaGCTCAGTTATATACTTAGC +
Preference number: 4 (lower is better)
Translates to: QQNLKLFCQTIPVQRSETFKDHF*LSYILS
Trigger: GCTAAGTATATAACTGAGCCAGAAATGGTCTTTGAA...GGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CCA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACAAGTTTATAATGTCTTaGGCATTGGCTTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHKFIMS*ALAWKG
Trigger: ACCTTTCCAAGCCAATGCCCAAGACATTATAAACTT...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CCA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGTTCATTCCTTCTGCTTaGAAATATCTCGATGTATCT +
Preference number: 4 (lower is better)
Translates to: QLTQNTKIISLAVAANKLFIPSA*KYLDVS
Trigger: AGATACATCGAGATATTTCCAAGCAGAAGGAATGAA...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506453.1
3UTR CAA 72 bp ATAGTTCGTACAACTACAGATACCAGTTCTCATAGCTaGGCATATTCAACCATATATGAAAACGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: IVRTTTDTSSHS*AYSTIYENAFP
Trigger: TGGAAATGCGTTTTCATATATGGTTGAATATGCCAAGCTATGAGAACTGGTATCTGTAGTTGTACGAACTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CCA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACCACCTGTCAGAAACCTaGGCAAATTTAATTTTAAGA +
Preference number: 4 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHHLSET*ANLILR
Trigger: TCTTAAAATTAAATTTGCCCAGGTTTCTGACAGGTG...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS CCA 90 bp CGCAGCCCCGGAGCAGCGCCCCGAGTACCCAGCGCGTGCCGGCCATaGACTCCGGAGGCGGCGCAGGGCCTGAAGGCAGCTGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: RSPGAAPRVPSACRP*TPEAAQGLKAAAPA
Trigger: TGCTGGAGCAGCTGCCTTCAGGCCCTGCGCCGCCTCCGGAGTCCATGGCCGGCACGCGCTGGGTACTCGGGGCGCTGCTCCGGGGCTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000505068.5
ENST00000545193.5
CDS GCA 90 bp AGTTACAGCCGCAGCCCCGGAGCAGCGCCCCGAGTACCCAGCGCGTaGCGGCCATGGACTCCGGAGGCGGCGCAGGGCCTGAAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: SYSRSPGAAPRVPSA*RPWTPEAAQGLKAA
Trigger: AGCTGCCTTCAGGCCCTGCGCCGCCTCCGGAGTCCATGGCCGGCACGCGCTGGGTACTCGGGGCGCTGCTCCGGGGCTGCGGCTGTAACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000505068.5
ENST00000545193.5
CDS GCA 90 bp CAGAGTAGGACGCGGCGGAGTAGAAGGGCAGGCAGGCGGCGCCGGTaGGCCGGCAGCTGCTGCAGTTACAGCCGCAGCCCCGGAGCAGCG +
Preference number: 5 (lower is better)
Translates to: QSRTRRSRRAGRRRR*AGSCCSYSRSPGAA
Trigger: CGCTGCTCCGGGGCTGCGGCTGTAACTGCAGCAGCTGCCGGCGCACCGGCGCCGCCTGCCTGCCCTTCTACTCCGCCGCGTCCTACTCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545193.5
CDS GCA 90 bp TTGTTCCAGGGCCCAATAGGAGCACAGGGTGGACGGGGGCGGGTGTaGGGCGAGTGTCGCGGATCCCCGGGCGTGCCCGCGAGGCGCACA +
Preference number: 5 (lower is better)
Translates to: LFQGPIGAQGGRGRV*GECRGSPGVPARRT
Trigger: TGTGCGCCTCGCGGGCACGCCCGGGGATCCGCGACACTCGCCGCACACCCGCCCCCGTCCACCCTGTGCTCCTATTGGGCCCTGGAACAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000499044.6
CDS CCA 90 bp CCTGGGAGAGCTTCCCTTGTTCCAGGGCCCAATAGGAGCACAGGGTaGACGGGGGCGGGTGTGCGGCGAGTGTCGCGGATCCCCGGGCGT +
Preference number: 5 (lower is better)
Translates to: PGRASLVPGPNRSTG*TGAGVRRVSRIPGR
Trigger: ACGCCCGGGGATCCGCGACACTCGCCGCACACCCGCCCCCGTCCACCCTGTGCTCCTATTGGGCCCTGGAACAAGGGAAGCTCTCCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000499044.6
ENST00000508091.1
CDS TCA 90 bp TACCCAGCGCGTGCCGGCCATGGACTCCGGAGGCGGCGCAGGGCCTaGAGGCAGCTGCTCCAGCAGCGATGGTGGAACGGAAGTGGAATC +
Preference number: 5 (lower is better)
Translates to: YPARAGHGLRRRRRA*RQLLQQRWWNGSGI
Trigger: GATTCCACTTCCGTTCCACCATCGCTGCTGGAGCAGCTGCCTTCAGGCCCTGCGCCGCCTCCGGAGTCCATGGCCGGCACGCGCTGGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505068.5
CDS CCA 90 bp GGGACAGCTCGTCTTTCCCTGGGGACAGGAGAGGGAACGGCGCGATaGGGACAGGCTCCTTCCCTACAAGCCAGCCCACGCAACTGTGTG +
Preference number: 5 (lower is better)
Translates to: GTARLSLGTGEGTAR*GQAPSLQASPRNCV
Trigger: CACACAGTTGCGTGGGCTGGCTTGTAGGGAAGGAGCCTGTCCCCATCGCGCCGTTCCCTCTCCTGTCCCCAGGGAAAGACGAGCTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502323.5
CDS-3UTR CAA 90 bp GTGGCCTTCCCACTGGAGCTGTATTCCATGGTGATTCTAACAGGCTTGAGTGGAACGTGGGACCGATCCTaGAGCATCGCTGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: VAFPLELYSMVILTGLSGTWDRS*SIAATA
Trigger: TGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACGT...TCCACTCAAGCCTGTTAGAATCACCATGGAATACAGCTCCAGTGGGAAGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506453.1
CDS-3UTR CAA 90 bp AGAACTAGAACTGCATCTCCTGGTGGCAGTCGTCACCCTGAGAACAGGAACAAGGTGTTTCAACAGGGCTaGGTTGGCCATTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: RTRTASPGGSRHPENRNKVFQQG*VGHFWF
Trigger: GAACCAGAAATGGCCAACCAAGCCCTGTTGAAACAC...CTTGTTCCTGTTCTCAGGGTGACGACTGCCACCAGGAGATGCAGTTCTAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR CAA 90 bp TCCAGCAACCTGGTTCCTTGGTATTTACCCAAAGGAGCTGAAAACGAGTCTACAACGTGGGACCGATCCTaGAGCATCGCTGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: SSNLVPWYLPKGAENESTTWDRS*SIAATA
Trigger: TGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACGT...TGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACCAAGGAACCAGGTTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CAA 90 bp TCCAGCAACCTGGTTCCTTGGTATTTACCCAAAGGAGCTGAAAACGAGTCTACAAGCGATTCTCCTGCCTaGGCCTCCCAAGTAACTGGG +
Preference number: 5 (lower is better)
Translates to: SSNLVPWYLPKGAENESTSDSPA*ASQVTG
Trigger: CCCAGTTACTTGGGAGGCCAAGGCAGGAGAATCGCT...TGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACCAAGGAACCAGGTTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS GCA 90 bp TGGCCCATGTACATGCGGTGCTTCTCTAAGGCTTTCTGCACATCCTaGTCTGACTCCATTTCAATTAAGGCATCACCCCTTCGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: WPMYMRCFSKAFCTS*SDSISIKASPLRFP
Trigger: TGGGAAACGAAGGGGTGATGCCTTAATTGAAATGGAGTCAGAGCAGGATGTGCAGAAAGCCTTAGAGAAGCACCGCATGTACATGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp AGAACTAGAACTGCATCTCCTGGTGGCAGTCGTCACCCTGAGAACAGGAACAAGATTCCATTCTCACCGTaGCGGATTCTGCAGTCTGAA +
Preference number: 5 (lower is better)
Translates to: RTRTASPGGSRHPENRNKIPFSP*RILQSE
Trigger: TTCAGACTGCAGAATCCGCAACGGTGAGAATGGAAT...CTTGTTCCTGTTCTCAGGGTGACGACTGCCACCAGGAGATGCAGTTCTAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS GCA 90 bp CATTGTTTATCTCATATACTTCCACATACCGCTGGCCCATGTACATaGGGTGCTTCTCTAAGGCTTTCTGCACATCCTGCTCTGACTCCA +
Preference number: 5 (lower is better)
Translates to: HCLSHILPHTAGPCT*GASLRLSAHPALTP
Trigger: TGGAGTCAGAGCAGGATGTGCAGAAAGCCTTAGAGAAGCACCGCATGTACATGGGCCAGCGGTATGTGGAAGTATATGAGATAAACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp GAGCATCGCTGCAACAGCATCCTCATGGGTCTCAAAGTGCACATCAGCTTCTCCCTTCATTCCTTCTGCTaGGAAATATCTCGATGTATC +
Preference number: 5 (lower is better)
Translates to: EHRCNSILMGLKVHISFSLHSFC*EISRCI
Trigger: GATACATCGAGATATTTCCAAGCAGAAGGAATGAAG...GGAGAAGCTGATGTGCACTTTGAGACCCATGAGGATGCTGTTGCAGCGATGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506453.1
CDS-3UTR CAA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAACGTGGGACCGATCCTaGAGCATCGCTGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: ISLAVAANKLELYIPSPRTWDRS*SIAATA
Trigger: TGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACGT...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGACGTGGGACCGATCCTaGAGCATCGCTGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALTWDRS*SIAATA
Trigger: TGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACGT...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TCCAGCAACCTGGTTCCTTGGTATTTACCCAAAGGAGCTGAAAACGAGTCTACAAGAAGTAGTGAGAATTaGGAGCCTTCCTCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: SSNLVPWYLPKGAENESTRSSEN*EPSSQG
Trigger: TCCCTGGGAGGAAGGCTCCAAATTCTCACTACTTCT...TGTAGACTCGTTTTCAGCTCCTTTGGGTAAATACCAAGGAACCAGGTTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CAA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCGTGTTTCAACAGGGCTaGGTTGGCCATTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: AVAANKLELYIPSPRKMCVFQQG*VGHFWF
Trigger: GAACCAGAAATGGCCAACCAAGCCCTGTTGAAACAC...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAACGTGGGACCGATCCTaGAGCATCGCTGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: LTQNTKIISLAVAANKLETWDRS*SIAATA
Trigger: TGCTGTTGCAGCGATGCTCAAGGATCGGTCCCACGT...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGGGAGAGCTTCCCTaGTTCCAGGGCCCAATAGGA +
Preference number: 5 (lower is better)
Translates to: LTQNTKIISLAVAANKLELGELP*FQGPIG
Trigger: TCCTATTGGGCCCTGGAACAAGGGAAGCTCTCCCAG...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000499044.6
ENST00000514161.5
CDS-3UTR CAA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAACTGGGAGAGCTTCCCTaGTTCCAGGGCCCAATAGGA +
Preference number: 5 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKLGELP*FQGPIG
Trigger: TCCTATTGGGCCCTGGAACAAGGGAAGCTCTCCCAG...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000499044.6
ENST00000514161.5
CDS-3UTR CAA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATACTTCCTCTTCTAACTaGGACGGGGCCAATTCATAC +
Preference number: 5 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNTSSSN*DGANSY
Trigger: GTATGAATTGGCCCCGTCCAAGTTAGAAGAGGAAGT...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGACTTCCTCTTCTAACTaGGACGGGGCCAATTCATAC +
Preference number: 5 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVTSSSN*DGANSY
Trigger: GTATGAATTGGCCCCGTCCAAGTTAGAAGAGGAAGT...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATATTCCATTCTCACCGTaGCGGATTCTGCAGTCTGAA +
Preference number: 5 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNIPFSP*RILQSE
Trigger: TTCAGACTGCAGAATCCGCAACGGTGAGAATGGAAT...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCACCACAGGCGAAGATTaGACCTGCAAGCTCTTCATT +
Preference number: 5 (lower is better)
Translates to: AVAANKLELYIPSPRKMCTTGED*TCKLFI
Trigger: AATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGGT...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATTTCAACAGGGCTTGGTaGGCCATTTCTGGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SAKPYQFKGLKPFFALVNFNRAW*AISGSS
Trigger: TGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGAA...ATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAATCTCAGAGTTCTCCCTaGCACTCCGTAAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LTQNTKIISLAVAANKLESQSSP*HSVSSS
Trigger: GCTGCTGCTTACGGAGTGCAAGGGAGAACTCTGAGA...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CAA 90 bp AAGAGAAGACATAGTCTCTCTTCCAGGTATCACCTGTCAGAAACCTGGGCAAATAGATTCTCTTCTAATTaGCTGAACTTGGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: KRRHSLSSRYHLSETWANRFSSN*LNLGSG
Trigger: CCCACTCCCCAAGTTCAGCAAATTAGAAGAGAATCT...ATTTGCCCAGGTTTCTGACAGGTGATACCTGGAAGAGAGACTATGTCTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS TCA 90 bp AAAAAGTTAAGCACATCTTCCATAGTGCATGACCAGGGCAGTCCTTaGGCTCGAATGAGAAAGACATCATCCACTTCCTCTTCTAACTTG +
Preference number: 5 (lower is better)
Translates to: KKLSTSSIVHDQGSP*ARMRKTSSTSSSNL
Trigger: CAAGTTAGAAGAGGAAGTGGATGATGTCTTTCTCATTCGAGCTCAAGGACTGCCCTGGTCATGCACTATGGAAGATGTGCTTAACTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000508091.1
ENST00000514161.5
ENST00000545193.5
CDS TCA 90 bp GTCCTCTCAAACGAACCACACCATCATTTACCACAGGCGAAGATTTaGCCTGCAAGCTCTTCATTAAGGCATCCACATCTTCATTGTTTA +
Preference number: 5 (lower is better)
Translates to: VLSNEPHHHLPQAKI*PASSSLRHPHLHCL
Trigger: TAAACAATGAAGATGTGGATGCCTTAATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGGTAAATGATGGTGTGGTTCGTTTGAGAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAACTTCCTCTTCTAACTaGGACGGGGCCAATTCATAC +
Preference number: 5 (lower is better)
Translates to: ISLAVAANKLELYIPSPRTSSSN*DGANSY
Trigger: GTATGAATTGGCCCCGTCCAAGTTAGAAGAGGAAGT...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTATTCCATTCTCACCGTaGCGGATTCTGCAGTCTGAA +
Preference number: 5 (lower is better)
Translates to: KQKVLPHCDRSTALSINPIPFSP*RILQSE
Trigger: TTCAGACTGCAGAATCCGCAACGGTGAGAATGGAAT...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CAA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGATTCCATTCTCACCGTaGCGGATTCTGCAGTCTGAA +
Preference number: 5 (lower is better)
Translates to: LAVAANKLELYIPSPRKMIPFSP*RILQSE
Trigger: TTCAGACTGCAGAATCCGCAACGGTGAGAATGGAAT...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp AACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGACCACAGGCGAAGATTaGACCTGCAAGCTCTTCATT +
Preference number: 5 (lower is better)
Translates to: NYSAKPYQFKGLKPFFALTTGED*TCKLFI
Trigger: AATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGGT...CAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CAA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGACCACAGGCGAAGATTaGACCTGCAAGCTCTTCATT +
Preference number: 5 (lower is better)
Translates to: LAVAANKLELYIPSPRKMTTGED*TCKLFI
Trigger: AATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGGT...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCTTCTGGTTCTTCAAATaGCACATAGGCTTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: AVAANKLELYIPSPRKMCFWFFK*HIGFPC
Trigger: ACAGGGGAAGCCTATGTGCAATTTGAAGAACCAGAA...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCATTCAACAGGGCTTGGTaGGCCATTTCTGGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: QLLLINWNCISQVQERCAFNRAW*AISGSS
Trigger: TGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGAA...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTTCATGGCACACAATGTaGCCTTCAAACTGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: KQKVLPHCDRSTALSINPSWHTM*PSNWVP
Trigger: AGGAACCCAGTTTGAAGGCAACATTGTGTGCCATGA...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CAA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAAGGCATGAGAATTGCTaGAAACTGGGAGGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: LTQNTKIISLAVAANKLERHENC*KLGGGG
Trigger: GCCTCCACCTCCCAGTTTCAAGCAATTCTCATGCCT...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS GCA 90 bp CTCAAACGAACCACACCATCATTTACCACAGGCGAAGATTTGACCTaGAAGCTCTTCATTAAGGCATCCACATCTTCATTGTTTATCTCA +
Preference number: 5 (lower is better)
Translates to: LKRTTPSFTTGEDLT*KLFIKASTSSLFIS
Trigger: TGAGATAAACAATGAAGATGTGGATGCCTTAATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGGTAAATGATGGTGTGGTTCGTTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS CCA 90 bp GATATCTTACTGCCACACACGTTTATAATGTCTTGGGCATTGGCTTaGAAAGGTAATCCTCTCATGTGGACAAAATGCAGAGAAGACGTA +
Preference number: 5 (lower is better)
Translates to: DILLPHTFIMSWALA*KGNPLMWTKCREDV
Trigger: TACGTCTTCTCTGCATTTTGTCCACATGAGAGGATTACCTTTCCAAGCCAATGCCCAAGACATTATAAACGTGTGTGGCAGTAAGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505068.5
CDS-3UTR CAA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGATTCTGGTTCTTCAAATaGCACATAGGCTTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: ISLAVAANKLELYIPSPRFWFFK*HIGFPC
Trigger: ACAGGGGAAGCCTATGTGCAATTTGAAGAACCAGAA...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TCTAGAGCTGGTTTAAATTCAAGTGAAGCCATTAATTTTCTTACCAGTCTGGACGTGTTTCAACAGGGCTaGGTTGGCCATTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: SRAGLNSSEAINFLTSLDVFQQG*VGHFWF
Trigger: GAACCAGAAATGGCCAACCAAGCCCTGTTGAAACAC...GTCCAGACTGGTAAGAAAATTAATGGCTTCACTTGAATTTAAACCAGCTCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CAA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGTGTTTCAACAGGGCTaGGTTGGCCATTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: QLTQNTKIISLAVAANKLVFQQG*VGHFWF
Trigger: GAACCAGAAATGGCCAACCAAGCCCTGTTGAAACAC...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp AAGAGAAGACATAGTCTCTCTTCCAGGTATCACCTGTCAGAAACCTGGGCAAATTGTCACTTCACAGTTTaGAGACTAACAAACACCCTT +
Preference number: 5 (lower is better)
Translates to: KRRHSLSSRYHLSETWANCHFTV*RLTNTL
Trigger: AAGGGTGTTTGTTAGTCTCAAAACTGTGAAGTGACA...ATTTGCCCAGGTTTCTGACAGGTGATACCTGGAAGAGAGACTATGTCTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR CAA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAAAGCATACAGGATTTaGATTCTCCTACACAGGTGC +
Preference number: 5 (lower is better)
Translates to: AVAANKLELYIPSPRKMCKAYRI*ILLHRC
Trigger: GCACCTGTGTAGGAGAATCAAAATCCTGTATGCTTT...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS-3UTR CAA 90 bp GTGCTTCTCTTCCTTTCCCATAACTACATCCACCTTAGCAATCACTTACGTACTGGTACCGTCTTCCACTaGCATGGAAATAAGATTACT +
Preference number: 5 (lower is better)
Translates to: VLLFLSHNYIHLSNHLRTGTVFH*HGNKIT
Trigger: AGTAATCTTATTTCCATGCAAGTGGAAGACGGTACC...AGTACGTAAGTGATTGCTAAGGTGGATGTAGTTATGGGAAAGGAAGAGAAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CAA 90 bp CCATATATGAAAACGCATTTCCATCTAGGCAGTACTACTGATGATGTTAAGCTGTCTAATTTGCTGAACTaGGGGAGTGGGAGGGTAATG +
Preference number: 5 (lower is better)
Translates to: PYMKTHFHLGSTTDDVKLSNLLN*GSGRVM
Trigger: CATTACCCTCCCACTCCCCAAGTTCAGCAAATTAGA...CAGCTTAACATCATCAGTAGTACTGCCTAGATGGAAATGCGTTTTCATATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS CCA 90 bp CTATTGAGATTGGATATCTTACTGCCACACACGTTTATAATGTCTTaGGCATTGGCTTGGAAAGGTAATCCTCTCATGTGGACAAAATGC +
Preference number: 5 (lower is better)
Translates to: LLRLDILLPHTFIMS*ALAWKGNPLMWTKC
Trigger: GCATTTTGTCCACATGAGAGGATTACCTTTCCAAGCCAATGCCCAAGACATTATAAACGTGTGTGGCAGTAAGATATCCAATCTCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505068.5
CDS-3UTR CAA 90 bp CAGCAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCACTTCCTCTTCTAACTaGGACGGGGCCAATTCATAC +
Preference number: 5 (lower is better)
Translates to: QQNLKLFCQTIPVQRSETTSSSN*DGANSY
Trigger: GTATGAATTGGCCCCGTCCAAGTTAGAAGAGGAAGT...GGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CAA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGACTTCCTCTTCTAACTaGGACGGGGCCAATTCATAC +
Preference number: 5 (lower is better)
Translates to: QLTQNTKIISLAVAANKLTSSSN*DGANSY
Trigger: GTATGAATTGGCCCCGTCCAAGTTAGAAGAGGAAGT...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAAATTCCATTCTCACCGTaGCGGATTCTGCAGTCTGAA +
Preference number: 5 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKIPFSP*RILQSE
Trigger: TTCAGACTGCAGAATCCGCAACGGTGAGAATGGAAT...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGACCACAGGCGAAGATTaGACCTGCAAGCTCTTCATT +
Preference number: 5 (lower is better)
Translates to: QLTQNTKIISLAVAANKLTTGED*TCKLFI
Trigger: AATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGGT...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAACCACAGGCGAAGATTaGACCTGCAAGCTCTTCATT +
Preference number: 5 (lower is better)
Translates to: LTQNTKIISLAVAANKLETTGED*TCKLFI
Trigger: AATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGGT...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGTTCAACAGGGCTTGGTaGGCCATTTCTGGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: QLTQNTKIISLAVAANKLFNRAW*AISGSS
Trigger: TGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGAA...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAATTCAACAGGGCTTGGTaGGCCATTTCTGGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LTQNTKIISLAVAANKLEFNRAW*AISGSS
Trigger: TGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGAA...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACGTGTTTCAACAGGGCTaGGTTGGCCATTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHVFQQG*VGHFWF
Trigger: GAACCAGAAATGGCCAACCAAGCCCTGTTGAAACAC...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp CTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTAATAATGGCCACATTTaGTACAGAAAACTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LFCQTIPVQRSETVLCFGNNGHI*YRKLSL
Trigger: CAGGCTGAGTTTTCTGTACAAAATGTGGCCATTATT...ACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CAA 90 bp CAGATACCAGTTCTCATAGCTTGGCATATTCAACCATATATGAAAACGCATTTCTTCTGGTTCTTCAAATaGCACATAGGCTTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: QIPVLIAWHIQPYMKTHFFWFFK*HIGFPC
Trigger: ACAGGGGAAGCCTATGTGCAATTTGAAGAACCAGAA...GAAATGCGTTTTCATATATGGTTGAATATGCCAAGCTATGAGAACTGGTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CAA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAATTCTGGTTCTTCAAATaGCACATAGGCTTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: LTQNTKIISLAVAANKLEFWFFK*HIGFPC
Trigger: ACAGGGGAAGCCTATGTGCAATTTGAAGAACCAGAA...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAATTCTGGTTCTTCAAATaGCACATAGGCTTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKFWFFK*HIGFPC
Trigger: ACAGGGGAAGCCTATGTGCAATTTGAAGAACCAGAA...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp AAGCAGAAAGTACTGCCACATTGTGACAGAAGTACAGCTTTATCCATAAACCCTCTTCATTCCTTCTGCTaGGAAATATCTCGATGTATC +
Preference number: 5 (lower is better)
Translates to: KQKVLPHCDRSTALSINPLHSFC*EISRCI
Trigger: GATACATCGAGATATTTCCAAGCAGAAGGAATGAAG...AGGGTTTATGGATAAAGCTGTACTTCTGTCACAATGTGGCAGTACTTTCTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CAA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGCTTCATTCCTTCTGCTaGGAAATATCTCGATGTATC +
Preference number: 5 (lower is better)
Translates to: LAVAANKLELYIPSPRKMLHSFC*EISRCI
Trigger: GATACATCGAGATATTTCCAAGCAGAAGGAATGAAG...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp GCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAAAAGCTGTCATGGGTaGAATATCCTCATTTACTTC +
Preference number: 5 (lower is better)
Translates to: AVAANKLELYIPSPRKMCKSCHG*NILIYF
Trigger: GAAGTAAATGAGGATATTCAACCCATGACAGCTTTT...GCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCAAAAGTTTATAATGTCTaGGGCATTGGCTTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: QLLLINWNCISQVQERCAKVYNV*GIGLER
Trigger: CCTTTCCAAGCCAATGCCCAAGACATTATAAACTTT...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGCAAATGAAATGCTTCTaGCTTCACCCTTATTATCTG +
Preference number: 5 (lower is better)
Translates to: YSAKPYQFKGLKPFFALVQMKCF*LHPYYL
Trigger: CAGATAATAAGGGTGAAGCAAGAAGCATTTCATTTG...CACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGTCACTTCACAGTTTaGAGACTAACAAACACCCTT +
Preference number: 5 (lower is better)
Translates to: LAVAANKLELYIPSPRKMCHFTV*RLTNTL
Trigger: AAGGGTGTTTGTTAGTCTCAAAACTGTGAAGTGACA...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS GCA 90 bp TCTTTCCCTTATAAGAACCGACATGTGTTCGAACTTCATTCCTTCTaGTTGGAAATATCTCGATGTATCGATTACCAATTTCTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: SFPYKNRHVFELHSF*LEISRCIDYQFLPC
Trigger: ACAGGGAAGAAATTGGTAATCGATACATCGAGATATTTCCAAGCAGAAGGAATGAAGTTCGAACACATGTCGGTTCTTATAAGGGAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp AAGCCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTCTTCATTCCTTCTGCTaGGAAATATCTCGATGTATC +
Preference number: 5 (lower is better)
Translates to: KPLIFLPVWTVLTCHFTVLHSFC*EISRCI
Trigger: GATACATCGAGATATTTCCAAGCAGAAGGAATGAAG...AACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CAA 90 bp CTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGAAAAGCTGTCATGGGTaGAATATCCTCATTTACTTC +
Preference number: 5 (lower is better)
Translates to: LAVAANKLELYIPSPRKMKSCHG*NILIYF
Trigger: GAAGTAAATGAGGATATTCAACCCATGACAGCTTTT...CATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp ATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAAAGCTGTCATGGGTaGAATATCCTCATTTACTTC +
Preference number: 5 (lower is better)
Translates to: ISLAVAANKLELYIPSPRKSCHG*NILIYF
Trigger: GAAGTAAATGAGGATATTCAACCCATGACAGCTTTT...TCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTGCTAGGGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp AAGCCATTAATTTTCTTACCAGTCTGGACTGTTCTGACATGTCACTTCACAGTTAAAGTTTATAATGTCTaGGGCATTGGCTTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: KPLIFLPVWTVLTCHFTVKVYNV*GIGLER
Trigger: CCTTTCCAAGCCAATGCCCAAGACATTATAAACTTT...AACTGTGAAGTGACATGTCAGAACAGTCCAGACTGGTAAGAAAATTAATGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CAA 90 bp CAGTTGCTGCTAATAAACTGGAACTGTATATCCCAAGTCCAAGAAAGATGTGCACAAATGAAATGCTTCTaGCTTCACCCTTATTATCTG +
Preference number: 5 (lower is better)
Translates to: QLLLINWNCISQVQERCAQMKCF*LHPYYL
Trigger: CAGATAATAAGGGTGAAGCAAGAAGCATTTCATTTG...TGCACATCTTTCTTGGACTTGGGATATACAGTTCCAGTTTATTAGCAGCAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGAAAGCATACAGGATTTaGATTCTCCTACACAGGTGC +
Preference number: 5 (lower is better)
Translates to: QLTQNTKIISLAVAANKLKAYRI*ILLHRC
Trigger: GCACCTGTGTAGGAGAATCAAAATCCTGTATGCTTT...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254799.11
ENST00000545193.5
CDS GCA 90 bp AAAGACCATTTCTGGCTCAGTTATATACTTAGCAGTAGGAAAAGATaGGATTTTCTTTCCCTTATAAGAACCGACATGTGTTCGAACTTC +
Preference number: 5 (lower is better)
Translates to: KDHFWLSYILSSRKR*DFLSLIRTDMCSNF
Trigger: GAAGTTCGAACACATGTCGGTTCTTATAAGGGAAAGAAAATCGCATCTTTTCCTACTGCTAAGTATATAACTGAGCCAGAAATGGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAACTTCATTCCTTCTGCTaGGAAATATCTCGATGTATC +
Preference number: 5 (lower is better)
Translates to: LTQNTKIISLAVAANKLELHSFC*EISRCI
Trigger: GATACATCGAGATATTTCCAAGCAGAAGGAATGAAG...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAACTTCATTCCTTCTGCTaGGAAATATCTCGATGTATC +
Preference number: 5 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKLHSFC*EISRCI
Trigger: GATACATCGAGATATTTCCAAGCAGAAGGAATGAAG...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAAAAAGTTTATAATGTCTaGGGCATTGGCTTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKKVYNV*GIGLER
Trigger: CCTTTCCAAGCCAATGCCCAAGACATTATAAACTTT...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAAAAAGTTTATAATGTCTaGGGCATTGGCTTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LTQNTKIISLAVAANKLEKVYNV*GIGLER
Trigger: CCTTTCCAAGCCAATGCCCAAGACATTATAAACTTT...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGGAATGTCACTTCACAGTTTaGAGACTAACAAACACCCTT +
Preference number: 5 (lower is better)
Translates to: LTQNTKIISLAVAANKLECHFTV*RLTNTL
Trigger: AAGGGTGTTTGTTAGTCTCAAAACTGTGAAGTGACA...TTCCAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CAA 90 bp CAGATACCAGTTCTCATAGCTTGGCATATTCAACCATATATGAAAACGCATTTCTCATGTTGGAACAGTTaGGCAGTTTCTTCCAAAACT +
Preference number: 5 (lower is better)
Translates to: QIPVLIAWHIQPYMKTHFSCWNS*AVSSKT
Trigger: AGTTTTGGAAGAAACTGCCAAACTGTTCCAACATGA...GAAATGCGTTTTCATATATGGTTGAATATGCCAAGCTATGAGAACTGGTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CAA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGAAAAGCTGTCATGGGTaGAATATCCTCATTTACTTC +
Preference number: 5 (lower is better)
Translates to: QLTQNTKIISLAVAANKLKSCHG*NILIYF
Trigger: GAAGTAAATGAGGATATTCAACCCATGACAGCTTTT...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp CAGCAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCAAAAGCTGTCATGGGTaGAATATCCTCATTTACTTC +
Preference number: 5 (lower is better)
Translates to: QQNLKLFCQTIPVQRSETKSCHG*NILIYF
Trigger: GAAGTAAATGAGGATATTCAACCCATGACAGCTTTT...GGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS-3UTR CAA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAACAAATGAAATGCTTCTaGCTTCACCCTTATTATCTG +
Preference number: 5 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKQMKCF*LHPYYL
Trigger: CAGATAATAAGGGTGAAGCAAGAAGCATTTCATTTG...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp CAATTAACCCAAAACACCAAAATCATTTCCCTAGCAGTTGCTGCTAATAAACTGCATAAAACCGCCAAATaGTCATTTACACTAAGCTGT +
Preference number: 5 (lower is better)
Translates to: QLTQNTKIISLAVAANKLHKTAK*SFTLSC
Trigger: ACAGCTTAGTGTAAATGACAATTTGGCGGTTTTATG...CAGTTTATTAGCAGCAACTGCTAGGGAAATGATTTTGGTGTTTTGGGTTAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CAA 90 bp CAGCAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCCATAAAACCGCCAAATaGTCATTTACACTAAGCTGT +
Preference number: 5 (lower is better)
Translates to: QQNLKLFCQTIPVQRSETHKTAK*SFTLSC
Trigger: ACAGCTTAGTGTAAATGACAATTTGGCGGTTTTATG...GGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000545193.5
CDS-3UTR CAA 90 bp TACCAGTTCAAAGGTCTGAAACCGTTCTTTGCTTTGGTGAATGTTTGGTTAAAATTCAAAATAGTCATGTaGGAACAGTTTGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: YQFKGLKPFFALVNVWLKFKIVM*EQFGSF
Trigger: GAAACTGCCAAACTGTTCCAACATGACTATTTTGAA...TTTTAACCAAACATTCACCAAAGCAAAGAACGGTTTCAGACCTTTGAACTGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254799.11
CDS-3UTR CAA 90 bp AATAAATCACTGTTTCACTCCATGAGAAGTTTTACATCAGAGCACTCAATTCACAAAAGCTGTCATGGGTaGAATATCCTCATTTACTTC +
Preference number: 5 (lower is better)
Translates to: NKSLFHSMRSFTSEHSIHKSCHG*NILIYF
Trigger: GAAGTAAATGAGGATATTCAACCCATGACAGCTTTT...GTGAATTGAGTGCTCTGATGTAAAACTTCTCATGGAGTGAAACAGTGATTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000514161.5
ENST00000545193.5
CDS-3UTR CAA 90 bp CAAAATTTAAAACTATTCTGCCAAACCATACCAGTTCAAAGGTCTGAAACCGTTCAAATGAAATGCTTCTaGCTTCACCCTTATTATCTG +
Preference number: 5 (lower is better)
Translates to: QNLKLFCQTIPVQRSETVQMKCF*LHPYYL
Trigger: CAGATAATAAGGGTGAAGCAAGAAGCATTTCATTTG...AACGGTTTCAGACCTTTGAACTGGTATGGTTTGGCAGAATAGTTTTAAATTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000545193.5
CDS GCA 72 bp CGCAGCCCCGGAGCAGCGCCCCGAGTACCCAGCGCGTaGCGGCCATGGACTCCGGAGGCGGCGCAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: RSPGAAPRVPSA*RPWTPEAAQGL
Trigger: CAGGCCCTGCGCCGCCTCCGGAGTCCATGGCCGGCACGCGCTGGGTACTCGGGGCGCTGCTCCGGGGCTGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000505068.5
ENST00000545193.5
CDS GCA 72 bp GGCCCAATAGGAGCACAGGGTGGACGGGGGCGGGTGTaGGGCGAGTGTCGCGGATCCCCGGGCGTGCCCGCG +
Preference number: 6 (lower is better)
Translates to: GPIGAQGGRGRV*GECRGSPGVPA
Trigger: CGCGGGCACGCCCGGGGATCCGCGACACTCGCCGCACACCCGCCCCCGTCCACCCTGTGCTCCTATTGGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000499044.6
CDS CCA 72 bp GGAGCAGCGCCCCGAGTACCCAGCGCGTGCCGGCCATaGACTCCGGAGGCGGCGCAGGGCCTGAAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: GAAPRVPSACRP*TPEAAQGLKAA
Trigger: AGCTGCCTTCAGGCCCTGCGCCGCCTCCGGAGTCCATGGCCGGCACGCGCTGGGTACTCGGGGCGCTGCTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254799.11
ENST00000505068.5
ENST00000545193.5
CDS CCA 72 bp GCTTCCCTTGTTCCAGGGCCCAATAGGAGCACAGGGTaGACGGGGGCGGGTGTGCGGCGAGTGTCGCGGATC +
Preference number: 6 (lower is better)
Translates to: ASLVPGPNRSTG*TGAGVRRVSRI
Trigger: GATCCGCGACACTCGCCGCACACCCGCCCCCGTCCACCCTGTGCTCCTATTGGGCCCTGGAACAAGGGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000499044.6
ENST00000508091.1
CDS CCA 72 bp CGTCTTTCCCTGGGGACAGGAGAGGGAACGGCGCGATaGGGACAGGCTCCTTCCCTACAAGCCAGCCCACGC +
Preference number: 6 (lower is better)
Translates to: RLSLGTGEGTAR*GQAPSLQASPR
Trigger: GCGTGGGCTGGCTTGTAGGGAAGGAGCCTGTCCCCATCGCGCCGTTCCCTCTCCTGTCCCCAGGGAAAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502323.5
CDS GCA 72 bp ATGGACTCCGGAGGCGGCGCAGGGCCTGAAGGCAGCTaGTCCAGCAGCGATGGTGGAACGGAAGTGGAATCC +
Preference number: 6 (lower is better)
Translates to: MDSGGGAGPEGS*SSSDGGTEVES
Trigger: GGATTCCACTTCCGTTCCACCATCGCTGCTGGAGCAGCTGCCTTCAGGCCCTGCGCCGCCTCCGGAGTCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505068.5
CDS CAA 90 bp CGAGAACAAAACAAGCAGAAGACCCGACGCCTGGGAGAGCTTCCCTaGTTCCAGGGCCCAATAGGAGCACAGGGTGGACGGGGGCGGGTG +
Preference number: 6 (lower is better)
Translates to: REQNKQKTRRLGELP*FQGPIGAQGGRGRV
Trigger: CACCCGCCCCCGTCCACCCTGTGCTCCTATTGGGCCCTGGAACAAGGGAAGCTCTCCCAGGCGTCGGGTCTTCTGCTTGTTTTGTTCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000499044.6
ENST00000508091.1
CDS CAA 72 bp AACAAGCAGAAGACCCGACGCCTGGGAGAGCTTCCCTaGTTCCAGGGCCCAATAGGAGCACAGGGTGGACGG +
Preference number: 6 (lower is better)
Translates to: NKQKTRRLGELP*FQGPIGAQGGR
Trigger: CCGTCCACCCTGTGCTCCTATTGGGCCCTGGAACAAGGGAAGCTCTCCCAGGCGTCGGGTCTTCTGCTTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000499044.6
ENST00000508091.1
ENST00000514161.5
CDS GCA 72 bp TCTCATATACTTCCACATACCGCTGGCCCATGTACATaGGGTGCTTCTCTAAGGCTTTCTGCACATCCTGCT +
Preference number: 6 (lower is better)
Translates to: SHILPHTAGPCT*GASLRLSAHPA
Trigger: AGCAGGATGTGCAGAAAGCCTTAGAGAAGCACCGCATGTACATGGGCCAGCGGTATGTGGAAGTATATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS CAA 72 bp CGAATGAGAAAGACATCATCCACTTCCTCTTCTAACTaGGACGGGGCCAATTCATACTCAGGGGGTGGTGGA +
Preference number: 6 (lower is better)
Translates to: RMRKTSSTSSSN*DGANSYSGGGG
Trigger: TCCACCACCCCCTGAGTATGAATTGGCCCCGTCCAAGTTAGAAGAGGAAGTGGATGATGTCTTTCTCATTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000508091.1
ENST00000514161.5
ENST00000545193.5
CDS CAA 90 bp CCTGTGTTTCAACAGGGCTTGGTTGGCCATTTCTGGTTCTTCAAATaGCACATAGGCTTCCCCTGTTTTTCGCCTCCCTCTATAGTCCAT +
Preference number: 6 (lower is better)
Translates to: PVFQQGLVGHFWFFK*HIGFPCFSPPSIVH
Trigger: ATGGACTATAGAGGGAGGCGAAAAACAGGGGAAGCCTATGTGCAATTTGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGAAACACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000514161.5
ENST00000545193.5
CDS CAA 90 bp CTCGATGTATCGATTACCAATTTCTTCCCTGTGTTTCAACAGGGCTaGGTTGGCCATTTCTGGTTCTTCAAATTGCACATAGGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: LDVSITNFFPVFQQG*VGHFWFFKLHIGFP
Trigger: GGGGAAGCCTATGTGCAATTTGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGAAACACAGGGAAGAAATTGGTAATCGATACATCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000514161.5
ENST00000545193.5
CDS CCA 72 bp TTCCCTGTGTTTCAACAGGGCTTGGTTGGCCATTTCTaGTTCTTCAAATTGCACATAGGCTTCCCCTGTTTT +
Preference number: 6 (lower is better)
Translates to: FPVFQQGLVGHF*FFKLHIGFPCF
Trigger: AAAACAGGGGAAGCCTATGTGCAATTTGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGAAACACAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000514161.5
ENST00000545193.5
CDS CCA 72 bp CTGCCACACACGTTTATAATGTCTTGGGCATTGGCTTaGAAAGGTAATCCTCTCATGTGGACAAAATGCAGA +
Preference number: 6 (lower is better)
Translates to: LPHTFIMSWALA*KGNPLMWTKCR
Trigger: TCTGCATTTTGTCCACATGAGAGGATTACCTTTCCAAGCCAATGCCCAAGACATTATAAACGTGTGTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505068.5
CDS CAA 72 bp AAACGAACCACACCATCATTTACCACAGGCGAAGATTaGACCTGCAAGCTCTTCATTAAGGCATCCACATCT +
Preference number: 6 (lower is better)
Translates to: KRTTPSFTTGED*TCKLFIKASTS
Trigger: AGATGTGGATGCCTTAATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGGTAAATGATGGTGTGGTTCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS CAA 90 bp AGTCCTCTCAAACGAACCACACCATCATTTACCACAGGCGAAGATTaGACCTGCAAGCTCTTCATTAAGGCATCCACATCTTCATTGTTT +
Preference number: 6 (lower is better)
Translates to: SPLKRTTPSFTTGED*TCKLFIKASTSSLF
Trigger: AAACAATGAAGATGTGGATGCCTTAATGAAGAGCTTGCAGGTCAAATCTTCGCCTGTGGTAAATGATGGTGTGGTTCGTTTGAGAGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000506453.1
ENST00000514161.5
ENST00000545193.5
CDS CCA 72 bp TTGGATATCTTACTGCCACACACGTTTATAATGTCTTaGGCATTGGCTTGGAAAGGTAATCCTCTCATGTGG +
Preference number: 6 (lower is better)
Translates to: LDILLPHTFIMS*ALAWKGNPLMW
Trigger: CCACATGAGAGGATTACCTTTCCAAGCCAATGCCCAAGACATTATAAACGTGTGTGGCAGTAAGATATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505068.5
CDS GCA 72 bp TCAGTCCTGCAAAGAAGTCTACAATGTCTTTCTCATTaGAACTATAAGGAAGTCCTCTCAAACGAACCACAC +
Preference number: 6 (lower is better)
Translates to: SVLQRSLQCLSH*NYKEVLSNEPH
Trigger: GTGTGGTTCGTTTGAGAGGACTTCCTTATAGTTGCAATGAGAAAGACATTGTAGACTTCTTTGCAGGACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000514161.5
ENST00000545193.5
CDS CAA 72 bp TCGATTACCAATTTCTTCCCTGTGTTTCAACAGGGCTaGGTTGGCCATTTCTGGTTCTTCAAATTGCACATA +
Preference number: 6 (lower is better)
Translates to: SITNFFPVFQQG*VGHFWFFKLHI
Trigger: TATGTGCAATTTGAAGAACCAGAAATGGCCAACCAAGCCCTGTTGAAACACAGGGAAGAAATTGGTAATCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000514161.5
ENST00000545193.5
CDS CCA 72 bp AGAACCGACATGTGTTCGAACTTCATTCCTTCTGCTTaGAAATATCTCGATGTATCTGCAAAGAAGTCTACA +
Preference number: 6 (lower is better)
Translates to: RTDMCSNFIPSA*KYLDVSAKKST
Trigger: TGTAGACTTCTTTGCAGATACATCGAGATATTTCCAAGCAGAAGGAATGAAGTTCGAACACATGTCGGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506453.1
CDS CCA 72 bp AGAACCGACATGTGTTCGAACTTCATTCCTTCTGCTTaGAAATATCTCGATGTATCGATTACCAATTTCTTC +
Preference number: 6 (lower is better)
Translates to: RTDMCSNFIPSA*KYLDVSITNFF
Trigger: GAAGAAATTGGTAATCGATACATCGAGATATTTCCAAGCAGAAGGAATGAAGTTCGAACACATGTCGGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254799.11
ENST00000499044.6
ENST00000502323.5
ENST00000505068.5
ENST00000514161.5
ENST00000545193.5