Pregenerated sensors for GRK5-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000228485Ensembl transcript IDs: ENST00000421206.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTGACAAATGACAAAGTTGTTCCAGTCCTAACTTCTCAATTCCTGTaGTTGCTAGGGCCTCAGGAAAATGTGATCAATATTCCTTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: VTNDKVVPVLTSQFL*LLGPQENVINIPSG Trigger: ACCTGAAGGAATATTGATCACATTTTCCTGAGGCCCTAGCAAGCACAGGAATTGAGAAGTTAGGACTGGAACAACTTTGTCATTTGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421206.1 |
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| CDS GCA 72 bp | GACAAAGTTGTTCCAGTCCTAACTTCTCAATTCCTGTaGTTGCTAGGGCCTCAGGAAAATGTGATCAATATT | + |
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Preference number: 6 (lower is better) Translates to: DKVVPVLTSQFL*LLGPQENVINI Trigger: AATATTGATCACATTTTCCTGAGGCCCTAGCAAGCACAGGAATTGAGAAGTTAGGACTGGAACAACTTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421206.1 |
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| CDS CAA 72 bp | AAAGTTGTTCCAGTCCTAACTTCTCAATTCCTGTGCTaGCTAGGGCCTCAGGAAAATGTGATCAATATTCCT | + |
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Preference number: 6 (lower is better) Translates to: KVVPVLTSQFLC*LGPQENVINIP Trigger: AGGAATATTGATCACATTTTCCTGAGGCCCTAGCAAGCACAGGAATTGAGAAGTTAGGACTGGAACAACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421206.1 |
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| CDS CAA 90 bp | ACAAATGACAAAGTTGTTCCAGTCCTAACTTCTCAATTCCTGTGCTaGCTAGGGCCTCAGGAAAATGTGATCAATATTCCTTCAGGTATC | + |
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Preference number: 6 (lower is better) Translates to: TNDKVVPVLTSQFLC*LGPQENVINIPSGI Trigger: GATACCTGAAGGAATATTGATCACATTTTCCTGAGGCCCTAGCAAGCACAGGAATTGAGAAGTTAGGACTGGAACAACTTTGTCATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421206.1 |
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| CDS TCA 72 bp | TTCCTGTGTATTCTAATGTTTGGCAATTGTGACAAATaGCAAAGTTGTTCCAGTCCTAACTTCTCAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: FLCILMFGNCDK*QSCSSPNFSIP Trigger: AGGAATTGAGAAGTTAGGACTGGAACAACTTTGTCATTTGTCACAATTGCCAAACATTAGAATACACAGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421206.1 |
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