RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRINA (Homo sapiens)

Ensembl gene IDs: ENSG00000178719

Ensembl transcript IDs: ENST00000313269.5, ENST00000395068.9, ENST00000525513.1, ENST00000527194.5, ENST00000529301.5, ENST00000530898.1, ENST00000531992.1, ENST00000533044.5, ENST00000533377.1, ENST00000534791.5

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGCTCAATCCCTCTCCCCGGGACCTGGTGCTGCCCCCAGTCCCTaGGGTGGGCTGGCAGACAGGGCTCATGCAACAATGAGTAGACAG +
Preference number: 1 (lower is better)
Translates to: LAQSLSPGPGAAPSP*GGLADRAHATMSRQ
Trigger: CTGTCTACTCATTGTTGCATGAGCCCTGTCTGCCAGCCCACCCCAGGGACTGGGGGCAGCACCAGGTCCCGGGGAGAGGGATTGAGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
3UTR CCA 90 bp ATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTaGGGACAAGAGAGAGGGGAAGTACAGCTGGCACTGCCGTGCCAG +
Preference number: 1 (lower is better)
Translates to: IQEGWREASFSLGCA*GQERGEVQLALPCQ
Trigger: CTGGCACGGCAGTGCCAGCTGTACTTCCCCTCTCTCTTGTCCCCAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR CCA 90 bp CAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTaGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGGGGACAAGAG +
Preference number: 1 (lower is better)
Translates to: QRVQMEVSAVYIQEG*REASFSLGCAWGQE
Trigger: CTCTTGTCCCCAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR-3UTR GCA 90 bp GAGGGAAGACGTGCACCCTCACCTCTTGGCTCAATCCCTCTCCCCGGGACCTGGGAAACGTGGCCTTGGTaGCCCTTGGCGGGGGCGGGA +
Preference number: 2 (lower is better)
Translates to: EGRRAPSPLGSIPLPGTWETWPW*PLAGAG
Trigger: TCCCGCCCCCGCCAAGGGGCACCAAGGCCACGTTTC...CCAGGTCCCGGGGAGAGGGATTGAGCCAAGAGGTGAGGGTGCACGTCTTCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
3UTR-3UTR GCA 90 bp TGGGGTGGGCTGGCAGACAGGGCTCATGCAACAATGAGTAGACAGGAGGTGGCAGGTCCAGGCCAGCCGTaGCACCTGAGCGGGCACAGC +
Preference number: 2 (lower is better)
Translates to: WGGLADRAHATMSRQEVAGPGQP*HLSGHS
Trigger: GCTGTGCCCGCTCAGGTGGCACGGCTGGCCTGGACC...TGCCACCTCCTGTCTACTCATTGTTGCATGAGCCCTGTCTGCCAGCCCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
3UTR-3UTR TCA 90 bp GGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGCCAGCCGTGCCACCTaGGCGGGCACAGCGAGCTGG +
Preference number: 2 (lower is better)
Translates to: GHSGSKWKYLQCTYRRVGASRAT*AGTASW
Trigger: CCAGCTCGCTGTGCCCGCTCAGGTGGCACGGCTGGC...TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR-3UTR GCA 90 bp AAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACAGGTCCAGGCCAGCCGTaGCACCTGAGCGGGCACAGC +
Preference number: 2 (lower is better)
Translates to: KGPCCGHSGSKWKYLQCTGPGQP*HLSGHS
Trigger: GCTGTGCCCGCTCAGGTGGCACGGCTGGCCTGGACC...TGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR-3UTR GCA 90 bp AAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACACAGCTGGCACTGCCGTaGCAGGGGCAGGGTCCAGGC +
Preference number: 2 (lower is better)
Translates to: KGPCCGHSGSKWKYLQCTQLALP*QGQGPG
Trigger: GCCTGGACCCTGCCCCTGGCACGGCAGTGCCAGCTG...TGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR-3UTR TCA 90 bp CCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGCCAGCCGTGCCACCTaGGCGGGCACAGCGAGCTGG +
Preference number: 2 (lower is better)
Translates to: PQRVQMEVSAVYIQEGWRASRAT*AGTASW
Trigger: CCAGCTCGCTGTGCCCGCTCAGGTGGCACGGCTGGC...TCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR-3UTR GCA 90 bp CTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTGGTCCAGGCCAGCCGTaGCACCTGAGCGGGCACAGC +
Preference number: 2 (lower is better)
Translates to: LWPQRVQMEVSAVYIQEGGPGQP*HLSGHS
Trigger: GCTGTGCCCGCTCAGGTGGCACGGCTGGCCTGGACC...ACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR-3UTR GCA 90 bp AGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGCAGCTGGCACTGCCGTaGCAGGGGCAGGGTCCAGGC +
Preference number: 2 (lower is better)
Translates to: SVHTGGLERGILFPRLCLQLALP*QGQGPG
Trigger: GCCTGGACCCTGCCCCTGGCACGGCAGTGCCAGCTG...CAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR-3UTR CCA 90 bp GGACTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGGAGGGGAAGTACAGCTaGCACTGCCGTGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: GLKGPCCGHSGSKWKYLQEGKYS*HCRARG
Trigger: GCCCCTGGCACGGCAGTGCCAGCTGTACTTCCCCTC...CTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR-3UTR CCA 90 bp TGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCGAGGGGAAGTACAGCTaGCACTGCCGTGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: CSVHTGGLERGILFPRLCEGKYS*HCRARG
Trigger: GCCCCTGGCACGGCAGTGCCAGCTGTACTTCCCCTC...GCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR-3UTR CCA 90 bp GGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATGAGGGGAAGTACAGCTaGCACTGCCGTGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: GSKWKYLQCTYRRVGERHEGKYS*HCRARG
Trigger: GCCCCTGGCACGGCAGTGCCAGCTGTACTTCCCCTC...ATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR-3UTR CCA 90 bp GCAACAATGAGTAGACAGGAGGTGGCACGGAAACGTGGCCTTGGTGCCCCTTGGCACAGCGGGTCCAAATaGAAGTATCTGCAGTGTACA +
Preference number: 2 (lower is better)
Translates to: ATMSRQEVARKRGLGAPWHSGSK*KYLQCT
Trigger: TGTACACTGCAGATACTTCCATTTGGACCCGCTGTG...CCAAGGGGCACCAAGGCCACGTTTCCGTGCCACCTCCTGTCTACTCATTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
3UTR CAA 90 bp ACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTaGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGGGGACAAGA +
Preference number: 2 (lower is better)
Translates to: TAGPNGSICSVHTGG*ERGILFPRLCLGTR
Trigger: TCTTGTCCCCAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR GCA 72 bp CATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTaGAGTGTACATACAGGAGGGTTGGAGAGAGGCATC +
Preference number: 3 (lower is better)
Translates to: HAVATAGPNGSI*SVHTGGLERGI
Trigger: GATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR CCA 72 bp CTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATaGAAGTATCTGCAGTGTACATACAGGAGGGTTGGA +
Preference number: 3 (lower is better)
Translates to: LKGPCCGHSGSK*KYLQCTYRRVG
Trigger: TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR CCA 72 bp CAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTaGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: QMEVSAVYIQEG*REASFSLGCAW
Trigger: CCAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp GGGGCAGGGTCCAGGCCAGCCGTGCCACCTGAGCGGGCACAGCGAGCTGGAGCTGCCAGCCGTGCCACCTaGGCGGGCACAGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GAGSRPAVPPERAQRAGAASRAT*AGTASW
Trigger: CCAGCTCGCTGTGCCCGCTCAGGTGGCACGGCTGGC...AGCTCCAGCTCGCTGTGCCCGCTCAGGTGGCACGGCTGGCCTGGACCCTGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp GGGGCAGGGTCCAGGCCAGCCGTGCCACCTGAGCGGGCACAGCGAGCTGGAGCTGGTCCAGGCCAGCCGTaGCACCTGAGCGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GAGSRPAVPPERAQRAGAGPGQP*HLSGHS
Trigger: GCTGTGCCCGCTCAGGTGGCACGGCTGGCCTGGACC...AGCTCCAGCTCGCTGTGCCCGCTCAGGTGGCACGGCTGGCCTGGACCCTGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp GGGGCAGGGTCCAGGCCAGCCGTGCCACCTGAGCGGGCACAGCGAGCTGGAGCTACGGAAACGTGGCCTTaGTGCCCCTTGGCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: GAGSRPAVPPERAQRAGATETWP*CPLAGA
Trigger: CGCCCCCGCCAAGGGGCACCAAGGCCACGTTTCCGT...AGCTCCAGCTCGCTGTGCCCGCTCAGGTGGCACGGCTGGCCTGGACCCTGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp GGGGCAGGGTCCAGGCCAGCCGTGCCACCTGAGCGGGCACAGCGAGCTGGAGCTTGCTCTACGCCAGGCTaGGGAGCTGGGACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GAGSRPAVPPERAQRAGACSTPG*GAGTGG
Trigger: CCCTCCTGTCCCAGCTCCCCAGCCTGGCGTAGAGCA...AGCTCCAGCTCGCTGTGCCCGCTCAGGTGGCACGGCTGGCCTGGACCCTGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp AAGACGTGCACCCTCACCTCTTGGCTCAATCCCTCTCCCCGGGACCTGGTGCTGCTCCCCGGGACCTGGTaGTGCCCCCAGTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KTCTLTSWLNPSPRDLVLLPGTW*CPQSLG
Trigger: CCCCAGGGACTGGGGGCAGCACCAGGTCCCGGGGAG...CAGCACCAGGTCCCGGGGAGAGGGATTGAGCCAAGAGGTGAGGGTGCACGTCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp AAGACGTGCACCCTCACCTCTTGGCTCAATCCCTCTCCCCGGGACCTGGTGCTGGCCATGGGGGTACCCTaGCTGACCGTAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KTCTLTSWLNPSPRDLVLAMGVP*LTVGGG
Trigger: CCCTCCCCCTACGGTCAGCCAGGGTACCCCCATGGC...CAGCACCAGGTCCCGGGGAGAGGGATTGAGCCAAGAGGTGAGGGTGCACGTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR TCA 90 bp GGACTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGGCCAGCCGTGCCACCTaGGCGGGCACAGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLKGPCCGHSGSKWKYLQASRAT*AGTASW
Trigger: CCAGCTCGCTGTGCCCGCTCAGGTGGCACGGCTGGC...CTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp AAGACGTGCACCCTCACCTCTTGGCTCAATCCCTCTCCCCGGGACCTGGTGCTGGAGGGGAAGTACAGCTaGCACTGCCGTGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KTCTLTSWLNPSPRDLVLEGKYS*HCRARG
Trigger: GCCCCTGGCACGGCAGTGCCAGCTGTACTTCCCCTC...CAGCACCAGGTCCCGGGGAGAGGGATTGAGCCAAGAGGTGAGGGTGCACGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp TGGGGTGGGCTGGCAGACAGGGCTCATGCAACAATGAGTAGACAGGAGGTGGCAGCTGCCCCCAGTCCCTaGGGTGGGCTGGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: WGGLADRAHATMSRQEVAAAPSP*GGLADR
Trigger: CCTGTCTGCCAGCCCACCCCAGGGACTGGGGGCAGC...TGCCACCTCCTGTCTACTCATTGTTGCATGAGCCCTGTCTGCCAGCCCACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR TCA 90 bp AAGACGTGCACCCTCACCTCTTGGCTCAATCCCTCTCCCCGGGACCTGGTGCTGGAGCAGAGCGCCCAGTaGGGCGTACACGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: KTCTLTSWLNPSPRDLVLEQSAQ*GVHDLQ
Trigger: CTGGAGATCGTGTACGCCTCACTGGGCGCTCTGCTC...CAGCACCAGGTCCCGGGGAGAGGGATTGAGCCAAGAGGTGAGGGTGCACGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp GGACTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGGGTCCAGGCCAGCCGTaGCACCTGAGCGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GLKGPCCGHSGSKWKYLQGPGQP*HLSGHS
Trigger: GCTGTGCCCGCTCAGGTGGCACGGCTGGCCTGGACC...CTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp ATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGGGGACAACCCGGGACCTGGTGCTaGCCCCAGTCCCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: IQEGWREASFSLGCAWGQPGTWC*PQSLGW
Trigger: CCACCCCAGGGACTGGGGGCAGCACCAGGTCCCGGG...TTGTCCCCAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR TCA 90 bp AAGACGTGCACCCTCACCTCTTGGCTCAATCCCTCTCCCCGGGACCTGGTGCTGCGCCCATGCATGAGGTaGAGTCGTAGCGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KTCTLTSWLNPSPRDLVLRPCMR*SRSGSA
Trigger: TGCAGACCCGCTACGACTTCACCTCATGCATGGGCG...CAGCACCAGGTCCCGGGGAGAGGGATTGAGCCAAGAGGTGAGGGTGCACGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp ACTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGCAGCTGGCACTGCCGTaGCAGGGGCAGGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TKGAMLWPQRVQMEVSAVQLALP*QGQGPG
Trigger: GCCTGGACCCTGCCCCTGGCACGGCAGTGCCAGCTG...CACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp GGGGCAGGGTCCAGGCCAGCCGTGCCACCTGAGCGGGCACAGCGAGCTGGAGCTCCAAATGGAAGTATCTaGAGTGTACATACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GAGSRPAVPPERAQRAGAPNGSI*SVHTGG
Trigger: CCCTCCTGTATGTACACTGCAGATACTTCCATTTGG...AGCTCCAGCTCGCTGTGCCCGCTCAGGTGGCACGGCTGGCCTGGACCCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp TGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCCCGGGACCTGGTGCTaGCCCCAGTCCCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: CSVHTGGLERGILFPRLCPGTWC*PQSLGW
Trigger: CCACCCCAGGGACTGGGGGCAGCACCAGGTCCCGGG...GCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp ATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGGGGACAAGGTCAGAGGCGCTCCTaGGCTCGGGCCGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: IQEGWREASFSLGCAWGQGQRRS*ARAGDS
Trigger: TGAGTCCCCGGCCCGAGCCCAGGAGCGCCTCTGACC...TTGTCCCCAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000313269.5
CDS-3UTR TCA 90 bp TGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGCCAGCCGTGCCACCTaGGCGGGCACAGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CGHSGSKWKYLQCTYRRVASRAT*AGTASW
Trigger: CCAGCTCGCTGTGCCCGCTCAGGTGGCACGGCTGGC...AACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp GCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGCTGGGCCTGCGCCTaGGGCTCGGAAGACGCAGCG +
Preference number: 4 (lower is better)
Translates to: ATAGPNGSICSVHTGGLESWACA*GSEDAA
Trigger: CGCTGCGTCTTCCGAGCCGCAGGCGCAGGCCCAGCT...CTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp CATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGACTCCCCGGGACCTGGTaGTGCCCCCAGTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HAVATAGPNGSICSVHTGLPGTW*CPQSLG
Trigger: CCCCAGGGACTGGGGGCAGCACCAGGTCCCGGGGAG...TCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp ATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGGGGACAAACGGAAACGTGGCCTTaGTGCCCCTTGGCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: IQEGWREASFSLGCAWGQTETWP*CPLAGA
Trigger: CGCCCCCGCCAAGGGGCACCAAGGCCACGTTTCCGT...TTGTCCCCAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp GCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGGCTGCCCCCAGTCCCTaGGGTGGGCTGGCAGACAGG +
Preference number: 4 (lower is better)
Translates to: ATAGPNGSICSVHTGGLEAAPSP*GGLADR
Trigger: CCTGTCTGCCAGCCCACCCCAGGGACTGGGGGCAGC...CTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR TCA 90 bp GGACTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGGAGCAGAGCGCCCAGTaGGGCGTACACGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLKGPCCGHSGSKWKYLQEQSAQ*GVHDLQ
Trigger: CTGGAGATCGTGTACGCCTCACTGGGCGCTCTGCTC...CTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp AAGACGTGCACCCTCACCTCTTGGCTCAATCCCTCTCCCCGGGACCTGGTGCTGGGGCTCATGCAACAATaGGTAGACAGGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: KTCTLTSWLNPSPRDLVLGLMQQ*VDRRWH
Trigger: GTGCCACCTCCTGTCTACTCATTGTTGCATGAGCCC...CAGCACCAGGTCCCGGGGAGAGGGATTGAGCCAAGAGGTGAGGGTGCACGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp CCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGCGGCCACGCTCGGATaGGCAAGATCCGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PQRVQMEVSAVYIQEGWRAATLG*ARSAWG
Trigger: CCCCCACGCGGATCTTGCGCATCCGAGCGTGGCCGC...TCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313269.5
CDS-3UTR GCA 90 bp ATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGGGTCCAGGCCAGCCGTaGCACCTGAGCGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: ICSVHTGGLERGILFPRLGPGQP*HLSGHS
Trigger: GCTGTGCCCGCTCAGGTGGCACGGCTGGCCTGGACC...CAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp CTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTGAAACGTGGCCTTGGTaGCCCTTGGCGGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: LWPQRVQMEVSAVYIQEGETWPW*PLAGAG
Trigger: TCCCGCCCCCGCCAAGGGGCACCAAGGCCACGTTTC...ACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp TGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGGAAACGTGGCCTTGGTaGCCCTTGGCGGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: WPQRVQMEVSAVYIQEGWETWPW*PLAGAG
Trigger: TCCCGCCCCCGCCAAGGGGCACCAAGGCCACGTTTC...CCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp TGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCGAAACGTGGCCTTGGTaGCCCTTGGCGGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: CSVHTGGLERGILFPRLCETWPW*PLAGAG
Trigger: TCCCGCCCCCGCCAAGGGGCACCAAGGCCACGTTTC...GCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp GGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGCCATGGGGGTACCCTaGCTGACCGTAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GHSGSKWKYLQCTYRRVGAMGVP*LTVGGG
Trigger: CCCTCCCCCTACGGTCAGCCAGGGTACCCCCATGGC...TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp AAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACAGCGGGCACAGCGAGCTaGAGCTCGGCTACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KGPCCGHSGSKWKYLQCTAGTAS*SSATPW
Trigger: CCAAGGAGTAGCCGAGCTCCAGCTCGCTGTGCCCGC...TGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp ATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGGGGACAAGCGGGCACAGCGAGCTaGAGCTCGGCTACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: IQEGWREASFSLGCAWGQAGTAS*SSATPW
Trigger: CCAAGGAGTAGCCGAGCTCCAGCTCGCTGTGCCCGC...TTGTCCCCAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp GAGGGAAGACGTGCACCCTCACCTCTTGGCTCAATCCCTCTCCCCGGGACCTGGTCACTGACAACAAATTaGGAGGAAGGCTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: EGRRAPSPLGSIPLPGTWSLTTN*EEGFPL
Trigger: GAGGGGGAAGCCTTCCTCTCAATTTGTTGTCAGTGA...CCAGGTCCCGGGGAGAGGGATTGAGCCAAGAGGTGAGGGTGCACGTCTTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp TGGGGTGGGCTGGCAGACAGGGCTCATGCAACAATGAGTAGACAGGAGGTGGCAACAAGGTTCCAGGGGTaGTTTCGCCGGAAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: WGGLADRAHATMSRQEVATRFQG*FRRKSP
Trigger: TGGGGACTTCCGGCGAAAGCACCCCTGGAACCTTGT...TGCCACCTCCTGTCTACTCATTGTTGCATGAGCCCTGTCTGCCAGCCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp GCAACAATGAGTAGACAGGAGGTGGCACGGAAACGTGGCCTTGGTGCCCCTTGGGGTCAGGACCGACAGTaGAACAAGGTTCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ATMSRQEVARKRGLGAPWGQDRQ*NKVPGV
Trigger: CACCCCTGGAACCTTGTTGCACTGTCGGTCCTGACC...CCAAGGGGCACCAAGGCCACGTTTCCGTGCCACCTCCTGTCTACTCATTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp GGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCAGCTGGCACTGCCGTaGCAGGGGCAGGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSKWKYLQCTYRRVGERHQLALP*QGQGPG
Trigger: GCCTGGACCCTGCCCCTGGCACGGCAGTGCCAGCTG...ATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp ATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGGGGACAAGGACTAAAGGGGCCATaGTGTGGCCACAGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: IQEGWREASFSLGCAWGQGLKGP*CGHSGS
Trigger: GGACCCGCTGTGGCCACAGCATGGCCCCTTTAGTCC...TTGTCCCCAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp GCAACAATGAGTAGACAGGAGGTGGCACGGAAACGTGGCCTTGGTGCCCCTTGGCCGGATATCCAGGGTTaGGGGGAGGATAGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: ATMSRQEVARKRGLGAPWPDIQG*GEDSCP
Trigger: GGGACAACTATCCTCCCCCCAACCCTGGATATCCGG...CCAAGGGGCACCAAGGCCACGTTTCCGTGCCACCTCCTGTCTACTCATTGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp GGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGCGGGCACAGCGAGCTaGAGCTCGGCTACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GHSGSKWKYLQCTYRRVGAGTAS*SSATPW
Trigger: CCAAGGAGTAGCCGAGCTCCAGCTCGCTGTGCCCGC...TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp TGGGGTGGGCTGGCAGACAGGGCTCATGCAACAATGAGTAGACAGGAGGTGGCAAAAGGGGCCATGCTGTaGCCACAGCGGGTCCAAATG +
Preference number: 4 (lower is better)
Translates to: WGGLADRAHATMSRQEVAKGAML*PQRVQM
Trigger: CATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTT...TGCCACCTCCTGTCTACTCATTGTTGCATGAGCCCTGTCTGCCAGCCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp GCAACAATGAGTAGACAGGAGGTGGCACGGAAACGTGGCCTTGGTGCCCCTTGGAAAGGGGCCATGCTGTaGCCACAGCGGGTCCAAATG +
Preference number: 4 (lower is better)
Translates to: ATMSRQEVARKRGLGAPWKGAML*PQRVQM
Trigger: CATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTT...CCAAGGGGCACCAAGGCCACGTTTCCGTGCCACCTCCTGTCTACTCATTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp CCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAACGGAAACGTGGCCTTaGTGCCCCTTGGCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: PQRVQMEVSAVYIQEGWRTETWP*CPLAGA
Trigger: CGCCCCCGCCAAGGGGCACCAAGGCCACGTTTCCGT...TCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp AAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACAGTCCCTGGGGTGGGCTaGCAGACAGGGCTCATGCAA +
Preference number: 4 (lower is better)
Translates to: KGPCCGHSGSKWKYLQCTVPGVG*QTGLMQ
Trigger: TTGCATGAGCCCTGTCTGCCAGCCCACCCCAGGGAC...TGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp AGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGTGCTCTACGCCAGGCTaGGGAGCTGGGACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SVHTGGLERGILFPRLCLCSTPG*GAGTGG
Trigger: CCCTCCTGTCCCAGCTCCCCAGCCTGGCGTAGAGCA...CAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR TCA 90 bp AGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGGAGCAGAGCGCCCAGTaGGGCGTACACGATCTCCAG +
Preference number: 4 (lower is better)
Translates to: SVHTGGLERGILFPRLCLEQSAQ*GVHDLQ
Trigger: CTGGAGATCGTGTACGCCTCACTGGGCGCTCTGCTC...CAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp AGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGCTGCGAGGAAGCAGGTaGAGAGCAGAGCGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SVHTGGLERGILFPRLCLLRGSR*RAERPV
Trigger: CACTGGGCGCTCTGCTCTTCACCTGCTTCCTCGCAG...CAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp TGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGCTGCGAGGAAGCAGGTaGAGAGCAGAGCGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: WPQRVQMEVSAVYIQEGWLRGSR*RAERPV
Trigger: CACTGGGCGCTCTGCTCTTCACCTGCTTCCTCGCAG...CCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp GAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAAGCTGGGCCTGCGCCTaGGGCTCGGAAGACGCAGCG +
Preference number: 4 (lower is better)
Translates to: EVSAVYIQEGWREASFSLSWACA*GSEDAA
Trigger: CGCTGCGTCTTCCGAGCCGCAGGCGCAGGCCCAGCT...TAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp ATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGGGGACAAGGGCTCAGGGACAGCTaGTTGTTCCCCAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: IQEGWREASFSLGCAWGQGLRDS*LFPSSS
Trigger: GCTGCTACTGGGGAACAAGCAGCTGTCCCTGAGCCC...TTGTCCCCAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp GGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGGACTAAAGGGGCCATaGTGTGGCCACAGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: GHSGSKWKYLQCTYRRVGGLKGP*CGHSGS
Trigger: GGACCCGCTGTGGCCACAGCATGGCCCCTTTAGTCC...TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp CCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGGGAAGTACAGCTaGCACTGCCGTGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PQRVQMEVSAVYIQEGWREGKYS*HCRARG
Trigger: GCCCCTGGCACGGCAGTGCCAGCTGTACTTCCCCTC...TCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp CATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGTGGCACGGAAACGTaGCCTTGGTGCCCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: HAVATAGPNGSICSVHTGGGTET*PWCPLA
Trigger: CGCCAAGGGGCACCAAGGCCACGTTTCCGTGCCACC...TCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp AGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGCCATGTACGACAGGCTaGCGGTCAGGACCGACTCCG +
Preference number: 4 (lower is better)
Translates to: SVHTGGLERGILFPRLCLPCTTG*RSGPTP
Trigger: CGGAGTCGGTCCTGACCGCCAGCCTGTCGTACATGG...CAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527194.5
CDS-3UTR TCA 90 bp AGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGCGCCCATGCATGAGGTaGAGTCGTAGCGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SVHTGGLERGILFPRLCLRPCMR*SRSGSA
Trigger: TGCAGACCCGCTACGACTTCACCTCATGCATGGGCG...CAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp AGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGGAGCACGCCCATGCATaGGGTGAAGTCGTAGCGGGT +
Preference number: 4 (lower is better)
Translates to: SVHTGGLERGILFPRLCLEHAHA*GEVVAG
Trigger: ACCCGCTACGACTTCACCTCATGCATGGGCGTGCTC...CAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp GCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGGAGCACGCCCATGCATaGGGTGAAGTCGTAGCGGGT +
Preference number: 4 (lower is better)
Translates to: ATAGPNGSICSVHTGGLEEHAHA*GEVVAG
Trigger: ACCCGCTACGACTTCACCTCATGCATGGGCGTGCTC...CTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp TGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTCTGCGAGGAAGCAGGTaGAGAGCAGAGCGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CGHSGSKWKYLQCTYRRVLRGSR*RAERPV
Trigger: CACTGGGCGCTCTGCTCTTCACCTGCTTCCTCGCAG...AACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp GCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGGGGCTCAGGGACAGCTaGTTGTTCCCCAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ATAGPNGSICSVHTGGLEGLRDS*LFPSSS
Trigger: GCTGCTACTGGGGAACAAGCAGCTGTCCCTGAGCCC...CTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp CATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGACTAAAGGGGCCATaGTGTGGCCACAGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: HAVATAGPNGSICSVHTGGLKGP*CGHSGS
Trigger: GGACCCGCTGTGGCCACAGCATGGCCCCTTTAGTCC...TCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp GCAACAATGAGTAGACAGGAGGTGGCACGGAAACGTGGCCTTGGTGCCCCTTGGTGTCATCCCAGTTGGTaGCAGGGAAGTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ATMSRQEVARKRGLGAPWCHPSW*QGSPGC
Trigger: ACAACCAGGACTTCCCTGCCACCAACTGGGATGACA...CCAAGGGGCACCAAGGCCACGTTTCCGTGCCACCTCCTGTCTACTCATTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp GGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGATGCACCCTCACCTCTTaGCTCAATCCCTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GHSGSKWKYLQCTYRRVGCTLTS*LNPSPR
Trigger: CCGGGGAGAGGGATTGAGCCAAGAGGTGAGGGTGCA...TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR TCA 90 bp CTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTGTTTCCATGCTGGGGTaGGTCAGGGTCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LWPQRVQMEVSAVYIQEGVSMLG*VRVLSW
Trigger: CCAGGACAAGACCCTGACTCACCCCAGCATGGAAAC...ACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR TCA 90 bp TGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGGGAACACCTTGCGGATaGAGGCCTGTCGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: WPQRVQMEVSAVYIQEGWGTPCG*RPVGCS
Trigger: AGAGCATCCGACAGGCCTTCATCCGCAAGGTGTTCC...CCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp CTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTGGAACACCTTGCGGATaGAGGCCTGTCGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: LWPQRVQMEVSAVYIQEGGTPCG*RPVGCS
Trigger: AGAGCATCCGACAGGCCTTCATCCGCAAGGTGTTCC...ACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp CCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGCACGCCCATGCATaGGGTGAAGTCGTAGCGGGT +
Preference number: 4 (lower is better)
Translates to: PQRVQMEVSAVYIQEGWREHAHA*GEVVAG
Trigger: ACCCGCTACGACTTCACCTCATGCATGGGCGTGCTC...TCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp AAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACAGGATGCGGTTCCGGATaGAGATGCAGAGAATGGCGA +
Preference number: 4 (lower is better)
Translates to: KGPCCGHSGSKWKYLQCTGCGSG*RCREWR
Trigger: TCGCCATTCTCTGCATCTTCATCCGGAACCGCATCC...TGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp GTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCGGCTTCCCCCTCCCCTaGAACATGCCATCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VSAVYIQEGWREASFSLGGFPLP*NMPSSL
Trigger: CAGAGAGGATGGCATGTTTCAGGGGAGGGGGAAGCC...GCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR TCA 90 bp TGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGCTTCCCCCTCCCCTaGAACATGCCATCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: CGHSGSKWKYLQCTYRRVGFPLP*NMPSSL
Trigger: CAGAGAGGATGGCATGTTTCAGGGGAGGGGGAAGCC...AACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp ATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGGGGACAAAGGGTCACCGACAGCTaGAAGGTCAGCACTAGGAAC +
Preference number: 4 (lower is better)
Translates to: IQEGWREASFSLGCAWGQRVTDS*KVSTRN
Trigger: GTTCCTAGTGCTGACCTTGCAGCTGTCGGTGACCCT...TTGTCCCCAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp GCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGACAAGGTTCCAGGGGTaGTTTCGCCGGAAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ATAGPNGSICSVHTGGLETRFQG*FRRKSP
Trigger: TGGGGACTTCCGGCGAAAGCACCCCTGGAACCTTGT...CTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp TGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCGGTCAGGACCGACAGTaGAACAAGGTTCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: CSVHTGGLERGILFPRLCGQDRQ*NKVPGV
Trigger: CACCCCTGGAACCTTGTTGCACTGTCGGTCCTGACC...GCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp GGACTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGCACGGCCATGATGACTaGCTCGGTGTTGTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GLKGPCCGHSGSKWKYLQHGHDD*LGVVEA
Trigger: AGCTTCTACAACACCGAGGCAGTCATCATGGCCGTG...CTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp TGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGGCTCAGGGACAGCTaGTTGTTCCCCAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: CGHSGSKWKYLQCTYRRVGLRDS*LFPSSS
Trigger: GCTGCTACTGGGGAACAAGCAGCTGTCCCTGAGCCC...AACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp CTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTCCCTCCCCTGAAACATaGCATCCTCTCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LWPQRVQMEVSAVYIQEGPSPET*HPLCPQ
Trigger: CTGAGGGCAGAGAGGATGGCATGTTTCAGGGGAGGG...ACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp AGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGCCCTCCCCTGAAACATaGCATCCTCTCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SVHTGGLERGILFPRLCLPSPET*HPLCPQ
Trigger: CTGAGGGCAGAGAGGATGGCATGTTTCAGGGGAGGG...CAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp GGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGATCTTTTCATGGGACATaGCCTCGGGTTCCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: GHSGSKWKYLQCTYRRVGSFHGT*PRVPRS
Trigger: GGACCGCGGAACCCGAGGCCATGTCCCATGAAAAGA...TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp AGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGTCTTTTCATGGGACATaGCCTCGGGTTCCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: SVHTGGLERGILFPRLCLSFHGT*PRVPRS
Trigger: GGACCGCGGAACCCGAGGCCATGTCCCATGAAAAGA...CAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp GGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGACCGGATATCCAGGGTTaGGGGGAGGATAGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: GHSGSKWKYLQCTYRRVGPDIQG*GEDSCP
Trigger: GGGACAACTATCCTCCCCCCAACCCTGGATATCCGG...TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp TGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGTCCTGGGAAGACCTGTaGCTGTCCATAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: WPQRVQMEVSAVYIQEGWSWEDL*LSIGVG
Trigger: CCCAACCCCTATGGACAGCCACAGGTCTTCCCAGGA...CCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp GTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCCCATGTACGACAGGCTaGCGGTCAGGACCGACAGTG +
Preference number: 4 (lower is better)
Translates to: VSAVYIQEGWREASFSLGPCTTG*RSGPTV
Trigger: CACTGTCGGTCCTGACCGCCAGCCTGTCGTACATGG...GCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp GAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGAGGGGAAGTACAGCTaGCACTGCCGTGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: EVSAVYIQEGWREASFSLEGKYS*HCRARG
Trigger: GCCCCTGGCACGGCAGTGCCAGCTGTACTTCCCCTC...TAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp GGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATGTCCCTGGGGTGGGCTaGCAGACAGGGCTCATGCAA +
Preference number: 4 (lower is better)
Translates to: GSKWKYLQCTYRRVGERHVPGVG*QTGLMQ
Trigger: TTGCATGAGCCCTGTCTGCCAGCCCACCCCAGGGAC...ATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp TGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTTGCACCCTCACCTCTTaGCTCAATCCCTCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: CGHSGSKWKYLQCTYRRVCTLTS*LNPSPR
Trigger: CCGGGGAGAGGGATTGAGCCAAGAGGTGAGGGTGCA...AACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR TCA 90 bp GTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCGTTTCCATGCTGGGGTaGGTCAGGGTCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VSAVYIQEGWREASFSLGVSMLG*VRVLSW
Trigger: CCAGGACAAGACCCTGACTCACCCCAGCATGGAAAC...GCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR TCA 90 bp CTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTGGGCTCATGCAACAATaGGTAGACAGGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LWPQRVQMEVSAVYIQEGGLMQQ*VDRRWH
Trigger: GTGCCACCTCCTGTCTACTCATTGTTGCATGAGCCC...ACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR GCA 90 bp GGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAAGGGTCACCGACAGCTaGAAGGTCAGCACTAGGAAC +
Preference number: 4 (lower is better)
Translates to: GHSGSKWKYLQCTYRRVGRVTDS*KVSTRN
Trigger: GTTCCTAGTGCTGACCTTGCAGCTGTCGGTGACCCT...TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp CATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAACAGGAGGGAAGACGTaGACCCTCACCTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: HAVATAGPNGSICSVHTGTGGKT*TLTSWL
Trigger: GAGCCAAGAGGTGAGGGTGCACGTCTTCCCTCCTGT...TCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp GTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTCCTGGGAAGACCTGTaGCTGTCCATAGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: VSAVYIQEGWREASFSLGSWEDL*LSIGVG
Trigger: CCCAACCCCTATGGACAGCCACAGGTCTTCCCAGGA...GCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp TGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTAAAGGGGCCATGCTGTaGCCACAGCGGGTCCAAATG +
Preference number: 4 (lower is better)
Translates to: CGHSGSKWKYLQCTYRRVKGAML*PQRVQM
Trigger: CATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTT...AACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp CAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTGGTGGCACGGAAACGTaGCCTTGGTGCCCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: QMEVSAVYIQEGWREASFGGTET*PWCPLA
Trigger: CGCCAAGGGGCACCAAGGCCACGTTTCCGTGCCACC...AAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp GAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTACGCCCATGCATGAGGTaGAGTCGTAGCGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: EVSAVYIQEGWREASFSLRPCMR*SRSGSA
Trigger: TGCAGACCCGCTACGACTTCACCTCATGCATGGGCG...TAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp AAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACAAGAGAATGGCGAAGATaGAGAGCACCACCATGCTCA +
Preference number: 4 (lower is better)
Translates to: KGPCCGHSGSKWKYLQCTREWRR*RAPPCS
Trigger: TGAGCATGGTGGTGCTCTTCATCTTCGCCATTCTCT...TGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp ACTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGAGAGAATGGCGAAGATaGAGAGCACCACCATGCTCA +
Preference number: 4 (lower is better)
Translates to: TKGAMLWPQRVQMEVSAVREWRR*RAPPCS
Trigger: TGAGCATGGTGGTGCTCTTCATCTTCGCCATTCTCT...CACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp TGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCACGGCCATGATGACTaGCTCGGTGTTGTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CSVHTGGLERGILFPRLCHGHDD*LGVVEA
Trigger: AGCTTCTACAACACCGAGGCAGTCATCATGGCCGTG...GCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp GGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGTTGTCATAGTAGGATaGGGGACCCTCCTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: GHSGSKWKYLQCTYRRVGVVIVG*GTLLLV
Trigger: TACCAGGAGGAGGGTCCCCCATCCTACTATGACAAC...TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp TGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGTGTCATCCCAGTTGGTaGCAGGGAAGTCCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: WPQRVQMEVSAVYIQEGWCHPSW*QGSPGC
Trigger: ACAACCAGGACTTCCCTGCCACCAACTGGGATGACA...CCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp GAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTACCATGTACGACAGGCTaGCGGTCAGGACCGACAGTG +
Preference number: 4 (lower is better)
Translates to: EVSAVYIQEGWREASFSLPCTTG*RSGPTV
Trigger: CACTGTCGGTCCTGACCGCCAGCCTGTCGTACATGG...TAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp GGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGACGGTGTTGTAGAAGCTaGCGATCATCCCCACCATGT +
Preference number: 4 (lower is better)
Translates to: GHSGSKWKYLQCTYRRVGRCCRS*RSSPPC
Trigger: ACATGGTGGGGATGATCGCCAGCTTCTACAACACCG...TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp GTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCCCTCCGCAACAAAAGTaGACACAGACACCGTGGACA +
Preference number: 4 (lower is better)
Translates to: VSAVYIQEGWREASFSLGPPQQK*TQTPWT
Trigger: TGTCCACGGTGTCTGTGTTCACTTTTGTTGCGGAGG...GCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR TCA 90 bp TGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGTCACTGACAACAAATTaGGAGGAAGGCTTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: WPQRVQMEVSAVYIQEGWSLTTN*EEGFPL
Trigger: GAGGGGGAAGCCTTCCTCTCAATTTGTTGTCAGTGA...CCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp TGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGTTGTCATAGTAGGATaGGGGACCCTCCTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: CGHSGSKWKYLQCTYRRVVVIVG*GTLLLV
Trigger: TACCAGGAGGAGGGTCCCCCATCCTACTATGACAAC...AACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CCA 90 bp GTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCCGGTGTTGTAGAAGCTaGCGATCATCCCCACCATGT +
Preference number: 4 (lower is better)
Translates to: VSAVYIQEGWREASFSLGRCCRS*RSSPPC
Trigger: ACATGGTGGGGATGATCGCCAGCTTCTACAACACCG...GCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp ACTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTaGAGAGAGGCATCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TKGAMLWPQRVQMEVSAVYIQEG*REASFS
Trigger: GGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTA...CACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp AAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACACACAGCGGGTCCAAATaGAAGTATCTGCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: KGPCCGHSGSKWKYLQCTHSGSK*KYLQCT
Trigger: TGTACACTGCAGATACTTCCATTTGGACCCGCTGTG...TGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp TGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTAGAGAATGGCGAAGATaGAGAGCACCACCATGCTCA +
Preference number: 4 (lower is better)
Translates to: CGHSGSKWKYLQCTYRRVREWRR*RAPPCS
Trigger: TGAGCATGGTGGTGCTCTTCATCTTCGCCATTCTCT...AACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp ATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGACTCCGCAACAAAAGTaGACACAGACACCGTGGACA +
Preference number: 4 (lower is better)
Translates to: ICSVHTGGLERGILFPRLTPQQK*TQTPWT
Trigger: TGTCCACGGTGTCTGTGTTCACTTTTGTTGCGGAGT...CAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527194.5
CDS-3UTR CCA 90 bp CTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTACATACAGGAGGGTTaGAGAGAGGCATCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LWPQRVQMEVSAVYIQEGYIQEG*REASFS
Trigger: GGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTA...ACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
3UTR CAA 72 bp CCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTaGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PNGSICSVHTGG*ERGILFPRLCL
Trigger: CAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR TCA 90 bp CAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTGGATGCGGTTCCGGATaGAGATGCAGAGAATGGCGA +
Preference number: 4 (lower is better)
Translates to: QMEVSAVYIQEGWREASFGCGSG*RCREWR
Trigger: TCGCCATTCTCTGCATCTTCATCCGGAACCGCATCC...AAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp GAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTACACGGCCATGATGACTaGCTCGGTGTTGTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: EVSAVYIQEGWREASFSLHGHDD*LGVVEA
Trigger: AGCTTCTACAACACCGAGGCAGTCATCATGGCCGTG...TAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR GCA 90 bp GGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGACCAAATGGAAGTATCTaGAGTGTACATACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GHSGSKWKYLQCTYRRVGPNGSI*SVHTGG
Trigger: CCCTCCTGTATGTACACTGCAGATACTTCCATTTGG...TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp GAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTACGGTGTTGTAGAAGCTaGCGATCATCCCCACCATGT +
Preference number: 4 (lower is better)
Translates to: EVSAVYIQEGWREASFSLRCCRS*RSSPPC
Trigger: ACATGGTGGGGATGATCGCCAGCTTCTACAACACCG...TAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp CCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGATACATACAGGAGGGTTaGAGAGAGGCATCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PQRVQMEVSAVYIQEGWRYIQEG*REASFS
Trigger: GGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTA...TCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp CATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGACACAGCGGGTCCAAATaGAAGTATCTGCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: HAVATAGPNGSICSVHTGHSGSK*KYLQCT
Trigger: TGTACACTGCAGATACTTCCATTTGGACCCGCTGTG...TCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CCA 90 bp CCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGACACAGCGGGTCCAAATaGAAGTATCTGCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: PQRVQMEVSAVYIQEGWRHSGSK*KYLQCT
Trigger: TGTACACTGCAGATACTTCCATTTGGACCCGCTGTG...TCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS CCA 90 bp CAGCGGGTCAGAGGCGCTCCTGGGCTCGGGCCGGGGACTCACCGGTaGCCGGGCGCCGCAGGCCGGTACGCACGGTGTCCGCTGCGCGGC +
Preference number: 5 (lower is better)
Translates to: QRVRGAPGLGPGTHR*PGAAGRYARCPLRG
Trigger: GCCGCGCAGCGGACACCGTGCGTACCGGCCTGCGGCGCCCGGCCACCGGTGAGTCCCCGGCCCGAGCCCAGGAGCGCCTCTGACCCGCTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000529301.5
CDS CCA 90 bp TGCGCCGCTGCCGGCGTCTCCCGGGTGGGAGCTCAGCGCGGAGGCTaGGGTCTCGGCCGGGGACGTGTGGGGTGTGCCCGGACCCTCCCC +
Preference number: 5 (lower is better)
Translates to: CAAAGVSRVGAQRGG*GLGRGRVGCARTLP
Trigger: GGGGAGGGTCCGGGCACACCCCACACGTCCCCGGCCGAGACCCCAGCCTCCGCGCTGAGCTCCCACCCGGGAGACGCCGGCAGCGGCGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530898.1
CDS CCA 90 bp CGCCCAAGCAACCGGAGGCCTGCGCCGCTGCCGGCGTCTCCCGGGTaGGAGCTCAGCGCGGAGGCTGGGGTCTCGGCCGGGGACGTGTGG +
Preference number: 5 (lower is better)
Translates to: RPSNRRPAPLPASPG*ELSAEAGVSAGDVW
Trigger: CCACACGTCCCCGGCCGAGACCCCAGCCTCCGCGCTGAGCTCCCACCCGGGAGACGCCGGCAGCGGCGCAGGCCTCCGGTTGCTTGGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530898.1
CDS CCA 90 bp ACTCTTTTCATGGGACATGGCCTCGGGTTCCGCGGTCCGCCCCGGTaGCCGGGCGCCGCAGGCCGGTACGCACGGTGTCCGCTGCGCGGC +
Preference number: 5 (lower is better)
Translates to: TLFMGHGLGFRGPPR*PGAAGRYARCPLRG
Trigger: GCCGCGCAGCGGACACCGTGCGTACCGGCCTGCGGCGCCCGGCCACCGGGGCGGACCGCGGAACCCGAGGCCATGTCCCATGAAAAGAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395068.9
CDS-3UTR CAA 90 bp GGGGCAGGGTCCAGGCCAGCCGTGCCACCTGAGCGGGCACAGCGAGCTGGAGCTAGCACTAGGAACACCTaGCGGATGAAGGCCTGTCGG +
Preference number: 5 (lower is better)
Translates to: GAGSRPAVPPERAQRAGASTRNT*RMKACR
Trigger: CCGACAGGCCTTCATCCGCAAGGTGTTCCTAGTGCT...AGCTCCAGCTCGCTGTGCCCGCTCAGGTGGCACGGCTGGCCTGGACCCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS CCA 90 bp ATCCCCACCATGTACGACAGGCTGGCGGTCAGGACCGACTGCAGTTaGGAGACACAGGCTGACCTTGGGTGTGTGCCCCCATGCCACCCC +
Preference number: 5 (lower is better)
Translates to: IPTMYDRLAVRTDCS*ETQADLGCVPPCHP
Trigger: GGGGTGGCATGGGGGCACACACCCAAGGTCAGCCTGTGTCTCCCAACTGCAGTCGGTCCTGACCGCCAGCCTGTCGTACATGGTGGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525513.1
ENST00000533377.1
ENST00000534791.5
CDS TCA 90 bp CCACAGCCCCCACCGCCTTGGAGATGCCCCTACCCACCTTGCGGATaGAGGCCTGTCGGATGCTCTTGTCATCCCAGTTGGTGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: PQPPPPWRCPYPPCG*RPVGCSCHPSWWQG
Trigger: TCCCTGCCACCAACTGGGATGACAAGAGCATCCGACAGGCCTTCATCCGCAAGGTGGGTAGGGGCATCTCCAAGGCGGTGGGGGCTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525513.1
CDS GCA 90 bp GCGATCATCCCCACCATGTACGACAGGCTGGCGGTCAGGACCGACTaGAGTTGGGAGACACAGGCTGACCTTGGGTGTGTGCCCCCATGC +
Preference number: 5 (lower is better)
Translates to: AIIPTMYDRLAVRTD*SWETQADLGCVPPC
Trigger: GCATGGGGGCACACACCCAAGGTCAGCCTGTGTCTCCCAACTGCAGTCGGTCCTGACCGCCAGCCTGTCGTACATGGTGGGGATGATCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525513.1
ENST00000533377.1
ENST00000534791.5
CDS TCA 90 bp GTAGGATGGGGGACCCTCCTCCTGGTAGTTTCCATGCTGGGGTGCTaGGAAGCAGACAGGCTGGGTCAGCGCCACTCACAAGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: VGWGTLLLVVSMLGC*EADRLGQRHSQAPP
Trigger: GGGAGGTGCTTGTGAGTGGCGCTGACCCAGCCTGTCTGCTTCTCAGCACCCCAGCATGGAAACTACCAGGAGGAGGGTCCCCCATCCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531992.1
CDS-3UTR CAA 90 bp ACTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGCACGGAAACGTGGCCTaGGTGCCCCTTGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: TKGAMLWPQRVQMEVSAVHGNVA*VPLGGG
Trigger: GCCCCCGCCAAGGGGCACCAAGGCCACGTTTCCGTG...CACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS GCA 90 bp GACAGGCTGGCGGTCAGGACCGACAGTGCAACAAGGTTCCAGGGGTaGTTTCGCCGGAAGTCCCCACAACAGCTGAGGACGATGAGAGAG +
Preference number: 5 (lower is better)
Translates to: DRLAVRTDSATRFQG*FRRKSPQQLRTMRE
Trigger: CTCTCTCATCGTCCTCAGCTGTTGTGGGGACTTCCGGCGAAAGCACCCCTGGAACCTTGTTGCACTGTCGGTCCTGACCGCCAGCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000529301.5
CDS-3UTR CAA 90 bp GCAACAATGAGTAGACAGGAGGTGGCACGGAAACGTGGCCTTGGTGCCCCTTGGGAGCTCGGCTACTCCTaGGCGCGGCCAATGATGGTG +
Preference number: 5 (lower is better)
Translates to: ATMSRQEVARKRGLGAPWELGYS*ARPMMV
Trigger: CACCATCATTGGCCGCGCCAAGGAGTAGCCGAGCTC...CCAAGGGGCACCAAGGCCACGTTTCCGTGCCACCTCCTGTCTACTCATTGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CAA 90 bp GGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGACACGGAAACGTGGCCTaGGTGCCCCTTGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: GHSGSKWKYLQCTYRRVGHGNVA*VPLGGG
Trigger: GCCCCCGCCAAGGGGCACCAAGGCCACGTTTCCGTG...TCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp TGGGGTGGGCTGGCAGACAGGGCTCATGCAACAATGAGTAGACAGGAGGTGGCAGTGCACCCTCACCTCTaGGCTCAATCCCTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: WGGLADRAHATMSRQEVAVHPHL*AQSLSP
Trigger: CGGGGAGAGGGATTGAGCCAAGAGGTGAGGGTGCAC...TGCCACCTCCTGTCTACTCATTGTTGCATGAGCCCTGTCTGCCAGCCCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS CCA 90 bp CGGTGTTGTAGAAGCTGGCGATCATCCCCACCATGTACGACAGGCTaGCGGTCAGGACCGACTGCAGTTGGGAGACACAGGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: RCCRSWRSSPPCTTG*RSGPTAVGRHRLTL
Trigger: CAAGGTCAGCCTGTGTCTCCCAACTGCAGTCGGTCCTGACCGCCAGCCTGTCGTACATGGTGGGGATGATCGCCAGCTTCTACAACACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525513.1
ENST00000533377.1
ENST00000534791.5
CDS GCA 90 bp GACGGTGAAGCAGACGGCTGTGGTGATGCCCACGGCCATGATGACTaGCTCGGTGTTGTAGAAGCTGGCGATCATCCCCACCATGTACGA +
Preference number: 5 (lower is better)
Translates to: DGEADGCGDAHGHDD*LGVVEAGDHPHHVR
Trigger: TCGTACATGGTGGGGATGATCGCCAGCTTCTACAACACCGAGGCAGTCATCATGGCCGTGGGCATCACCACAGCCGTCTGCTTCACCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000525513.1
ENST00000527194.5
ENST00000529301.5
ENST00000533044.5
ENST00000533377.1
ENST00000534791.5
CDS GCA 90 bp AGGTTCAGCGCAGCAAACACATACTCTTCTGGGCTCAGGGACAGCTaGTTGTTCCCCAGTAGCAGCTGGGTGTCCACTGCGAGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: RFSAANTYSSGLRDS*LFPSSSWVSTARKQ
Trigger: CTGCTTCCTCGCAGTGGACACCCAGCTGCTACTGGGGAACAAGCAGCTGTCCCTGAGCCCAGAAGAGTATGTGTTTGCTGCGCTGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
ENST00000533044.5
ENST00000533377.1
ENST00000534791.5
CDS GCA 90 bp GCAACAAAAGTGAACACAGACACCGTGGACAGGGTCACCGACAGCTaGAAGGTCAGCACTAGGAACACCTGGGGAAGGAGCCGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: ATKVNTDTVDRVTDS*KVSTRNTWGRSRSE
Trigger: CTCTGAGCGGCTCCTTCCCCAGGTGTTCCTAGTGCTGACCTTGCAGCTGTCGGTGACCCTGTCCACGGTGTCTGTGTTCACTTTTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525513.1
CDS-3UTR CAA 90 bp GCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGGAGCTCGGCTACTCCTaGGCGCGGCCAATGATGGTG +
Preference number: 5 (lower is better)
Translates to: ATAGPNGSICSVHTGGLEELGYS*ARPMMV
Trigger: CACCATCATTGGCCGCGCCAAGGAGTAGCCGAGCTC...CTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp TGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGGTGCACCCTCACCTCTaGGCTCAATCCCTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: WPQRVQMEVSAVYIQEGWVHPHL*AQSLSP
Trigger: CGGGGAGAGGGATTGAGCCAAGAGGTGAGGGTGCAC...CCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CAA 90 bp TGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGCTCAGGGACAGCTGCTaGTTCCCCAGTAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: WPQRVQMEVSAVYIQEGWLRDSC*FPSSSW
Trigger: CCAGCTGCTACTGGGGAACAAGCAGCTGTCCCTGAG...CCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp ATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGGAGCTCGGCTACTCCTaGGCGCGGCCAATGATGGTG +
Preference number: 5 (lower is better)
Translates to: ICSVHTGGLERGILFPRLELGYS*ARPMMV
Trigger: CACCATCATTGGCCGCGCCAAGGAGTAGCCGAGCTC...CAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp CAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTCACGGAAACGTGGCCTaGGTGCCCCTTGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: QMEVSAVYIQEGWREASFHGNVA*VPLGGG
Trigger: GCCCCCGCCAAGGGGCACCAAGGCCACGTTTCCGTG...AAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS TCA 90 bp TCCAGACATTCTCCCGGACAAAGCCCTTCACCTCCGCAACAAAAGTaGACACAGACACCGTGGACAGGGTCACCGACAGCTGCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: SRHSPGQSPSPPQQK*TQTPWTGSPTAARS
Trigger: TGACCTTGCAGCTGTCGGTGACCCTGTCCACGGTGTCTGTGTTCACTTTTGTTGCGGAGGTGAAGGGCTTTGTCCGGGAGAATGTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000525513.1
ENST00000529301.5
ENST00000534791.5
CDS-3UTR CAA 90 bp TGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGGCCTGTCGGATGCTCTaGTCATCCCAGTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: WPQRVQMEVSAVYIQEGWACRML*SSQLVA
Trigger: TGCCACCAACTGGGATGACAAGAGCATCCGACAGGC...CCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp CTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTAGCACTAGGAACACCTaGCGGATGAAGGCCTGTCGG +
Preference number: 5 (lower is better)
Translates to: LWPQRVQMEVSAVYIQEGSTRNT*RMKACR
Trigger: CCGACAGGCCTTCATCCGCAAGGTGTTCCTAGTGCT...ACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp CATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGACTCAGGGACAGCTGCTaGTTCCCCAGTAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HAVATAGPNGSICSVHTGLRDSC*FPSSSW
Trigger: CCAGCTGCTACTGGGGAACAAGCAGCTGTCCCTGAG...TCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp GGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCTCAGGGACAGCTGCTaGTTCCCCAGTAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GSKWKYLQCTYRRVGERHLRDSC*FPSSSW
Trigger: CCAGCTGCTACTGGGGAACAAGCAGCTGTCCCTGAG...ATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp GGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATAGCACTAGGAACACCTaGCGGATGAAGGCCTGTCGG +
Preference number: 5 (lower is better)
Translates to: GSKWKYLQCTYRRVGERHSTRNT*RMKACR
Trigger: CCGACAGGCCTTCATCCGCAAGGTGTTCCTAGTGCT...ATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp GAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGCCTGTCGGATGCTCTaGTCATCCCAGTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: EVSAVYIQEGWREASFSLACRML*SSQLVA
Trigger: TGCCACCAACTGGGATGACAAGAGCATCCGACAGGC...TAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp GCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGGTACATACAGGAGGGTaGGAGAGAGGCATCCTTTTC +
Preference number: 5 (lower is better)
Translates to: ATAGPNGSICSVHTGGLEVHTGG*ERGILF
Trigger: GAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTAC...CTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp TGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCGTACATACAGGAGGGTaGGAGAGAGGCATCCTTTTC +
Preference number: 5 (lower is better)
Translates to: CSVHTGGLERGILFPRLCVHTGG*ERGILF
Trigger: GAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTAC...GCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp TGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGTACATACAGGAGGGTaGGAGAGAGGCATCCTTTTC +
Preference number: 5 (lower is better)
Translates to: CGHSGSKWKYLQCTYRRVVHTGG*ERGILF
Trigger: GAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTAC...AACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp ATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTAGGCTGTGCCTGGGGACAAATGTACAGGAAGATGTaGATGATGTCTGTGTACAGG +
Preference number: 5 (lower is better)
Translates to: IQEGWREASFSLGCAWGQMYRKM*MMSVYR
Trigger: CCTGTACACAGACATCATCAACATCTTCCTGTACAT...TTGTCCCCAGGCACAGCCTAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp CCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGATTCACTGACAACAAATaGAGAGGAAGGCTTCCCCCT +
Preference number: 5 (lower is better)
Translates to: PQRVQMEVSAVYIQEGWRFTDNK*RGRLPP
Trigger: AGGGGGAAGCCTTCCTCTCAATTTGTTGTCAGTGAA...TCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS-3UTR CAA 90 bp CTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTATGTACAGGAAGATGTaGATGATGTCTGTGTACAGG +
Preference number: 5 (lower is better)
Translates to: LWPQRVQMEVSAVYIQEGMYRKM*MMSVYR
Trigger: CCTGTACACAGACATCATCAACATCTTCCTGTACAT...ACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp CCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAATGTACAGGAAGATGTaGATGATGTCTGTGTACAGG +
Preference number: 5 (lower is better)
Translates to: PQRVQMEVSAVYIQEGWRMYRKM*MMSVYR
Trigger: CCTGTACACAGACATCATCAACATCTTCCTGTACAT...TCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
CDS-3UTR CAA 90 bp GAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATCCTTTTCCCTATTCACTGACAACAAATaGAGAGGAAGGCTTCCCCCT +
Preference number: 5 (lower is better)
Translates to: EVSAVYIQEGWREASFSLFTDNK*RGRLPP
Trigger: AGGGGGAAGCCTTCCTCTCAATTTGTTGTCAGTGAA...TAGGGAAAAGGATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000395068.9
CDS CCA 72 bp AGAGGCGCTCCTGGGCTCGGGCCGGGGACTCACCGGTaGCCGGGCGCCGCAGGCCGGTACGCACGGTGTCCG +
Preference number: 6 (lower is better)
Translates to: RGAPGLGPGTHR*PGAAGRYARCP
Trigger: CGGACACCGTGCGTACCGGCCTGCGGCGCCCGGCCACCGGTGAGTCCCCGGCCCGAGCCCAGGAGCGCCTCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313269.5
ENST00000529301.5
CDS CCA 72 bp GCCGGCGTCTCCCGGGTGGGAGCTCAGCGCGGAGGCTaGGGTCTCGGCCGGGGACGTGTGGGGTGTGCCCGG +
Preference number: 6 (lower is better)
Translates to: AGVSRVGAQRGG*GLGRGRVGCAR
Trigger: CCGGGCACACCCCACACGTCCCCGGCCGAGACCCCAGCCTCCGCGCTGAGCTCCCACCCGGGAGACGCCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530898.1
CDS CCA 72 bp AACCGGAGGCCTGCGCCGCTGCCGGCGTCTCCCGGGTaGGAGCTCAGCGCGGAGGCTGGGGTCTCGGCCGGG +
Preference number: 6 (lower is better)
Translates to: NRRPAPLPASPG*ELSAEAGVSAG
Trigger: CCCGGCCGAGACCCCAGCCTCCGCGCTGAGCTCCCACCCGGGAGACGCCGGCAGCGGCGCAGGCCTCCGGTT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530898.1
CDS CCA 72 bp ATGGGACATGGCCTCGGGTTCCGCGGTCCGCCCCGGTaGCCGGGCGCCGCAGGCCGGTACGCACGGTGTCCG +
Preference number: 6 (lower is better)
Translates to: MGHGLGFRGPPR*PGAAGRYARCP
Trigger: CGGACACCGTGCGTACCGGCCTGCGGCGCCCGGCCACCGGGGCGGACCGCGGAACCCGAGGCCATGTCCCAT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395068.9
CDS GCA 72 bp CTCGGGTTCCGCGGTCCGCCCAAGCAACCGGAGGCCTaGGCCGCTGCCGGCGTCTCCCGGGTGGGAGCTCAG +
Preference number: 6 (lower is better)
Translates to: LGFRGPPKQPEA*AAAGVSRVGAQ
Trigger: CTGAGCTCCCACCCGGGAGACGCCGGCAGCGGCGCAGGCCTCCGGTTGCTTGGGCGGACCGCGGAACCCGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530898.1
CDS CCA 72 bp GAACACCTGGGGAAGGAGCCGCTCAGAGTCATCCGCTaGGAGCCACAGCCCCCACCGCCTTGGAGATGCCCC +
Preference number: 6 (lower is better)
Translates to: EHLGKEPLRVIR*EPQPPPPWRCP
Trigger: GGGGCATCTCCAAGGCGGTGGGGGCTGTGGCTCCCAGCGGATGACTCTGAGCGGCTCCTTCCCCAGGTGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525513.1
CDS CAA 72 bp CAGAGTCATCCGCTGGGAGCCACAGCCCCCACCGCCTaGGAGATGCCCCTACCCACCTTGCGGATGAAGGCC +
Preference number: 6 (lower is better)
Translates to: QSHPLGATAPTA*EMPLPTLRMKA
Trigger: GGCCTTCATCCGCAAGGTGGGTAGGGGCATCTCCAAGGCGGTGGGGGCTGTGGCTCCCAGCGGATGACTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525513.1
CDS CAA 90 bp CTGGGAGCCACAGCCCCCACCGCCTTGGAGATGCCCCTACCCACCTaGCGGATGAAGGCCTGTCGGATGCTCTTGTCATCCCAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: LGATAPTALEMPLPT*RMKACRMLLSSQLV
Trigger: CACCAACTGGGATGACAAGAGCATCCGACAGGCCTTCATCCGCAAGGTGGGTAGGGGCATCTCCAAGGCGGTGGGGGCTGTGGCTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525513.1
CDS GCA 72 bp CCCACCATGTACGACAGGCTGGCGGTCAGGACCGACTaGAGTTGGGAGACACAGGCTGACCTTGGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: PTMYDRLAVRTD*SWETQADLGCV
Trigger: CACACACCCAAGGTCAGCCTGTGTCTCCCAACTGCAGTCGGTCCTGACCGCCAGCCTGTCGTACATGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525513.1
ENST00000533377.1
ENST00000534791.5
CDS CCA 72 bp GTCACCGACAGCTGCAAGGTCAGCACTAGGAACACCTaGGGAAGGAGCCGCTCAGAGTCATCCGCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: VTDSCKVSTRNT*GRSRSESSAGS
Trigger: GCTCCCAGCGGATGACTCTGAGCGGCTCCTTCCCCAGGTGTTCCTAGTGCTGACCTTGCAGCTGTCGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525513.1
CDS CAA 72 bp CTGAGCGGGCACAGCGAGCTGGAGCTCGGCTACTCCTaGGCGCGGCCAATGATGGTGAGGATGTACAGGAAG +
Preference number: 6 (lower is better)
Translates to: LSGHSELELGYS*ARPMMVRMYRK
Trigger: CTTCCTGTACATCCTCACCATCATTGGCCGCGCCAAGGAGTAGCCGAGCTCCAGCTCGCTGTGCCCGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
ENST00000533377.1
CDS CAA 90 bp CCGTGCCACCTGAGCGGGCACAGCGAGCTGGAGCTCGGCTACTCCTaGGCGCGGCCAATGATGGTGAGGATGTACAGGAAGATGTTGATG +
Preference number: 6 (lower is better)
Translates to: PCHLSGHSELELGYS*ARPMMVRMYRKMLM
Trigger: CATCAACATCTTCCTGTACATCCTCACCATCATTGGCCGCGCCAAGGAGTAGCCGAGCTCCAGCTCGCTGTGCCCGCTCAGGTGGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
ENST00000533377.1
CDS TCA 72 bp CCACCGCCTTGGAGATGCCCCTACCCACCTTGCGGATaGAGGCCTGTCGGATGCTCTTGTCATCCCAGTTGG +
Preference number: 6 (lower is better)
Translates to: PPPWRCPYPPCG*RPVGCSCHPSW
Trigger: CCAACTGGGATGACAAGAGCATCCGACAGGCCTTCATCCGCAAGGTGGGTAGGGGCATCTCCAAGGCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525513.1
CDS TCA 72 bp GGGACCCTCCTCCTGGTAGTTTCCATGCTGGGGTGCTaGGAAGCAGACAGGCTGGGTCAGCGCCACTCACAA +
Preference number: 6 (lower is better)
Translates to: GTLLLVVSMLGC*EADRLGQRHSQ
Trigger: TTGTGAGTGGCGCTGACCCAGCCTGTCTGCTTCTCAGCACCCCAGCATGGAAACTACCAGGAGGAGGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531992.1
CDS GCA 72 bp GCAGACGGCTGTGGTGATGCCCACGGCCATGATGACTaGCTCGGTGTTGTAGAAGCTGGCGATCATCCCCAC +
Preference number: 6 (lower is better)
Translates to: ADGCGDAHGHDD*LGVVEAGDHPH
Trigger: GTGGGGATGATCGCCAGCTTCTACAACACCGAGGCAGTCATCATGGCCGTGGGCATCACCACAGCCGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000525513.1
ENST00000527194.5
ENST00000529301.5
ENST00000533044.5
ENST00000533377.1
ENST00000534791.5
CDS CCA 72 bp AGAAGCTGGCGATCATCCCCACCATGTACGACAGGCTaGCGGTCAGGACCGACTGCAGTTGGGAGACACAGG +
Preference number: 6 (lower is better)
Translates to: RSWRSSPPCTTG*RSGPTAVGRHR
Trigger: CCTGTGTCTCCCAACTGCAGTCGGTCCTGACCGCCAGCCTGTCGTACATGGTGGGGATGATCGCCAGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525513.1
ENST00000533377.1
ENST00000534791.5
CDS TCA 72 bp ACAGGCTGGCGGTCAGGACCGACTCCGCAACAAAAGTaGACACAGACACCGTGGACAGGGTCACCGACAGCT +
Preference number: 6 (lower is better)
Translates to: TGWRSGPTPQQK*TQTPWTGSPTA
Trigger: AGCTGTCGGTGACCCTGTCCACGGTGTCTGTGTTCACTTTTGTTGCGGAGTCGGTCCTGACCGCCAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527194.5
CDS GCA 72 bp GTGAACACAGACACCGTGGACAGGGTCACCGACAGCTaGAAGGTCAGCACTAGGAACACCTGGGGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: VNTDTVDRVTDS*KVSTRNTWGRS
Trigger: GCTCCTTCCCCAGGTGTTCCTAGTGCTGACCTTGCAGCTGTCGGTGACCCTGTCCACGGTGTCTGTGTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525513.1
CDS CCA 72 bp AGAAGCTGGCGATCATCCCCACCATGTACGACAGGCTaGCGGTCAGGACCGACAGTGCAACAAGGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: RSWRSSPPCTTG*RSGPTVQQGSR
Trigger: CCTGGAACCTTGTTGCACTGTCGGTCCTGACCGCCAGCCTGTCGTACATGGTGGGGATGATCGCCAGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000529301.5
CDS CAA 90 bp TTCAGCGCAGCAAACACATACTCTTCTGGGCTCAGGGACAGCTGCTaGTTCCCCAGTAGCAGCTGGGTGTCCACTGCGAGGAAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: FSAANTYSSGLRDSC*FPSSSWVSTARKQV
Trigger: CACCTGCTTCCTCGCAGTGGACACCCAGCTGCTACTGGGGAACAAGCAGCTGTCCCTGAGCCCAGAAGAGTATGTGTTTGCTGCGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
ENST00000533044.5
ENST00000533377.1
ENST00000534791.5
CDS GCA 72 bp GCAGCAAACACATACTCTTCTGGGCTCAGGGACAGCTaGTTGTTCCCCAGTAGCAGCTGGGTGTCCACTGCG +
Preference number: 6 (lower is better)
Translates to: AANTYSSGLRDS*LFPSSSWVSTA
Trigger: CGCAGTGGACACCCAGCTGCTACTGGGGAACAAGCAGCTGTCCCTGAGCCCAGAAGAGTATGTGTTTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
ENST00000533044.5
ENST00000533377.1
ENST00000534791.5
CDS CCA 72 bp GTTGGTGGCAGGGAAGTCCTGGTTGTCATAGTAGGATaGGGGACCCTCCTCCTGGTAGTTTCCATGCTGGGG +
Preference number: 6 (lower is better)
Translates to: VGGREVLVVIVG*GTLLLVVSMLG
Trigger: CCCCAGCATGGAAACTACCAGGAGGAGGGTCCCCCATCCTACTATGACAACCAGGACTTCCCTGCCACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000525513.1
ENST00000529301.5
ENST00000531992.1
ENST00000533044.5
ENST00000534791.5
CDS CAA 72 bp CTACCCACCTTGCGGATGAAGGCCTGTCGGATGCTCTaGTCATCCCAGTTGGTGGCAGGGAAGTCCTGGTTG +
Preference number: 6 (lower is better)
Translates to: LPTLRMKACRML*SSQLVAGKSWL
Trigger: CAACCAGGACTTCCCTGCCACCAACTGGGATGACAAGAGCATCCGACAGGCCTTCATCCGCAAGGTGGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525513.1
CDS CAA 72 bp AGGACCGACTTGCGGATGAAGGCCTGTCGGATGCTCTaGTCATCCCAGTTGGTGGCAGGGAAGTCCTGGTTG +
Preference number: 6 (lower is better)
Translates to: RTDLRMKACRML*SSQLVAGKSWL
Trigger: CAACCAGGACTTCCCTGCCACCAACTGGGATGACAAGAGCATCCGACAGGCCTTCATCCGCAAGTCGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533044.5
CDS TCA 72 bp TCTCCCGGACAAAGCCCTTCACCTCCGCAACAAAAGTaGACACAGACACCGTGGACAGGGTCACCGACAGCT +
Preference number: 6 (lower is better)
Translates to: SPGQSPSPPQQK*TQTPWTGSPTA
Trigger: AGCTGTCGGTGACCCTGTCCACGGTGTCTGTGTTCACTTTTGTTGCGGAGGTGAAGGGCTTTGTCCGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000525513.1
ENST00000529301.5
ENST00000534791.5
CDS GCA 72 bp GTGAACACAGACACCGTGGACAGGGTCACCGACAGCTaGAAGGTCAGCACTAGGAACACCTTGCGGATGAAG +
Preference number: 6 (lower is better)
Translates to: VNTDTVDRVTDS*KVSTRNTLRMK
Trigger: CTTCATCCGCAAGGTGTTCCTAGTGCTGACCTTGCAGCTGTCGGTGACCCTGTCCACGGTGTCTGTGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
ENST00000529301.5
ENST00000531992.1
ENST00000534791.5
CDS CAA 72 bp AGGAACACCTTGCGGATGAAGGCCTGTCGGATGCTCTaGTCATCCCAGTTGGTGGCAGGGAAGTCCTGGTTG +
Preference number: 6 (lower is better)
Translates to: RNTLRMKACRML*SSQLVAGKSWL
Trigger: CAACCAGGACTTCCCTGCCACCAACTGGGATGACAAGAGCATCCGACAGGCCTTCATCCGCAAGGTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000529301.5
ENST00000531992.1
ENST00000534791.5
CDS CAA 72 bp GCGCGGCCAATGATGGTGAGGATGTACAGGAAGATGTaGATGATGTCTGTGTACAGGTTCAGCGCAGCAAAC +
Preference number: 6 (lower is better)
Translates to: ARPMMVRMYRKM*MMSVYRFSAAN
Trigger: GTTTGCTGCGCTGAACCTGTACACAGACATCATCAACATCTTCCTGTACATCCTCACCATCATTGGCCGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313269.5
ENST00000395068.9
ENST00000527194.5
ENST00000533377.1
ENST00000534791.5