RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRIN3A (Homo sapiens)

Ensembl gene IDs: ENSG00000198785

Ensembl transcript IDs: ENST00000361820.6, ENST00000479772.1

Found 488 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGTAATGTGGATTGAGGTACACCTGTACATCAGCCTTCCGGGCTaGACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCC +
Preference number: 1 (lower is better)
Translates to: AVMWIEVHLYISLPG*TEVQGHAEHGGRVS
Trigger: GGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCACATTACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR GCA 90 bp ATTTCAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTaGTGCTTGCTGCATCCTGGCCAGTGTTTTGGCCAGGTAGTTCCT +
Preference number: 1 (lower is better)
Translates to: ISSNVDGSKPAVSPC*CLLHPGQCFGQVVP
Trigger: AGGAACTACCTGGCCAAAACACTGGCCAGGATGCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR GCA 90 bp GAGAAGTCTGTTACCCAGATGATAAGGTCTGTTCTGCTTGGCACTTaGTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGCTCT +
Preference number: 1 (lower is better)
Translates to: EKSVTQMIRSVLLGT*SAYHFSGWKGSSSS
Trigger: AGAGCTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGAACAGACCTTATCATCTGGGTAACAGACTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 90 bp GCAGGGCAGATTCCTGAATGGTCGAAGCTTATAGTGTTCCCGGGCTaGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGAT +
Preference number: 1 (lower is better)
Translates to: AGQIPEWSKLIVFPG*RFWDFYAKRWVTAD
Trigger: ATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCCCGGGAACACTATAAGCTTCGACCATTCAGGAATCTGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 90 bp TTTCTGAGCTCACCTCTAGACCTCCACCCCCAACCCCATAATCTCTaGAGAAGGGTCTTGGCAATCCGCACTCTGATGAGTTCTCTACTA +
Preference number: 1 (lower is better)
Translates to: FLSSPLDLHPQPHNL*RRVLAIRTLMSSLL
Trigger: TAGTAGAGAACTCATCAGAGTGCGGATTGCCAAGACCCTTCTCCAGAGATTATGGGGTTGGGGGTGGAGGTCTAGAGGTGAGCTCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 90 bp AGGAGCGTGCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTaGCATGTGATCACCACTGCTCAGAATGCCTCACTAGAGAAGCTT +
Preference number: 1 (lower is better)
Translates to: RSVHWSSTLWIGRAI*HVITTAQNASLEKL
Trigger: AAGCTTCTCTAGTGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGCACGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 90 bp TTCCTCCAAAGATGTTTGAGGAGCGTGCATTGGTCATCTACTTTGTaGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAAT +
Preference number: 1 (lower is better)
Translates to: FLQRCLRSVHWSSTL*IGRAIWHVITTAQN
Trigger: ATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGCACGCTCCTCAAACATCTTTGGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR TCA 90 bp CCATATTCCTTTCCCTTGCTGCCTAAACTTGATATGCTGAGAAAGTaGCACCTAAGCAGAGGGGAGGTTACTTGTATCAGTCTTTGGGGG +
Preference number: 1 (lower is better)
Translates to: PYSFPLLPKLDMLRK*HLSRGEVTCISLWG
Trigger: CCCCCAAAGACTGATACAAGTAACCTCCCCTCTGCTTAGGTGTCACTTTCTCAGCATATCAAGTTTAGGCAGCAAGGGAAAGGAATATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 90 bp ACCAGAAATATTACTGTGGCACCTGGTGAAAAGGTTAACGGCAGCTaGGGTTATCTGGTTATTCACAGATCTCTCGCACAGAGCTTACTC +
Preference number: 1 (lower is better)
Translates to: TRNITVAPGEKVNGS*GYLVIHRSLAQSLL
Trigger: GAGTAAGCTCTGTGCGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAGGTGCCACAGTAATATTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 90 bp ATTCCTGAATGGTCGAAGCTTATAGTGTTCCCGGGCTGGAGGTTTTaGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAAATG +
Preference number: 1 (lower is better)
Translates to: IPEWSKLIVFPGWRF*DFYAKRWVTADLKM
Trigger: CATTTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCCCGGGAACACTATAAGCTTCGACCATTCAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR TCA 90 bp GGGGTTATCTGGTTATTCACAGATCTCTCGCACAGAGCTTACTCCTaGCTAAGATTCTTGCTAGAAAAACACTCCTACCCTGGAGACCTA +
Preference number: 1 (lower is better)
Translates to: GVIWLFTDLSHRAYS*LRFLLEKHSYPGDL
Trigger: TAGGTCTCCAGGGTAGGAGTGTTTTTCTAGCAAGAATCTTAGTCAGGAGTAAGCTCTGTGCGAGAGATCTGTGAATAACCAGATAACCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR TCA 90 bp CATAGCTCCTCAGAGATGAGTGGGTGTGAGGATGGGGGATTGACTTaGTTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAAT +
Preference number: 1 (lower is better)
Translates to: HSSSEMSGCEDGGLT*FSIQICKVQGRFLN
Trigger: ATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAATCAAGTCAATCCCCCATCCTCACACCCACTCATCTCTGAGGAGCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR GCA 90 bp CAAATTGCCTTTCTGGCCCAGAGCTTTTGTTCTGAAAGCATGGTATaGATTTTTAATGCCTCTGCTGCCTGTCTTCTGTTTCCGCTTACC +
Preference number: 1 (lower is better)
Translates to: QIAFLAQSFCSESMV*IFNASAACLLFPLT
Trigger: GGTAAGCGGAAACAGAAGACAGGCAGCAGAGGCATTAAAAATGCATACCATGCTTTCAGAACAAAAGCTCTGGGCCAGAAAGGCAATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 90 bp TTAGCCAAATTGCCTTTCTGGCCCAGAGCTTTTGTTCTGAAAGCATaGTATGCATTTTTAATGCCTCTGCTGCCTGTCTTCTGTTTCCGC +
Preference number: 1 (lower is better)
Translates to: LAKLPFWPRAFVLKA*YAFLMPLLPVFCFR
Trigger: GCGGAAACAGAAGACAGGCAGCAGAGGCATTAAAAATGCATACCATGCTTTCAGAACAAAAGCTCTGGGCCAGAAAGGCAATTTGGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 90 bp TTTGGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTaGGGCCTTGATTATTCTTATTTACACGAACCAGGTAGCTATATC +
Preference number: 1 (lower is better)
Translates to: FGRFPFLLHLEAYTL*GLDYSYLHEPGSYI
Trigger: GATATAGCTACCTGGTTCGTGTAAATAAGAATAATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 90 bp CTGAGGACATCTAATCCATCCATGTGGTTGTACAAGAAAAGTGGCTaGAGCAAAACAGCCCGTTCACTTCATGCTCACAAGACAGCATTT +
Preference number: 1 (lower is better)
Translates to: LRTSNPSMWLYKKSG*SKTARSLHAHKTAF
Trigger: AAATGCTGTCTTGTGAGCATGAAGTGAACGGGCTGTTTTGCTCCAGCCACTTTTCTTGTACAACCACATGGATGGATTAGATGTCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR GCA 90 bp TTCTTTCCCCTTTATTCTTTACCCACACCAAGGAAGTGCTTAACTTaGTCTAAGGCTCTAACAGACACAGCACCAACACTGAGAAGTCTG +
Preference number: 1 (lower is better)
Translates to: FFPLYSLPTPRKCLT*SKALTDTAPTLRSL
Trigger: CAGACTTCTCAGTGTTGGTGCTGTGTCTGTTAGAGCCTTAGAGCAAGTTAAGCACTTCCTTGGTGTGGGTAAAGAATAAAGGGGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 90 bp CTTTTCACAGTAGGGTGTAAGCATGCTCTTACTAAACAGTCAGGATaGAGTCAGAGATCCAGAACCTTCTCAAAAACATGGCTCTTGCCT +
Preference number: 1 (lower is better)
Translates to: LFTVGCKHALTKQSG*SQRSRTFSKTWLLP
Trigger: AGGCAAGAGCCATGTTTTTGAGAAGGTTCTGGATCTCTGACTCCATCCTGACTGTTTAGTAAGAGCATGCTTACACCCTACTGTGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 90 bp TTGATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATaGTCGAAGCTTATAGTGTTCCCGGGCTGGAGGTTTTGGGATTTC +
Preference number: 1 (lower is better)
Translates to: LIFYTDMQSAGQIPE*SKLIVFPGWRFWDF
Trigger: GAAATCCCAAAACCTCCAGCCCGGGAACACTATAAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR GCA 90 bp CAGGATGGAGTCAGAGATCCAGAACCTTCTCAAAAACATGGCTCTTaGCTGGTCCAATCAATCCTTGACGTTTATGATACTAATGAGTTA +
Preference number: 1 (lower is better)
Translates to: QDGVRDPEPSQKHGS*LVQSILDVYDTNEL
Trigger: TAACTCATTAGTATCATAAACGTCAAGGATTGATTGGACCAGGCAAGAGCCATGTTTTTGAGAAGGTTCTGGATCTCTGACTCCATCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR TCA 90 bp ATCCGCACTCTGATGAGTTCTCTACTAGATGACTCTTATCTACATTaGCATTTGAGAACTGACCCATATTCCTTTCCCTTGCTGCCTAAA +
Preference number: 1 (lower is better)
Translates to: IRTLMSSLLDDSYLH*HLRTDPYSFPLLPK
Trigger: TTTAGGCAGCAAGGGAAAGGAATATGGGTCAGTTCTCAAATGTCAATGTAGATAAGAGTCATCTAGTAGAGAACTCATCAGAGTGCGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCTTCTCCTCCTGCCTGTaGGCAGCCAAACTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSFSSCL*AAKLPE
Trigger: TTCTGGAAGTTTGGCTGCCCACAGGCAGGAGGAGAA...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCACCTACTTCTGGGCCTaGGGTGAGAACGTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCTYFWA*GENVRG
Trigger: TCCCCTCACGTTCTCACCCCAGGCCCAGAAGTAGGT...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCAAATGGCCTAGTGTGTaGTGTGTAGAACATTTCACC +
Preference number: 2 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSKWPSV*CVEHFT
Trigger: GGTGAAATGTTCTACACACCACACACTAGGCCATTT...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCAGGGGCACGCAGAGCATaGTGGCAGAGTCTCCAGCAT +
Preference number: 2 (lower is better)
Translates to: LWIGRAIWHVITTAQNASGARRA*WQSLQH
Trigger: ATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCC...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp TGGATTGAGGTACACCTGTACATCAGCCTTCCGGGCTGCACAGAGGTTCAGGGGGCGATGGGTGACTGCTaGTCTGAAAATGGCCTAGTG +
Preference number: 2 (lower is better)
Translates to: WIEVHLYISLPGCTEVQGAMGDC*SENGLV
Trigger: CACTAGGCCATTTTCAGATCAGCAGTCACCCATCGC...CCCCTGAACCTCTGTGCAGCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTATAGCTCCTCAGAGATaGGTGGGTGTGAGGATGGGG +
Preference number: 2 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCIAPQR*VGVRMG
Trigger: CCCCATCCTCACACCCACTCATCTCTGAGGAGCTAT...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCCTGTTTCCTCATTATTaGACTGTTTCATCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSLFPHY*TVSSVE
Trigger: CTCCACAGATGAAACAGTTCAATAATGAGGAAACAG...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTGGGCGATCTGGCATGTaGTCACCACTGCTCAGAATG +
Preference number: 2 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCGRSGM*SPLLRM
Trigger: CATTCTGAGCAGTGGTGATCACATGCCAGATCGCCC...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCATAGGCAGGGCGATCTaGCATGTGATCACCACTGCT +
Preference number: 2 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCIGRAI*HVITTA
Trigger: AGCAGTGGTGATCACATGCCAGATCGCCCTGCCTAT...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATCTACATTGACATTTaGGAACTGACCCATATTCCT +
Preference number: 2 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSIYIDI*ELTHIP
Trigger: AGGAATATGGGTCAGTTCTCAAATGTCAATGTAGAT...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR GCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGATTAAAGACCTCGACTaGTTGGGTCCCTGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQIKDLD*LGPCGC
Trigger: GCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAAT...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCAAAGTCTTGTCCTAAATaGTGCCCAGGGGTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: LWIGRAIWHVITTAQNASKSCPK*CPGVGV
Trigger: CACCCCCACCCCTGGGCACCATTTAGGACAAGACTT...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGCCTTTCTCCTCCACCTaGAAGCATACACACTCTGGG +
Preference number: 2 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQPFSST*KHTHSG
Trigger: CCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGG...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR GCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACCTTGAGAGGAGCTGCTaGTGCACTTTAGGCGAGGGA +
Preference number: 2 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHLERSC*CTLGEG
Trigger: TCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAG...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR GCA 90 bp GCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATTCCAAAAACATGGCTCTTaGCTGGTCCAATCAATCCTT +
Preference number: 2 (lower is better)
Translates to: AAQRFRGTQSMVAESPAFQKHGS*LVQSIL
Trigger: AAGGATTGATTGGACCAGGCAAGAGCCATGTTTTTG...GAATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR GCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGTCTTCCAAAGGCAGTTaGAACCTACTTCTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQSSKGS*NLLLGL
Trigger: CAGGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGA...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATGCTTGGCACAGCTCCTaGACTTATTGTAGGCATTCA +
Preference number: 2 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDAWHSS*TYCRHS
Trigger: TGAATGCCTACAATAAGTTCAGGAGCTGTGCCAAGC...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTTCCTCCAAAGATGTTTaGGGAGCGTGCATTGGTCAT +
Preference number: 2 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCSSKDV*GACIGH
Trigger: ATGACCAATGCACGCTCCTCAAACATCTTTGGAGGA...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR GCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAAGAGAGGAGCTGCTGCTaGACTTTAGGCGAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKERSCC*TLGEGE
Trigger: CTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTC...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR GCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGATCATGTGCTTCCTGTaGCAGAAAAGCAAGGTAGCG +
Preference number: 2 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQIMCFL*QKSKVA
Trigger: CGCTACCTTGCTTTTCTGGCACAGGAAGCACATGAT...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATGAGAAGTTTTGTGACTaGGACACCTTTCCAGTGATC +
Preference number: 2 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDEKFCD*DTFPVI
Trigger: GATCACTGGAAAGGTGTCTCAGTCACAAAACTTCTC...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCATTGTTATTCCCTGGGTaGCTGGGTAGATTTTGGTGG +
Preference number: 2 (lower is better)
Translates to: LWIGRAIWHVITTAQNASLLFPG*LGRFWW
Trigger: CCACCAAAATCTACCCAGTCACCCAGGGAATAACAA...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR GCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAAGAGCTTGAGAGGAGCTaGTGCTGCACTTTAGGCGAG +
Preference number: 2 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKELERS*CCTLGE
Trigger: CTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTC...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR GCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGTGTAAAAGAGGAAAGTaGTTGGCACAGCTCCTGAAC +
Preference number: 2 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQCKRGK*LAQLLN
Trigger: GTTCAGGAGCTGTGCCAAGCACTTTCCTCTTTTACA...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCAAAGGTTAACGGCAGCTaGGGTTATCTGGTTATTCAC +
Preference number: 2 (lower is better)
Translates to: LWIGRAIWHVITTAQNASKVNGS*GYLVIH
Trigger: GTGAATAACCAGATAACCCCAGCTGCCGTTAACCTT...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACGCCAAATTGCCTTTCTaGCCCAGAGCTTTTGTTCTG +
Preference number: 2 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHAKLPF*PRAFVL
Trigger: CAGAACAAAAGCTCTGGGCCAGAAAGGCAATTTGGC...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CAA 90 bp TGTTTTGGCCAGGTAGTTCCTCCAAAGATGTTTGAGGAGCGTGCATaGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGAT +
Preference number: 2 (lower is better)
Translates to: CFGQVVPPKMFEERA*VIYFVDRQGDLACD
Trigger: ATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGCACGCTCCTCAAACATCTTTGGAGGAACTACCTGGCCAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCACACAGAGCTTACTCCTaGCTAAGATTCTTGCTAGAA +
Preference number: 2 (lower is better)
Translates to: LWIGRAIWHVITTAQNASHRAYS*LRFLLE
Trigger: TTCTAGCAAGAATCTTAGTCAGGAGTAAGCTCTGTG...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATGATGGGGGATTGACTTaGTTTTCTATACAGATATGC +
Preference number: 2 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDDGGLT*FSIQIC
Trigger: GCATATCTGTATAGAAAATCAAGTCAATCCCCCATC...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCGTGAGGATGGGGGATTaGCTTGATTTTCTATACAGA +
Preference number: 2 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAVRMGD*LDFLYR
Trigger: TCTGTATAGAAAATCAAGTCAATCCCCCATCCTCAC...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATTTGACATTTGAGAACTaGCCCATATTCCTTTCCCTT +
Preference number: 2 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDLTFEN*PIFLSL
Trigger: AAGGGAAAGGAATATGGGTCAGTTCTCAAATGTCAA...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATGACTCTTATCTACATTaGCATTTGAGAACTGACCCA +
Preference number: 2 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDDSYLH*HLRTDP
Trigger: TGGGTCAGTTCTCAAATGTCAATGTAGATAAGAGTC...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCTTCTATGCTAAGCGATaGGTGACTGCTGATCTGAAA +
Preference number: 2 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAFYAKR*VTADLK
Trigger: TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAA...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGCTGGGTAGATTTTGGTaGAAATGCAGACATTTCATC +
Preference number: 2 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQLGRFW*KCRHFI
Trigger: GATGAAATGTCTGCATTTCCACCAAAATCTACCCAG...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR GCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGTCTTGTCCTAAATGGTaGCCAGGGGTGGGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLSCPKW*PGVGVR
Trigger: CCTCACCCCCACCCCTGGGCACCATTTAGGACAAGA...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTATTCCCTGGGTGACTaGGTAGATTTTGGTGGAAAT +
Preference number: 2 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHYSLGD*VDFGGN
Trigger: ATTTCCACCAAAATCTACCCAGTCACCCAGGGAATA...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR GCA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTCACTGTTTCACAAATTaGAAAACACTGTTCAGTTAC +
Preference number: 2 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCHCFTN*KTLFSY
Trigger: GTAACTGAACAGTGTTTTGCAATTTGTGAAACAGTG...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTAACCTTCTCAAAAACATaGCTCTTGCCTGGTCCAATC +
Preference number: 2 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLTFSKT*LLPGPI
Trigger: GATTGGACCAGGCAAGAGCCATGTTTTTGAGAAGGT...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTAACTTGTATCAGTCTTTaGGGGGCATTAGATGAGGCT +
Preference number: 2 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLTCISL*GALDEA
Trigger: AGCCTCATCTAATGCCCCCCAAAGACTGATACAAGT...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTAGTTGCAACCTACTTCTaGGCCTGGGGTGAGAACGTG +
Preference number: 2 (lower is better)
Translates to: YLHEPGSYICSSSSEHALVATYF*AWGENV
Trigger: CACGTTCTCACCCCAGGCCCAGAAGTAGGTTGCAAC...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTACTTAGCTGGTACAAGTaGGTGGGGATGGCTAAGGGG +
Preference number: 2 (lower is better)
Translates to: YLHEPGSYICSSSSEHALLSWYK*VGMAKG
Trigger: CCCCTTAGCCATCCCCACCCACTTGTACCAGCTAAG...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGGCACGCAGAGCATGGTaGCAGAGTCTCCAGCATTCT +
Preference number: 2 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLARRAW*QSLQHS
Trigger: AGAATGCTGGAGACTCTGCCACCATGCTCTGCGTGC...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CAA 90 bp TTATGGTTTTTCTTTATTCAGAACATAGAGGCATTTCAAGCAATGTaGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: LWFFFIQNIEAFQAM*MAVSLLSAPAAACC
Trigger: GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTGAAATGCCTCTATGTTCTGAATAAAGAAAAACCATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CAA 90 bp GATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTaGATTATTCTTATTTACACGAACCAGGTAGCTATATCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: DSPFSSTWKHTHSGA*IILIYTNQVAISVP
Trigger: TGGAACAGATATAGCTACCTGGTTCGTGTAAATAAGAATAATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGAGGAAGGTCAGGAACTaGGAAAGGGAAGCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLRKVRN*EREAVW
Trigger: CCACACTGCTTCCCTTTCTCAGTTCCTGACCTTCCT...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACAGTCAGAATATGAGCTaGGTTACAAAAATGTCCATG +
Preference number: 2 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHSQNMS*VTKMSM
Trigger: CATGGACATTTTTGTAACTCAGCTCATATTCTGACT...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGGAACAGAGGCAGAGCTaGACGGAAAGGAGGTTTCCA +
Preference number: 2 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLEQRQS*TERRFP
Trigger: TGGAAACCTCCTTTCCGTTCAGCTCTGCCTCTGTTC...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCAATACCCCACCCCCAGTaGGAGGTGCTCTGCTCTTAC +
Preference number: 2 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEAIPHPQ*EVLCSY
Trigger: GTAAGAGCAGAGCACCTCCCACTGGGGGTGGGGTAT...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGTCCTGGCCAGTGTTTTaGCCAGGTAGTTCCTCCAAA +
Preference number: 2 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLSWPVF*PGSSSK
Trigger: TTTGGAGGAACTACCTGGCCAAAACACTGGCCAGGA...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp ATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATGGTCGAAGCTTAACATGGCTCTTGCCTaGTCCAATCAATCCTTGACG +
Preference number: 2 (lower is better)
Translates to: IFYTDMQSAGQIPEWSKLNMALA*SNQSLT
Trigger: CGTCAAGGATTGATTGGACCAGGCAAGAGCCATGTT...AAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACGAGAACGTGAGGGGATaGGGTGTTTCAACACAGAAC +
Preference number: 2 (lower is better)
Translates to: QNASLEKLKVNPIYKNADENVRG*GVSTQN
Trigger: GTTCTGTGTTGAAACACCCCATCCCCTCACGTTCTC...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTAACTAAACAGTCAGGATaGAGTCAGAGATCCAGAACC +
Preference number: 2 (lower is better)
Translates to: YLHEPGSYICSSSSEHALTKQSG*SQRSRT
Trigger: GGTTCTGGATCTCTGACTCCATCCTGACTGTTTAGT...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp ATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATGGTCGAAGCTTATAGTGTTCCCGGGCTaGAGGTTTTGGGATTTCTAT +
Preference number: 2 (lower is better)
Translates to: IFYTDMQSAGQIPEWSKLIVFPG*RFWDFY
Trigger: ATAGAAATCCCAAAACCTCCAGCCCGGGAACACTAT...AAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGAGCATGGCTGTAATGTaGATTGAGGTACACCTGTAC +
Preference number: 2 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLSMAVM*IEVHLY
Trigger: GTACAGGTGTACCTCAATCCACATTACAGCCATGCT...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR TCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGCTAGAAAGCAATTTCTaGAGAACTGGATGGGTTTTC +
Preference number: 2 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLLESNF*RTGWVF
Trigger: GAAAACCCATCCAGTTCTTCAGAAATTGCTTTCTAG...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp GCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCATCCTaGCCAGTGTTTTGGCCAGGTAGTTCCTCCAAAGAT +
Preference number: 3 (lower is better)
Translates to: ACCQPLLLLAAS*PVFWPGSSSKD
Trigger: ATCTTTGGAGGAACTACCTGGCCAAAACACTGGCCAGGATGCAGCAAGCAGCAGCAGGGGCTGACAGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CAA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCGGATGGGGGATTGACTaGATTTTCTATACAGATATG +
Preference number: 3 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSGWGID*IFYTDM
Trigger: CATATCTGTATAGAAAATCAAGTCAATCCCCCATCC...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR GCA 72 bp CAGAGAGTCATCTCCAGGCACATTAAAGACCTCGACTaGTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTCC +
Preference number: 3 (lower is better)
Translates to: QRVISRHIKDLD*LGPCGCFTWLS
Trigger: GGACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCCTGGAGATGACTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp AATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCTaGGGTGAGAACGTGAGGGGATGGGGTGTTTCAACA +
Preference number: 3 (lower is better)
Translates to: NLPKAVATYFWA*GENVRGWGVST
Trigger: TGTTGAAACACCCCATCCCCTCACGTTCTCACCCCAGGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CAA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCAGCTTCCCCACACCTTaGTCGATAGTTACAAAAGAG +
Preference number: 3 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCSFPTP*SIVTKE
Trigger: CTCTTTTGTAACTATCGACAAAGGTGTGGGGAAGCT...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR GCA 72 bp GTTACCCAGATGATAAGGTCTGTTCTGCTTGGCACTTaGTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGC +
Preference number: 3 (lower is better)
Translates to: VTQMIRSVLLGT*SAYHFSGWKGS
Trigger: GCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGAACAGACCTTATCATCTGGGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp TGTTCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTaGCTGGAAGGGAAGCAGCAGCTCTTGATAGGGTTT +
Preference number: 3 (lower is better)
Translates to: CSAWHLLRLPLF*LEGKQQLLIGF
Trigger: AAACCCTATCAAGAGCTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CAA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACCCTAAGGCCACAACCTaGCTTTGCCTTTTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHPKATT*LCLFLS
Trigger: AGAGAGAAAAAGGCAAAGCAAGGTTGTGGCCTTAGG...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CAA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTACACACTCTGGGGCCTaGATTATTCTTATTTACACG +
Preference number: 3 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCTHSGA*IILIYT
Trigger: CGTGTAAATAAGAATAATCAAGGCCCCAGAGTGTGT...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp CACCTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTaGTTATTCACAGATCTCTCGCACAGAGCTTACTCC +
Preference number: 3 (lower is better)
Translates to: HLVKRLTAAGVI*LFTDLSHRAYS
Trigger: GGAGTAAGCTCTGTGCGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp TGGTCGAAGCTTATAGTGTTCCCGGGCTGGAGGTTTTaGGATTTCTATGCTAAGCGATGGGTGACTGCTGAT +
Preference number: 3 (lower is better)
Translates to: WSKLIVFPGWRF*DFYAKRWVTAD
Trigger: ATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCCCGGGAACACTATAAGCTTCGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp CACCTAAGCAGAGGGGAGGTTACTTGTATCAGTCTTTaGGGGGCATTAGATGAGGCTGGAGGATCATTAGAG +
Preference number: 3 (lower is better)
Translates to: HLSRGEVTCISL*GALDEAGGSLE
Trigger: CTCTAATGATCCTCCAGCCTCATCTAATGCCCCCCAAAGACTGATACAAGTAACCTCCCCTCTGCTTAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp CATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTaGCATGTGATCACCACTGCTCAGAATGCCTCACTA +
Preference number: 3 (lower is better)
Translates to: HWSSTLWIGRAI*HVITTAQNASL
Trigger: TAGTGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp AGATGTTTGAGGAGCGTGCATTGGTCATCTACTTTGTaGATAGGCAGGGCGATCTGGCATGTGATCACCACT +
Preference number: 3 (lower is better)
Translates to: RCLRSVHWSSTL*IGRAIWHVITT
Trigger: AGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGCACGCTCCTCAAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CAA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCCCATATTCCTTTCCCTaGCTGCCTAAACTTGATATG +
Preference number: 3 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAPYSFP*LPKLDM
Trigger: CATATCAAGTTTAGGCAGCAAGGGAAAGGAATATGG...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp ATTACTGTGGCACCTGGTGAAAAGGTTAACGGCAGCTaGGGTTATCTGGTTATTCACAGATCTCTCGCACAG +
Preference number: 3 (lower is better)
Translates to: ITVAPGEKVNGS*GYLVIHRSLAQ
Trigger: CTGTGCGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAGGTGCCACAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp ATTCCTGAATGGTCGAAGCTTATAGTGTTCCCGGGCTaGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTG +
Preference number: 3 (lower is better)
Translates to: IPEWSKLIVFPG*RFWDFYAKRWV
Trigger: CACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCCCGGGAACACTATAAGCTTCGACCATTCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp GAAGTCTGTTACCCAGATGATAAGGTCTGTTCTGCTTaGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAA +
Preference number: 3 (lower is better)
Translates to: EVCYPDDKVCSA*HLLRLPLFWLE
Trigger: TTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGAACAGACCTTATCATCTGGGTAACAGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR TCA 72 bp TTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTaGATGGTCGAAGCTTATAGTGTTCCCGGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: FLYRYAKCRADS*MVEAYSVPGLE
Trigger: CTCCAGCCCGGGAACACTATAAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR TCA 72 bp AGAGGGAGAAGTTTTGTGACTGAGACACCTTTCCAGTaGTCTCCAGCTGTAAAAGAGGAAAGTGCTTGGCAC +
Preference number: 3 (lower is better)
Translates to: RGRSFVTETPFQ*SPAVKEESAWH
Trigger: GTGCCAAGCACTTTCCTCTTTTACAGCTGGAGATCACTGGAAAGGTGTCTCAGTCACAAAACTTCTCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp TATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATaGTCGAAGCTTATAGTGTTCCCGGGCTGGAGGTTT +
Preference number: 3 (lower is better)
Translates to: YTDMQSAGQIPE*SKLIVFPGWRF
Trigger: AAACCTCCAGCCCGGGAACACTATAAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp AAAATGTCCATGTACATTAGGAGCATGGCTGTAATGTaGATTGAGGTACACCTGTACATCAGCCTTCCGGGC +
Preference number: 3 (lower is better)
Translates to: KMSMYIRSMAVM*IEVHLYISLPG
Trigger: GCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCACATTACAGCCATGCTCCTAATGTACATGGACATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp TTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTaGGGCCTTGATTATTCTTATTTACACGAACCAGGT +
Preference number: 3 (lower is better)
Translates to: FPFLLHLEAYTL*GLDYSYLHEPG
Trigger: ACCTGGTTCGTGTAAATAAGAATAATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp GACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTaGCTGTCCTGGTTATTCTTCCAATTTGTTTTTAAA +
Preference number: 3 (lower is better)
Translates to: DLDCLGPCGCFT*LSWLFFQFVFK
Trigger: TTTAAAAACAAATTGGAAGAATAACCAGGACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CAA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAACAATTTTATCTCTTGTaGGTAGTGCAGAGAAAGGGC +
Preference number: 3 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKQFYLL*VVQRKG
Trigger: GCCCTTTCTCTGCACTACCAACAAGAGATAAAATTG...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp TCTAATCCATCCATGTGGTTGTACAAGAAAAGTGGCTaGAGCAAAACAGCCCGTTCACTTCATGCTCACAAG +
Preference number: 3 (lower is better)
Translates to: SNPSMWLYKKSG*SKTARSLHAHK
Trigger: CTTGTGAGCATGAAGTGAACGGGCTGTTTTGCTCCAGCCACTTTTCTTGTACAACCACATGGATGGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CAA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTAATCTTCCAAAGGCAGTaGCAACCTACTTCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: YLHEPGSYICSSSSEHALIFQRQ*QPTSGP
Trigger: AGGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGAT...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR GCA 72 bp CTTTATTCTTTACCCACACCAAGGAAGTGCTTAACTTaGTCTAAGGCTCTAACAGACACAGCACCAACACTG +
Preference number: 3 (lower is better)
Translates to: LYSLPTPRKCLT*SKALTDTAPTL
Trigger: CAGTGTTGGTGCTGTGTCTGTTAGAGCCTTAGAGCAAGTTAAGCACTTCCTTGGTGTGGGTAAAGAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp GTAGGGTGTAAGCATGCTCTTACTAAACAGTCAGGATaGAGTCAGAGATCCAGAACCTTCTCAAAAACATGG +
Preference number: 3 (lower is better)
Translates to: VGCKHALTKQSG*SQRSRTFSKTW
Trigger: CCATGTTTTTGAGAAGGTTCTGGATCTCTGACTCCATCCTGACTGTTTAGTAAGAGCATGCTTACACCCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR TCA 72 bp TGGTTATTCACAGATCTCTCGCACAGAGCTTACTCCTaGCTAAGATTCTTGCTAGAAAAACACTCCTACCCT +
Preference number: 3 (lower is better)
Translates to: WLFTDLSHRAYS*LRFLLEKHSYP
Trigger: AGGGTAGGAGTGTTTTTCTAGCAAGAATCTTAGTCAGGAGTAAGCTCTGTGCGAGAGATCTGTGAATAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR GCA 72 bp GTCAGAGATCCAGAACCTTCTCAAAAACATGGCTCTTaGCTGGTCCAATCAATCCTTGACGTTTATGATACT +
Preference number: 3 (lower is better)
Translates to: VRDPEPSQKHGS*LVQSILDVYDT
Trigger: AGTATCATAAACGTCAAGGATTGATTGGACCAGGCAAGAGCCATGTTTTTGAGAAGGTTCTGGATCTCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CAA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGTCAAAAACATGGCTCTaGCCTGGTCCAATCAATCCT +
Preference number: 3 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLSKTWL*PGPINP
Trigger: AGGATTGATTGGACCAGGCAAGAGCCATGTTTTTGA...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CCA 72 bp GAGATCCAGAACCTTCTCAAAAACATGGCTCTTGCCTaGTCCAATCAATCCTTGACGTTTATGATACTAATG +
Preference number: 3 (lower is better)
Translates to: EIQNLLKNMALA*SNQSLTFMILM
Trigger: CATTAGTATCATAAACGTCAAGGATTGATTGGACCAGGCAAGAGCCATGTTTTTGAGAAGGTTCTGGATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR-3UTR CAA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGTGGTCCAATCAATCCTaGACGTTTATGATACTAATG +
Preference number: 3 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLWSNQS*TFMILM
Trigger: CATTAGTATCATAAACGTCAAGGATTGATTGGACCA...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR TCA 72 bp CTGATGAGTTCTCTACTAGATGACTCTTATCTACATTaGCATTTGAGAACTGACCCATATTCCTTTCCCTTG +
Preference number: 3 (lower is better)
Translates to: LMSSLLDDSYLH*HLRTDPYSFPL
Trigger: CAAGGGAAAGGAATATGGGTCAGTTCTCAAATGTCAATGTAGATAAGAGTCATCTAGTAGAGAACTCATCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCGCGGTGGTCCAGGGCTaGAAGTGCACCGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSAVVQG*KCTAPT
Trigger: GGTGGGCGCGGTGCACTTGCAGCCCTGGACCACCGC...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCCTTCACTCCACTCGGTaGAGCGGTCCCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSLHSTR*SGPRSW
Trigger: CCAGCTCCTGGGACCGCTTCACCGAGTGGAGTGAAG...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATTCGCGAGGCGGCCGGGATaGGAAGCAGCCGGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: AAQRFRGTQSMVAESPAFARRPG*EAAGVP
Trigger: AGGAACTCCGGCTGCTTCTCATCCCGGCCGCCTCGC...GAATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCCCAGGTCCCTCCGCCTaGCATCCTCTGCCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCPGPSA*HPLPAR
Trigger: CCGGGCGGGCAGAGGATGCCAGGCGGAGGGACCTGG...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTTGCCCGCCCGGTCACTaGGCTGAGCAGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCCPPGH*AEQAGG
Trigger: CCCGCCTGCCTGCTCAGCGCAGTGACCGGGCGGGCA...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGCCCGGCCATGCAGGGTaGTCCCCAACCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: LESELERSCCCTLGEGEQPGHAG*SPTSVR
Trigger: GCGCACGCTGGTTGGGGAGCACCCTGCATGGCCGGG...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCGAGAGGAGCTGCTGCTaGACTTTAGGCGAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSERSCC*TLGEGE
Trigger: CTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTC...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATTCGGACCGCCTAGTCCCTaGCTCCGGCTCATCCCTCTG +
Preference number: 4 (lower is better)
Translates to: AAQRFRGTQSMVAESPAFGPPSP*LRLIPL
Trigger: CAGAGGGATGAGCCGGAGCCAGGGACTAGGCGGTCC...GAATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGACAGGGCCTCCGCCCTaGCGCCCTCCCCGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQTGPPP*RPPRAY
Trigger: GTAAGCCCGGGGAGGGCGCCAGGGCGGAGGCCCTGT...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCGGAGCGCCCGTTCCCTaGCCGCCCCATCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAGAPVP*PPHLQG
Trigger: GCCCTGCAGATGGGGCGGGCAGGGAACGGGCGCTCC...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGCCGCCTGGCATCCTCTaGCCGCCCGGTCACTGCGCT +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQPPGIL*PPGHCA
Trigger: AGCGCAGTGACCGGGCGGGCAGAGGATGCCAGGCGG...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTTCTGCAGCCGCTGCCTaGGGTCTCCGCCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCSAAAA*GLRLQV
Trigger: GACCTGGAGGCGGAGACCTCAGGCAGCGGCTGCAGA...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCGAACAGAGGCAGAGCTaGACGGAAAGGAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSEQRQS*TERRFP
Trigger: TGGAAACCTCCTTTCCGTTCAGCTCTGCCTCTGTTC...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TGGATTGAGGTACACCTGTACATCAGCCTTCCGGGCTGCACAGAGGTTCAGGGGATCCCTCTGGGCTCCTaGTCGGCTGTCGTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: WIEVHLYISLPGCTEVQGIPLGS*SAVVRS
Trigger: GCTCCGGACGACAGCCGAGCAGGAGCCCAGAGGGAT...CCCCTGAACCTCTGTGCAGCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATGTCGCCACCGCCGCTTaGTTCCTCGGAGGAGCAACG +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDVATAA*FLGGAT
Trigger: CGTTGCTCCTCCGAGGAAGCAAGCGGCGGTGGCGAC...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGAGGGGGATGTCCTGGTaGATCCGGATGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LESELERSCCCTLGEGEQRGMSW*IRMPSW
Trigger: CCAGCTGGGCATCCGGATCCACCAGGACATCCCCCT...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCACCCACCCTCACCGCGTaGCCGATGCGCTTGAGGATC +
Preference number: 4 (lower is better)
Translates to: LWIGRAIWHVITTAQNASPTLTA*PMRLRI
Trigger: GATCCTCAAGCGCATCGGGCACGCGGTGAGGGTGGG...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTAGGCGGCCCCCGGCCATaGAGGGTGCTCCCCAACCAG +
Preference number: 4 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLGGPRP*RVLPNQ
Trigger: CTGGTTGGGGAGCACCCTGCATGGCCGGGGGCCGCC...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCCAGATCGCCCAGGCCTaGCTCGATGGCCATCACTAC +
Preference number: 4 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCQIAQA*LDGHHY
Trigger: GTAGTGATGGCCATCGAGGCAGGCCTGGGCGATCTG...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCAACATTTTGGAGGTTTaGTGGCCACTGTTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSNILEV*WPLFCQ
Trigger: TTGGCAGAACAGTGGCCATCAAACCTCCAAAATGTT...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCTTCCGTCGGTTGTCATaGCTCAGATTGGAAGTATTC +
Preference number: 4 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSFRRLS*LRLEVF
Trigger: GAATACTTCCAATCTGAGTCATGACAACCGACGGAA...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATTCGTCCGACTTGTCCTTTaGTACTCCTCCAGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: AAQRFRGTQSMVAESPAFVRLVL*YSSSSV
Trigger: AACGGAGCTGGAGGAGTATCAAAGGACAAGTCGGAC...GAATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGCCAGCTCCGTTTTCCTaGTCACAGCCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LESELERSCCCTLGEGEQPAPFS*SQPAAA
Trigger: AGCTGCAGCTGGCTGTGAGCAGGAAAACGGAGCTGG...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATATCAGCCTTCCGGGCTaGACAGAGGTTCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDISLPG*TEVQGH
Trigger: GTGCCCCTGAACCTCTGTGCAGCCCGGAAGGCTGAT...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATACCTTCCTCCACTGTTaGCCACCCTCCTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDTFLHC*PPSCRL
Trigger: GAGCCTGCAGGAGGGTGGCCAACAGTGGAGGAAGGT...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCATGCGCTTGAGGATCTaGCAGGGCTGCGGGTGCGAG +
Preference number: 4 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAMRLRI*QGCGCE
Trigger: CTCGCACCCGCAGCCCTGCCAGATCCTCAAGCGCAT...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCGGGTCTAGACAGAGTTaGCCAGCAGGGCACAAGCCT +
Preference number: 4 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCGSRQS*PAGHKP
Trigger: AGGCTTGTGCCCTGCTGGCCAACTCTGTCTAGACCC...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTGGAGGAGGAAGTCGGTaGTGTTCCAGTCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCGGGSR*CSSLPG
Trigger: GCCAGGAAGACTGGAACATCACCGACTTCCTCCTCC...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGAGTGGAGTGGCCACATaGAGGCTCCAATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQSGVAT*RLQWEL
Trigger: CAGCTCCCATTGGAGCCTTCATGTGGCCACTCCACT...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp TGGATTGAGGTACACCTGTACATCAGCCTTCCGGGCTGCACAGAGGTTCAGGGGATAGCTCCTCAGAGATaGGTGGGTGTGAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: WIEVHLYISLPGCTEVQGIAPQR*VGVRMG
Trigger: CCCCATCCTCACACCCACTCATCTCTGAGGAGCTAT...CCCCTGAACCTCTGTGCAGCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TGGATTGAGGTACACCTGTACATCAGCCTTCCGGGCTGCACAGAGGTTCAGGGGCTTTCACGCCCGGGGTaGGGAAAAGAAGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: WIEVHLYISLPGCTEVQGLSRPG*GKEAKS
Trigger: GGATTTGGCTTCTTTTCCGCACCCCGGGCGTGAAAG...CCCCTGAACCTCTGTGCAGCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGCCCCTCTGCAGCCGCTaGCTGAGGTCTCCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSPLCSR*LRSPPP
Trigger: TGGAGGCGGAGACCTCAGGCAGCGGCTGCAGAGGGG...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TGGATTGAGGTACACCTGTACATCAGCCTTCCGGGCTGCACAGAGGTTCAGGGGCCTGGTGGATCCGGATaGCCAGCTGGTTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: WIEVHLYISLPGCTEVQGPGGSG*PAGFVL
Trigger: AAGGACAAAACCAGCTGGGCATCCGGATCCACCAGG...CCCCTGAACCTCTGTGCAGCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATTCTTGTCCTAAATGGTaGCCAGGGGTGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDSCPKW*PGVGVR
Trigger: CCTCACCCCCACCCCTGGGCACCATTTAGGACAAGA...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACGCTGTCAGCCCCTGCTaGTGCTTGCTGCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHAVSPC*CLLHPG
Trigger: GCCAGGATGCAGCAAGCAGCAGCAGGGGCTGACAGC...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTTCCTGGGGTCGCGTTaGAGAGGGCTTTCACGCCCG +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHFLGSR*RGLSRP
Trigger: CGGGCGTGAAAGCCCTCTCCAACGCGACCCCAGGAA...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCTCCATCATTTCGCCCTaGCTCTGGGGGAAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: GMAKGQNLPKAVATYFWASIISP*LWGKAS
Trigger: GCTCGCCTTCCCCCAGAGCCAGGGCGAAATGATGGA...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATAAGCTCAAGAGGTCCTaGGTGGAGGGGAGGTTAGCG +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDKLKRS*VEGRLA
Trigger: CGCTAACCTCCCCTCCACCCAGGACCTCTTGAGCTT...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCAGTCTGCTTTCCCATTaGTGGTCCGCAAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCSLLSH*WSARQG
Trigger: TCCCTGCCTTGCGGACCACCAATGGGAAAGCAGACT...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCTTCTATGCTAAGCGATaGGTGACTGCTGATCTGAAA +
Preference number: 4 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSFYAKR*VTADLK
Trigger: TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAA...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCTCTTCTCACCTACCATaGCAGCAGCCAAGTTTGCCG +
Preference number: 4 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCSSHLP*QQPSLP
Trigger: CGGCAAACTTGGCTGCTGTCATGGTAGGTGAGAAGA...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACGCGGTCTCTAGGCCATaGAAGTTGGAGCGTAGCGCG +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHAVSRP*KLERSA
Trigger: CGCGCTACGCTCCAACTTGCATGGCCTAGAGACCGC...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTACAGCAGACAGACCCTaGTCAGCAGCCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCTADRP*SAATTN
Trigger: GTTTGTGGTGGCTGCTGAGCAGGGTCTGTCTGCTGT...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATTCCTGATCACTGGAATGTaGAGGACTAAGCTGACCAAG +
Preference number: 4 (lower is better)
Translates to: AAQRFRGTQSMVAESPAFLITGM*RTKLTK
Trigger: CTTGGTCAGCTTAGTCCTGCACATTCCAGTGATCAG...GAATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TGGATTGAGGTACACCTGTACATCAGCCTTCCGGGCTGCACAGAGGTTCAGGGGTGTGGCTACAGCTCTTaGGACCAGCTCCATAGCATC +
Preference number: 4 (lower is better)
Translates to: WIEVHLYISLPGCTEVQGCGYSS*DQLHSI
Trigger: GATGCTATGGAGCTGGTCGCAAGAGCTGTAGCCACA...CCCCTGAACCTCTGTGCAGCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCAGGCTCCAATGGGAGCTaGTGTATCTCGGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LWIGRAIWHVITTAQNASGSNGS*CISGPH
Trigger: GTGAGGACCCGAGATACAGCAGCTCCCATTGGAGCC...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATGAGCTTGAGAGGAGCTaGTGCTGCACTTTAGGCGAG +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDELERS*CCTLGE
Trigger: CTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTC...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGTCCGGCTCATCCCTCTaGGCTCCTGCTCGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSSGSSL*APARLS
Trigger: CGACAGCCGAGCAGGAGCCCAGAGGGATGAGCCGGA...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGATTTCGCCCTGGCTCTaGGGGAAGGCGAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSISPWL*GKASSA
Trigger: GGCGCTGCTCGCCTTCCCCCAGAGCCAGGGCGAAAT...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGTCCCGTGGAAACTCGTaGCGCACGATGCTGATCACT +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQSRGNS*RTMLIT
Trigger: AGTGATCAGCATCGTGCGCCACGAGTTTCCACGGGA...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCAGTTTGCCGTGTATGTaGAAAGGCAAAACATACAGA +
Preference number: 4 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSSLPCM*KGKTYR
Trigger: TCTGTATGTTTTGCCTTTCCACATACACGGCAAACT...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGCAATGGAGAGTTGGGTaGGAGGCCAATGCCGTATCC +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQQWRVG*EANAVS
Trigger: GGATACGGCATTGGCCTCCCACCCAACTCTCCATTG...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCACGGTCAATGGAGAGTTaGGTGGGAGGCCAATGCCGT +
Preference number: 4 (lower is better)
Translates to: LWIGRAIWHVITTAQNASRSMES*VGGQCR
Trigger: ACGGCATTGGCCTCCCACCCAACTCTCCATTGACCG...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTAGGGAGGGGGATGTCCTaGTGGATCCGGATGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLGRGMS*WIRMPS
Trigger: GCTGGGCATCCGGATCCACCAGGACATCCCCCTCCC...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCAGAGCTCTCTTCTCCTTaGAGGGAGGGGGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: LWIGRAIWHVITTAQNASELSSP*REGDVL
Trigger: CAGGACATCCCCCTCCCTCCAAGGAGAAGAGAGCTC...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATTCGCCAAATTGCCTTTCTaGCCCAGAGCTTTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: AAQRFRGTQSMVAESPAFAKLPF*PRAFVL
Trigger: CAGAACAAAAGCTCTGGGCCAGAAAGGCAATTTGGC...GAATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGAAGTCTTGTCCTAAATaGTGCCCAGGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQKSCPK*CPGVGV
Trigger: CACCCCCACCCCTGGGCACCATTTAGGACAAGACTT...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGGTTGCAACCTACTTCTaGGCCTGGGGTGAGAACGTG +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQVATYF*AWGENV
Trigger: CACGTTCTCACCCCAGGCCCAGAAGTAGGTTGCAAC...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACGGGGCACGCAGAGCATaGTGGCAGAGTCTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHGARRA*WQSLQH
Trigger: ATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCC...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CAA 72 bp AGAGTCATCTCCAGGCACATTAAAGACCTCGACTGCTaGGGTCCCTGTGGCTGCTTCACTTGGCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RVISRHIKDLDC*GPCGCFTWLSW
Trigger: CCAGGACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCCTGGAGATGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCACAGTCTCCTCATTACTaGGACCCGCAGGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LWIGRAIWHVITTAQNASQSPHY*DPQGES
Trigger: GCTTTCTCCCTGCGGGTCTCAGTAATGAGGAGACTG...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp TGGATTGAGGTACACCTGTACATCAGCCTTCCGGGCTGCACAGAGGTTCAGGGGCATCTGTGGAGTTGGTaGCCTCTAACTTTAGAGCCC +
Preference number: 4 (lower is better)
Translates to: WIEVHLYISLPGCTEVQGHLWSW*PLTLEP
Trigger: GGGCTCTAAAGTTAGAGGTCACCAACTCCACAGATG...CCCCTGAACCTCTGTGCAGCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGCCCGGCCAGCACCAGTaGGCAGGGCGGCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLPGQHQ*AGRRQQ
Trigger: CTGTTGCCGCCGCCCTGCGCACTGGTGCTGGCCGGG...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCACTTGAGAGGAGCTGCTaGTGCACTTTAGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: LWIGRAIWHVITTAQNASLERSC*CTLGEG
Trigger: TCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAG...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAACTAGGCCATGCAAGTTaGAGCGTAGCGCGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKLGHAS*SVARLR
Trigger: CCGGAGGCGCGCTACGCTCCAACTTGCATGGCCTAG...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCGGATCATGGTGGCTGTaGCTACAGCTCTTGCGACCA +
Preference number: 4 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAGSWWL*LQLLRP
Trigger: TGGTCGCAAGAGCTGTAGCCACAGCCACCATGATCC...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TGGATTGAGGTACACCTGTACATCAGCCTTCCGGGCTGCACAGAGGTTCAGGGGAGAGCAAGTTCTGGTTaGATCATGGTGGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: WIEVHLYISLPGCTEVQGRASSG*IMVAVA
Trigger: AGCCACAGCCACCATGATCCAACCAGAACTTGCTCT...CCCCTGAACCTCTGTGCAGCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCTACCACTTTTCTGGCTaGAAGGGAAGCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCYHFSG*KGSSSS
Trigger: AGAGCTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTA...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATTCTCAGGATTGAGACAGTaGCATCAGCATCAGAACTTA +
Preference number: 4 (lower is better)
Translates to: AAQRFRGTQSMVAESPAFSGLRQ*HQHQNL
Trigger: TAAGTTCTGATGCTGATGTCACTGTCTCAATCCTGA...GAATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCATTCCATACGGTAAGCTaGCGGGGTCCCACATTAGAC +
Preference number: 4 (lower is better)
Translates to: LWIGRAIWHVITTAQNASFHTVS*RGPTLD
Trigger: GTCTAATGTGGGACCCCGTCAGCTTACCGTATGGAA...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp TGGATTGAGGTACACCTGTACATCAGCCTTCCGGGCTGCACAGAGGTTCAGGGGGCTTGGCACAGCTCCTaGACTTATTGTAGGCATTCA +
Preference number: 4 (lower is better)
Translates to: WIEVHLYISLPGCTEVQGAWHSS*TYCRHS
Trigger: TGAATGCCTACAATAAGTTCAGGAGCTGTGCCAAGC...CCCCTGAACCTCTGTGCAGCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGGAGACACCTTTCCAGTaGTCTCCAGCTGTAAAAGAG +
Preference number: 4 (lower is better)
Translates to: LESELERSCCCTLGEGEQETPFQ*SPAVKE
Trigger: CTCTTTTACAGCTGGAGATCACTGGAAAGGTGTCTC...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp TGGATTGAGGTACACCTGTACATCAGCCTTCCGGGCTGCACAGAGGTTCAGGGGTCCTCCAAAGATGTTTaGGGAGCGTGCATTGGTCAT +
Preference number: 4 (lower is better)
Translates to: WIEVHLYISLPGCTEVQGSSKDV*GACIGH
Trigger: ATGACCAATGCACGCTCCTCAAACATCTTTGGAGGA...CCCCTGAACCTCTGTGCAGCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTGACAGCAGCCAAGTTTaGCGTGTATGTGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCDSSQV*RVCGKA
Trigger: TGCCTTTCCACATACACGGCAAACTTGGCTGCTGTC...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCACAGACCAAATCCAATaGACAGCAGCACAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCTDQIQ*TAAQRA
Trigger: GGCTCTTTGTGCTGCTGTGCATTGGATTTGGTCTGT...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTTCTTCCAAAGGCAGTTaGAACCTACTTCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCSSKGS*NLLLGL
Trigger: CAGGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGA...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGATCATGTGCTTCCTGTaGCAGAAAAGCAAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: LESELERSCCCTLGEGEQIMCFL*QKSKVA
Trigger: CGCTACCTTGCTTTTCTGGCACAGGAAGCACATGAT...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATTCAGGAAGTGCTTAACTTaGTCTAAGGCTCTAACAGAC +
Preference number: 4 (lower is better)
Translates to: AAQRFRGTQSMVAESPAFRKCLT*SKALTD
Trigger: GTCTGTTAGAGCCTTAGAGCAAGTTAAGCACTTCCT...GAATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGCCCACACCAAGGAAGTaGTTAACTTGCTCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: LESELERSCCCTLGEGEQPTPRK*LTCSKA
Trigger: AGCCTTAGAGCAAGTTAAGCACTTCCTTGGTGTGGG...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCCGACGCGCTCTCGCCTaGATTCTTTTCCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GMAKGQNLPKAVATYFWARRALA*ILFLFC
Trigger: GCAGAAAAGGAAAAGAATCCAGGCGAGAGCGCGTCG...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATTCATGTTCCAGTCTTCCTaGCACAGCAACAAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: AAQRFRGTQSMVAESPAFMFQSS*HSNKLK
Trigger: TTTTAGCTTGTTGCTGTGCCAGGAAGACTGGAACAT...GAATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGGCTCTGTGTAATCTCTaGCTGGTGTGGAGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQALCNL*LVWSQY
Trigger: ATACTGGCTCCACACCAGCCAGAGATTACACAGAGC...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGTGTGGCTGCTTCACTTaGCTGTCCTGGTTATTCTTC +
Preference number: 4 (lower is better)
Translates to: LESELERSCCCTLGEGEQCGCFT*LSWLFF
Trigger: GAAGAATAACCAGGACAGCCAAGTGAAGCAGCCACA...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACAAGACCTCGACTGCTTaGGTCCCTGTGGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHKTSTA*VPVAAS
Trigger: TGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTT...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACCCTGTCACCCGCAGCTaGAGCGCCCGTTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QNASLEKLKVNPIYKNADPVTRS*SARSLP
Trigger: GGGCAGGGAACGGGCGCTCCAGCTGCGGGTGACAGG...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACATTCTGACTCTCCCGTaGAAACTCGTGGCGCACGAT +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHILTLP*KLVAHD
Trigger: ATCGTGCGCCACGAGTTTCCACGGGAGAGTCAGAAT...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACAGCCACATTGTCCAGTaGAGTGGCCACATGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHSHIVQ*SGHMKA
Trigger: AGCCTTCATGTGGCCACTCCACTGGACAATGTGGCT...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGTCCTTCTATGGCAAATaGCTTCCCCACAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQSFYGK*LPHSEK
Trigger: CTTCTCACTGTGGGGAAGCCATTTGCCATAGAAGGA...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGTGTGCTCACCAATGGTaGTCAAAATGGACAGACCAA +
Preference number: 4 (lower is better)
Translates to: LESELERSCCCTLGEGEQCAHQW*SKWTDQ
Trigger: TTGGTCTGTCCATTTTGACCACCATTGGTGAGCACA...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGCTGCTTTCCCATTGGTaGTCCGCAAGGCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSLLSHW*SARQGA
Trigger: AGCTCCCTGCCTTGCGGACCACCAATGGGAAAGCAG...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGAAGGTTAACGGCAGCTaGGGTTATCTGGTTATTCAC +
Preference number: 4 (lower is better)
Translates to: LESELERSCCCTLGEGEQKVNGS*GYLVIH
Trigger: GTGAATAACCAGATAACCCCAGCTGCCGTTAACCTT...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTAATACCCCACCCCCAGTaGGAGGTGCTCTGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLIPHPQ*EVLCSY
Trigger: GTAAGAGCAGAGCACCTCCCACTGGGGGTGGGGTAT...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCACTAAACAGTCAGGATaGAGTCAGAGATCCAGAACC +
Preference number: 4 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCTKQSG*SQRSRT
Trigger: GGTTCTGGATCTCTGACTCCATCCTGACTGTTTAGT...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATGGCATTCAAATTGGTTaGGGGTGGAACAATGAGTCC +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDGIQIG*GWNNES
Trigger: GGACTCATTGTTCCACCCCCAACCAATTTGAATGCC...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTACTGCTTGGGTCCCTGTaGCTGCTTCACTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLLLGSL*LLHLAV
Trigger: GACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAG...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACCGCTTACCACTTTTCTaGCTGGAAGGGAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHRLPLF*LEGKQQ
Trigger: CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCG...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATTCTCTAATCCATCCATGTaGTTGTACAAGAAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: AAQRFRGTQSMVAESPAFSNPSM*LYKKSG
Trigger: GCCACTTTTCTTGTACAACCACATGGATGGATTAGA...GAATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCACCTCGGGGGCAGCAGTaGCAGAGGAGCGACGCGCTC +
Preference number: 4 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEAPRGQQ*QRSDAL
Trigger: GAGCGCGTCGCTCCTCTGTCACTGCTGCCCCCGAGG...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCAGCCCAGAGAAGTGTTTaGTGCCCATTTGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LWIGRAIWHVITTAQNASAQRSV*CPFAKS
Trigger: AGACTTTGCAAATGGGCATCAAACACTTCTCTGGGC...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTAGGGCGATCTGGCATGTaGTCACCACTGCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLGRSGM*SPLLRM
Trigger: CATTCTGAGCAGTGGTGATCACATGCCAGATCGCCC...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCACTGTTCCAGCTCATCTaGGCATGCTTTATCATGTGC +
Preference number: 4 (lower is better)
Translates to: LWIGRAIWHVITTAQNASLFQLI*ACFIMC
Trigger: GCACATGATAAAGCATGCTCAGATGAGCTGGAACAG...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGGTGAAGACAAAAGGATaGTCAATCAGGGTAACCACT +
Preference number: 4 (lower is better)
Translates to: LESELERSCCCTLGEGEQVKTKG*SIRVTT
Trigger: AGTGGTTACCCTGATTGAGCATCCTTTTGTCTTCAC...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATTATCACCTGGCTCCGTaGAGTATTGATGCTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDYHLAP*SIDAKG
Trigger: TCCTTTAGCATCAATACTGCACGGAGCCAGGTGATA...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGTGTTTGATGCCCATTTaGAAAGTCTCCGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQCLMPI*KVSVTA
Trigger: TGCTGTCACGGAGACTTTGCAAATGGGCATCAAACA...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGAGCCTGTATACTATGTaGTCACCAATGGTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LESELERSCCCTLGEGEQSLYTM*SPMVVK
Trigger: TTTGACCACCATTGGTGAGCACATAGTATACAGGCT...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCGTGTGGAGCCAGTATTaGAGCTTGGATTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCVWSQY*SLDLFL
Trigger: CAAAAACAAATCCAAGCTGCAATACTGGCTCCACAC...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCGTTCTGCTTGGCACTTaGTCCGCTTACCACTTTTCT +
Preference number: 4 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAVLLGT*SAYHFS
Trigger: AGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGAAC...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTACAAGCGGGTCCACATTaGCTTTCCCATGGGGTCATG +
Preference number: 4 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLQAGPH*LSHGVM
Trigger: CATGACCCCATGGGAAAGCCAATGTGGACCCGCTTG...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAAGAAGTGACTGCCATGTaGGCAGTCCCTCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKEVTAM*AVPLRR
Trigger: TCTCCTGAGAGGGACTGCCCACATGGCAGTCACTTC...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACGAAAGGGAAGCAGTGTaGTCACCTAGGACTCACAAG +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHEREAV*SPRTHK
Trigger: CTTGTGAGTCCTAGGTGACCACACTGCTTCCCTTTC...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGACCTTCTCAAAAACATaGCTCTTGCCTGGTCCAATC +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQTFSKT*LLPGPI
Trigger: GATTGGACCAGGCAAGAGCCATGTTTTTGAGAAGGT...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAAGCACGCAGAGCATGGTaGCAGAGTCTCCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKARRAW*QSLQHS
Trigger: AGAATGCTGGAGACTCTGCCACCATGCTCTGCGTGC...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTAGCATGGCTGTAATGTaGATTGAGGTACACCTGTAC +
Preference number: 4 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCSMAVM*IEVHLY
Trigger: GTACAGGTGTACCTCAATCCACATTACAGCCATGCT...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGACAGATGTTCAAGGCTaGAGAAAAGGAGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: LESELERSCCCTLGEGEQTDVQG*RKGEDF
Trigger: AAAGTCTTCTCCTTTTCTTCAGCCTTGAACATCTGT...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTAGCGATGGGTGACTGCTaGTCTGAAAATGGCCTAGTG +
Preference number: 4 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLAMGDC*SENGLV
Trigger: CACTAGGCCATTTTCAGATCAGCAGTCACCCATCGC...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATCACACTCTGGGGCCTTaGTTATTCTTATTTACACGA +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDHTLGP*LFLFTR
Trigger: TCGTGTAAATAAGAATAATCAAGGCCCCAGAGTGTG...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCCTAGAAAGCAATTTCTaGAGAACTGGATGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCLESNF*RTGWVF
Trigger: GAAAACCCATCCAGTTCTTCAGAAATTGCTTTCTAG...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGTGCACCACCACGGTATaGCACACACTTTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSCTTTV*HTLCRK
Trigger: CTTCCTGCAAAGTGTGTGCCATACCGTGGTGGTGCA...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCTTAATACTCTCAAGCTaGATCTGTAGGAAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCLILSS*ICRKLK
Trigger: CTTGAGCTTCCTACAGATCCAGCTTGAGAGTATTAA...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAACTGGTTGGATCATGGTaGCTGTGGCTACAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKLVGSW*LWLQLL
Trigger: CAAGAGCTGTAGCCACAGCCACCATGATCCAACCAG...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATAGCTTACTTGGATGTTaGAAGTGGGTTTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDSLLGC*KWVLCL
Trigger: GAGACACAAAACCCACTTCCAACATCCAAGTAAGCT...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTTAGCTCGGATATGTTaGCGGTCAATGGAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHLARIC*RSMESW
Trigger: CCAACTCTCCATTGACCGCCAACATATCCGAGCTAA...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCAATAGTGTTCCCGGGCTaGAGGTTTTGGGATTTCTAT +
Preference number: 4 (lower is better)
Translates to: LWIGRAIWHVITTAQNASIVFPG*RFWDFY
Trigger: ATAGAAATCCCAAAACCTCCAGCCCGGGAACACTAT...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAATTCTCCTCCTGCCTGTaGGCAGCCAAACTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKFSSCL*AAKLPE
Trigger: TTCTGGAAGTTTGGCTGCCCACAGGCAGGAGGAGAA...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CAA 72 bp CAAAGATGTTTGAGGAGCGTGCATTGGTCATCTACTTaGTGGATAGGCAGGGCGATCTGGCATGTGATCACC +
Preference number: 4 (lower is better)
Translates to: QRCLRSVHWSST*WIGRAIWHVIT
Trigger: GGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGCACGCTCCTCAAACATCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CAA 72 bp CAGGTAGTTCCTCCAAAGATGTTTGAGGAGCGTGCATaGGTCATCTACTTTGTGGATAGGCAGGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: QVVPPKMFEERA*VIYFVDRQGDL
Trigger: CAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGCACGCTCCTCAAACATCTTTGGAGGAACTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CAA 72 bp TGTTACCCAGATGATAAGGTCTGTTCTGCTTGGCACTaGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CYPDDKVCSAWH*LRLPLFWLEGK
Trigger: CTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGAACAGACCTTATCATCTGGGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGTTTTTCCATGAGCAATaGGCCCTAAGGGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSFFHEQ*ALRADP
Trigger: AGGGTCTGCCCTTAGGGCTCATTGCTCATGGAAAAA...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAATCATCGTGCTGGGAATaGGAGCAAGTTCTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKSSCWE*EQVLVG
Trigger: TCCAACCAGAACTTGCTCTCATTCCCAGCACGATGA...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCGTGACTTGTATTGACTaGTTAGCTCGGATATGTTGG +
Preference number: 4 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAVTCID*LARICW
Trigger: CCAACATATCCGAGCTAATCAGTCAATACAAGTCAC...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGGACTCTTATCTACATTaGCATTTGAGAACTGACCCA +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQDSYLH*HLRTDP
Trigger: TGGGTCAGTTCTCAAATGTCAATGTAGATAAGAGTC...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACATTCTTTTCCTTTTCTaGCCAGGCGAGACCCACTTA +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHILFLF*PGETHL
Trigger: TAAGTGGGTCTCGCCTGGGCAGAAAAGGAAAAGAAT...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCAAAGTTCATGTCTTCTaGTATCTTTTCCAGCAGATC +
Preference number: 4 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCKVHVF*YLFQQI
Trigger: GATCTGCTGGAAAAGATAGCAGAAGACATGAACTTT...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTACAGCAAAACTTCTCTTaGCACAGGGAACCACCCTGT +
Preference number: 4 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLQQNFS*HREPPC
Trigger: ACAGGGTGGTTCCCTGTGGCAAGAGAAGTTTTGCTG...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGCATATTCCTTTCCCTTaGTGCCTAAACTTGATATGC +
Preference number: 4 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQHIPFP*CLNLIC
Trigger: GCATATCAAGTTTAGGCAGCAAGGGAAAGGAATATG...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCACTGGAGCGGAGCGATTaGAAACACATTAAAATGAAG +
Preference number: 4 (lower is better)
Translates to: LWIGRAIWHVITTAQNASLERSD*KHIKMK
Trigger: CTTCATTTTAATGTGTTTGCAATCGCTCCGCTCCAG...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCGTATCATTACTGCTATaGAGGCTGCTAAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAVSLLL*RLLKRL
Trigger: CAGCCTTTTTAGCAGCCTCCATAGCAGTAATGATAC...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGCATTGTCCAGTGGAGTaGCCACATGAAGGCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSHCPVE*PHEGSN
Trigger: ATTGGAGCCTTCATGTGGCCACTCCACTGGACAATG...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCGGGAGTCAAACCAAATaGACTCTTCCATTCATACAG +
Preference number: 4 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAGSQTK*TLPFIQ
Trigger: CTGTATGAATGGAAGAGTCCATTTGGTTTGACTCCC...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAATGCCGTATCCTTCTATaGCAAATGGCTTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKCRILL*QMASPQ
Trigger: CTGTGGGGAAGCCATTTGCCATAGAAGGATACGGCA...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACCTATGTGCTCACCAATaGTGGTCAAAATGGACAGAC +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHLCAHQ*WSKWTD
Trigger: GTCTGTCCATTTTGACCACCATTGGTGAGCACATAG...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAAATCCGGATGCCCAGCTaGTTTTGTCCTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKIRMPS*FCPSSS
Trigger: TGATGAGGAAGGACAAAACCAGCTGGGCATCCGGAT...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGTCCTGGCCAGTGTTTTaGCCAGGTAGTTCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSSWPVF*PGSSSK
Trigger: TTTGGAGGAACTACCTGGCCAAAACACTGGCCAGGA...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAAAAGGTCTGTTCTGCTTaGCACTTGCTCCGCTTACCA +
Preference number: 4 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKKVCSA*HLLRLP
Trigger: TGGTAAGCGGAGCAAGTGCCAAGCAGAACAGACCTT...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGCGTGGCGCACGATGCTaGTCACTGGAATGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLRGARC*SLECAG
Trigger: TCCTGCACATTCCAGTGATCAGCATCGTGCGCCACG...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACGCAGTCAGCATCTATTaGCACTTCATAATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHAVSIY*HFIIQK
Trigger: CTTCTGGATTATGAAGTGTCAATAGATGCTGACTGC...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACGTGAGGATGGGGGATTaGCTTGATTTTCTATACAGA +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHVRMGD*LDFLYR
Trigger: TCTGTATAGAAAATCAAGTCAATCCCCCATCCTCAC...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTATTGTTATTCCCTGGGTaGCTGGGTAGATTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLLLFPG*LGRFWW
Trigger: CCACCAAAATCTACCCAGTCACCCAGGGAATAACAA...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATAGTCAGAATATGAGCTaGGTTACAAAAATGTCCATG +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDSQNMS*VTKMSM
Trigger: CATGGACATTTTTGTAACTCAGCTCATATTCTGACT...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCAAGCGCCGACACCCCTTaGACCACCACGGTATGGCAC +
Preference number: 4 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEASADTP*TTTVWH
Trigger: GTGCCATACCGTGGTGGTGCAAGGGGTGTCGGCGCT...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCTTTCCAGCAGATCAATaGAATATCCATAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAFPADQ*NIHSST
Trigger: AGTGCTGCTATGGATATTGCATTGATCTGCTGGAAA...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATAAGGATGATGTAACTTaGGGTCATGTATTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDKDDVT*GHVFQK
Trigger: TTTCTGGAATACATGACCCCAAGTTACATCATCCTT...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGTCCATCAGGGGTGGCTaGAACATTGTACCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSSIRGG*NIVPSH
Trigger: ATGAGAAGGTACAATGTTCCAGCCACCCCTGATGGA...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCACTGGGTAGATTTTGGTaGAAATGCAGACATTTCATC +
Preference number: 4 (lower is better)
Translates to: LWIGRAIWHVITTAQNASLGRFW*KCRHFI
Trigger: GATGAAATGTCTGCATTTCCACCAAAATCTACCCAG...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAACCCATGGGGTCATGTTaGAGATTCCAGATGAAAAAG +
Preference number: 4 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKPMGSC*RFQMKK
Trigger: CTTTTTCATCTGGAATCTTCAACATGACCCCATGGG...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGGAGAAGTTTTGTGACTaGGACACCTTTCCAGTGATC +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSEKFCD*DTFPVI
Trigger: GATCACTGGAAAGGTGTCTCAGTCACAAAACTTCTC...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp ATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATGGTCGAAGCTTCCATATCAGTATCTCTaGGCCTCCCTCCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: IFYTDMQSAGQIPEWSKLPYQYL*ASLHSR
Trigger: CCTGGAGTGGAGGGAGGCTCAGAGATACTGATATGG...AAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACCGTTTGGTCTTGAAATaGTGCTGCTTTTCCTCTATA +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHRLVLK*CCFSSI
Trigger: TATAGAGGAAAAGCAGCAGCATTTCAAGACCAAACG...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATCACTGTTTCACAAATTaGAAAACACTGTTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDHCFTN*KTLFSY
Trigger: GTAACTGAACAGTGTTTTGCAATTTGTGAAACAGTG...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAAGTGAAATCTATCACCTaGCTCCGTGCAGTATTGATG +
Preference number: 4 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKVKSIT*LRAVLM
Trigger: CATCAATACTGCACGGAGCCAGGTGATAGATTTCAC...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTATCCAGTCCAACATTTTaGAGGTTTGATGGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLSSPTF*RFDGHC
Trigger: ACAGTGGCCATCAAACCTCCAAAATGTTGGACTGGA...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp ATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATGGTCGAAGCTTCTTAGCTGGTACAAGTaGGTGGGGATGGCTAAGGGG +
Preference number: 4 (lower is better)
Translates to: IFYTDMQSAGQIPEWSKLLSWYK*VGMAKG
Trigger: CCCCTTAGCCATCCCCACCCACTTGTACCAGCTAAG...AAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGCCATGTGACTTGTATTaGCTGATTAGCTCGGATATG +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSPCDLY*LISSDM
Trigger: CATATCCGAGCTAATCAGTCAATACAAGTCACATGG...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTACACAGAGCTTACTCCTaGCTAAGATTCTTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLHRAYS*LRFLLE
Trigger: TTCTAGCAAGAATCTTAGTCAGGAGTAAGCTCTGTG...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACATCTACATTGACATTTaGGAACTGACCCATATTCCT +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHIYIDI*ELTHIP
Trigger: AGGAATATGGGTCAGTTCTCAAATGTCAATGTAGAT...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAACATTGCTACTTAACATaGAGACTGCTTCGTTTCACC +
Preference number: 4 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKHCYLT*RLLRFT
Trigger: GGTGAAACGAAGCAGTCTTCATGTTAAGTAGCAATG...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp ATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATGGTCGAAGCTTGCTAAAGGAAGTGACTaGCATGTGGGCAGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: IFYTDMQSAGQIPEWSKLAKGSD*HVGSPS
Trigger: AGAGGGACTGCCCACATGGCAGTCACTTCCTTTAGC...AAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGATTAAAGACCTCGACTaGTTGGGTCCCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLIKDLD*LGPCGC
Trigger: GCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAAT...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCAGACCCACTTATTTCCTaGGGTCGCGTTGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEADPLIS*GRVGEG
Trigger: GCCCTCTCCAACGCGACCCCAGGAAATAAGTGGGTC...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACCCAGGCCTGCCTCGATaGCCATCACTACTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: QNASLEKLKVNPIYKNADPGLPR*PSLLPK
Trigger: CTTTGGAAGTAGTGATGGCCATCGAGGCAGGCCTGG...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGGGCATGACCCCAAACTaGGTTGTAATTTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSGMTPN*VVISKI
Trigger: GATTTTCGAAATTACAACCCAGTTTGGGGTCATGCC...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp ATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATGGTCGAAGCTTGTTCTGGTTGGATCATaGTGGCTGTGGCTACAGCTC +
Preference number: 4 (lower is better)
Translates to: IFYTDMQSAGQIPEWSKLVLVGS*WLWLQL
Trigger: GAGCTGTAGCCACAGCCACCATGATCCAACCAGAAC...AAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTACCACTCCATCAGGGGTaGCTGGAACATTGTACCTTC +
Preference number: 4 (lower is better)
Translates to: YLHEPGSYICSSSSEHALPLHQG*LEHCTF
Trigger: GAAGGTACAATGTTCCAGCCACCCCTGATGGAGTGG...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTATATTCCCTGGGTGACTaGGTAGATTTTGGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLYSLGD*VDFGGN
Trigger: ATTTCCACCAAAATCTACCCAGTCACCCAGGGAATA...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCAACCTACTTCTGGGCCTaGGGTGAGAACGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEATYFWA*GENVRG
Trigger: TCCCCTCACGTTCTCACCCCAGGCCCAGAAGTAGGT...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTAATAGGCAGGGCGATCTaGCATGTGATCACCACTGCT +
Preference number: 4 (lower is better)
Translates to: YLHEPGSYICSSSSEHALIGRAI*HVITTA
Trigger: AGCAGTGGTGATCACATGCCAGATCGCCCTGCCTAT...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACTGTGCAGGACTAAGCTaGCCAAGTCGAGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: QNASLEKLKVNPIYKNADCAGLS*PSRAPS
Trigger: TGATGGAGCTCGACTTGGTCAGCTTAGTCCTGCACA...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp ATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATGGTCGAAGCTTAGAAGAAAGGGCTGGTaGAATCTATCACCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: IFYTDMQSAGQIPEWSKLRRKGW*NLSPGS
Trigger: GGAGCCAGGTGATAGATTTCACCAGCCCTTTCTTCT...AAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp ATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATGGTCGAAGCTTACTAGCCCAGTCCAGTaGCCATTTTTCCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: IFYTDMQSAGQIPEWSKLTSPVQ*PFFHAP
Trigger: TGGAGCATGGAAAAATGGGCACTGGACTGGGCTAGT...AAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACGGGTCCTCACTAAGATaGCCAAGCTGGTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: QNASLEKLKVNPIYKNADGSSLR*PSWWRR
Trigger: TCTTCTCCACCAGCTTGGGCATCTTAGTGAGGACCC...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp ATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATGGTCGAAGCTTAAGACGGCAGTGATGTaGAGAGCCACAAAAATCCCC +
Preference number: 4 (lower is better)
Translates to: IFYTDMQSAGQIPEWSKLKTAVM*RATKIP
Trigger: GGGGATTTTTGTGGCTCTGCACATCACTGCCGTCTT...AAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACTGGGTGGGAGGCCAATaGCGTATCCTTCTATGGCAA +
Preference number: 4 (lower is better)
Translates to: QNASLEKLKVNPIYKNADWVGGQ*RILLWQ
Trigger: TTGCCATAGAAGGATACGGCATTGGCCTCCCACCCA...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTTGGTCTTGAAATGCTaGTGCTTTTCCTCTATAAAT +
Preference number: 4 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHLVLKC*CFSSIN
Trigger: ATTTATAGAGGAAAAGCAGCAGCATTTCAAGACCAA...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGTCTCTGGGCCTGCTCTaGCCATATTCCATAGTCCAT +
Preference number: 4 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLSLGLL*PYSIVH
Trigger: ATGGACTATGGAATATGGCCAGAGCAGGCCCAGAGA...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCATATGTTGGCGGTCAATaGAGAGTTGGGTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEAYVGGQ*RVGWEA
Trigger: GGCCTCCCACCCAACTCTCCATTGACCGCCAACATA...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTACCGGGCTGGAGGTTTTaGGATTTCTATGCTAAGCGA +
Preference number: 4 (lower is better)
Translates to: YLHEPGSYICSSSSEHALPGWRF*DFYAKR
Trigger: TCGCTTAGCATAGAAATCCCAAAACCTCCAGCCCGG...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTAGAGAACGTGAGGGGATaGGGTGTTTCAACACAGAAC +
Preference number: 4 (lower is better)
Translates to: YLHEPGSYICSSSSEHALENVRG*GVSTQN
Trigger: GTTCTGTGTTGAAACACCCCATCCCCTCACGTTCTC...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTATCCAGCATTCTTAGCTaGTACAAGTGGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: YLHEPGSYICSSSSEHALSSILS*YKWVGM
Trigger: CATCCCCACCCACTTGTACCAGCTAAGAATGCTGGA...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGTGGTCATCTACTTTGTaGATAGGCAGGGCGATCTGG +
Preference number: 4 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLWSSTL*IGRAIW
Trigger: CCAGATCGCCCTGCCTATCCACAAAGTAGATGACCA...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
3UTR CAA 72 bp TTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTaGATTATTCTTATTTACACGAACCAGGTAGCTATA +
Preference number: 4 (lower is better)
Translates to: FSSTWKHTHSGA*IILIYTNQVAI
Trigger: TATAGCTACCTGGTTCGTGTAAATAAGAATAATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGTGTGTTGTTTTTCCATaGGCAATGAGCCCTAAGGGC +
Preference number: 4 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLCVVFP*AMSPKG
Trigger: GCCCTTAGGGCTCATTGCTCATGGAAAAACAACACA...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCAAGGAAGGTCAGGAACTaGGAAAGGGAAGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEARKVRN*EREAVW
Trigger: CCACACTGCTTCCCTTTCTCAGTTCCTGACCTTCCT...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTAGGCTGTAATGTGGATTaGGGTACACCTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: YLHEPGSYICSSSSEHALGCNVD*GTPVHQ
Trigger: CTGATGTACAGGTGTACCTCAATCCACATTACAGCC...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGACACAGCACCAACACTaGGAAGTCTGTTACCCAGAT +
Preference number: 4 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLTQHQH*EVCYPD
Trigger: ATCTGGGTAACAGACTTCTCAGTGTTGGTGCTGTGT...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGTTCCTATCAAAAATATaGGTTGGGAGAAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSFLSKI*VGRKRG
Trigger: GCCTCTTTTTCTCCCAACTCATATTTTTGATAGGAA...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp ATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATGGTCGAAGCTTAGCTCTGAGAGTTCCTaGATCACTGAGTTCCGAGAT +
Preference number: 4 (lower is better)
Translates to: IFYTDMQSAGQIPEWSKLSSESS*ITEFRD
Trigger: ATCTCGGAACTCAGTGATGCAGGAACTCTCAGAGCT...AAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACAGTTCCTCCACATTCTaGGAATCTCCCAGCACCCAA +
Preference number: 4 (lower is better)
Translates to: QNASLEKLKVNPIYKNADSSSTF*ESPSTQ
Trigger: TTGGGTGCTGGGAGATTCCCAGAATGTGGAGGAACT...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGAACATGGCTCTTGCCTaGTCCAATCAATCCTTGACG +
Preference number: 4 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLNMALA*SNQSLT
Trigger: CGTCAAGGATTGATTGGACCAGGCAAGAGCCATGTT...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCACCTTTCTCCTCCACCTaGAAGCATACACACTCTGGG +
Preference number: 4 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEAPFSST*KHTHSG
Trigger: CCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGG...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACGTTCATGGTCAGGATTaGGACAGTGACATCAGCATC +
Preference number: 4 (lower is better)
Translates to: QNASLEKLKVNPIYKNADVHGQD*DSDISI
Trigger: GATGCTGATGTCACTGTCTCAATCCTGACCATGAAC...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGTTTGCAAAGTCTCCGTaGCAGCAAAACTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLFAKSP*QQNFSC
Trigger: GCAAGAGAAGTTTTGCTGTCACGGAGACTTTGCAAA...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTATGTAAAAGAGGAAAGTaGTTGGCACAGCTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: YLHEPGSYICSSSSEHALCKRGK*LAQLLN
Trigger: GTTCAGGAGCTGTGCCAAGCACTTTCCTCTTTTACA...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTAAATGAGAGCAAGTTCTaGTTGGATCATGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: YLHEPGSYICSSSSEHALNESKF*LDHGGC
Trigger: ACAGCCACCATGATCCAACCAGAACTTGCTCTCATT...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTAACATTGGCTTTCCCATaGGGTCATGTTGAAGATTCC +
Preference number: 4 (lower is better)
Translates to: YLHEPGSYICSSSSEHALTLAFP*GHVEDS
Trigger: GGAATCTTCAACATGACCCCATGGGAAAGCCAATGT...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCACATTTCCGTTCTTCCTaGAGCGGAGCGATTGCAAAC +
Preference number: 4 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEAHFRSS*SGAIAN
Trigger: GTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATG...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTAAGTTGTTTTCTGAGCTaGCGATGGTGGAACCTTTTA +
Preference number: 4 (lower is better)
Translates to: YLHEPGSYICSSSSEHALSCFLS*RWWNLL
Trigger: TAAAAGGTTCCACCATCGTCAGCTCAGAAAACAACT...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACTTCTATTTCGCCCCTTaGGAGTCAAACCAAATGGAC +
Preference number: 4 (lower is better)
Translates to: QNASLEKLKVNPIYKNADFYFAP*ESNQMD
Trigger: GTCCATTTGGTTTGACTCCCAAGGGGCGAAATAGAA...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTACAATGGTGGTCAAAATaGACAGACCAAATCCAATGC +
Preference number: 4 (lower is better)
Translates to: YLHEPGSYICSSSSEHALQWWSK*TDQIQC
Trigger: GCATTGGATTTGGTCTGTCCATTTTGACCACCATTG...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCATGTGTAATCTCTGGCTaGTGTGGAGCCAGTATTGCA +
Preference number: 4 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEACVISG*CGASIA
Trigger: TGCAATACTGGCTCCACACCAGCCAGAGATTACACA...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCAAATCCTTGGGAAGGATaGTGTAACTTGGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEANPWEG*CNLGSC
Trigger: ACATGACCCCAAGTTACATCATCCTTCCCAAGGATT...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGCTGTTTCCTCATTATTaGACTGTTTCATCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLLFPHY*TVSSVE
Trigger: CTCCACAGATGAAACAGTTCAATAATGAGGAAACAG...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACCAAAAACATGGCTCTTaGCTGGTCCAATCAATCCTT +
Preference number: 4 (lower is better)
Translates to: QNASLEKLKVNPIYKNADQKHGS*LVQSIL
Trigger: AAGGATTGATTGGACCAGGCAAGAGCCATGTTTTTG...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACAAATGGCCTAGTGTGTaGTGTGTAGAACATTTCACC +
Preference number: 4 (lower is better)
Translates to: QNASLEKLKVNPIYKNADKWPSV*CVEHFT
Trigger: GGTGAAATGTTCTACACACCACACACTAGGCCATTT...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCAACTTGTATCAGTCTTTaGGGGGCATTAGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEATCISL*GALDEA
Trigger: AGCCTCATCTAATGCCCCCCAAAGACTGATACAAGT...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR TCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACTTGACATTTGAGAACTaGCCCATATTCCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: QNASLEKLKVNPIYKNADLTFEN*PIFLSL
Trigger: AAGGGAAAGGAATATGGGTCAGTTCTCAAATGTCAA...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCACATAATCTTCAGCACTaGTTTCTCGGACAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEAHNLQH*FLGQFQ
Trigger: TTGGAACTGTCCGAGAAAGCAGTGCTGAAGATTATG...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTAGTCTTGAAATGCTGCTaGTTTTCCTCTATAAATGAT +
Preference number: 4 (lower is better)
Translates to: YLHEPGSYICSSSSEHALVLKCC*FSSIND
Trigger: ATCATTTATAGAGGAAAAGCAGCAGCATTTCAAGAC...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR GCA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACTTTTCTATACAGATATaGAAAGTGCAGGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: QNASLEKLKVNPIYKNADFSIQI*KVQGRF
Trigger: GAATCTGCCCTGCACTTTGCATATCTGTATAGAAAA...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp CCGCAGGGAGAAAGCGCGCCCCCTCCTGCGCCCGGCTCGCCCCTCTaGAGCCGCTGCCTGAGGTCTCCGCCTCCAGGTCCCGCGCGCAGC +
Preference number: 5 (lower is better)
Translates to: PQGESAPPPAPGSPL*SRCLRSPPPGPARS
Trigger: GCTGCGCGCGGGACCTGGAGGCGGAGACCTCAGGCAGCGGCTGCAGAGGGGCGAGCCGGGCGCAGGAGGGGGCGCGCTTTCTCCCTGCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp GAGGGCGCCGGGGACCGCCTAGTCCCTGGCTCCGGCTCATCCCTCTaGGCTCCTGCTCGGCTGTCGTCCGGAGCGCGGCTGGCCGCGCGG +
Preference number: 5 (lower is better)
Translates to: EGAGDRLVPGSGSSL*APARLSSGARLAAR
Trigger: CCGCGCGGCCAGCCGCGCTCCGGACGACAGCCGAGCAGGAGCCCAGAGGGATGAGCCGGAGCCAGGGACTAGGCGGTCCCCGGCGCCCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp CCACGGCAAATAGGAGGGCGTCCCGTGGCCACAGGGCCTCCGCCCTaGCGCCCTCCCCGGGCTTACGGGAGCCCGGCGGCCCCCGGCCAT +
Preference number: 5 (lower is better)
Translates to: PRQIGGRPVATGPPP*RPPRAYGSPAAPGH
Trigger: ATGGCCGGGGGCCGCCGGGCTCCCGTAAGCCCGGGGAGGGCGCCAGGGCGGAGGCCCTGTGGCCACGGGACGCCCTCCTATTTGCCGTGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp AGCGCCCGTTCCCTGCCCGCCCCATCTGCAGGGCGCCTCGGGCACTaGGTCCGGCCCCGCGAGGCGGCCGGGATGAGAAGCAGCCGGAGT +
Preference number: 5 (lower is better)
Translates to: SARSLPAPSAGRLGH*VRPREAAGMRSSRS
Trigger: ACTCCGGCTGCTTCTCATCCCGGCCGCCTCGCGGGGCCGGACGCAGTGCCCGAGGCGCCCTGCAGATGGGGCGGGCAGGGAACGGGCGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp CCCACCCTCACCGCGTGCCCGATGCGCTTGAGGATCTGGCAGGGCTaGGGGTGCGAGGAGGAGCTGGGCACCCCGGCCAGCACCAGTGCG +
Preference number: 5 (lower is better)
Translates to: PTLTACPMRLRIWQG*GCEEELGTPASTSA
Trigger: CGCACTGGTGCTGGCCGGGGTGCCCAGCTCCTCCTCGCACCCGCAGCCCTGCCAGATCCTCAAGCGCATCGGGCACGCGGTGAGGGTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp GCGGTGGTCCAGGGCTGCAAGTGCACCGCGCCCACCCTCACCGCGTaGCCGATGCGCTTGAGGATCTGGCAGGGCTGCGGGTGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: AVVQGCKCTAPTLTA*PMRLRIWQGCGCEE
Trigger: CTCCTCGCACCCGCAGCCCTGCCAGATCCTCAAGCGCATCGGGCACGCGGTGAGGGTGGGCGCGGTGCACTTGCAGCCCTGGACCACCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp CCACTCGGTGAAGCGGTCCCAGGAGCTGGAGCGGTCTCTAGGCCATaGAAGTTGGAGCGTAGCGCGCCTCCGGCAGTCTCAGATCCCGCT +
Preference number: 5 (lower is better)
Translates to: PLGEAVPGAGAVSRP*KLERSAPPAVSDPA
Trigger: AGCGGGATCTGAGACTGCCGGAGGCGCGCTACGCTCCAACTTGCATGGCCTAGAGACCGCTCCAGCTCCTGGGACCGCTTCACCGAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp GTGAAGCGGTCCCAGGAGCTGGAGCGGTCTCTAGGCCATGCAAGTTaGAGCGTAGCGCGCCTCCGGCAGTCTCAGATCCCGCTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: VKRSQELERSLGHAS*SVARLRQSQIPLPG
Trigger: ACCTGGGAGCGGGATCTGAGACTGCCGGAGGCGCGCTACGCTCCAACTTGCATGGCCTAGAGACCGCTCCAGCTCCTGGGACCGCTTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS TCA 90 bp ACAGACCCTGCTCAGCAGCCACCACAAACTCAGTCTCCTCATTACTaGGACCCGCAGGGAGAAAGCGCGCCCCCTCCTGCGCCCGGCTCG +
Preference number: 5 (lower is better)
Translates to: TDPAQQPPQTQSPHY*DPQGESAPPPAPGS
Trigger: CGAGCCGGGCGCAGGAGGGGGCGCGCTTTCTCCCTGCGGGTCTCAGTAATGAGGAGACTGAGTTTGTGGTGGCTGCTGAGCAGGGTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp CGGCCAGCACCAGTGCGCAGGGCGGCGGCAACAGCAGACAGACCCTaGTCAGCAGCCACCACAAACTCAGTCTCCTCATTACTGAGACCC +
Preference number: 5 (lower is better)
Translates to: RPAPVRRAAATADRP*SAATTNSVSSLLRP
Trigger: GGGTCTCAGTAATGAGGAGACTGAGTTTGTGGTGGCTGCTGAGCAGGGTCTGTCTGCTGTTGCCGCCGCCCTGCGCACTGGTGCTGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp ATTTCGCCCTGGCTCTGGGGGAAGGCGAGCAGCGCCGACACCCCTTaGACCACCACGGTATGGCACACACTTTGCAGGAAGGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: ISPWLWGKASSADTP*TTTVWHTLCRKEKG
Trigger: CCCTTTCTCCTTCCTGCAAAGTGTGTGCCATACCGTGGTGGTGCAAGGGGTGTCGGCGCTGCTCGCCTTCCCCCAGAGCCAGGGCGAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp AGGACTAAGCTGACCAAGTCGAGCTCCATCATTTCGCCCTGGCTCTaGGGGAAGGCGAGCAGCGCCGACACCCCTTGCACCACCACGGTA +
Preference number: 5 (lower is better)
Translates to: RTKLTKSSSIISPWL*GKASSADTPCTTTV
Trigger: TACCGTGGTGGTGCAAGGGGTGTCGGCGCTGCTCGCCTTCCCCCAGAGCCAGGGCGAAATGATGGAGCTCGACTTGGTCAGCTTAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp ATGTGCAGGACTAAGCTGACCAAGTCGAGCTCCATCATTTCGCCCTaGCTCTGGGGGAAGGCGAGCAGCGCCGACACCCCTTGCACCACC +
Preference number: 5 (lower is better)
Translates to: MCRTKLTKSSSIISP*LWGKASSADTPCTT
Trigger: GGTGGTGCAAGGGGTGTCGGCGCTGCTCGCCTTCCCCCAGAGCCAGGGCGAAATGATGGAGCTCGACTTGGTCAGCTTAGTCCTGCACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp TGCTTTCCCATTGGTGGTCCGCAAGGCAGGGAGCTCTCTTCTCCTTaGAGGGAGGGGGATGTCCTGGTGGATCCGGATGCCCAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: CFPIGGPQGRELSSP*REGDVLVDPDAQLV
Trigger: AACCAGCTGGGCATCCGGATCCACCAGGACATCCCCCTCCCTCCAAGGAGAAGAGAGCTCCCTGCCTTGCGGACCACCAATGGGAAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGAGTCGCCACCGCCGCTaGCTTCCTCGGAGGAGCAAC +
Preference number: 5 (lower is better)
Translates to: LESELERSCCCTLGEGEQSRHRR*LPRRSN
Trigger: GTTGCTCCTCCGAGGAAGCAAGCGGCGGTGGCGACT...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATGCGTGCCCGATGCGCTaGAGGATCTGGCAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDACPMR*RIWQGC
Trigger: GCAGCCCTGCCAGATCCTCAAGCGCATCGGGCACGC...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp AGCAGCGCCGACACCCCTTGCACCACCACGGTATGGCACACACTTTaGAGGAAGGAGAAAGGGTCACTGCTCCATGGCGAACTAGGGGAG +
Preference number: 5 (lower is better)
Translates to: SSADTPCTTTVWHTL*RKEKGSLLHGELGE
Trigger: CTCCCCTAGTTCGCCATGGAGCAGTGACCCTTTCTCCTTCCTGCAAAGTGTGTGCCATACCGTGGTGGTGCAAGGGGTGTCGGCGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp CGCAAGGCAGGGAGCTCTCTTCTCCTTGGAGGGAGGGGGATGTCCTaGTGGATCCGGATGCCCAGCTGGTTTTGTCCTTCCTCATCACTA +
Preference number: 5 (lower is better)
Translates to: RKAGSSLLLGGRGMS*WIRMPSWFCPSSSL
Trigger: TAGTGATGAGGAAGGACAAAACCAGCTGGGCATCCGGATCCACCAGGACATCCCCCTCCCTCCAAGGAGAAGAGAGCTCCCTGCCTTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp GGGAGGAGAAGGGCAAAAGTGGCAGATCGCCCAGGCCTGCCTCGATaGCCATCACTACTTCCAAAGACAGGTTGTAGGGTAGCAGCCCTT +
Preference number: 5 (lower is better)
Translates to: GRRRAKVADRPGLPR*PSLLPKTGCRVAAL
Trigger: AAGGGCTGCTACCCTACAACCTGTCTTTGGAAGTAGTGATGGCCATCGAGGCAGGCCTGGGCGATCTGCCACTTTTGCCCTTCTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGCCAAGCGGGTCCACATaGGCTTTCCCATGGGGTCAT +
Preference number: 5 (lower is better)
Translates to: LESELERSCCCTLGEGEQPSGST*AFPWGH
Trigger: ATGACCCCATGGGAAAGCCAATGTGGACCCGCTTGG...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTGGAGCTCTCTTCTCCTaGGAGGGAGGGGGATGTCCT +
Preference number: 5 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCGALFS*EGGGCP
Trigger: AGGACATCCCCCTCCCTCCAAGGAGAAGAGAGCTCC...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CCGGGCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCAGCTTCCCCACACCTTaGTCGATAGTTACAAAAGAG +
Preference number: 5 (lower is better)
Translates to: PGCTEVQGHAEHGGRVSSSFPTP*SIVTKE
Trigger: CTCTTTTGTAACTATCGACAAAGGTGTGGGGAAGCT...GCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp CTCTCCCGTGGAAACTCGTGGCGCACGATGCTGATCACTGGAATGTaGAGGACTAAGCTGACCAAGTCGAGCTCCATCATTTCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LSRGNSWRTMLITGM*RTKLTKSSSIISPW
Trigger: CCAGGGCGAAATGATGGAGCTCGACTTGGTCAGCTTAGTCCTGCACATTCCAGTGATCAGCATCGTGCGCCACGAGTTTCCACGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp GGTATGGCACACACTTTGCAGGAAGGAGAAAGGGTCACTGCTCCATaGCGAACTAGGGGAGGAGAAGGGCAAAAGTGGCAGATCGCCCAG +
Preference number: 5 (lower is better)
Translates to: GMAHTLQEGERVTAP*RTRGGEGQKWQIAQ
Trigger: CTGGGCGATCTGCCACTTTTGCCCTTCTCCTCCCCTAGTTCGCCATGGAGCAGTGACCCTTTCTCCTTCCTGCAAAGTGTGTGCCATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp ACCTGGCTCCGTGCAGTATTGATGCTAAAGGAAGTGACTGCCATGTaGGCAGTCCCTCTCAGGAGATCACCCACTAGCCCAGTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: TWLRAVLMLKEVTAM*AVPLRRSPTSPVQC
Trigger: GCACTGGACTGGGCTAGTGGGTGATCTCCTGAGAGGGACTGCCCACATGGCAGTCACTTCCTTTAGCATCAATACTGCACGGAGCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp AAGGCAGGGAGCTCTCTTCTCCTTGGAGGGAGGGGGATGTCCTGGTaGATCCGGATGCCCAGCTGGTTTTGTCCTTCCTCATCACTAAAG +
Preference number: 5 (lower is better)
Translates to: KAGSSLLLGGRGMSW*IRMPSWFCPSSSLK
Trigger: CTTTAGTGATGAGGAAGGACAAAACCAGCTGGGCATCCGGATCCACCAGGACATCCCCCTCCCTCCAAGGAGAAGAGAGCTCCCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp GATGTGCAGAGCCACAAAAATCCCCAGCCACATTGTCCAGTGGAGTaGCCACATGAAGGCTCCAATGGGAGCTGCTGTATCTCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: DVQSHKNPQPHCPVE*PHEGSNGSCCISGP
Trigger: AGGACCCGAGATACAGCAGCTCCCATTGGAGCCTTCATGTGGCCACTCCACTGGACAATGTGGCTGGGGATTTTTGTGGCTCTGCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp GCAGTGATGTGCAGAGCCACAAAAATCCCCAGCCACATTGTCCAGTaGAGTGGCCACATGAAGGCTCCAATGGGAGCTGCTGTATCTCGG +
Preference number: 5 (lower is better)
Translates to: AVMCRATKIPSHIVQ*SGHMKAPMGAAVSR
Trigger: CCGAGATACAGCAGCTCCCATTGGAGCCTTCATGTGGCCACTCCACTGGACAATGTGGCTGGGGATTTTTGTGGCTCTGCACATCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp TCACTGAGTTCCGAGATACATTTAGGGAGTCTGCTTTCCCATTGGTaGTCCGCAAGGCAGGGAGCTCTCTTCTCCTTGGAGGGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: SLSSEIHLGSLLSHW*SARQGALFSLEGGG
Trigger: TCCCCCTCCCTCCAAGGAGAAGAGAGCTCCCTGCCTTGCGGACCACCAATGGGAAAGCAGACTCCCTAAATGTATCTCGGAACTCAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp GCATCACTGAGTTCCGAGATACATTTAGGGAGTCTGCTTTCCCATTaGTGGTCCGCAAGGCAGGGAGCTCTCTTCTCCTTGGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: ASLSSEIHLGSLLSH*WSARQGALFSLEGG
Trigger: CCCTCCCTCCAAGGAGAAGAGAGCTCCCTGCCTTGCGGACCACCAATGGGAAAGCAGACTCCCTAAATGTATCTCGGAACTCAGTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS TCA 90 bp GAGCCACAAAAATCCCCAGCCACATTGTCCAGTGGAGTGGCCACATaGAGGCTCCAATGGGAGCTGCTGTATCTCGGGTCCTCACTAAGA +
Preference number: 5 (lower is better)
Translates to: EPQKSPATLSSGVAT*RLQWELLYLGSSLR
Trigger: TCTTAGTGAGGACCCGAGATACAGCAGCTCCCATTGGAGCCTTCATGTGGCCACTCCACTGGACAATGTGGCTGGGGATTTTTGTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp CTCCTTGGAGGGAGGGGGATGTCCTGGTGGATCCGGATGCCCAGCTaGTTTTGTCCTTCCTCATCACTAAAGATGTATTTCCGTCGGTTG +
Preference number: 5 (lower is better)
Translates to: LLGGRGMSWWIRMPS*FCPSSSLKMYFRRL
Trigger: CAACCGACGGAAATACATCTTTAGTGATGAGGAAGGACAAAACCAGCTGGGCATCCGGATCCACCAGGACATCCCCCTCCCTCCAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGCATTGGTCATCTACTTaGTGGATAGGCAGGGCGATC +
Preference number: 5 (lower is better)
Translates to: LESELERSCCCTLGEGEQHWSST*WIGRAI
Trigger: GATCGCCCTGCCTATCCACAAAGTAGATGACCAATG...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATTCTTTGAGGAGCGTGCATaGGTCATCTACTTTGTGGAT +
Preference number: 5 (lower is better)
Translates to: AAQRFRGTQSMVAESPAFFEERA*VIYFVD
Trigger: ATCCACAAAGTAGATGACCAATGCACGCTCCTCAAA...GAATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTAAGCCCCTGCTGCTGCTaGCTGCATCCTGGCCAGTGT +
Preference number: 5 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLSPCCC*LHPGQC
Trigger: ACACTGGCCAGGATGCAGCAAGCAGCAGCAGGGGCT...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACAAAGACCTCGACTGCTaGGGTCCCTGTGGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHKDLDC*GPCGCF
Trigger: GAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTT...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp TGGATTGAGGTACACCTGTACATCAGCCTTCCGGGCTGCACAGAGGTTCAGGGGAGGTTAGCGGTGATGTaGATGATAGAACCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: WIEVHLYISLPGCTEVQGRLAVM*MIEPRW
Trigger: CCACCTTGGTTCTATCATCAACATCACCGCTAACCT...CCCCTGAACCTCTGTGCAGCCCGGAAGGCTGATGTACAGGTGTACCTCAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACGAGAGCAAGTTCTGGTaGGATCATGGTGGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHESKFW*DHGGCG
Trigger: GCCACAGCCACCATGATCCAACCAGAACTTGCTCTC...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GCATTGGTCATCTACTTTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACAAATCCCCAGCCACATaGTCCAGTGGAGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: ALVIYFVDRQGDLACDHHKSPAT*SSGVAT
Trigger: TGTGGCCACTCCACTGGACAATGTGGCTGGGGATTT...GTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAAAGTAGATGACCAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGCTTCTATTTCGCCCCTaGGGAGTCAAACCAAATGGA +
Preference number: 5 (lower is better)
Translates to: LESELERSCCCTLGEGEQLLFRP*GVKPNG
Trigger: TCCATTTGGTTTGACTCCCAAGGGGCGAAATAGAAG...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCCAACATTTTGGAGGTTaGATGGCCACTGTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCQHFGG*MATVLP
Trigger: TGGCAGAACAGTGGCCATCAAACCTCCAAAATGTTG...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTGTGTTTGATGCCCATTaGCAAAGTCTCCGTGACAGC +
Preference number: 5 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCVFDAH*QSLRDS
Trigger: GCTGTCACGGAGACTTTGCAAATGGGCATCAAACAC...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GCTGCACAGAGGTTCAGGGGCACGCAGAGCATGGTGGCAGAGTCTCCAGCATTCCAATTTTATCTCTTGTaGGTAGTGCAGAGAAAGGGC +
Preference number: 5 (lower is better)
Translates to: AAQRFRGTQSMVAESPAFQFYLL*VVQRKG
Trigger: GCCCTTTCTCTGCACTACCAACAAGAGATAAAATTG...GAATGCTGGAGACTCTGCCACCATGCTCTGCGTGCCCCTGAACCTCTGTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGGAACCAAGGTGGAACTaGGAATTATTCTGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: LESELERSCCCTLGEGEQEPRWN*ELFWVR
Trigger: CCTTACCCAGAATAATTCCAAGTTCCACCTTGGTTC...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTCAGCTCCATAGCATCTaGTACGTAGTGCTCAAAGAC +
Preference number: 5 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCQLHSI*YVVLKD
Trigger: GTCTTTGAGCACTACGTACAAGATGCTATGGAGCTG...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTCCTAAGGCCACAACCTaGCTTTGCCTTTTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCPKATT*LCLFLS
Trigger: AGAGAGAAAAAGGCAAAGCAAGGTTGTGGCCTTAGG...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp AATGGACTCTTCCATTCATACAGAGTGAGGAAGACGGCAGTGATGTaGAGAGCCACAAAAATCCCCAGCCACATTGTCCAGTGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: NGLFHSYRVRKTAVM*RATKIPSHIVQWSG
Trigger: GCCACTCCACTGGACAATGTGGCTGGGGATTTTTGTGGCTCTGCACATCACTGCCGTCTTCCTCACTCTGTATGAATGGAAGAGTCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp CCAAACATCACCACTGTGGGTGTGCTGTTCTTAATACTCTCAAGCTaGATCTGTAGGAAGCTCAAGAGGTCCTGGGTGGAGGGGAGGTTA +
Preference number: 5 (lower is better)
Translates to: PNITTVGVLFLILSS*ICRKLKRSWVEGRL
Trigger: TAACCTCCCCTCCACCCAGGACCTCTTGAGCTTCCTACAGATCCAGCTTGAGAGTATTAAGAACAGCACACCCACAGTGGTGATGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp TTGTGGATAGGCAGGGCGATCTGGCATGTGATCACCACTGCTCAGAATGCCTCAACCACCCTGTACCACTaGTCATGGAGCATATCCATA +
Preference number: 5 (lower is better)
Translates to: LWIGRAIWHVITTAQNASTTLYH*SWSISI
Trigger: TATGGATATGCTCCATGACAAGTGGTACAGGGTGGT...TGAGGCATTCTGAGCAGTGGTGATCACATGCCAGATCGCCCTGCCTATCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATGGTGTGGAGCCAGTATaGCAGCTTGGATTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDGVEPV*QLGFVF
Trigger: AAAAACAAATCCAAGCTGCAATACTGGCTCCACACC...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCCTCTTTTCCACACGTTaGGTCTTGAAATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GMAKGQNLPKAVATYFWALFSTR*VLKCCC
Trigger: GCAGCAGCATTTCAAGACCAAACGTGTGGAAAAGAG...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCGATGCCCAGCTGGTTTaGTCCTTCCTCATCACTAAA +
Preference number: 5 (lower is better)
Translates to: GMAKGQNLPKAVATYFWADAQLV*SFLITK
Trigger: TTTAGTGATGAGGAAGGACAAAACCAGCTGGGCATC...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCACTCACAAGTCCGACTaGTCCTTTGATACTCCTCCA +
Preference number: 5 (lower is better)
Translates to: GMAKGQNLPKAVATYFWATHKSD*SFDTPP
Trigger: TGGAGGAGTATCAAAGGACAAGTCGGACTTGTGAGT...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCGCATTTCAAGCAATGTaGATGGCAGTAAGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAAFQAM*MAVSLL
Trigger: CAGCAGGCTTACTGCCATCAACATTGCTTGAAATGC...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp ATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATGGTCGAAGCTTTCTAGGCCATGCAAGTaGGAGCGTAGCGCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: IFYTDMQSAGQIPEWSKLSRPCK*ERSAPP
Trigger: CGGAGGCGCGCTACGCTCCAACTTGCATGGCCTAGA...AAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTAGAGAGTGAGCTTGAGAGGAGCTGCTGCTGCACTTTAGGCGAGGGAGAGCAGTTCCAGATGAAAAAGTaGTTTTCTGAGCTGACGATG +
Preference number: 5 (lower is better)
Translates to: LESELERSCCCTLGEGEQFQMKK*FSELTM
Trigger: CATCGTCAGCTCAGAAAACAACTTTTTCATCTGGAA...CTGCTCTCCCTCGCCTAAAGTGCAGCAGCAGCTCCTCTCAAGCTCACTCTCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGCACATTAAAGACCTCGACTGCTTGGGTCCCTGTGGCTGCTTCACTTGGCTGTTCAAGTGTAGCTTACTaGGATGTTGGAAGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: GTLKTSTAWVPVAASLGCSSVAY*DVGSGF
Trigger: AAACCCACTTCCAACATCCAAGTAAGCTACACTTGA...ACAGCCAAGTGAAGCAGCCACAGGGACCCAAGCAGTCGAGGTCTTTAATGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGCATCTCTGGGAAACTTaGTCTCACATAATCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQHLWET*SHIIFS
Trigger: GCTGAAGATTATGTGAGACAAAGTTTCCCAGAGATG...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTAACAGCAAAACTTCTCTaGCCACAGGGAACCACCCTG +
Preference number: 5 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLTAKLL*PQGTTL
Trigger: CAGGGTGGTTCCCTGTGGCAAGAGAAGTTTTGCTGT...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATCCATATTCCTTTCCCTaGCTGCCTAAACTTGATATG +
Preference number: 5 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDPYSFP*LPKLDM
Trigger: CATATCAAGTTTAGGCAGCAAGGGAAAGGAATATGG...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp GCGGTGATGTTGATGATAGAACCAAGGTGGAACTTGGAATTATTCTaGGTAAGGAGGAGGAAGTCGGTGATGTTCCAGTCTTCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: AVMLMIEPRWNLELF*VRRRKSVMFQSSWH
Trigger: GTGCCAGGAAGACTGGAACATCACCGACTTCCTCCTCCTTACCCAGAATAATTCCAAGTTCCACCTTGGTTCTATCATCAACATCACCGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp TTCTTAATACTCTCAAGCTGGATCTGTAGGAAGCTCAAGAGGTCCTaGGTGGAGGGGAGGTTAGCGGTGATGTTGATGATAGAACCAAGG +
Preference number: 5 (lower is better)
Translates to: FLILSSWICRKLKRS*VEGRLAVMLMIEPR
Trigger: CCTTGGTTCTATCATCAACATCACCGCTAACCTCCCCTCCACCCAGGACCTCTTGAGCTTCCTACAGATCCAGCTTGAGAGTATTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp GTAGCAGCAGCCTGTATACTATGTGCTCACCAATGGTGGTCAAAATaGACAGACCAAATCCAATGCACAGCAGCACAAAGAGCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: VAAACILCAHQWWSK*TDQIQCTAAQRAQR
Trigger: TCTCTGGGCTCTTTGTGCTGCTGTGCATTGGATTTGGTCTGTCCATTTTGACCACCATTGGTGAGCACATAGTATACAGGCTGCTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCACAGCGCCGACACCCCTaGCACCACCACGGTATGGCA +
Preference number: 5 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEAQRRHP*HHHGMA
Trigger: TGCCATACCGTGGTGGTGCAAGGGGTGTCGGCGCTG...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATAGCAACAAGCTAAAATaGTACCAGTTGTTCATGGTC +
Preference number: 5 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDSNKLK*YQLFMV
Trigger: GACCATGAACAACTGGTACAATTTTAGCTTGTTGCT...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGGAGATTCCCCTTTCTCCTCCACCTGGAAGCATACACACTCTGGGGCCTTGATTGCAGTCAGCATCTATaGACACTTCATAATCCAGAA +
Preference number: 5 (lower is better)
Translates to: GRFPFLLHLEAYTLWGLDCSQHL*TLHNPE
Trigger: TTCTGGATTATGAAGTGTCAATAGATGCTGACTGCA...ATCAAGGCCCCAGAGTGTGTATGCTTCCAGGTGGAGGAGAAAGGGGAATCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp TCTGCTTGGCACTTGCTCCGCTTACCACTTTTCTGGCTGGAAGGGAAGCAGCAGAGCCAGTATTGCAGCTaGGATTTGTTTTTGATTCGT +
Preference number: 5 (lower is better)
Translates to: SAWHLLRLPLFWLEGKQQSQYCS*DLFLIR
Trigger: ACGAATCAAAAACAAATCCAAGCTGCAATACTGGCT...CTGCTGCTTCCCTTCCAGCCAGAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CAAGCAATGTTGATGGCAGTAAGCCTGCTGTCAGCCCCTGCTGCTGCTTGCTGCTGGTCCAATCAATCCTaGACGTTTATGATACTAATG +
Preference number: 5 (lower is better)
Translates to: QAMLMAVSLLSAPAAACCWSNQS*TFMILM
Trigger: CATTAGTATCATAAACGTCAAGGATTGATTGGACCA...GCAGCAAGCAGCAGCAGGGGCTGACAGCAGGCTTACTGCCATCAACATTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGATCTTCCAAAGGCAGTaGCAACCTACTTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSIFQRQ*QPTSGP
Trigger: AGGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGAT...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGGATGGCTAAGGGGCAAAATCTTCCAAAGGCAGTTGCAACCTACTTCTGGGCCCCTCTGAAAGTGGTATaGGCTAGAAACCTTGATAAA +
Preference number: 5 (lower is better)
Translates to: GMAKGQNLPKAVATYFWAPLKVV*ARNLDK
Trigger: TTTATCAAGGTTTCTAGCCAATACCACTTTCAGAGG...GGCCCAGAAGTAGGTTGCAACTGCCTTTGGAAGATTTTGCCCCTTAGCCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGTGGCTCCGTGCAGTATaGATGCTAAAGGAAGTGACT +
Preference number: 5 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSWLRAV*MLKEVT
Trigger: AGTCACTTCCTTTAGCATCAATACTGCACGGAGCCA...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GCTTCGTTTCACCACAAGCAATTATGGTTTTTCTTTATTCAGAACATAGAGGCAGCGGTCAATGGAGAGTaGGGTGGGAGGCCAATGCCG +
Preference number: 5 (lower is better)
Translates to: ASFHHKQLWFFFIQNIEAAVNGE*GGRPMP
Trigger: CGGCATTGGCCTCCCACCCAACTCTCCATTGACCGC...TGCCTCTATGTTCTGAATAAAGAAAAACCATAATTGCTTGTGGTGAAACGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTAAGCCCAGAGAAGTGTTaGATGCCCATTTGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLSPEKC*MPICKV
Trigger: GACTTTGCAAATGGGCATCAAACACTTCTCTGGGCT...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACGAGTCTGCTTTCCCATaGGTGGTCCGCAAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QNASLEKLKVNPIYKNADESAFP*VVRKAG
Trigger: CCCTGCCTTGCGGACCACCAATGGGAAAGCAGACTC...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTCACAAGACAGCATTTCCGTTCTTCCTGGAGCGGAGCGATTGCAAACACATTATTCCTCCAAAGATGTTaGAGGAGCGTGCATTGGTCA +
Preference number: 5 (lower is better)
Translates to: LTRQHFRSSWSGAIANTLFLQRC*RSVHWS
Trigger: TGACCAATGCACGCTCCTCAAACATCTTTGGAGGAA...TAATGTGTTTGCAATCGCTCCGCTCCAGGAAGAACGGAAATGCTGTCTTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp GGGCACAAGCCTTCATCATCTACCTCCCTTGTGAAGACAAAAGGATaGTCAATCAGGGTAACCACTCTCAAGTGTAGCTTACTTGGATGT +
Preference number: 5 (lower is better)
Translates to: GHKPSSSTSLVKTKG*SIRVTTLKCSLLGC
Trigger: ACATCCAAGTAAGCTACACTTGAGAGTGGTTACCCTGATTGAGCATCCTTTTGTCTTCACAAGGGAGGTAGATGATGAAGGCTTGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp GGAGAAGACTTTACTTCTATTTCGCCCCTTGGGAGTCAAACCAAATaGACTCTTCCATTCATACAGAGTGAGGAAGACGGCAGTGATGTG +
Preference number: 5 (lower is better)
Translates to: GEDFTSISPLGSQTK*TLPFIQSEEDGSDV
Trigger: CACATCACTGCCGTCTTCCTCACTCTGTATGAATGGAAGAGTCCATTTGGTTTGACTCCCAAGGGGCGAAATAGAAGTAAAGTCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CAGAATGCCTCACTAGAGAAGCTTAAGGTAAATCCGATATACAAAAATGCAGACTCCACGCGGTTCAGGTaGTCCACGGCAAATAGGAGG +
Preference number: 5 (lower is better)
Translates to: QNASLEKLKVNPIYKNADSTRFR*STANRR
Trigger: CCTCCTATTTGCCGTGGACAACCTGAACCGCGTGGA...GTCTGCATTTTTGTATATCGGATTTACCTTAAGCTTCTCTAGTGAGGCATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp GGCTGGAGGTTTTGGGATTTCTATGCTAAGCGATGGGTGACTGCTGATCTGAAAGGGGTGGCTGGAACATaGTACCTTCTCATATATTCA +
Preference number: 5 (lower is better)
Translates to: GWRFWDFYAKRWVTADLKGVAGT*YLLIYS
Trigger: TGAATATATGAGAAGGTACAATGTTCCAGCCACCCC...TTTCAGATCAGCAGTCACCCATCGCTTAGCATAGAAATCCCAAAACCTCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGTCAAAAACATGGCTCTaGCCTGGTCCAATCAATCCT +
Preference number: 5 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSSKTWL*PGPINP
Trigger: AGGATTGATTGGACCAGGCAAGAGCCATGTTTTTGA...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGTCCCATGGGGTCATGTaGAAGATTCCAGATGAAAAA +
Preference number: 5 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSSHGVM*KIPDEK
Trigger: TTTTTCATCTGGAATCTTCAACATGACCCCATGGGA...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp CTGGTGAAAAGGTTAACGGCAGCTGGGGTTATCTGGTTATTCACAGATCTCTCGACACACTCTGGGGCCTaGATTATTCTTATTTACACG +
Preference number: 5 (lower is better)
Translates to: LVKRLTAAGVIWLFTDLSTHSGA*IILIYT
Trigger: CGTGTAAATAAGAATAATCAAGGCCCCAGAGTGTGT...CGAGAGATCTGTGAATAACCAGATAACCCCAGCTGCCGTTAACCTTTTCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS TCA 90 bp GGTCATGTATTCCAGAAAGCTCTTCATAGATCTTCTCACCTACCATaGCAGCAGCCAAGTTTGCCGTGTATGTGGAAAGGCAAAACATAC +
Preference number: 5 (lower is better)
Translates to: GHVFQKALHRSSHLP*QQPSLPCMWKGKTY
Trigger: GTATGTTTTGCCTTTCCACATACACGGCAAACTTGGCTGCTGTCATGGTAGGTGAGAAGATCTATGAAGAGCTTTCTGGAATACATGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp ATTCATGCATCTCTGGGAAACTTTGTCTCACATAATCTTCAGCACTaGTTTCTCGGACAGTTCCAAAGCGGAATCCTTGGGAAGGATGAT +
Preference number: 5 (lower is better)
Translates to: IHASLGNFVSHNLQH*FLGQFQSGILGKDD
Trigger: ATCATCCTTCCCAAGGATTCCGCTTTGGAACTGTCCGAGAAAGCAGTGCTGAAGATTATGTGAGACAAAGTTTCCCAGAGATGCATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 90 bp CTAGTTTCTCTGGATCATTCTTCAGATACTCCACTCCATCAGGGGTaGCTGGAACATTGTACCTTCTCATATATTCATGCATCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LVSLDHSSDTPLHQG*LEHCTFSYIHASLG
Trigger: TCCCAGAGATGCATGAATATATGAGAAGGTACAATGTTCCAGCCACCCCTGATGGAGTGGAGTATCTGAAGAATGATCCAGAGAAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTATGTTCTGCTTGGCACTaGCTCCGCTTACCACTTTTC +
Preference number: 5 (lower is better)
Translates to: YLHEPGSYICSSSSEHALCSAWH*LRLPLF
Trigger: GAAAAGTGGTAAGCGGAGCAAGTGCCAAGCAGAACA...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 90 bp TTGGATTTGTTTTTGATTCGTGGTAGCAGCAGCCTGTATACTATGTaGTCACCAATGGTGGTCAAAATGGACAGACCAAATCCAATGCAC +
Preference number: 5 (lower is better)
Translates to: LDLFLIRGSSSLYTM*SPMVVKMDRPNPMH
Trigger: GTGCATTGGATTTGGTCTGTCCATTTTGACCACCATTGGTGAGCACATAGTATACAGGCTGCTGCTACCACGAATCAAAAACAAATCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGATTAGCTCGGATATGTaGGCGGTCAATGGAGAGTTG +
Preference number: 5 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLISSDM*AVNGEL
Trigger: CAACTCTCCATTGACCGCCAACATATCCGAGCTAAT...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp TATTTACACGAACCAGGTAGCTATATCTGTTCCAGCTCATCTGAGCATGCTTTACTAAAATTGTACCAGTaGTTCATGGTCAGGATTGAG +
Preference number: 5 (lower is better)
Translates to: YLHEPGSYICSSSSEHALLKLYQ*FMVRIE
Trigger: CTCAATCCTGACCATGAACAACTGGTACAATTTTAG...TAAAGCATGCTCAGATGAGCTGGAACAGATATAGCTACCTGGTTCGTGTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp ATTTTCTATACAGATATGCAAAGTGCAGGGCAGATTCCTGAATGGTCGAAGCTTTATTGCAGCTTGGATTaGTTTTTGATTCGTGGTAGC +
Preference number: 5 (lower is better)
Translates to: IFYTDMQSAGQIPEWSKLYCSLD*FLIRGS
Trigger: GCTACCACGAATCAAAAACAAATCCAAGCTGCAATA...AAGCTTCGACCATTCAGGAATCTGCCCTGCACTTTGCATATCTGTATAGAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS-3UTR CAA 90 bp ATAGAAACTGAAGATGGAAAAGACCTGAGGACATCTAATCCATCCATGTGGTTGGGATGGGGGATTGACTaGATTTTCTATACAGATATG +
Preference number: 5 (lower is better)
Translates to: IETEDGKDLRTSNPSMWLGWGID*IFYTDM
Trigger: CATATCTGTATAGAAAATCAAGTCAATCCCCCATCC...CAACCACATGGATGGATTAGATGTCCTCAGGTCTTTTCCATCTTCAGTTTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp CCCCCTCCTGCGCCCGGCTCGCCCCTCTGCAGCCGCTaGCTGAGGTCTCCGCCTCCAGGTCCCGCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: PPPAPGSPLCSR*LRSPPPGPARS
Trigger: GCTGCGCGCGGGACCTGGAGGCGGAGACCTCAGGCAGCGGCTGCAGAGGGGCGAGCCGGGCGCAGGAGGGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp ATAGGAGGGCGTCCCGTGGCCACAGGGCCTCCGCCCTaGCGCCCTCCCCGGGCTTACGGGAGCCCGGCGGCC +
Preference number: 6 (lower is better)
Translates to: IGGRPVATGPPP*RPPRAYGSPAA
Trigger: GGCCGCCGGGCTCCCGTAAGCCCGGGGAGGGCGCCAGGGCGGAGGCCCTGTGGCCACGGGACGCCCTCCTAT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp TCCCTGCCCGCCCCATCTGCAGGGCGCCTCGGGCACTaGGTCCGGCCCCGCGAGGCGGCCGGGATGAGAAGC +
Preference number: 6 (lower is better)
Translates to: SLPAPSAGRLGH*VRPREAAGMRS
Trigger: GCTTCTCATCCCGGCCGCCTCGCGGGGCCGGACGCAGTGCCCGAGGCGCCCTGCAGATGGGGCGGGCAGGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp CGGCGCCTGTCACCCGCAGCTGGAGCGCCCGTTCCCTaGCCGCCCCATCTGCAGGGCGCCTCGGGCACTGCG +
Preference number: 6 (lower is better)
Translates to: RRLSPAAGAPVP*PPHLQGASGTA
Trigger: CGCAGTGCCCGAGGCGCCCTGCAGATGGGGCGGGCAGGGAACGGGCGCTCCAGCTGCGGGTGACAGGCGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp CCTAGTCCCTGGCTCCGGCTCATCCCTCTGGGCTCCTaGTCGGCTGTCGTCCGGAGCGCGGCTGGCCGCGCG +
Preference number: 6 (lower is better)
Translates to: PSPWLRLIPLGS*SAVVRSAAGRA
Trigger: CGCGCGGCCAGCCGCGCTCCGGACGACAGCCGAGCAGGAGCCCAGAGGGATGAGCCGGAGCCAGGGACTAGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS TCA 72 bp GCACCGCGCCCACCCTCACCGCGTGCCCGATGCGCTTaGGGATCTGGCAGGGCTGCGGGTGCGAGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: APRPPSPRARCA*GSGRAAGARRS
Trigger: GCTCCTCCTCGCACCCGCAGCCCTGCCAGATCCTCAAGCGCATCGGGCACGCGGTGAGGGTGGGCGCGGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp GGGGACCGCCTAGTCCCTGGCTCCGGCTCATCCCTCTaGGCTCCTGCTCGGCTGTCGTCCGGAGCGCGGCTG +
Preference number: 6 (lower is better)
Translates to: GDRLVPGSGSSL*APARLSSGARL
Trigger: CAGCCGCGCTCCGGACGACAGCCGAGCAGGAGCCCAGAGGGATGAGCCGGAGCCAGGGACTAGGCGGTCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp CAGGGCTGCAAGTGCACCGCGCCCACCCTCACCGCGTaGCCGATGCGCTTGAGGATCTGGCAGGGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: QGCKCTAPTLTA*PMRLRIWQGCG
Trigger: CCCGCAGCCCTGCCAGATCCTCAAGCGCATCGGGCACGCGGTGAGGGTGGGCGCGGTGCACTTGCAGCCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 90 bp GGTGAAGCGGTCCCAGGAGCTGGAGCGGTCTCTAGGCCATGCAAGTaGGAGCGTAGCGCGCCTCCGGCAGTCTCAGATCCCGCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: GEAVPGAGAVSRPCK*ERSAPPAVSDPAPR
Trigger: CCTGGGAGCGGGATCTGAGACTGCCGGAGGCGCGCTACGCTCCAACTTGCATGGCCTAGAGACCGCTCCAGCTCCTGGGACCGCTTCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp GAAGCGGTCCCAGGAGCTGGAGCGGTCTCTAGGCCATaGAAGTTGGAGCGTAGCGCGCCTCCGGCAGTCTCA +
Preference number: 6 (lower is better)
Translates to: EAVPGAGAVSRP*KLERSAPPAVS
Trigger: TGAGACTGCCGGAGGCGCGCTACGCTCCAACTTGCATGGCCTAGAGACCGCTCCAGCTCCTGGGACCGCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp TCCCAGGAGCTGGAGCGGTCTCTAGGCCATGCAAGTTaGAGCGTAGCGCGCCTCCGGCAGTCTCAGATCCCG +
Preference number: 6 (lower is better)
Translates to: SQELERSLGHAS*SVARLRQSQIP
Trigger: CGGGATCTGAGACTGCCGGAGGCGCGCTACGCTCCAACTTGCATGGCCTAGAGACCGCTCCAGCTCCTGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 72 bp GTCCCAGGAGCTGGAGCGGTCTCTAGGCCATGCAAGTaGGAGCGTAGCGCGCCTCCGGCAGTCTCAGATCCC +
Preference number: 6 (lower is better)
Translates to: VPGAGAVSRPCK*ERSAPPAVSDP
Trigger: GGGATCTGAGACTGCCGGAGGCGCGCTACGCTCCAACTTGCATGGCCTAGAGACCGCTCCAGCTCCTGGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp TGGCTCTGGGGGAAGGCGAGCAGCGCCGACACCCCTTaGACCACCACGGTATGGCACACACTTTGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: WLWGKASSADTP*TTTVWHTLCRK
Trigger: CTTCCTGCAAAGTGTGTGCCATACCGTGGTGGTGCAAGGGGTGTCGGCGCTGCTCGCCTTCCCCCAGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 72 bp CTGGCTCTGGGGGAAGGCGAGCAGCGCCGACACCCCTaGCACCACCACGGTATGGCACACACTTTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: LALGEGEQRRHP*HHHGMAHTLQE
Trigger: TTCCTGCAAAGTGTGTGCCATACCGTGGTGGTGCAAGGGGTGTCGGCGCTGCTCGCCTTCCCCCAGAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 90 bp CATTTCGCCCTGGCTCTGGGGGAAGGCGAGCAGCGCCGACACCCCTaGCACCACCACGGTATGGCACACACTTTGCAGGAAGGAGAAAGG +
Preference number: 6 (lower is better)
Translates to: HFALALGEGEQRRHP*HHHGMAHTLQEGER
Trigger: CCTTTCTCCTTCCTGCAAAGTGTGTGCCATACCGTGGTGGTGCAAGGGGTGTCGGCGCTGCTCGCCTTCCCCCAGAGCCAGGGCGAAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 90 bp CTGCTTTCCCATTGGTGGTCCGCAAGGCAGGGAGCTCTCTTCTCCTaGGAGGGAGGGGGATGTCCTGGTGGATCCGGATGCCCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: LLSHWWSARQGALFS*EGGGCPGGSGCPAG
Trigger: ACCAGCTGGGCATCCGGATCCACCAGGACATCCCCCTCCCTCCAAGGAGAAGAGAGCTCCCTGCCTTGCGGACCACCAATGGGAAAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS TCA 72 bp GCTCAGCAGCCACCACAAACTCAGTCTCCTCATTACTaGGACCCGCAGGGAGAAAGCGCGCCCCCTCCTGCG +
Preference number: 6 (lower is better)
Translates to: AQQPPQTQSPHY*DPQGESAPPPA
Trigger: CGCAGGAGGGGGCGCGCTTTCTCCCTGCGGGTCTCAGTAATGAGGAGACTGAGTTTGTGGTGGCTGCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp ACTAAGCTGACCAAGTCGAGCTCCATCATTTCGCCCTaGCTCTGGGGGAAGGCGAGCAGCGCCGACACCCCT +
Preference number: 6 (lower is better)
Translates to: TKLTKSSSIISP*LWGKASSADTP
Trigger: AGGGGTGTCGGCGCTGCTCGCCTTCCCCCAGAGCCAGGGCGAAATGATGGAGCTCGACTTGGTCAGCTTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 72 bp CATTGGTGGTCCGCAAGGCAGGGAGCTCTCTTCTCCTaGGAGGGAGGGGGATGTCCTGGTGGATCCGGATGC +
Preference number: 6 (lower is better)
Translates to: HWWSARQGALFS*EGGGCPGGSGC
Trigger: GCATCCGGATCCACCAGGACATCCCCCTCCCTCCAAGGAGAAGAGAGCTCCCTGCCTTGCGGACCACCAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp TGCGGAAAAGAAGCCAAATCCACCTTCCTCCACTGTTaGCCACCCTCCTGCAGGCTCCCCCAGCGCCGACTT +
Preference number: 6 (lower is better)
Translates to: CGKEAKSTFLHC*PPSCRLPQRRL
Trigger: AAGTCGGCGCTGGGGGAGCCTGCAGGAGGGTGGCCAACAGTGGAGGAAGGTGGATTTGGCTTCTTTTCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp GGGAGCTCTCTTCTCCTTGGAGGGAGGGGGATGTCCTaGTGGATCCGGATGCCCAGCTGGTTTTGTCCTTCC +
Preference number: 6 (lower is better)
Translates to: GSSLLLGGRGMS*WIRMPSWFCPS
Trigger: GGAAGGACAAAACCAGCTGGGCATCCGGATCCACCAGGACATCCCCCTCCCTCCAAGGAGAAGAGAGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 90 bp GAGCAGCGCCGACACCCCTTGCACCACCACGGTATGGCACACACTTaGCAGGAAGGAGAAAGGGTCACTGCTCCATGGCGAACTAGGGGA +
Preference number: 6 (lower is better)
Translates to: EQRRHPLHHHGMAHT*QEGERVTAPWRTRG
Trigger: TCCCCTAGTTCGCCATGGAGCAGTGACCCTTTCTCCTTCCTGCAAAGTGTGTGCCATACCGTGGTGGTGCAAGGGGTGTCGGCGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp TTTCCTTTTCTGCCCAGGCGAGACCCACTTATTTCCTaGGGTCGCGTTGGAGAGGGCTTTCACGCCCGGGGT +
Preference number: 6 (lower is better)
Translates to: FPFLPRRDPLIS*GRVGEGFHARG
Trigger: ACCCCGGGCGTGAAAGCCCTCTCCAACGCGACCCCAGGAAATAAGTGGGTCTCGCCTGGGCAGAAAAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp AGCTCTCTTCTCCTTGGAGGGAGGGGGATGTCCTGGTaGATCCGGATGCCCAGCTGGTTTTGTCCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: SSLLLGGRGMSW*IRMPSWFCPSS
Trigger: TGAGGAAGGACAAAACCAGCTGGGCATCCGGATCCACCAGGACATCCCCCTCCCTCCAAGGAGAAGAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS TCA 72 bp AAATCCCCAGCCACATTGTCCAGTGGAGTGGCCACATaGAGGCTCCAATGGGAGCTGCTGTATCTCGGGTCC +
Preference number: 6 (lower is better)
Translates to: KSPATLSSGVAT*RLQWELLYLGS
Trigger: GGACCCGAGATACAGCAGCTCCCATTGGAGCCTTCATGTGGCCACTCCACTGGACAATGTGGCTGGGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp GGAGGAGAAGGGCAAAAGTGGCAGATCGCCCAGGCCTaGCTCGATGGCCATCACTACTTCCAAAGACAGGTT +
Preference number: 6 (lower is better)
Translates to: GGEGQKWQIAQA*LDGHHYFQRQV
Trigger: AACCTGTCTTTGGAAGTAGTGATGGCCATCGAGGCAGGCCTGGGCGATCTGCCACTTTTGCCCTTCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 90 bp GGGAAGCAGTGTGGTCACCTAGGACTCACAAGTCCGACTTGTCCTTaGATACTCCTCCAGCTCCGTTTTCCTGCTCACAGCCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GKQCGHLGLTSPTCP*ILLQLRFPAHSQLQ
Trigger: CTGCAGCTGGCTGTGAGCAGGAAAACGGAGCTGGAGGAGTATCAAAGGACAAGTCGGACTTGTGAGTCCTAGGTGACCACACTGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp AGGGCAAAAGTGGCAGATCGCCCAGGCCTGCCTCGATaGCCATCACTACTTCCAAAGACAGGTTGTAGGGTA +
Preference number: 6 (lower is better)
Translates to: RAKVADRPGLPR*PSLLPKTGCRV
Trigger: TACCCTACAACCTGTCTTTGGAAGTAGTGATGGCCATCGAGGCAGGCCTGGGCGATCTGCCACTTTTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 90 bp TGCATCACTGAGTTCCGAGATACATTTAGGGAGTCTGCTTTCCCATaGGTGGTCCGCAAGGCAGGGAGCTCTCTTCTCCTTGGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: CITEFRDTFRESAFP*VVRKAGSSLLLGGR
Trigger: CCTCCCTCCAAGGAGAAGAGAGCTCCCTGCCTTGCGGACCACCAATGGGAAAGCAGACTCCCTAAATGTATCTCGGAACTCAGTGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp CGTGCAGTATTGATGCTAAAGGAAGTGACTGCCATGTaGGCAGTCCCTCTCAGGAGATCACCCACTAGCCCA +
Preference number: 6 (lower is better)
Translates to: RAVLMLKEVTAM*AVPLRRSPTSP
Trigger: TGGGCTAGTGGGTGATCTCCTGAGAGGGACTGCCCACATGGCAGTCACTTCCTTTAGCATCAATACTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp AGCCACAAAAATCCCCAGCCACATTGTCCAGTGGAGTaGCCACATGAAGGCTCCAATGGGAGCTGCTGTATC +
Preference number: 6 (lower is better)
Translates to: SHKNPQPHCPVE*PHEGSNGSCCI
Trigger: GATACAGCAGCTCCCATTGGAGCCTTCATGTGGCCACTCCACTGGACAATGTGGCTGGGGATTTTTGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp TCCGAGATACATTTAGGGAGTCTGCTTTCCCATTGGTaGTCCGCAAGGCAGGGAGCTCTCTTCTCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: SEIHLGSLLSHW*SARQGALFSLE
Trigger: CTCCAAGGAGAAGAGAGCTCCCTGCCTTGCGGACCACCAATGGGAAAGCAGACTCCCTAAATGTATCTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 90 bp TGGAGGGAGGGGGATGTCCTGGTGGATCCGGATGCCCAGCTGGTTTaGTCCTTCCTCATCACTAAAGATGTATTTCCGTCGGTTGTCATG +
Preference number: 6 (lower is better)
Translates to: WREGDVLVDPDAQLV*SFLITKDVFPSVVM
Trigger: CATGACAACCGACGGAAATACATCTTTAGTGATGAGGAAGGACAAAACCAGCTGGGCATCCGGATCCACCAGGACATCCCCCTCCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp GGAAACTCGTGGCGCACGATGCTGATCACTGGAATGTaGAGGACTAAGCTGACCAAGTCGAGCTCCATCATT +
Preference number: 6 (lower is better)
Translates to: GNSWRTMLITGM*RTKLTKSSSII
Trigger: AATGATGGAGCTCGACTTGGTCAGCTTAGTCCTGCACATTCCAGTGATCAGCATCGTGCGCCACGAGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp GTGGAAGAGTCATTAGTCATGGGGTCTAGACAGAGTTaGCCAGCAGGGCACAAGCCTTCATCATCTACCTCC +
Preference number: 6 (lower is better)
Translates to: VEESLVMGSRQS*PAGHKPSSSTS
Trigger: GGAGGTAGATGATGAAGGCTTGTGCCCTGCTGGCCAACTCTGTCTAGACCCCATGACTAATGACTCTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp GGGAGGGGGATGTCCTGGTGGATCCGGATGCCCAGCTaGTTTTGTCCTTCCTCATCACTAAAGATGTATTTC +
Preference number: 6 (lower is better)
Translates to: GRGMSWWIRMPS*FCPSSSLKMYF
Trigger: GAAATACATCTTTAGTGATGAGGAAGGACAAAACCAGCTGGGCATCCGGATCCACCAGGACATCCCCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp AGTTCCGAGATACATTTAGGGAGTCTGCTTTCCCATTaGTGGTCCGCAAGGCAGGGAGCTCTCTTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: SSEIHLGSLLSH*WSARQGALFSL
Trigger: CAAGGAGAAGAGAGCTCCCTGCCTTGCGGACCACCAATGGGAAAGCAGACTCCCTAAATGTATCTCGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 72 bp CTGATTAGCTCGGATATGTTGGCGGTCAATGGAGAGTaGGGTGGGAGGCCAATGCCGTATCCTTCTATGGCA +
Preference number: 6 (lower is better)
Translates to: LISSDMLAVNGE*GGRPMPYPSMA
Trigger: TGCCATAGAAGGATACGGCATTGGCCTCCCACCCAACTCTCCATTGACCGCCAACATATCCGAGCTAATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 72 bp GGGGATGTCCTGGTGGATCCGGATGCCCAGCTGGTTTaGTCCTTCCTCATCACTAAAGATGTATTTCCGTCG +
Preference number: 6 (lower is better)
Translates to: GDVLVDPDAQLV*SFLITKDVFPS
Trigger: CGACGGAAATACATCTTTAGTGATGAGGAAGGACAAAACCAGCTGGGCATCCGGATCCACCAGGACATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 90 bp AGGAAGCTCAAGAGGTCCTGGGTGGAGGGGAGGTTAGCGGTGATGTaGATGATAGAACCAAGGTGGAACTTGGAATTATTCTGGGTAAGG +
Preference number: 6 (lower is better)
Translates to: RKLKRSWVEGRLAVM*MIEPRWNLELFWVR
Trigger: CCTTACCCAGAATAATTCCAAGTTCCACCTTGGTTCTATCATCAACATCACCGCTAACCTCCCCTCCACCCAGGACCTCTTGAGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 90 bp CATGGTGGCTGTGGCTACAGCTCTTGCGACCAGCTCCATAGCATCTaGTACGTAGTGCTCAAAGACAGACTGTGTTGTTTTTCCATGAGC +
Preference number: 6 (lower is better)
Translates to: HGGCGYSSCDQLHSI*YVVLKDRLCCFSMS
Trigger: GCTCATGGAAAAACAACACAGTCTGTCTTTGAGCACTACGTACAAGATGCTATGGAGCTGGTCGCAAGAGCTGTAGCCACAGCCACCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS TCA 72 bp GCTCAAAGACAGACTGTGTTGTTTTTCCATGAGCAATaGGCCCTAAGGGCAGACCCTCTGTCCTCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: AQRQTVLFFHEQ*ALRADPLSSVP
Trigger: AGGAACTGAGGACAGAGGGTCTGCCCTTAGGGCTCATTGCTCATGGAAAAACAACACAGTCTGTCTTTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp TTCCATTCATACAGAGTGAGGAAGACGGCAGTGATGTaGAGAGCCACAAAAATCCCCAGCCACATTGTCCAG +
Preference number: 6 (lower is better)
Translates to: FHSYRVRKTAVM*RATKIPSHIVQ
Trigger: CTGGACAATGTGGCTGGGGATTTTTGTGGCTCTGCACATCACTGCCGTCTTCCTCACTCTGTATGAATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 72 bp CCAATGCACAGCAGCACAAAGAGCCCAGAGAAGTGTTaGATGCCCATTTGCAAAGTCTCCGTGACAGCAAAA +
Preference number: 6 (lower is better)
Translates to: PMHSSTKSPEKC*MPICKVSVTAK
Trigger: TTTTGCTGTCACGGAGACTTTGCAAATGGGCATCAAACACTTCTCTGGGCTCTTTGTGCTGCTGTGCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp TCTCTGGGAAACTTTGTCTCACATAATCTTCAGCACTaGTTTCTCGGACAGTTCCAAAGCGGAATCCTTGGG +
Preference number: 6 (lower is better)
Translates to: SLGNFVSHNLQH*FLGQFQSGILG
Trigger: CCCAAGGATTCCGCTTTGGAACTGTCCGAGAAAGCAGTGCTGAAGATTATGTGAGACAAAGTTTCCCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp GTAAGGAGGAGGAAGTCGGTGATGTTCCAGTCTTCCTaGCACAGCAACAAGCTAAAATTGTACCAGTTGTTC +
Preference number: 6 (lower is better)
Translates to: VRRRKSVMFQSS*HSNKLKLYQLF
Trigger: GAACAACTGGTACAATTTTAGCTTGTTGCTGTGCCAGGAAGACTGGAACATCACCGACTTCCTCCTCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp GTAGCAGCAGCCTGTATACTATGTGCTCACCAATGGTaGTCAAAATGGACAGACCAAATCCAATGCACAGCA +
Preference number: 6 (lower is better)
Translates to: VAAACILCAHQW*SKWTDQIQCTA
Trigger: TGCTGTGCATTGGATTTGGTCTGTCCATTTTGACCACCATTGGTGAGCACATAGTATACAGGCTGCTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp GTGGTAGCAGCAGCCTGTATACTATGTGCTCACCAATaGTGGTCAAAATGGACAGACCAAATCCAATGCACA +
Preference number: 6 (lower is better)
Translates to: VVAAACILCAHQ*WSKWTDQIQCT
Trigger: TGTGCATTGGATTTGGTCTGTCCATTTTGACCACCATTGGTGAGCACATAGTATACAGGCTGCTGCTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 72 bp TGTGGCTACAGCTCTTGCGACCAGCTCCATAGCATCTaGTACGTAGTGCTCAAAGACAGACTGTGTTGTTTT +
Preference number: 6 (lower is better)
Translates to: CGYSSCDQLHSI*YVVLKDRLCCF
Trigger: AAAACAACACAGTCTGTCTTTGAGCACTACGTACAAGATGCTATGGAGCTGGTCGCAAGAGCTGTAGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 72 bp AAACTTCTCTTGCCACAGGGAACCACCCTGTACCACTaGTCATGGAGCATATCCATAAACCCATGTGACTTG +
Preference number: 6 (lower is better)
Translates to: KLLLPQGTTLYH*SWSISINPCDL
Trigger: CAAGTCACATGGGTTTATGGATATGCTCCATGACAAGTGGTACAGGGTGGTTCCCTGTGGCAAGAGAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361820.6
ENST00000479772.1
CDS CAA 72 bp CTGGTGTGGAGCCAGTATTGCAGCTTGGATTTGTTTTaGATTCGTGGTAGCAGCAGCCTGTATACTATGTGC +
Preference number: 6 (lower is better)
Translates to: LVWSQYCSLDLF*IRGSSSLYTMC
Trigger: GCACATAGTATACAGGCTGCTGCTACCACGAATCAAAAACAAATCCAAGCTGCAATACTGGCTCCACACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 90 bp AAGTCGGTGATGTTCCAGTCTTCCTGGCACAGCAACAAGCTAAAATaGTACCAGTTGTTCATGGTCAGGATTGAGACAGTGACATCAGCA +
Preference number: 6 (lower is better)
Translates to: KSVMFQSSWHSNKLK*YQLFMVRIETVTSA
Trigger: TGCTGATGTCACTGTCTCAATCCTGACCATGAACAACTGGTACAATTTTAGCTTGTTGCTGTGCCAGGAAGACTGGAACATCACCGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp TTTACTTCTATTTCGCCCCTTGGGAGTCAAACCAAATaGACTCTTCCATTCATACAGAGTGAGGAAGACGGC +
Preference number: 6 (lower is better)
Translates to: FTSISPLGSQTK*TLPFIQSEEDG
Trigger: GCCGTCTTCCTCACTCTGTATGAATGGAAGAGTCCATTTGGTTTGACTCCCAAGGGGCGAAATAGAAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp GCCTGTATACTATGTGCTCACCAATGGTGGTCAAAATaGACAGACCAAATCCAATGCACAGCAGCACAAAGA +
Preference number: 6 (lower is better)
Translates to: ACILCAHQWWSK*TDQIQCTAAQR
Trigger: TCTTTGTGCTGCTGTGCATTGGATTTGGTCTGTCCATTTTGACCACCATTGGTGAGCACATAGTATACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 72 bp TTAGCGGTGATGTTGATGATAGAACCAAGGTGGAACTaGGAATTATTCTGGGTAAGGAGGAGGAAGTCGGTG +
Preference number: 6 (lower is better)
Translates to: LAVMLMIEPRWN*ELFWVRRRKSV
Trigger: CACCGACTTCCTCCTCCTTACCCAGAATAATTCCAAGTTCCACCTTGGTTCTATCATCAACATCACCGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp CCTTCATCATCTACCTCCCTTGTGAAGACAAAAGGATaGTCAATCAGGGTAACCACTCTCAAGTGTAGCTTA +
Preference number: 6 (lower is better)
Translates to: PSSSTSLVKTKG*SIRVTTLKCSL
Trigger: TAAGCTACACTTGAGAGTGGTTACCCTGATTGAGCATCCTTTTGTCTTCACAAGGGAGGTAGATGATGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp TTGATGATAGAACCAAGGTGGAACTTGGAATTATTCTaGGTAAGGAGGAGGAAGTCGGTGATGTTCCAGTCT +
Preference number: 6 (lower is better)
Translates to: LMIEPRWNLELF*VRRRKSVMFQS
Trigger: AGACTGGAACATCACCGACTTCCTCCTCCTTACCCAGAATAATTCCAAGTTCCACCTTGGTTCTATCATCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp CTGGATCATTCTTCAGATACTCCACTCCATCAGGGGTaGCTGGAACATTGTACCTTCTCATATATTCATGCA +
Preference number: 6 (lower is better)
Translates to: LDHSSDTPLHQG*LEHCTFSYIHA
Trigger: TGCATGAATATATGAGAAGGTACAATGTTCCAGCCACCCCTGATGGAGTGGAGTATCTGAAGAATGATCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 72 bp TCTTCCTGGCACAGCAACAAGCTAAAATTGTACCAGTaGTTCATGGTCAGGATTGAGACAGTGACATCAGCA +
Preference number: 6 (lower is better)
Translates to: SSWHSNKLKLYQ*FMVRIETVTSA
Trigger: TGCTGATGTCACTGTCTCAATCCTGACCATGAACAACTGGTACAATTTTAGCTTGTTGCTGTGCCAGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 72 bp ATGTTCCAGTCTTCCTGGCACAGCAACAAGCTAAAATaGTACCAGTTGTTCATGGTCAGGATTGAGACAGTG +
Preference number: 6 (lower is better)
Translates to: MFQSSWHSNKLK*YQLFMVRIETV
Trigger: CACTGTCTCAATCCTGACCATGAACAACTGGTACAATTTTAGCTTGTTGCTGTGCCAGGAAGACTGGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 90 bp ATGTTCCAGTCTTCCTGGCACAGCAACAAGCTAAAATTGTACCAGTaGTTCATGGTCAGGATTGAGACAGTGACATCAGCATCAGAACTT +
Preference number: 6 (lower is better)
Translates to: MFQSSWHSNKLKLYQ*FMVRIETVTSASEL
Trigger: AAGTTCTGATGCTGATGTCACTGTCTCAATCCTGACCATGAACAACTGGTACAATTTTAGCTTGTTGCTGTGCCAGGAAGACTGGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 90 bp TTCAAGGCTGAAGAAAAGGAGAAGACTTTACTTCTATTTCGCCCCTaGGGAGTCAAACCAAATGGACTCTTCCATTCATACAGAGTGAGG +
Preference number: 6 (lower is better)
Translates to: FKAEEKEKTLLLFRP*GVKPNGLFHSYRVR
Trigger: CCTCACTCTGTATGAATGGAAGAGTCCATTTGGTTTGACTCCCAAGGGGCGAAATAGAAGTAAAGTCTTCTCCTTTTCTTCAGCCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS TCA 72 bp TCATGGAGCATATCCATAAACCCATGTGACTTGTATTaGCTGATTAGCTCGGATATGTTGGCGGTCAATGGA +
Preference number: 6 (lower is better)
Translates to: SWSISINPCDLY*LISSDMLAVNG
Trigger: TCCATTGACCGCCAACATATCCGAGCTAATCAGTCAATACAAGTCACATGGGTTTATGGATATGCTCCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361820.6
ENST00000479772.1
CDS GCA 72 bp TTTTTGATTCGTGGTAGCAGCAGCCTGTATACTATGTaGTCACCAATGGTGGTCAAAATGGACAGACCAAAT +
Preference number: 6 (lower is better)
Translates to: FLIRGSSSLYTM*SPMVVKMDRPN
Trigger: ATTTGGTCTGTCCATTTTGACCACCATTGGTGAGCACATAGTATACAGGCTGCTGCTACCACGAATCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp TTCTTGAATTTAATGGGCACTGTATCATTACTGCTATaGAGGCTGCTAAAAAGGCTGTCCAATGTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: FLNLMGTVSLLL*RLLKRLSNVEE
Trigger: CTCTTCCACATTGGACAGCCTTTTTAGCAGCCTCCATAGCAGTAATGATACAGTGCCCATTAAATTCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CAA 72 bp GAAGAAAAGGAGAAGACTTTACTTCTATTTCGCCCCTaGGGAGTCAAACCAAATGGACTCTTCCATTCATAC +
Preference number: 6 (lower is better)
Translates to: EEKEKTLLLFRP*GVKPNGLFHSY
Trigger: GTATGAATGGAAGAGTCCATTTGGTTTGACTCCCAAGGGGCGAAATAGAAGTAAAGTCTTCTCCTTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS CCA 72 bp AAGAAAAGGAGAAGACTTTACTTCTATTTCGCCCCTTaGGAGTCAAACCAAATGGACTCTTCCATTCATACA +
Preference number: 6 (lower is better)
Translates to: KKRRRLYFYFAP*ESNQMDSSIHT
Trigger: TGTATGAATGGAAGAGTCCATTTGGTTTGACTCCCAAGGGGCGAAATAGAAGTAAAGTCTTCTCCTTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361820.6
CDS GCA 72 bp TACAATATAGAGGTCGAAGTCAAAGTTCATGTCTTCTaGTATCTTTTCCAGCAGATCAATGCAATATCCATA +
Preference number: 6 (lower is better)
Translates to: YNIEVEVKVHVF*YLFQQINAISI
Trigger: TATGGATATTGCATTGATCTGCTGGAAAAGATAGCAGAAGACATGAACTTTGACTTCGACCTCTATATTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361820.6