RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRHL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000158055

Ensembl transcript IDs: ENST00000236255.4, ENST00000350501.9, ENST00000356046.6, ENST00000361548.9, ENST00000461318.1, ENST00000524724.5, ENST00000528064.5, ENST00000528181.1, ENST00000530984.1

Found 554 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTaGCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAG +
Preference number: 1 (lower is better)
Translates to: SGGRTSWRGAAGGSV*RHHLNGQPAGAPLQ
Trigger: CTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR CCA 90 bp GGGAGGCACTGGCAGGAAGTTCAGGGAGCAGATTCAAGCATACCATaGGGATCCAGGCCAGGGGACCCCCTAGGTCTCTCCCTGGCCCTG +
Preference number: 1 (lower is better)
Translates to: GRHWQEVQGADSSIP*GSRPGDPLGLSLAL
Trigger: CAGGGCCAGGGAGAGACCTAGGGGGTCCCCTGGCCTGGATCCCCATGGTATGCTTGAATCTGCTCCCTGAACTTCCTGCCAGTGCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR TCA 90 bp CGCCTTCCTTGGCCTGCTTGGAGGGCAGAGGCTCAAACTCCTCAGTaGAGGGCGAGCAGGTACGCTTCAGAGGCAGCCTGTTGGAGCTGC +
Preference number: 1 (lower is better)
Translates to: RLPWPAWRAEAQTPQ*RASRYASEAACWSC
Trigger: GCAGCTCCAACAGGCTGCCTCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAAGCAGGCCAAGGAAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CCA 90 bp ATTCAAGTAACAGCGCTGAGGCATGTGGAGAGGTTGTGTGTGGCGTaGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGGTTTGG +
Preference number: 1 (lower is better)
Translates to: IQVTALRHVERLCVA*GHVPAGPLQVVRVW
Trigger: CCAAACCCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTCTCCACATGCCTCAGCGCTGTTACTTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR CCA 90 bp CACATTGGGGATGAACAGCACGGGTGGCGTCTCCAGGTCAGTCTCTaGCCGAAGGTAGGTCGTCTCATTGCCCCTGAAGCCCGACAGCAG +
Preference number: 1 (lower is better)
Translates to: HIGDEQHGWRLQVSL*PKVGRLIAPEARQQ
Trigger: CTGCTGTCGGGCTTCAGGGGCAATGAGACGACCTACCTTCGGCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR GCA 90 bp TCAGCCACGTCAATGACCCGCTGCTTGGCAGTGGGTTGCCGGGAATaGCAGTGCTTCCAGAAGCGCAGCTGCTCTACTGGGACCTTCTCA +
Preference number: 1 (lower is better)
Translates to: SATSMTRCLAVGCRE*QCFQKRSCSTGTFS
Trigger: TGAGAAGGTCCCAGTAGAGCAGCTGCGCTTCTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGTGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CCA 90 bp GCGCTGCAGGCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTaGCGTCTCCAGGTCAGTCTCTGGCCGAAGGTAGGTCGTCTCATT +
Preference number: 1 (lower is better)
Translates to: ALQAGEVHIGDEQHG*RLQVSLWPKVGRLI
Trigger: AATGAGACGACCTACCTTCGGCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR GCA 90 bp ACGTCAATGACCCGCTGCTTGGCAGTGGGTTGCCGGGAATGCCAGTaGTTCCAGAAGCGCAGCTGCTCTACTGGGACCTTCTCATTGTCG +
Preference number: 1 (lower is better)
Translates to: TSMTRCLAVGCRECQ*FQKRSCSTGTFSLS
Trigger: CGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGCTTCTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CCA 90 bp TGGGAAGAGCATCGACTCCTGTGGGTCATCTTTGAAGGTGCTGTCTaGCTGCCAGCGCTGTGTGGGCGGCACCCCATGAATGCTCTCAAA +
Preference number: 1 (lower is better)
Translates to: WEEHRLLWVIFEGAV*LPALCGRHPMNALK
Trigger: TTTGAGAGCATTCATGGGGTGCCGCCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAAGATGACCCACAGGAGTCGATGCTCTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CCA 90 bp ATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACAAGGGTCTTaGGAGGAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGAC +
Preference number: 1 (lower is better)
Translates to: ILTGSLQEHHCRQGS*EEGTVFWVGGNHGD
Trigger: GTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR GCA 90 bp TTGGCAGTGGGTTGCCGGGAATGCCAGTGCTTCCAGAAGCGCAGCTaGTCTACTGGGACCTTCTCATTGTCGAAGACAACCATCACCACA +
Preference number: 1 (lower is better)
Translates to: LAVGCRECQCFQKRS*STGTFSLSKTTITT
Trigger: TGTGGTGATGGTTGTCTTCGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGCTTCTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CCA 90 bp GAACCCATACTTCTCAGAGATCGCATTCCTCAGCCCCTTCAGGTCTaGGGTCTTCAACATGAGCGCGTCAAACACCTCCTCAGTCTCCCT +
Preference number: 1 (lower is better)
Translates to: EPILLRDRIPQPLQV*GLQHERVKHLLSLP
Trigger: AGGGAGACTGAGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTGAGGAATGCGATCTCTGAGAAGTATGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR TCA 90 bp TTGAAGGTGCTGTCTGGCTGCCAGCGCTGTGTGGGCGGCACCCCATaGATGCTCTCAAACAAGGAGTTGAGGGAGCCATTATCATACATA +
Preference number: 1 (lower is better)
Translates to: LKVLSGCQRCVGGTP*MLSNKELREPLSYI
Trigger: TATGTATGATAATGGCTCCCTCAACTCCTTGTTTGAGAGCATTCATGGGGTGCCGCCCACACAGCGCTGGCAGCCAGACAGCACCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR TCA 90 bp AGCGCTGTGTGGGCGGCACCCCATGAATGCTCTCAAACAAGGAGTTaGGGGAGCCATTATCATACATATCAGTGGTGGGTAACAGGTAGC +
Preference number: 1 (lower is better)
Translates to: SAVWAAPHECSQTRS*GSHYHTYQWWVTGS
Trigger: GCTACCTGTTACCCACCACTGATATGTATGATAATGGCTCCCTCAACTCCTTGTTTGAGAGCATTCATGGGGTGCCGCCCACACAGCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR TCA 90 bp TCCAGTCGATCGTTAGTGCTATTTACATCCTGCGCTGAGGAAGTCTaGGAAAGAGACTCCAATATAGTGTCTTTTAAAAGTCATTTGCAC +
Preference number: 1 (lower is better)
Translates to: SSRSLVLFTSCAEEV*ERDSNIVSFKSHLH
Trigger: GTGCAAATGACTTTTAAAAGACACTATATTGGAGTCTCTTTCTCAGACTTCCTCAGCGCAGGATGTAAATAGCACTAACGATCGACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR GCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCGTGGGGCCACGTCCCTaGTGGCCCCTTGCAGGTCGT +
Preference number: 2 (lower is better)
Translates to: GAAPAGVVLREGACAATIVGPRP*WPLAGR
Trigger: ACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCAC...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATGGAGAGGTTGTGTGTaGCGTGGGGCCACGTCCCTG +
Preference number: 2 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPWRGCV*RGATSL
Trigger: CAGGGACGTGGCCCCACGCCACACACAACCTCTCCA...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCATGGTGACATTGTTTTaGGGTACGGGGAGGCACTGG +
Preference number: 2 (lower is better)
Translates to: GAAPAGVVLREGACAATIMVTLF*GTGRHW
Trigger: CCAGTGCCTCCCCGTACCCCAAAACAATGTCACCAT...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCTGCAGACAAGGGTCTTaGGAGGAGGGAACAGTCTTC +
Preference number: 2 (lower is better)
Translates to: GAAPAGVVLREGACAATICRQGS*EEGTVF
Trigger: GAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCA...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCAGAGGGAACAGTCTTCTaGGTAGGTGGTAACCATGGT +
Preference number: 2 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPEGTVF*VGGNHG
Trigger: ACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR TCA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCACGTCTGTGGGTCTGTaGCTCAAGGGCCTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: EGACAATILTGSLQEHHCTSVGL*LKGLFP
Trigger: AGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGT...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR GCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGGTGGGGCCACGTCCCTaGTGGCCCCTTGCAGGTCGT +
Preference number: 2 (lower is better)
Translates to: CRSTTADKGLGRREQSSGVGPRP*WPLAGR
Trigger: ACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCAC...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp GATGAACAGCACGGGTGGCGTCTCCAGGTCAGTCTCTGGCCGAAGGTAGGTCGTGCTGCCAGCGCTGTGTaGGCGGCACCCCATGAATGC +
Preference number: 2 (lower is better)
Translates to: DEQHGWRLQVSLWPKVGRAASAV*AAPHEC
Trigger: GCATTCATGGGGTGCCGCCCACACAGCGCTGGCAGC...ACGACCTACCTTCGGCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR TCA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGGCCCCTTGCAGGTCGTaGGGGTTTGGATGCTCGAGA +
Preference number: 2 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKAPCRS*GFGCSR
Trigger: TCTCGAGCATCCAAACCCTCACGACCTGCAAGGGGC...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR TCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACAGCCCCTTGCAGGTCGTaGGGGTTTGGATGCTCGAGA +
Preference number: 2 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTAPCRS*GFGCSR
Trigger: TCTCGAGCATCCAAACCCTCACGACCTGCAAGGGGC...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACAGGTACGGGGAGGCACTaGCAGGAAGTTCAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTGTGRH*QEVQGA
Trigger: TGCTCCCTGAACTTCCTGCCAGTGCCTCCCCGTACC...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp GGGTTCCGGGGAGGTTTTCAGGATATCTGGGAAGAGCATCGACTCCTGTGGGTCCTGCCTTGCCAGGGGTaGGCAAGGCCCCCTCCAAGC +
Preference number: 2 (lower is better)
Translates to: GFRGGFQDIWEEHRLLWVLPCQG*ARPPPS
Trigger: GCTTGGAGGGGGCCTTGCCCACCCCTGGCAAGGCAG...GACCCACAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACCTCCCCGGAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CCA 90 bp TTGGAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAGCCTGTTGGAGCTGCTaGGTCCTGCCGAGGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LEGRGSNSSVKGEQVRFRACWSC*VLPRGL
Trigger: CAGCCCCCTCGGCAGGACCCAGCAGCTCCAACAGGC...TCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CAA 90 bp GACAGCAGGCAGCCCTTGACGCCACTGTTGCTGGAGTCAGGGCACTaGACCTTCCTCCGGAACTGCTTCCGCTCGTCATCGCGCATCTTC +
Preference number: 2 (lower is better)
Translates to: DSRQPLTPLLLESGH*TFLRNCFRSSSRIF
Trigger: GAAGATGCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGTCAAGTGCCCTGACTCCAGCAACAGTGGCGTCAAGGGCTGCCTGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR GCA 90 bp TCAATGACCCGCTGCTTGGCAGTGGGTTGCCGGGAATGCCAGTGCTTCCAGAAGAAGGCCTTTGCCACCTaGTGGGGTCCGCAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: SMTRCLAVGCRECQCFQKKAFAT*WGPQGD
Trigger: GTCACCCTGCGGACCCCAGCAGGTGGCAAAGGCCTT...CTTCTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CCA 90 bp GCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTGGCGTCTCCAGGTCAGTCCCGCTGCTTGGCAGTaGGTTGCCGGGAATGCCAGT +
Preference number: 2 (lower is better)
Translates to: AGEVHIGDEQHGWRLQVSPAAWQ*VAGNAS
Trigger: ACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGG...ACTGACCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR TCA 90 bp CTGAAGGTCGCCTTCCTTGGCCTGCTTGGAGGGCAGAGGCTCAAACTCCTCAGTACAGCAGGCAGCCCTTaGCGCCACTGTTGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: LKVAFLGLLGGQRLKLLSTAGSP*RHCCWS
Trigger: ACTCCAGCAACAGTGGCGTCAAGGGCTGCCTGCTGT...ACTGAGGAGTTTGAGCCTCTGCCCTCCAAGCAGGCCAAGGAAGGCGACCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR TCA 90 bp GAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAGGCAGTGCACATTGGGGATaGACAGCACGGGTGGCGTCT +
Preference number: 2 (lower is better)
Translates to: EGRGSNSSVKGEQVRFRGSAHWG*TARVAS
Trigger: AGACGCCACCCGTGCTGTTCATCCCCAATGTGCACT...GCCTCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR GCA 90 bp CTTGGAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGACAAGGCAAGGCCTTTaGCACCTGCTGGGGTCCGCA +
Preference number: 2 (lower is better)
Translates to: LGGQRLKLLSEGRAGTLQTRQGL*HLLGSA
Trigger: TGCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGT...CTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR GCA 90 bp CTGAAGGTCGCCTTCCTTGGCCTGCTTGGAGGGCAGAGGCTCAAACTCCTCAGTACGTCAATGACCCGCTaGTTGGCAGTGGGTTGCCGG +
Preference number: 2 (lower is better)
Translates to: LKVAFLGLLGGQRLKLLSTSMTR*LAVGCR
Trigger: CCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGT...ACTGAGGAGTTTGAGCCTCTGCCCTCCAAGCAGGCCAAGGAAGGCGACCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACAGATTCAAGCATACCATaGGGATCCAGGCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTDSSIP*GSRPGD
Trigger: GTCCCCTGGCCTGGATCCCCATGGTATGCTTGAATC...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGGGTACGGGGAGGCACTaGCAGGAAGTTCAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: CRSTTADKGLGRREQSSGGTGRH*QEVQGA
Trigger: TGCTCCCTGAACTTCCTGCCAGTGCCTCCCCGTACC...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp ACGTCAATGACCCGCTGCTTGGCAGTGGGTTGCCGGGAATGCCAGTGCTTCCAGTTTGAAGGTGCTGTCTaGCTGCCAGCGCTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: TSMTRCLAVGCRECQCFQFEGAV*LPALCG
Trigger: CCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAA...CTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CAA 90 bp TTCTTTGCAGTCAGCCACGTCAATGACCCGCTGCTTGGCAGTGGGTaGCCGGGAATGCCAGTGCTTCCAGAAGCGCAGCTGCTCTACTGG +
Preference number: 2 (lower is better)
Translates to: FFAVSHVNDPLLGSG*PGMPVLPEAQLLYW
Trigger: CCAGTAGAGCAGCTGCGCTTCTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGTGGCTGACTGCAAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR TCA 90 bp TTGATCTGGCAGACAGCACGGTGTACCAGGCGCTCAGTGCCCAAGCCACAGTCAGTGGGCGGCACCCCATaGATGCTCTCAAACAAGGAG +
Preference number: 2 (lower is better)
Translates to: LIWQTARCTRRSVPKPQSVGGTP*MLSNKE
Trigger: CTCCTTGTTTGAGAGCATTCATGGGGTGCCGCCCAC...TGACTGTGGCTTGGGCACTGAGCGCCTGGTACACCGTGCTGTCTGCCAGATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR TCA 90 bp TTGATCTGGCAGACAGCACGGTGTACCAGGCGCTCAGTGCCCAAGCCACAGTCAGTGACTCGCCTGACTTaGTGTGGATGGCTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: LIWQTARCTRRSVPKPQSVTRLT*CGWLWG
Trigger: CCCCCAAAGCCATCCACATCAAGTCAGGCGAGTCAC...TGACTGTGGCTTGGGCACTGAGCGCCTGGTACACCGTGCTGTCTGCCAGATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR TCA 90 bp TTCCGCTCGTCATCGCGCATCTTCCTCTCAGCTCCCTTGTCACAGAAGATCTTGCTGGGGTCCGCAGGGTaGCGGGGTAGAACTGGCCTT +
Preference number: 2 (lower is better)
Translates to: FRSSSRIFLSAPLSQKILLGSAG*RGRTGL
Trigger: AAGGCCAGTTCTACCCCGTCACCCTGCGGACCCCAG...CAAGATCTTCTGTGACAAGGGAGCTGAGAGGAAGATGCGCGATGACGAGCGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR TCA 90 bp GCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTGGCGTCTCCAGGTCAGTTGGAGTCAGGGCACTTaGCCTTCCTCCGGAACTGCT +
Preference number: 2 (lower is better)
Translates to: AGEVHIGDEQHGWRLQVSWSQGT*PSSGTA
Trigger: AGCAGTTCCGGAGGAAGGTCAAGTGCCCTGACTCCA...ACTGACCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR GCA 90 bp CTGAAGGTCGCCTTCCTTGGCCTGCTTGGAGGGCAGAGGCTCAAACTCCTCAGTTGCTTGGCAGTGGGTTaGCGGGAATGCCAGTGCTTC +
Preference number: 2 (lower is better)
Translates to: LKVAFLGLLGGQRLKLLSCLAVG*RECQCF
Trigger: GAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCA...ACTGAGGAGTTTGAGCCTCTGCCCTCCAAGCAGGCCAAGGAAGGCGACCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR GCA 90 bp TCTCTTCAGGGAACCCATACTTCTCAGAGATCGCATTCCTCAGCCCCTTCAGGTAAGGTGCTGTCTGGCTaGCAGCGCTGTGTGGGCGGC +
Preference number: 2 (lower is better)
Translates to: SLQGTHTSQRSHSSAPSGKVLSG*QRCVGG
Trigger: GCCGCCCACACAGCGCTGGCAGCCAGACAGCACCTT...ACCTGAAGGGGCTGAGGAATGCGATCTCTGAGAAGTATGGGTTCCCTGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CCA 90 bp CTTGGAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGGTAGTCCTCTGGACATaGGGGTTCCGGGGAGGTTTT +
Preference number: 2 (lower is better)
Translates to: LGGQRLKLLSEGRAGTLQVVLWT*GFRGGF
Trigger: AAAACCTCCCCGGAACCCCCATGTCCAGAGGACTAC...CTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CCA 90 bp AGCACGGTGTACCAGGCGCTCAGTGCCCAAGCCACAGTCATAGGTGTCAATCTGTCGCCTGACTTGATGTaGATGGCTTTGGGGGAGCCC +
Preference number: 2 (lower is better)
Translates to: STVYQALSAQATVIGVNLSPDLM*MALGEP
Trigger: GGGCTCCCCCAAAGCCATCCACATCAAGTCAGGCGA...CAGATTGACACCTATGACTGTGGCTTGGGCACTGAGCGCCTGGTACACCGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR GCA 90 bp TCTCTTCAGGGAACCCATACTTCTCAGAGATCGCATTCCTCAGCCCCTTCAGGTGCCCCTCCAGAGCGCTaGAGGCTGGAGAAGTGCACA +
Preference number: 2 (lower is better)
Translates to: SLQGTHTSQRSHSSAPSGAPPER*RLEKCT
Trigger: TGTGCACTTCTCCAGCCTGCAGCGCTCTGGAGGGGC...ACCTGAAGGGGCTGAGGAATGCGATCTCTGAGAAGTATGGGTTCCCTGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATGGGCCACGTCCCTGCTaGCCCCTTGCAGGTCGTGAG +
Preference number: 2 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDGPRPC*PLAGRE
Trigger: CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCC...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp GGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAGGCAGCCAAATCTGGGTACTCTaGGGTTCCAGACACGTTCTC +
Preference number: 2 (lower is better)
Translates to: GRGSNSSVKGEQVRFRGSQIWVL*GSRHVL
Trigger: GAGAACGTGTCTGGAACCCCAGAGTACCCAGATTTG...GCTGCCTCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR TCA 90 bp TCTCTTCAGGGAACCCATACTTCTCAGAGATCGCATTCCTCAGCCCCTTCAGGTAGTCAGCCACGTCAATaGCCCGCTGCTTGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: SLQGTHTSQRSHSSAPSGSQPRQ*PAAWQW
Trigger: CCACTGCCAAGCAGCGGGTCATTGACGTGGCTGACT...ACCTGAAGGGGCTGAGGAATGCGATCTCTGAGAAGTATGGGTTCCCTGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR GCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATGCGGGAGGGAGCGTGTaGCGCCACCATCTTAACGGG +
Preference number: 2 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDAGGSV*RHHLNG
Trigger: CCCGTTAAGATGGTGGCGGCACACGCTCCCTCCCGC...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACTGGAGAGGTTGTGTGTaGCGTGGGGCCACGTCCCTG +
Preference number: 2 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYWRGCV*RGATSL
Trigger: CAGGGACGTGGCCCCACGCCACACACAACCTCTCCA...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp GATGAACAGCACGGGTGGCGTCTCCAGGTCAGTCTCTGGCCGAAGGTAGGTCGTCTTCTTGAGCAAATCTaGGTACTCTGGGGTTCCAGA +
Preference number: 2 (lower is better)
Translates to: DEQHGWRLQVSLWPKVGRLLEQI*VLWGSR
Trigger: TCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAG...ACGACCTACCTTCGGCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CCA 90 bp CCTCAGCCCCTTCAGGTCTGGGGTCTTCAACATGAGCGCGTCAAACACCTCCTCGAGCATCGACTCCTGTaGGTCATCTTTGAAGGTGCT +
Preference number: 2 (lower is better)
Translates to: PQPLQVWGLQHERVKHLLEHRLL*VIFEGA
Trigger: AGCACCTTCAAAGATGACCCACAGGAGTCGATGCTC...GAGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CCA 90 bp GAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAGGCGGTTTTCAGGATATCTaGGAAGAGCATCGACTCCTG +
Preference number: 2 (lower is better)
Translates to: EGRGSNSSVKGEQVRFRGGFQDI*EEHRLL
Trigger: CAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACC...GCCTCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CCA 90 bp AGCACGGTGTACCAGGCGCTCAGTGCCCAAGCCACAGTCATAGGTGTCAATCTGGCGCAGCTGCTCTACTaGGACCTTCTCATTGTCGAA +
Preference number: 2 (lower is better)
Translates to: STVYQALSAQATVIGVNLAQLLY*DLLIVE
Trigger: TTCGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGC...CAGATTGACACCTATGACTGTGGCTTGGGCACTGAGCGCCTGGTACACCGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CCA 90 bp CTTGACCTTCCTCCGGAACTGCTTCCGCTCGTCATCGCGCATCTTCCTCTCAGCCAGAAGATCTTGATCTaGCAGACAGCACGGTGTACC +
Preference number: 2 (lower is better)
Translates to: LDLPPELLPLVIAHLPLSQKILI*QTARCT
Trigger: GGTACACCGTGCTGTCTGCCAGATCAAGATCTTCTG...GCTGAGAGGAAGATGCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGTCAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR GCA 90 bp CTGAAGGTCGCCTTCCTTGGCCTGCTTGGAGGGCAGAGGCTCAAACTCCTCAGTGCCACCTCCTCAATGTaGTCCACAGTGTTGAAGTTT +
Preference number: 2 (lower is better)
Translates to: LKVAFLGLLGGQRLKLLSATSSM*STVLKF
Trigger: AAACTTCAACACTGTGGAGCACATTGAGGAGGTGGC...ACTGAGGAGTTTGAGCCTCTGCCCTCCAAGCAGGCCAAGGAAGGCGACCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR GCA 90 bp GGGAACCCATACTTCTCAGAGATCGCATTCCTCAGCCCCTTCAGGTCTGGGGTCCCACACAAAGGACAGTaGATTATAGGCCACCTCCTC +
Preference number: 2 (lower is better)
Translates to: GNPYFSEIAFLSPFRSGVPHKGQ*IIGHLL
Trigger: GAGGAGGTGGCCTATAATGCACTGTCCTTTGTGTGG...GACCCCAGACCTGAAGGGGCTGAGGAATGCGATCTCTGAGAAGTATGGGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTCCGCACCAGCTGGCGTaGTGCTGCGGGAGGGAGCGT +
Preference number: 2 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCPHQLA*CCGRER
Trigger: ACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGG...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTGGGCCACGTCCCTGCTaGCCCCTTGCAGGTCGTGAG +
Preference number: 2 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCGPRPC*PLAGRE
Trigger: CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCC...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR CAA 90 bp TGCCAGTGCTTCCAGAAGCGCAGCTGCTCTACTGGGACCTTCTCATaGTCGAAGACAACCATCACCACACTCTTGACTTTGTTGGAGGAC +
Preference number: 2 (lower is better)
Translates to: CQCFQKRSCSTGTFS*SKTTITTLLTLLED
Trigger: GTCCTCCAACAAAGTCAAGAGTGTGGTGATGGTTGTCTTCGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGCTTCTGGAAGCACTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR TCA 90 bp CTTGGAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGTCAGGTTATTCTTCTTaGGCAAATCTGGGTACTCTG +
Preference number: 2 (lower is better)
Translates to: LGGQRLKLLSEGRAGTLQSGYSS*ANLGTL
Trigger: CAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGA...CTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR TCA 90 bp TTGGAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGATGTGCTCCACAGTGTTaGAGTTTTCTTTGCAGTCAG +
Preference number: 2 (lower is better)
Translates to: LEGRGSNSSVKGEQVRFRCAPQC*SFLCSQ
Trigger: CTGACTGCAAAGAAAACTTCAACACTGTGGAGCACA...TCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR GCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTGCGGGAGGGAGCGTGTaGCGCCACCATCTTAACGGG +
Preference number: 2 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVAGGSV*RHHLNG
Trigger: CCCGTTAAGATGGTGGCGGCACACGCTCCCTCCCGC...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTAGGTTGTGTGTGGCGTaGGGCCACGTCCCTGCTGGC +
Preference number: 2 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCRLCVA*GHVPAG
Trigger: GCCAGCAGGGACGTGGCCCCACGCCACACACAACCT...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACGATTCAAGCATACCATaGGGATCCAGGCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYDSSIP*GSRPGD
Trigger: GTCCCCTGGCCTGGATCCCCATGGTATGCTTGAATC...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp TTGGAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGACATACATATCAGTGGTaGGTAACAGGTAGCTGTCCA +
Preference number: 2 (lower is better)
Translates to: LEGRGSNSSVKGEQVRFRHTYQW*VTGSCP
Trigger: TGGACAGCTACCTGTTACCCACCACTGATATGTATG...TCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR TCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTACGTCTGTGGGTCTGTaGCTCAAGGGCCTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVTSVGL*LKGLFP
Trigger: AGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGT...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp GTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCGAGGGAACAGTCTTCTaGGTAGGTGGTAACCATGGT +
Preference number: 2 (lower is better)
Translates to: VYNSEWQGSSFTQRSLCSEGTVF*VGGNHG
Trigger: ACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC...GGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTATGGTGACATTGTTTTaGGGTACGGGGAGGCACTGG +
Preference number: 2 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCMVTLF*GTGRHW
Trigger: CCAGTGCCTCCCCGTACCCCAAAACAATGTCACCAT...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR CAA 90 bp AAATCAAGAGTTTTCAAGTTAACTGACCAAAGGTTGAGAAATCCTTaGTCTGAAGTTGAAGGAAGACAGAGAGTGGGGGCCGCACCAGCT +
Preference number: 2 (lower is better)
Translates to: KSRVFKLTDQRLRNP*SEVEGRQRVGAAPA
Trigger: AGCTGGTGCGGCCCCCACTCTCTGTCTTCCTTCAACTTCAGACAAAGGATTTCTCAACCTTTGGTCAGTTAACTTGAAAACTCTTGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR TCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTTGCGCTGAGGAAGTCTaGGAAAGAGACTCCAATATA +
Preference number: 2 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVCAEEV*ERDSNI
Trigger: TATATTGGAGTCTCTTTCTCAGACTTCCTCAGCGCA...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR GCA 72 bp CGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTaGCGCCACCATCTTAACGGGCAGCCTGCAGGAGCA +
Preference number: 3 (lower is better)
Translates to: RTSWRGAAGGSV*RHHLNGQPAGA
Trigger: TGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR CCA 72 bp ACAGCGCTGAGGCATGTGGAGAGGTTGTGTGTGGCGTaGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTG +
Preference number: 3 (lower is better)
Translates to: TALRHVERLCVA*GHVPAGPLQVV
Trigger: CACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTCTCCACATGCCTCAGCGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR CCA 72 bp GGAGAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTaGCCCCTTGCAGGTCGTGAGGGTTTGGATGCTCGA +
Preference number: 3 (lower is better)
Translates to: GEVVCGVGPRPC*PLAGREGLDAR
Trigger: TCGAGCATCCAAACCCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CAA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACAGTCCCTGCTGGCCCCTaGCAGGTCGTGAGGGTTTGG +
Preference number: 3 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTVPAGP*QVVRVW
Trigger: CCAAACCCTCACGACCTGCAAGGGGCCAGCAGGGAC...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CAA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCCATGGTGACATTGTTTaGGGGTACGGGGAGGCACTG +
Preference number: 3 (lower is better)
Translates to: EGACAATILTGSLQEHHCHGDIV*GYGEAL
Trigger: CAGTGCCTCCCCGTACCCCAAAACAATGTCACCATG...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR GCA 72 bp GACTTTGTTGGAGGACAAGGCAAGGCCTTTGCCACCTaGTGGGGTCCGCAGGGTGACGGGGTAGAACTGGCC +
Preference number: 3 (lower is better)
Translates to: DFVGGQGKAFAT*WGPQGDGVELA
Trigger: GGCCAGTTCTACCCCGTCACCCTGCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGTCCTCCAACAAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR TCA 72 bp CAGAGCGCTGCAGGCTGGAGAAGTGCACATTGGGGATaGACAGCACGGGTGGCGTCTCCAGGTCAGTCTCTG +
Preference number: 3 (lower is better)
Translates to: QSAAGWRSAHWG*TARVASPGQSL
Trigger: CAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCAGCGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CCA 72 bp GATGAACAGCACGGGTGGCGTCTCCAGGTCAGTCTCTaGCCGAAGGTAGGTCGTCTCATTGCCCCTGAAGCC +
Preference number: 3 (lower is better)
Translates to: DEQHGWRLQVSL*PKVGRLIAPEA
Trigger: GGCTTCAGGGGCAATGAGACGACCTACCTTCGGCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CCA 72 bp TGGCAGGAAGTTCAGGGAGCAGATTCAAGCATACCATaGGGATCCAGGCCAGGGGACCCCCTAGGTCTCTCC +
Preference number: 3 (lower is better)
Translates to: WQEVQGADSSIP*GSRPGDPLGLS
Trigger: GGAGAGACCTAGGGGGTCCCCTGGCCTGGATCCCCATGGTATGCTTGAATCTGCTCCCTGAACTTCCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR CCA 72 bp GCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTaGCGTCTCCAGGTCAGTCTCTGGCCGAAGGTAGGT +
Preference number: 3 (lower is better)
Translates to: AGEVHIGDEQHG*RLQVSLWPKVG
Trigger: ACCTACCTTCGGCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CAA 90 bp CTTGACTTTGTTGGAGGACAAGGCAAGGCCTTTGCCACCTGCTGGGGTCCGCAGGGTGACTCGCCTGACTaGATGTGGATGGCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: LDFVGGQGKAFATCWGPQGDSPD*MWMALG
Trigger: CCCCAAAGCCATCCACATCAAGTCAGGCGAGTCACC...CTGCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGTCCTCCAACAAAGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CAA 90 bp GCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTGGCGTCTCCAGGTCAGTTCCTGTGGGTCATCTTaGAAGGTGCTGTCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: AGEVHIGDEQHGWRLQVSSCGSS*KVLSGC
Trigger: GCAGCCAGACAGCACCTTCAAAGATGACCCACAGGA...ACTGACCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CAA 90 bp CTTGACTTTGTTGGAGGACAAGGCAAGGCCTTTGCCACCTGCTGGGGTCCGCAGTTGATGTGGATGGCTTaGGGGGAGCCCAGGGTGTAT +
Preference number: 3 (lower is better)
Translates to: LDFVGGQGKAFATCWGPQLMWMA*GEPRVY
Trigger: ATACACCCTGGGCTCCCCCAAAGCCATCCACATCAA...CTGCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGTCCTCCAACAAAGTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR TCA 72 bp CTGTCTGGCTGCCAGCGCTGTGTGGGCGGCACCCCATaGATGCTCTCAAACAAGGAGTTGAGGGAGCCATTA +
Preference number: 3 (lower is better)
Translates to: LSGCQRCVGGTP*MLSNKELREPL
Trigger: TAATGGCTCCCTCAACTCCTTGTTTGAGAGCATTCATGGGGTGCCGCCCACACAGCGCTGGCAGCCAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR TCA 72 bp TATCTGGGAAGAGCATCGACTCCTGTGGGTCATCTTTaGAGGTGCTGTCTGGCTGCCAGCGCTGTGTGGGCG +
Preference number: 3 (lower is better)
Translates to: YLGRASTPVGHL*RCCLAASAVWA
Trigger: CGCCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAAGATGACCCACAGGAGTCGATGCTCTTCCCAGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR TCA 72 bp CATTCCTCAGCCCCTTCAGGTCTGGGGTCTTCAACATaGGCGCGTCAAACACCTCCTCAGTCTCCCTCCGCA +
Preference number: 3 (lower is better)
Translates to: HSSAPSGLGSST*ARQTPPQSPSA
Trigger: TGCGGAGGGAGACTGAGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTGAGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR GCA 72 bp TTGCTGGAGTCAGGGCACTTGACCTTCCTCCGGAACTaGTTCCGCTCGTCATCGCGCATCTTCCTCTCAGCT +
Preference number: 3 (lower is better)
Translates to: LLESGHLTFLRN*FRSSSRIFLSA
Trigger: AGCTGAGAGGAAGATGCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGTCAAGTGCCCTGACTCCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CAA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACGTCCCTGCTGGCCCCTaGCAGGTCGTGAGGGTTTGG +
Preference number: 3 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYVPAGP*QVVRVW
Trigger: CCAAACCCTCACGACCTGCAAGGGGCCAGCAGGGAC...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CAA 90 bp GGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAGGCAGCACCACACTCTTGACTTaGTTGGAGGACAAGGCAAGG +
Preference number: 3 (lower is better)
Translates to: GRGSNSSVKGEQVRFRGSTTLLT*LEDKAR
Trigger: CCTTGCCTTGTCCTCCAACAAAGTCAAGAGTGTGGT...GCTGCCTCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CAA 90 bp CTTGACCTTCCTCCGGAACTGCTTCCGCTCGTCATCGCGCATCTTCCTCTCAGCACGCCGATGAACACCTaGGCCTCTTCATTCACGTTC +
Preference number: 3 (lower is better)
Translates to: LDLPPELLPLVIAHLPLSTPMNT*ASSFTF
Trigger: GAACGTGAATGAAGAGGCCAAGGTGTTCATCGGCGT...GCTGAGAGGAAGATGCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGTCAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR GCA 72 bp AAGTTTTCTTTGCAGTCAGCCACGTCAATGACCCGCTaGTTGGCAGTGGGTTGCCGGGAATGCCAGTGCTTC +
Preference number: 3 (lower is better)
Translates to: KFSLQSATSMTR*LAVGCRECQCF
Trigger: GAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGTGGCTGACTGCAAAGAAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CCA 72 bp CTTCTCAGAGATCGCATTCCTCAGCCCCTTCAGGTCTaGGGTCTTCAACATGAGCGCGTCAAACACCTCCTC +
Preference number: 3 (lower is better)
Translates to: LLRDRIPQPLQV*GLQHERVKHLL
Trigger: GAGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTGAGGAATGCGATCTCTGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CAA 90 bp GCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTGGCGTCTCCAGGTCAGTACCATCACCACACTCTaGACTTTGTTGGAGGACAAG +
Preference number: 3 (lower is better)
Translates to: AGEVHIGDEQHGWRLQVSTITTL*TLLEDK
Trigger: CTTGTCCTCCAACAAAGTCAAGAGTGTGGTGATGGT...ACTGACCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CCA 72 bp GGAATGCCAGTGCTTCCAGAAGCGCAGCTGCTCTACTaGGACCTTCTCATTGTCGAAGACAACCATCACCAC +
Preference number: 3 (lower is better)
Translates to: GMPVLPEAQLLY*DLLIVEDNHHH
Trigger: GTGGTGATGGTTGTCTTCGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGCTTCTGGAAGCACTGGCATTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR TCA 72 bp GCAAGGCCCCCTCCAAGCTCATCAGGTTATTCTTCTTaGGCAAATCTGGGTACTCTGGGGTTCCAGACACGT +
Preference number: 3 (lower is better)
Translates to: ARPPPSSSGYSS*ANLGTLGFQTR
Trigger: ACGTGTCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGATGAGCTTGGAGGGGGCCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CCA 72 bp TGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTaGGTAGGTGGTAACCATGGTGACATTGTTTTGGGG +
Preference number: 3 (lower is better)
Translates to: CRQGSWEEGTVF*VGGNHGDIVLG
Trigger: CCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CAA 90 bp GGGAACCCATACTTCTCAGAGATCGCATTCCTCAGCCCCTTCAGGTCTGGGGTCGTGTTGAAGTTTTCTTaGCAGTCAGCCACGTCAATG +
Preference number: 3 (lower is better)
Translates to: GNPYFSEIAFLSPFRSGVVLKFS*QSATSM
Trigger: CATTGACGTGGCTGACTGCAAAGAAAACTTCAACAC...GACCCCAGACCTGAAGGGGCTGAGGAATGCGATCTCTGAGAAGTATGGGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CAA 90 bp CCTCAGCCCCTTCAGGTCTGGGGTCTTCAACATGAGCGCGTCAAACACCTCCTCATCAGGTTATTCTTCTaGAGCAAATCTGGGTACTCT +
Preference number: 3 (lower is better)
Translates to: PQPLQVWGLQHERVKHLLIRLFF*SKSGYS
Trigger: AGAGTACCCAGATTTGCTCAAGAAGAATAACCTGAT...GAGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR-3UTR CAA 90 bp GTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCCATGGTGACATTGTTTaGGGGTACGGGGAGGCACTG +
Preference number: 3 (lower is better)
Translates to: VYNSEWQGSSFTQRSLCSHGDIV*GYGEAL
Trigger: CAGTGCCTCCCCGTACCCCAAAACAATGTCACCATG...GGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR-3UTR CAA 90 bp AGCGCAGCTGCTCTACTGGGACCTTCTCATTGTCGAAGACAACCATCACCACACCTCTCAAACAAGGAGTaGAGGGAGCCATTATCATAC +
Preference number: 3 (lower is better)
Translates to: SAAALLGPSHCRRQPSPHLSNKE*REPLSY
Trigger: GTATGATAATGGCTCCCTCAACTCCTTGTTTGAGAG...GTGTGGTGATGGTTGTCTTCGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR TCA 72 bp TGGGCGGCACCCCATGAATGCTCTCAAACAAGGAGTTaGGGGAGCCATTATCATACATATCAGTGGTGGGTA +
Preference number: 3 (lower is better)
Translates to: WAAPHECSQTRS*GSHYHTYQWWV
Trigger: TACCCACCACTGATATGTATGATAATGGCTCCCTCAACTCCTTGTTTGAGAGCATTCATGGGGTGCCGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CCA 72 bp CTCCAAGCTCATCAGGTTATTCTTCTTGAGCAAATCTaGGTACTCTGGGGTTCCAGACACGTTCTCTGTCAG +
Preference number: 3 (lower is better)
Translates to: LQAHQVILLEQI*VLWGSRHVLCQ
Trigger: CTGACAGAGAACGTGTCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGATGAGCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR TCA 72 bp TCGTTAGTGCTATTTACATCCTGCGCTGAGGAAGTCTaGGAAAGAGACTCCAATATAGTGTCTTTTAAAAGT +
Preference number: 3 (lower is better)
Translates to: SLVLFTSCAEEV*ERDSNIVSFKS
Trigger: ACTTTTAAAAGACACTATATTGGAGTCTCTTTCTCAGACTTCCTCAGCGCAGGATGTAAATAGCACTAACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCCGGCCTCCAGCTTGCTaGGGCCTGCAGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GAAPAGVVLREGACAATIRPPAC*GLQGGE
Trigger: CTCCCCTCCCTGCAGGCCCCAGCAAGCTGGAGGCCG...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCAGTGGGGCCACGTCCCTaGTGGCCCCTTGCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPVGPRP*WPLAGR
Trigger: ACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCAC...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCGCCTGTTGGAGCTGCTaGGTCCTGCCGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GAAPAGVVLREGACAATIACWSC*VLPRGL
Trigger: CAGCCCCCTCGGCAGGACCCAGCAGCTCCAACAGGC...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCAGGGCCACGTCCCTGCTaGCCCCTTGCAGGTCGTGAG +
Preference number: 4 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPGPRPC*PLAGRE
Trigger: CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCC...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCAGGTTGTGTGTGGCGTaGGGCCACGTCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GAAPAGVVLREGACAATIRLCVA*GHVPAG
Trigger: GCCAGCAGGGACGTGGCCCCACGCCACACACAACCT...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCAAGTCAGCCACGTCAATaGCCCGCTGCTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPSQPRQ*PAAWQW
Trigger: CCACTGCCAAGCAGCGGGTCATTGACGTGGCTGACT...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCAGTCAGCCACGTCAATaGCCCGCTGCTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GAAPAGVVLREGACAATISQPRQ*PAAWQW
Trigger: CCACTGCCAAGCAGCGGGTCATTGACGTGGCTGACT...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCAGCCCCTTGCAGGTCGTaGGGGTTTGGATGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPAPCRS*GFGCSR
Trigger: TCTCGAGCATCCAAACCCTCACGACCTGCAAGGGGC...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGGCAGCCTGTTGGAGCTaGTGGGTCCTGCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRAACWS*WVLPRG
Trigger: CCCCCTCGGCAGGACCCAGCAGCTCCAACAGGCTGC...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATTTGAAGGTGCTGTCTaGCTGCCAGCGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPFEGAV*LPALCG
Trigger: CCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAA...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGGCCTTTGCCACCTGCTaGGGTCCGCAGGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRAFATC*GPQGDG
Trigger: CCCGTCACCCTGCGGACCCCAGCAGGTGGCAAAGGC...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCAGATGAACAGCACGGGTaGCGTCTCCAGGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPDEQHG*RLQVSL
Trigger: GAGACTGACCTGGAGACGCCACCCGTGCTGTTCATC...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCCTGGGGTCTTCAACATaGGCGCGTCAAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: GAAPAGVVLREGACAATILGSST*ARQTPP
Trigger: AGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAG...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGGGAGCTGCTGGGTCCTaGCGAGGGGGCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKGAAGS*RGGCPS
Trigger: GGAGGGGCAGCCCCCTCGGCAGGACCCAGCAGCTCC...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGCTGCCAGCGCTGTGTaGGCGGCACCCCATGAATGC +
Preference number: 4 (lower is better)
Translates to: EVVCGVGPRPCWPLAGREAASAV*AAPHEC
Trigger: GCATTCATGGGGTGCCGCCCACACAGCGCTGGCAGC...CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCGGGCCACGTCCCTGCTaGCCCCTTGCAGGTCGTGAG +
Preference number: 4 (lower is better)
Translates to: EGACAATILTGSLQEHHCGPRPC*PLAGRE
Trigger: CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCC...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCTGCAGGCTGGAGAAGTaGACATTGGGGATGAACAGC +
Preference number: 4 (lower is better)
Translates to: GAAPAGVVLREGACAATICRLEK*TLGMNS
Trigger: GCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCA...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGGGAGCTGCTGGGTCCTaGCGAGGGGGCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVGAAGS*RGGCPS
Trigger: GGAGGGGCAGCCCCCTCGGCAGGACCCAGCAGCTCC...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCAGCGCAGCTGCTCTACTaGGACCTTCTCATTGTCGAA +
Preference number: 4 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPAQLLY*DLLIVE
Trigger: TTCGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGC...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGTGGAGAGGTTGTGTGTaGCGTGGGGCCACGTCCCTG +
Preference number: 4 (lower is better)
Translates to: EVVCGVGPRPCWPLAGREWRGCV*RGATSL
Trigger: CAGGGACGTGGCCCCACGCCACACACAACCTCTCCA...CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGAAGGAAGACAGAGAGTaGGGGCCGCACCAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRKEDRE*GPHQLA
Trigger: CGCCAGCTGGTGCGGCCCCCACTCTCTGTCTTCCTT...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCAGACAGTTTACGCCGATaGACACCTTGGCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPDSLRR*TPWPLH
Trigger: ATGAAGAGGCCAAGGTGTTCATCGGCGTAAACTGTC...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCTCGTCTCATTGCCCCTaGAGCCCGACAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: EGACAATILTGSLQEHHCSSHCP*SPTAGS
Trigger: GCTGCCTGCTGTCGGGCTTCAGGGGCAATGAGACGA...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGGTGGGTTGCCGGGAATaGCAGTGCTTCCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRVGCRE*QCFQKR
Trigger: GCGCTTCTGGAAGCACTGGCATTCCCGGCAACCCAC...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGTGGGTTGCCGGGAATaGCAGTGCTTCCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: EVVCGVGPRPCWPLAGREVGCRE*QCFQKR
Trigger: GCGCTTCTGGAAGCACTGGCATTCCCGGCAACCCAC...CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGGGAGCTGCTGGGTCCTaGCGAGGGGGCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWGAAGS*RGGCPS
Trigger: GGAGGGGCAGCCCCCTCGGCAGGACCCAGCAGCTCC...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp CCTCAGCCCCTTCAGGTCTGGGGTCTTCAACATGAGCGCGTCAAACACCTCCTCGGAGCTGCTGGGTCCTaGCGAGGGGGCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PQPLQVWGLQHERVKHLLGAAGS*RGGCPS
Trigger: GGAGGGGCAGCCCCCTCGGCAGGACCCAGCAGCTCC...GAGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTCGGCCTCCAGCTTGCTaGGGCCTGCAGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCRPPAC*GLQGGE
Trigger: CTCCCCTCCCTGCAGGCCCCAGCAAGCTGGAGGCCG...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp TGCAGGCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTGGCGTCTCCAGGCGGCCTCCAGCTTGCTaGGGCCTGCAGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: CRLEKCTLGMNSTGGVSRRPPAC*GLQGGE
Trigger: CTCCCCTCCCTGCAGGCCCCAGCAAGCTGGAGGCCG...CCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp GAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGCCTGTGGGTCATCTTTaGAGGTGCTGTCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EVVCGVGPRPCWPLAGREPVGHL*RCCLAA
Trigger: GGCAGCCAGACAGCACCTTCAAAGATGACCCACAGG...CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGTGGAGTCAGGGCACTTaGCCTTCCTCCGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRWSQGT*PSSGTA
Trigger: AGCAGTTCCGGAGGAAGGTCAAGTGCCCTGACTCCA...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGAGTGCACATTGGGGATaGACAGCACGGGTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRSAHWG*TARVAS
Trigger: AGACGCCACCCGTGCTGTTCATCCCCAATGTGCACT...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCTCCTTAAGGATGATCTaGATTTTGCCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GAAPAGVVLREGACAATISLRMI*ILPSSS
Trigger: GGAGCTGGACGGCAAAATTCAGATCATCCTTAAGGA...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCACCTTCCTCCGGAACTaGTTCCGCTCGTCATCGCGC +
Preference number: 4 (lower is better)
Translates to: EGACAATILTGSLQEHHCTFLRN*FRSSSR
Trigger: GCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGT...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTGCAGCCTGTTGGAGCTaGTGGGTCCTGCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCAACWS*WVLPRG
Trigger: CCCCCTCGGCAGGACCCAGCAGCTCCAACAGGCTGC...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGCTCTGTGAATCCCGGTaGCGGCCTCCCCGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKLCESR*RPPRSS
Trigger: GGAAGAGCGGGGAGGCCGGCACCGGGATTCACAGAG...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356046.6
CDS-3UTR GCA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGGCGGGAGGGAGCGTGTaGCGCCACCATCTTAACGGG +
Preference number: 4 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKAGGSV*RHHLNG
Trigger: CCCGTTAAGATGGTGGCGGCACACGCTCCCTCCCGC...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGCTGCCTTGCCAGGGGTaGGCAAGGCCCCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVLPCQG*ARPPPS
Trigger: GCTTGGAGGGGGCCTTGCCCACCCCTGGCAAGGCAG...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp ACGTCAATGACCCGCTGCTTGGCAGTGGGTTGCCGGGAATGCCAGTGCTTCCAGCTGCCTTGCCAGGGGTaGGCAAGGCCCCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: TSMTRCLAVGCRECQCFQLPCQG*ARPPPS
Trigger: GCTTGGAGGGGGCCTTGCCCACCCCTGGCAAGGCAG...CTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGTCGCCTGACTTGATGTaGATGGCTTTGGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRSPDLM*MALGEP
Trigger: GGGCTCCCCCAAAGCCATCCACATCAAGTCAGGCGA...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGGCCTTTGCCACCTGCTaGGGTCCGCAGGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRAFATC*GPQGDG
Trigger: CCCGTCACCCTGCGGACCCCAGCAGGTGGCAAAGGC...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGCCTGTTGGAGCTGCTaGGTCCTGCCGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWACWSC*VLPRGL
Trigger: CAGCCCCCTCGGCAGGACCCAGCAGCTCCAACAGGC...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp GGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAGGCAGCGCCTGTTGGAGCTGCTaGGTCCTGCCGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GRGSNSSVKGEQVRFRGSACWSC*VLPRGL
Trigger: CAGCCCCCTCGGCAGGACCCAGCAGCTCCAACAGGC...GCTGCCTCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCGTGACTCGCCTGACTTaGTGTGGATGGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: EGACAATILTGSLQEHHCVTRLT*CGWLWG
Trigger: CCCCCAAAGCCATCCACATCAAGTCAGGCGAGTCAC...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGCTGGGGTCCGCAGGGTaGCGGGGTAGAACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWLGSAG*RGRTGL
Trigger: AAGGCCAGTTCTACCCCGTCACCCTGCGGACCCCAG...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGTCGTCTCATTGCCCCTaGAGCCCGACAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKSSHCP*SPTAGS
Trigger: GCTGCCTGCTGTCGGGCTTCAGGGGCAATGAGACGA...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCTGCGCTGAGGAAGTCTaGGAAAGAGACTCCAATATA +
Preference number: 4 (lower is better)
Translates to: GAAPAGVVLREGACAATICAEEV*ERDSNI
Trigger: TATATTGGAGTCTCTTTCTCAGACTTCCTCAGCGCA...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATGCGCTGAGGAAGTCTaGGAAAGAGACTCCAATATA +
Preference number: 4 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPCAEEV*ERDSNI
Trigger: TATATTGGAGTCTCTTTCTCAGACTTCCTCAGCGCA...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGAAGGTGCTGTCTGGCTaGCAGCGCTGTGTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRKVLSG*QRCVGG
Trigger: GCCGCCCACACAGCGCTGGCAGCCAGACAGCACCTT...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGCTGCCTTGCCAGGGGTaGGCAAGGCCCCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: CRSTTADKGLGRREQSSGLPCQG*ARPPPS
Trigger: GCTTGGAGGGGGCCTTGCCCACCCCTGGCAAGGCAG...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTGCTGCCAGCGCTGTGTaGGCGGCACCCCATGAATGC +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCAASAV*AAPHEC
Trigger: GCATTCATGGGGTGCCGCCCACACAGCGCTGGCAGC...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGGTAGTCCTCTGGACATaGGGGTTCCGGGGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRVVLWT*GFRGGF
Trigger: AAAACCTCCCCGGAACCCCCATGTCCAGAGGACTAC...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGGCCTTTGCCACCTGCTaGGGTCCGCAGGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWAFATC*GPQGDG
Trigger: CCCGTCACCCTGCGGACCCCAGCAGGTGGCAAAGGC...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACATCAGAGGCAGCCTGTTaGAGCTGCTGGGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTSEAAC*SCWVLP
Trigger: CGGCAGGACCCAGCAGCTCCAACAGGCTGCCTCTGA...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACATGGAGAGGTTGTGTGTaGCGTGGGGCCACGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTWRGCV*RGATSL
Trigger: CAGGGACGTGGCCCCACGCCACACACAACCTCTCCA...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCAGAATTTCTGCAAGTTaGCTGGGTCGTTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: GAAPAGVVLREGACAATIRISAS*LGRSLA
Trigger: TGCTAAAGAACGACCCAGTCAACTTGCAGAAATTCT...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp CTGAAGGTCGCCTTCCTTGGCCTGCTTGGAGGGCAGAGGCTCAAACTCCTCAGTCTGGGGTCCGCAGGGTaGCGGGGTAGAACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LKVAFLGLLGGQRLKLLSLGSAG*RGRTGL
Trigger: AAGGCCAGTTCTACCCCGTCACCCTGCGGACCCCAG...ACTGAGGAGTTTGAGCCTCTGCCCTCCAAGCAGGCCAAGGAAGGCGACCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGACAGCAGGCAGCCCTTaGCGCCACTGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKTAGSP*RHCCWS
Trigger: ACTCCAGCAACAGTGGCGTCAAGGGCTGCCTGCTGT...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTTCGTCTCATTGCCCCTaGAGCCCGACAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCSSHCP*SPTAGS
Trigger: GCTGCCTGCTGTCGGGCTTCAGGGGCAATGAGACGA...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp CCTCAGCCCCTTCAGGTCTGGGGTCTTCAACATGAGCGCGTCAAACACCTCCTCAAGGTGCTGTCTGGCTaGCAGCGCTGTGTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PQPLQVWGLQHERVKHLLKVLSG*QRCVGG
Trigger: GCCGCCCACACAGCGCTGGCAGCCAGACAGCACCTT...GAGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGAAGGCCTTTGCCACCTaGTGGGGTCCGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVKAFAT*WGPQGD
Trigger: GTCACCCTGCGGACCCCAGCAGGTGGCAAAGGCCTT...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGTGCCGGGAATGCCAGTaGTTCCAGAAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKCRECQ*FQKRSC
Trigger: GCAGCTGCGCTTCTGGAAGCACTGGCATTCCCGGCA...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGGCCCCTCCAGAGCGCTaGAGGCTGGAGAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVAPPER*RLEKCT
Trigger: TGTGCACTTCTCCAGCCTGCAGCGCTCTGGAGGGGC...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp GATGAACAGCACGGGTGGCGTCTCCAGGTCAGTCTCTGGCCGAAGGTAGGTCGTGCCCCTCCAGAGCGCTaGAGGCTGGAGAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: DEQHGWRLQVSLWPKVGRAPPER*RLEKCT
Trigger: TGTGCACTTCTCCAGCCTGCAGCGCTCTGGAGGGGC...ACGACCTACCTTCGGCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCATATCCGCTTCTCCTTaGGACCCATGTAGTAATCAT +
Preference number: 4 (lower is better)
Translates to: GAAPAGVVLREGACAATIISASP*DPCSNH
Trigger: ATGATTACTACATGGGTCCCAAGGAGAAGCGGATAT...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGGCTGCCAGCGCTGTGTaGGCGGCACCCCATGAATGC +
Preference number: 4 (lower is better)
Translates to: CRSTTADKGLGRREQSSGAASAV*AAPHEC
Trigger: GCATTCATGGGGTGCCGCCCACACAGCGCTGGCAGC...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GGGTTCCGGGGAGGTTTTCAGGATATCTGGGAAGAGCATCGACTCCTGTGGGTCGCCTTTGCCACCTGCTaGGGTCCGCAGGGTGACGGG +
Preference number: 4 (lower is better)
Translates to: GFRGGFQDIWEEHRLLWVAFATC*GPQGDG
Trigger: CCCGTCACCCTGCGGACCCCAGCAGGTGGCAAAGGC...GACCCACAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACCTCCCCGGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GCCTCTTCCCTCAGGGAAGGCATTCAAGTAACAGCGCTGAGGCATGTGGAGAGGGCCTGTTGGAGCTGCTaGGTCCTGCCGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASSLREGIQVTALRHVERACWSC*VLPRGL
Trigger: CAGCCCCCTCGGCAGGACCCAGCAGCTCCAACAGGC...CCTCTCCACATGCCTCAGCGCTGTTACTTGAATGCCTTCCCTGAGGGAAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp TGCAGGCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTGGCGTCTCCAGGTCAGAGGCAGCCTGTTaGAGCTGCTGGGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: CRLEKCTLGMNSTGGVSRSEAAC*SCWVLP
Trigger: CGGCAGGACCCAGCAGCTCCAACAGGCTGCCTCTGA...CCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGGAAGGTCGCCTTCCTTaGCCTGCTTGGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKEGRLP*PAWRAE
Trigger: CTCTGCCCTCCAAGCAGGCCAAGGAAGGCGACCTTC...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCGGCTTTCAAGGGGAGTaGGGTCCGTCTCATATTCCA +
Preference number: 4 (lower is better)
Translates to: EGACAATILTGSLQEHHCGFQGE*GPSHIP
Trigger: TGGAATATGAGACGGACCTCACTCCCCTTGAAAGCC...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGCCATCACCACACTCTTaGCTTTGTTGGAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: EVVCGVGPRPCWPLAGREPSPHS*LCWRTR
Trigger: CCTTGTCCTCCAACAAAGTCAAGAGTGTGGTGATGG...CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGAGTCAGCCACGTCAATaGCCCGCTGCTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRSQPRQ*PAAWQW
Trigger: CCACTGCCAAGCAGCGGGTCATTGACGTGGCTGACT...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp TGCAGGCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTGGCGTCTCCAGGAGTCAGCCACGTCAATaGCCCGCTGCTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: CRLEKCTLGMNSTGGVSRSQPRQ*PAAWQW
Trigger: CCACTGCCAAGCAGCGGGTCATTGACGTGGCTGACT...CCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGGACAGTTTACGCCGATaGACACCTTGGCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRDSLRR*TPWPLH
Trigger: ATGAAGAGGCCAAGGTGTTCATCGGCGTAAACTGTC...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGACAGCAGGCAGCCCTTaGCGCCACTGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRTAGSP*RHCCWS
Trigger: ACTCCAGCAACAGTGGCGTCAAGGGCTGCCTGCTGT...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp TTGATCTGGCAGACAGCACGGTGTACCAGGCGCTCAGTGCCCAAGCCACAGTCATCGTCTCATTGCCCCTaGAGCCCGACAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LIWQTARCTRRSVPKPQSSSHCP*SPTAGS
Trigger: GCTGCCTGCTGTCGGGCTTCAGGGGCAATGAGACGA...TGACTGTGGCTTGGGCACTGAGCGCCTGGTACACCGTGCTGTCTGCCAGATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp GCGCTGCAGGCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTGGCGTCTCAGTGCACATTGGGGATaGACAGCACGGGTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: ALQAGEVHIGDEQHGWRLSAHWG*TARVAS
Trigger: AGACGCCACCCGTGCTGTTCATCCCCAATGTGCACT...GAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACAGCTCAAACTCCTCAGTaGAGGGCGAGCAGGTACGCT +
Preference number: 4 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTAQTPQ*RASRYA
Trigger: AGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGC...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACAACGTCTGTGGGTCTGTaGCTCAAGGGCCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTTSVGL*LKGLFP
Trigger: AGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGT...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCGCACTGAGGCTCTGCTaGCCGCTTGTCTCTAATTCT +
Preference number: 4 (lower is better)
Translates to: EGACAATILTGSLQEHHCALRLC*PLVSNS
Trigger: AGAATTAGAGACAAGCGGTCAGCAGAGCCTCAGTGC...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGGGTGGGGCTGGGATTTaGATCCAGGTCCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRGGAGI*IQVPLP
Trigger: AGGCAGAGGGACCTGGATTCAAATCCCAGCCCCACC...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGAAGGCCTTTGCCACCTaGTGGGGTCCGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: CRSTTADKGLGRREQSSGKAFAT*WGPQGD
Trigger: GTCACCCTGCGGACCCCAGCAGGTGGCAAAGGCCTT...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGACAAGGCAAGGCCTTTaGCACCTGCTGGGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRTRQGL*HLLGSA
Trigger: TGCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGT...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp ACGTCAATGACCCGCTGCTTGGCAGTGGGTTGCCGGGAATGCCAGTGCTTCCAGTGCCGGGAATGCCAGTaGTTCCAGAAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TSMTRCLAVGCRECQCFQCRECQ*FQKRSC
Trigger: GCAGCTGCGCTTCTGGAAGCACTGGCATTCCCGGCA...CTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGGGTTGCCGGGAATaGCAGTGCTTCCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWVGCRE*QCFQKR
Trigger: GCGCTTCTGGAAGCACTGGCATTCCCGGCAACCCAC...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGACGTCAATGACCCGCTaGTTGGCAGTGGGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRTSMTR*LAVGCR
Trigger: CCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGT...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTACCTTCCTCCGGAACTaGTTCCGCTCGTCATCGCGC +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCTFLRN*FRSSSR
Trigger: GCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGT...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGGCCCCTCCAGAGCGCTaGAGGCTGGAGAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: CRSTTADKGLGRREQSSGAPPER*RLEKCT
Trigger: TGTGCACTTCTCCAGCCTGCAGCGCTCTGGAGGGGC...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp TTGGAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAGCTGCCAGCGCTGTGTaGGCGGCACCCCATGAATGC +
Preference number: 4 (lower is better)
Translates to: LEGRGSNSSVKGEQVRFRAASAV*AAPHEC
Trigger: GCATTCATGGGGTGCCGCCCACACAGCGCTGGCAGC...TCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACATTTGAAGGTGCTGTCTaGCTGCCAGCGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTFEGAV*LPALCG
Trigger: CCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAA...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGCCCGCTGCTTGGCAGTaGGTTGCCGGGAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWPAAWQ*VAGNAS
Trigger: ACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGG...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp CTTGACCTTCCTCCGGAACTGCTTCCGCTCGTCATCGCGCATCTTCCTCTCAGCCCCGCTGCTTGGCAGTaGGTTGCCGGGAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: LDLPPELLPLVIAHLPLSPAAWQ*VAGNAS
Trigger: ACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGG...GCTGAGAGGAAGATGCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACACAGAGCGCTGCAGGCTaGAGAAGTGCACATTGGGGA +
Preference number: 4 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTQSAAG*RSAHWG
Trigger: TCCCCAATGTGCACTTCTCCAGCCTGCAGCGCTCTG...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTCAGAGGCAGCCTGTTaGAGCTGCTGGGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: CRSTTADKGLGRREQSSGSEAAC*SCWVLP
Trigger: CGGCAGGACCCAGCAGCTCCAACAGGCTGCCTCTGA...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GCGCTGCAGGCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTGGCGTCTCCAGCCCCTTCAGGTCTaGGGTCTTCAACATGAGCGC +
Preference number: 4 (lower is better)
Translates to: ALQAGEVHIGDEQHGWRLQPLQV*GLQHER
Trigger: GCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTG...GAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGTTCAAGACAGTCAGGTaGGGGGTGGCGAGACAGGCG +
Preference number: 4 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWFKTVR*GVARQA
Trigger: CGCCTGTCTCGCCACCCCCCACCTGACTGTCTTGAA...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350501.9
3UTR CAA 72 bp CAGCCCTTGACGCCACTGTTGCTGGAGTCAGGGCACTaGACCTTCCTCCGGAACTGCTTCCGCTCGTCATCG +
Preference number: 4 (lower is better)
Translates to: QPLTPLLLESGH*TFLRNCFRSSS
Trigger: CGATGACGAGCGGAAGCAGTTCCGGAGGAAGGTCAAGTGCCCTGACTCCAGCAACAGTGGCGTCAAGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTGTGGGCGGCACCCCATaGATGCTCTCAAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCVGGTP*MLSNKE
Trigger: CTCCTTGTTTGAGAGCATTCATGGGGTGCCGCCCAC...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp GAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAGGCGTGGGCGGCACCCCATaGATGCTCTCAAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: EGRGSNSSVKGEQVRFRGVGGTP*MLSNKE
Trigger: CTCCTTGTTTGAGAGCATTCATGGGGTGCCGCCCAC...GCCTCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGCCTGTGGGTCATCTTTaGAGGTGCTGTCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVPVGHL*RCCLAA
Trigger: GGCAGCCAGACAGCACCTTCAAAGATGACCCACAGG...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGGTGACTCGCCTGACTTaGTGTGGATGGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVVTRLT*CGWLWG
Trigger: CCCCCAAAGCCATCCACATCAAGTCAGGCGAGTCAC...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp ACGTCAATGACCCGCTGCTTGGCAGTGGGTTGCCGGGAATGCCAGTGCTTCCAGTGGAGTCAGGGCACTTaGCCTTCCTCCGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: TSMTRCLAVGCRECQCFQWSQGT*PSSGTA
Trigger: AGCAGTTCCGGAGGAAGGTCAAGTGCCCTGACTCCA...CTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGACAGCAGGCAGCCCTTaGCGCCACTGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: CRSTTADKGLGRREQSSGTAGSP*RHCCWS
Trigger: ACTCCAGCAACAGTGGCGTCAAGGGCTGCCTGCTGT...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGAGTGCACATTGGGGATaGACAGCACGGGTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWSAHWG*TARVAS
Trigger: AGACGCCACCCGTGCTGTTCATCCCCAATGTGCACT...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGGAGAGCTCTCAGATGTaGCCTGCCGTCGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRESSQM*PAVVLP
Trigger: TGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTC...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACACATTCCTGCCCCCAGTaGTGGAGGACAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTHSCPQ*WRTISA
Trigger: AGCGGATATTGTCCTCCAGCACTGGGGGCAGGAATG...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GCCTCTTCCCTCAGGGAAGGCATTCAAGTAACAGCGCTGAGGCATGTGGAGAGGAAGGCCTTTGCCACCTaGTGGGGTCCGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: ASSLREGIQVTALRHVERKAFAT*WGPQGD
Trigger: GTCACCCTGCGGACCCCAGCAGGTGGCAAAGGCCTT...CCTCTCCACATGCCTCAGCGCTGTTACTTGAATGCCTTCCCTGAGGGAAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp TCAATGACCCGCTGCTTGGCAGTGGGTTGCCGGGAATGCCAGTGCTTCCAGAAGGTGGGTTGCCGGGAATaGCAGTGCTTCCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SMTRCLAVGCRECQCFQKVGCRE*QCFQKR
Trigger: GCGCTTCTGGAAGCACTGGCATTCCCGGCAACCCAC...CTTCTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTTGCTTGGCAGTGGGTTaGCGGGAATGCCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCCLAVG*RECQCF
Trigger: GAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCA...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp GGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAGGCAGCTGCTTGGCAGTGGGTTaGCGGGAATGCCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRGSNSSVKGEQVRFRGSCLAVG*RECQCF
Trigger: GAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCA...GCTGCCTCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGTCATCATGGCCTTTGTaGCAGCTGTCAACGGGTTTT +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRSSWPL*QLSTGF
Trigger: AAAACCCGTTGACAGCTGCCACAAAGGCCATGATGA...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGTCCTGCCCCCAGTGCTaGAGGACAATATCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKSCPQC*RTISAS
Trigger: AGAAGCGGATATTGTCCTCCAGCACTGGGGGCAGGA...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGCTTCTTGAGCAAATCTaGGTACTCTGGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRLLEQI*VLWGSR
Trigger: TCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAG...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTTTTGAAGGTGCTGTCTaGCTGCCAGCGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCFEGAV*LPALCG
Trigger: CCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAA...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp GGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAGGCAGCTTTGAAGGTGCTGTCTaGCTGCCAGCGCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GRGSNSSVKGEQVRFRGSFEGAV*LPALCG
Trigger: CCCACACAGCGCTGGCAGCCAGACAGCACCTTCAAA...GCTGCCTCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCGAGCATCGACTCCTGTaGGTCATCTTTGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: EGACAATILTGSLQEHHCEHRLL*VIFEGA
Trigger: AGCACCTTCAAAGATGACCCACAGGAGTCGATGCTC...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGGATGAACAGCACGGGTaGCGTCTCCAGGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVDEQHG*RLQVSL
Trigger: GAGACTGACCTGGAGACGCCACCCGTGCTGTTCATC...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp TGCAGGCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTGGCGTCTCCAGGGATGAACAGCACGGGTaGCGTCTCCAGGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: CRLEKCTLGMNSTGGVSRDEQHG*RLQVSL
Trigger: GAGACTGACCTGGAGACGCCACCCGTGCTGTTCATC...CCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTCAGAGCGCTGCAGGCTaGAGAAGTGCACATTGGGGA +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCQSAAG*RSAHWG
Trigger: TCCCCAATGTGCACTTCTCCAGCCTGCAGCGCTCTG...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp CTTGGAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGGAAGGTCGCCTTCCTTaGCCTGCTTGGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LGGQRLKLLSEGRAGTLQEGRLP*PAWRAE
Trigger: CTCTGCCCTCCAAGCAGGCCAAGGAAGGCGACCTTC...CTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGCAGCCCCTTCAGGTCTaGGGTCTTCAACATGAGCGC +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVQPLQV*GLQHER
Trigger: GCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTG...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGCAGGTCGTGAGGGTTTaGATGCTCGAGAGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKQVVRV*MLERPY
Trigger: GTAAGGCCTCTCGAGCATCCAAACCCTCACGACCTG...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGGGTACGGGGAGGCACTaGCAGGAAGTTCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWGTGRH*QEVQGA
Trigger: TGCTCCCTGAACTTCCTGCCAGTGCCTCCCCGTACC...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGCGAGACAGGCGTGGGTaGAGGAGAGAAGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWRDRRG*RREVSP
Trigger: AGGGGAAACTTCTCTCCTCCACCCACGCCTGTCTCG...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTGTGGCGAGACAGGCGTaGGTGGAGGAGAGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCVARQA*VEERSF
Trigger: GAAACTTCTCTCCTCCACCCACGCCTGTCTCGCCAC...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp GCGCTCAGTGCCCAAGCCACAGTCATAGGTGTCAATCTGCAGGTTCAGGGGGACCCTGTGGGTCATCTTTaGAGGTGCTGTCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALSAQATVIGVNLQVQGDPVGHL*RCCLAA
Trigger: GGCAGCCAGACAGCACCTTCAAAGATGACCCACAGG...GTCCCCCTGAACCTGCAGATTGACACCTATGACTGTGGCTTGGGCACTGAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp CTGAAGGTCGCCTTCCTTGGCCTGCTTGGAGGGCAGAGGCTCAAACTCCTCAGTGTGACTCGCCTGACTTaGTGTGGATGGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LKVAFLGLLGGQRLKLLSVTRLT*CGWLWG
Trigger: CCCCCAAAGCCATCCACATCAAGTCAGGCGAGTCAC...ACTGAGGAGTTTGAGCCTCTGCCCTCCAAGCAGGCCAAGGAAGGCGACCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp AGCACGGTGTACCAGGCGCTCAGTGCCCAAGCCACAGTCATAGGTGTCAATCTGACAGCAGGCAGCCCTTaGCGCCACTGTTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: STVYQALSAQATVIGVNLTAGSP*RHCCWS
Trigger: ACTCCAGCAACAGTGGCGTCAAGGGCTGCCTGCTGT...CAGATTGACACCTATGACTGTGGCTTGGGCACTGAGCGCCTGGTACACCGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp TTGATCTGGCAGACAGCACGGTGTACCAGGCGCTCAGTGCCCAAGCCACAGTCAGCTCAAACTCCTCAGTaGAGGGCGAGCAGGTACGCT +
Preference number: 4 (lower is better)
Translates to: LIWQTARCTRRSVPKPQSAQTPQ*RASRYA
Trigger: AGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGC...TGACTGTGGCTTGGGCACTGAGCGCCTGGTACACCGTGCTGTCTGCCAGATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTACAGCAGAACTCTCTaGAGGTCGCCTTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRYSRTL*RSPSLA
Trigger: GGCCAAGGAAGGCGACCTTCAGAGAGTTCTGCTGTA...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTCTGGGGTCTTCAACATaGGCGCGTCAAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCLGSST*ARQTPP
Trigger: AGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAG...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGTGTTGTTGTCCATGTTaGCTAAGATTCCTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRCCCPC*LRFLAC
Trigger: GCAAGCGAGGAATCTTAGTCAACATGGACAACAACA...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGACGTCTGTGGGTCTGTaGCTCAAGGGCCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: CRSTTADKGLGRREQSSGTSVGL*LKGLFP
Trigger: AGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGT...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGATTTACATCCTGCGCTaGGGAAGTCTGAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRIYILR*GSLRKR
Trigger: TCTCTTTCTCAGACTTCCTCAGCGCAGGATGTAAAT...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGAGGGGCCACATACTCTaGGCTGAGAGCTCTCAGATG +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVRGHIL*AESSQM
Trigger: CATCTGAGAGCTCTCAGCTCAGAGTATGTGGCCCCT...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGGTGTCGAGATTTTGCTaGCAGGTAGGTTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKVSRFC*QVGSQQ
Trigger: CTGCTGGGAACCTACCTGTCAGCAAAATCTCGACAC...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361548.9
CDS-3UTR GCA 90 bp TTGGAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAACAAGGCAAGGCCTTTaGCACCTGCTGGGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: LEGRGSNSSVKGEQVRFRTRQGL*HLLGSA
Trigger: TGCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGT...TCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp GCCTCTTCCCTCAGGGAAGGCATTCAAGTAACAGCGCTGAGGCATGTGGAGAGGACGTCAATGACCCGCTaGTTGGCAGTGGGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: ASSLREGIQVTALRHVERTSMTR*LAVGCR
Trigger: CCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGT...CCTCTCCACATGCCTCAGCGCTGTTACTTGAATGCCTTCCCTGAGGGAAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGGTACCAGGCGCTCAGTaGCCAAGCCACAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWVPGAQ*PSHSHR
Trigger: CCTATGACTGTGGCTTGGGCACTGAGCGCCTGGTAC...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp CTTGACCTTCCTCCGGAACTGCTTCCGCTCGTCATCGCGCATCTTCCTCTCAGCGTACCAGGCGCTCAGTaGCCAAGCCACAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: LDLPPELLPLVIAHLPLSVPGAQ*PSHSHR
Trigger: CCTATGACTGTGGCTTGGGCACTGAGCGCCTGGTAC...GCTGAGAGGAAGATGCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGTCAAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGTTTACCCTTACAAATTaGTCTGTGAATCCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRFTLTN*SVNPGA
Trigger: GGCACCGGGATTCACAGAGCAATTTGTAAGGGTAAA...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356046.6
CDS-3UTR CCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTTCCTGCCCCCAGTGCTaGAGGACAATATCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCSCPQC*RTISAS
Trigger: AGAAGCGGATATTGTCCTCCAGCACTGGGGGCAGGA...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGGTAGTCCTCTGGACATaGGGGTTCCGGGGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVVVLWT*GFRGGF
Trigger: AAAACCTCCCCGGAACCCCCATGTCCAGAGGACTAC...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGCTCCAGGTCAGTCTCTaGCCGAAGGTAGGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: CRSTTADKGLGRREQSSGLQVSL*PKVGRL
Trigger: GAGACGACCTACCTTCGGCCAGAGACTGACCTGGAG...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACAATGGTGACATTGTTTTaGGGTACGGGGAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTMVTLF*GTGRHW
Trigger: CCAGTGCCTCCCCGTACCCCAAAACAATGTCACCAT...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACCCGCACCAGCTGGCGTaGTGCTGCGGGAGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYPHQLA*CCGRER
Trigger: ACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGG...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGAGAATTTCTGCAAGTTaGCTGGGTCGTTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: EVVCGVGPRPCWPLAGRERISAS*LGRSLA
Trigger: TGCTAAAGAACGACCCAGTCAACTTGCAGAAATTCT...CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGGGCTTTCAAGGGGAGTaGGGTCCGTCTCATATTCCA +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRGFQGE*GPSHIP
Trigger: TGGAATATGAGACGGACCTCACTCCCCTTGAAAGCC...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp GCCTCTTCCCTCAGGGAAGGCATTCAAGTAACAGCGCTGAGGCATGTGGAGAGGGTGACTCGCCTGACTTaGTGTGGATGGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ASSLREGIQVTALRHVERVTRLT*CGWLWG
Trigger: CCCCCAAAGCCATCCACATCAAGTCAGGCGAGTCAC...CCTCTCCACATGCCTCAGCGCTGTTACTTGAATGCCTTCCCTGAGGGAAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGCCATCACCACACTCTTaGCTTTGTTGGAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKPSPHS*LCWRTR
Trigger: CCTTGTCCTCCAACAAAGTCAAGAGTGTGGTGATGG...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGTTACAAATTGCTCTGTaGATCCCGGTGCCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWLQIAL*IPVPAS
Trigger: GGAGGCCGGCACCGGGATTCACAGAGCAATTTGTAA...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356046.6
CDS-3UTR TCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGCCACATACTCTGAGCTaGGAGCTCTCAGATGTGACC +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVPHTLS*ELSDVT
Trigger: GGTCACATCTGAGAGCTCTCAGCTCAGAGTATGTGG...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp TTCCGCTCGTCATCGCGCATCTTCCTCTCAGCTCCCTTGTCACAGAAGATCTTGAAGGCCTTTGCCACCTaGTGGGGTCCGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: FRSSSRIFLSAPLSQKILKAFAT*WGPQGD
Trigger: GTCACCCTGCGGACCCCAGCAGGTGGCAAAGGCCTT...CAAGATCTTCTGTGACAAGGGAGCTGAGAGGAAGATGCGCGATGACGAGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp GATGAACAGCACGGGTGGCGTCTCCAGGTCAGTCTCTGGCCGAAGGTAGGTCGTTTCCAGAAGCGCAGCTaGTCTACTGGGACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: DEQHGWRLQVSLWPKVGRFQKRS*STGTFS
Trigger: TGAGAAGGTCCCAGTAGAGCAGCTGCGCTTCTGGAA...ACGACCTACCTTCGGCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGTGCAGGCTGGAGAAGTaGACATTGGGGATGAACAGC +
Preference number: 4 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWCRLEK*TLGMNS
Trigger: GCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCA...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp GATGAACAGCACGGGTGGCGTCTCCAGGTCAGTCTCTGGCCGAAGGTAGGTCGTTGCAGGCTGGAGAAGTaGACATTGGGGATGAACAGC +
Preference number: 4 (lower is better)
Translates to: DEQHGWRLQVSLWPKVGRCRLEK*TLGMNS
Trigger: GCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCA...ACGACCTACCTTCGGCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTCATTCGACATCTTCCTaGTCCCAAGCTCCGACGATC +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCHSTSS*SQAPTI
Trigger: GATCGTCGGAGCTTGGGAGCAGGAAGATGTCGAATG...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTCCTGCCCCCAGTGCTaGAGGACAATATCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: CRSTTADKGLGRREQSSGSCPQC*RTISAS
Trigger: AGAAGCGGATATTGTCCTCCAGCACTGGGGGCAGGA...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GCGCTCAGTGCCCAAGCCACAGTCATAGGTGTCAATCTGCAGGTTCAGGGGGACTCCTGCCCCCAGTGCTaGAGGACAATATCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: ALSAQATVIGVNLQVQGDSCPQC*RTISAS
Trigger: AGAAGCGGATATTGTCCTCCAGCACTGGGGGCAGGA...GTCCCCCTGAACCTGCAGATTGACACCTATGACTGTGGCTTGGGCACTGAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GCGCTGCAGGCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTGGCGTCTCCAAATCTGGGTACTCTaGGGTTCCAGACACGTTCTC +
Preference number: 4 (lower is better)
Translates to: ALQAGEVHIGDEQHGWRLQIWVL*GSRHVL
Trigger: GAGAACGTGTCTGGAACCCCAGAGTACCCAGATTTG...GAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGGTAGTCCTCTGGACATaGGGGTTCCGGGGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWVVLWT*GFRGGF
Trigger: AAAACCTCCCCGGAACCCCCATGTCCAGAGGACTAC...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp CCTCAGCCCCTTCAGGTCTGGGGTCTTCAACATGAGCGCGTCAAACACCTCCTCGTAGTCCTCTGGACATaGGGGTTCCGGGGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: PQPLQVWGLQHERVKHLLVVLWT*GFRGGF
Trigger: AAAACCTCCCCGGAACCCCCATGTCCAGAGGACTAC...GAGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GCCTCTTCCCTCAGGGAAGGCATTCAAGTAACAGCGCTGAGGCATGTGGAGAGGTCGCCTGACTTGATGTaGATGGCTTTGGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ASSLREGIQVTALRHVERSPDLM*MALGEP
Trigger: GGGCTCCCCCAAAGCCATCCACATCAAGTCAGGCGA...CCTCTCCACATGCCTCAGCGCTGTTACTTGAATGCCTTCCCTGAGGGAAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GGGAAGAGCATCGACTCCTGTGGGTCATCTTTGAAGGTGCTGTCTGGCTGCCAGTCGCCTGACTTGATGTaGATGGCTTTGGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GKSIDSCGSSLKVLSGCQSPDLM*MALGEP
Trigger: GGGCTCCCCCAAAGCCATCCACATCAAGTCAGGCGA...CTGGCAGCCAGACAGCACCTTCAAAGATGACCCACAGGAGTCGATGCTCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGGCGCAGCTGCTCTACTaGGACCTTCTCATTGTCGAA +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRAQLLY*DLLIVE
Trigger: TTCGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGC...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp ACGTCAATGACCCGCTGCTTGGCAGTGGGTTGCCGGGAATGCCAGTGCTTCCAGGCGCAGCTGCTCTACTaGGACCTTCTCATTGTCGAA +
Preference number: 4 (lower is better)
Translates to: TSMTRCLAVGCRECQCFQAQLLY*DLLIVE
Trigger: TTCGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGC...CTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp CTTGACCTTCCTCCGGAACTGCTTCCGCTCGTCATCGCGCATCTTCCTCTCAGCCTTCCTTGGCCTGCTTaGAGGGCAGAGGCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LDLPPELLPLVIAHLPLSLPWPA*RAEAQT
Trigger: AGTTTGAGCCTCTGCCCTCCAAGCAGGCCAAGGAAG...GCTGAGAGGAAGATGCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGGATTCAAGCATACCATaGGGATCCAGGCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: CRSTTADKGLGRREQSSGDSSIP*GSRPGD
Trigger: GTCCCCTGGCCTGGATCCCCATGGTATGCTTGAATC...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGGATTCAAGCATACCATaGGGATCCAGGCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWDSSIP*GSRPGD
Trigger: GTCCCCTGGCCTGGATCCCCATGGTATGCTTGAATC...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTCACCTCTCCTCCAGGTaGGTGTGTCATTCCGAGTTT +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCHLSSR*VCHSEF
Trigger: AAACTCGGAATGACACACCCACCTGGAGGAGAGGTG...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACAATTCAAAGTCACTTTTaGGGCTGGGGTAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTIQSHF*GWGSPL
Trigger: CAGAGGACTACCCCAGCCTCAAAAGTGACTTTGAAT...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGCCATCACCACACTCTTaGCTTTGTTGGAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRPSPHS*LCWRTR
Trigger: CCTTGTCCTCCAACAAAGTCAAGAGTGTGGTGATGG...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp TGTCTGGCTGCCAGCGCTGTGTGGGCGGCACCCCATGAATGCTCTCAAACAAGGCCATCACCACACTCTTaGCTTTGTTGGAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: CLAASAVWAAPHECSQTRPSPHS*LCWRTR
Trigger: CCTTGTCCTCCAACAAAGTCAAGAGTGTGGTGATGG...CCTTGTTTGAGAGCATTCATGGGGTGCCGCCCACACAGCGCTGGCAGCCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGACAGTTTACGCCGATaGACACCTTGGCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWDSLRR*TPWPLH
Trigger: ATGAAGAGGCCAAGGTGTTCATCGGCGTAAACTGTC...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp GGGAAGAGCATCGACTCCTGTGGGTCATCTTTGAAGGTGCTGTCTGGCTGCCAGTACAGCAGAACTCTCTaGAGGTCGCCTTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GKSIDSCGSSLKVLSGCQYSRTL*RSPSLA
Trigger: GGCCAAGGAAGGCGACCTTCAGAGAGTTCTGCTGTA...CTGGCAGCCAGACAGCACCTTCAAAGATGACCCACAGGAGTCGATGCTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp GGGTTCCGGGGAGGTTTTCAGGATATCTGGGAAGAGCATCGACTCCTGTGGGTCCTGGGGTCTTCAACATaGGCGCGTCAAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: GFRGGFQDIWEEHRLLWVLGSST*ARQTPP
Trigger: AGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAG...GACCCACAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACCTCCCCGGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp GGGTTCCGGGGAGGTTTTCAGGATATCTGGGAAGAGCATCGACTCCTGTGGGTCCATTCCTGCCCCCAGTaGTGGAGGACAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: GFRGGFQDIWEEHRLLWVHSCPQ*WRTISA
Trigger: AGCGGATATTGTCCTCCAGCACTGGGGGCAGGAATG...GACCCACAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACCTCCCCGGAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGCCACACAAAGGACAGTaGATTATAGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWPHKGQ*IIGHLL
Trigger: GAGGAGGTGGCCTATAATGCACTGTCCTTTGTGTGG...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGTGCAGGCTGGAGAAGTaGACATTGGGGATGAACAGC +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWCRLEK*TLGMNS
Trigger: GCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCA...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGGAATCCAGGTCCCTCTaGCTCCAAAATCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRESRSL*LQNPSP
Trigger: TGGAGATGGATTTTGGAGGCAGAGGGACCTGGATTC...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGGAGTTTACAGTGAAGTaGAGGCTGTTGACGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVEFTVK*RLLTVV
Trigger: CACCACCGTCAACAGCCTGCACTTCACTGTAAACTC...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACATCATCATGGCCTTTGTaGCAGCTGTCAACGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTSSWPL*QLSTGF
Trigger: AAAACCCGTTGACAGCTGCCACAAAGGCCATGATGA...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGCAAATCTGGGTACTCTaGGGTTCCAGACACGTTCTC +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVQIWVL*GSRHVL
Trigger: GAGAACGTGTCTGGAACCCCAGAGTACCCAGATTTG...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATCTGCCTTGCCAGGGGTaGGCAAGGCCCCCTCCAAGC +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDLPCQG*ARPPPS
Trigger: GCTTGGAGGGGGCCTTGCCCACCCCTGGCAAGGCAG...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCCGGCCTCCAGCTTGCTaGGGCCTGCAGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VYNSEWQGSSFTQRSLCSRPPAC*GLQGGE
Trigger: CTCCCCTCCCTGCAGGCCCCAGCAAGCTGGAGGCCG...GGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTGAGCATCGACTCCTGTaGGTCATCTTTGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCEHRLL*VIFEGA
Trigger: AGCACCTTCAAAGATGACCCACAGGAGTCGATGCTC...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGCAGAAGATCTTGATCTaGCAGACAGCACGGTGTACC +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVQKILI*QTARCT
Trigger: GGTACACCGTGCTGTCTGCCAGATCAAGATCTTCTG...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp GAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGTATACAACAGTGAGTaGCAAGGCAGTAGTTTTACA +
Preference number: 4 (lower is better)
Translates to: EVVCGVGPRPCWPLAGREVYNSE*QGSSFT
Trigger: TGTAAAACTACTGCCTTGCCACTCACTGTTGTATAC...CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR CAA 72 bp TTTTCTTTGCAGTCAGCCACGTCAATGACCCGCTGCTaGGCAGTGGGTTGCCGGGAATGCCAGTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FSLQSATSMTRC*AVGCRECQCFQ
Trigger: CTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGTGGCTGACTGCAAAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGATTCAAAGTCACTTTTaGGGCTGGGGTAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRIQSHF*GWGSPL
Trigger: CAGAGGACTACCCCAGCCTCAAAAGTGACTTTGAAT...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp ACGTCAATGACCCGCTGCTTGGCAGTGGGTTGCCGGGAATGCCAGTGCTTCCAGATTCAAAGTCACTTTTaGGGCTGGGGTAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TSMTRCLAVGCRECQCFQIQSHF*GWGSPL
Trigger: CAGAGGACTACCCCAGCCTCAAAAGTGACTTTGAAT...CTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp CTTGACTTTGTTGGAGGACAAGGCAAGGCCTTTGCCACCTGCTGGGGTCCGCAGGACAGTTTACGCCGATaGACACCTTGGCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LDFVGGQGKAFATCWGPQDSLRR*TPWPLH
Trigger: ATGAAGAGGCCAAGGTGTTCATCGGCGTAAACTGTC...CTGCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGTCCTCCAACAAAGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATCCAGCCTCCACGCTCTaGGAGCGGCAGGTATCCACC +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDPASTL*ERQVST
Trigger: GGTGGATACCTGCCGCTCTCAGAGCGTGGAGGCTGG...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356046.6
CDS-3UTR TCA 90 bp AGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGAGTTTTCAAGTTAACTaGCCAAAGGTTGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: RLCVAWGHVPAGPLQVVRSFQVN*PKVEKS
Trigger: GGATTTCTCAACCTTTGGTCAGTTAACTTGAAAACT...CCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp TGTCTGGCTGCCAGCGCTGTGTGGGCGGCACCCCATGAATGCTCTCAAACAAGGGCCACCTCCTCAATGTaGTCCACAGTGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: CLAASAVWAAPHECSQTRATSSM*STVLKF
Trigger: AAACTTCAACACTGTGGAGCACATTGAGGAGGTGGC...CCTTGTTTGAGAGCATTCATGGGGTGCCGCCCACACAGCGCTGGCAGCCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp CTTGACTTTGTTGGAGGACAAGGCAAGGCCTTTGCCACCTGCTGGGGTCCGCAGCCACACAAAGGACAGTaGATTATAGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: LDFVGGQGKAFATCWGPQPHKGQ*IIGHLL
Trigger: GAGGAGGTGGCCTATAATGCACTGTCCTTTGTGTGG...CTGCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGTCCTCCAACAAAGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTGTGAGGAAAAGTCTGTaGTCAGACAGTTTACGCCGA +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCVRKSL*SDSLRR
Trigger: TCGGCGTAAACTGTCTGAGCACAGACTTTTCCTCAC...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp GGCAAGGCCCCCTCCAAGCTCATCAGGTTATTCTTCTTGAGCAAATCTGGGTACACCTTCCTCCGGAACTaGTTCCGCTCGTCATCGCGC +
Preference number: 4 (lower is better)
Translates to: GKAPSKLIRLFFLSKSGYTFLRN*FRSSSR
Trigger: GCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGT...GTACCCAGATTTGCTCAAGAAGAATAACCTGATGAGCTTGGAGGGGGCCTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp CAAGCTCATCAGGTTATTCTTCTTGAGCAAATCTGGGTACTCTGGGGTTCCAGAGCAGCCTGTTGGAGCTaGTGGGTCCTGCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QAHQVILLEQIWVLWGSRAACWS*WVLPRG
Trigger: CCCCCTCGGCAGGACCCAGCAGCTCCAACAGGCTGC...TCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGATGAGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTCATCATGGCCTTTGTaGCAGCTGTCAACGGGTTTT +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRSSWPL*QLSTGF
Trigger: AAAACCCGTTGACAGCTGCCACAAAGGCCATGATGA...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGCAAATCTGGGTACTCTaGGGTTCCAGACACGTTCTC +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWQIWVL*GSRHVL
Trigger: GAGAACGTGTCTGGAACCCCAGAGTACCCAGATTTG...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGGGTTTTCAGGATATCTaGGAAGAGCATCGACTCCTG +
Preference number: 4 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVGFQDI*EEHRLL
Trigger: CAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACC...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp GCCTCTTCCCTCAGGGAAGGCATTCAAGTAACAGCGCTGAGGCATGTGGAGAGGGCGCAGCTGCTCTACTaGGACCTTCTCATTGTCGAA +
Preference number: 4 (lower is better)
Translates to: ASSLREGIQVTALRHVERAQLLY*DLLIVE
Trigger: TTCGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGC...CCTCTCCACATGCCTCAGCGCTGTTACTTGAATGCCTTCCCTGAGGGAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACCCCGCTGCTTGGCAGTaGGTTGCCGGGAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYPAAWQ*VAGNAS
Trigger: ACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGG...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AGCGCAGCTGCTCTACTGGGACCTTCTCATTGTCGAAGACAACCATCACCACACCTCCAGGTCAGTCTCTaGCCGAAGGTAGGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: SAAALLGPSHCRRQPSPHLQVSL*PKVGRL
Trigger: GAGACGACCTACCTTCGGCCAGAGACTGACCTGGAG...GTGTGGTGATGGTTGTCTTCGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GCCTCTTCCCTCAGGGAAGGCATTCAAGTAACAGCGCTGAGGCATGTGGAGAGGATGGTGACATTGTTTTaGGGTACGGGGAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: ASSLREGIQVTALRHVERMVTLF*GTGRHW
Trigger: CCAGTGCCTCCCCGTACCCCAAAACAATGTCACCAT...CCTCTCCACATGCCTCAGCGCTGTTACTTGAATGCCTTCCCTGAGGGAAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGGAGGGAACAGTCTTCTaGGTAGGTGGTAACCATGGT +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWEGTVF*VGGNHG
Trigger: ACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTTGTGCTCCACAGTGTTaGAGTTTTCTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCCAPQC*SFLCSQ
Trigger: CTGACTGCAAAGAAAACTTCAACACTGTGGAGCACA...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp CTTGGAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGTCCTTAAGGATGATCTaGATTTTGCCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGGQRLKLLSEGRAGTLQSLRMI*ILPSSS
Trigger: GGAGCTGGACGGCAAAATTCAGATCATCCTTAAGGA...CTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGCCGTCTCATATTCCATaGCATGGTAGTACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRPSHIP*HGSTSF
Trigger: GAAAGAGGTACTACCATGGCATGGAATATGAGACGG...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGCAGCCTGTTGGAGCTaGTGGGTCCTGCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPAACWS*WVLPRG
Trigger: CCCCCTCGGCAGGACCCAGCAGCTCCAACAGGCTGC...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp CTTGACTTTGTTGGAGGACAAGGCAAGGCCTTTGCCACCTGCTGGGGTCCGCAGCTTCTTGAGCAAATCTaGGTACTCTGGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LDFVGGQGKAFATCWGPQLLEQI*VLWGSR
Trigger: TCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAG...CTGCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGTCCTCCAACAAAGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GGGTTCCGGGGAGGTTTTCAGGATATCTGGGAAGAGCATCGACTCCTGTGGGTCCAGAAGATCTTGATCTaGCAGACAGCACGGTGTACC +
Preference number: 4 (lower is better)
Translates to: GFRGGFQDIWEEHRLLWVQKILI*QTARCT
Trigger: GGTACACCGTGCTGTCTGCCAGATCAAGATCTTCTG...GACCCACAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACCTCCCCGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp ATGTGGATGGCTTTGGGGGAGCCCAGGGTGTATTCAAAGTCACTTTTGAGGCTGCAGAGCGCTGCAGGCTaGAGAAGTGCACATTGGGGA +
Preference number: 4 (lower is better)
Translates to: MWMALGEPRVYSKSLLRLQSAAG*RSAHWG
Trigger: TCCCCAATGTGCACTTCTCCAGCCTGCAGCGCTCTG...CAGCCTCAAAAGTGACTTTGAATACACCCTGGGCTCCCCCAAAGCCATCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCGCACCAGCTGGCGTaGTGCTGCGGGAGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVPHQLA*CCGRER
Trigger: ACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGG...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR CAA 72 bp GGCAAGGCCCCCTCCAAGCTCATCAGGTTATTCTTCTaGAGCAAATCTGGGTACTCTGGGGTTCCAGACACG +
Preference number: 4 (lower is better)
Translates to: GKAPSKLIRLFF*SKSGYSGVPDT
Trigger: CGTGTCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGATGAGCTTGGAGGGGGCCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528064.5
3UTR CAA 72 bp GCCATGGGTGACTCGCCTGACTTGATGTGGATGGCTTaGGGGGAGCCCAGGGTGTATTCAAAGTCACTTTTG +
Preference number: 4 (lower is better)
Translates to: AMGDSPDLMWMA*GEPRVYSKSLL
Trigger: CAAAAGTGACTTTGAATACACCCTGGGCTCCCCCAAAGCCATCCACATCAAGTCAGGCGAGTCACCCATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTAGAATTTCTGCAAGTTaGCTGGGTCGTTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCRISAS*LGRSLA
Trigger: TGCTAAAGAACGACCCAGTCAACTTGCAGAAATTCT...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTCAGGTTATTCTTCTTaGGCAAATCTGGGTACTCTG +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRSGYSS*ANLGTL
Trigger: CAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGA...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp GGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAGGCAGCTCAGGTTATTCTTCTTaGGCAAATCTGGGTACTCTG +
Preference number: 4 (lower is better)
Translates to: GRGSNSSVKGEQVRFRGSSGYSS*ANLGTL
Trigger: CAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGA...GCTGCCTCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACGTGGGCGGCACCCCATaGATGCTCTCAAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYVGGTP*MLSNKE
Trigger: CTCCTTGTTTGAGAGCATTCATGGGGTGCCGCCCAC...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACCCTGTGGGTCATCTTTaGAGGTGCTGTCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYPVGHL*RCCLAA
Trigger: GGCAGCCAGACAGCACCTTCAAAGATGACCCACAGG...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCACTGGGGTCCGCAGGGTaGCGGGGTAGAACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPLGSAG*RGRTGL
Trigger: AAGGCCAGTTCTACCCCGTCACCCTGCGGACCCCAG...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGTGTGCTCCACAGTGTTaGAGTTTTCTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWCAPQC*SFLCSQ
Trigger: CTGACTGCAAAGAAAACTTCAACACTGTGGAGCACA...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GCGCTCAGTGCCCAAGCCACAGTCATAGGTGTCAATCTGCAGGTTCAGGGGGACTGTGCTCCACAGTGTTaGAGTTTTCTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ALSAQATVIGVNLQVQGDCAPQC*SFLCSQ
Trigger: CTGACTGCAAAGAAAACTTCAACACTGTGGAGCACA...GTCCCCCTGAACCTGCAGATTGACACCTATGACTGTGGCTTGGGCACTGAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACTGGAGTCAGGGCACTTaGCCTTCCTCCGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYWSQGT*PSSGTA
Trigger: AGCAGTTCCGGAGGAAGGTCAAGTGCCCTGACTCCA...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACGCTCAAACTCCTCAGTaGAGGGCGAGCAGGTACGCT +
Preference number: 4 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYAQTPQ*RASRYA
Trigger: AGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGC...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp CTTGGAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGTGTTGTTGTCCATGTTaGCTAAGATTCCTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: LGGQRLKLLSEGRAGTLQCCCPC*LRFLAC
Trigger: GCAAGCGAGGAATCTTAGTCAACATGGACAACAACA...CTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATTGCCGGGAATGCCAGTaGTTCCAGAAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDCRECQ*FQKRSC
Trigger: GCAGCTGCGCTTCTGGAAGCACTGGCATTCCCGGCA...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATACGTCAATGACCCGCTaGTTGGCAGTGGGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDTSMTR*LAVGCR
Trigger: CCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGT...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp TTGGAGGGCAGAGGCTCAAACTCCTCAGTGAAGGGCGAGCAGGTACGCTTCAGAGTGAGGAAAAGTCTGTaGTCAGACAGTTTACGCCGA +
Preference number: 4 (lower is better)
Translates to: LEGRGSNSSVKGEQVRFRVRKSL*SDSLRR
Trigger: TCGGCGTAAACTGTCTGAGCACAGACTTTTCCTCAC...TCTGAAGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGCCTCTGCCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp GTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCGCCCCTCCAGAGCGCTaGAGGCTGGAGAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: VYNSEWQGSSFTQRSLCSAPPER*RLEKCT
Trigger: TGTGCACTTCTCCAGCCTGCAGCGCTCTGGAGGGGC...GGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTGTGGGGCCACGTCCCTaGTGGCCCCTTGCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVVGPRP*WPLAGR
Trigger: ACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCAC...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTCACCAGCTGGCGTGGTaGTGCGGGAGGGAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCHQLAW*CGRERV
Trigger: CACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTG...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCAGACACTTGTCTCTAATTCTTaGCTGACACAGACATTCTCT +
Preference number: 4 (lower is better)
Translates to: SVCRHHLNGQPAGAPLQTLVSNS*LTQTFS
Trigger: AGAGAATGTCTGTGTCAGGCAAGAATTAGAGACAAG...TGTCTGCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361548.9
CDS-3UTR CCA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGATATCCGCTTCTCCTTaGGACCCATGTAGTAATCAT +
Preference number: 4 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWISASP*DPCSNH
Trigger: ATGATTACTACATGGGTCCCAAGGAGAAGCGGATAT...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp GCCTCTTCCCTCAGGGAAGGCATTCAAGTAACAGCGCTGAGGCATGTGGAGAGGCTTCTTGAGCAAATCTaGGTACTCTGGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ASSLREGIQVTALRHVERLLEQI*VLWGSR
Trigger: TCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAG...CCTCTCCACATGCCTCAGCGCTGTTACTTGAATGCCTTCCCTGAGGGAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACCAGAGCGCTGCAGGCTaGAGAAGTGCACATTGGGGA +
Preference number: 4 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYQSAAG*RSAHWG
Trigger: TCCCCAATGTGCACTTCTCCAGCCTGCAGCGCTCTG...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAAGGTTGTGTGTGGCGTaGGGCCACGTCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPRLCVA*GHVPAG
Trigger: GCCAGCAGGGACGTGGCCCCACGCCACACACAACCT...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATAGCGCTGGCGCTGATTaGCTACAGGTACAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDSAGAD*LQVQVP
Trigger: CGGCACCTGTACCTGTAGCCAATCAGCGCCAGCGCT...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361548.9
CDS-3UTR TCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTCTGGGGTCCGCAGGGTaGCGGGGTAGAACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCLGSAG*RGRTGL
Trigger: AAGGCCAGTTCTACCCCGTCACCCTGCGGACCCCAG...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACCATTCCTGCCCCCAGTaGTGGAGGACAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYHSCPQ*WRTISA
Trigger: AGCGGATATTGTCCTCCAGCACTGGGGGCAGGAATG...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTAAGGTGCTGTCTGGCTaGCAGCGCTGTGTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCKVLSG*QRCVGG
Trigger: GCCGCCCACACAGCGCTGGCAGCCAGACAGCACCTT...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTAAGGTGCTGTCTGGCTaGCAGCGCTGTGTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVKVLSG*QRCVGG
Trigger: GCCGCCCACACAGCGCTGGCAGCCAGACAGCACCTT...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCACAAGGCAAGGCCTTTaGCACCTGCTGGGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: VYNSEWQGSSFTQRSLCSTRQGL*HLLGSA
Trigger: TGCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGT...GGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp CAAGCTCATCAGGTTATTCTTCTTGAGCAAATCTGGGTACTCTGGGGTTCCAGAACGTCAATGACCCGCTaGTTGGCAGTGGGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: QAHQVILLEQIWVLWGSRTSMTR*LAVGCR
Trigger: CCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGT...TCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGATGAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR GCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTGCGGGAGGGAGCGTGTaGCGCCACCATCTTAACGGG +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCAGGSV*RHHLNG
Trigger: CCCGTTAAGATGGTGGCGGCACACGCTCCCTCCCGC...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGCTTGTCTCTAATTCTTaGCTGACACAGACATTCTCT +
Preference number: 4 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRLVSNS*LTQTFS
Trigger: AGAGAATGTCTGTGTCAGGCAAGAATTAGAGACAAG...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp GCCTCTTCCCTCAGGGAAGGCATTCAAGTAACAGCGCTGAGGCATGTGGAGAGGCATACATATCAGTGGTaGGTAACAGGTAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ASSLREGIQVTALRHVERHTYQW*VTGSCP
Trigger: TGGACAGCTACCTGTTACCCACCACTGATATGTATG...CCTCTCCACATGCCTCAGCGCTGTTACTTGAATGCCTTCCCTGAGGGAAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AGCGCAGCTGCTCTACTGGGACCTTCTCATTGTCGAAGACAACCATCACCACACGAGCATCGACTCCTGTaGGTCATCTTTGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SAAALLGPSHCRRQPSPHEHRLL*VIFEGA
Trigger: AGCACCTTCAAAGATGACCCACAGGAGTCGATGCTC...GTGTGGTGATGGTTGTCTTCGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATCTCCAGGTCAGTCTCTaGCCGAAGGTAGGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDLQVSL*PKVGRL
Trigger: GAGACGACCTACCTTCGGCCAGAGACTGACCTGGAG...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATCAGCCCCTTCAGGTCTaGGGTCTTCAACATGAGCGC +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDQPLQV*GLQHER
Trigger: GCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTG...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCGGTACGGGGAGGCACTaGCAGGAAGTTCAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: VYNSEWQGSSFTQRSLCSGTGRH*QEVQGA
Trigger: TGCTCCCTGAACTTCCTGCCAGTGCCTCCCCGTACC...GGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAAAGGAAGACAGAGAGTaGGGGCCGCACCAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPKEDRE*GPHQLA
Trigger: CGCCAGCTGGTGCGGCCCCCACTCTCTGTCTTCCTT...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATTACAGCAGAACTCTCTaGAGGTCGCCTTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDYSRTL*RSPSLA
Trigger: GGCCAAGGAAGGCGACCTTCAGAGAGTTCTGCTGTA...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGCCCCTTGCAGGTCGTaGGGGTTTGGATGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPAPCRS*GFGCSR
Trigger: TCTCGAGCATCCAAACCCTCACGACCTGCAAGGGGC...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCACAGCAGCGCTGGCGCTaGTTGGCTACAGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPQQRWR*LATGTG
Trigger: ACCTGTACCTGTAGCCAATCAGCGCCAGCGCTGCTG...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361548.9
CDS-3UTR TCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGGTGTTTGATTTATGTTaGGGTTTGGGTGTCGAGATT +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWVFDLC*GLGVEI
Trigger: AATCTCGACACCCAAACCTCAACATAAATCAAACAC...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361548.9
CDS-3UTR GCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAACAAGGCAAGGCCTTTaGCACCTGCTGGGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPTRQGL*HLLGSA
Trigger: TGCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGT...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAACCTTCCTCCGGAACTaGTTCCGCTCGTCATCGCGC +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPTFLRN*FRSSSR
Trigger: GCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGT...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGTATCATACATATCAGTaGTGGGTAACAGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWYHTYQ*WVTGSC
Trigger: ACAGCTACCTGTTACCCACCACTGATATGTATGATA...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp GCGCTCAGTGCCCAAGCCACAGTCATAGGTGTCAATCTGCAGGTTCAGGGGGACTATCATACATATCAGTaGTGGGTAACAGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: ALSAQATVIGVNLQVQGDYHTYQ*WVTGSC
Trigger: ACAGCTACCTGTTACCCACCACTGATATGTATGATA...GTCCCCCTGAACCTGCAGATTGACACCTATGACTGTGGCTTGGGCACTGAGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp AGCGCAGCTGCTCTACTGGGACCTTCTCATTGTCGAAGACAACCATCACCACACGGTTTTCAGGATATCTaGGAAGAGCATCGACTCCTG +
Preference number: 4 (lower is better)
Translates to: SAAALLGPSHCRRQPSPHGFQDI*EEHRLL
Trigger: CAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACC...GTGTGGTGATGGTTGTCTTCGACAATGAGAAGGTCCCAGTAGAGCAGCTGCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGACCCGCTGCTTGGCAGTaGGTTGCCGGGAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRPAAWQ*VAGNAS
Trigger: ACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGG...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGATCAGAGGCAGCCTGTTaGAGCTGCTGGGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRSEAAC*SCWVLP
Trigger: CGGCAGGACCCAGCAGCTCCAACAGGCTGCCTCTGA...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATCTTCCTTGGCCTGCTTaGAGGGCAGAGGCTCAAACT +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDLPWPA*RAEAQT
Trigger: AGTTTGAGCCTCTGCCCTCCAAGCAGGCCAAGGAAG...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATCAGGTCGTGAGGGTTTaGATGCTCGAGAGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDQVVRV*MLERPY
Trigger: GTAAGGCCTCTCGAGCATCCAAACCCTCACGACCTG...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGAGTTTTCAAGTTAACTaGCCAAAGGTTGAGAAATCC +
Preference number: 4 (lower is better)
Translates to: CRSTTADKGLGRREQSSGSFQVN*PKVEKS
Trigger: GGATTTCTCAACCTTTGGTCAGTTAACTTGAAAACT...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGATCCGACGATCAGCACTaGGGCTCTGCTGACCGCTTG +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRSDDQH*GSADRL
Trigger: CAAGCGGTCAGCAGAGCCTCAGTGCTGATCGTCGGA...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTTCCGACGATCAGCACTaGGGCTCTGCTGACCGCTTG +
Preference number: 4 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVSDDQH*GSADRL
Trigger: CAAGCGGTCAGCAGAGCCTCAGTGCTGATCGTCGGA...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361548.9
CDS-3UTR GCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATTTCCAGAAGCGCAGCTaGTCTACTGGGACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDFQKRS*STGTFS
Trigger: TGAGAAGGTCCCAGTAGAGCAGCTGCGCTTCTGGAA...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGATGCCGGGAATGCCAGTaGTTCCAGAAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRCRECQ*FQKRSC
Trigger: GCAGCTGCGCTTCTGGAAGCACTGGCATTCCCGGCA...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCATGCTTGGCAGTGGGTTaGCGGGAATGCCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPCLAVG*RECQCF
Trigger: GAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCA...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTACCAGGCGCTCAGTaGCCAAGCCACAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPVPGAQ*PSHSHR
Trigger: CCTATGACTGTGGCTTGGGCACTGAGCGCCTGGTAC...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp CCTCAGCCCCTTCAGGTCTGGGGTCTTCAACATGAGCGCGTCAAACACCTCCTCCTAAGATTCCTCGCTTaGATTTCTTGTAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: PQPLQVWGLQHERVKHLLLRFLA*ISCRLC
Trigger: ACAAAGTCTACAAGAAATGCAAGCGAGGAATCTTAG...GAGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp TTCCGCTCGTCATCGCGCATCTTCCTCTCAGCTCCCTTGTCACAGAAGATCTTGCATACATATCAGTGGTaGGTAACAGGTAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: FRSSSRIFLSAPLSQKILHTYQW*VTGSCP
Trigger: TGGACAGCTACCTGTTACCCACCACTGATATGTATG...CAAGATCTTCTGTGACAAGGGAGCTGAGAGGAAGATGCGCGATGACGAGCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACCAGAAGATCTTGATCTaGCAGACAGCACGGTGTACC +
Preference number: 4 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYQKILI*QTARCT
Trigger: GGTACACCGTGCTGTCTGCCAGATCAAGATCTTCTG...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGAGAAGGTCGCCTTCCTTaGCCTGCTTGGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELREGRLP*PAWRAE
Trigger: CTCTGCCCTCCAAGCAGGCCAAGGAAGGCGACCTTC...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTGAAGGTCGCCTTCCTTaGCCTGCTTGGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVEGRLP*PAWRAE
Trigger: CTCTGCCCTCCAAGCAGGCCAAGGAAGGCGACCTTC...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATTGCAGACAAGGGTCTTaGGAGGAGGGAACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDCRQGS*EEGTVF
Trigger: GAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCA...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTGTGGGCGGCACCCCATaGATGCTCTCAAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVVGGTP*MLSNKE
Trigger: CTCCTTGTTTGAGAGCATTCATGGGGTGCCGCCCAC...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGATGGAGTCAGGGCACTTaGCCTTCCTCCGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRWSQGT*PSSGTA
Trigger: AGCAGTTCCGGAGGAAGGTCAAGTGCCCTGACTCCA...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTAGTGCACATTGGGGATaGACAGCACGGGTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVSAHWG*TARVAS
Trigger: AGACGCCACCCGTGCTGTTCATCCCCAATGTGCACT...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGAGCTCAAACTCCTCAGTaGAGGGCGAGCAGGTACGCT +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRAQTPQ*RASRYA
Trigger: AGCGTACCTGCTCGCCCTTCACTGAGGAGTTTGAGC...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR TCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCACTGGGGTCTTCAACATaGGCGCGTCAAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPLGSST*ARQTPP
Trigger: AGGAGGTGTTTGACGCGCTCATGTTGAAGACCCCAG...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGACTGGGGCTTGCCTTaGCACGCCAAAGTAAGATCG +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPDWGLP*HAKVRS
Trigger: CGATCTTACTTTGGCGTGTCAAGGCAAGCCCCAGTC...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356046.6
CDS-3UTR GCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTTGCTTGGCAGTGGGTTaGCGGGAATGCCAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVCLAVG*RECQCF
Trigger: GAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCA...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGAGTACCAGGCGCTCAGTaGCCAAGCCACAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRVPGAQ*PSHSHR
Trigger: CCTATGACTGTGGCTTGGGCACTGAGCGCCTGGTAC...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp GTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCCATTCGACATCTTCCTaGTCCCAAGCTCCGACGATC +
Preference number: 4 (lower is better)
Translates to: VYNSEWQGSSFTQRSLCSHSTSS*SQAPTI
Trigger: GATCGTCGGAGCTTGGGAGCAGGAAGATGTCGAATG...GGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361548.9
CDS-3UTR CCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACGGTTTTCAGGATATCTaGGAAGAGCATCGACTCCTG +
Preference number: 4 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYGFQDI*EEHRLL
Trigger: CAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACC...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGATCGCCTGACTTGATGTaGATGGCTTTGGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRSPDLM*MALGEP
Trigger: GGGCTCCCCCAAAGCCATCCACATCAAGTCAGGCGA...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGACTCCAGGTCAGTCTCTaGCCGAAGGTAGGTCGTCTC +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRLQVSL*PKVGRL
Trigger: GAGACGACCTACCTTCGGCCAGAGACTGACCTGGAG...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTGATGAACAGCACGGGTaGCGTCTCCAGGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVDEQHG*RLQVSL
Trigger: GAGACTGACCTGGAGACGCCACCCGTGCTGTTCATC...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTCAGCCCCTTCAGGTCTaGGGTCTTCAACATGAGCGC +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCQPLQV*GLQHER
Trigger: GCGCTCATGTTGAAGACCCCAGACCTGAAGGGGCTG...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp TTCCGCTCGTCATCGCGCATCTTCCTCTCAGCTCCCTTGTCACAGAAGATCTTGATATCCGCTTCTCCTTaGGACCAGAAAAATAGGAAG +
Preference number: 4 (lower is better)
Translates to: FRSSSRIFLSAPLSQKILISASP*DQKNRK
Trigger: CTTCCTATTTTTCTGGTCCCAAGGAGAAGCGGATAT...CAAGATCTTCTGTGACAAGGGAGCTGAGAGGAAGATGCGCGATGACGAGCGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR TCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACTGTGCTCCACAGTGTTaGAGTTTTCTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYCAPQC*SFLCSQ
Trigger: CTGACTGCAAAGAAAACTTCAACACTGTGGAGCACA...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGACATTCCTGCCCCCAGTaGTGGAGGACAATATCCGCT +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRHSCPQ*WRTISA
Trigger: AGCGGATATTGTCCTCCAGCACTGGGGGCAGGAATG...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATGTGAGGAAAAGTCTGTaGTCAGACAGTTTACGCCGA +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDVRKSL*SDSLRR
Trigger: TCGGCGTAAACTGTCTGAGCACAGACTTTTCCTCAC...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGACTCTCAGATGTGACCTaGCGTCGTCCTTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRLSDVT*RRPSTS
Trigger: AGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAG...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATGGTTTTCAGGATATCTaGGAAGAGCATCGACTCCTG +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDGFQDI*EEHRLL
Trigger: CAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACC...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGACTTCCTTGGCCTGCTTaGAGGGCAGAGGCTCAAACT +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRLPWPA*RAEAQT
Trigger: AGTTTGAGCCTCTGCCCTCCAAGCAGGCCAAGGAAG...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCTTCCTTGGCCTGCTTaGAGGGCAGAGGCTCAAACT +
Preference number: 4 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVLPWPA*RAEAQT
Trigger: AGTTTGAGCCTCTGCCCTCCAAGCAGGCCAAGGAAG...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACTCAGGTTATTCTTCTTaGGCAAATCTGGGTACTCTG +
Preference number: 4 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYSGYSS*ANLGTL
Trigger: CAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGA...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCATTCAAAGTCACTTTTaGGGCTGGGGTAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VYNSEWQGSSFTQRSLCSIQSHF*GWGSPL
Trigger: CAGAGGACTACCCCAGCCTCAAAAGTGACTTTGAAT...GGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCTCCTTAAGGATGATCTaGATTTTGCCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VYNSEWQGSSFTQRSLCSSLRMI*ILPSSS
Trigger: GGAGCTGGACGGCAAAATTCAGATCATCCTTAAGGA...GGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATATTTACATCCTGCGCTaGGGAAGTCTGAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDIYILR*GSLRKR
Trigger: TCTCTTTCTCAGACTTCCTCAGCGCAGGATGTAAAT...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGAGCACTGAGGCTCTGCTaGCCGCTTGTCTCTAATTCT +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRALRLC*PLVSNS
Trigger: AGAATTAGAGACAAGCGGTCAGCAGAGCCTCAGTGC...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGATTCCAGAAGCGCAGCTaGTCTACTGGGACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRFQKRS*STGTFS
Trigger: TGAGAAGGTCCCAGTAGAGCAGCTGCGCTTCTGGAA...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTTCCAGAAGCGCAGCTaGTCTACTGGGACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCFQKRS*STGTFS
Trigger: TGAGAAGGTCCCAGTAGAGCAGCTGCGCTTCTGGAA...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCACCACACAAAGGACAGTaGATTATAGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPPHKGQ*IIGHLL
Trigger: GAGGAGGTGGCCTATAATGCACTGTCCTTTGTGTGG...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCACAAATCTGGGTACTCTaGGGTTCCAGACACGTTCTC +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPQIWVL*GSRHVL
Trigger: GAGAACGTGTCTGGAACCCCAGAGTACCCAGATTTG...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGAGGGAACAGTCTTCTaGGTAGGTGGTAACCATGGT +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPEGTVF*VGGNHG
Trigger: ACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp GTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCTGTTGTTGTCCATGTTaGCTAAGATTCCTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: VYNSEWQGSSFTQRSLCSCCCPC*LRFLAC
Trigger: GCAAGCGAGGAATCTTAGTCAACATGGACAACAACA...GGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGACCCATGTTCCTCACTTaGGTCACAGGATGGGAACAT +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRPMFLT*VTGWEH
Trigger: ATGTTCCCATCCTGTGACTCAAGTGAGGAACATGGG...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGCCACCTCCTCAATGTaGTCCACAGTGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPATSSM*STVLKF
Trigger: AAACTTCAACACTGTGGAGCACATTGAGGAGGTGGC...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTCCACACAAAGGACAGTaGATTATAGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCPHKGQ*IIGHLL
Trigger: GAGGAGGTGGCCTATAATGCACTGTCCTTTGTGTGG...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTGAGCATCGACTCCTGTaGGTCATCTTTGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCEHRLL*VIFEGA
Trigger: AGCACCTTCAAAGATGACCCACAGGAGTCGATGCTC...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTCAGAAGATCTTGATCTaGCAGACAGCACGGTGTACC +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCQKILI*QTARCT
Trigger: GGTACACCGTGCTGTCTGCCAGATCAAGATCTTCTG...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGAGCCACCTCCTCAATGTaGTCCACAGTGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRATSSM*STVLKF
Trigger: AAACTTCAACACTGTGGAGCACATTGAGGAGGTGGC...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR GCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTGCCACCTCCTCAATGTaGTCCACAGTGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCATSSM*STVLKF
Trigger: AAACTTCAACACTGTGGAGCACATTGAGGAGGTGGC...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTGTGAGGAAAAGTCTGTaGTCAGACAGTTTACGCCGA +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCVRKSL*SDSLRR
Trigger: TCGGCGTAAACTGTCTGAGCACAGACTTTTCCTCAC...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGACTTCTTGAGCAAATCTaGGTACTCTGGGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRLLEQI*VLWGSR
Trigger: TCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAG...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCACATACATATCAGTGGTaGGTAACAGGTAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPHTYQW*VTGSCP
Trigger: TGGACAGCTACCTGTTACCCACCACTGATATGTATG...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
3UTR CAA 72 bp GTTTTCAAGTTAACTGACCAAAGGTTGAGAAATCCTTaGTCTGAAGTTGAAGGAAGACAGAGAGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: VFKLTDQRLRNP*SEVEGRQRVGA
Trigger: GGCCCCCACTCTCTGTCTTCCTTCAACTTCAGACAAAGGATTTCTCAACCTTTGGTCAGTTAACTTGAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR TCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCATCAGGTTATTCTTCTTaGGCAAATCTGGGTACTCTG +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPSGYSS*ANLGTL
Trigger: CAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGA...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGACATACATATCAGTGGTaGGTAACAGGTAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRHTYQW*VTGSCP
Trigger: TGGACAGCTACCTGTTACCCACCACTGATATGTATG...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTATACAACAGTGAGTaGCAAGGCAGTAGTTTTACA +
Preference number: 4 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPVYNSE*QGSSFT
Trigger: TGTAAAACTACTGCCTTGCCACTCACTGTTGTATAC...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGAAAGTTTCCCCTCGCTTaGATTTCTTGTAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRKFPLA*ISCRLC
Trigger: ACAAAGTCTACAAGAAATGCAAGCGAGGGGAAACTT...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGATATCATACATATCAGTaGTGGGTAACAGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: KCKVIARMYSGATYSELRYHTYQ*WVTGSC
Trigger: ACAGCTACCTGTTACCCACCACTGATATGTATGATA...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTATCATACATATCAGTaGTGGGTAACAGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCYHTYQ*WVTGSC
Trigger: ACAGCTACCTGTTACCCACCACTGATATGTATGATA...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTCTAAGATTCCTCGCTTaGATTTCTTGTAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCLRFLA*ISCRLC
Trigger: ACAAAGTCTACAAGAAATGCAAGCGAGGAATCTTAG...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR GCA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCTAAGATTCCTCGCTTaGATTTCTTGTAGACTTTGT +
Preference number: 4 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVLRFLA*ISCRLC
Trigger: ACAAAGTCTACAAGAAATGCAAGCGAGGAATCTTAG...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp GAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGACAAGGCAAGGCCTTaGCCACCTGCTGGGGTCCGC +
Preference number: 5 (lower is better)
Translates to: EVVCGVGPRPCWPLAGREDKARP*PPAGVR
Trigger: GCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGTC...CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCACGCCGATGAACACCTaGGCCTCTTCATTCACGTTC +
Preference number: 5 (lower is better)
Translates to: GAAPAGVVLREGACAATITPMNT*ASSFTF
Trigger: GAACGTGAATGAAGAGGCCAAGGTGTTCATCGGCGT...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS GCA 90 bp CCCAGCCCTGGCCTCACCCCTCCAGAGCGCTGCAGGCTGGAGAAGTaGACATTGGGGATGAACAGCACGGGTGGCGTCTCCAGGTCAGTC +
Preference number: 5 (lower is better)
Translates to: PSPGLTPPERCRLEK*TLGMNSTGGVSRSV
Trigger: GACTGACCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCAGCGCTCTGGAGGGGTGAGGCCAGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461318.1
CDS-3UTR CAA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCACCACACTCTTGACTTaGTTGGAGGACAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: GAAPAGVVLREGACAATITTLLT*LEDKAR
Trigger: CCTTGCCTTGTCCTCCAACAAAGTCAAGAGTGTGGT...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATTGGGTGTCGAGATTTaGCTGACAGGTAGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPLGVEI*LTGRFP
Trigger: TGGGAACCTACCTGTCAGCAAAATCTCGACACCCAA...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361548.9
CDS-3UTR CAA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCCTGGAGTCAGGGCACTaGACCTTCCTCCGGAACTGC +
Preference number: 5 (lower is better)
Translates to: EGACAATILTGSLQEHHCLESGH*TFLRNC
Trigger: GCAGTTCCGGAGGAAGGTCAAGTGCCCTGACTCCAG...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGGTCCCTGCTGGCCCCTaGCAGGTCGTGAGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKVPAGP*QVVRVW
Trigger: CCAAACCCTCACGACCTGCAAGGGGCCAGCAGGGAC...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS CCA 90 bp GAGGCATGTGGAGAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTaGCCCCTTGCAGGTCGTGAGGGTTTGGATGCTCGAGAGGCCTTA +
Preference number: 5 (lower is better)
Translates to: EACGEVVCGVGPRPC*PLAGREGLDAREAL
Trigger: TAAGGCCTCTCGAGCATCCAAACCCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTCTCCACATGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp TGGGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCAGAGAATTTCTGCAAGTaGACTGGGTCGTTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: WGPHQLAWCCGRERVPPPENFCK*TGSFFS
Trigger: GCTAAAGAACGACCCAGTCAACTTGCAGAAATTCTC...TGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCGTGTTGAAGTTTTCTTaGCAGTCAGCCACGTCAATG +
Preference number: 5 (lower is better)
Translates to: GAAPAGVVLREGACAATIVLKFS*QSATSM
Trigger: CATTGACGTGGCTGACTGCAAAGAAAACTTCAACAC...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGGACAGCAGGCAGCCCTaGACGCCACTGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKDSRQP*TPLLLE
Trigger: CTCCAGCAACAGTGGCGTCAAGGGCTGCCTGCTGTC...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS TCA 90 bp TCACCCCTCCAGAGCGCTGCAGGCTGGAGAAGTGCACATTGGGGATaGACAGCACGGGTGGCGTCTCCAGGTCAGTCTCTGGCCGAAGGT +
Preference number: 5 (lower is better)
Translates to: SPLQSAAGWRSAHWG*TARVASPGQSLAEG
Trigger: ACCTTCGGCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCAGCGCTCTGGAGGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461318.1
CDS-3UTR CAA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCTCCTGTGGGTCATCTTaGAAGGTGCTGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: EGACAATILTGSLQEHHCSCGSS*KVLSGC
Trigger: GCAGCCAGACAGCACCTTCAAAGATGACCCACAGGA...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGTCAATGACCCGCTGCTaGGCAGTGGGTTGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKSMTRC*AVGCRE
Trigger: TTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGA...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp GATGAACAGCACGGGTGGCGTCTCCAGGTCAGTCTCTGGCCGAAGGTAGGTCGTGACAGCAGGCAGCCCTaGACGCCACTGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: DEQHGWRLQVSLWPKVGRDSRQP*TPLLLE
Trigger: CTCCAGCAACAGTGGCGTCAAGGGCTGCCTGCTGTC...ACGACCTACCTTCGGCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTGTGAAGTGCAGGCTGTaGACGGTGGTGGGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCVKCRL*TVVGLG
Trigger: TCCCAGCCCCACCACCGTCAACAGCCTGCACTTCAC...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp GGGTTCCGGGGAGGTTTTCAGGATATCTGGGAAGAGCATCGACTCCTGTGGGTCGACAAGGCAAGGCCTTaGCCACCTGCTGGGGTCCGC +
Preference number: 5 (lower is better)
Translates to: GFRGGFQDIWEEHRLLWVDKARP*PPAGVR
Trigger: GCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGTC...GACCCACAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACCTCCCCGGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp GAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGACACTCTTGACTTTGTaGGAGGACAAGGCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: EVVCGVGPRPCWPLAGRETLLTL*EDKARP
Trigger: AGGCCTTGCCTTGTCCTCCAACAAAGTCAAGAGTGT...CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp GAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTTCAATGACCCGCTGCTaGGCAGTGGGTTGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: ELSDVTCRRPSTSPPGGCSMTRC*AVGCRE
Trigger: TTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGA...ACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGCCCTTGACGCCACTGTaGCTGGAGTCAGGGCACTTG +
Preference number: 5 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRPLTPL*LESGHL
Trigger: CAAGTGCCCTGACTCCAGCAACAGTGGCGTCAAGGG...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp GGGGCCGCACCAGCTGGCGTGGTGCTGCGGGAGGGAGCGTGTGCCGCCACCATCAGGTTGAGAAATCCTTaGTCTGAAGTTGAAGGAAGA +
Preference number: 5 (lower is better)
Translates to: GAAPAGVVLREGACAATIRLRNP*SEVEGR
Trigger: TCTTCCTTCAACTTCAGACAAAGGATTTCTCAACCT...GATGGTGGCGGCACACGCTCCCTCCCGCAGCACCACGCCAGCTGGTGCGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS GCA 90 bp ACACCCACGTCAATGACCCGCTGCTTGGCAGTGGGTTGCCGGGAATaGCAGTGCTTCCAGAAGCGCAGCTGCTCTACTGGGACCTTCTCA +
Preference number: 5 (lower is better)
Translates to: TPTSMTRCLAVGCRE*QCFQKRSCSTGTFS
Trigger: TGAGAAGGTCCCAGTAGAGCAGCTGCGCTTCTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGTGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528181.1
CDS-3UTR CAA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGGTGACTCGCCTGACTaGATGTGGATGGCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWGDSPD*MWMALG
Trigger: CCCCAAAGCCATCCACATCAAGTCAGGCGAGTCACC...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCACACTCTTGACTTTGTaGGAGGACAAGGCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: EGACAATILTGSLQEHHCTLLTL*EDKARP
Trigger: AGGCCTTGCCTTGTCCTCCAACAAAGTCAAGAGTGT...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp GAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGACCATCACCACACTCTaGACTTTGTTGGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: EVVCGVGPRPCWPLAGRETITTL*TLLEDK
Trigger: CTTGTCCTCCAACAAAGTCAAGAGTGTGGTGATGGT...CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGTCAATGACCCGCTGCTaGGCAGTGGGTTGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWSMTRC*AVGCRE
Trigger: TTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGA...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp CTTGACCTTCCTCCGGAACTGCTTCCGCTCGTCATCGCGCATCTTCCTCTCAGCTCAATGACCCGCTGCTaGGCAGTGGGTTGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: LDLPPELLPLVIAHLPLSSMTRC*AVGCRE
Trigger: TTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGA...GCTGAGAGGAAGATGCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp GCTGGAGAAGTGCACATTGGGGATGAACAGCACGGGTGGCGTCTCCAGGTCAGTCTGGAGTCAGGGCACTaGACCTTCCTCCGGAACTGC +
Preference number: 5 (lower is better)
Translates to: AGEVHIGDEQHGWRLQVSLESGH*TFLRNC
Trigger: GCAGTTCCGGAGGAAGGTCAAGTGCCCTGACTCCAG...ACTGACCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGTCCTGTGGGTCATCTTaGAAGGTGCTGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWSCGSS*KVLSGC
Trigger: GCAGCCAGACAGCACCTTCAAAGATGACCCACAGGA...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGTTGATGTGGATGGCTTaGGGGGAGCCCAGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWLMWMA*GEPRVY
Trigger: ATACACCCTGGGCTCCCCCAAAGCCATCCACATCAA...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp GGGAACCCATACTTCTCAGAGATCGCATTCCTCAGCCCCTTCAGGTCTGGGGTCCCCTTGACGCCACTGTaGCTGGAGTCAGGGCACTTG +
Preference number: 5 (lower is better)
Translates to: GNPYFSEIAFLSPFRSGVPLTPL*LESGHL
Trigger: CAAGTGCCCTGACTCCAGCAACAGTGGCGTCAAGGG...GACCCCAGACCTGAAGGGGCTGAGGAATGCGATCTCTGAGAAGTATGGGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp GAGGGAGCGTGTGCCGCCACCATCTTAACGGGCAGCCTGCAGGAGCACCACTGCTACACAGCGGTCACTTaGTTCCAGTCGATCGTTAGT +
Preference number: 5 (lower is better)
Translates to: EGACAATILTGSLQEHHCYTAVT*FQSIVS
Trigger: ACTAACGATCGACTGGAACAAAGTGACCGCTGTGTA...GCAGTGGTGCTCCTGCAGGCTGCCCGTTAAGATGGTGGCGGCACACGCTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp TTGATCTGGCAGACAGCACGGTGTACCAGGCGCTCAGTGCCCAAGCCACAGTCATTGATGTGGATGGCTTaGGGGGAGCCCAGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: LIWQTARCTRRSVPKPQSLMWMA*GEPRVY
Trigger: ATACACCCTGGGCTCCCCCAAAGCCATCCACATCAA...TGACTGTGGCTTGGGCACTGAGCGCCTGGTACACCGTGCTGTCTGCCAGATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp GGGTTCCGGGGAGGTTTTCAGGATATCTGGGAAGAGCATCGACTCCTGTGGGTCGGTGACTCGCCTGACTaGATGTGGATGGCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: GFRGGFQDIWEEHRLLWVGDSPD*MWMALG
Trigger: CCCCAAAGCCATCCACATCAAGTCAGGCGAGTCACC...GACCCACAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACCTCCCCGGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGACCACACTCTTGACTTaGTTGGAGGACAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKTTLLT*LEDKAR
Trigger: CCTTGCCTTGTCCTCCAACAAAGTCAAGAGTGTGGT...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGACGCCGATGAACACCTaGGCCTCTTCATTCACGTTC +
Preference number: 5 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVTPMNT*ASSFTF
Trigger: GAACGTGAATGAAGAGGCCAAGGTGTTCATCGGCGT...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp GAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGATGTTGTTGTCCATGTaGACTAAGATTCCTCGCTTG +
Preference number: 5 (lower is better)
Translates to: EVVCGVGPRPCWPLAGREMLLSM*TKIPRL
Trigger: CAAGCGAGGAATCTTAGTCAACATGGACAACAACAT...CTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGCATGGTGACATTGTTTaGGGGTACGGGGAGGCACTG +
Preference number: 5 (lower is better)
Translates to: CRSTTADKGLGRREQSSGHGDIV*GYGEAL
Trigger: CAGTGCCTCCCCGTACCCCAAAACAATGTCACCATG...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS CCA 90 bp GCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTaGGTGTGTCATTCCGAGTTTACAGTGAAGTGCAGGCTGTTGACG +
Preference number: 5 (lower is better)
Translates to: ALRCDLPSSFHLSSR*VCHSEFTVKCRLLT
Trigger: CGTCAACAGCCTGCACTTCACTGTAAACTCGGAATGACACACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp GCCTCTTCCCTCAGGGAAGGCATTCAAGTAACAGCGCTGAGGCATGTGGAGAGGTTGATGTGGATGGCTTaGGGGGAGCCCAGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: ASSLREGIQVTALRHVERLMWMA*GEPRVY
Trigger: ATACACCCTGGGCTCCCCCAAAGCCATCCACATCAA...CCTCTCCACATGCCTCAGCGCTGTTACTTGAATGCCTTCCCTGAGGGAAGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGACACTCTTGACTTTGTaGGAGGACAAGGCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVTLLTL*EDKARP
Trigger: AGGCCTTGCCTTGTCCTCCAACAAAGTCAAGAGTGT...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGACGCCGATGAACACCTaGGCCTCTTCATTCACGTTC +
Preference number: 5 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWTPMNT*ASSFTF
Trigger: GAACGTGAATGAAGAGGCCAAGGTGTTCATCGGCGT...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp CTGAAGGTCGCCTTCCTTGGCCTGCTTGGAGGGCAGAGGCTCAAACTCCTCAGTACGCCGATGAACACCTaGGCCTCTTCATTCACGTTC +
Preference number: 5 (lower is better)
Translates to: LKVAFLGLLGGQRLKLLSTPMNT*ASSFTF
Trigger: GAACGTGAATGAAGAGGCCAAGGTGTTCATCGGCGT...ACTGAGGAGTTTGAGCCTCTGCCCTCCAAGCAGGCCAAGGAAGGCGACCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGACCCATGTTCCTCACTaGAGTCACAGGATGGGAACA +
Preference number: 5 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRTHVPH*SHRMGT
Trigger: TGTTCCCATCCTGTGACTCAAGTGAGGAACATGGGT...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS TCA 90 bp AGGGTTTGGATGCTCGAGAGGCCTTACAGCTCCTTAAGGATGATCTaGATTTTGCCGTCCAGCTCCCCCATGTCCAGCAGGAAGGCGACG +
Preference number: 5 (lower is better)
Translates to: RVWMLERPYSSLRMI*ILPSSSPMSSRKAT
Trigger: CGTCGCCTTCCTGCTGGACATGGGGGAGCTGGACGGCAAAATTCAGATCATCCTTAAGGAGCTGTAAGGCCTCTCGAGCATCCAAACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS GCA 90 bp CACGCCAAAGTAAGATCGTCAGCCCATTCATTTACCCTTACAAATTaGTCTGTGAATCCCGGTGCCGGCCTCCCCGCTCTTCCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: HAKVRSSAHSFTLTN*SVNPGAGLPALPPP
Trigger: TGGAGGGGGAAGAGCGGGGAGGCCGGCACCGGGATTCACAGAGCAATTTGTAAGGGTAAATGAATGGGCTGACGATCTTACTTTGGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356046.6
CDS-3UTR CAA 90 bp CTTGACCTTCCTCCGGAACTGCTTCCGCTCGTCATCGCGCATCTTCCTCTCAGCACACTCTTGACTTTGTaGGAGGACAAGGCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: LDLPPELLPLVIAHLPLSTLLTL*EDKARP
Trigger: AGGCCTTGCCTTGTCCTCCAACAAAGTCAAGAGTGT...GCTGAGAGGAAGATGCGCGATGACGAGCGGAAGCAGTTCCGGAGGAAGGTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp CCTGGCCCTGACGTCTGTGGGTCTGTGACTCAAGGGCCTCTTCCCTCAGGGAAGGTGTTGAAGTTTTCTTaGCAGTCAGCCACGTCAATG +
Preference number: 5 (lower is better)
Translates to: PGPDVCGSVTQGPLPSGKVLKFS*QSATSM
Trigger: CATTGACGTGGCTGACTGCAAAGAAAACTTCAACAC...CTTCCCTGAGGGAAGAGGCCCTTGAGTCACAGACCCACAGACGTCAGGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS TCA 90 bp CATCTTCCTGCTCCCAAGCTCCGACGATCAGCACTGAGGCTCTGCTaGCCGCTTGTCTCTAATTCTTGCCTGACACAGACATTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: HLPAPKLRRSALRLC*PLVSNSCLTQTFSA
Trigger: GGCAGAGAATGTCTGTGTCAGGCAAGAATTAGAGACAAGCGGTCAGCAGAGCCTCAGTGCTGATCGTCGGAGCTTGGGAGCAGGAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350501.9
ENST00000361548.9
ENST00000530984.1
CDS-3UTR CAA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGAGAATTTCTGCAAGTaGACTGGGTCGTTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWENFCK*TGSFFS
Trigger: GCTAAAGAACGACCCAGTCAACTTGCAGAAATTCTC...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp AGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGCTCTCAAACAAGGAGTaGAGGGAGCCATTATCATAC +
Preference number: 5 (lower is better)
Translates to: RALRCDLPSSFHLSSRWVLSNKE*REPLSY
Trigger: GTATGATAATGGCTCCCTCAACTCCTTGTTTGAGAG...CACCCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp CTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGGGTGTTGAAGTTTTCTTaGCAGTCAGCCACGTCAATG +
Preference number: 5 (lower is better)
Translates to: LRALRCDLPSSFHLSSRWVLKFS*QSATSM
Trigger: CATTGACGTGGCTGACTGCAAAGAAAACTTCAACAC...CCACCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTTCCTCTCAGCTCCCTaGTCACAGAAGATCTTGATC +
Preference number: 5 (lower is better)
Translates to: CRSTTADKGLGRREQSSGFLSAP*SQKILI
Trigger: GATCAAGATCTTCTGTGACAAGGGAGCTGAGAGGAA...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp GAGCTGAGAGCTCTCAGATGTGACCTGCCGTCGTCCTTCCACCTCTCCTCCAGGTGCCCGGGAAAGTGTTaGATTTATGTTGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: ELRALRCDLPSSFHLSSRCPGKC*IYVEVW
Trigger: CCAAACCTCAACATAAATCAAACACTTTCCCGGGCA...CCTGGAGGAGAGGTGGAAGGACGACGGCAGGTCACATCTGAGAGCTCTCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGCTCTCAAACAAGGAGTaGAGGGAGCCATTATCATAC +
Preference number: 5 (lower is better)
Translates to: CRSTTADKGLGRREQSSGLSNKE*REPLSY
Trigger: GTATGATAATGGCTCCCTCAACTCCTTGTTTGAGAG...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp GGGTTCCGGGGAGGTTTTCAGGATATCTGGGAAGAGCATCGACTCCTGTGGGTCACCATCACCACACTCTaGACTTTGTTGGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: GFRGGFQDIWEEHRLLWVTITTL*TLLEDK
Trigger: CTTGTCCTCCAACAAAGTCAAGAGTGTGGTGATGGT...GACCCACAGGAGTCGATGCTCTTCCCAGATATCCTGAAAACCTCCCCGGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATCCCTTGACGCCACTGTaGCTGGAGTCAGGGCACTTG +
Preference number: 5 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDPLTPL*LESGHL
Trigger: CAAGTGCCCTGACTCCAGCAACAGTGGCGTCAAGGG...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp GATGAACAGCACGGGTGGCGTCTCCAGGTCAGTCTCTGGCCGAAGGTAGGTCGTATGTTGTTGTCCATGTaGACTAAGATTCCTCGCTTG +
Preference number: 5 (lower is better)
Translates to: DEQHGWRLQVSLWPKVGRMLLSM*TKIPRL
Trigger: CAAGCGAGGAATCTTAGTCAACATGGACAACAACAT...ACGACCTACCTTCGGCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp TGCAGGAGCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTGCCCGGGAAAGTGTTaGATTTATGTTGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: CRSTTADKGLGRREQSSGCPGKC*IYVEVW
Trigger: CCAAACCTCAACATAAATCAAACACTTTCCCGGGCA...CCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGCTCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361548.9
CDS GCA 90 bp CCATGCCATGGTAGTACCTCTTTCCTTGGTCATTCCTGCCCCCAGTaGTGGAGGACAATATCCGCTTCTCCTTGGGACCCATGTAGTAAT +
Preference number: 5 (lower is better)
Translates to: PCHGSTSFLGHSCPQ*WRTISASPWDPCSN
Trigger: ATTACTACATGGGTCCCAAGGAGAAGCGGATATTGTCCTCCAGCACTGGGGGCAGGAATGACCAAGGAAAGAGGTACTACCATGGCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000236255.4
ENST00000350501.9
ENST00000356046.6
ENST00000361548.9
ENST00000524724.5
CDS GCA 90 bp CCATGCCATGGTAGTACCTCTTTCCTTGGTCATTCCTGCCCCCAGTaGTGGAGGACAATATCCGCTTCTCCTTGGGACCAGAAAAATAGG +
Preference number: 5 (lower is better)
Translates to: PCHGSTSFLGHSCPQ*WRTISASPWDQKNR
Trigger: CCTATTTTTCTGGTCCCAAGGAGAAGCGGATATTGTCCTCCAGCACTGGGGGCAGGAATGACCAAGGAAAGAGGTACTACCATGGCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATGGTGACTCGCCTGACTaGATGTGGATGGCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDGDSPD*MWMALG
Trigger: CCCCAAAGCCATCCACATCAAGTCAGGCGAGTCACC...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGAGACAAGGCAAGGCCTTaGCCACCTGCTGGGGTCCGC +
Preference number: 5 (lower is better)
Translates to: KCKVIARMYSGATYSELRDKARP*PPAGVR
Trigger: GCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGTC...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTGACAAGGCAAGGCCTTaGCCACCTGCTGGGGTCCGC +
Preference number: 5 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVDKARP*PPAGVR
Trigger: GCGGACCCCAGCAGGTGGCAAAGGCCTTGCCTTGTC...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp GCACCACTGCAGACAAGGGTCTTGGGAGGAGGGAACAGTCTTCTGGGTAGGTGGATCAGGTTATTCTTCTaGAGCAAATCTGGGTACTCT +
Preference number: 5 (lower is better)
Translates to: APLQTRVLGGGNSLLGRWIRLFF*SKSGYS
Trigger: AGAGTACCCAGATTTGCTCAAGAAGAATAACCTGAT...CCACCTACCCAGAAGACTGTTCCCTCCTCCCAAGACCCTTGTCTGCAGTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATTCCTGTGGGTCATCTTaGAAGGTGCTGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDSCGSS*KVLSGC
Trigger: GCAGCCAGACAGCACCTTCAAAGATGACCCACAGGA...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp TTCCGCTCGTCATCGCGCATCTTCCTCTCAGCTCCCTTGTCACAGAAGATCTTGTTCCTCTCAGCTCCCTaGTCACAGAAGATCTTGATC +
Preference number: 5 (lower is better)
Translates to: FRSSSRIFLSAPLSQKILFLSAP*SQKILI
Trigger: GATCAAGATCTTCTGTGACAAGGGAGCTGAGAGGAA...CAAGATCTTCTGTGACAAGGGAGCTGAGAGGAAGATGCGCGATGACGAGCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCACCCTTGACGCCACTGTaGCTGGAGTCAGGGCACTTG +
Preference number: 5 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPPLTPL*LESGHL
Trigger: CAAGTGCCCTGACTCCAGCAACAGTGGCGTCAAGGG...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGAGACAGCAGGCAGCCCTaGACGCCACTGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KCKVIARMYSGATYSELRDSRQP*TPLLLE
Trigger: CTCCAGCAACAGTGGCGTCAAGGGCTGCCTGCTGTC...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp GAGGGAACAGTCTTCTGGGTAGGTGGTAACCATGGTGACATTGTTTTGGGGTACAGACTGGGGCTTGCCTaGACACGCCAAAGTAAGATC +
Preference number: 5 (lower is better)
Translates to: EGTVFWVGGNHGDIVLGYRLGLA*TRQSKI
Trigger: GATCTTACTTTGGCGTGTCAAGGCAAGCCCCAGTCT...GTACCCCAAAACAATGTCACCATGGTTACCACCTACCCAGAAGACTGTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356046.6
CDS-3UTR CAA 90 bp TTCCGCTCGTCATCGCGCATCTTCCTCTCAGCTCCCTTGTCACAGAAGATCTTGCTCTCAAACAAGGAGTaGAGGGAGCCATTATCATAC +
Preference number: 5 (lower is better)
Translates to: FRSSSRIFLSAPLSQKILLSNKE*REPLSY
Trigger: GTATGATAATGGCTCCCTCAACTCCTTGTTTGAGAG...CAAGATCTTCTGTGACAAGGGAGCTGAGAGGAAGATGCGCGATGACGAGCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp ATCAGGTTATTCTTCTTGAGCAAATCTGGGTACTCTGGGGTTCCAGACACGTTCTCCTGTGGGTCATCTTaGAAGGTGCTGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: IRLFFLSKSGYSGVPDTFSCGSS*KVLSGC
Trigger: GCAGCCAGACAGCACCTTCAAAGATGACCCACAGGA...GAACGTGTCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGGTGACTCGCCTGACTaGATGTGGATGGCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPGDSPD*MWMALG
Trigger: CCCCAAAGCCATCCACATCAAGTCAGGCGAGTCACC...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGACTGGAGTCAGGGCACTaGACCTTCCTCCGGAACTGC +
Preference number: 5 (lower is better)
Translates to: KCKVIARMYSGATYSELRLESGH*TFLRNC
Trigger: GCAGTTCCGGAGGAAGGTCAAGTGCCCTGACTCCAG...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp AATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTCTGGAGTCAGGGCACTaGACCTTCCTCCGGAACTGC +
Preference number: 5 (lower is better)
Translates to: NVYNSEWQGSSFTQRSLCLESGH*TFLRNC
Trigger: GCAGTTCCGGAGGAAGGTCAAGTGCCCTGACTCCAG...ACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS CCA 90 bp CAAGGCCCCCTCCAAGCTCATCAGGTTATTCTTCTTGAGCAAATCTaGGTACTCTGGGGTTCCAGACACGTTCTCTGTCAGGAATTTCAT +
Preference number: 5 (lower is better)
Translates to: QGPLQAHQVILLEQI*VLWGSRHVLCQEFH
Trigger: ATGAAATTCCTGACAGAGAACGTGTCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGATGAGCTTGGAGGGGGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000236255.4
ENST00000350501.9
ENST00000356046.6
ENST00000361548.9
ENST00000528064.5
ENST00000530984.1
CDS-3UTR CAA 90 bp TCTCTTCAGGGAACCCATACTTCTCAGAGATCGCATTCCTCAGCCCCTTCAGGTGTGTTGAAGTTTTCTTaGCAGTCAGCCACGTCAATG +
Preference number: 5 (lower is better)
Translates to: SLQGTHTSQRSHSSAPSGVLKFS*QSATSM
Trigger: CATTGACGTGGCTGACTGCAAAGAAAACTTCAACAC...ACCTGAAGGGGCTGAGGAATGCGATCTCTGAGAAGTATGGGTTCCCTGAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTGCAGGTCGTGAGGGTTaGGATGCTCGAGAGGCCTTA +
Preference number: 5 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVAGREG*DAREAL
Trigger: TAAGGCCTCTCGAGCATCCAAACCCTCACGACCTGC...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS CCA 90 bp GGTCATTCCTGCCCCCAGTGCTGGAGGACAATATCCGCTTCTCCTTaGGACCAGAAAAATAGGAAGAATGGAATTCATCCACATTCTTCT +
Preference number: 5 (lower is better)
Translates to: GHSCPQCWRTISASP*DQKNRKNGIHPHSS
Trigger: AGAAGAATGTGGATGAATTCCATTCTTCCTATTTTTCTGGTCCCAAGGAGAAGCGGATATTGTCCTCCAGCACTGGGGGCAGGAATGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS-3UTR CAA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTTTGATGTGGATGGCTTaGGGGGAGCCCAGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVLMWMA*GEPRVY
Trigger: ATACACCCTGGGCTCCCCCAAAGCCATCCACATCAA...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp ATCAGGTTATTCTTCTTGAGCAAATCTGGGTACTCTGGGGTTCCAGACACGTTCACCACACTCTTGACTTaGTTGGAGGACAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: IRLFFLSKSGYSGVPDTFTTLLT*LEDKAR
Trigger: CCTTGCCTTGTCCTCCAACAAAGTCAAGAGTGTGGT...GAACGTGTCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS CCA 90 bp CTCCAAGCTCATCAGGTTATTCTTCTTGAGCAAATCTGGGTACTCTaGGGTTCCAGACACGTTCTCTGTCAGGAATTTCATGAGGTGTGT +
Preference number: 5 (lower is better)
Translates to: LQAHQVILLEQIWVL*GSRHVLCQEFHEVC
Trigger: ACACACCTCATGAAATTCCTGACAGAGAACGTGTCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGATGAGCTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000236255.4
ENST00000350501.9
ENST00000356046.6
ENST00000361548.9
ENST00000528064.5
ENST00000530984.1
CDS-3UTR CAA 90 bp ACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAGTCGATCTCTCAAACAAGGAGTaGAGGGAGCCATTATCATAC +
Preference number: 5 (lower is better)
Translates to: TVSGKAVVLHSGHFVPVDLSNKE*REPLSY
Trigger: GTATGATAATGGCTCCCTCAACTCCTTGTTTGAGAG...ATCGACTGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGAACCACACTCTTGACTTaGTTGGAGGACAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: KCKVIARMYSGATYSELRTTLLT*LEDKAR
Trigger: CCTTGCCTTGTCCTCCAACAAAGTCAAGAGTGTGGT...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAACCATCACCACACTCTaGACTTTGTTGGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPTITTL*TLLEDK
Trigger: CTTGTCCTCCAACAAAGTCAAGAGTGTGGTGATGGT...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGAACCATCACCACACTCTaGACTTTGTTGGAGGACAAG +
Preference number: 5 (lower is better)
Translates to: KCKVIARMYSGATYSELRTITTL*TLLEDK
Trigger: CTTGTCCTCCAACAAAGTCAAGAGTGTGGTGATGGT...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGATTCCTCTCAGCTCCCTaGTCACAGAAGATCTTGATC +
Preference number: 5 (lower is better)
Translates to: KCKVIARMYSGATYSELRFLSAP*SQKILI
Trigger: GATCAAGATCTTCTGTGACAAGGGAGCTGAGAGGAA...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS-3UTR CAA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTTTCCTCTCAGCTCCCTaGTCACAGAAGATCTTGATC +
Preference number: 5 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVFLSAP*SQKILI
Trigger: GATCAAGATCTTCTGTGACAAGGGAGCTGAGAGGAA...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTTACACAGCGGTCACTTaGTTCCAGTCGATCGTTAGT +
Preference number: 5 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVYTAVT*FQSIVS
Trigger: ACTAACGATCGACTGGAACAAAGTGACCGCTGTGTA...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTGAGAATTTCTGCAAGTaGACTGGGTCGTTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVENFCK*TGSFFS
Trigger: GCTAAAGAACGACCCAGTCAACTTGCAGAAATTCTC...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp ATGTATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTATGTTGTTGTCCATGTaGACTAAGATTCCTCGCTTG +
Preference number: 5 (lower is better)
Translates to: MYTTVSGKAVVLHSGHFVMLLSM*TKIPRL
Trigger: CAAGCGAGGAATCTTAGTCAACATGGACAACAACAT...AACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp TATACAACAGTGAGTGGCAAGGCAGTAGTTTTACACAGCGGTCACTTTGTTCCAAGGTTGAGAAATCCTTaGTCTGAAGTTGAAGGAAGA +
Preference number: 5 (lower is better)
Translates to: YTTVSGKAVVLHSGHFVPRLRNP*SEVEGR
Trigger: TCTTCCTTCAACTTCAGACAAAGGATTTCTCAACCT...TGGAACAAAGTGACCGCTGTGTAAAACTACTGCCTTGCCACTCACTGTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS-3UTR CAA 90 bp AAATGCAAAGTAATAGCCAGAATGTATTCAGGGGCCACATACTCTGAGCTGAGAATCAGGTTATTCTTCTaGAGCAAATCTGGGTACTCT +
Preference number: 5 (lower is better)
Translates to: KCKVIARMYSGATYSELRIRLFF*SKSGYS
Trigger: AGAGTACCCAGATTTGCTCAAGAAGAATAACCTGAT...TCTCAGCTCAGAGTATGTGGCCCCTGAATACATTCTGGCTATTACTTTGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350501.9
CDS GCA 72 bp GGCCTCACCCCTCCAGAGCGCTGCAGGCTGGAGAAGTaGACATTGGGGATGAACAGCACGGGTGGCGTCTCC +
Preference number: 6 (lower is better)
Translates to: GLTPPERCRLEK*TLGMNSTGGVS
Trigger: GGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCAGCGCTCTGGAGGGGTGAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461318.1
CDS CAA 72 bp TTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTaGCAGGTCGTGAGGGTTTGGATGCTCGAGAGGCCT +
Preference number: 6 (lower is better)
Translates to: LCVAWGHVPAGP*QVVRVWMLERP
Trigger: AGGCCTCTCGAGCATCCAAACCCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS CAA 90 bp GTGGAGAGGTTGTGTGTGGCGTGGGGCCACGTCCCTGCTGGCCCCTaGCAGGTCGTGAGGGTTTGGATGCTCGAGAGGCCTTACAGCTCC +
Preference number: 6 (lower is better)
Translates to: VERLCVAWGHVPAGP*QVVRVWMLERPYSS
Trigger: GGAGCTGTAAGGCCTCTCGAGCATCCAAACCCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCCACACACAACCTCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS CAA 90 bp CCTGGCCTCACCCCTCCAGAGCGCTGCAGGCTGGAGAAGTGCACATaGGGGATGAACAGCACGGGTGGCGTCTCCAGGTCAGTCTCTGGC +
Preference number: 6 (lower is better)
Translates to: PGLTPPERCRLEKCT*GMNSTGGVSRSVSG
Trigger: GCCAGAGACTGACCTGGAGACGCCACCCGTGCTGTTCATCCCCAATGTGCACTTCTCCAGCCTGCAGCGCTCTGGAGGGGTGAGGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461318.1
CDS CAA 90 bp ACGCCGATGAACACCCACGTCAATGACCCGCTGCTTGGCAGTGGGTaGCCGGGAATGCCAGTGCTTCCAGAAGCGCAGCTGCTCTACTGG +
Preference number: 6 (lower is better)
Translates to: TPMNTHVNDPLLGSG*PGMPVLPEAQLLYW
Trigger: CCAGTAGAGCAGCTGCGCTTCTGGAAGCACTGGCATTCCCGGCAACCCACTGCCAAGCAGCGGGTCATTGACGTGGGTGTTCATCGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528181.1
CDS CAA 90 bp GGCGTGGGGCCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGGTTaGGATGCTCGAGAGGCCTTACAGCTCCTTAAGGATGATCTGAAT +
Preference number: 6 (lower is better)
Translates to: GVGPRPCWPLAGREG*DAREALQLLKDDLN
Trigger: ATTCAGATCATCCTTAAGGAGCTGTAAGGCCTCTCGAGCATCCAAACCCTCACGACCTGCAAGGGGCCAGCAGGGACGTGGCCCCACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS TCA 72 bp TCCCCCTCCAGGAAACCCCATCCAGCCTCCACGCTCTaGGAGCGGCAGGTATCCACCGATGTTTACTCACTC +
Preference number: 6 (lower is better)
Translates to: SPSRKPHPASTL*ERQVSTDVYSL
Trigger: GAGTGAGTAAACATCGGTGGATACCTGCCGCTCTCAGAGCGTGGAGGCTGGATGGGGTTTCCTGGAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356046.6
CDS CCA 72 bp CACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGGTTTaGATGCTCGAGAGGCCTTACAGCTCCTTAAGGATG +
Preference number: 6 (lower is better)
Translates to: HVPAGPLQVVRV*MLERPYSSLRM
Trigger: CATCCTTAAGGAGCTGTAAGGCCTCTCGAGCATCCAAACCCTCACGACCTGCAAGGGGCCAGCAGGGACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS CAA 72 bp CCACGTCCCTGCTGGCCCCTTGCAGGTCGTGAGGGTTaGGATGCTCGAGAGGCCTTACAGCTCCTTAAGGAT +
Preference number: 6 (lower is better)
Translates to: PRPCWPLAGREG*DAREALQLLKD
Trigger: ATCCTTAAGGAGCTGTAAGGCCTCTCGAGCATCCAAACCCTCACGACCTGCAAGGGGCCAGCAGGGACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS TCA 72 bp CGTCAGCCCATTCATTTACCCTTACAAATTGCTCTGTaGATCCCGGTGCCGGCCTCCCCGCTCTTCCCCCTC +
Preference number: 6 (lower is better)
Translates to: RQPIHLPLQIAL*IPVPASPLFPL
Trigger: GAGGGGGAAGAGCGGGGAGGCCGGCACCGGGATTCACAGAGCAATTTGTAAGGGTAAATGAATGGGCTGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356046.6
CDS GCA 72 bp TTCATTTACCCTTACAAATTGCTCTGTGAATCCCGGTaGCGGCCTCCCCGCTCTTCCCCCTCCAGGAAACCC +
Preference number: 6 (lower is better)
Translates to: FIYPYKLLCESR*RPPRSSPSRKP
Trigger: GGGTTTCCTGGAGGGGGAAGAGCGGGGAGGCCGGCACCGGGATTCACAGAGCAATTTGTAAGGGTAAATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356046.6
CDS CAA 72 bp GCCATGGGTGACTCGCCTGACTTGATGTGGATGGCTTaGGGGGAGCCCAGGGTGTATTCAAAGTCACTGCAG +
Preference number: 6 (lower is better)
Translates to: AMGDSPDLMWMA*GEPRVYSKSLQ
Trigger: CTGCAGTGACTTTGAATACACCCTGGGCTCCCCCAAAGCCATCCACATCAAGTCAGGCGAGTCACCCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528181.1
CDS TCA 72 bp GCTCCCAAGCTCCGACGATCAGCACTGAGGCTCTGCTaGCCGCTTGTCTCTAATTCTTGCCTGACACAGACA +
Preference number: 6 (lower is better)
Translates to: APKLRRSALRLC*PLVSNSCLTQT
Trigger: TGTCTGTGTCAGGCAAGAATTAGAGACAAGCGGTCAGCAGAGCCTCAGTGCTGATCGTCGGAGCTTGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350501.9
ENST00000361548.9
ENST00000530984.1
CDS TCA 72 bp GACATCTTCCTGCTCCCAAGCTCCGACGATCAGCACTaGGGCTCTGCTGACCGCTTGTCTCTAATTCTTGCC +
Preference number: 6 (lower is better)
Translates to: DIFLLPSSDDQH*GSADRLSLILA
Trigger: GGCAAGAATTAGAGACAAGCGGTCAGCAGAGCCTCAGTGCTGATCGTCGGAGCTTGGGAGCAGGAAGATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350501.9
ENST00000361548.9
ENST00000530984.1
CDS GCA 72 bp GGTAGTACCTCTTTCCTTGGTCATTCCTGCCCCCAGTaGTGGAGGACAATATCCGCTTCTCCTTGGGACCCA +
Preference number: 6 (lower is better)
Translates to: GSTSFLGHSCPQ*WRTISASPWDP
Trigger: TGGGTCCCAAGGAGAAGCGGATATTGTCCTCCAGCACTGGGGGCAGGAATGACCAAGGAAAGAGGTACTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000236255.4
ENST00000350501.9
ENST00000356046.6
ENST00000361548.9
ENST00000524724.5
CDS GCA 72 bp GGTAGTACCTCTTTCCTTGGTCATTCCTGCCCCCAGTaGTGGAGGACAATATCCGCTTCTCCTTGGGACCAG +
Preference number: 6 (lower is better)
Translates to: GSTSFLGHSCPQ*WRTISASPWDQ
Trigger: CTGGTCCCAAGGAGAAGCGGATATTGTCCTCCAGCACTGGGGGCAGGAATGACCAAGGAAAGAGGTACTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528064.5
CDS TCA 72 bp ATGCTCGAGAGGCCTTACAGCTCCTTAAGGATGATCTaGATTTTGCCGTCCAGCTCCCCCATGTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: MLERPYSSLRMI*ILPSSSPMSSR
Trigger: CCTGCTGGACATGGGGGAGCTGGACGGCAAAATTCAGATCATCCTTAAGGAGCTGTAAGGCCTCTCGAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356046.6
ENST00000361548.9
CDS CCA 72 bp TCCTTTTGGCAAGAAGATAGAAAGCCTCGATGGGATTaGGGTCGTCTGATTTCCAAGGCCCCTTCAGAGGAT +
Preference number: 6 (lower is better)
Translates to: SFWQEDRKPRWD*GRLISKAPSED
Trigger: ATCCTCTGAAGGGGCCTTGGAAATCAGACGACCCCAATCCCATCGAGGCTTTCTATCTTCTTGCCAAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524724.5
CDS TCA 72 bp AGACATTCTCTGCCCGGGAAAGTGTTTGATTTATGTTaGGGTTTGGGTGTCGAGATTTTGCTGACAGGTAGG +
Preference number: 6 (lower is better)
Translates to: RHSLPGKVFDLC*GLGVEILLTGR
Trigger: CCTACCTGTCAGCAAAATCTCGACACCCAAACCTCAACATAAATCAAACACTTTCCCGGGCAGAGAATGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361548.9
CDS CCA 72 bp CATCAGGTTATTCTTCTTGAGCAAATCTGGGTACTCTaGGGTTCCAGACACGTTCTCTGTCAGGAATTTCAT +
Preference number: 6 (lower is better)
Translates to: HQVILLEQIWVL*GSRHVLCQEFH
Trigger: ATGAAATTCCTGACAGAGAACGTGTCTGGAACCCCAGAGTACCCAGATTTGCTCAAGAAGAATAACCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000236255.4
ENST00000350501.9
ENST00000356046.6
ENST00000361548.9
ENST00000528064.5
ENST00000530984.1
CDS TCA 72 bp CTTCATAACATTCTTCTCTTCAATACAATAGGTCACTaGAGCTATAGGACCATATATACATGTTTAAACCCC +
Preference number: 6 (lower is better)
Translates to: LHNILLFNTIGH*SYRTIYTCLNP
Trigger: GGGGTTTAAACATGTATATATGGTCCTATAGCTTCAGTGACCTATTGTATTGAAGAGAAGAATGTTATGAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461318.1