RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GREB1L (Homo sapiens)

Ensembl gene IDs: ENSG00000141449

Ensembl transcript IDs: ENST00000269218.10, ENST00000424526.6, ENST00000578368.5, ENST00000578383.1, ENST00000578955.1, ENST00000579454.1, ENST00000580384.1, ENST00000580683.1, ENST00000580732.6, ENST00000581327.1, ENST00000584446.5

Found 667 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTCGTTTACATTCAGTATTAACCTGTGTGAACTGTCATACATGCTaGGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCG +
Preference number: 1 (lower is better)
Translates to: FRLHSVLTCVNCHTC*GSAGLQVSYCVGLA
Trigger: CGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACACAGGTTAATACTGAATGTAAACGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR CCA 90 bp ACATTTCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTaGCGTTGTCAGTGTAAGGTGGTAATATTTAGTGCATCTTTTAAA +
Preference number: 1 (lower is better)
Translates to: TFLFLWLNFPIRQFL*RCQCKVVIFSASFK
Trigger: TTTAAAAGATGCACTAAATATTACCACCTTACACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTAGCCAGAAGAAACCCTaGGAGGCCATCCACCCCAGG +
Preference number: 2 (lower is better)
Translates to: CELSYMLRFSRSTGELLCSQKKP*EAIHPR
Trigger: CCTGGGGTGGATGGCCTCTCAGGGTTTCTTCTGGCT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACAGCCAGAAGAAACCCTaGGAGGCCATCCACCCCAGG +
Preference number: 2 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNSQKKP*EAIHPR
Trigger: CCTGGGGTGGATGGCCTCTCAGGGTTTCTTCTGGCT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTGGAACTGAAGGAAAGTaGTGTCCCCAAAGACCTGGA +
Preference number: 2 (lower is better)
Translates to: CELSYMLRFSRSTGELLCGTEGK*CPQRPG
Trigger: TCCAGGTCTTTGGGGACATCACTTTCCTTCAGTTCC...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR GCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCAACCAAACGGTGGGTaGAGGTTACCTGCTGAAAGC +
Preference number: 2 (lower is better)
Translates to: SLSMAQFPNSAISVALSVQPNGG*RLPAES
Trigger: GCTTTCAGCAGGTAACCTGCACCCACCGTTTGGTTG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGACCTGGATCAGATTTaGGGAGTTCTTTGGAGAATT +
Preference number: 2 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCDLDQI*GVLWRI
Trigger: AATTCTCCAAAGAACTCCCCAAATCTGATCCAGGTC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAGATCTGAAGAGAAACTaGGGGTTCAGGCCTCAAACG +
Preference number: 2 (lower is better)
Translates to: PPIADTGQTPPADFNESKDLKRN*GFRPQT
Trigger: CGTTTGAGGCCTGAACCCTCAGTTTCTCTTCAGATC...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAACCAAAGTACAGATCTaGAGAGAAACTGAGGGTTCA +
Preference number: 2 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGTKVQI*RETEGS
Trigger: TGAACCCTCAGTTTCTCTTCAGATCTGTACTTTGGT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTATGTCCCCAAAGACCTaGATCAGATTTGGGGAGTTC +
Preference number: 2 (lower is better)
Translates to: CELSYMLRFSRSTGELLCMSPKT*IRFGEF
Trigger: GAACTCCCCAAATCTGATCCAGGTCTTTGGGGACAT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCTTGATTCCACACCAATaGCATGAGTCTCATGTAACA +
Preference number: 2 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCLIPHQ*HESHVT
Trigger: TGTTACATGAGACTCATGCCATTGGTGTGGAATCAA...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGGTGTCCTGTGCTTGTaGAATTTTATCCTTAAAGAA +
Preference number: 2 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPGVLCL*NFILKE
Trigger: TTCTTTAAGGATAAAATTGCACAAGCACAGGACACC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAAATCATGGTGTCCTGTaGTTGTGCAATTTTATCCTT +
Preference number: 2 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPNHGVL*LCNFIL
Trigger: AAGGATAAAATTGCACAAGCACAGGACACCATGATT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACACTTTGCTCCACAGTaGTTGTACTTTAAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGHFAPQ*LYFKGK
Trigger: TTTTCCTTTAAAGTACAATCACTGTGGAGCAAAGTG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTAAGGCAGGTCCTCTTTaGAGGACAATTAAAAATGGG +
Preference number: 2 (lower is better)
Translates to: CELSYMLRFSRSTGELLCKAGPL*RTIKNG
Trigger: CCCATTTTTAATTGTCCTTCAAAGAGGACCTGCCTT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR GCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAATTTGCTGGTGCCAACTaGTTAATTCCAACCAAACGG +
Preference number: 2 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQFAGAN*LIPTKR
Trigger: CCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR GCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACACATATGCCTCCCATTaGCGATACTGGACAAACACC +
Preference number: 2 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNTYASH*RYWTNT
Trigger: GGTGTTTGTCCAGTATCGGCAATGGGAGGCATATGT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACATGTCCCCAAAGACCTaGATCAGATTTGGGGAGTTC +
Preference number: 2 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNMSPKT*IRFGEF
Trigger: GAACTCCCCAAATCTGATCCAGGTCTTTGGGGACAT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCTCCTCAGGATCCCATaGGCAGACCGTATCTTAAGT +
Preference number: 2 (lower is better)
Translates to: GVMVFWLYSGISLPELNSLLRIP*ADRILS
Trigger: ACTTAAGATACGGTCTGCCCATGGGATCCTGAGGAG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAATTCGGCAATTTCTGTaGCGTTGTCAGTGTAAGGTG +
Preference number: 2 (lower is better)
Translates to: PPIADTGQTPPADFNESKIRQFL*RCQCKV
Trigger: CACCTTACACTGACAACGCCACAGAAATTGCCGAAT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR CAA 90 bp TCTGAAGAGAAACTGAGGGTTCAGGCCTCAAACGTTAATCTTCAATaGATTCCACACCAATGGCATGAGTCTCATGTAACACATTCAGGC +
Preference number: 2 (lower is better)
Translates to: SEEKLRVQASNVNLQ*IPHQWHESHVTHSG
Trigger: GCCTGAATGTGTTACATGAGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAACCCTCAGTTTCTCTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACGGAACTGAAGGAAAGTaGTGTCCCCAAAGACCTGGA +
Preference number: 2 (lower is better)
Translates to: YTQIMVSCACAILSLKKDGTEGK*CPQRPG
Trigger: TCCAGGTCTTTGGGGACATCACTTTCCTTCAGTTCC...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTTCCTGTAATTGGAACTaGAGGAAAGTGATGTCCCCA +
Preference number: 2 (lower is better)
Translates to: VQASNVNLQLIPHQWHESSCNWN*RKVMSP
Trigger: TGGGGACATCACTTTCCTTCAGTTCCAATTACAGGA...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACGATCTGAAGAGAAACTaGGGGTTCAGGCCTCAAACG +
Preference number: 2 (lower is better)
Translates to: YTQIMVSCACAILSLKKDDLKRN*GFRPQT
Trigger: CGTTTGAGGCCTGAACCCTCAGTTTCTCTTCAGATC...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR GCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAAAATATGTTGCACTTTaGTCCACAGTGATTGTACTT +
Preference number: 2 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGKYVAL*STVIVL
Trigger: AAGTACAATCACTGTGGAGCAAAGTGCAACATATTT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR GCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTAATGCACACAATGCCTaGTCTGCATTTACTGATTTG +
Preference number: 2 (lower is better)
Translates to: CELSYMLRFSRSTGELLCNAHNA*SAFTDL
Trigger: CAAATCAGTAAATGCAGAGCAGGCATTGTGTGCATT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp ACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCAACCAGGTTGGCTGTTGTGGTCTGTaGCTTGAAGAATCCTCAAAA +
Preference number: 2 (lower is better)
Translates to: TKPLIQATWESIFNFNQVGCCGL*LEESSK
Trigger: TTTTGAGGATTCTTCAAGTCACAGACCACAACAGCC...AACCTGGTTGAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581327.1
3UTR-3UTR TCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACACTTTGCTCCACAGTaGTTGTACTTTAAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQHFAPQ*LYFKGK
Trigger: TTTTCCTTTAAAGTACAATCACTGTGGAGCAAAGTG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAATCATTTCAAACCCCTaGGTAATACTGTACCAAAGT +
Preference number: 2 (lower is better)
Translates to: PPIADTGQTPPADFNESKIISNP*VILYQS
Trigger: ACTTTGGTACAGTATTACTCAGGGGTTTGAAATGAT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACACCAAAGTACAGATCTaGAGAGAAACTGAGGGTTCA +
Preference number: 2 (lower is better)
Translates to: YTQIMVSCACAILSLKKDTKVQI*RETEGS
Trigger: TGAACCCTCAGTTTCTCTTCAGATCTGTACTTTGGT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR TCA 90 bp TTACTAGGAACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCTTGTGGTCTGTGACTTaGAGAATCCTCAAAACCCTT +
Preference number: 2 (lower is better)
Translates to: LLGTKPLIQATWESIFNFLWSVT*RILKTL
Trigger: AAGGGTTTTGAGGATTCTTCAAGTCACAGACCACAA...GAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGTTCCTAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581327.1
3UTR-3UTR GCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGAAATATGTTGCACTTTaGTCCACAGTGATTGTACTT +
Preference number: 2 (lower is better)
Translates to: SLSMAQFPNSAISVALSVKYVAL*STVIVL
Trigger: AAGTACAATCACTGTGGAGCAAAGTGCAACATATTT...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR GCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTAATGCACACAATGCCTaGTCTGCATTTACTGATTTG +
Preference number: 2 (lower is better)
Translates to: GVMVFWLYSGISLPELNSNAHNA*SAFTDL
Trigger: CAAATCAGTAAATGCAGAGCAGGCATTGTGTGCATT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR GCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACATCTGTAGAAACATATaGCTCCCATTGCCGATACTG +
Preference number: 2 (lower is better)
Translates to: YTQIMVSCACAILSLKKDICRNI*LPLPIL
Trigger: CAGTATCGGCAATGGGAGGCATATGTTTCTACAGAT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR GCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTTTGTTCTAAGTAAATaGAGGCTTAGTAGGCCCCTC +
Preference number: 2 (lower is better)
Translates to: YTQIMVSCACAILSLKKDFVLSK*RLSRPL
Trigger: GAGGGGCCTACTAAGCCTGCATTTACTTAGAACAAA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR GCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACGGTGTCCTGTGCTTGTaGAATTTTATCCTTAAAGAA +
Preference number: 2 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNGVLCL*NFILKE
Trigger: TTCTTTAAGGATAAAATTGCACAAGCACAGGACACC...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACGACCTGGATCAGATTTaGGGAGTTCTTTGGAGAATT +
Preference number: 2 (lower is better)
Translates to: YTQIMVSCACAILSLKKDDLDQI*GVLWRI
Trigger: AATTCTCCAAAGAACTCCCCAAATCTGATCCAGGTC...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTTGATTCCACACCAATaGCATGAGTCTCATGTAACA +
Preference number: 2 (lower is better)
Translates to: YTQIMVSCACAILSLKKDLIPHQ*HESHVT
Trigger: TGTTACATGAGACTCATGCCATTGGTGTGGAATCAA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR CAA 90 bp GCCCTATGTAAATGTTATTGGAATATTGCACAGACAGTGGGTTTCTaGGTATTATTTGCATTAGGCCCTTTCAACAAAACAGGAACAAGT +
Preference number: 2 (lower is better)
Translates to: ALCKCYWNIAQTVGF*VLFALGPFNKTGTS
Trigger: ACTTGTTCCTGTTTTGTTGAAAGGGCCTAATGCAAATAATACCAAGAAACCCACTGTCTGTGCAATATTCCAATAACATTTACATAGGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR GCA 72 bp AACCTCAGCCTGACATTTAGGTTTGCTGGTGCCAACTaGTTAATTCCAACCAAACGGTGGGTGCAGGTTACC +
Preference number: 3 (lower is better)
Translates to: NLSLTFRFAGAN*LIPTKRWVQVT
Trigger: GGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAACCTAAATGTCAGGCTGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CAA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACAGACAGTGGGTTTCTaGGTATTATTTGCATTAGGC +
Preference number: 3 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGQTVGF*VLFALG
Trigger: GCCTAATGCAAATAATACCAAGAAACCCACTGTCTG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CAA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAAACATATGCCTCCCATaGCCGATACTGGACAAACAC +
Preference number: 3 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQNICLP*PILDKH
Trigger: GTGTTTGTCCAGTATCGGCAATGGGAGGCATATGTT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CAA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACATGGTGTCCTGTGCTaGTGCAATTTTATCCTTAAA +
Preference number: 3 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGHGVLC*CNFILK
Trigger: TTTAAGGATAAAATTGCACAAGCACAGGACACCATG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTAAGAAAAATCCCAAATaGTTTCTGTCCCATCCCACC +
Preference number: 3 (lower is better)
Translates to: CELSYMLRFSRSTGELLCKKNPK*FLSHPT
Trigger: GGTGGGATGGGACAGAAACAATTTGGGATTTTTCTT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CAA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAAGACCTGGATCAGATTaGGGGAGTTCTTTGGAGAAT +
Preference number: 3 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQRPGSD*GSSLEN
Trigger: ATTCTCCAAAGAACTCCCCAAATCTGATCCAGGTCT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR TCA 72 bp GAATTTAAGGGTCCTGTAATTGGAACTGAAGGAAAGTaGTGTCCCCAAAGACCTGGATCAGATTTGGGGAGT +
Preference number: 3 (lower is better)
Translates to: EFKGPVIGTEGK*CPQRPGSDLGS
Trigger: ACTCCCCAAATCTGATCCAGGTCTTTGGGGACATCACTTTCCTTCAGTTCCAATTACAGGACCCTTAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR TCA 72 bp CATTCAGTATTAACCTGTGTGAACTGTCATACATGCTaGGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTG +
Preference number: 3 (lower is better)
Translates to: HSVLTCVNCHTC*GSAGLQVSYCV
Trigger: CACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACACAGGTTAATACTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR CCA 72 bp ATTCACTCTCCAAAGTATATCCTCCTCAGGATCCCATaGGCAGACCGTATCTTAAGTAATTGCATAACTGCC +
Preference number: 3 (lower is better)
Translates to: IHSPKYILLRIP*ADRILSNCITA
Trigger: GGCAGTTATGCAATTACTTAAGATACGGTCTGCCCATGGGATCCTGAGGAGGATATACTTTGGAGAGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CAA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTCACCTAGGCATCTTTTaGCTGTTTTGGTCTCTTCAA +
Preference number: 3 (lower is better)
Translates to: VQASNVNLQLIPHQWHESHLGIF*LFWSLQ
Trigger: TTGAAGAGACCAAAACAGCAAAAAGATGCCTAGGTG...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTAATGTTATTGGAATATaGCACAGACAGTGGGTTTCT +
Preference number: 3 (lower is better)
Translates to: CELSYMLRFSRSTGELLCNVIGI*HRQWVS
Trigger: AGAAACCCACTGTCTGTGCAATATTCCAATAACATT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCACCTAGGCATCTTTTaGCTGTTTTGGTCTCTTCAA +
Preference number: 3 (lower is better)
Translates to: YTQIMVSCACAILSLKKDHLGIF*LFWSLQ
Trigger: TTGAAGAGACCAAAACAGCAAAAAGATGCCTAGGTG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACAAGAAAAATCCCAAATaGTTTCTGTCCCATCCCACC +
Preference number: 3 (lower is better)
Translates to: YTQIMVSCACAILSLKKDKKNPK*FLSHPT
Trigger: GGTGGGATGGGACAGAAACAATTTGGGATTTTTCTT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CAA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACAACGTTAATCTTCAATaGATTCCACACCAATGGCAT +
Preference number: 3 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNNVNLQ*IPHQWH
Trigger: ATGCCATTGGTGTGGAATCAATTGAAGATTAACGTT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR GCA 72 bp AAAGCTGGTCAATTAACACTATTTGTTCTAAGTAAATaGAGGCTTAGTAGGCCCCTCAGTAGTTTCAGGTCA +
Preference number: 3 (lower is better)
Translates to: KAGQLTLFVLSK*RLSRPLSSFRS
Trigger: TGACCTGAAACTACTGAGGGGCCTACTAAGCCTGCATTTACTTAGAACAAATAGTGTTAATTGACCAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR CCA 72 bp TTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTaGCGTTGTCAGTGTAAGGTGGTAATATTTAGTGCA +
Preference number: 3 (lower is better)
Translates to: FLWLNFPIRQFL*RCQCKVVIFSA
Trigger: TGCACTAAATATTACCACCTTACACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACAACGTTAATCTTCAATaGATTCCACACCAATGGCAT +
Preference number: 3 (lower is better)
Translates to: YTQIMVSCACAILSLKKDNVNLQ*IPHQWH
Trigger: ATGCCATTGGTGTGGAATCAATTGAAGATTAACGTT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCCACTGGTGGCAGGGCTaGCTGTGGGCCCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCHWWQG*LWAPAA
Trigger: GGCTGCCGGGGCCCACAGGCAGCCCTGCCACCAGTG...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACAGGCCACGTCGGCGTaGGGCAGCAGGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGQATSA*GSREEE
Trigger: CTCCTCCTCCCTGCTGCCCCACGCCGACGTGGCCTG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCCTGGTGGCTGGGCTCTaGAAGCTGGGGGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCLVAGL*KLGVRD
Trigger: GTCCCTGACCCCCAGCTTTCAGAGCCCAGCCACCAG...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTGGCCCCGGCAGCCTCTaGTGGGCTGTCCCGGCCATG +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCGPGSL*WAVPAM
Trigger: CATGGCCGGGACAGCCCATCAGAGGCTGCCGGGGCC...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCCCAGGGGCAGCCGCATaGTCTCCAGGTGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCPGAAA*SPGACP
Trigger: AGGGCAAGCACCTGGAGAGCATGCGGCTGCCCCTGG...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTCGGCTCGGCCGGGCTaGTCTCCCCACCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCSARPG*SPHPQC
Trigger: GCACTGGGGGTGGGGAGACCAGCCCGGCCGAGCCGA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424526.6
CDS-3UTR TCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGTGACGCCATGGTGGTaGGAGCCATCAGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCVTPWW*EPSGPQ
Trigger: CTGAGGCCCTGATGGCTCTCACCACCATGGCGTCAC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGTGACGCCATGGTGGTaGGAGCCATCAGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPVTPWW*EPSGPQ
Trigger: CTGAGGCCCTGATGGCTCTCACCACCATGGCGTCAC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGCTGTGGTCGCGGAGTaGCGCCATGGTGGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGAVVAE*RHGGES
Trigger: GCTCTCACCACCATGGCGTCACTCCGCGACCACAGC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAGGCCCCGGCAGCCTCTaGTGGGCTGTCCCGGCCATG +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQGPGSL*WAVPAM
Trigger: CATGGCCGGGACAGCCCATCAGAGGCTGCCGGGGCC...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGCCAGACCCACCTCCTaGTCCAAGGCCGTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPARPTS*SKAVRV
Trigger: AACTCGCACGGCCTTGGAGCAGGAGGTGGGTCTGGC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACACTGGTGGCAGGGCTaGCTGTGGGCCCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQHWWQG*LWAPAA
Trigger: GGCTGCCGGGGCCCACAGGCAGCCCTGCCACCAGTG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACCCAGTGCCGTTCCCTaGGCCGCGCTGCGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQPSAVP*AALRSA
Trigger: AGCGGAGCGCAGCGCGGCGCAGGGAACGGCACTGGG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424526.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGCGCTGCTGTTGCTCTaGGGCCGCTCCAGGTCGATG +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGALLLL*GRSRSM
Trigger: CATCGACCTGGAGCGGCCCCAGAGCAACAGCAGCGC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCCGGCTCCAGCTGAGCTaGCGGAGACCCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCRLQLS*RRPLHP
Trigger: TGGATGAAGGGGTCTCCGCCAGCTCAGCTGGAGCCG...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAAGGAGCCGTCGGGGGTaGAAGTTTCGGGTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPRSRRG*KFRVPE
Trigger: CTCTGGCACCCGAAACTTCCACCCCCGACGGCTCCT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAAGGTTGGGGGAGAGGTaGCCCAGGATACCATCCCCG +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGRLGER*PRIPSP
Trigger: CGGGGATGGTATCCTGGGTCACCTCTCCCCCAACCT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCATTGACCACCAGGAGGTaGAGGTGGCTGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPLTTRR*RWLMPS
Trigger: GGAGGGCATCAGCCACCTTCACCTCCTGGTGGTCAA...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGGGGAGTTGTCCTGGTaGCACAGGGACACACTGAGC +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCGELSW*HRDTLS
Trigger: GCTCAGTGTGTCCCTGTGTCACCAGGACAACTCCCC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCAGCCAGAAGAAACCCTaGGAGGCCATCCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCSQKKP*EAIHPR
Trigger: CCTGGGGTGGATGGCCTCTCAGGGTTTCTTCTGGCT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGGTGAGCATGCTCTCTaGCAGAGCTCGGGACTGGTG +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPGEHAL*QSSGLV
Trigger: CACCAGTCCCGAGCTCTGGCAGAGAGCATGCTCACC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCCAGCCCCAAGCTaGTGGCTGGGCTCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPHPAPS*WLGSES
Trigger: GCTTTCAGAGCCCAGCCACCAGCTTGGGGCTGGATG...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACAGGCCACGTCGGCGTaGGGCAGCAGGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQQATSA*GSREEE
Trigger: CTCCTCCTCCCTGCTGCCCCACGCCGACGTGGCCTG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGGTGAGCATGCTCTCTaGCAGAGCTCGGGACTGGTG +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGGEHAL*QSSGLV
Trigger: CACCAGTCCCGAGCTCTGGCAGAGAGCATGCTCACC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGCTAACATCGCCAGCTaGACCGAGGGCACCCTGATA +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCANIAS*TEGTLI
Trigger: TATCAGGGTGCCCTCGGTGCAGCTGGCGATGTTAGC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCCTGGGGGTCAGGGACTaGTTCTGGGACTTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCLGVRD*FWDLSA
Trigger: AGCTGACAAGTCCCAGAAGCAGTCCCTGACCCCCAG...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAAGGAGGATGGCAGCTTaGCACTCTTCTGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPRRMAA*HSSGSP
Trigger: TGGGCTCCCAGAAGAGTGGCAAGCTGCCATCCTCCT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCAGGAGGATGGCAGCTTaGCACTCTTCTGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCRRMAA*HSSGSP
Trigger: TGGGCTCCCAGAAGAGTGGCAAGCTGCCATCCTCCT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCCAGGGGCAGCCGCATaGTCTCCAGGTGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCPGAAA*SPGACP
Trigger: AGGGCAAGCACCTGGAGAGCATGCGGCTGCCCCTGG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGGCAGCACCCACGCCTaGATTATTGAACATGCCGGG +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCGSTHA*IIEHAG
Trigger: CCCGGCATGTTCAATAATGCAGGCGTGGGTGCTGCC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTTCTCCCCACCCCCAGTaGCGTTCCCTGCGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESSPHPQ*RSLRRA
Trigger: AGCGCGGCGCAGGGAACGGCACTGGGGGTGGGGAGA...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424526.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACCGAGGTCCAGGCTCTaGCTGCCACTGTCCGCTATA +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGPRSRL*LPLSAI
Trigger: TATAGCGGACAGTGGCAGCCAGAGCCTGGACCTCGG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGATGTATGGGAAGGAGCTaGCCTGGAGCACCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGCMGRS*PGAPGG
Trigger: ACCTCCTGGTGCTCCAGGTCAGCTCCTTCCCATACA...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACCTGCTCCTTCCCGCTaGGGTCCAGGGCAACAGTGG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKPAPSR*GPGQQW
Trigger: CCACTGTTGCCCTGGACCTCAGCGGGAAGGAGCAGG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGGGGCCTTTAGGCTCTaGGAAGTCAGCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGGAFRL*EVSLLL
Trigger: GAGCAGCAAGCTGACTTCTCAGAGCCTAAAGGCCCC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACTGCTGTTAGCAGTTTaGAACTCGTCCCGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGLLLAV*NSSRRR
Trigger: CCGCCTCCGGGACGAGTTTCAAACTGCTAACAGCAG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGACACAGGGACACACTaGGCACCTATCTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGDTGTH*APICRA
Trigger: AGCCCTGCAGATAGGTGCTCAGTGTGTCCCTGTGTC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAAGGGAGTCACATTCCTaGTTCAGAGTCTCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPRESHS*FRVSPA
Trigger: AGCCGGGGAGACTCTGAAGCAGGAATGTGACTCCCT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTGGTGGAAGTTTCGGGTaGCAGAGGCCGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCGGSFG*QRPGPA
Trigger: AGCTGGACCCGGCCTCTGGCACCCGAAACTTCCACC...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGTCACATCTCAGAAGTaGGCTCGTGATCCCCCACTG +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCVTSQK*ARDPPL
Trigger: CAGTGGGGGATCACGAGCCCACTTCTGAGATGTGAC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCATGATGATGACGGCTTaGAGGTGGTGCTGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCMMMTA*RWCCSP
Trigger: TGGCGAGCAGCACCACCTCCAAGCCGTCATCATCAT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGTGGAGTCAGACATCTaGGAGGCAGAGGTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCVESDI*EAEVKS
Trigger: GGACTTCACCTCTGCCTCCCAGATGTCTGACTCCAC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGGTAGCTTGATCTCCTaGTGCATAGCTAGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCGSLIS*CIARSW
Trigger: CCACGACCTAGCTATGCATCAGGAGATCAAGCTACC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGGTAGCTTGATCTCCTaGTGCATAGCTAGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPGSLIS*CIARSW
Trigger: CCACGACCTAGCTATGCATCAGGAGATCAAGCTACC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGGAGCACCAGGAGGTTaGAAGCTTCCAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPGAPGG*KLPELL
Trigger: GAGAAGTTCTGGAAGCTTTCAACCTCCTGGTGCTCC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTGCTGTGGTCGCGGAGTaGCGCCATGGTGGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESAVVAE*RHGGES
Trigger: GCTCTCACCACCATGGCGTCACTCCGCGACCACAGC...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACCCTGCTCCTTCCCGCTaGGGTCCAGGGCAACAGTGG +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNPAPSR*GPGQQW
Trigger: CCACTGTTGCCCTGGACCTCAGCGGGAAGGAGCAGG...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTCTGGTGGCTGGGCTCTaGAAGCTGGGGGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESLVAGL*KLGVRD
Trigger: GTCCCTGACCCCCAGCTTTCAGAGCCCAGCCACCAG...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACGGGACTGTTGGGTCTaGAGAGTGTATGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGRDCWV*RVYGKE
Trigger: CTCCTTCCCATACACTCTGCAGACCCAACAGTCCCG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAAGCAGCGGACGACCATaGTGTGCAGCCTGGGGTACC +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKSSGRP*CAAWGT
Trigger: GGTACCCCAGGCTGCACAGCATGGTCGTCCGCTGCT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCCGCCACAAAGTGAGTTaGAACACTGAGTTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCRHKVS*NTEFGG
Trigger: GCCACCGAACTCAGTGTTGCAACTCACTTTGTGGCG...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAGCCAGACCCACCTCCTaGTCCAAGGCCGTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKARPTS*SKAVRV
Trigger: AACTCGCACGGCCTTGGAGCAGGAGGTGGGTCTGGC...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAAGGGAGTCACATTCCTaGTTCAGAGTCTCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGRESHS*FRVSPA
Trigger: AGCCGGGGAGACTCTGAAGCAGGAATGTGACTCCCT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGGTTGGGCCAGTACTTaGGGTACAGAGGCATCTCAT +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPGWAST*GTEASH
Trigger: ATGAGATGCCTCTGTACCGCAAGTACTGGCCCAACC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACAACCAAACGGTGGGTaGAGGTTACCTGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPQPNGG*RLPAES
Trigger: GCTTTCAGCAGGTAACCTGCACCCACCGTTTGGTTG...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCCGAGGTCCAGGCTCTaGCTGCCACTGTCCGCTATA +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCPRSRL*LPLSAI
Trigger: TATAGCGGACAGTGGCAGCCAGAGCCTGGACCTCGG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACTAATGCGGGACTGTTaGGTCTGCAGAGTGTATGGG +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPLMRDC*VCRVYG
Trigger: CCCATACACTCTGCAGACCCAACAGTCCCGCATTAG...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAAATGCTGAGTGTTTCTaGTGTGCTGTGGTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPNAECF*CAVVAE
Trigger: CTCCGCGACCACAGCACACCAGAAACACTCAGCATT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACGCGCTGCTGTTGCTCTaGGGCCGCTCCAGGTCGATG +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNALLLL*GRSRSM
Trigger: CATCGACCTGGAGCGGCCCCAGAGCAACAGCAGCGC...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCCAGCCCCAAGCTGGTaGCTGGGCTCTGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVPAPSW*LGSESW
Trigger: CCAGCTTTCAGAGCCCAGCCACCAGCTTGGGGCTGG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGGTGCTGCTCGCCATCTaGGGGCCCAGGGAGTCACAT +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVVLLAI*GPRESH
Trigger: ATGTGACTCCCTGGGCCCCCAGATGGCGAGCAGCAC...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTATGACGGCTTGGAGGTaGTGCTGCTCGCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCMTAWR*CCSPSG
Trigger: CCCAGATGGCGAGCAGCACCACCTCCAAGCCGTCAT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAATGATGATGACGGCTTaGAGGTGGTGCTGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGMMMTA*RWCCSP
Trigger: TGGCGAGCAGCACCACCTCCAAGCCGTCATCATCAT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGAGGAGCCGTCGGGGGTaGAAGTTTCGGGTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVRSRRG*KFRVPE
Trigger: CTCTGGCACCCGAAACTTCCACCCCCGACGGCTCCT...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCGTCTTTCCCACCTGTaGGGGCCCTGTCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVRLSHL*GPCQQE
Trigger: CTCCTGCTGACAGGGCCCCCACAGGTGGGAAAGACG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATGGGCTGGCTGGATaGCTCCTGAACACTGTGAAT +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPHGLAG*LLNTVN
Trigger: ATTCACAGTGTTCAGGAGCCATCCAGCCAGCCCATG...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCCATGGGCTGGCTGGATaGCTCCTGAACACTGTGAAT +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCHGLAG*LLNTVN
Trigger: ATTCACAGTGTTCAGGAGCCATCCAGCCAGCCCATG...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCAAACTCCTACTTCCATaGGCTGGCTGGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCKLLLP*AGWMAP
Trigger: AGGAGCCATCCAGCCAGCCCATGGAAGTAGGAGTTT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAGGTTGGGGGAGAGGTaGCCCAGGATACCATCCCCG +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESRLGER*PRIPSP
Trigger: CGGGGATGGTATCCTGGGTCACCTCTCCCCCAACCT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAAATCGCGCCACAAAGTaGGTTGCAACACTGAGTTCG +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPNRATK*VATLSS
Trigger: CGAACTCAGTGTTGCAACTCACTTTGTGGCGCGATT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGTCTGGGAGGCAGAGGTaGAGTCCATGTACTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVSGRQR*SPCTGG
Trigger: GCCGCCAGTACATGGACTTCACCTCTGCCTCCCAGA...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGAGAATGTGAAGGCATaGAGGGTGGAGTCAGACATC +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPENVKA*RVESDI
Trigger: GATGTCTGACTCCACCCTTCATGCCTTCACATTCTC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACGGAGGTGAAGGTGGCTaGTGCCCTCCATGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNGGEGG*CPPWRG
Trigger: TCCACGCCATGGAGGGCATCAGCCACCTTCACCTCC...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTGGAGGTGAAGGTGGCTaGTGCCCTCCATGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESGGEGG*CPPWRG
Trigger: TCCACGCCATGGAGGGCATCAGCCACCTTCACCTCC...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAATTGACCACCAGGAGGTaGAGGTGGCTGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKLTTRR*RWLMPS
Trigger: GGAGGGCATCAGCCACCTTCACCTCCTGGTGGTCAA...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGCATCTCATACTCTTTaGCCACCAGGAGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCASHTL*PPGGEG
Trigger: ACCTTCACCTCCTGGTGGTCAAAGAGTATGAGATGC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCTGCTGTTAGCAGTTTaGAACTCGTCCCGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCLLLAV*NSSRRR
Trigger: CCGCCTCCGGGACGAGTTTCAAACTGCTAACAGCAG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGGGGGAGTTGTCCTGGTaGCACAGGGACACACTGAGC +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVGELSW*HRDTLS
Trigger: GCTCAGTGTGTCCCTGTGTCACCAGGACAACTCCCC...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTGGAGCTGGATGCACTaGCCTTCCCTCCATGGCTAC +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCWSWMH*PSLHGY
Trigger: GTAGCCATGGAGGGAAGGGCAGTGCATCCAGCTCCA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCCCCACTGCAGAGACTTaGTGTACTCACTCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCPTAET*CTHSSQ
Trigger: TTGGCTTGAGTGAGTACAGCAAGTCTCTGCAGTGGG...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACTCGTGATCCCCCACTaGAGAGACTTGCTGTACTCA +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGLVIPH*RDLLYS
Trigger: TGAGTACAGCAAGTCTCTGCAGTGGGGGATCACGAG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAGCAGCGGACGACCATaGTGTGCAGCCTGGGGTACC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESSSGRP*CAAWGT
Trigger: GGTACCCCAGGCTGCACAGCATGGTCGTCCGCTGCT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAAGGTTTAGGAGTCCGTaGTCATGTCGACCACTGGAA +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPRFRSP*SCRPLE
Trigger: TTCCAGTGGTCGACATGAGCACGGACTCCTAAACCT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACGGGCTGGAGTGGAGCTaGATGCACTGCCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNGLEWS*MHCPSL
Trigger: GAGGGAAGGGCAGTGCATCCAGCTCCACTCCAGCCC...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTGGGCTGGAGTGGAGCTaGATGCACTGCCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESGLEWS*MHCPSL
Trigger: GAGGGAAGGGCAGTGCATCCAGCTCCACTCCAGCCC...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCCTGTAGCCGCTCCTTaGCTAACATCGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCPVAAP*LTSPAA
Trigger: TGCAGCTGGCGATGTTAGCCAAGGAGCGGCTACAGG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAATGACGGCTTGGAGGTaGTGCTGCTCGCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKMTAWR*CCSPSG
Trigger: CCCAGATGGCGAGCAGCACCACCTCCAAGCCGTCAT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGTGAAGTCCATGTACTaGCGGCACTGTTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGVKSMY*RHCSQW
Trigger: CCACTGTGAACAGTGCCGCCAGTACATGGACTTCAC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAATCAGAAGTGGGCTCGTaGTCCCCCACTGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKSEVGS*SPTAET
Trigger: AGTCTCTGCAGTGGGGGATCACGAGCCCACTTCTGA...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTGCCGCTCCAGGTCGATaGGCAGCTCATCGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESAAPGR*AAHRSH
Trigger: ATGACTCCGATGAGCTGCTCATCGACCTGGAGCGGC...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACAACCCGAGGTCCCTGTaGCAGCGCTGCTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNNPRSL*QRCCCS
Trigger: AGAGCAACAGCAGCGCTGTCACAGGGACCTCGGGTT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTCACTCCATTCTCCATaGTGGAACCCGAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCSLHSP*WNPRSL
Trigger: CAGGGACCTCGGGTTCCATCATGGAGAATGGAGTGA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACAAAAGGCATTTTACTaGAGCTCTCGATGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPQKAFY*SSRCQA
Trigger: GGCCTGACATCGAGAGCTTCAGTAAAATGCCTTTTG...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTTCTGGGAGGCAGAGGTaGAGTCCATGTACTGGCGGC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESSGRQR*SPCTGG
Trigger: GCCGCCAGTACATGGACTTCACCTCTGCCTCCCAGA...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGCTCAAATTCTTCCCTaGGAGGTACCTGATCAGGAC +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGAQILP*EVPDQD
Trigger: GTCCTGATCAGGTACCTCTCAGGGAAGAATTTGAGC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACTGGGGGTCAGGGACTaGTTCTGGGACTTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQLGVRD*FWDLSA
Trigger: AGCTGACAAGTCCCAGAAGCAGTCCCTGACCCCCAG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACTGTACTTGGGGTCATaGACACTGACATCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPLYLGS*TLTSKG
Trigger: GCCTTTTGATGTCAGTGTGCATGACCCCAAGTACAG...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGAGAAGTCAGCTTGCTaGTCCATTTCTGTATGCCCA +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCEKSAC*SISVCP
Trigger: TGGGCATACAGAAATGGAGCAGCAAGCTGACTTCTC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTCCCGGAGGCGGAACTaGCACTCATCTTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCSRRRN*HSSSSS
Trigger: AGAGCTAGAAGATGAGTGGCAGTTCCGCCTCCGGGA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAACATATGCCTCCCATTaGCGATACTGGACAAACACC +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPTYASH*RYWTNT
Trigger: GGTGTTTGTCCAGTATCGGCAATGGGAGGCATATGT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCTTTCCCCTGCAGGAATaGGCCTGGGTTGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCFPLQE*AWVVKF
Trigger: GAATTTTACAACCCAGGCCCATTCCTGCAGGGGAAA...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAATAGCAGCAGCCTCCTaGGGTGACACACATTCATTA +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPIAAAS*GDTHSL
Trigger: TAATGAATGTGTGTCACCCCAGGAGGCTGCTGCTAT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACAGCTAGCCCATGACTaGGTTCGCTATGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGQLAHD*VRYVTK
Trigger: CTTTGTCACATAGCGAACCCAGTCATGGGCTAGCTG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACCATGCTGTGCAGCCTaGGGTACCTCTCCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQPCCAA*GTSPRV
Trigger: CACTCTTGGAGAGGTACCCCAGGCTGCACAGCATGG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCCATGCTGTGCAGCCTaGGGTACCTCTCCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVPCCAA*GTSPRV
Trigger: CACTCTTGGAGAGGTACCCCAGGCTGCACAGCATGG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAGTTTCTGGTGTGCTGTaGTCGCGGAGTGACGCCATG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKVSGVL*SRSDAM
Trigger: CATGGCGTCACTCCGCGACCACAGCACACCAGAAAC...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACTGGGCTCTGAAAGCTaGGGGTCAGGGACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKLGSES*GSGTAS
Trigger: AGAAGCAGTCCCTGACCCCCAGCTTTCAGAGCCCAG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCCAGCCCCAAGCTGGTaGCTGGGCTCTGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSPAPSW*LGSESW
Trigger: CCAGCTTTCAGAGCCCAGCCACCAGCTTGGGGCTGG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTGTGCTGCTCGCCATCTaGGGGCCCAGGGAGTCACAT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSVLLAI*GPRESH
Trigger: ATGTGACTCCCTGGGCCCCCAGATGGCGAGCAGCAC...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACAGGGAGGAGGAGGATaGCAGCTTGCCACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKQGGGG*QLATLL
Trigger: CAGAAGAGTGGCAAGCTGCCATCCTCCTCCTCCCTG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCGTCTTTCCCACCTGTaGGGGCCCTGTCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSRLSHL*GPCQQE
Trigger: CTCCTGCTGACAGGGCCCCCACAGGTGGGAAAGACG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGGACTCCTGAAGTTATaGATGGCTTTGGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPGLLKL*MALGKS
Trigger: ACTCTTCCCCAAAGCCATCCATAACTTCAGGAGTCC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCATTCTGCTTCTTTGGCTaGGTGGTGAGCTTCAAGTTA +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPFCFFG*VVSFKL
Trigger: TAACTTGAAGCTCACCACTCAGCCAAAGAAGCAGAA...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGAAGGGGCTCCGTTCTTaGAAGAGGGCGAACTGTAGG +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVKGLRS*KRANCR
Trigger: CCTACAGTTCGCCCTCTTTCAAGAACGGAGCCCCTT...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTGGAGCACCAGGAGGTTaGAAGCTTCCAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCGAPGG*KLPELL
Trigger: GAGAAGTTCTGGAAGCTTTCAACCTCCTGGTGCTCC...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCAGAGTACTGCTGGATaGGAAGATAGCAGCGGACGA +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCQSTAG*EDSSGR
Trigger: TCGTCCGCTGCTATCTTCTCATCCAGCAGTACTCTG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAGTGAGTTGCAACACTaGGTTCGGTGGCCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESSELQH*VRWPGS
Trigger: GGAACCCGGCCACCGAACTCAGTGTTGCAACTCACT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACAGTGAGTTGCAACACTaGGTTCGGTGGCCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNSELQH*VRWPGS
Trigger: GGAACCCGGCCACCGAACTCAGTGTTGCAACTCACT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACAGTGGGTCCCCGGATaGCCTCTTTTGAGACATAGC +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQQWVPG*PLLRHS
Trigger: GCTATGTCTCAAAAGAGGTCATCCGGGGACCCACTG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAATCACTCCATTCTCCATaGTGGAACCCGAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKSLHSP*WNPRSL
Trigger: CAGGGACCTCGGGTTCCATCATGGAGAATGGAGTGA...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCCACGCCTGCATTATTaGACATGCCGGGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVPRLHY*TCREAP
Trigger: TGGTGCTTCCCGGCATGTTCAATAATGCAGGCGTGG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCCTTTGCCCTCCAACCTaGACATGTTTCTTCATGAGA +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCLCPPT*TCFFMR
Trigger: TCTCATGAAGAAACATGTTCAGGTTGGAGGGCAAAG...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCCAGCACAGGACTCCTaGAGTTATGGATGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCPAQDS*SYGWLW
Trigger: CCAAAGCCATCCATAACTTCAGGAGTCCTGTGCTGG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGACACCCCTTCACAGTTaGCATTGCTGGAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVTPLHS*HCWSGV
Trigger: GACCCCACTCCAGCAATGTCAACTGTGAAGGGGTGT...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAACACCCCTTCACAGTTaGCATTGCTGGAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKTPLHS*HCWSGV
Trigger: GACCCCACTCCAGCAATGTCAACTGTGAAGGGGTGT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTTCCCTGAGAGGTACCTaGTCAGGACCCAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSSLRGT*SGPSRT
Trigger: TGTGCGGCTGGGTCCTGATCAGGTACCTCTCAGGGA...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCATCCTGTAATTGGAACTaGAGGAAAGTGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPSCNWN*RKVMSP
Trigger: TGGGGACATCACTTTCCTTCAGTTCCAATTACAGGA...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAAACTGTCATACATGCTaGGGTTCAGCAGGTCTACAG +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGNCHTC*GSAGLQ
Trigger: CTGTAGACCTGCTGAACCTCAGCATGTATGACAGTT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp ACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCAACCAGGTTGGTGAGCATGCTCTCTaGCAGAGCTCGGGACTGGTG +
Preference number: 4 (lower is better)
Translates to: TKPLIQATWESIFNFNQVGEHAL*QSSGLV
Trigger: CACCAGTCCCGAGCTCTGGCAGAGAGCATGCTCACC...AACCTGGTTGAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR GCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACGGGACTGTTGGGTCTaGAGAGTGTATGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKRDCWV*RVYGKE
Trigger: CTCCTTCCCATACACTCTGCAGACCCAACAGTCCCG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTCCGGGTCCAGCTGGTTaGTATAGTCAGCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESPGPAG*YSQRGA
Trigger: AGCACCACGCTGACTATAGCAACCAGCTGGACCCGG...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCATTCTTGTTTGACCCCTaGCAGCTTCTCAGTATACAC +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPFLFDP*QLLSIH
Trigger: GTGTATACTGAGAAGCTGGCAGGGGTCAAACAAGAA...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTGGCAGCACCCACGCCTaGATTATTGAACATGCCGGG +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESGSTHA*IIEHAG
Trigger: CCCGGCATGTTCAATAATGCAGGCGTGGGTGCTGCC...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGTCCCGGAGGCGGAACTaGCACTCATCTTCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVSRRRN*HSSSSS
Trigger: AGAGCTAGAAGATGAGTGGCAGTTCCGCCTCCGGGA...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGGGATAAGAGTTTTCTaGCAACTGTTAGCTGCGGTT +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCGIRVF*QLLAAV
Trigger: AACCGCAGCTAACAGTTGCCAGAAAACTCTTATCCC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACGTTTCTGGTGTGCTGTaGTCGCGGAGTGACGCCATG +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNVSGVL*SRSDAM
Trigger: CATGGCGTCACTCCGCGACCACAGCACACCAGAAAC...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACCCTGTAGCCGCTCCTTaGCTAACATCGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNPVAAP*LTSPAA
Trigger: TGCAGCTGGCGATGTTAGCCAAGGAGCGGCTACAGG...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCAGGGATCCACTCTTCTaGTTCATTTCCTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCRDPLF*FISSPT
Trigger: AGTTGGAGAGGAAATGAACCAGAAGAGTGGATCCCT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAAGGGATCCACTCTTCTaGTTCATTTCCTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPRDPLF*FISSPT
Trigger: AGTTGGAGAGGAAATGAACCAGAAGAGTGGATCCCT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCGGCTCCAGCTGAGCTaGCGGAGACCCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDRLQLS*RRPLHP
Trigger: TGGATGAAGGGGTCTCCGCCAGCTCAGCTGGAGCCG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTGTGAAGTCCATGTACTaGCGGCACTGTTCACAGTGG +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCVKSMY*RHCSQW
Trigger: CCACTGTGAACAGTGCCGCCAGTACATGGACTTCAC...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGGTGGAGTCAGACATCTaGGAGGCAGAGGTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVVESDI*EAEVKS
Trigger: GGACTTCACCTCTGCCTCCCAGATGTCTGACTCCAC...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGGACTCCTGAAGTTATaGATGGCTTTGGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGGLLKL*MALGKS
Trigger: ACTCTTCCCCAAAGCCATCCATAACTTCAGGAGTCC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCAAGCGGACAATTGTTTaGCGCAAGGAACTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCKRTIV*RKELLS
Trigger: AGACAGAAGTTCCTTGCGCCAAACAATTGTCCGCTT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAATGTCCCCAAAGACCTaGATCAGATTTGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGMSPKT*IRFGEF
Trigger: GAACTCCCCAAATCTGATCCAGGTCTTTGGGGACAT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCATTCGGCAATTTCTGTaGCGTTGTCAGTGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCIRQFL*RCQCKV
Trigger: CACCTTACACTGACAACGCCACAGAAATTGCCGAAT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCCTCCACCTTGGGTTTaGCATCTGCAGATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCPPPWV*HLQMRK
Trigger: CTTTCTCATCTGCAGATGTCAAACCCAAGGTGGAGG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTGGGGCAGGTTTTTGTaGATAGGGAATTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCWGRFL*IGNWWA
Trigger: AGCCCACCAATTCCCTATTCACAAAAACCTGCCCCA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAATAGCTAGGTCGTGGTaGCAAAGAGTAATTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGIARSW*QRVIPC
Trigger: ACAGGGAATTACTCTTTGTCACCACGACCTAGCTAT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCATGTGGTTTTGAAATGTaGTGCCAGGAAACTGACCTT +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPCGFEM*CQETDL
Trigger: AAGGTCAGTTTCCTGGCATCACATTTCAAAACCACA...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTGTCTACAAGGACACCTaGTTGTCGAATCCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCVYKDT*LSNPLK
Trigger: CTTCAGCGGATTCGACAATCAGGTGTCCTTGTAGAC...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCTATCAGCTAGCCCATaGCTGGGTTCGCTATGTGAC +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVLSASP*LGSLCD
Trigger: GTCACATAGCGAACCCAGTCATGGGCTAGCTGATAG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTTCAGAAGTGGGCTCGTaGTCCCCCACTGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSSEVGS*SPTAET
Trigger: AGTCTCTGCAGTGGGGGATCACGAGCCCACTTCTGA...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCCGGGTTCCCAAGGATaGTCTCAAACCGATACTGCA +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVPGSQG*SQTDTA
Trigger: TGCAGTATCGGTTTGAGATCATCCTTGGGAACCCGG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACCGGGTTCCCAAGGATaGTCTCAAACCGATACTGCA +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKPGSQG*SQTDTA
Trigger: TGCAGTATCGGTTTGAGATCATCCTTGGGAACCCGG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACCGGATGACCTCTTTTaGGACATAGCAGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKPDDLF*DIAACQ
Trigger: CTGGCATGCTGCTATGTCTCAAAAGAGGTCATCCGG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACCAGTGGGTCCCCGGATaGCCTCTTTTGAGACATAGC +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNQWVPG*PLLRHS
Trigger: GCTATGTCTCAAAAGAGGTCATCCGGGGACCCACTG...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACGCCGCTCCAGGTCGATaGGCAGCTCATCGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDAAPGR*AAHRSH
Trigger: ATGACTCCGATGAGCTGCTCATCGACCTGGAGCGGC...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACAACCCGAGGTCCCTGTaGCAGCGCTGCTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDNPRSL*QRCCCS
Trigger: AGAGCAACAGCAGCGCTGTCACAGGGACCTCGGGTT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACATTGTGATCGGTGTTaGTCTCCTCCTCATCATACA +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGHCDRC*SPPHHT
Trigger: TGTATGATGAGGAGGAGATCAACACCGATCACAATG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTGGGGCCTTTAGGCTCTaGGAAGTCAGCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSGAFRL*EVSLLL
Trigger: GAGCAGCAAGCTGACTTCTCAGAGCCTAAAGGCCCC...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTATGAAATCATGCACGTaGCACCTAGAGAATGGGGCC +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCMKSCT*HLENGA
Trigger: GGCCCCATTCTCTAGGTGTCACGTGCATGATTTCAT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGATTATATGAGGCGTGCTaGAGGAATTTCTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGLYEAC*RNFSRR
Trigger: TCTCCTGGAGAAATTCCTTCAGCACGCCTCATATAA...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCCAGCACAGGACTCCTaGAGTTATGGATGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVPAQDS*SYGWLW
Trigger: CCAAAGCCATCCATAACTTCAGGAGTCCTGTGCTGG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTGACACAGGGACACACTaGGCACCTATCTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSDTGTH*APICRA
Trigger: AGCCCTGCAGATAGGTGCTCAGTGTGTCCCTGTGTC...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGATCCTGTAATTGGAACTaGAGGAAAGTGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGSCNWN*RKVMSP
Trigger: TGGGGACATCACTTTCCTTCAGTTCCAATTACAGGA...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCTCGTGATCCCCCACTaGAGAGACTTGCTGTACTCA +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVLVIPH*RDLLYS
Trigger: TGAGTACAGCAAGTCTCTGCAGTGGGGGATCACGAG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTGCTAACATCGCCAGCTaGACCGAGGGCACCCTGATA +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSANIAS*TEGTLI
Trigger: TATCAGGGTGCCCTCGGTGCAGCTGGCGATGTTAGC...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGGGGACTTGTCAGCTGTaGTGGAAGAGCTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVGTCQL*WKSSLH
Trigger: ATGGAGTGAGCTCTTCCAGCACAGCTGACAAGTCCC...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCCGGGTCCAGCTGGTTaGTATAGTCAGCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSPGPAG*YSQRGA
Trigger: AGCACCACGCTGACTATAGCAACCAGCTGGACCCGG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGATTCTTGTTTGACCCCTaGCAGCTTCTCAGTATACAC +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGFLFDP*QLLSIH
Trigger: GTGTATACTGAGAAGCTGGCAGGGGTCAAACAAGAA...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCATCTGTAGAAACATATaGCTCCCATTGCCGATACTG +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCICRNI*LPLPIL
Trigger: CAGTATCGGCAATGGGAGGCATATGTTTCTACAGAT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCTTTGTTCTAAGTAAATaGAGGCTTAGTAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCFVLSK*RLSRPL
Trigger: GAGGGGCCTACTAAGCCTGCATTTACTTAGAACAAA...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGCTTCTATGGAGTTGTaGAGAGCTTCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGASMEL*RASSNR
Trigger: TCGATTTGAGGAAGCTCTCCACAACTCCATAGAAGC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACACAACTAAGCCAGGTTaGGGGAGAGGTGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNTTKPG*GRGDPG
Trigger: TCCTGGGTCACCTCTCCCCCAACCTGGCTTAGTTGT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGCTATAGCACACACCTaGGATAAGAGTTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGAIAHT*DKSFLA
Trigger: TGCCAGAAAACTCTTATCCCAGGTGTGTGCTATAGC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACGTCACATCTCAGAAGTaGGCTCGTGATCCCCCACTG +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNVTSQK*ARDPPL
Trigger: CAGTGGGGGATCACGAGCCCACTTCTGAGATGTGAC...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAACTTTTGTTTTTGCCTaGGGAGCTGATGAGGTCATC +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGTFVFA*GADEVI
Trigger: GATGACCTCATCAGCTCCCCAGGCAAAAACAAAAGT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCATCCAGCCCCAAGCTaGTGGCTGGGCTCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDHPAPS*WLGSES
Trigger: GCTTTCAGAGCCCAGCCACCAGCTTGGGGCTGGATG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAGACTGTAGGCCGCTTTaGATAGGATCACCACTGGTG +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQDCRPL*IGSPLV
Trigger: CACCAGTGGTGATCCTATCCAAAGCGGCCTACAGTC...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCAGGGAGGAGGAGGATaGCAGCTTGCCACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSQGGGG*QLATLL
Trigger: CAGAAGAGTGGCAAGCTGCCATCCTCCTCCTCCCTG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTCTTCCATGGGCTGGCTaGATGGCTCCTGAACACTGT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESLPWAG*MAPEHC
Trigger: ACAGTGTTCAGGAGCCATCCAGCCAGCCCATGGAAG...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACCTTCCATGGGCTGGCTaGATGGCTCCTGAACACTGT +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNLPWAG*MAPEHC
Trigger: ACAGTGTTCAGGAGCCATCCAGCCAGCCCATGGAAG...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAAGGACACATTCTTACTaGAAACTCCTACTTCCATGG +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPRTHSY*KLLLPW
Trigger: CCATGGAAGTAGGAGTTTCCAGTAAGAATGTGTCCT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGGACAATTTTTGGTGTaGCTTCAATGTGCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCGQFLV*LQCAAR
Trigger: TCTTGCAGCACATTGAAGCCACACCAAAAATTGTCC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCTCCTCAGGATCCCATaGGCAGACCGTATCTTAAGT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCLLRIP*ADRILS
Trigger: ACTTAAGATACGGTCTGCCCATGGGATCCTGAGGAG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCATTGTTCCATACACAGTaGTACCAAACGCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPLFHTQ*YQTQIL
Trigger: AAGGATTTGCGTTTGGTATCACTGTGTATGGAACAA...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCACCCTGGGAGCTTCTaGCTAGGTAGTACTTTAAGT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCHPGSF*LGSTLS
Trigger: ACTTAAAGTACTACCTAGTCAGAAGCTCCCAGGGTG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAGCAGCCTCCTGGGGTaGCACACATTCATTAAGGTC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESSSLLG*HTFIKV
Trigger: GACCTTAATGAATGTGTGTCACCCCAGGAGGCTGCT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAGTCTACAAGGACACCTaGTTGTCGAATCCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQVYKDT*LSNPLK
Trigger: CTTCAGCGGATTCGACAATCAGGTGTCCTTGTAGAC...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTGTATGGGAAGGAGCTaGCCTGGAGCACCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDCMGRS*PGAPGG
Trigger: ACCTCCTGGTGCTCCAGGTCAGCTCCTTCCCATACA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTCCAGCTGTATCCAGTaGACCTCATTGCTAGAGCTA +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCSSCIQ*TSLLEL
Trigger: TAGCTCTAGCAATGAGGTTCACTGGATACAGCTGGA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAAATCGCGCCACAAAGTaGGTTGCAACACTGAGTTCG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKNRATK*VATLSS
Trigger: CGAACTCAGTGTTGCAACTCACTTTGTGGCGCGATT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACCCGGATGACCTCTTTTaGGACATAGCAGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNPDDLF*DIAACQ
Trigger: CTGGCATGCTGCTATGTCTCAAAAGAGGTCATCCGG...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCATTGCTGAAGACAAAATaGCTCTCTTTGGATTTGGGA +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPLLKTK*LSLDLG
Trigger: TCCCAAATCCAAAGAGAGTCATTTTGTCTTCAGCAA...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAGCATCTCATACTCTTTaGCCACCAGGAGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQASHTL*PPGGEG
Trigger: ACCTTCACCTCCTGGTGGTCAAAGAGTATGAGATGC...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACAGTGGGGTCTGGAGCTaGTATAGCATATGGCCACCT +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNSGVWS*YSIWPP
Trigger: AGGTGGCCATATGCTATATCAGCTCCAGACCCCACT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAGTGGGGTCTGGAGCTaGTATAGCATATGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESSGVWS*YSIWPP
Trigger: AGGTGGCCATATGCTATATCAGCTCCAGACCCCACT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAGCTCAAATTCTTCCCTaGGAGGTACCTGATCAGGAC +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQAQILP*EVPDQD
Trigger: GTCCTGATCAGGTACCTCTCAGGGAAGAATTTGAGC...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGGATCTGAAGAGAAACTaGGGGTTCAGGCCTCAAACG +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVDLKRN*GFRPQT
Trigger: CGTTTGAGGCCTGAACCCTCAGTTTCTCTTCAGATC...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAGATCTGAAGAGAAACTaGGGGTTCAGGCCTCAAACG +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQDLKRN*GFRPQT
Trigger: CGTTTGAGGCCTGAACCCTCAGTTTCTCTTCAGATC...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAAAGGCAGGTCCTCTTTaGAGGACAATTAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGKAGPL*RTIKNG
Trigger: CCCATTTTTAATTGTCCTTCAAAGAGGACCTGCCTT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp ACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCAACCAGGTTGTCTGTCCCAAGGACTaGCTTCCTCCTCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: TKPLIQATWESIFNFNQVVCPKD*LPPLGL
Trigger: CAGACCAAGAGGAGGAAGTCAGTCCTTGGGACAGAC...AACCTGGTTGAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR TCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAGCTTTTTGTGCACCATaGTGCAGATGTCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQAFCAP*CRCLPQ
Trigger: CTGAGGGAGACATCTGCATCATGGTGCACAAAAAGC...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580732.6
CDS-3UTR GCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAAACAACATATTTTTCTaGTCTCTGATGGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGNNIFF*SLMGCP
Trigger: GGGACAGCCCATCAGAGAGCAGAAAAATATGTTGTT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACCCACTGCAGAGACTTaGTGTACTCACTCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQPTAET*CTHSSQ
Trigger: TTGGCTTGAGTGAGTACAGCAAGTCTCTGCAGTGGG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAATCTCAAACCGATACTaGAGACCCAGTTTGTCGCGC +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQISNRY*RPSLSR
Trigger: GCGCGACAAACTGGGTCTGCAGTATCGGTTTGAGAT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAATCTCAAACCGATACTaGAGACCCAGTTTGTCGCGC +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKISNRY*RPSLSR
Trigger: GCGCGACAAACTGGGTCTGCAGTATCGGTTTGAGAT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTGAGAAGTCAGCTTGCTaGTCCATTTCTGTATGCCCA +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCEKSAC*SISVCP
Trigger: TGGGCATACAGAAATGGAGCAGCAAGCTGACTTCTC...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAAATGCACACAATGCCTaGTCTGCATTTACTGATTTG +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPNAHNA*SAFTDL
Trigger: CAAATCAGTAAATGCAGAGCAGGCATTGTGTGCATT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACCAACCAAACGGTGGGTaGAGGTTACCTGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNQPNGG*RLPAES
Trigger: GCTTTCAGCAGGTAACCTGCACCCACCGTTTGGTTG...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAGATGAGAAAGGATGCTaGTCAGGGTCCAGGTATAGC +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQDEKGC*SGSRYS
Trigger: GCTATACCTGGACCCTGACCAGCATCCTTTCTCATC...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTACAACTAAGCCAGGTTaGGGGAGAGGTGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSTTKPG*GRGDPG
Trigger: TCCTGGGTCACCTCTCCCCCAACCTGGCTTAGTTGT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAATCCACGCTCAGAAATTaGCTGCCGGTCAACCCTAAT +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKSTLRN*LPVNPN
Trigger: ATTAGGGTTGACCGGCAGCCAATTTCTGAGCGTGGA...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACAGCTAGCCCATGACTaGGTTCGCTATGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKQLAHD*VRYVTK
Trigger: CTTTGTCACATAGCGAACCCAGTCATGGGCTAGCTG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTCTAATGCGGGACTGTTaGGTCTGCAGAGTGTATGGG +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESLMRDC*VCRVYG
Trigger: CCCATACACTCTGCAGACCCAACAGTCCCGCATTAG...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCATTTGGTCAGCATTATaGATACAGTTTCCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCIWSAL*IQFPVS
Trigger: GGAAACGGGAAACTGTATCCATAATGCTGACCAAAT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAAAAGGCCAGACACACTaGCGTTTAATGCCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQKGQTH*RLMPSS
Trigger: GGAGCTAGGCATTAAACGCCAGTGTGTCTGGCCTTT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGGACAATTTTTGGTGTaGCTTCAATGTGCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGGQFLV*LQCAAR
Trigger: TCTTGCAGCACATTGAAGCCACACCAAAAATTGTCC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCATAGTGGACAATTTTTaGTGTGGCTTCAATGTGCTG +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCIVDNF*CGFNVL
Trigger: CAGCACATTGAAGCCACACCAAAAATTGTCCACTAT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTATTGAAGGGGCAAGATaGGTGCTAAGCTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCIEGAR*VLSSLT
Trigger: TGTCAGAGAGCTTAGCACCCATCTTGCCCCTTCAAT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGACCTGGATCAGATTTaGGGAGTTCTTTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGDLDQI*GVLWRI
Trigger: AATTCTCCAAAGAACTCCCCAAATCTGATCCAGGTC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAATTTGACATCTGCAGATaGGAAAGGATGCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKFDICR*ERMLVR
Trigger: CCTGACCAGCATCCTTTCTCATCTGCAGATGTCAAA...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACTGGGGCAGGTTTTTGTaGATAGGGAATTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNWGRFL*IGNWWA
Trigger: AGCCCACCAATTCCCTATTCACAAAAACCTGCCCCA...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAAAATCCTTTCCTGCTTaGCAAAAACCATCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGKSFPA*QKPSVV
Trigger: CACTACAGATGGTTTTTGTCAAGCAGGAAAGGATTT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCATGTCTGAGTGAATCCTaGTTTGTATCCATTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPCLSES*FVSISC
Trigger: ACAACTAATGGATACAAATCAGGATTCACTCAGACA...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTAGCAGCCTCCTGGGGTaGCACACATTCATTAAGGTC +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSSSLLG*HTFIKV
Trigger: GACCTTAATGAATGTGTGTCACCCCAGGAGGCTGCT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAATTATCACTTCTTGTTTaGCCCCTGCCAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKLSLLV*PLPASQ
Trigger: CTGAGAAGCTGGCAGGGGTCAAACAAGAAGTGATAA...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAATTATCACTTCTTGTTTaGCCCCTGCCAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQLSLLV*PLPASQ
Trigger: CTGAGAAGCTGGCAGGGGTCAAACAAGAAGTGATAA...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGATTCAAATTCTTGTCTaGAACCAGGGGCAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVIQILV*NQGQPH
Trigger: ATGCGGCTGCCCCTGGTTTCAGACAAGAATTTGAAT...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCCACGCCTGCATTATTaGACATGCCGGGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDPRLHY*TCREAP
Trigger: TGGTGCTTCCCGGCATGTTCAATAATGCAGGCGTGG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTCATACTGCACATTCTaGGTCAAGTCTGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCSYCTF*VKSVLR
Trigger: CCTCAACACAGACTTGACTCAGAATGTGCAGTATGA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACACTTTGCTCCACAGTaGTTGTACTTTAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPHFAPQ*LYFKGK
Trigger: TTTTCCTTTAAAGTACAATCACTGTGGAGCAAAGTG...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAAACTGTCATACATGCTaGGGTTCAGCAGGTCTACAG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKNCHTC*GSAGLQ
Trigger: CTGTAGACCTGCTGAACCTCAGCATGTATGACAGTT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACAGTTGCCCAGCATATaGATTCCCCATGATCTTGGT +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQQLPSI*IPHDLG
Trigger: ACCAAGATCATGGGGAATTCATATGCTGGGCAACTG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTGCAGATGAGAAAGGATaGTGGTCAGGGTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESADEKG*WSGSRY
Trigger: ATACCTGGACCCTGACCAGCATCCTTTCTCATCTGC...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACGCAGATGAGAAAGGATaGTGGTCAGGGTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNADEKG*WSGSRY
Trigger: ATACCTGGACCCTGACCAGCATCCTTTCTCATCTGC...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTGGGACTTGTCAGCTGTaGTGGAAGAGCTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSGTCQL*WKSSLH
Trigger: ATGGAGTGAGCTCTTCCAGCACAGCTGACAAGTCCC...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCTGTACTTGGGGTCATaGACACTGACATCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVLYLGS*TLTSKG
Trigger: GCCTTTTGATGTCAGTGTGCATGACCCCAAGTACAG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAGGTTTAGGAGTCCGTaGTCATGTCGACCACTGGAA +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESRFRSP*SCRPLE
Trigger: TTCCAGTGGTCGACATGAGCACGGACTCCTAAACCT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTGGTTGGGCCAGTACTTaGGGTACAGAGGCATCTCAT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSGWAST*GTEASH
Trigger: ATGAGATGCCTCTGTACCGCAAGTACTGGCCCAACC...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAGTGGCTTCAATGTGCTaGAAGACAGTCTTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKVASMC*KTVFKD
Trigger: GTCCTTGAAGACTGTCTTGCAGCACATTGAAGCCAC...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAGGTGTGGCTTCAATGTaGTGCAAGACAGTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQGVASM*CKTVFK
Trigger: CTTGAAGACTGTCTTGCAGCACATTGAAGCCACACC...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGCTTTCAGCATAATTTaGTCAAATTCTTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPAFSII*SNSSLR
Trigger: TCTCAGGGAAGAATTTGAGCAAATTATGCTGAAAGC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTTAAGGTCTCTGAAATaGCCTCCGCCAAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCLRSLK*PPPKSS
Trigger: AGAACTCTTTGGCGGAGGGCATTTCAGAGACCTTAA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTTTGCTGGTGCCAACTaGTTAATTCCAACCAAACGG +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCFAGAN*LIPTKR
Trigger: CCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCAATCATGGTGTCCTGTaGTTGTGCAATTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCNHGVL*LCNFIL
Trigger: AAGGATAAAATTGCACAAGCACAGGACACCATGATT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTGATGAGAAAGGATGCTaGTCAGGGTCCAGGTATAGC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESDEKGC*SGSRYS
Trigger: GCTATACCTGGACCCTGACCAGCATCCTTTCTCATC...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACCGGTGTCGTTTCTTTaGTGGCCCAGAAATGAACAT +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKPVSFL*WPRNEH
Trigger: ATGTTCATTTCTGGGCCACCAAAGAAACGACACCGG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCATGGGCTCTTCAACTTTaGATTCCTTTATCACTTCTT +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPWALQL*IPLSLL
Trigger: AAGAAGTGATAAAGGAATCCAAAGTTGAAGAGCCCA...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCAGTTTCCCGTTTCCTaGGCTCTTCAACTTTGGATT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCQFPVS*ALQLWI
Trigger: AATCCAAAGTTGAAGAGCCCAGGAAACGGGAAACTG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCATATAGGCTGCATATTTaGTCAGCATTATGGATACAG +
Preference number: 4 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPYRLHI*SALWIQ
Trigger: CTGTATCCATAATGCTGACCAAATATGCAGCCTATA...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAATTGAAGGGGCAAGATaGGTGCTAAGCTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQIEGAR*VLSSLT
Trigger: TGTCAGAGAGCTTAGCACCCATCTTGCCCCTTCAAT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTCTCCTCAGGATCCCATaGGCAGACCGTATCTTAAGT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESLLRIP*ADRILS
Trigger: ACTTAAGATACGGTCTGCCCATGGGATCCTGAGGAG...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGATTGATTCCACACCAATaGCATGAGTCTCATGTAACA +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGLIPHQ*HESHVT
Trigger: TGTTACATGAGACTCATGCCATTGGTGTGGAATCAA...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACATATGAATTCCCCATaGTCTACACCTTGGTTTATT +
Preference number: 4 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGHMNSP*STPWFI
Trigger: AATAAACCAAGGTGTAGATCATGGGGAATTCATATG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424526.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCCACACTACTACATCTaGGGGAGGCTTCTATGGAGT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSPHYYI*GRLLWS
Trigger: ACTCCATAGAAGCCTCCCTCAGATGTAGTAGTGTGG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCCTCCACCTTGGGTTTaGCATCTGCAGATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSPPPWV*HLQMRK
Trigger: CTTTCTCATCTGCAGATGTCAAACCCAAGGTGGAGG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCAGCATCTGTCTGAGTaGATCCTGATTTGTATCCAT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCQHLSE*ILICIH
Trigger: ATGGATACAAATCAGGATTCACTCAGACAGATGCTG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTGTGGTTTTGAAATGTaGTGCCAGGAAACTGACCTT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCCGFEM*CQETDL
Trigger: AAGGTCAGTTTCCTGGCATCACATTTCAAAACCACA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TTACTAGGAACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCAGCAGCCTCCTGGGGTaGCACACATTCATTAAGGTC +
Preference number: 4 (lower is better)
Translates to: LLGTKPLIQATWESIFNFSSLLG*HTFIKV
Trigger: GACCTTAATGAATGTGTGTCACCCCAGGAGGCTGCT...GAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGTTCCTAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTTCCAGCTGTATCCAGTaGACCTCATTGCTAGAGCTA +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESSSCIQ*TSLLEL
Trigger: TAGCTCTAGCAATGAGGTTCACTGGATACAGCTGGA...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCAGAGTACTGCTGGATaGGAAGATAGCAGCGGACGA +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDQSTAG*EDSSGR
Trigger: TCGTCCGCTGCTATCTTCTCATCCAGCAGTACTCTG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTCAAAAGGCATTTTACTaGAGCTCTCGATGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESQKAFY*SSRCQA
Trigger: GGCCTGACATCGAGAGCTTCAGTAAAATGCCTTTTG...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTATTCAAATTCTTGTCTaGAACCAGGGGCAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESIQILV*NQGQPH
Trigger: ATGCGGCTGCCCCTGGTTTCAGACAAGAATTTGAAT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGAGTGTCTCATTTCACTaGGAGTCCTTAAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVSVSFH*ESLRSL
Trigger: CAGAGACCTTAAGGACTCTCAGTGAAATGAGACACT...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACGCTCAGAAATTGGCTaGCGGTCAACCCTAATTTTT +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKRSEIG*RSTLIF
Trigger: AAAAATTAGGGTTGACCGGCAGCCAATTTCTGAGCG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCGCCACAAAGTGAGTTaGAACACTGAGTTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDRHKVS*NTEFGG
Trigger: GCCACCGAACTCAGTGTTGCAACTCACTTTGTGGCG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCCTGCTCCAAGGCCGTaGGAGTTAAATAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSPAPRP*ELNSLS
Trigger: ACTCAAGCTATTTAACTCGCACGGCCTTGGAGCAGG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTGTGGCTTCAATGTGCTaGAAGACAGTCTTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESVASMC*KTVFKD
Trigger: GTCCTTGAAGACTGTCTTGCAGCACATTGAAGCCAC...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAATCTGAGAAGTCAGCTTaGTGCTCCATTTCTGTATGC +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKSEKSA*CSISVC
Trigger: GCATACAGAAATGGAGCAGCAAGCTGACTTCTCAGA...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTACATATGCCTCCCATTaGCGATACTGGACAAACACC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESTYASH*RYWTNT
Trigger: GGTGTTTGTCCAGTATCGGCAATGGGAGGCATATGT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGGCTTCTATGGAGTTGTaGAGAGCTTCCTCAAATCGA +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVASMEL*RASSNR
Trigger: TCGATTTGAGGAAGCTCTCCACAACTCCATAGAAGC...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGGTGTCGTTTCTTTGGTaGCCCAGAAATGAACATGGT +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVVSFLW*PRNEHG
Trigger: ACCATGTTCATTTCTGGGCCACCAAAGAAACGACAC...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTCCGGTGTCGTTTCTTTaGTGGCCCAGAAATGAACAT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESPVSFL*WPRNEH
Trigger: ATGTTCATTTCTGGGCCACCAAAGAAACGACACCGG...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACATAGCAGCAGCCTCCTaGGGTGACACACATTCATTA +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNIAAAS*GDTHSL
Trigger: TAATGAATGTGTGTCACCCCAGGAGGCTGCTGCTAT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGGCTATAGCACACACCTaGGATAAGAGTTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVAIAHT*DKSFLA
Trigger: TGCCAGAAAACTCTTATCCCAGGTGTGTGCTATAGC...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACAATGCTGAGTGTTTCTaGTGTGCTGTGGTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDNAECF*CAVVAE
Trigger: CTCCGCGACCACAGCACACCAGAAACACTCAGCATT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACAGACCGTCTAAATCTTaGTATGTCCGAGGGATCCAC +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNRPSKS*YVRGIH
Trigger: GTGGATCCCTCGGACATACCAAGATTTAGACGGTCT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTAGTACTTCAAAGACCTaGGAAAGGTTTCTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCSTSKT*ERFLQE
Trigger: CTCTTGGAGAAACCTTTCCCAGGTCTTTGAAGTACT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACGACTGTAGGCCGCTTTaGATAGGATCACCACTGGTG +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDDCRPL*IGSPLV
Trigger: CACCAGTGGTGATCCTATCCAAAGCGGCCTACAGTC...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACAGTTTCCCGTTTCCTaGGCTCTTCAACTTTGGATT +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKQFPVS*ALQLWI
Trigger: AATCCAAAGTTGAAGAGCCCAGGAAACGGGAAACTG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACAAACTCCTACTTCCATaGGCTGGCTGGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDKLLLP*AGWMAP
Trigger: AGGAGCCATCCAGCCAGCCCATGGAAGTAGGAGTTT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTGCATATGGCCACCTCTaGTCCAATGTTAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESAYGHL*SNVKVA
Trigger: TGCTACCTTAACATTGGACCAGAGGTGGCCATATGC...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTTTTGACATCTGCAGATaGGAAAGGATGCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSFDICR*ERMLVR
Trigger: CCTGACCAGCATCCTTTCTCATCTGCAGATGTCAAA...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTTGTTCCATACACAGTaGTACCAAACGCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCLFHTQ*YQTQIL
Trigger: AAGGATTTGCGTTTGGTATCACTGTGTATGGAACAA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCAGCATCTGTCTGAGTaGATCCTGATTTGTATCCAT +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVQHLSE*ILICIH
Trigger: ATGGATACAAATCAGGATTCACTCAGACAGATGCTG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTCATTGTGATCGGTGTTaGTCTCCTCCTCATCATACA +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESHCDRC*SPPHHT
Trigger: TGTATGATGAGGAGGAGATCAACACCGATCACAATG...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTTGCTGAAGACAAAATaGCTCTCTTTGGATTTGGGA +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCLLKTK*LSLDLG
Trigger: TCCCAAATCCAAAGAGAGTCATTTTGTCTTCAGCAA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACATGAAATCATGCACGTaGCACCTAGAGAATGGGGCC +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDMKSCT*HLENGA
Trigger: GGCCCCATTCTCTAGGTGTCACGTGCATGATTTCAT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACCTTTGCCCTCCAACCTaGACATGTTTCTTCATGAGA +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNLCPPT*TCFFMR
Trigger: TCTCATGAAGAAACATGTTCAGGTTGGAGGGCAAAG...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTTTATATGAGGCGTGCTaGAGGAATTTCTCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESLYEAC*RNFSRR
Trigger: TCTCCTGGAGAAATTCCTTCAGCACGCCTCATATAA...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAGTGTCTCATTTCACTaGGAGTCCTTAAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESSVSFH*ESLRSL
Trigger: CAGAGACCTTAAGGACTCTCAGTGAAATGAGACACT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAACCAAAGTACAGATCTaGAGAGAAACTGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQTKVQI*RETEGS
Trigger: TGAACCCTCAGTTTCTCTTCAGATCTGTACTTTGGT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp ACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCAACCAGGTTTTCCTCCTCTTGGTCTaGGATGACATTACCCAGGTT +
Preference number: 4 (lower is better)
Translates to: TKPLIQATWESIFNFNQVFLLLV*DDITQV
Trigger: AACCTGGGTAATGTCATCTCAGACCAAGAGGAGGAA...AACCTGGTTGAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR GCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCCTGCTCCAAGGCCGTaGGAGTTAAATAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDPAPRP*ELNSLS
Trigger: ACTCAAGCTATTTAACTCGCACGGCCTTGGAGCAGG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAATTTGTTCTAAGTAAATaGAGGCTTAGTAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQFVLSK*RLSRPL
Trigger: GAGGGGCCTACTAAGCCTGCATTTACTTAGAACAAA...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCTTGGCTTAATAGAGTaGCAAGAAGCAGAGGATTGT +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVLGLIE*QEAEDC
Trigger: ACAATCCTCTGCTTCTTGCCACTCTATTAAGCCAAG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACTTGGCTTAATAGAGTaGCAAGAAGCAGAGGATTGT +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQLGLIE*QEAEDC
Trigger: ACAATCCTCTGCTTCTTGCCACTCTATTAAGCCAAG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTGTGTCGTTTCTTTGGTaGCCCAGAAATGAACATGGT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESVSFLW*PRNEHG
Trigger: ACCATGTTCATTTCTGGGCCACCAAAGAAACGACAC...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTCCACGCTCAGAAATTaGCTGCCGGTCAACCCTAAT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDSTLRN*LPVNPN
Trigger: ATTAGGGTTGACCGGCAGCCAATTTCTGAGCGTGGA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACGGGATAAGAGTTTTCTaGCAACTGTTAGCTGCGGTT +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNGIRVF*QLLAAV
Trigger: AACCGCAGCTAACAGTTGCCAGAAAACTCTTATCCC...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTACTTTTGTTTTTGCCTaGGGAGCTGATGAGGTCATC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESTFVFA*GADEVI
Trigger: GATGACCTCATCAGCTCCCCAGGCAAAAACAAAAGT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTATTTGGTCAGCATTATaGATACAGTTTCCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCIWSAL*IQFPVS
Trigger: GGAAACGGGAAACTGTATCCATAATGCTGACCAAAT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACAAAGGCCAGACACACTaGCGTTTAATGCCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDKGQTH*RLMPSS
Trigger: GGAGCTAGGCATTAAACGCCAGTGTGTCTGGCCTTT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGTACCACCACATAATCTaGCAGCCTTTGATAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVYHHII*QPLIVS
Trigger: AGACACTATCAAAGGCTGCCAGATTATGTGGTGGTA...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTTGATTCCACACCAATaGCATGAGTCTCATGTAACA +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCLIPHQ*HESHVT
Trigger: TGTTACATGAGACTCATGCCATTGGTGTGGAATCAA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAGGGGTGATGGTCTTTTaGCTTTATTCTGGCATATCT +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKGVMVF*LYSGIS
Trigger: AGATATGCCAGAATAAAGCCAAAAGACCATCACCCC...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCAACCAGCAGTTCACTaGAGACCCATCCATCTTGTA +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSQPAVH*RPIHLV
Trigger: TACAAGATGGATGGGTCTCCAGTGAACTGCTGGTTG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580732.6
CDS-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCAGTTGCCCAGCATATaGATTCCCCATGATCTACAC +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDQLPSI*IPHDLH
Trigger: GTGTAGATCATGGGGAATTCATATGCTGGGCAACTG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424526.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAAAATCCTTTCCTGCTTaGCAAAAACCATCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKKSFPA*QKPSVV
Trigger: CACTACAGATGGTTTTTGTCAAGCAGGAAAGGATTT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCACCCTGGGAGCTTCTaGCTAGGTAGTACTTTAAGT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDHPGSF*LGSTLS
Trigger: ACTTAAAGTACTACCTAGTCAGAAGCTCCCAGGGTG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTTCATACTGCACATTCTaGGTCAAGTCTGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSSYCTF*VKSVLR
Trigger: CCTCAACACAGACTTGACTCAGAATGTGCAGTATGA...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACACAGAAATACCTGTTaGAGTCATACTGCACATTCT +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKHRNTC*SHTAHS
Trigger: AGAATGTGCAGTATGACTTCAACAGGTATTTCTGTG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAAGGCAGGTCCTCTTTaGAGGACAATTAAAAATGGG +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESKAGPL*RTIKNG
Trigger: CCCATTTTTAATTGTCCTTCAAAGAGGACCTGCCTT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACAACAACATATTTTTCTaGTCTCTGATGGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNNNIFF*SLMGCP
Trigger: GGGACAGCCCATCAGAGAGCAGAAAAATATGTTGTT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTACTGGCTCACTTCACTaGTTTCATTGTGATCGGTGT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSTGSLH*FHCDRC
Trigger: ACACCGATCACAATGAAAGCAGTGAAGTGAGCCAGT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACGGTGTGGCTTCAATGTaGTGCAAGACAGTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDGVASM*CKTVFK
Trigger: CTTGAAGACTGTCTTGCAGCACATTGAAGCCACACC...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCTGTATGCCCAAGATTaGATAGTGGACAATTTTTGG +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVLYAQD*IVDNFW
Trigger: CCAAAAATTGTCCACTATGCAATCTTGGGCATACAG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTTTAAGGTCTCTGAAATaGCCTCCGCCAAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSLRSLK*PPPKSS
Trigger: AGAACTCTTTGGCGGAGGGCATTTCAGAGACCTTAA...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTCCTCTGATTTTCGATaGACAAATTACCACCACATA +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCSSDFR*TNYHHI
Trigger: TATGTGGTGGTAATTTGTGCATCGAAAATCAGAGGA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTATCTGTAGAAACATATaGCTCCCATTGCCGATACTG +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESICRNI*LPLPIL
Trigger: CAGTATCGGCAATGGGAGGCATATGTTTCTACAGAT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCAGGAGGAATCCTGCTaGGATGTCAATTTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSQEESC*DVNLFH
Trigger: ATGGAACAAATTGACATCCCAGCAGGATTCCTCCTG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TTACTAGGAACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCATAGCAGCAGCCTCCTaGGGTGACACACATTCATTA +
Preference number: 4 (lower is better)
Translates to: LLGTKPLIQATWESIFNFIAAAS*GDTHSL
Trigger: TAATGAATGTGTGTCACCCCAGGAGGCTGCTGCTAT...GAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGTTCCTAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAATAGTGGACAATTTTTaGTGTGGCTTCAATGTGCTG +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKIVDNF*CGFNVL
Trigger: CAGCACATTGAAGCCACACCAAAAATTGTCCACTAT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAAGTTATGGATGGCTTTaGGGAAGAGTTTATATGAGG +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQSYGWL*GRVYMR
Trigger: CCTCATATAAACTCTTCCCCAAAGCCATCCATAACT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACGCATATGGCCACCTCTaGTCCAATGTTAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDAYGHL*SNVKVA
Trigger: TGCTACCTTAACATTGGACCAGAGGTGGCCATATGC...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTAAGCGGACAATTGTTTaGCGCAAGGAACTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSKRTIV*RKELLS
Trigger: AGACAGAAGTTCCTTGCGCCAAACAATTGTCCGCTT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACGACCTGGATCAGATTTaGGGAGTTCTTTGGAGAATT +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNDLDQI*GVLWRI
Trigger: AATTCTCCAAAGAACTCCCCAAATCTGATCCAGGTC...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCTTTTGGCTTTATTCTaGCATATCTCTTCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCLLALF*HISSRV
Trigger: AACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR CAA 72 bp AAACTGAGGGTTCAGGCCTCAAACGTTAATCTTCAATaGATTCCACACCAATGGCATGAGTCTCATGTAACA +
Preference number: 4 (lower is better)
Translates to: KLRVQASNVNLQ*IPHQWHESHVT
Trigger: TGTTACATGAGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAACCCTCAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTTTTGAATCACAGTCATaGTTAAGTTGGGCAGTCAAC +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESFESQS*LSWAVN
Trigger: GTTGACTGCCCAACTTAATCATGACTGTGATTCAAA...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACAATTGGTGGGCTGTTTaGATCAGACATTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNNWWAV*IRHFFI
Trigger: GATGAAGAAATGTCTGATTCAAACAGCCCACCAATT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAGGTTGGAAAATTCCGTaGAATATCGAAATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKGWKIP*NIEILF
Trigger: AAAGAGGATTTCGATATTTCACGGAATTTTCCAACC...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTTCTGCTTCTTTGGCTaGGTGGTGAGCTTCAAGTTA +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDFCFFG*VVSFKL
Trigger: TAACTTGAAGCTCACCACTCAGCCAAAGAAGCAGAA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTTTAGCAGCATCTGTCTaGGTGAATCCTGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESLAASV*VNPDLY
Trigger: ATACAAATCAGGATTCACTCAGACAGATGCTGCTAA...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp ACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCAACCAGGTTTGTGGTTTTGAAATGTaGTGCCAGGAAACTGACCTT +
Preference number: 4 (lower is better)
Translates to: TKPLIQATWESIFNFNQVCGFEM*CQETDL
Trigger: AAGGTCAGTTTCCTGGCATCACATTTCAAAACCACA...AACCTGGTTGAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR TCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAACTTCAAACTTGGTTTaGATCTCATTGTCTAGACGA +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQTSNLV*ISLSRR
Trigger: TCGTCTAGACAATGAGATTCAAACCAAGTTTGAAGT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACTCCAATTCTAGGTTGTaGTATGATAGCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNSNSRL*YDSSLM
Trigger: CATCAAGGAGCTATCATATCACAACCTAGAATTGGA...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TTACTAGGAACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCAGTGTCTCATTTCACTaGGAGTCCTTAAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LLGTKPLIQATWESIFNFSVSFH*ESLRSL
Trigger: CAGAGACCTTAAGGACTCTCAGTGAAATGAGACACT...GAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGTTCCTAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR TCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACACTTTGCTCCACAGTaGTTGTACTTTAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKHFAPQ*LYFKGK
Trigger: TTTTCCTTTAAAGTACAATCACTGTGGAGCAAAGTG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTACCAAAGTACAGATCTaGAGAGAAACTGAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSTKVQI*RETEGS
Trigger: TGAACCCTCAGTTTCTCTTCAGATCTGTACTTTGGT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGATCATTTCAAACCCCTaGGTAATACTGTACCAAAGT +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVIISNP*VILYQS
Trigger: ACTTTGGTACAGTATTACTCAGGGGTTTGAAATGAT...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp ACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCAACCAGGTTTTGTGGTCTGTGACTTaGAGAATCCTCAAAACCCTT +
Preference number: 4 (lower is better)
Translates to: TKPLIQATWESIFNFNQVLWSVT*RILKTL
Trigger: AAGGGTTTTGAGGATTCTTCAAGTCACAGACCACAA...AACCTGGTTGAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR TCA 90 bp TTACTAGGAACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCGGCTGTTGTGGTCTGTaGCTTGAAGAATCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LLGTKPLIQATWESIFNFGCCGL*LEESSK
Trigger: TTTTGAGGATTCTTCAAGTCACAGACCACAACAGCC...GAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGTTCCTAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR GCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACTTCAGGGAGTCTGTTaGCTAGATTTTAACTTGTTT +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKLQGVC*LDFNLF
Trigger: AAACAAGTTAAAATCTAGGCAACAGACTCCCTGAAG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCGCTCAGAAATTGGCTaGCGGTCAACCCTAATTTTT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDRSEIG*RSTLIF
Trigger: AAAAATTAGGGTTGACCGGCAGCCAATTTCTGAGCG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACTCCAAGAGGATCTTTaGCAGTTAATATCACAATAC +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKLQEDL*QLISQY
Trigger: GTATTGTGATATTAACTGGCAAAGATCCTCTTGGAG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACACTGGCTCACTTCACTaGTTTCATTGTGATCGGTGT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDTGSLH*FHCDRC
Trigger: ACACCGATCACAATGAAAGCAGTGAAGTGAGCCAGT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTCTGAGAAGTCAGCTTaGTGCTCCATTTCTGTATGC +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDSEKSA*CSISVC
Trigger: GCATACAGAAATGGAGCAGCAAGCTGACTTCTCAGA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGGCTTTCAGCATAATTTaGTCAAATTCTTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLSMAQFPNSAISVALSVAFSII*SNSSLR
Trigger: TCTCAGGGAAGAATTTGAGCAAATTATGCTGAAAGC...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTACTAGGAACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCTTAAGGTCTCTGAAATaGCCTCCGCCAAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLGTKPLIQATWESIFNFLRSLK*PPPKSS
Trigger: AGAACTCTTTGGCGGAGGGCATTTCAGAGACCTTAA...GAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGTTCCTAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR GCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTAAATATGTTGCACTTTaGTCCACAGTGATTGTACTT +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCKYVAL*STVIVL
Trigger: AAGTACAATCACTGTGGAGCAAAGTGCAACATATTT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTTTGCTGGTGCCAACTaGTTAATTCCAACCAAACGG +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDFAGAN*LIPTKR
Trigger: CCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAAATCATGGTGTCCTGTaGTTGTGCAATTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQNHGVL*LCNFIL
Trigger: AAGGATAAAATTGCACAAGCACAGGACACCATGATT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTAGCTTCAAGTTAATGTaGTTGGAAAATTCCGTGAAA +
Preference number: 4 (lower is better)
Translates to: CELSYMLRFSRSTGELLCSFKLM*LENSVK
Trigger: TTTCACGGAATTTTCCAACCACATTAACTTGAAGCT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAATGGGCTCTTCAACTTTaGATTCCTTTATCACTTCTT +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQWALQL*IPLSLL
Trigger: AAGAAGTGATAAAGGAATCCAAAGTTGAAGAGCCCA...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAATATAGGCTGCATATTTaGTCAGCATTATGGATACAG +
Preference number: 4 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQYRLHI*SALWIQ
Trigger: CTGTATCCATAATGCTGACCAAATATGCAGCCTATA...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTAGGACACATTCTTACTaGAAACTCCTACTTCCATGG +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSRTHSY*KLLLPW
Trigger: CCATGGAAGTAGGAGTTTCCAGTAAGAATGTGTCCT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAGTTATGGATGGCTTTaGGGAAGAGTTTATATGAGG +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESSYGWL*GRVYMR
Trigger: CCTCATATAAACTCTTCCCCAAAGCCATCCATAACT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp ACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCAACCAGGTTTACCACCACATAATCTaGCAGCCTTTGATAGTGTCT +
Preference number: 4 (lower is better)
Translates to: TKPLIQATWESIFNFNQVYHHII*QPLIVS
Trigger: AGACACTATCAAAGGCTGCCAGATTATGTGGTGGTA...AACCTGGTTGAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTAATTGGTGGGCTGTTTaGATCAGACATTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSNWWAV*IRHFFI
Trigger: GATGAAGAAATGTCTGATTCAAACAGCCCACCAATT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACACTTCAAACTTGGTTTaGATCTCATTGTCTAGACGA +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNTSNLV*ISLSRR
Trigger: TCGTCTAGACAATGAGATTCAAACCAAGTTTGAAGT...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTTCCAATTCTAGGTTGTaGTATGATAGCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSSNSRL*YDSSLM
Trigger: CATCAAGGAGCTATCATATCACAACCTAGAATTGGA...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCACAGAAATACCTGTTaGAGTCATACTGCACATTCT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSHRNTC*SHTAHS
Trigger: AGAATGTGCAGTATGACTTCAACAGGTATTTCTGTG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTCTTCAGGGAGTCTGTTaGCTAGATTTTAACTTGTTT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESLQGVC*LDFNLF
Trigger: AAACAAGTTAAAATCTAGGCAACAGACTCCCTGAAG...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAAGAAATAGGGTAAAGTaGCATAGCCTATCAGAATTA +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKRNRVK*HSLSEL
Trigger: TAATTCTGATAGGCTATGGCACTTTACCCTATTTCT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTTCCTCTGATTTTCGATaGACAAATTACCACCACATA +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESSSDFR*TNYHHI
Trigger: TATGTGGTGGTAATTTGTGCATCGAAAATCAGAGGA...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTGGTGTCCTGTGCTTGTaGAATTTTATCCTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESGVLCL*NFILKE
Trigger: TTCTTTAAGGATAAAATTGCACAAGCACAGGACACC...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTCTTATTTTCACCATTTaGTTCAACCAGCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: VQASNVNLQLIPHQWHESLIFTI*FNQQFT
Trigger: AGTGAACTGCTGGTTGAAGCAAATGGTGAAAATAAG...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580732.6
CDS-3UTR GCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCATCTGATCCATCTTTaGTCTCTTCCTCTATTGCTC +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDHLIHL*SLPLLL
Trigger: GAGCAATAGAGGAAGAGAGCAAAGATGGATCAGATG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580732.6
CDS-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAAGCTTCAAGTTAATGTaGTTGGAAAATTCCGTGAAA +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKSFKLM*LENSVK
Trigger: TTTCACGGAATTTTCCAACCACATTAACTTGAAGCT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAATTTGTTTTCCAACTGTaGAATCTTGTAGCAATTCAC +
Preference number: 4 (lower is better)
Translates to: PPIADTGQTPPADFNESKFVFQL*NLVAIH
Trigger: GTGAATTGCTACAAGATTCCACAGTTGGAAAACAAA...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACAGTACTTCAAAGACCTaGGAAAGGTTTCTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDSTSKT*ERFLQE
Trigger: CTCTTGGAGAAACCTTTCCCAGGTCTTTGAAGTACT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTACCACCACATAATCTaGCAGCCTTTGATAGTGTCT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDYHHII*QPLIVS
Trigger: AGACACTATCAAAGGCTGCCAGATTATGTGGTGGTA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACGGGGTGATGGTCTTTTaGCTTTATTCTGGCATATCT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDGVMVF*LYSGIS
Trigger: AGATATGCCAGAATAAAGCCAAAAGACCATCACCCC...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTTTGAATCACAGTCATaGTTAAGTTGGGCAGTCAAC +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDFESQS*LSWAVN
Trigger: GTTGACTGCCCAACTTAATCATGACTGTGATTCAAA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTGGTTGGAAAATTCCGTaGAATATCGAAATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSGWKIP*NIEILF
Trigger: AAAGAGGATTTCGATATTTCACGGAATTTTCCAACC...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTTGTCTGAGTGAATCCTaGTTTGTATCCATTAGTTGT +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSCLSES*FVSISC
Trigger: ACAACTAATGGATACAAATCAGGATTCACTCAGACA...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTTAGCAGCATCTGTCTaGGTGAATCCTGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDLAASV*VNPDLY
Trigger: ATACAAATCAGGATTCACTCAGACAGATGCTGCTAA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CCA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACTTTGTTTTCCAACTGTaGAATCTTGTAGCAATTCAC +
Preference number: 4 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNFVFQL*NLVAIH
Trigger: GTGAATTGCTACAAGATTCCACAGTTGGAAAACAAA...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
3UTR CAA 72 bp GCAGATCAATTTCTCCATTATAGGGGTGATGGTCTTTaGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: ADQFLHYRGDGL*ALFWHISSRVK
Trigger: TTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCCTATAATGGAGAAATTGATCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR TCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACATCATTTCAAACCCCTaGGTAATACTGTACCAAAGT +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDIISNP*VILYQS
Trigger: ACTTTGGTACAGTATTACTCAGGGGTTTGAAATGAT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTAGAAATAGGGTAAAGTaGCATAGCCTATCAGAATTA +
Preference number: 4 (lower is better)
Translates to: GVMVFWLYSGISLPELNSRNRVK*HSLSEL
Trigger: TAATTCTGATAGGCTATGGCACTTTACCCTATTTCT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCTCCAAGAGGATCTTTaGCAGTTAATATCACAATAC +
Preference number: 4 (lower is better)
Translates to: YTQIMVSCACAILSLKKDLQEDL*QLISQY
Trigger: GTATTGTGATATTAACTGGCAAAGATCCTCTTGGAG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR GCA 90 bp TTACTAGGAACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCTCCTCTGATTTTCGATaGACAAATTACCACCACATA +
Preference number: 4 (lower is better)
Translates to: LLGTKPLIQATWESIFNFSSDFR*TNYHHI
Trigger: TATGTGGTGGTAATTTGTGCATCGAAAATCAGAGGA...GAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGTTCCTAGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581327.1
3UTR CAA 72 bp TTTCATTCCAGAAGACTTTTACTAGGAACAAAGCCTTaGATCCAGGCCACATGGGAAAGCATTTTTAATTTC +
Preference number: 4 (lower is better)
Translates to: FHSRRLLLGTKP*IQATWESIFNF
Trigger: GAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGTTCCTAGTAAAAGTCTTCTGGAATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581327.1
3UTR CAA 72 bp AAATGTTATTGGAATATTGCACAGACAGTGGGTTTCTaGGTATTATTTGCATTAGGCCCTTTCAACAAAACA +
Preference number: 4 (lower is better)
Translates to: KCYWNIAQTVGF*VLFALGPFNKT
Trigger: TGTTTTGTTGAAAGGGCCTAATGCAAATAATACCAAGAAACCCACTGTCTGTGCAATATTCCAATAACATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS TCA 90 bp GGATCACCACTGGTGGCAGGGCTGCCTGTGGGCCCCGGCAGCCTCTaGTGGGCTGTCCCGGCCATGGGAGGGTCCTGGGTCCTGAGGATG +
Preference number: 5 (lower is better)
Translates to: GSPLVAGLPVGPGSL*WAVPAMGGSWVLRM
Trigger: CATCCTCAGGACCCAGGACCCTCCCATGGCCGGGACAGCCCATCAGAGGCTGCCGGGGCCCACAGGCAGCCCTGCCACCAGTGGTGATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS GCA 90 bp GTCGGGGGTGGAAGTTTCGGGTGCCAGAGGCCGGGTCCAGCTGGTTaGTATAGTCAGCGTGGTGCTGCCGGGCCAAGGTCCACTGCCTGT +
Preference number: 5 (lower is better)
Translates to: VGGGSFGCQRPGPAG*YSQRGAAGPRSTAC
Trigger: ACAGGCAGTGGACCTTGGCCCGGCAGCACCACGCTGACTATAGCAACCAGCTGGACCCGGCCTCTGGCACCCGAAACTTCCACCCCCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CCA 90 bp CCGGCCATGGGAGGGTCCTGGGTCCTGAGGATGATGATGACGGCTTaGAGGTGGTGCTGCTCGCCATCTGGGGGCCCAGGGAGTCACATT +
Preference number: 5 (lower is better)
Translates to: PAMGGSWVLRMMMTA*RWCCSPSGGPGSHI
Trigger: AATGTGACTCCCTGGGCCCCCAGATGGCGAGCAGCACCACCTCCAAGCCGTCATCATCATCCTCAGGACCCAGGACCCTCCCATGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CCA 90 bp GTAGTAGAGGGACTGCTCCTCACTGCTCATGTCCTTGTTCAGGAGTaGCCGCAGGGAGCTCACCCAGGCCACGTCGGCGTGGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: VVEGLLLTAHVLVQE*PQGAHPGHVGVGQQ
Trigger: CTGCTGCCCCACGCCGACGTGGCCTGGGTGAGCTCCCTGCGGCCACTCCTGAACAAGGACATGAGCAGTGAGGAGCAGTCCCTCTACTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS GCA 90 bp GGGTCCTGGGTCCTGAGGATGATGATGACGGCTTGGAGGTGGTGCTaGTCGCCATCTGGGGGCCCAGGGAGTCACATTCCTGCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: GSWVLRMMMTAWRWC*SPSGGPGSHIPASE
Trigger: CTCTGAAGCAGGAATGTGACTCCCTGGGCCCCCAGATGGCGAGCAGCACCACCTCCAAGCCGTCATCATCATCCTCAGGACCCAGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CCA 90 bp CCTGAGGATGATGATGACGGCTTGGAGGTGGTGCTGCTCGCCATCTaGGGGCCCAGGGAGTCACATTCCTGCTTCAGAGTCTCCCCGGCT +
Preference number: 5 (lower is better)
Translates to: PEDDDDGLEVVLLAI*GPRESHSCFRVSPA
Trigger: AGCCGGGGAGACTCTGAAGCAGGAATGTGACTCCCTGGGCCCCCAGATGGCGAGCAGCACCACCTCCAAGCCGTCATCATCATCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CCA 90 bp ATGGGAGGGTCCTGGGTCCTGAGGATGATGATGACGGCTTGGAGGTaGTGCTGCTCGCCATCTGGGGGCCCAGGGAGTCACATTCCTGCT +
Preference number: 5 (lower is better)
Translates to: MGGSWVLRMMMTAWR*CCSPSGGPGSHIPA
Trigger: AGCAGGAATGTGACTCCCTGGGCCCCCAGATGGCGAGCAGCACCACCTCCAAGCCGTCATCATCATCCTCAGGACCCAGGACCCTCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS GCA 90 bp TTGTCGCGCACCTCCTGTAGCCGCTCCTTGGCTAACATCGCCAGCTaGACCGAGGGCACCCTGATAATGAGCATGTGTCCCCTCCCACTT +
Preference number: 5 (lower is better)
Translates to: LSRTSCSRSLANIAS*TEGTLIMSMCPLPL
Trigger: AAGTGGGAGGGGACACATGCTCATTATCAGGGTGCCCTCGGTGCAGCTGGCGATGTTAGCCAAGGAGCGGCTACAGGAGGTGCGCGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS GCA 90 bp CTGAGTTCGGTGGCCGGGTTCCCAAGGATGATCTCAAACCGATACTaGAGACCCAGTTTGTCGCGCACCTCCTGTAGCCGCTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LSSVAGFPRMISNRY*RPSLSRTSCSRSLA
Trigger: AGCCAAGGAGCGGCTACAGGAGGTGCGCGACAAACTGGGTCTGCAGTATCGGTTTGAGATCATCCTTGGGAACCCGGCCACCGAACTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CCA 90 bp GTGCTAGATGGCCAAGAATCCACCTATGCAAATGAGGCCTGCAGGTaGGAGGAGTTCAGGTGGCACAGACGCCATCAACCCATGCAGGGC +
Preference number: 5 (lower is better)
Translates to: VLDGQESTYANEACR*EEFRWHRRHQPMQG
Trigger: GCCCTGCATGGGTTGATGGCGTCTGTGCCACCTGAACTCCTCCCACCTGCAGGCCTCATTTGCATAGGTGGATTCTTGGCCATCTAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584446.5
CDS TCA 90 bp GTCATCCATAATGCTGAGTGTTTCTGGTGTGCTGTGGTCGCGGAGTaGCGCCATGGTGGTGAGAGCCATCAGGGCCTCAGAGTACTGCTG +
Preference number: 5 (lower is better)
Translates to: VIHNAECFWCAVVAE*RHGGESHQGLRVLL
Trigger: CAGCAGTACTCTGAGGCCCTGATGGCTCTCACCACCATGGCGTCACTCCGCGACCACAGCACACCAGAAACACTCAGCATTATGGATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578383.1
ENST00000578955.1
ENST00000580732.6
CDS CCA 90 bp GAGCTGATGAGGTCATCCATAATGCTGAGTGTTTCTGGTGTGCTGTaGTCGCGGAGTGACGCCATGGTGGTGAGAGCCATCAGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: ELMRSSIMLSVSGVL*SRSDAMVVRAIRAS
Trigger: TGAGGCCCTGATGGCTCTCACCACCATGGCGTCACTCCGCGACCACAGCACACCAGAAACACTCAGCATTATGGATGACCTCATCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578383.1
ENST00000578955.1
ENST00000580732.6
CDS CCA 90 bp CTTGAAAGAGGGCGAACTGTAGGGACAGGTACAACTAAGCCAGGTTaGGGGAGAGGTGACCCAGGATACCATCCCCGGTGTCGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LERGRTVGTGTTKPG*GRGDPGYHPRCRFF
Trigger: AAAGAAACGACACCGGGGATGGTATCCTGGGTCACCTCTCCCCCAACCTGGCTTAGTTGTACCTGTCCCTACAGTTCGCCCTCTTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000579454.1
ENST00000580732.6
ENST00000584446.5
CDS-3UTR CAA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCATGTGTTCAGGCAGATaGGGAGACTTGGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCMCSGR*GDLAPT
Trigger: GGTGGGGGCCAAGTCTCCCAATCTGCCTGAACACAT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCATCACTGCTCATGTCCTaGTTCAGGAGTGGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPSLLMS*FRSGRR
Trigger: CCTGCGGCCACTCCTGAACAAGGACATGAGCAGTGA...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS TCA 90 bp ACCTCCGATCTGGGAACAATGATGATGAAGTCTACTTTGCTGAAGTaGCCGAGGTCCAGGCTCTGGCTGCCACTGTCCGCTATAGCACAC +
Preference number: 5 (lower is better)
Translates to: TSDLGTMMMKSTLLK*PRSRLWLPLSAIAH
Trigger: GTGTGCTATAGCGGACAGTGGCAGCCAGAGCCTGGACCTCGGTCACTTCAGCAAAGTAGACTTCATCATCATTGTTCCCAGATCGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000578955.1
ENST00000580732.6
ENST00000584446.5
CDS GCA 90 bp AGGTGGCTGATGCCCTCCATGGCGTGGAAAAGGTTTAGGAGTCCGTaGTCATGTCGACCACTGGAAGGAGTGAAAATAGGGCTCTTGACT +
Preference number: 5 (lower is better)
Translates to: RWLMPSMAWKRFRSP*SCRPLEGVKIGLLT
Trigger: AGTCAAGAGCCCTATTTTCACTCCTTCCAGTGGTCGACATGAGCACGGACTCCTAAACCTTTTCCACGCCATGGAGGGCATCAGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS GCA 90 bp GTTAATGTGCTAGATGGCCAAGAATCCACCTATGCAAATGAGGCCTaGAGGTGGGAGGAGTTCAGGTGGCACAGACGCCATCAACCCATG +
Preference number: 5 (lower is better)
Translates to: VNVLDGQESTYANEA*RWEEFRWHRRHQPM
Trigger: CATGGGTTGATGGCGTCTGTGCCACCTGAACTCCTCCCACCTGCAGGCCTCATTTGCATAGGTGGATTCTTGGCCATCTAGCACATTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584446.5
CDS CCA 90 bp GAAATCGCTTGTCCACAGCACAAACTAGGATGTGTTCAGGCAGATTaGGAGACTTGGCCCCCACCAGGAGGAATCCTGCTGGGATGTCAA +
Preference number: 5 (lower is better)
Translates to: EIACPQHKLGCVQAD*ETWPPPGGILLGCQ
Trigger: TTGACATCCCAGCAGGATTCCTCCTGGTGGGGGCCAAGTCTCCCAATCTGCCTGAACACATCCTAGTTTGTGCTGTGGACAAGCGATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS-3UTR CAA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGCTAATGCGGGACTGTaGGGTCTGCAGAGTGTATGG +
Preference number: 5 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPANAGL*GLQSVW
Trigger: CCATACACTCTGCAGACCCAACAGTCCCGCATTAGC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTGTGACAGCGCTGCTGTaGCTCTGGGGCCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VQASNVNLQLIPHQWHESVTALL*LWGRSR
Trigger: CCTGGAGCGGCCCCAGAGCAACAGCAGCGCTGTCAC...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACGTGACAGCGCTGCTGTaGCTCTGGGGCCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNVTALL*LWGRSR
Trigger: CCTGGAGCGGCCCCAGAGCAACAGCAGCGCTGTCAC...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGACTGCTTCTGGGACTaGTCAGCTGTGCTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPDCFWD*SAVLEE
Trigger: CTCTTCCAGCACAGCTGACAAGTCCCAGAAGCAGTC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGATCACTGCTCATGTCCTaGTTCAGGAGTGGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGSLLMS*FRSGRR
Trigger: CCTGCGGCCACTCCTGAACAAGGACATGAGCAGTGA...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCTGGTTGGGCCAGTACTaGCGGTACAGAGGCATCTCA +
Preference number: 5 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCWLGQY*RYRGIS
Trigger: TGAGATGCCTCTGTACCGCAAGTACTGGCCCAACCA...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCATGGTTGGGCCAGTACTaGCGGTACAGAGGCATCTCA +
Preference number: 5 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPWLGQY*RYRGIS
Trigger: TGAGATGCCTCTGTACCGCAAGTACTGGCCCAACCA...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS TCA 90 bp TACTTGCGGTACAGAGGCATCTCATACTCTTTGACCACCAGGAGGTaGAGGTGGCTGATGCCCTCCATGGCGTGGAAAAGGTTTAGGAGT +
Preference number: 5 (lower is better)
Translates to: YLRYRGISYSLTTRR*RWLMPSMAWKRFRS
Trigger: ACTCCTAAACCTTTTCCACGCCATGGAGGGCATCAGCCACCTTCACCTCCTGGTGGTCAAAGAGTATGAGATGCCTCTGTACCGCAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS TCA 90 bp GGGGCTGCCAGTAGTGTGTGTTCACTGTCGGGAGCACAGATGTATTaGAGGGGCAAGATGGGTGCTAAGCTCTCTGACACCATGATCTTT +
Preference number: 5 (lower is better)
Translates to: GAASSVCSLSGAQMY*RGKMGAKLSDTMIF
Trigger: AAAGATCATGGTGTCAGAGAGCTTAGCACCCATCTTGCCCCTTCAATACATCTGTGCTCCCGACAGTGAACACACACTACTGGCAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTCCTGTAGCCGCTCCTaGGCTAACATCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCSCSRS*ANIASC
Trigger: GCAGCTGGCGATGTTAGCCAAGGAGCGGCTACAGGA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGACTGCTTCTGGGACTaGTCAGCTGTGCTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGDCFWD*SAVLEE
Trigger: CTCTTCCAGCACAGCTGACAAGTCCCAGAAGCAGTC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTGATGATGATGACGGCTaGGAGGTGGTGCTGCTCGCC +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCDDDDG*EVVLLA
Trigger: GGCGAGCAGCACCACCTCCAAGCCGTCATCATCATC...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS TCA 90 bp AGGCATTTTACTGAAGCTCTCGATGTCAGGCCAGGGCTCTCCCTCTaGCTGGCTCACTTCACTGCTTTCATTGTGATCGGTGTTGATCTC +
Preference number: 5 (lower is better)
Translates to: RHFTEALDVRPGLSL*LAHFTAFIVIGVDL
Trigger: GAGATCAACACCGATCACAATGAAAGCAGTGAAGTGAGCCAGTCAGAGGGAGAGCCCTGGCCTGACATCGAGAGCTTCAGTAAAATGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS TCA 90 bp AATCTAGCAAGCCAGGGGAGTTGTCCTGGTGACACAGGGACACACTaGGCACCTATCTGCAGGGCTCTTTCTCTCAGAGTAAATTCTTGC +
Preference number: 5 (lower is better)
Translates to: NLASQGSCPGDTGTH*APICRALSLRVNSC
Trigger: GCAAGAATTTACTCTGAGAGAAAGAGCCCTGCAGATAGGTGCTCAGTGTGTCCCTGTGTCACCAGGACAACTCCCCTGGCTTGCTAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS GCA 90 bp TCAAAAGTCTCGTCACATCTCAGAAGTGGGCTCGTGATCCCCCACTaGAGAGACTTGCTGTACTCACTCAAGCCAAAGTACAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SKVSSHLRSGLVIPH*RDLLYSLKPKYSFS
Trigger: GGAGAAGCTGTACTTTGGCTTGAGTGAGTACAGCAAGTCTCTGCAGTGGGGGATCACGAGCCCACTTCTGAGATGTGACGAGACTTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578383.1
ENST00000578955.1
ENST00000580732.6
CDS-3UTR CAA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCTCCAGATCCTCCACCTaGGGTTTGACATCTGCAGAT +
Preference number: 5 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCSRSST*GLTSAD
Trigger: ATCTGCAGATGTCAAACCCAAGGTGGAGGATCTGGA...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAGGCAGATTGGGAGACTaGGCCCCCACCAGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: PPIADTGQTPPADFNESKGRLGD*APTRRN
Trigger: ATTCCTCCTGGTGGGGGCCAAGTCTCCCAATCTGCC...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAGATGATGATGACGGCTaGGAGGTGGTGCTGCTCGCC +
Preference number: 5 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQDDDDG*EVVLLA
Trigger: GGCGAGCAGCACCACCTCCAAGCCGTCATCATCATC...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCAACAGTGTTTCCTTGTaGTCTGTCCCCTCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCNSVSL*SVPSAD
Trigger: GTCTGCAGAGGGGACAGACAACAAGGAAACACTGTT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580732.6
CDS TCA 90 bp CAGGTGGCACAGACGCCATCAACCCATGCAGGGCCATCCTCGCCTTaGGAAAATTTCTCTTCATCCATAAATGACCAGATTCTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: QVAQTPSTHAGPSSP*ENFSSSINDQILVP
Trigger: TGGGACTAGAATCTGGTCATTTATGGATGAAGAGAAATTTTCTCAAGGCGAGGATGGCCCTGCATGGGTTGATGGCGTCTGTGCCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584446.5
CDS-3UTR CAA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGAGGCTTCTATGGAGTaGTGGAGAGCTTCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCEASME*WRASSN
Trigger: ATTTGAGGAAGCTCTCCACAACTCCATAGAAGCCTC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGATCCAGATCCTCCACCTaGGGTTTGACATCTGCAGAT +
Preference number: 5 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGSRSST*GLTSAD
Trigger: ATCTGCAGATGTCAAACCCAAGGTGGAGGATCTGGA...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTGGGAGCACAGATGTATaGAAGGGGCAAGATGGGTGC +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCGSTDV*KGQDGC
Trigger: GCACCCATCTTGCCCCTTCAATACATCTGTGCTCCC...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS TCA 90 bp CTGAAGTTATGGATGGCTTTGGGGAAGAGTTTATATGAGGCGTGCTaGAGGAATTTCTCCAGGAGAAACTGTGCAGGGGCTGCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: LKLWMALGKSLYEAC*RNFSRRNCAGAASS
Trigger: ACTACTGGCAGCCCCTGCACAGTTTCTCCTGGAGAAATTCCTTCAGCACGCCTCATATAAACTCTTCCCCAAAGCCATCCATAACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580732.6
CDS TCA 90 bp AAGAGTGGTGAGGAGGGCAGGACAATTTCTAGAGGCAGGGGAATCTaGAAGTTTCATGCCAGGGGAATGGAGCTCAGTTTATCTTCGAAG +
Preference number: 5 (lower is better)
Translates to: KSGEEGRTISRGRGI*KFHARGMELSLSSK
Trigger: CTTCGAAGATAAACTGAGCTCCATTCCCCTGGCATGAAACTTTCAGATTCCCCTGCCTCTAGAAATTGTCCTGCCCTCCTCACCACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578955.1
CDS GCA 90 bp ATAACTAATTTCTTTCAAAAACTCACTTGTGGTGAGCATGCTCTCTaGCAGAGCTCGGGACTGGTGCTGACCCAGCCGCACAAGATACTG +
Preference number: 5 (lower is better)
Translates to: ITNFFQKLTCGEHAL*QSSGLVLTQPHKIL
Trigger: CAGTATCTTGTGCGGCTGGGTCAGCACCAGTCCCGAGCTCTGGCAGAGAGCATGCTCACCACAAGTGAGTTTTTGAAAGAAATTAGTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269218.10
CDS CCA 90 bp CGTGGTACCACACTACTACATCTGAGGGAGGCTTCTATGGAGTTGTaGAGAGCTTCCTCAAATCGAGCAGATTTCAGTTGCCCAGCATAT +
Preference number: 5 (lower is better)
Translates to: RGTTLLHLREASMEL*RASSNRADFSCPAY
Trigger: ATATGCTGGGCAACTGAAATCTGCTCGATTTGAGGAAGCTCTCCACAACTCCATAGAAGCCTCCCTCAGATGTAGTAGTGTGGTACCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS CCA 90 bp TCTGGGGTCACAGTTGACGACACTGAAGAGCTTGGCTTAATAGAGTaGCAAGAAGCAGAGGATTGTCGGCTTCTACATTCTTTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: SGVTVDDTEELGLIE*QEAEDCRLLHSFQQ
Trigger: CTGCTGGAAAGAATGTAGAAGCCGACAATCCTCTGCTTCTTGCCACTCTATTAAGCCAAGCTCTTCAGTGTCGTCAACTGTGACCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000579454.1
ENST00000580732.6
ENST00000584446.5
CDS CCA 90 bp TCACTCAAGCCAAAGTACAGCTTCTCCTCGCAGCCCACGTCCTCCTaGTTCAAAATACAGAGCAAAAACCCAATGAGGACAGGATACAGT +
Preference number: 5 (lower is better)
Translates to: SLKPKYSFSSQPTSS*FKIQSKNPMRTGYS
Trigger: ACTGTATCCTGTCCTCATTGGGTTTTTGCTCTGTATTTTGAACCAGGAGGACGTGGGCTGCGAGGAGAAGCTGTACTTTGGCTTGAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578383.1
CDS-3UTR CAA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCACAGTCATGATTAAGTaGGGCAGTCAACACTTCAGG +
Preference number: 5 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCTVMIK*GSQHFR
Trigger: CCTGAAGTGTTGACTGCCCAACTTAATCATGACTGT...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTGGCAGATTGGGAGACTaGGCCCCCACCAGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSGRLGD*APTRRN
Trigger: ATTCCTCCTGGTGGGGGCCAAGTCTCCCAATCTGCC...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAGCAAGAAGCAGAGGATaGTCGGCTTCTACATTCTTT +
Preference number: 5 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPARSRG*SASTFF
Trigger: AAAGAATGTAGAAGCCGACAATCCTCTGCTTCTTGC...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCCCCACTGCAGAGACTaGCTGTACTCACTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: SLSMAQFPNSAISVALSVPHCRD*LYSLKP
Trigger: TGGCTTGAGTGAGTACAGCAAGTCTCTGCAGTGGGG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTTACTGCAGACCCAGTTaGTCGCGCACCTCCTGTAGC +
Preference number: 5 (lower is better)
Translates to: VQASNVNLQLIPHQWHESYCRPS*SRTSCS
Trigger: GCTACAGGAGGTGCGCGACAAACTGGGTCTGCAGTA...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAACTGCATTCAAATTCTaGTCTGAAACCAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGTAFKF*SETRGS
Trigger: GCTGCCCCTGGTTTCAGACAAGAATTTGAATGCAGT...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACCCCACGCCTGCATTATaGAACATGCCGGGAAGCACC +
Preference number: 5 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNPTPAL*NMPGST
Trigger: GGTGCTTCCCGGCATGTTCAATAATGCAGGCGTGGG...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCCTTCACAGTTGACATaGCTGGAGTGGGGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: SLSMAQFPNSAISVALSVPSQLT*LEWGLE
Trigger: CTCCAGACCCCACTCCAGCAATGTCAACTGTGAAGG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAACTGCTGTTAGCAGTTaGAAACTCGTCCCGGAGGCG +
Preference number: 5 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQTAVSS*KLVPEA
Trigger: CGCCTCCGGGACGAGTTTCAAACTGCTAACAGCAGT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAAGACCTGGATCAGATTaGGGGAGTTCTTTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPRPGSD*GSSLEN
Trigger: ATTCTCCAAAGAACTCCCCAAATCTGATCCAGGTCT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGAGCAAGAAGCAGAGGATaGTCGGCTTCTACATTCTTT +
Preference number: 5 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGARSRG*SASTFF
Trigger: AAAGAATGTAGAAGCCGACAATCCTCTGCTTCTTGC...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTTTCTGGGGTCACAGTaGACGACACTGAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCFLGSQ*TTLKSL
Trigger: CAAGCTCTTCAGTGTCGTCAACTGTGACCCCAGAAA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTGGAGCACCAGGAGGTaGAAAGCTTCCAGAACTTCT +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCWSTRR*KASRTS
Trigger: AGAAGTTCTGGAAGCTTTCAACCTCCTGGTGCTCCA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTCCTGTAGCCGCTCCTaGGCTAACATCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDSCSRS*ANIASC
Trigger: GCAGCTGGCGATGTTAGCCAAGGAGCGGCTACAGGA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTTACTGCAGACCCAGTTaGTCGCGCACCTCCTGTAGC +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSYCRPS*SRTSCS
Trigger: GCTACAGGAGGTGCGCGACAAACTGGGTCTGCAGTA...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACGGGAGCACAGATGTATaGAAGGGGCAAGATGGGTGC +
Preference number: 5 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNGSTDV*KGQDGC
Trigger: GCACCCATCTTGCCCCTTCAATACATCTGTGCTCCC...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGAACACCCCTTCACAGTaGACATTGCTGGAGTGGGGT +
Preference number: 5 (lower is better)
Translates to: SLSMAQFPNSAISVALSVNTPSQ*TLLEWG
Trigger: ACCCCACTCCAGCAATGTCAACTGTGAAGGGGTGTT...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTGCTCTAAGCGGACAATaGTTTGGCGCAAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCALSGQ*FGARNF
Trigger: GAAGTTCCTTGCGCCAAACAATTGTCCGCTTAGAGC...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTACTGCTGTTAGCAGTTaGAAACTCGTCCCGGAGGCG +
Preference number: 5 (lower is better)
Translates to: VQASNVNLQLIPHQWHESTAVSS*KLVPEA
Trigger: CGCCTCCGGGACGAGTTTCAAACTGCTAACAGCAGT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCCACCTAGGCATCTTTTaGCTGTTTTGGTCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCHLGIF*LFWSLQ
Trigger: TTGAAGAGACCAAAACAGCAAAAAGATGCCTAGGTG...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS TCA 90 bp GTTTTTACAATGTCTGTCCCAAGGACTGACTTCCTCCTCTTGGTCTaGGATGACATTACCCAGGTTTTGTGTGGGAATCATAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VFTMSVPRTDFLLLV*DDITQVLCGNHSSS
Trigger: GCTGCTGCTATGATTCCCACACAAAACCTGGGTAATGTCATCTCAGACCAAGAGGAGGAAGTCAGTCCTTGGGACAGACATTGTAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS GCA 90 bp GGGCCTTTAGGCTCTGAGAAGTCAGCTTGCTGCTCCATTTCTGTATaGCCAAGATTGCATAGTGGACAATTTTTGGTGTGGCTTCAATGT +
Preference number: 5 (lower is better)
Translates to: GPLGSEKSACCSISV*PRLHSGQFLVWLQC
Trigger: ACATTGAAGCCACACCAAAAATTGTCCACTATGCAATCTTGGGCATACAGAAATGGAGCAGCAAGCTGACTTCTCAGAGCCTAAAGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580384.1
ENST00000580732.6
CDS-3UTR CAA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCGAATTGGTGGGCTGTTaGAATCAGACATTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCELVGC*NQTFLH
Trigger: ATGAAGAAATGTCTGATTCAAACAGCCCACCAATTC...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACATGTGTTCAGGCAGATaGGGAGACTTGGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDMCSGR*GDLAPT
Trigger: GGTGGGGGCCAAGTCTCCCAATCTGCCTGAACACAT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTCTGGTAGAAATCGCTaGTCCACAGCACAAACTAGG +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCSGRNR*STAQTR
Trigger: CCTAGTTTGTGCTGTGGACAAGCGATTTCTACCAGA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAATTTCTGGGGTCACAGTaGACGACACTGAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: PPIADTGQTPPADFNESKFLGSQ*TTLKSL
Trigger: CAAGCTCTTCAGTGTCGTCAACTGTGACCCCAGAAA...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCTCATCAAACTGTACTaGGGGTCATGCACACTGACA +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCLIKLY*GSCTLT
Trigger: TGTCAGTGTGCATGACCCCAAGTACAGTTTGATGAG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCCCACGCCTGCATTATaGAACATGCCGGGAAGCACC +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDPTPAL*NMPGST
Trigger: GGTGCTTCCCGGCATGTTCAATAATGCAGGCGTGGG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAACACCCCTTCACAGTaGACATTGCTGGAGTGGGGT +
Preference number: 5 (lower is better)
Translates to: VQASNVNLQLIPHQWHESNTPSQ*TLLEWG
Trigger: ACCCCACTCCAGCAATGTCAACTGTGAAGGGGTGTT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS TCA 90 bp AAAGAGCCTGAAATGACACTCGTTAGTTCCACATGGGAGTTGTCATaGACTAGCACAAACAGTGTGTACGGGTTCTGTTTCACTCTCCTC +
Preference number: 5 (lower is better)
Translates to: KEPEMTLVSSTWELS*TSTNSVYGFCFTLL
Trigger: GAGGAGAGTGAAACAGAACCCGTACACACTGTTTGTGCTAGTTCATGACAACTCCCATGTGGAACTAACGAGTGTCATTTCAGGCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580732.6
CDS TCA 90 bp GCTTCCAGAACTTCTCTGCAATTAATGACTCTATCAGCTAGCCCATaGCTGGGTTCGCTATGTGACAAAGAGCCTGAAATGACACTCGTT +
Preference number: 5 (lower is better)
Translates to: ASRTSLQLMTLSASP*LGSLCDKEPEMTLV
Trigger: AACGAGTGTCATTTCAGGCTCTTTGTCACATAGCGAACCCAGTCATGGGCTAGCTGATAGAGTCATTAATTGCAGAGAAGTTCTGGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580732.6
CDS TCA 90 bp TTACCACCACATAATCTGGCAGCCTTTGATAGTGTCTCATTTCACTaGGAGTCCTTAAGGTCTCTGAAATGCCCTCCGCCAAAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LPPHNLAAFDSVSFH*ESLRSLKCPPPKSS
Trigger: AGAACTCTTTGGCGGAGGGCATTTCAGAGACCTTAAGGACTCTCAGTGAAATGAGACACTATCAAAGGCTGCCAGATTATGTGGTGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000581327.1
ENST00000584446.5
CDS-3UTR CAA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACAAATCCTTTCCTGCTaGACAAAAACCATCTGTAGT +
Preference number: 5 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGQILSC*TKTICS
Trigger: ACTACAGATGGTTTTTGTCAAGCAGGAAAGGATTTG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCACATCAGTGTCCTAAGGGACCTAATGATGTGGTTTaGAAATGTGATGCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: SYCVGLANPFIPHQCPKGPNDVV*KCDARK
Trigger: TTTCCTGGCATCACATTTCAAAACCACATCATTAGG...TCCCTTAGGACACTGATGTGGGATGAATGGATTCGCTAGGCCCACACAGTAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAATCCGCTGAAGAGTTaGCTGAACCAACACCTCCGA +
Preference number: 5 (lower is better)
Translates to: VQASNVNLQLIPHQWHESNPLKS*LNQHLR
Trigger: TCGGAGGTGTTGGTTCAGCAAACTCTTCAGCGGATT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACGCTAATGCGGGACTGTaGGGTCTGCAGAGTGTATGG +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDANAGL*GLQSVW
Trigger: CCATACACTCTGCAGACCCAACAGTCCCGCATTAGC...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCCCCACTGCAGAGACTaGCTGTACTCACTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDPHCRD*LYSLKP
Trigger: TGGCTTGAGTGAGTACAGCAAGTCTCTGCAGTGGGG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TTTGCTGGTGCCAACTGCTTAATTCCAACCAAACGGTGGGTGCAGGTTACCTGCTCTCCAAGAGGATCTTaGCCAGTTAATATCACAATA +
Preference number: 5 (lower is better)
Translates to: FAGANCLIPTKRWVQVTCSPRGS*PVNITI
Trigger: TATTGTGATATTAACTGGCAAAGATCCTCTTGGAGA...GCAGGTAACCTGCACCCACCGTTTGGTTGGAATTAAGCAGTTGGCACCAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACTCATCAAACTGTACTaGGGGTCATGCACACTGACA +
Preference number: 5 (lower is better)
Translates to: PPIADTGQTPPADFNESKLIKLY*GSCTLT
Trigger: TGTCAGTGTGCATGACCCCAAGTACAGTTTGATGAG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGACTGCATTCAAATTCTaGTCTGAAACCAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SLSMAQFPNSAISVALSVTAFKF*SETRGS
Trigger: GCTGCCCCTGGTTTCAGACAAGAATTTGAATGCAGT...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACAAGGAACTTCTGTCTaGGCAGATGACACACAGTGT +
Preference number: 5 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQQGTSV*ADDTQC
Trigger: ACACTGTGTGTCATCTGCCAAGACAGAAGTTCCTTG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTAGACCTGGATCAGATTaGGGGAGTTCTTTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCRPGSD*GSSLEN
Trigger: ATTCTCCAAAGAACTCCCCAAATCTGATCCAGGTCT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGAACATATGCCTCCCATaGCCGATACTGGACAAACAC +
Preference number: 5 (lower is better)
Translates to: SLSMAQFPNSAISVALSVNICLP*PILDKH
Trigger: GTGTTTGTCCAGTATCGGCAATGGGAGGCATATGTT...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCAGCAGGTCTACAGGTGAGTTACTGTGTGGGCCTAGCGAATCCATTCATCCCAAATGTTATTGGAATATaGCACAGACAGTGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SAGLQVSYCVGLANPFIPNVIGI*HRQWVS
Trigger: AGAAACCCACTGTCTGTGCAATATTCCAATAACATT...TGGGATGAATGGATTCGCTAGGCCCACACAGTAACTCACCTGTAGACCTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS TCA 90 bp CACCAGGAGGAATCCTGCTGGGATGTCAATTTGTTCCATACACAGTaGTACCAAACGCAAATCCTTTCCTGCTTGACAAAAACCATCTGT +
Preference number: 5 (lower is better)
Translates to: HQEESCWDVNLFHTQ*YQTQILSCLTKTIC
Trigger: ACAGATGGTTTTTGTCAAGCAGGAAAGGATTTGCGTTTGGTATCACTGTGTATGGAACAAATTGACATCCCAGCAGGATTCCTCCTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS TCA 90 bp GCTTCCAGAACTTCTCTGCAATTAATGACTCTATCAGCTAGCCCATaGCTGGGTTCGCTATGTGACAAAGAGCCTGAAATGACACTGATT +
Preference number: 5 (lower is better)
Translates to: ASRTSLQLMTLSASP*LGSLCDKEPEMTLI
Trigger: AATCAGTGTCATTTCAGGCTCTTTGTCACATAGCGAACCCAGTCATGGGCTAGCTGATAGAGTCATTAATTGCAGAGAAGTTCTGGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578955.1
CDS CCA 90 bp GCTGCTCCATTTCTGTATGCCCAAGATTGCATAGTGGACAATTTTTaGTGTGGCTTCAATGTGCTGCAAGACAGTCTTCAAGGACACATT +
Preference number: 5 (lower is better)
Translates to: AAPFLYAQDCIVDNF*CGFNVLQDSLQGHI
Trigger: AATGTGTCCTTGAAGACTGTCTTGCAGCACATTGAAGCCACACCAAAAATTGTCCACTATGCAATCTTGGGCATACAGAAATGGAGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580384.1
ENST00000580732.6
CDS-3UTR CAA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAACAGTCATGATTAAGTaGGGCAGTCAACACTTCAGG +
Preference number: 5 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQTVMIK*GSQHFR
Trigger: CCTGAAGTGTTGACTGCCCAACTTAATCATGACTGT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACCGGTTTACCAAATCTTaGTCCAGATCCTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNRFTKS*SRSSTL
Trigger: CAAGGTGGAGGATCTGGACAAAGATTTGGTAAACCG...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTATCCAGACTTCCATTTaGAGTGTAGCGGTTTACCAA +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCIQTSI*SVAVYQ
Trigger: TTGGTAAACCGCTACACTCAAAATGGAAGTCTGGAT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTAATCCGCTGAAGAGTTaGCTGAACCAACACCTCCGA +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSNPLKS*LNQHLR
Trigger: TCGGAGGTGTTGGTTCAGCAAACTCTTCAGCGGATT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTGCGAGTTAAATAGCTaGAGTCAATTAACCGGAGGT +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCCELNS*SQLTGG
Trigger: ACCTCCGGTTAATTGACTCAAGCTATTTAACTCGCA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAATTTATCACTTCTTGTTaGACCCCTGCCAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: PPIADTGQTPPADFNESKFITSC*TPASFS
Trigger: TGAGAAGCTGGCAGGGGTCAAACAAGAAGTGATAAA...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGTTTATCACTTCTTGTTaGACCCCTGCCAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SLSMAQFPNSAISVALSVFITSC*TPASFS
Trigger: TGAGAAGCTGGCAGGGGTCAAACAAGAAGTGATAAA...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAATTCCTTTATCACTTCTaGTTTGACCCCTGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: PPIADTGQTPPADFNESKFLYHF*FDPCQL
Trigger: AAGCTGGCAGGGGTCAAACAAGAAGTGATAAAGGAA...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAAATGATAAAGTCCCTTaGCCCTCCAACCTGAACATG +
Preference number: 5 (lower is better)
Translates to: PPIADTGQTPPADFNESKNDKVP*PSNLNM
Trigger: CATGTTCAGGTTGGAGGGCAAAGGGACTTTATCATT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCACCTAGGCATCTTTTaGCTGTTTTGGTCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCHLGIF*LFWSLQ
Trigger: TTGAAGAGACCAAAACAGCAAAAAGATGCCTAGGTG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAAAGGGGTGATGGTCTTTaGGCTTTATTCTGGCATATC +
Preference number: 5 (lower is better)
Translates to: PPIADTGQTPPADFNESKRGDGL*ALFWHI
Trigger: GATATGCCAGAATAAAGCCAAAAGACCATCACCCCT...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp ACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCAACCAGGTTCTAGGAACAAAGCCTTaGATCCAGGCCACATGGGAA +
Preference number: 5 (lower is better)
Translates to: TKPLIQATWESIFNFNQVLGTKP*IQATWE
Trigger: TTCCCATGTGGCCTGGATCAAAGGCTTTGTTCCTAG...AACCTGGTTGAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR CAA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACTCTAACAGTGTTTCCTaGTTGTCTGTCCCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNSNSVS*LSVPSA
Trigger: TGCAGAGGGGACAGACAACAAGGAAACACTGTTAGA...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580732.6
CDS TCA 90 bp GATAAAGCCAGTGGTTTCACAACATTGTTATTCCGGGTCAGGTCCTaGGCTCCACTTAAATTGATTGCAGAATTAGCTGGACTGAGAATC +
Preference number: 5 (lower is better)
Translates to: DKASGFTTLLFRVRS*APLKLIAELAGLRI
Trigger: GATTCTCAGTCCAGCTAATTCTGCAATCAATTTAAGTGGAGCTCAGGACCTGACCCGGAATAACAATGTTGTGAAACCACTGGCTTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579454.1
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTGAGGCTTCTATGGAGTaGTGGAGAGCTTCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSEASME*WRASSN
Trigger: ATTTGAGGAAGCTCTCCACAACTCCATAGAAGCCTC...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCGGTTTACCAAATCTTaGTCCAGATCCTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSRFTKS*SRSSTL
Trigger: CAAGGTGGAGGATCTGGACAAAGATTTGGTAAACCG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTTCTGGTAGAAATCGCTaGTCCACAGCACAAACTAGG +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSSGRNR*STAQTR
Trigger: CCTAGTTTGTGCTGTGGACAAGCGATTTCTACCAGA...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTGGAGCACCAGGAGGTaGAAAGCTTCCAGAACTTCT +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDWSTRR*KASRTS
Trigger: AGAAGTTCTGGAAGCTTTCAACCTCCTGGTGCTCCA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTGTGAAAATAGGGCTCTaGACTGCATTCAAATTCTTG +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCVKIGL*TAFKFL
Trigger: CAAGAATTTGAATGCAGTCAAGAGCCCTATTTTCAC...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAATGATAAAGTCCCTTaGCCCTCCAACCTGAACATG +
Preference number: 5 (lower is better)
Translates to: VQASNVNLQLIPHQWHESNDKVP*PSNLNM
Trigger: CATGTTCAGGTTGGAGGGCAAAGGGACTTTATCATT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTAAGTTATGGATGGCTTaGGGGAAGAGTTTATATGAG +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCKLWMA*GKSLYE
Trigger: CTCATATAAACTCTTCCCCAAAGCCATCCATAACTT...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCAAGGAACTTCTGTCTaGGCAGATGACACACAGTGT +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSQGTSV*ADDTQC
Trigger: ACACTGTGTGTCATCTGCCAAGACAGAAGTTCCTTG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAACAGACAGTGGGTTTCTaGGTATTATTTGCATTAGGC +
Preference number: 5 (lower is better)
Translates to: PPIADTGQTPPADFNESKQTVGF*VLFALG
Trigger: GCCTAATGCAAATAATACCAAGAAACCCACTGTCTG...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS GCA 90 bp TCTATGGAGTTGTGGAGAGCTTCCTCAAATCGAGCAGATTTCAGTTaGCCAGCATATGAATTCCCCATGATCTACACCTTGGTTTATTTA +
Preference number: 5 (lower is better)
Translates to: SMELWRASSNRADFS*PAYEFPMIYTLVYL
Trigger: TAAATAAACCAAGGTGTAGATCATGGGGAATTCATATGCTGGGCAACTGAAATCTGCTCGATTTGAGGAAGCTCTCCACAACTCCATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000584446.5
CDS CCA 90 bp TCCATTTCTGTATGCCCAAGATTGCATAGTGGACAATTTTTGGTGTaGCTTCAATGTGCTGCAAGACAGTCTTCAAGGACACATTCTTAC +
Preference number: 5 (lower is better)
Translates to: SISVCPRLHSGQFLV*LQCAARQSSRTHSY
Trigger: GTAAGAATGTGTCCTTGAAGACTGTCTTGCAGCACATTGAAGCCACACCAAAAATTGTCCACTATGCAATCTTGGGCATACAGAAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580384.1
ENST00000580732.6
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACTCCTCCACCTTGGGTTaGACATCTGCAGATGAGAAA +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDSSTLG*TSADEK
Trigger: TTTCTCATCTGCAGATGTCAAACCCAAGGTGGAGGA...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACAAATCCTTTCCTGCTaGACAAAAACCATCTGTAGT +
Preference number: 5 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQQILSC*TKTICS
Trigger: ACTACAGATGGTTTTTGTCAAGCAGGAAAGGATTTG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCCTAATGATGTGGTTTaGAAATGTGATGCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: SLSMAQFPNSAISVALSVPNDVV*KCDARK
Trigger: TTTCCTGGCATCACATTTCAAAACCACATCATTAGG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTTCTCCAAGAGGATCTTaGCCAGTTAATATCACAATA +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCSPRGS*PVNITI
Trigger: TATTGTGATATTAACTGGCAAAGATCCTCTTGGAGA...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACTGCGAGTTAAATAGCTaGAGTCAATTAACCGGAGGT +
Preference number: 5 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNCELNS*SQLTGG
Trigger: ACCTCCGGTTAATTGACTCAAGCTATTTAACTCGCA...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTTTCCTTTATCACTTCTaGTTTGACCCCTGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSFLYHF*FDPCQL
Trigger: AAGCTGGCAGGGGTCAAACAAGAAGTGATAAAGGAA...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGGTGAAAATAGGGCTCTaGACTGCATTCAAATTCTTG +
Preference number: 5 (lower is better)
Translates to: SLSMAQFPNSAISVALSVVKIGL*TAFKFL
Trigger: CAAGAATTTGAATGCAGTCAAGAGCCCTATTTTCAC...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AATCCATTCATCCCACATCAGTGTCCTAAGGGATTGCAAAGCTTAAAGCTGAACCATAGTGGACAATTTTaGGTGTGGCTTCAATGTGCT +
Preference number: 5 (lower is better)
Translates to: NPFIPHQCPKGLQSLKLNHSGQF*VWLQCA
Trigger: AGCACATTGAAGCCACACCAAAAATTGTCCACTATG...GTTCAGCTTTAAGCTTTGCAATCCCTTAGGACACTGATGTGGGATGAATGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp CCTCCCATTGCCGATACTGGACAAACACCCCCTGCTGATTTTAATGAATCAAAATCTGTATGCCCAAGATaGCATAGTGGACAATTTTTG +
Preference number: 5 (lower is better)
Translates to: PPIADTGQTPPADFNESKSVCPR*HSGQFL
Trigger: CAAAAATTGTCCACTATGCAATCTTGGGCATACAGA...TTTTGATTCATTAAAATCAGCAGGGGGTGTTTGTCCAGTATCGGCAATGGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGTCACAGAAATACCTGTaGAAGTCATACTGCACATTC +
Preference number: 5 (lower is better)
Translates to: SLSMAQFPNSAISVALSVSQKYL*KSYCTF
Trigger: GAATGTGCAGTATGACTTCAACAGGTATTTCTGTGA...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGAGCTTTCAGCATAATTaGCTCAAATTCTTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: SLSMAQFPNSAISVALSVSFQHN*LKFFPE
Trigger: CTCAGGGAAGAATTTGAGCAAATTATGCTGAAAGCT...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAAGCTTTCAGCATAATTaGCTCAAATTCTTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQSFQHN*LKFFPE
Trigger: CTCAGGGAAGAATTTGAGCAAATTATGCTGAAAGCT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TGTGAACTGTCATACATGCTGAGGTTCAGCAGGTCTACAGGTGAGTTACTGTGTCATCTTTTTGCTGTTTaGGTCTCTTCAAAAGCTCAT +
Preference number: 5 (lower is better)
Translates to: CELSYMLRFSRSTGELLCHLFAV*VSSKAH
Trigger: ATGAGCTTTTGAAGAGACCAAAACAGCAAAAAGATG...ACACAGTAACTCACCTGTAGACCTGCTGAACCTCAGCATGTATGACAGTTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACAACATATGCCTCCCATaGCCGATACTGGACAAACAC +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDNICLP*PILDKH
Trigger: GTGTTTGTCCAGTATCGGCAATGGGAGGCATATGTT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAACATGGTGTCCTGTGCTaGTGCAATTTTATCCTTAAA +
Preference number: 5 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQHGVLC*CNFILK
Trigger: TTTAAGGATAAAATTGCACAAGCACAGGACACCATG...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TTACTAGGAACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCGACATTACCCAGGTTTaGTGTGGGAATCATAGCAGC +
Preference number: 5 (lower is better)
Translates to: LLGTKPLIQATWESIFNFDITQV*CGNHSS
Trigger: GCTGCTATGATTCCCACACAAAACCTGGGTAATGTC...GAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGTTCCTAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS TCA 90 bp GGCATGATCTTTGGTTTAATGATAAAGTCCCTTTGCCCTCCAACCTaGACATGTTTCTTCATGAGACTGAAGTTATTAAAGCGGCAGATG +
Preference number: 5 (lower is better)
Translates to: GMIFGLMIKSLCPPT*TCFFMRLKLLKRQM
Trigger: CATCTGCCGCTTTAATAACTTCAGTCTCATGAAGAAACATGTTCAGGTTGGAGGGCAAAGGGACTTTATCATTAAACCAAAGATCATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580384.1
CDS GCA 90 bp CACAGTACTTCAAAGACCTGGGAAAGGTTTCTCCAAGAGGATCTTTaGCAGTTAATATCACAATACAAGGTAGACCGTCTAAATCTTGGT +
Preference number: 5 (lower is better)
Translates to: HSTSKTWERFLQEDL*QLISQYKVDRLNLG
Trigger: ACCAAGATTTAGACGGTCTACCTTGTATTGTGATATTAACTGGCAAAGATCCTCTTGGAGAAACCTTTCCCAGGTCTTTGAAGTACTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTATCCAGACTTCCATTTaGAGTGTAGCGGTTTACCAA +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSIQTSI*SVAVYQ
Trigger: TTGGTAAACCGCTACACTCAAAATGGAAGTCTGGAT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTTCACAGAAATACCTGTaGAAGTCATACTGCACATTC +
Preference number: 5 (lower is better)
Translates to: VQASNVNLQLIPHQWHESSQKYL*KSYCTF
Trigger: GAATGTGCAGTATGACTTCAACAGGTATTTCTGTGA...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTAAGTTATGGATGGCTTaGGGGAAGAGTTTATATGAG +
Preference number: 5 (lower is better)
Translates to: VQASNVNLQLIPHQWHESKLWMA*GKSLYE
Trigger: CTCATATAAACTCTTCCCCAAAGCCATCCATAACTT...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TCTCTTTCTATGGCTCAATTTCCCAATTCGGCAATTTCTGTGGCGTTGTCAGTGCATCTTTTTGCTGTTTaGGTCTCTTCAAAAGCTCAT +
Preference number: 5 (lower is better)
Translates to: SLSMAQFPNSAISVALSVHLFAV*VSSKAH
Trigger: ATGAGCTTTTGAAGAGACCAAAACAGCAAAAAGATG...CACTGACAACGCCACAGAAATTGCCGAATTGGGAAATTGAGCCATAGAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTAAGAAAAATCCCAAATaGTTTCTGTCCCATCCCACC +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSKKNPK*FLSHPT
Trigger: GGTGGGATGGGACAGAAACAATTTGGGATTTTTCTT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp AGAAACCCTGAGAGGCCATCCACCCCAGGTACAATTGTTTCAGAATTCTTTCAAAACGTTAATCTTCAATaGATTCCACACCAATGGCAT +
Preference number: 5 (lower is better)
Translates to: RNPERPSTPGTIVSEFFQNVNLQ*IPHQWH
Trigger: ATGCCATTGGTGTGGAATCAATTGAAGATTAACGTT...TTGAAAGAATTCTGAAACAATTGTACCTGGGGTGGATGGCCTCTCAGGGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTCAGACAGTGGGTTTCTaGGTATTATTTGCATTAGGC +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSQTVGF*VLFALG
Trigger: GCCTAATGCAAATAATACCAAGAAACCCACTGTCTG...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACAGGGGTGATGGTCTTTaGGCTTTATTCTGGCATATC +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDRGDGL*ALFWHI
Trigger: GATATGCCAGAATAAAGCCAAAAGACCATCACCCCT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp GTTCAGGCCTCAAACGTTAATCTTCAATTGATTCCACACCAATGGCATGAGTCTTTGCTCAGCTTACTCTaGATTTCTAACAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: VQASNVNLQLIPHQWHESLLSLL*ISNSVS
Trigger: GGAAACACTGTTAGAAATCAAGAGTAAGCTGAGCAA...AGACTCATGCCATTGGTGTGGAATCAATTGAAGATTAACGTTTGAGGCCTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580732.6
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTACATCTGATCCATCTTaGCTCTCTTCCTCTATTGCT +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSTSDPS*LSSSIA
Trigger: AGCAATAGAGGAAGAGAGCAAAGATGGATCAGATGT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580732.6
CDS TCA 90 bp ACCATGATCTTTGGTTTAATGATAAAGTCCCTTTGCCCTCCAACCTaGACATGTTTCTTCATGAGACTGAAGTTATTAAAGCGGCAGATG +
Preference number: 5 (lower is better)
Translates to: TMIFGLMIKSLCPPT*TCFFMRLKLLKRQM
Trigger: CATCTGCCGCTTTAATAACTTCAGTCTCATGAAGAAACATGTTCAGGTTGGAGGGCAAAGGGACTTTATCATTAAACCAAAGATCATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580732.6
CDS GCA 90 bp TCTATGGAGTTGTGGAGAGCTTCCTCAAATCGAGCAGATTTCAGTTaGCCAGCATATGAATTCCCCATGATCTTGGTTTATTTATTAACA +
Preference number: 5 (lower is better)
Translates to: SMELWRASSNRADFS*PAYEFPMILVYLLT
Trigger: TGTTAATAAATAAACCAAGATCATGGGGAATTCATATGCTGGGCAACTGAAATCTGCTCGATTTGAGGAAGCTCTCCACAACTCCATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580732.6
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCATAGTGGACAATTTTaGGTGTGGCTTCAATGTGCT +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDHSGQF*VWLQCA
Trigger: AGCACATTGAAGCCACACCAAAAATTGTCCACTATG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACGAATTGGTGGGCTGTTaGAATCAGACATTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDELVGC*NQTFLH
Trigger: ATGAAGAAATGTCTGATTCAAACAGCCCACCAATTC...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TTACTAGGAACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCCCTAATGATGTGGTTTaGAAATGTGATGCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: LLGTKPLIQATWESIFNFPNDVV*KCDARK
Trigger: TTTCCTGGCATCACATTTCAAAACCACATCATTAGG...GAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGTTCCTAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACATAATCTGGCAGCCTTaGATAGTGTCTCATTTCACT +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDIIWQP*IVSHFT
Trigger: AGTGAAATGAGACACTATCAAAGGCTGCCAGATTAT...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TTACTAGGAACAAAGCCTTTGATCCAGGCCACATGGGAAAGCATTTTTAATTTCATAATCTGGCAGCCTTaGATAGTGTCTCATTTCACT +
Preference number: 5 (lower is better)
Translates to: LLGTKPLIQATWESIFNFIIWQP*IVSHFT
Trigger: AGTGAAATGAGACACTATCAAAGGCTGCCAGATTAT...GAAATTAAAAATGCTTTCCCATGTGGCCTGGATCAAAGGCTTTGTTCCTAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS-3UTR CAA 90 bp GGGGTGATGGTCTTTTGGCTTTATTCTGGCATATCTCTTCCAGAGTTAAATAGTAATGTTATTGGAATATaGCACAGACAGTGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: GVMVFWLYSGISLPELNSNVIGI*HRQWVS
Trigger: AGAAACCCACTGTCTGTGCAATATTCCAATAACATT...ACTATTTAACTCTGGAAGAGATATGCCAGAATAAAGCCAAAAGACCATCACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS-3UTR CAA 90 bp TACACACAAATCATGGTGTCCTGTGCTTGTGCAATTTTATCCTTAAAGAAGGACCATGGTGTCCTGTGCTaGTGCAATTTTATCCTTAAA +
Preference number: 5 (lower is better)
Translates to: YTQIMVSCACAILSLKKDHGVLC*CNFILK
Trigger: TTTAAGGATAAAATTGCACAAGCACAGGACACCATG...GTCCTTCTTTAAGGATAAAATTGCACAAGCACAGGACACCATGATTTGTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424526.6
ENST00000580732.6
CDS TCA 72 bp CTGGTGGCAGGGCTGCCTGTGGGCCCCGGCAGCCTCTaGTGGGCTGTCCCGGCCATGGGAGGGTCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: LVAGLPVGPGSL*WAVPAMGGSWV
Trigger: GACCCAGGACCCTCCCATGGCCGGGACAGCCCATCAGAGGCTGCCGGGGCCCACAGGCAGCCCTGCCACCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CAA 90 bp CCCGGCCATGGGAGGGTCCTGGGTCCTGAGGATGATGATGACGGCTaGGAGGTGGTGCTGCTCGCCATCTGGGGGCCCAGGGAGTCACAT +
Preference number: 6 (lower is better)
Translates to: PGHGRVLGPEDDDDG*EVVLLAIWGPRESH
Trigger: ATGTGACTCCCTGGGCCCCCAGATGGCGAGCAGCACCACCTCCAAGCCGTCATCATCATCCTCAGGACCCAGGACCCTCCCATGGCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS GCA 72 bp GGAAGTTTCGGGTGCCAGAGGCCGGGTCCAGCTGGTTaGTATAGTCAGCGTGGTGCTGCCGGGCCAAGGTCC +
Preference number: 6 (lower is better)
Translates to: GSFGCQRPGPAG*YSQRGAAGPRS
Trigger: GGACCTTGGCCCGGCAGCACCACGCTGACTATAGCAACCAGCTGGACCCGGCCTCTGGCACCCGAAACTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS GCA 72 bp CTGTCAGCAGGAGCCGTCGGGGGTGGAAGTTTCGGGTaGCAGAGGCCGGGTCCAGCTGGTTGCTATAGTCAG +
Preference number: 6 (lower is better)
Translates to: LSAGAVGGGSFG*QRPGPAGCYSQ
Trigger: CTGACTATAGCAACCAGCTGGACCCGGCCTCTGGCACCCGAAACTTCCACCCCCGACGGCTCCTGCTGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CCA 72 bp TCCTGGGTCCTGAGGATGATGATGACGGCTTGGAGGTaGTGCTGCTCGCCATCTGGGGGCCCAGGGAGTCAC +
Preference number: 6 (lower is better)
Translates to: SWVLRMMMTAWR*CCSPSGGPGSH
Trigger: GTGACTCCCTGGGCCCCCAGATGGCGAGCAGCACCACCTCCAAGCCGTCATCATCATCCTCAGGACCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CAA 72 bp AGACCCAGTTTGTCGCGCACCTCCTGTAGCCGCTCCTaGGCTAACATCGCCAGCTGCACCGAGGGCACCCTG +
Preference number: 6 (lower is better)
Translates to: RPSLSRTSCSRS*ANIASCTEGTL
Trigger: CAGGGTGCCCTCGGTGCAGCTGGCGATGTTAGCCAAGGAGCGGCTACAGGAGGTGCGCGACAAACTGGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CAA 90 bp CCATTCTCCATGATGGAACCCGAGGTCCCTGTGACAGCGCTGCTGTaGCTCTGGGGCCGCTCCAGGTCGATGAGCAGCTCATCGGAGTCA +
Preference number: 6 (lower is better)
Translates to: PFSMMEPEVPVTALL*LWGRSRSMSSSSES
Trigger: TGACTCCGATGAGCTGCTCATCGACCTGGAGCGGCCCCAGAGCAACAGCAGCGCTGTCACAGGGACCTCGGGTTCCATCATGGAGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CCA 72 bp GATGATGACGGCTTGGAGGTGGTGCTGCTCGCCATCTaGGGGCCCAGGGAGTCACATTCCTGCTTCAGAGTC +
Preference number: 6 (lower is better)
Translates to: DDDGLEVVLLAI*GPRESHSCFRV
Trigger: GACTCTGAAGCAGGAATGTGACTCCCTGGGCCCCCAGATGGCGAGCAGCACCACCTCCAAGCCGTCATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CAA 90 bp CGATACTGCAGACCCAGTTTGTCGCGCACCTCCTGTAGCCGCTCCTaGGCTAACATCGCCAGCTGCACCGAGGGCACCCTGATAATGAGC +
Preference number: 6 (lower is better)
Translates to: RYCRPSLSRTSCSRS*ANIASCTEGTLIMS
Trigger: GCTCATTATCAGGGTGCCCTCGGTGCAGCTGGCGATGTTAGCCAAGGAGCGGCTACAGGAGGTGCGCGACAAACTGGGTCTGCAGTATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS TCA 72 bp GTCCAGGGCAACAGTGGGTCCCCGGATGACCTCTTTTaGGACATAGCAGCATGCCAGACCCACCTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: VQGNSGSPDDLF*DIAACQTHLLL
Trigger: GAGCAGGAGGTGGGTCTGGCATGCTGCTATGTCTCAAAAGAGGTCATCCGGGGACCCACTGTTGCCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS GCA 72 bp ACCTCCTGTAGCCGCTCCTTGGCTAACATCGCCAGCTaGACCGAGGGCACCCTGATAATGAGCATGTGTCCC +
Preference number: 6 (lower is better)
Translates to: TSCSRSLANIAS*TEGTLIMSMCP
Trigger: GGGACACATGCTCATTATCAGGGTGCCCTCGGTGCAGCTGGCGATGTTAGCCAAGGAGCGGCTACAGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS GCA 72 bp GTGGCCGGGTTCCCAAGGATGATCTCAAACCGATACTaGAGACCCAGTTTGTCGCGCACCTCCTGTAGCCGC +
Preference number: 6 (lower is better)
Translates to: VAGFPRMISNRY*RPSLSRTSCSR
Trigger: GCGGCTACAGGAGGTGCGCGACAAACTGGGTCTGCAGTATCGGTTTGAGATCATCCTTGGGAACCCGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CCA 72 bp GGGCGAACTGTAGGGACAGGTACAACTAAGCCAGGTTaGGGGAGAGGTGACCCAGGATACCATCCCCGGTGT +
Preference number: 6 (lower is better)
Translates to: GRTVGTGTTKPG*GRGDPGYHPRC
Trigger: ACACCGGGGATGGTATCCTGGGTCACCTCTCCCCCAACCTGGCTTAGTTGTACCTGTCCCTACAGTTCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000579454.1
ENST00000580732.6
ENST00000584446.5
CDS CAA 90 bp GCCGGGTTCCCAAGGATGATCTCAAACCGATACTGCAGACCCAGTTaGTCGCGCACCTCCTGTAGCCGCTCCTTGGCTAACATCGCCAGC +
Preference number: 6 (lower is better)
Translates to: AGFPRMISNRYCRPS*SRTSCSRSLANIAS
Trigger: GCTGGCGATGTTAGCCAAGGAGCGGCTACAGGAGGTGCGCGACAAACTGGGTCTGCAGTATCGGTTTGAGATCATCCTTGGGAACCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS TCA 72 bp AATGCTGAGTGTTTCTGGTGTGCTGTGGTCGCGGAGTaGCGCCATGGTGGTGAGAGCCATCAGGGCCTCAGA +
Preference number: 6 (lower is better)
Translates to: NAECFWCAVVAE*RHGGESHQGLR
Trigger: TCTGAGGCCCTGATGGCTCTCACCACCATGGCGTCACTCCGCGACCACAGCACACCAGAAACACTCAGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578383.1
ENST00000578955.1
ENST00000580732.6
CDS CCA 72 bp GGCCAAGAATCCACCTATGCAAATGAGGCCTGCAGGTaGGAGGAGTTCAGGTGGCACAGACGCCATCAACCC +
Preference number: 6 (lower is better)
Translates to: GQESTYANEACR*EEFRWHRRHQP
Trigger: GGGTTGATGGCGTCTGTGCCACCTGAACTCCTCCCACCTGCAGGCCTCATTTGCATAGGTGGATTCTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584446.5
CDS CAA 90 bp TCGTCACATCTCAGAAGTGGGCTCGTGATCCCCCACTGCAGAGACTaGCTGTACTCACTCAAGCCAAAGTACAGCTTCTCCTCGCAGCCC +
Preference number: 6 (lower is better)
Translates to: SSHLRSGLVIPHCRD*LYSLKPKYSFSSQP
Trigger: GGGCTGCGAGGAGAAGCTGTACTTTGGCTTGAGTGAGTACAGCAAGTCTCTGCAGTGGGGGATCACGAGCCCACTTCTGAGATGTGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578383.1
ENST00000578955.1
ENST00000580732.6
CDS GCA 72 bp TTCTTTCAAAAACTCACTTGTGGTGAGCATGCTCTCTaGCAGAGCTCGGGACTGGTGCTGACCCAGCCGCAC +
Preference number: 6 (lower is better)
Translates to: FFQKLTCGEHAL*QSSGLVLTQPH
Trigger: GTGCGGCTGGGTCAGCACCAGTCCCGAGCTCTGGCAGAGAGCATGCTCACCACAAGTGAGTTTTTGAAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269218.10
CDS GCA 72 bp ACCTCATTGCTAGAGCTAATGCGGGACTGTTGGGTCTaGAGAGTGTATGGGAAGGAGCTGACCTGGAGCACC +
Preference number: 6 (lower is better)
Translates to: TSLLELMRDCWV*RVYGKELTWST
Trigger: GGTGCTCCAGGTCAGCTCCTTCCCATACACTCTGCAGACCCAACAGTCCCGCATTAGCTCTAGCAATGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS GCA 72 bp GGGAGGAGTTCAGGTGGCACAGACGCCATCAACCCATaGAGGGCCATCCTCGCCTTGAGAAAATTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: GRSSGGTDAINP*RAILALRKFLF
Trigger: GAAGAGAAATTTTCTCAAGGCGAGGATGGCCCTGCATGGGTTGATGGCGTCTGTGCCACCTGAACTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584446.5
CDS CCA 72 bp AGGTCATCCATAATGCTGAGTGTTTCTGGTGTGCTGTaGTCGCGGAGTGACGCCATGGTGGTGAGAGCCATC +
Preference number: 6 (lower is better)
Translates to: RSSIMLSVSGVL*SRSDAMVVRAI
Trigger: GATGGCTCTCACCACCATGGCGTCACTCCGCGACCACAGCACACCAGAAACACTCAGCATTATGGATGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578383.1
ENST00000578955.1
ENST00000580732.6
CDS CAA 72 bp GCACAAACTAGGATGTGTTCAGGCAGATTGGGAGACTaGGCCCCCACCAGGAGGAATCCTGCTGGGATGTCA +
Preference number: 6 (lower is better)
Translates to: AQTRMCSGRLGD*APTRRNPAGMS
Trigger: TGACATCCCAGCAGGATTCCTCCTGGTGGGGGCCAAGTCTCCCAATCTGCCTGAACACATCCTAGTTTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS CAA 72 bp CCAAGGATGATCTCAAACCGATACTGCAGACCCAGTTaGTCGCGCACCTCCTGTAGCCGCTCCTTGGCTAAC +
Preference number: 6 (lower is better)
Translates to: PRMISNRYCRPS*SRTSCSRSLAN
Trigger: GTTAGCCAAGGAGCGGCTACAGGAGGTGCGCGACAAACTGGGTCTGCAGTATCGGTTTGAGATCATCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CAA 90 bp CAGCTGTATCCAGTGAACCTCATTGCTAGAGCTAATGCGGGACTGTaGGGTCTGCAGAGTGTATGGGAAGGAGCTGACCTGGAGCACCAG +
Preference number: 6 (lower is better)
Translates to: QLYPVNLIARANAGL*GLQSVWEGADLEHQ
Trigger: CTGGTGCTCCAGGTCAGCTCCTTCCCATACACTCTGCAGACCCAACAGTCCCGCATTAGCTCTAGCAATGAGGTTCACTGGATACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS TCA 72 bp CTGGGAACAATGATGATGAAGTCTACTTTGCTGAAGTaGCCGAGGTCCAGGCTCTGGCTGCCACTGTCCGCT +
Preference number: 6 (lower is better)
Translates to: LGTMMMKSTLLK*PRSRLWLPLSA
Trigger: AGCGGACAGTGGCAGCCAGAGCCTGGACCTCGGTCACTTCAGCAAAGTAGACTTCATCATCATTGTTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000578955.1
ENST00000580732.6
ENST00000584446.5
CDS TCA 72 bp ACTGAAGCTCTCGATGTCAGGCCAGGGCTCTCCCTCTaGCTGGCTCACTTCACTGCTTTCATTGTGATCGGT +
Preference number: 6 (lower is better)
Translates to: TEALDVRPGLSL*LAHFTAFIVIG
Trigger: ACCGATCACAATGAAAGCAGTGAAGTGAGCCAGTCAGAGGGAGAGCCCTGGCCTGACATCGAGAGCTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS TCA 72 bp TACAGAGGCATCTCATACTCTTTGACCACCAGGAGGTaGAGGTGGCTGATGCCCTCCATGGCGTGGAAAAGG +
Preference number: 6 (lower is better)
Translates to: YRGISYSLTTRR*RWLMPSMAWKR
Trigger: CCTTTTCCACGCCATGGAGGGCATCAGCCACCTTCACCTCCTGGTGGTCAAAGAGTATGAGATGCCTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CCA 72 bp ACAAAGAGTAATTCCCTGTGTGGGCTGGAGTGGAGCTaGATGCACTGCCCTTCCCTCCATGGCTACTGTTTC +
Preference number: 6 (lower is better)
Translates to: TKSNSLCGLEWS*MHCPSLHGYCF
Trigger: GAAACAGTAGCCATGGAGGGAAGGGCAGTGCATCCAGCTCCACTCCAGCCCACACAGGGAATTACTCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000579454.1
ENST00000580732.6
ENST00000584446.5
CDS CCA 72 bp AGGCTCTGGCTGCCACTGTCCGCTATAGCACACACCTaGGATAAGAGTTTTCTGGCAACTGTTAGCTGCGGT +
Preference number: 6 (lower is better)
Translates to: RLWLPLSAIAHT*DKSFLATVSCG
Trigger: ACCGCAGCTAACAGTTGCCAGAAAACTCTTATCCCAGGTGTGTGCTATAGCGGACAGTGGCAGCCAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000578955.1
ENST00000580732.6
ENST00000584446.5
CDS CAA 72 bp CCAGTGAACCTCATTGCTAGAGCTAATGCGGGACTGTaGGGTCTGCAGAGTGTATGGGAAGGAGCTGACCTG +
Preference number: 6 (lower is better)
Translates to: PVNLIARANAGL*GLQSVWEGADL
Trigger: CAGGTCAGCTCCTTCCCATACACTCTGCAGACCCAACAGTCCCGCATTAGCTCTAGCAATGAGGTTCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CAA 72 bp CTCAGAAGTGGGCTCGTGATCCCCCACTGCAGAGACTaGCTGTACTCACTCAAGCCAAAGTACAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: LRSGLVIPHCRD*LYSLKPKYSFS
Trigger: GGAGAAGCTGTACTTTGGCTTGAGTGAGTACAGCAAGTCTCTGCAGTGGGGGATCACGAGCCCACTTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578383.1
ENST00000578955.1
ENST00000580732.6
CDS CAA 90 bp AGAAATCGCTTGTCCACAGCACAAACTAGGATGTGTTCAGGCAGATaGGGAGACTTGGCCCCCACCAGGAGGAATCCTGCTGGGATGTCA +
Preference number: 6 (lower is better)
Translates to: RNRLSTAQTRMCSGR*GDLAPTRRNPAGMS
Trigger: TGACATCCCAGCAGGATTCCTCCTGGTGGGGGCCAAGTCTCCCAATCTGCCTGAACACATCCTAGTTTGTGCTGTGGACAAGCGATTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS GCA 72 bp TCGTCACATCTCAGAAGTGGGCTCGTGATCCCCCACTaGAGAGACTTGCTGTACTCACTCAAGCCAAAGTAC +
Preference number: 6 (lower is better)
Translates to: SSHLRSGLVIPH*RDLLYSLKPKY
Trigger: GTACTTTGGCTTGAGTGAGTACAGCAAGTCTCTGCAGTGGGGGATCACGAGCCCACTTCTGAGATGTGACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578383.1
ENST00000578955.1
ENST00000580732.6
CDS GCA 72 bp ATGCCCTCCATGGCGTGGAAAAGGTTTAGGAGTCCGTaGTCATGTCGACCACTGGAAGGAGTGAAAATAGGG +
Preference number: 6 (lower is better)
Translates to: MPSMAWKRFRSP*SCRPLEGVKIG
Trigger: CCCTATTTTCACTCCTTCCAGTGGTCGACATGAGCACGGACTCCTAAACCTTTTCCACGCCATGGAGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CAA 90 bp GGCCGTGGTACCACACTACTACATCTGAGGGAGGCTTCTATGGAGTaGTGGAGAGCTTCCTCAAATCGAGCAGATTTCAGTTGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: GRGTTLLHLREASME*WRASSNRADFSCPA
Trigger: TGCTGGGCAACTGAAATCTGCTCGATTTGAGGAAGCTCTCCACAACTCCATAGAAGCCTCCCTCAGATGTAGTAGTGTGGTACCACGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS CAA 90 bp TTGTCCACAGCACAAACTAGGATGTGTTCAGGCAGATTGGGAGACTaGGCCCCCACCAGGAGGAATCCTGCTGGGATGTCAATTTGTTCC +
Preference number: 6 (lower is better)
Translates to: LSTAQTRMCSGRLGD*APTRRNPAGMSICS
Trigger: GGAACAAATTGACATCCCAGCAGGATTCCTCCTGGTGGGGGCCAAGTCTCCCAATCTGCCTGAACACATCCTAGTTTGTGCTGTGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS TCA 72 bp TCATTTCCTCTCCAACTCTTTAATCGCGCCACAAAGTaGGTTGCAACACTGAGTTCGGTGGCCGGGTTCCCA +
Preference number: 6 (lower is better)
Translates to: SFPLQLFNRATK*VATLSSVAGFP
Trigger: TGGGAACCCGGCCACCGAACTCAGTGTTGCAACTCACTTTGTGGCGCGATTAAAGAGTTGGAGAGGAAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS TCA 72 bp TTTCAAAAGTCTCGTCACATCTCAGAAGTGGGCTCGTaGTCCCCCACTGCAGAGACTTGCTGTACTCACTCA +
Preference number: 6 (lower is better)
Translates to: FQKSRHISEVGS*SPTAETCCTHS
Trigger: TGAGTGAGTACAGCAAGTCTCTGCAGTGGGGGATCACGAGCCCACTTCTGAGATGTGACGAGACTTTTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578383.1
ENST00000578955.1
ENST00000580732.6
CDS CCA 72 bp CCAAAGTACAGCTTCTCCTCGCAGCCCACGTCCTCCTaGTTCAAAATACAGAGCAAAAACCCAATGAGGACA +
Preference number: 6 (lower is better)
Translates to: PKYSFSSQPTSS*FKIQSKNPMRT
Trigger: TGTCCTCATTGGGTTTTTGCTCTGTATTTTGAACCAGGAGGACGTGGGCTGCGAGGAGAAGCTGTACTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578383.1
CDS GCA 72 bp AGAATGGGGCCTTTAGGCTCTGAGAAGTCAGCTTGCTaGTCCATTTCTGTATGCCCAAGATTGCATAGTGGA +
Preference number: 6 (lower is better)
Translates to: RMGPLGSEKSAC*SISVCPRLHSG
Trigger: TCCACTATGCAATCTTGGGCATACAGAAATGGAGCAGCAAGCTGACTTCTCAGAGCCTAAAGGCCCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580384.1
ENST00000580732.6
CDS TCA 72 bp ATGTCTGTCCCAAGGACTGACTTCCTCCTCTTGGTCTaGGATGACATTACCCAGGTTTTGTGTGGGAATCAT +
Preference number: 6 (lower is better)
Translates to: MSVPRTDFLLLV*DDITQVLCGNH
Trigger: ATGATTCCCACACAAAACCTGGGTAATGTCATCTCAGACCAAGAGGAGGAAGTCAGTCCTTGGGACAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS GCA 72 bp GGCTCTGAGAAGTCAGCTTGCTGCTCCATTTCTGTATaGCCAAGATTGCATAGTGGACAATTTTTGGTGTGG +
Preference number: 6 (lower is better)
Translates to: GSEKSACCSISV*PRLHSGQFLVW
Trigger: CCACACCAAAAATTGTCCACTATGCAATCTTGGGCATACAGAAATGGAGCAGCAAGCTGACTTCTCAGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580384.1
ENST00000580732.6
CDS CCA 72 bp ACACTACTACATCTGAGGGAGGCTTCTATGGAGTTGTaGAGAGCTTCCTCAAATCGAGCAGATTTCAGTTGC +
Preference number: 6 (lower is better)
Translates to: TLLHLREASMEL*RASSNRADFSC
Trigger: GCAACTGAAATCTGCTCGATTTGAGGAAGCTCTCCACAACTCCATAGAAGCCTCCCTCAGATGTAGTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS CCA 72 bp TTACAATGTCTGTCCCAAGGACTGACTTCCTCCTCTTaGTCTGAGATGACATTACCCAGGTTTTGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: LQCLSQGLTSSS*SEMTLPRFCVG
Trigger: TCCCACACAAAACCTGGGTAATGTCATCTCAGACCAAGAGGAGGAAGTCAGTCCTTGGGACAGACATTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581327.1
CDS CAA 72 bp ACCACACTACTACATCTGAGGGAGGCTTCTATGGAGTaGTGGAGAGCTTCCTCAAATCGAGCAGATTTCAGT +
Preference number: 6 (lower is better)
Translates to: TTLLHLREASME*WRASSNRADFS
Trigger: ACTGAAATCTGCTCGATTTGAGGAAGCTCTCCACAACTCCATAGAAGCCTCCCTCAGATGTAGTAGTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS CAA 72 bp TCATGTCGACCACTGGAAGGAGTGAAAATAGGGCTCTaGACTGCATTCAAATTCTTGTCTGAAACCAGGGGC +
Preference number: 6 (lower is better)
Translates to: SCRPLEGVKIGL*TAFKFLSETRG
Trigger: GCCCCTGGTTTCAGACAAGAATTTGAATGCAGTCAAGAGCCCTATTTTCACTCCTTCCAGTGGTCGACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CAA 72 bp TTGCTCAGCTTACTCTTGATTTCTAACAGTGTTTCCTaGTTGTCTGTCCCCTCTGCAGACCCTGAAACCCCT +
Preference number: 6 (lower is better)
Translates to: LLSLLLISNSVS*LSVPSADPETP
Trigger: AGGGGTTTCAGGGTCTGCAGAGGGGACAGACAACAAGGAAACACTGTTAGAAATCAAGAGTAAGCTGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580732.6
CDS CAA 90 bp GGCTCTTTCTCTCAGAGTAAATTCTTGCATAGCTTTCAGCATAATTaGCTCAAATTCTTCCCTGAGAGGTACCTGATCAGGACCCAGCCG +
Preference number: 6 (lower is better)
Translates to: GSFSQSKFLHSFQHN*LKFFPERYLIRTQP
Trigger: CGGCTGGGTCCTGATCAGGTACCTCTCAGGGAAGAATTTGAGCAAATTATGCTGAAAGCTATGCAAGAATTTACTCTGAGAGAAAGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS CCA 72 bp ACAGTTGACGACACTGAAGAGCTTGGCTTAATAGAGTaGCAAGAAGCAGAGGATTGTCGGCTTCTACATTCT +
Preference number: 6 (lower is better)
Translates to: TVDDTEELGLIE*QEAEDCRLLHS
Trigger: AGAATGTAGAAGCCGACAATCCTCTGCTTCTTGCCACTCTATTAAGCCAAGCTCTTCAGTGTCGTCAACTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000579454.1
ENST00000580732.6
ENST00000584446.5
CDS CAA 90 bp TGCTGCTCCATTTCTGTATGCCCAAGATTGCATAGTGGACAATTTTaGGTGTGGCTTCAATGTGCTGCAAGACAGTCTTCAAGGACACAT +
Preference number: 6 (lower is better)
Translates to: CCSISVCPRLHSGQF*VWLQCAARQSSRTH
Trigger: ATGTGTCCTTGAAGACTGTCTTGCAGCACATTGAAGCCACACCAAAAATTGTCCACTATGCAATCTTGGGCATACAGAAATGGAGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580384.1
ENST00000580732.6
CDS TCA 72 bp GAAATGACACTCGTTAGTTCCACATGGGAGTTGTCATaGACTAGCACAAACAGTGTGTACGGGTTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: EMTLVSSTWELS*TSTNSVYGFCF
Trigger: GAAACAGAACCCGTACACACTGTTTGTGCTAGTTCATGACAACTCCCATGTGGAACTAACGAGTGTCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580732.6
CDS CCA 72 bp GTTCACAGTGGTGAAAGGTGTTATAGGCTGCATATTTaGTCAGCATTATGGATACAGTTTCCCGTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: VHSGERCYRLHI*SALWIQFPVSW
Trigger: CCAGGAAACGGGAAACTGTATCCATAATGCTGACCAAATATGCAGCCTATAACACCTTTCACCACTGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CAA 90 bp ACACTGAGCACCTATCTGCAGGGCTCTTTCTCTCAGAGTAAATTCTaGCATAGCTTTCAGCATAATTTGCTCAAATTCTTCCCTGAGAGG +
Preference number: 6 (lower is better)
Translates to: TLSTYLQGSFSQSKF*HSFQHNLLKFFPER
Trigger: CCTCTCAGGGAAGAATTTGAGCAAATTATGCTGAAAGCTATGCAAGAATTTACTCTGAGAGAAAGAGCCCTGCAGATAGGTGCTCAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS CAA 90 bp GCCAGTGTTGCCAAATCTTACAACCACTCACCTAATGATGTGGTTTaGAAATGTGATGCCAGGAAACTGACCTTTCCTGTGATAAGCTCA +
Preference number: 6 (lower is better)
Translates to: ASVAKSYNHSPNDVV*KCDARKLTFPVISS
Trigger: TGAGCTTATCACAGGAAAGGTCAGTTTCCTGGCATCACATTTCAAAACCACATCATTAGGTGAGTGGTTGTAAGATTTGGCAACACTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580683.1
CDS TCA 72 bp AGTGGTTTCACAACATTGTTATTCCGGGTCAGGTCCTaGGCTCCACTTAAATTGATTGCAGAATTAGCTGGA +
Preference number: 6 (lower is better)
Translates to: SGFTTLLFRVRS*APLKLIAELAG
Trigger: TCCAGCTAATTCTGCAATCAATTTAAGTGGAGCTCAGGACCTGACCCGGAATAACAATGTTGTGAAACCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579454.1
CDS CAA 72 bp GCCAAATCTTACAACCACTCACCTAATGATGTGGTTTaGAAATGTGATGCCAGGAAACTGACCTTTCCTGTG +
Preference number: 6 (lower is better)
Translates to: AKSYNHSPNDVV*KCDARKLTFPV
Trigger: CACAGGAAAGGTCAGTTTCCTGGCATCACATTTCAAAACCACATCATTAGGTGAGTGGTTGTAAGATTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580683.1
CDS TCA 72 bp GAATCCTGCTGGGATGTCAATTTGTTCCATACACAGTaGTACCAAACGCAAATCCTTTCCTGCTTGACAAAA +
Preference number: 6 (lower is better)
Translates to: ESCWDVNLFHTQ*YQTQILSCLTK
Trigger: TTTTGTCAAGCAGGAAAGGATTTGCGTTTGGTATCACTGTGTATGGAACAAATTGACATCCCAGCAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS GCA 72 bp TCAAAGACCTGGGAAAGGTTTCTCCAAGAGGATCTTTaGCAGTTAATATCACAATACAAGGTAGACCGTCTA +
Preference number: 6 (lower is better)
Translates to: SKTWERFLQEDL*QLISQYKVDRL
Trigger: TAGACGGTCTACCTTGTATTGTGATATTAACTGGCAAAGATCCTCTTGGAGAAACCTTTCCCAGGTCTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CCA 72 bp TTTCTGTATGCCCAAGATTGCATAGTGGACAATTTTTaGTGTGGCTTCAATGTGCTGCAAGACAGTCTTCAA +
Preference number: 6 (lower is better)
Translates to: FLYAQDCIVDNF*CGFNVLQDSLQ
Trigger: TTGAAGACTGTCTTGCAGCACATTGAAGCCACACCAAAAATTGTCCACTATGCAATCTTGGGCATACAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580384.1
ENST00000580732.6
CDS CAA 72 bp TTCAAAGACCTGGGAAAGGTTTCTCCAAGAGGATCTTaGCCAGTTAATATCACAATACAAGGTAGACCGTCT +
Preference number: 6 (lower is better)
Translates to: FKDLGKVSPRGS*PVNITIQGRPS
Trigger: AGACGGTCTACCTTGTATTGTGATATTAACTGGCAAAGATCCTCTTGGAGAAACCTTTCCCAGGTCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CAA 72 bp ATTTCTGTATGCCCAAGATTGCATAGTGGACAATTTTaGGTGTGGCTTCAATGTGCTGCAAGACAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: ISVCPRLHSGQF*VWLQCAARQSS
Trigger: TGAAGACTGTCTTGCAGCACATTGAAGCCACACCAAAAATTGTCCACTATGCAATCTTGGGCATACAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000580384.1
ENST00000580732.6
CDS CAA 72 bp GGATGGCATGATCTTTGGTTTAATGATAAAGTCCCTTaGCCCTCCAACCTGAACATGTTTCTTCATGAGACT +
Preference number: 6 (lower is better)
Translates to: GWHDLWFNDKVP*PSNLNMFLHET
Trigger: AGTCTCATGAAGAAACATGTTCAGGTTGGAGGGCAAAGGGACTTTATCATTAAACCAAAGATCATGCCATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580384.1
CDS GCA 72 bp CCTATCTGCAGGGCTCTTTCTCTCAGAGTAAATTCTTaGATAGCTTTCAGCATAATTTGCTCAAATTCTTCC +
Preference number: 6 (lower is better)
Translates to: PICRALSLRVNS*IAFSIICSNSS
Trigger: GGAAGAATTTGAGCAAATTATGCTGAAAGCTATGCAAGAATTTACTCTGAGAGAAAGAGCCCTGCAGATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5
CDS CCA 72 bp GTTAATATCACAATACAAGGTAGACCGTCTAAATCTTaGTATGTCCGAGGGATCCACTCTTCTGGTTCATTT +
Preference number: 6 (lower is better)
Translates to: VNITIQGRPSKS*YVRGIHSSGSF
Trigger: AAATGAACCAGAAGAGTGGATCCCTCGGACATACCAAGATTTAGACGGTCTACCTTGTATTGTGATATTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS CCA 72 bp ATTTGGTCAGCATTATGGATACAGTTTCCCGTTTCCTaGGCTCTTCAACTTTGGATTCCTTTATCACTTCTT +
Preference number: 6 (lower is better)
Translates to: IWSALWIQFPVS*ALQLWIPLSLL
Trigger: AAGAAGTGATAAAGGAATCCAAAGTTGAAGAGCCCAGGAAACGGGAAACTGTATCCATAATGCTGACCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578955.1
ENST00000580732.6
CDS GCA 72 bp TCAGAAGAATCATGTTTTCCACGCTCAGAAATTGGCTaGCGGTCAACCCTAATTTTTCCAAATCTTTGTTTT +
Preference number: 6 (lower is better)
Translates to: SEESCFPRSEIG*RSTLIFPNLCF
Trigger: AAAACAAAGATTTGGAAAAATTAGGGTTGACCGGCAGCCAATTTCTGAGCGTGGAAAACATGATTCTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269218.10
ENST00000424526.6
ENST00000578368.5
ENST00000580732.6
ENST00000584446.5