RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GRAPLDR (Homo sapiens)

Ensembl gene IDs: ENSG00000262292

Ensembl transcript IDs: ENST00000572818.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GGTGTGGGCATGATTCATAGGCATTTTCTGGCCTCCAGAGCCCCTTaGTTGACGGAAGAGGCAGGAACAGCTTCTGATGATTCTAACCCA +
Preference number: 5 (lower is better)
Translates to: GVGMIHRHFLASRAP*LTEEAGTASDDSNP
Trigger: TGGGTTAGAATCATCAGAAGCTGTTCCTGCCTCTTCCGTCAAGCAAGGGGCTCTGGAGGCCAGAAAATGCCTATGAATCATGCCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572818.2
CDS TCA 90 bp GTAAAGTGCTATCCCCCGAGTAGCCTTGATGCACAACTGACCTGGTaGGAGTTAGTGATAAACAGTTCTGCATCATCGCCCAAGGTTCCC +
Preference number: 5 (lower is better)
Translates to: VKCYPPSSLDAQLTW*ELVINSSASSPKVP
Trigger: GGGAACCTTGGGCGATGATGCAGAACTGTTTATCACTAACTCTCACCAGGTCAGTTGTGCATCAAGGCTACTCGGGGGATAGCACTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572818.2
CDS CCA 72 bp GCTAAGCTTGAGCACCTGAGGACCAGCGACTCTGCCTaGGGGCTTCATCCAGCAGCTGCAGCCTGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: AKLEHLRTSDSA*GLHPAAAACWP
Trigger: GGGCCAGCAGGCTGCAGCTGCTGGATGAAGCCCCCAGGCAGAGTCGCTGGTCCTCAGGTGCTCAAGCTTAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572818.2
CDS TCA 72 bp CAGCAACCTGAAGGCTTCCAGCTAAGCTTGAGCACCTaGGGACCAGCGACTCTGCCTGGGGGCTTCATCCAG +
Preference number: 6 (lower is better)
Translates to: QQPEGFQLSLST*GPATLPGGFIQ
Trigger: CTGGATGAAGCCCCCAGGCAGAGTCGCTGGTCCTCAGGTGCTCAAGCTTAGCTGGAAGCCTTCAGGTTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572818.2
CDS TCA 72 bp TCCTCTGGGTACTCACTATTCCATTGCACAGCAACCTaGAGGCTTCCAGCTAAGCTTGAGCACCTGAGGACC +
Preference number: 6 (lower is better)
Translates to: SSGYSLFHCTAT*RLPAKLEHLRT
Trigger: GGTCCTCAGGTGCTCAAGCTTAGCTGGAAGCCTTCAGGTTGCTGTGCAATGGAATAGTGAGTACCCAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572818.2
CDS CAA 90 bp GTGGGCATGATTCATAGGCATTTTCTGGCCTCCAGAGCCCCTTGCTaGACGGAAGAGGCAGGAACAGCTTCTGATGATTCTAACCCAGTG +
Preference number: 6 (lower is better)
Translates to: VGMIHRHFLASRAPC*TEEAGTASDDSNPV
Trigger: CACTGGGTTAGAATCATCAGAAGCTGTTCCTGCCTCTTCCGTCAAGCAAGGGGCTCTGGAGGCCAGAAAATGCCTATGAATCATGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572818.2
CDS TCA 72 bp TTCATAGGCATTTTCTGGCCTCCAGAGCCCCTTGCTTaGCGGAAGAGGCAGGAACAGCTTCTGATGATTCTA +
Preference number: 6 (lower is better)
Translates to: FIGIFWPPEPLA*RKRQEQLLMIL
Trigger: TAGAATCATCAGAAGCTGTTCCTGCCTCTTCCGTCAAGCAAGGGGCTCTGGAGGCCAGAAAATGCCTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572818.2
CDS GCA 72 bp ATGATTCATAGGCATTTTCTGGCCTCCAGAGCCCCTTaGTTGACGGAAGAGGCAGGAACAGCTTCTGATGAT +
Preference number: 6 (lower is better)
Translates to: MIHRHFLASRAP*LTEEAGTASDD
Trigger: ATCATCAGAAGCTGTTCCTGCCTCTTCCGTCAAGCAAGGGGCTCTGGAGGCCAGAAAATGCCTATGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572818.2
CDS CAA 72 bp ATTCATAGGCATTTTCTGGCCTCCAGAGCCCCTTGCTaGACGGAAGAGGCAGGAACAGCTTCTGATGATTCT +
Preference number: 6 (lower is better)
Translates to: IHRHFLASRAPC*TEEAGTASDDS
Trigger: AGAATCATCAGAAGCTGTTCCTGCCTCTTCCGTCAAGCAAGGGGCTCTGGAGGCCAGAAAATGCCTATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572818.2
CDS CAA 72 bp GCTGTCCATAGTGTTATGTGCTCATTCCCATACCCTTaGTTGGCTCCTTCCCTTCCCTGTATCATTTTCCTG +
Preference number: 6 (lower is better)
Translates to: AVHSVMCSFPYP*LAPSLPCIIFL
Trigger: CAGGAAAATGATACAGGGAAGGGAAGGAGCCAACAAAGGGTATGGGAATGAGCACATAACACTATGGACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572818.2
CDS CCA 72 bp ATTCTTGGGATCTCATTCAAGCCAAAAACCTTGCACTaGAATATTTTTCCGGACTGGGCTTCTGAGGGTAGC +
Preference number: 6 (lower is better)
Translates to: ILGISFKPKTLH*NIFPDWASEGS
Trigger: GCTACCCTCAGAAGCCCAGTCCGGAAAAATATTCCAGTGCAAGGTTTTTGGCTTGAATGAGATCCCAAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572818.2
CDS CAA 72 bp AAGGTGATTCTTGGGATCTCATTCAAGCCAAAAACCTaGCACTGGAATATTTTTCCGGACTGGGCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: KVILGISFKPKT*HWNIFPDWASE
Trigger: CTCAGAAGCCCAGTCCGGAAAAATATTCCAGTGCAAGGTTTTTGGCTTGAATGAGATCCCAAGAATCACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572818.2