Pregenerated sensors for GRAPLDR (Homo sapiens)
Ensembl gene IDs: ENSG00000262292Ensembl transcript IDs: ENST00000572818.2
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | GGTGTGGGCATGATTCATAGGCATTTTCTGGCCTCCAGAGCCCCTTaGTTGACGGAAGAGGCAGGAACAGCTTCTGATGATTCTAACCCA | + |
Preference number: 5 (lower is better) Translates to: GVGMIHRHFLASRAP*LTEEAGTASDDSNP Trigger: TGGGTTAGAATCATCAGAAGCTGTTCCTGCCTCTTCCGTCAAGCAAGGGGCTCTGGAGGCCAGAAAATGCCTATGAATCATGCCCACACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572818.2 |
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CDS TCA 90 bp | GTAAAGTGCTATCCCCCGAGTAGCCTTGATGCACAACTGACCTGGTaGGAGTTAGTGATAAACAGTTCTGCATCATCGCCCAAGGTTCCC | + |
Preference number: 5 (lower is better) Translates to: VKCYPPSSLDAQLTW*ELVINSSASSPKVP Trigger: GGGAACCTTGGGCGATGATGCAGAACTGTTTATCACTAACTCTCACCAGGTCAGTTGTGCATCAAGGCTACTCGGGGGATAGCACTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000572818.2 |
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CDS CCA 72 bp | GCTAAGCTTGAGCACCTGAGGACCAGCGACTCTGCCTaGGGGCTTCATCCAGCAGCTGCAGCCTGCTGGCCC | + |
Preference number: 6 (lower is better) Translates to: AKLEHLRTSDSA*GLHPAAAACWP Trigger: GGGCCAGCAGGCTGCAGCTGCTGGATGAAGCCCCCAGGCAGAGTCGCTGGTCCTCAGGTGCTCAAGCTTAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572818.2 |
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CDS TCA 72 bp | CAGCAACCTGAAGGCTTCCAGCTAAGCTTGAGCACCTaGGGACCAGCGACTCTGCCTGGGGGCTTCATCCAG | + |
Preference number: 6 (lower is better) Translates to: QQPEGFQLSLST*GPATLPGGFIQ Trigger: CTGGATGAAGCCCCCAGGCAGAGTCGCTGGTCCTCAGGTGCTCAAGCTTAGCTGGAAGCCTTCAGGTTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000572818.2 |
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CDS TCA 72 bp | TCCTCTGGGTACTCACTATTCCATTGCACAGCAACCTaGAGGCTTCCAGCTAAGCTTGAGCACCTGAGGACC | + |
Preference number: 6 (lower is better) Translates to: SSGYSLFHCTAT*RLPAKLEHLRT Trigger: GGTCCTCAGGTGCTCAAGCTTAGCTGGAAGCCTTCAGGTTGCTGTGCAATGGAATAGTGAGTACCCAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572818.2 |
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CDS CAA 90 bp | GTGGGCATGATTCATAGGCATTTTCTGGCCTCCAGAGCCCCTTGCTaGACGGAAGAGGCAGGAACAGCTTCTGATGATTCTAACCCAGTG | + |
Preference number: 6 (lower is better) Translates to: VGMIHRHFLASRAPC*TEEAGTASDDSNPV Trigger: CACTGGGTTAGAATCATCAGAAGCTGTTCCTGCCTCTTCCGTCAAGCAAGGGGCTCTGGAGGCCAGAAAATGCCTATGAATCATGCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572818.2 |
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CDS TCA 72 bp | TTCATAGGCATTTTCTGGCCTCCAGAGCCCCTTGCTTaGCGGAAGAGGCAGGAACAGCTTCTGATGATTCTA | + |
Preference number: 6 (lower is better) Translates to: FIGIFWPPEPLA*RKRQEQLLMIL Trigger: TAGAATCATCAGAAGCTGTTCCTGCCTCTTCCGTCAAGCAAGGGGCTCTGGAGGCCAGAAAATGCCTATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572818.2 |
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CDS GCA 72 bp | ATGATTCATAGGCATTTTCTGGCCTCCAGAGCCCCTTaGTTGACGGAAGAGGCAGGAACAGCTTCTGATGAT | + |
Preference number: 6 (lower is better) Translates to: MIHRHFLASRAP*LTEEAGTASDD Trigger: ATCATCAGAAGCTGTTCCTGCCTCTTCCGTCAAGCAAGGGGCTCTGGAGGCCAGAAAATGCCTATGAATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572818.2 |
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CDS CAA 72 bp | ATTCATAGGCATTTTCTGGCCTCCAGAGCCCCTTGCTaGACGGAAGAGGCAGGAACAGCTTCTGATGATTCT | + |
Preference number: 6 (lower is better) Translates to: IHRHFLASRAPC*TEEAGTASDDS Trigger: AGAATCATCAGAAGCTGTTCCTGCCTCTTCCGTCAAGCAAGGGGCTCTGGAGGCCAGAAAATGCCTATGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000572818.2 |
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CDS CAA 72 bp | GCTGTCCATAGTGTTATGTGCTCATTCCCATACCCTTaGTTGGCTCCTTCCCTTCCCTGTATCATTTTCCTG | + |
Preference number: 6 (lower is better) Translates to: AVHSVMCSFPYP*LAPSLPCIIFL Trigger: CAGGAAAATGATACAGGGAAGGGAAGGAGCCAACAAAGGGTATGGGAATGAGCACATAACACTATGGACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572818.2 |
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CDS CCA 72 bp | ATTCTTGGGATCTCATTCAAGCCAAAAACCTTGCACTaGAATATTTTTCCGGACTGGGCTTCTGAGGGTAGC | + |
Preference number: 6 (lower is better) Translates to: ILGISFKPKTLH*NIFPDWASEGS Trigger: GCTACCCTCAGAAGCCCAGTCCGGAAAAATATTCCAGTGCAAGGTTTTTGGCTTGAATGAGATCCCAAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000572818.2 |
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CDS CAA 72 bp | AAGGTGATTCTTGGGATCTCATTCAAGCCAAAAACCTaGCACTGGAATATTTTTCCGGACTGGGCTTCTGAG | + |
Preference number: 6 (lower is better) Translates to: KVILGISFKPKT*HWNIFPDWASE Trigger: CTCAGAAGCCCAGTCCGGAAAAATATTCCAGTGCAAGGTTTTTGGCTTGAATGAGATCCCAAGAATCACCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000572818.2 |