RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPX5 (Homo sapiens)

Ensembl gene IDs: ENSG00000224586, ENSG00000257770

Ensembl transcript IDs: ENST00000412168.7, ENST00000442674.6, ENST00000469384.1, ENST00000483784.1, ENST00000550775.5, ENST00000551639.1

Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTTGCTCCCACAGGAGAATGGCTGGTAGGGGGAGGTGTCATGGATaGAAACTGAGCCAAAACAGTTGGAAACTGATGATACACGTTTGT +
Preference number: 1 (lower is better)
Translates to: SCSHRRMAGRGRCHG*KLSQNSWKLMIHVC
Trigger: ACAAACGTGTATCATCAGTTTCCAACTGTTTTGGCTCAGTTTTCATCCATGACACCTCCCCCTACCAGCCATTCTCCTGTGGGAGCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR TCA 90 bp AGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGGATGTaGTGGCCGACTGAACCATTGTCGTGGAAGGATGATTTCCCTCTG +
Preference number: 1 (lower is better)
Translates to: REMEESECLGMFFRM*WPTEPLSWKDDFPL
Trigger: CAGAGGGAAATCATCCTTCCACGACAATGGTTCAGTCGGCCATCACATCCTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR CCA 90 bp AGTAGCCTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTaGCAGTATGTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGA +
Preference number: 1 (lower is better)
Translates to: SSLPNINLVCGEWEF*QYVAVIYSGGAHAG
Trigger: TCCTGCATGGGCTCCACCTGAGTAAATCACCGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAGGCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp AGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCCCGATGTCTGTCTTGACTaGGCTGACCGTAGCCCGGTG +
Preference number: 2 (lower is better)
Translates to: SGRARSEGEESRVEMGNPDVCLD*ADRSPV
Trigger: CACCGGGCTACGGTCAGCTCAGTCAAGACAGACATC...GGGATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551639.1
3UTR-3UTR CCA 90 bp GCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGGCTCCCACAGGAGAATaGCTGGTAGGGGGAGGTGTC +
Preference number: 2 (lower is better)
Translates to: AAENILLETVAGLVLKVRAPTGE*LVGGGV
Trigger: GACACCTCCCCCTACCAGCCATTCTCCTGTGGGAGC...CCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp GTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTGAGAAGGAGCAAGTCATTAGGTaGGAAGTAGGGTTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: VAVIYSGGAHAGRECGEKEQVIR*EVGLLL
Trigger: CAGGAGCAACCCTACTTCTCACCTAATGACTTGCTC...CTTCTCACCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp GCAGTATGTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGGGTGATTTACTCAGGTaGAGCCCATGCAGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: AVCGGDLLRWSPCRKRVWGDLLR*SPCRKR
Trigger: TCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACC...CCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCACATACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp GATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGGGCAGTATGTGGCGGTaGTTTACTCAGGTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: DAAENILLETVAGLVLKVGSMWR*FTQVEP
Trigger: GGGCTCCACCTGAGTAAATCACCGCCACATACTGCC...CACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp GTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTGAGAAGAAAATCTCAGAGGGATaGGGACAGGAGTGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: VAVIYSGGAHAGRECGEKKISEG*GQECFK
Trigger: CTTGAAGCACTCCTGTCCTCATCCCTCTGAGATTTT...CTTCTCACCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551639.1
3UTR-3UTR TCA 90 bp TTCTACACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTGGTGGGACCAGCGCATaGCAGGGATTCCATCAGGCC +
Preference number: 2 (lower is better)
Translates to: FYTSRVERDGRVRMSRNVGGTSA*QGFHQA
Trigger: GGCCTGATGGAATCCCTGTCATGCGCTGGTCCCACC...AACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGTGTAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551639.1
3UTR-3UTR TCA 90 bp TGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAAGGCAGTATGTGGCGGTaGTTTACTCAGGTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: CRKHFIGDSGRARSEGEEGSMWR*FTQVEP
Trigger: GGGCTCCACCTGAGTAAATCACCGCCACATACTGCC...TTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp TTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGGGTGATTTACTCAGGTaGAGCCCATGCAGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: FIGDSGRARSEGEESRVEGDLLR*SPCRKR
Trigger: TCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACC...CTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp TTGAAGCAATGTTCTTGCTCCCACAGGAGAATGGCTGGTAGGGGGAGGTGTCATATGTTCTTCAGGATGTaGTGGCCGACTGAACCATTG +
Preference number: 2 (lower is better)
Translates to: LKQCSCSHRRMAGRGRCHMFFRM*WPTEPL
Trigger: CAATGGTTCAGTCGGCCATCACATCCTGAAGAACAT...ATGACACCTCCCCCTACCAGCCATTCTCCTGTGGGAGCAAGAACATTGCTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp CGATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGCAAGTCATTAGGTaGGAAGTAGGGTTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: RCCRKHFIGDSGRARSEGEQVIR*EVGLLL
Trigger: CAGGAGCAACCCTACTTCTCACCTAATGACTTGCTC...ACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp ACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCTCCCTCTGGTGGATATaGATGATTCAACCTGTAACA +
Preference number: 2 (lower is better)
Translates to: TVAGLVLKVRNPGLRWEISLWWI*MIQPVT
Trigger: TGTTACAGGTTGAATCATTCATATCCACCAGAGGGA...GATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp CCGACTGAACCATTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATGATGTGATGGCCGACTaGACCATTGTCGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: PTEPLSWKDDFPLVDMNDDVMAD*TIVVEG
Trigger: TCCTTCCACGACAATGGTTCAGTCGGCCATCACATC...ATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAATGGTTCAGTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp GATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGGGAGAGTGGGAATTCTaGCAGTATGTGGCGGTGATT +
Preference number: 2 (lower is better)
Translates to: DAAENILLETVAGLVLKVGEWEF*QYVAVI
Trigger: AATCACCGCCACATACTGCCAGAATTCCCACTCTCC...CACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp CGATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGCCAGAGATAGGTTTTaGGTCCCACAAGCATGGAGA +
Preference number: 2 (lower is better)
Translates to: RCCRKHFIGDSGRARSEGARDRF*VPQAWR
Trigger: TCTCCATGCTTGTGGGACCCAAAACCTATCTCTGGC...ACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp GCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGATTGTCGTGGAAGGATaGTTTCCCTCTGGTGGATAT +
Preference number: 2 (lower is better)
Translates to: AAENILLETVAGLVLKVRIVVEG*FPSGGY
Trigger: ATATCCACCAGAGGGAAATCATCCTTCCACGACAAT...CCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp GAACCATTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATTCAACCGAGCAAGTCATTAGGTaGGAAGTAGGGTTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: EPLSWKDDFPLVDMNDSTEQVIR*EVGLLL
Trigger: CAGGAGCAACCCTACTTCTCACCTAATGACTTGCTC...GGTTGAATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAATGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp CCTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGATGTGATGGCCGACTaGACCATTGTCGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: PSKYKSSLWRVGILAVCGDVMAD*TIVVEG
Trigger: TCCTTCCACGACAATGGTTCAGTCGGCCATCACATC...GCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp GAACCATTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATTCAACCGGTGATTTACTCAGGTaGAGCCCATGCAGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: EPLSWKDDFPLVDMNDSTGDLLR*SPCRKR
Trigger: TCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACC...GGTTGAATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAATGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp CAGAGGTCTGGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCACCCACATACTCGGAGAGTGGGAATTCTaGCAGTATGTGGCGGTGATT +
Preference number: 2 (lower is better)
Translates to: QRSGDFRFPFVSVFTHILGEWEF*QYVAVI
Trigger: AATCACCGCCACATACTGCCAGAATTCCCACTCTCC...GAGTATGTGGGTGAAGACTGAAACAAATGGAAACCTAAAATCCCCAGACCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp GATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGACTGAACCATTGTCGTaGAAGGATGATTTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: DAAENILLETVAGLVLKVTEPLS*KDDFPL
Trigger: CAGAGGGAAATCATCCTTCCACGACAATGGTTCAGT...CACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp ACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGATTGTCGTGGAAGGATaGTTTCCCTCTGGTGGATAT +
Preference number: 2 (lower is better)
Translates to: TSRVERDGRVRMSRNVLQIVVEG*FPSGGY
Trigger: ATATCCACCAGAGGGAAATCATCCTTCCACGACAAT...CTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp GCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGCTGAGCCAAAACAGTTaGAAACTGATGATACACGTT +
Preference number: 2 (lower is better)
Translates to: AAENILLETVAGLVLKVRLSQNS*KLMIHV
Trigger: AACGTGTATCATCAGTTTCCAACTGTTTTGGCTCAG...CCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp CCTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCTTCCAACGGATGTCATaGACCTTTACAGGGTCCCAG +
Preference number: 2 (lower is better)
Translates to: PSKYKSSLWRVGILAVCGFQRMS*TFTGSQ
Trigger: CTGGGACCCTGTAAAGGTCCATGACATCCGTTGGAA...GCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551639.1
3UTR-3UTR TCA 90 bp TTCTACACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTTCCCTCTGGTGGATATaGATGATTCAACCTGTAACA +
Preference number: 2 (lower is better)
Translates to: FYTSRVERDGRVRMSRNVSLWWI*MIQPVT
Trigger: TGTTACAGGTTGAATCATTCATATCCACCAGAGGGA...AACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGTGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp CCGACTGAACCATTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATCTGAGCCAAAACAGTTaGAAACTGATGATACACGTT +
Preference number: 2 (lower is better)
Translates to: PTEPLSWKDDFPLVDMNDLSQNS*KLMIHV
Trigger: AACGTGTATCATCAGTTTCCAACTGTTTTGGCTCAG...ATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAATGGTTCAGTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp TGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATATAAATCTAGTTTGTaGAGAGTGGGAATTCTGGCA +
Preference number: 2 (lower is better)
Translates to: CRKHFIGDSGRARSEGEEYKSSL*RVGILA
Trigger: TGCCAGAATTCCCACTCTCCACAAACTAGATTTATA...TTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp TTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATTCAACCTGTAACCTTCCTATTTGGTTTTaGATTGCTTCAAGTACGCCA +
Preference number: 2 (lower is better)
Translates to: LSWKDDFPLVDMNDSTCNLPIWF*IASSTP
Trigger: TGGCGTACTTGAAGCAATTCAAAACCAAATAGGAAG...GTTACAGGTTGAATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551639.1
3UTR-3UTR TCA 90 bp AAAAATGTTATGAAGTGGAACCTAAATTGTGTGACTGTGACCCCATTGCTATTTGGGAGGTGTCATGGATaGAAACTGAGCCAAAACAGT +
Preference number: 2 (lower is better)
Translates to: KNVMKWNLNCVTVTPLLFGRCHG*KLSQNS
Trigger: ACTGTTTTGGCTCAGTTTTCATCCATGACACCTCCC...AAATAGCAATGGGGTCACAGTCACACAATTTAGGTTCCACTTCATAACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp TGGAAGGATGATTTCCCTCTGGTGGATATGAATGATTCAACCTGTAACAGAGGTTATAAATCTAGTTTGTaGAGAGTGGGAATTCTGGCA +
Preference number: 2 (lower is better)
Translates to: WKDDFPLVDMNDSTCNRGYKSSL*RVGILA
Trigger: TGCCAGAATTCCCACTCTCCACAAACTAGATTTATA...ACCTCTGTTACAGGTTGAATCATTCATATCCACCAGAGGGAAATCATCCTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR TCA 90 bp AAAAATGTTATGAAGTGGAACCTAAATTGTGTGACTGTGACCCCATTGCTATTTATTGTCGTGGAAGGATaGTTTCCCTCTGGTGGATAT +
Preference number: 2 (lower is better)
Translates to: KNVMKWNLNCVTVTPLLFIVVEG*FPSGGY
Trigger: ATATCCACCAGAGGGAAATCATCCTTCCACGACAAT...AAATAGCAATGGGGTCACAGTCACACAATTTAGGTTCCACTTCATAACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CCA 90 bp TTTCCATTTGTTTCAGTCTTCACCCACATACTCTTGAGAGGCAAAAGAGCAGTATATAAATCTAGTTTGTaGAGAGTGGGAATTCTGGCA +
Preference number: 2 (lower is better)
Translates to: FPFVSVFTHILLRGKRAVYKSSL*RVGILA
Trigger: TGCCAGAATTCCCACTCTCCACAAACTAGATTTATA...TACTGCTCTTTTGCCTCTCAAGAGTATGTGGGTGAAGACTGAAACAAATGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CAA 90 bp GTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCCCATGGCCGACTGAACCATaGTCGTGGAAGGATGATTTC +
Preference number: 3 (lower is better)
Translates to: VAGLVLKVRNPGLRWEIPWPTEP*SWKDDF
Trigger: GAAATCATCCTTCCACGACAATGGTTCAGTCGGCCA...TGGGATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CAA 90 bp AGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCCCTTCACCCACATACTCTaGAGAGGCAAAAGAGCAGTA +
Preference number: 3 (lower is better)
Translates to: SGRARSEGEESRVEMGNPFTHIL*RGKRAV
Trigger: TACTGCTCTTTTGCCTCTCAAGAGTATGTGGGTGAA...GGGATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CAA 90 bp ACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCGAAGTGGAACCTAAATaGTGTGACTGTGACCCCATT +
Preference number: 3 (lower is better)
Translates to: TVAGLVLKVRNPGLRWEIEVEPK*CDCDPI
Trigger: AATGGGGTCACAGTCACACAATTTAGGTTCCACTTC...GATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CAA 90 bp TTGAAGCAATGTTCTTGCTCCCACAGGAGAATGGCTGGTAGGGGGAGGTGTCATGAAGTGGAACCTAAATaGTGTGACTGTGACCCCATT +
Preference number: 3 (lower is better)
Translates to: LKQCSCSHRRMAGRGRCHEVEPK*CDCDPI
Trigger: AATGGGGTCACAGTCACACAATTTAGGTTCCACTTC...ATGACACCTCCCCCTACCAGCCATTCTCCTGTGGGAGCAAGAACATTGCTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CAA 90 bp CATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTTTCACCCACATACTCTaGAGAGGCAAAAGAGCAGTA +
Preference number: 3 (lower is better)
Translates to: HFIGDSGRARSEGEESRVFTHIL*RGKRAV
Trigger: TACTGCTCTTTTGCCTCTCAAGAGTATGTGGGTGAA...AACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CAA 90 bp ATGGAGATGCCCTCTCTTCTTTTGAAGCAATGTTCTTGCTCCCACAGGAGAATGTGGCCGACTGAACCATaGTCGTGGAAGGATGATTTC +
Preference number: 3 (lower is better)
Translates to: MEMPSLLLKQCSCSHRRMWPTEP*SWKDDF
Trigger: GAAATCATCCTTCCACGACAATGGTTCAGTCGGCCA...CATTCTCCTGTGGGAGCAAGAACATTGCTTCAAAAGAAGAGAGGGCATCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CAA 90 bp GATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGGAAGTGGAACCTAAATaGTGTGACTGTGACCCCATT +
Preference number: 3 (lower is better)
Translates to: DAAENILLETVAGLVLKVEVEPK*CDCDPI
Trigger: AATGGGGTCACAGTCACACAATTTAGGTTCCACTTC...CACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CAA 90 bp TTGAAGCAATGTTCTTGCTCCCACAGGAGAATGGCTGGTAGGGGGAGGTGTCATTCCCAGGATATAGATTaGAATGTGCCCAAAATCTCA +
Preference number: 3 (lower is better)
Translates to: LKQCSCSHRRMAGRGRCHSQDID*NVPKIS
Trigger: TGAGATTTTGGGCACATTCAAATCTATATCCTGGGA...ATGACACCTCCCCCTACCAGCCATTCTCCTGTGGGAGCAAGAACATTGCTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551639.1
3UTR TCA 72 bp GAAGAGTCAGAATGTCTAGGAATGTTCTTCAGGATGTaGTGGCCGACTGAACCATTGTCGTGGAAGGATGAT +
Preference number: 3 (lower is better)
Translates to: EESECLGMFFRM*WPTEPLSWKDD
Trigger: ATCATCCTTCCACGACAATGGTTCAGTCGGCCATCACATCCTGAAGAACATTCCTAGACATTCTGACTCTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR CCA 72 bp CCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTaGCAGTATGTGGCGGTGATTTACTCAGGTGGAGCC +
Preference number: 3 (lower is better)
Translates to: PNINLVCGEWEF*QYVAVIYSGGA
Trigger: GGCTCCACCTGAGTAAATCACCGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CAA 90 bp CTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGTTCACCCACATACTCTaGAGAGGCAAAAGAGCAGTA +
Preference number: 3 (lower is better)
Translates to: LPNINLVCGEWEFWQYVAFTHIL*RGKRAV
Trigger: TACTGCTCTTTTGCCTCTCAAGAGTATGTGGGTGAA...CGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR-3UTR CAA 90 bp TGGAAGGATGATTTCCCTCTGGTGGATATGAATGATTCAACCTGTAACAGAGGTACTGAGCCAAAACAGTaGGAAACTGATGATACACGT +
Preference number: 3 (lower is better)
Translates to: WKDDFPLVDMNDSTCNRGTEPKQ*ETDDTR
Trigger: ACGTGTATCATCAGTTTCCAACTGTTTTGGCTCAGT...ACCTCTGTTACAGGTTGAATCATTCATATCCACCAGAGGGAAATCATCCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
3UTR TCA 72 bp GATATAGATTTGAATGTGCCCAAAATCTCAGAGGGATaGGGACAGGAGTGCTTCAAGAAACTGAAGACTTTC +
Preference number: 3 (lower is better)
Translates to: DIDLNVPKISEG*GQECFKKLKTF
Trigger: GAAAGTCTTCAGTTTCTTGAAGCACTCCTGTCCTCATCCCTCTGAGATTTTGGGCACATTCAAATCTATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR TCA 90 bp GTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTGAGAAGGGTGGGACCAGCGCATaGCAGGGATTCCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: VAVIYSGGAHAGRECGEKGGTSA*QGFHQA
Trigger: GGCCTGATGGAATCCCTGTCATGCGCTGGTCCCACC...CTTCTCACCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp GTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCCCAGATGTCTGTCTTGACTaGGCTGACCGTAGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: VAGLVLKVRNPGLRWEIPDVCLD*ADRSPV
Trigger: CACCGGGCTACGGTCAGCTCAGTCAAGACAGACATC...TGGGATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGCTGACCGTAGCCCGGTaGGACCAGCGCATGACAGGG +
Preference number: 4 (lower is better)
Translates to: AAENILLETVAGLVLKVRLTVAR*DQRMTG
Trigger: CCCTGTCATGCGCTGGTCCCACCGGGCTACGGTCAG...CCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp TTGAAGCAATGTTCTTGCTCCCACAGGAGAATGGCTGGTAGGGGGAGGTGTCATGCTCCCACAGGAGAATaGCTGGTAGGGGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LKQCSCSHRRMAGRGRCHAPTGE*LVGGGV
Trigger: GACACCTCCCCCTACCAGCCATTCTCCTGTGGGAGC...ATGACACCTCCCCCTACCAGCCATTCTCCTGTGGGAGCAAGAACATTGCTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp GATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGGCTAGTCTGGGGGCCTaGGGTCTTTGCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: DAAENILLETVAGLVLKVASLGA*GLCPPL
Trigger: CAGAGGTGGGCAAAGACCTCAGGCCCCCAGACTAGC...CACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412168.7
CDS-3UTR TCA 90 bp GTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTGAGAAGGATGTGATGGCCGACTaGACCATTGTCGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VAVIYSGGAHAGRECGEKDVMAD*TIVVEG
Trigger: TCCTTCCACGACAATGGTTCAGTCGGCCATCACATC...CTTCTCACCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp ACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGCTGACCGTAGCCCGGTaGGACCAGCGCATGACAGGG +
Preference number: 4 (lower is better)
Translates to: TSRVERDGRVRMSRNVLQLTVAR*DQRMTG
Trigger: CCCTGTCATGCGCTGGTCCCACCGGGCTACGGTCAG...CTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp CGGATGTCATGGACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAGGTGGGACCAGCGCATaGCAGGGATTCCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: RMSWTFTGSQDIDLNVPKGGTSA*QGFHQA
Trigger: GGCCTGATGGAATCCCTGTCATGCGCTGGTCCCACC...TTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGACATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551639.1
CDS-3UTR TCA 90 bp AGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCCCGAGCAAGTCATTAGGTaGGAAGTAGGGTTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SGRARSEGEESRVEMGNPEQVIR*EVGLLL
Trigger: CAGGAGCAACCCTACTTCTCACCTAATGACTTGCTC...GGGATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp GCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGGGCAGTATGTGGCGGTaGTTTACTCAGGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: AAENILLETVAGLVLKVRGSMWR*FTQVEP
Trigger: GGGCTCCACCTGAGTAAATCACCGCCACATACTGCC...CCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTGAGAAGTTCCAACGGATGTCATaGACCTTTACAGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VAVIYSGGAHAGRECGEKFQRMS*TFTGSQ
Trigger: CTGGGACCCTGTAAAGGTCCATGACATCCGTTGGAA...CTTCTCACCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGGCTCCCACAGGAGAATaGCTGGTAGGGGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: DAAENILLETVAGLVLKVAPTGE*LVGGGV
Trigger: GACACCTCCCCCTACCAGCCATTCTCCTGTGGGAGC...CACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp AGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCCCGCCAGAGATAGGTTTTaGGTCCCACAAGCATGGAGA +
Preference number: 4 (lower is better)
Translates to: SGRARSEGEESRVEMGNPARDRF*VPQAWR
Trigger: TCTCCATGCTTGTGGGACCCAAAACCTATCTCTGGC...GGGATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp CTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGCTGACCGTAGCCCGGTaGGACCAGCGCATGACAGGG +
Preference number: 4 (lower is better)
Translates to: LPNINLVCGEWEFWQYVALTVAR*DQRMTG
Trigger: CCCTGTCATGCGCTGGTCCCACCGGGCTACGGTCAG...CGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp ACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCGGGAGGTGTCATGGATaGAAACTGAGCCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: TVAGLVLKVRNPGLRWEIGRCHG*KLSQNS
Trigger: ACTGTTTTGGCTCAGTTTTCATCCATGACACCTCCC...GATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GCAGTATGTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTCATCTTCTCCTGCTTaGGACTTGTTTGCACAAAGC +
Preference number: 4 (lower is better)
Translates to: AVCGGDLLRWSPCRKRVWSSSPA*DLFAQS
Trigger: GCTTTGTGCAAACAAGTCCCAAGCAGGAGAAGATGA...CCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCACATACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp TTGAAGCAATGTTCTTGCTCCCACAGGAGAATGGCTGGTAGGGGGAGGTGTCATTTCCAACGGATGTCATaGACCTTTACAGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LKQCSCSHRRMAGRGRCHFQRMS*TFTGSQ
Trigger: CTGGGACCCTGTAAAGGTCCATGACATCCGTTGGAA...ATGACACCTCCCCCTACCAGCCATTCTCCTGTGGGAGCAAGAACATTGCTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTGAGAAGACTGAACCATTGTCGTaGAAGGATGATTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VAVIYSGGAHAGRECGEKTEPLS*KDDFPL
Trigger: CAGAGGGAAATCATCCTTCCACGACAATGGTTCAGT...CTTCTCACCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCACCCACATACTCTTGAGAGGCGCTCCCACAGGAGAATaGCTGGTAGGGGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GDFRFPFVSVFTHILLRGAPTGE*LVGGGV
Trigger: GACACCTCCCCCTACCAGCCATTCTCCTGTGGGAGC...GCCTCTCAAGAGTATGTGGGTGAAGACTGAAACAAATGGAAACCTAAAATCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp ATGGAGATGCCCTCTCTTCTTTTGAAGCAATGTTCTTGCTCCCACAGGAGAATGAGTAGGTGGCCACGTTaGCGAAGAGGATGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: MEMPSLLLKQCSCSHRRMSRWPR*RRGCAC
Trigger: GCAAGCACATCCTCTTCGTCAACGTGGCCACCTACT...CATTCTCCTGTGGGAGCAAGAACATTGCTTCAAAAGAAGAGAGGGCATCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp ATTCTGGCAGTATGTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAAAAATCTCAGAGGGATaGGGACAGGAGTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: ILAVCGGDLLRWSPCRKRKISEG*GQECFK
Trigger: CTTGAAGCACTCCTGTCCTCATCCCTCTGAGATTTT...TCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCACATACTGCCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp TCAACCTGTAACAGAGGTCTGGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCAGGTGGGACCAGCGCATaGCAGGGATTCCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: STCNRGLGILGFHLFQSSGGTSA*QGFHQA
Trigger: GGCCTGATGGAATCCCTGTCATGCGCTGGTCCCACC...TGAAGACTGAAACAAATGGAAACCTAAAATCCCCAGACCTCTGTTACAGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp GGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCACCCACATACTCTTGAGAGGCGATGTCTGTCTTGACTaGGCTGACCGTAGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: GDFRFPFVSVFTHILLRGDVCLD*ADRSPV
Trigger: CACCGGGCTACGGTCAGCTCAGTCAAGACAGACATC...GCCTCTCAAGAGTATGTGGGTGAAGACTGAAACAAATGGAAACCTAAAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp CCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGGTGGATGTCTGTCTTGACTaGGCTGACCGTAGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: PNINLVCGEWEFWQYVAVDVCLD*ADRSPV
Trigger: CACCGGGCTACGGTCAGCTCAGTCAAGACAGACATC...CACCGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp GTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCCCATCCCTCTGGTGGATATaGATGATTCAACCTGTAACA +
Preference number: 4 (lower is better)
Translates to: VAGLVLKVRNPGLRWEIPSLWWI*MIQPVT
Trigger: TGTTACAGGTTGAATCATTCATATCCACCAGAGGGA...TGGGATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp TTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGGTCTTTGCCCACCTCTaGAGTCTTTTGGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: FIGDSGRARSEGEESRVEVFAHL*SLLVSW
Trigger: CCAAGATACCAAAAGACTGCAGAGGTGGGCAAAGAC...CTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412168.7
CDS-3UTR CCA 90 bp ATTCTGGCAGTATGTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAAGTCTTTTGGTATCTTaGCAGGGACTTAGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: ILAVCGGDLLRWSPCRKRSLLVS*QGLSPS
Trigger: GCTTGGGCTAAGTCCCTGCCAAGATACCAAAAGACT...TCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCACATACTGCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412168.7
CDS-3UTR CCA 90 bp GCAGTATGTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGCCTCATAGTCATAGATaGTGCCTTTCTCGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: AVCGGDLLRWSPCRKRVWPHSHR*CLSRLC
Trigger: ACAAAGACGAGAAAGGCACCATCTATGACTATGAGG...CCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCACATACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp CATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGGAGAGTGGGAATTCTaGCAGTATGTGGCGGTGATT +
Preference number: 4 (lower is better)
Translates to: HFIGDSGRARSEGEESRVGEWEF*QYVAVI
Trigger: AATCACCGCCACATACTGCCAGAATTCCCACTCTCC...AACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp CAGAGGTCTGGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCACCCACATACTCAGTAGGTGGCCACGTTaGCGAAGAGGATGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QRSGDFRFPFVSVFTHILSRWPR*RRGCAC
Trigger: GCAAGCACATCCTCTTCGTCAACGTGGCCACCTACT...GAGTATGTGGGTGAAGACTGAAACAAATGGAAACCTAAAATCCCCAGACCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp GCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAAAATCTCAGAGGGATaGGGACAGGAGTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: AAENILLETVAGLVLKVRKISEG*GQECFK
Trigger: CTTGAAGCACTCCTGTCCTCATCCCTCTGAGATTTT...CCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp GCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGGGGAGGTGTCATGGATaGAAACTGAGCCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: AAENILLETVAGLVLKVRGRCHG*KLSQNS
Trigger: ACTGTTTTGGCTCAGTTTTCATCCATGACACCTCCC...CCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp GTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTGAGAAGTGCTTGCCCACATACTaGTTGAAGGAAACATATTCA +
Preference number: 4 (lower is better)
Translates to: VAVIYSGGAHAGRECGEKCLPTY*LKETYS
Trigger: TGAATATGTTTCCTTCAAGCAGTATGTGGGCAAGCA...CTTCTCACCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp CGATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGGTGATTTACTCAGGTaGAGCCCATGCAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RCCRKHFIGDSGRARSEGGDLLR*SPCRKR
Trigger: TCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACC...ACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp AGCATGGAGATGCCCTCTCTTCTTTTGAAGCAATGTTCTTGCTCCCACAGGAGAGGAGAGTGGGAATTCTaGCAGTATGTGGCGGTGATT +
Preference number: 4 (lower is better)
Translates to: SMEMPSLLLKQCSCSHRRGEWEF*QYVAVI
Trigger: AATCACCGCCACATACTGCCAGAATTCCCACTCTCC...TCTCCTGTGGGAGCAAGAACATTGCTTCAAAAGAAGAGAGGGCATCTCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp TTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGACTGAACCATTGTCGTaGAAGGATGATTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: FIGDSGRARSEGEESRVETEPLS*KDDFPL
Trigger: CAGAGGGAAATCATCCTTCCACGACAATGGTTCAGT...CTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp TGTTCTTCAGGATGTGATGGCCGACTGAACCATTGTCGTGGAAGGATGATTTCCTGGGTCCCACAAGCATaGAGATGCCCTCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: CSSGCDGRLNHCRGRMISWVPQA*RCPLFF
Trigger: AAAGAAGAGAGGGCATCTCCATGCTTGTGGGACCCA...GGAAATCATCCTTCCACGACAATGGTTCAGTCGGCCATCACATCCTGAAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGTGGGTCCCACAAGCATaGAGATGCCCTCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: DAAENILLETVAGLVLKVWVPQA*RCPLFF
Trigger: AAAGAAGAGAGGGCATCTCCATGCTTGTGGGACCCA...CACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp ACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCAATCCAGGGTTGAGATaGGAAATCCCATCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: TVAGLVLKVRNPGLRWEINPGLR*EIPSFK
Trigger: TTTGAAGGATGGGATTTCCCATCTCAACCCTGGATT...GATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp TCATGGACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAATCTCAAGTAGGTGGCCACGTTaGCGAAGAGGATGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SWTFTGSQDIDLNVPKISSRWPR*RRGCAC
Trigger: GCAAGCACATCCTCTTCGTCAACGTGGCCACCTACT...TGAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR TCA 90 bp CTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGAGTAGGTGGCCACGTTaGCGAAGAGGATGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LPNINLVCGEWEFWQYVASRWPR*RRGCAC
Trigger: GCAAGCACATCCTCTTCGTCAACGTGGCCACCTACT...CGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp TTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGTCCCTCTGGTGGATATaGATGATTCAACCTGTAACA +
Preference number: 4 (lower is better)
Translates to: FIGDSGRARSEGEESRVESLWWI*MIQPVT
Trigger: TGTTACAGGTTGAATCATTCATATCCACCAGAGGGA...CTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp TTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATCTTCATCTTCTCCTaGTTGGGACTTGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: FIGDSGRARSEGEESRVEIFIFS*LGLVCT
Trigger: TGTGCAAACAAGTCCCAAGCAGGAGAAGATGAAGAT...CTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp AGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCCCTATTTGGTTTTGAATTaGTTCAAGTACGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SGRARSEGEESRVEMGNPYLVLN*FKYARM
Trigger: CATCCTGGCGTACTTGAAGCAATTCAAAACCAAATA...GGGATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp ATGGAGATGCCCTCTCTTCTTTTGAAGCAATGTTCTTGCTCCCACAGGAGAATGTTCCAACGGATGTCATaGACCTTTACAGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: MEMPSLLLKQCSCSHRRMFQRMS*TFTGSQ
Trigger: CTGGGACCCTGTAAAGGTCCATGACATCCGTTGGAA...CATTCTCCTGTGGGAGCAAGAACATTGCTTCAAAAGAAGAGAGGGCATCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp ACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGTGGGTCCCACAAGCATaGAGATGCCCTCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TSRVERDGRVRMSRNVLQWVPQA*RCPLFF
Trigger: AAAGAAGAGAGGGCATCTCCATGCTTGTGGGACCCA...CTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp CGGATGTCATGGACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAGCCAGAGATAGGTTTTaGGTCCCACAAGCATGGAGA +
Preference number: 4 (lower is better)
Translates to: RMSWTFTGSQDIDLNVPKARDRF*VPQAWR
Trigger: TCTCCATGCTTGTGGGACCCAAAACCTATCTCTGGC...TTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGACATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551639.1
CDS-3UTR TCA 90 bp GACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAATCTCAGAGGGAAAATCTCAGAGGGATaGGGACAGGAGTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: DLYRVPGYRFECAQNLRGKISEG*GQECFK
Trigger: CTTGAAGCACTCCTGTCCTCATCCCTCTGAGATTTT...CCCTCTGAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR TCA 90 bp CCGACTGAACCATTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATAAAATCTCAGAGGGATaGGGACAGGAGTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PTEPLSWKDDFPLVDMNDKISEG*GQECFK
Trigger: CTTGAAGCACTCCTGTCCTCATCCCTCTGAGATTTT...ATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAATGGTTCAGTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp TTCTACACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTGAGCAAGTCATTAGGTaGGAAGTAGGGTTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: FYTSRVERDGRVRMSRNVEQVIR*EVGLLL
Trigger: CAGGAGCAACCCTACTTCTCACCTAATGACTTGCTC...AACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGTGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp AGCATGGAGATGCCCTCTCTTCTTTTGAAGCAATGTTCTTGCTCCCACAGGAGAATTGTCGTGGAAGGATaGTTTCCCTCTGGTGGATAT +
Preference number: 4 (lower is better)
Translates to: SMEMPSLLLKQCSCSHRRIVVEG*FPSGGY
Trigger: ATATCCACCAGAGGGAAATCATCCTTCCACGACAAT...TCTCCTGTGGGAGCAAGAACATTGCTTCAAAAGAAGAGAGGGCATCTCCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp GATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGATTGTCGTGGAAGGATaGTTTCCCTCTGGTGGATAT +
Preference number: 4 (lower is better)
Translates to: DAAENILLETVAGLVLKVIVVEG*FPSGGY
Trigger: ATATCCACCAGAGGGAAATCATCCTTCCACGACAAT...CACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp CTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGGATGTGATGGCCGACTaGACCATTGTCGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LPNINLVCGEWEFWQYVADVMAD*TIVVEG
Trigger: TCCTTCCACGACAATGGTTCAGTCGGCCATCACATC...CGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp TGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAAATGTTCTTCAGGATGTaGTGGCCGACTGAACCATTG +
Preference number: 4 (lower is better)
Translates to: CRKHFIGDSGRARSEGEEMFFRM*WPTEPL
Trigger: CAATGGTTCAGTCGGCCATCACATCCTGAAGAACAT...TTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp ATTCTGGCAGTATGTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGATGCTTGCCCACATACTaGTTGAAGGAAACATATTCA +
Preference number: 4 (lower is better)
Translates to: ILAVCGGDLLRWSPCRKRCLPTY*LKETYS
Trigger: TGAATATGTTTCCTTCAAGCAGTATGTGGGCAAGCA...TCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCACATACTGCCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp ACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGGCATTCCTCTCCAGGTaGCATAACCTGAATGCACTA +
Preference number: 4 (lower is better)
Translates to: TSRVERDGRVRMSRNVLQAFLSR*HNLNAL
Trigger: TAGTGCATTCAGGTTATGGCACCTGGAGAGGAATGC...CTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp GAATGTGCCCAAAATCTCAGAGGGATGAGGACAGGAGTGCTTCAAGAAACTGAAGCATTCCTCTCCAGGTaGCATAACCTGAATGCACTA +
Preference number: 4 (lower is better)
Translates to: ECAQNLRGMRTGVLQETEAFLSR*HNLNAL
Trigger: TAGTGCATTCAGGTTATGGCACCTGGAGAGGAATGC...TTCAGTTTCTTGAAGCACTCCTGTCCTCATCCCTCTGAGATTTTGGGCACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551639.1
CDS-3UTR CCA 90 bp CAGTATGTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTTATAAATCTAGTTTGTaGAGAGTGGGAATTCTGGCA +
Preference number: 4 (lower is better)
Translates to: QYVAVIYSGGAHAGRECGYKSSL*RVGILA
Trigger: TGCCAGAATTCCCACTCTCCACAAACTAGATTTATA...ACCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCACATACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp CCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGGTGGCCAGAGATAGGTTTTaGGTCCCACAAGCATGGAGA +
Preference number: 4 (lower is better)
Translates to: PNINLVCGEWEFWQYVAVARDRF*VPQAWR
Trigger: TCTCCATGCTTGTGGGACCCAAAACCTATCTCTGGC...CACCGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAATCTCAGAGGGTACAAATCCTCCCCCTaGACGGACATACCAGGATAT +
Preference number: 4 (lower is better)
Translates to: DLYRVPGYRFECAQNLRGYKSSP*TDIPGY
Trigger: ATATCCTGGTATGTCCGTCCAGGGGGAGGATTTGTA...CCCTCTGAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR TCA 90 bp CTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGCTGGACGGACATACTTaGGCCCAGGAAGAATCTCTT +
Preference number: 4 (lower is better)
Translates to: LPNINLVCGEWEFWQYVALDGHT*AQEESL
Trigger: AAGAGATTCTTCCTGGGCTCAAGTATGTCCGTCCAG...CGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412168.7
ENST00000550775.5
CDS-3UTR TCA 90 bp TTCTACACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTGGGAGGTGTCATGGATaGAAACTGAGCCAAAACAGT +
Preference number: 4 (lower is better)
Translates to: FYTSRVERDGRVRMSRNVGRCHG*KLSQNS
Trigger: ACTGTTTTGGCTCAGTTTTCATCCATGACACCTCCC...AACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGTGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp ACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGTTGAAGCAATGTTCTTaGTCCCACAGGAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: TSRVERDGRVRMSRNVLQLKQCS*SHRRMA
Trigger: AGCCATTCTCCTGTGGGAGCAAGAACATTGCTTCAA...CTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp CCATTGCTATTTCTACACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCTTGAAGCAATGTTCTTaGTCCCACAGGAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: PLLFLHLQGRERWKSQNVLKQCS*SHRRMA
Trigger: AGCCATTCTCCTGTGGGAGCAAGAACATTGCTTCAA...GACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGTGTAGAAATAGCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GTCATGGACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAATCTCAGAAGGGGAAGCAGATaGACGACCCTTAACTGTGTA +
Preference number: 4 (lower is better)
Translates to: VMDLYRVPGYRFECAQNLRRGSR*TTLNCV
Trigger: TACACAGTTAAGGGTCGTCCATCTGCTTCCCCTTCT...GAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR CCA 90 bp GTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGGATGTGATGGGTGATTTACTCAGGTaGAGCCCATGCAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VERDGRVRMSRNVLQDVMGDLLR*SPCRKR
Trigger: TCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACC...CATCACATCCTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGGATGTGATGGGAGAGTGGGAATTCTaGCAGTATGTGGCGGTGATT +
Preference number: 4 (lower is better)
Translates to: VERDGRVRMSRNVLQDVMGEWEF*QYVAVI
Trigger: AATCACCGCCACATACTGCCAGAATTCCCACTCTCC...CATCACATCCTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp ACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGCTAGTTTGTGGAGAGTaGGAATTCTGGCAGTATGTG +
Preference number: 4 (lower is better)
Translates to: TSRVERDGRVRMSRNVLQLVCGE*EFWQYV
Trigger: CACATACTGCCAGAATTCCCACTCTCCACAAACTAG...CTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp CTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAATCTCAGAGGGATGTACAAATCCTCCCCCTaGACGGACATACCAGGATAT +
Preference number: 4 (lower is better)
Translates to: LYRVPGYRFECAQNLRGMYKSSP*TDIPGY
Trigger: ATATCCTGGTATGTCCGTCCAGGGGGAGGATTTGTA...CATCCCTCTGAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR TCA 90 bp GATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGTGCCCACATACTGCTTaGAGGAAACATATTCATTCT +
Preference number: 4 (lower is better)
Translates to: DAAENILLETVAGLVLKVCPHTA*RKHIHS
Trigger: AGAATGAATATGTTTCCTTCAAGCAGTATGTGGGCA...CACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp TATGAAGTGGAACCTAAATTGTGTGACTGTGACCCCATTGCTATTTCTACACCTCTGGACGGACATACTTaGGCCCAGGAAGAATCTCTT +
Preference number: 4 (lower is better)
Translates to: YEVEPKLCDCDPIAISTPLDGHT*AQEESL
Trigger: AAGAGATTCTTCCTGGGCTCAAGTATGTCCGTCCAG...AGGTGTAGAAATAGCAATGGGGTCACAGTCACACAATTTAGGTTCCACTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412168.7
ENST00000550775.5
CDS-3UTR TCA 90 bp CTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAATCTCAGAGGGATGATTGTCGTGGAAGGATaGTTTCCCTCTGGTGGATAT +
Preference number: 4 (lower is better)
Translates to: LYRVPGYRFECAQNLRGMIVVEG*FPSGGY
Trigger: ATATCCACCAGAGGGAAATCATCCTTCCACGACAAT...CATCCCTCTGAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551639.1
CDS-3UTR TCA 90 bp TGGAAGGATGATTTCCCTCTGGTGGATATGAATGATTCAACCTGTAACAGAGGTATGTTCTTCAGGATGTaGTGGCCGACTGAACCATTG +
Preference number: 4 (lower is better)
Translates to: WKDDFPLVDMNDSTCNRGMFFRM*WPTEPL
Trigger: CAATGGTTCAGTCGGCCATCACATCCTGAAGAACAT...ACCTCTGTTACAGGTTGAATCATTCATATCCACCAGAGGGAAATCATCCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp TGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAAATCTTCATCTTCTCCTaGTTGGGACTTGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: CRKHFIGDSGRARSEGEEIFIFS*LGLVCT
Trigger: TGTGCAAACAAGTCCCAAGCAGGAGAAGATGAAGAT...TTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp GATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGTGCTTGCCCACATACTaGTTGAAGGAAACATATTCA +
Preference number: 4 (lower is better)
Translates to: DAAENILLETVAGLVLKVCLPTY*LKETYS
Trigger: TGAATATGTTTCCTTCAAGCAGTATGTGGGCAAGCA...CACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp GTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGGATGTGATGGCATTCCTCTCCAGGTaGCATAACCTGAATGCACTA +
Preference number: 4 (lower is better)
Translates to: VERDGRVRMSRNVLQDVMAFLSR*HNLNAL
Trigger: TAGTGCATTCAGGTTATGGCACCTGGAGAGGAATGC...CATCACATCCTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGGATGTGATGAGAAGGGGAAGCAGATaGACGACCCTTAACTGTGTA +
Preference number: 4 (lower is better)
Translates to: VERDGRVRMSRNVLQDVMRRGSR*TTLNCV
Trigger: TACACAGTTAAGGGTCGTCCATCTGCTTCCCCTTCT...CATCACATCCTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp CCTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCAGAAGGGGAAGCAGATaGACGACCCTTAACTGTGTA +
Preference number: 4 (lower is better)
Translates to: PSKYKSSLWRVGILAVCGRRGSR*TTLNCV
Trigger: TACACAGTTAAGGGTCGTCCATCTGCTTCCCCTTCT...GCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GGATATAGATTTGAATGTGCCCAAAATCTCAGAGGGATGAGGACAGGAGTGCTTTCATCTTCTCCTGCTTaGGACTTGTTTGCACAAAGC +
Preference number: 4 (lower is better)
Translates to: GYRFECAQNLRGMRTGVLSSSPA*DLFAQS
Trigger: GCTTTGTGCAAACAAGTCCCAAGCAGGAGAAGATGA...AAGCACTCCTGTCCTCATCCCTCTGAGATTTTGGGCACATTCAAATCTATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR CCA 90 bp CCAGGATATAGATTTGAATGTGCCCAAAATCTCAGAGGGATGAGGACAGGAGTGCCTCATAGTCATAGATaGTGCCTTTCTCGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: PGYRFECAQNLRGMRTGVPHSHR*CLSRLC
Trigger: ACAAAGACGAGAAAGGCACCATCTATGACTATGAGG...CACTCCTGTCCTCATCCCTCTGAGATTTTGGGCACATTCAAATCTATATCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR CCA 90 bp TTTCCATTTGTTTCAGTCTTCACCCACATACTCTTGAGAGGCAAAAGAGCAGTAGGTGATTTACTCAGGTaGAGCCCATGCAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: FPFVSVFTHILLRGKRAVGDLLR*SPCRKR
Trigger: TCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACC...TACTGCTCTTTTGCCTCTCAAGAGTATGTGGGTGAAGACTGAAACAAATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCACCCACATACTCTTGAGAGGCCTAGTTTGTGGAGAGTaGGAATTCTGGCAGTATGTG +
Preference number: 4 (lower is better)
Translates to: GDFRFPFVSVFTHILLRGLVCGE*EFWQYV
Trigger: CACATACTGCCAGAATTCCCACTCTCCACAAACTAG...GCCTCTCAAGAGTATGTGGGTGAAGACTGAAACAAATGGAAACCTAAAATCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp CCATTGCTATTTCTACACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCAATCCAGGGTTGAGATaGGAAATCCCATCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: PLLFLHLQGRERWKSQNVNPGLR*EIPSFK
Trigger: TTTGAAGGATGGGATTTCCCATCTCAACCCTGGATT...GACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGTGTAGAAATAGCAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp CCGACTGAACCATTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATTGCCCACATACTGCTTaGAGGAAACATATTCATTCT +
Preference number: 4 (lower is better)
Translates to: PTEPLSWKDDFPLVDMNDCPHTA*RKHIHS
Trigger: AGAATGAATATGTTTCCTTCAAGCAGTATGTGGGCA...ATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAATGGTTCAGTCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp CAGAGGTCTGGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCACCCACATACTCTCCCTCTGGTGGATATaGATGATTCAACCTGTAACA +
Preference number: 4 (lower is better)
Translates to: QRSGDFRFPFVSVFTHILSLWWI*MIQPVT
Trigger: TGTTACAGGTTGAATCATTCATATCCACCAGAGGGA...GAGTATGTGGGTGAAGACTGAAACAAATGGAAACCTAAAATCCCCAGACCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp AGATTTGAATGTGCCCAAAATCTCAGAGGGATGAGGACAGGAGTGCTTCAAGAAATCTTCATCTTCTCCTaGTTGGGACTTGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: RFECAQNLRGMRTGVLQEIFIFS*LGLVCT
Trigger: TGTGCAAACAAGTCCCAAGCAGGAGAAGATGAAGAT...TTCTTGAAGCACTCCTGTCCTCATCCCTCTGAGATTTTGGGCACATTCAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR GCA 90 bp GTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGGATGTGATGTTGAAGCAATGTTCTTaGTCCCACAGGAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: VERDGRVRMSRNVLQDVMLKQCS*SHRRMA
Trigger: AGCCATTCTCCTGTGGGAGCAAGAACATTGCTTCAA...CATCACATCCTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp CCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGGTGCCTCATAGTCATAGATaGTGCCTTTCTCGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: PNINLVCGEWEFWQYVAVPHSHR*CLSRLC
Trigger: ACAAAGACGAGAAAGGCACCATCTATGACTATGAGG...CACCGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp GAACCATTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATTCAACCCCTCATAGTCATAGATaGTGCCTTTCTCGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: EPLSWKDDFPLVDMNDSTPHSHR*CLSRLC
Trigger: ACAAAGACGAGAAAGGCACCATCTATGACTATGAGG...GGTTGAATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAATGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp CCATTGCTATTTCTACACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCCTGAGCCAAAACAGTTaGAAACTGATGATACACGTT +
Preference number: 4 (lower is better)
Translates to: PLLFLHLQGRERWKSQNVLSQNS*KLMIHV
Trigger: AACGTGTATCATCAGTTTCCAACTGTTTTGGCTCAG...GACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGTGTAGAAATAGCAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp TGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAACTGAGCCAAAACAGTTaGAAACTGATGATACACGTT +
Preference number: 4 (lower is better)
Translates to: CRKHFIGDSGRARSEGEELSQNS*KLMIHV
Trigger: AACGTGTATCATCAGTTTCCAACTGTTTTGGCTCAG...TTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp CAGAGGTCTGGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCACCCACATACTCAATCCAGGGTTGAGATaGGAAATCCCATCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: QRSGDFRFPFVSVFTHILNPGLR*EIPSFK
Trigger: TTTGAAGGATGGGATTTCCCATCTCAACCCTGGATT...GAGTATGTGGGTGAAGACTGAAACAAATGGAAACCTAAAATCCCCAGACCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp AGATTTGAATGTGCCCAAAATCTCAGAGGGATGAGGACAGGAGTGCTTCAAGAATGCCCACATACTGCTTaGAGGAAACATATTCATTCT +
Preference number: 4 (lower is better)
Translates to: RFECAQNLRGMRTGVLQECPHTA*RKHIHS
Trigger: AGAATGAATATGTTTCCTTCAAGCAGTATGTGGGCA...TTCTTGAAGCACTCCTGTCCTCATCCCTCTGAGATTTTGGGCACATTCAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR TCA 90 bp ACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAATCTCAGAGGGATGCCCACATACTGCTTaGAGGAAACATATTCATTCT +
Preference number: 4 (lower is better)
Translates to: TFTGSQDIDLNVPKISEGCPHTA*RKHIHS
Trigger: AGAATGAATATGTTTCCTTCAAGCAGTATGTGGGCA...TCCCTCTGAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR TCA 90 bp GAACCATTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATTCAACCCTTCCTATTTGGTTTTaGATTGCTTCAAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: EPLSWKDDFPLVDMNDSTLPIWF*IASSTP
Trigger: TGGCGTACTTGAAGCAATTCAAAACCAAATAGGAAG...GGTTGAATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAATGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp CCTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCATCTTCATCTTCTCCTaGTTGGGACTTGTTTGCACA +
Preference number: 4 (lower is better)
Translates to: PSKYKSSLWRVGILAVCGIFIFS*LGLVCT
Trigger: TGTGCAAACAAGTCCCAAGCAGGAGAAGATGAAGAT...GCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp GATGATTTCCCTCTGGTGGATATGAATGATTCAACCTGTAACAGAGGTCTGGGGTATTTGGTTTTGAATTaGTTCAAGTACGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: DDFPLVDMNDSTCNRGLGYLVLN*FKYARM
Trigger: CATCCTGGCGTACTTGAAGCAATTCAAAACCAAATA...CCCCAGACCTCTGTTACAGGTTGAATCATTCATATCCACCAGAGGGAAATCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp TCAACCTGTAACAGAGGTCTGGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCACTAGTTTGTGGAGAGTaGGAATTCTGGCAGTATGTG +
Preference number: 4 (lower is better)
Translates to: STCNRGLGILGFHLFQSSLVCGE*EFWQYV
Trigger: CACATACTGCCAGAATTCCCACTCTCCACAAACTAG...TGAAGACTGAAACAAATGGAAACCTAAAATCCCCAGACCTCTGTTACAGGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp CTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGCTTCCTATTTGGTTTTaGATTGCTTCAAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: LPNINLVCGEWEFWQYVALPIWF*IASSTP
Trigger: TGGCGTACTTGAAGCAATTCAAAACCAAATAGGAAG...CGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp ATGTCATGGACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAATCCTTCCTATTTGGTTTTaGATTGCTTCAAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: MSWTFTGSQDIDLNVPKILPIWF*IASSTP
Trigger: TGGCGTACTTGAAGCAATTCAAAACCAAATAGGAAG...GATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551639.1
CDS-3UTR TCA 90 bp AAAAATGTTATGAAGTGGAACCTAAATTGTGTGACTGTGACCCCATTGCTATTTGAGCAAGTCATTAGGTaGGAAGTAGGGTTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KNVMKWNLNCVTVTPLLFEQVIR*EVGLLL
Trigger: CAGGAGCAACCCTACTTCTCACCTAATGACTTGCTC...AAATAGCAATGGGGTCACAGTCACACAATTTAGGTTCCACTTCATAACATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp GATGTCATGGACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAATTGCTTGCCCACATACTaGTTGAAGGAAACATATTCA +
Preference number: 4 (lower is better)
Translates to: DVMDLYRVPGYRFECAQNCLPTY*LKETYS
Trigger: TGAATATGTTTCCTTCAAGCAGTATGTGGGCAAGCA...ATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR CCA 90 bp GAACCATTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATTCAACCTATAAATCTAGTTTGTaGAGAGTGGGAATTCTGGCA +
Preference number: 4 (lower is better)
Translates to: EPLSWKDDFPLVDMNDSTYKSSL*RVGILA
Trigger: TGCCAGAATTCCCACTCTCCACAAACTAGATTTATA...GGTTGAATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAATGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp CCTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCCTGAGCCAAAACAGTTaGAAACTGATGATACACGTT +
Preference number: 4 (lower is better)
Translates to: PSKYKSSLWRVGILAVCGLSQNS*KLMIHV
Trigger: AACGTGTATCATCAGTTTCCAACTGTTTTGGCTCAG...GCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR TCA 90 bp AAAAATGTTATGAAGTGGAACCTAAATTGTGTGACTGTGACCCCATTGCTATTTATGTTCTTCAGGATGTaGTGGCCGACTGAACCATTG +
Preference number: 4 (lower is better)
Translates to: KNVMKWNLNCVTVTPLLFMFFRM*WPTEPL
Trigger: CAATGGTTCAGTCGGCCATCACATCCTGAAGAACAT...AAATAGCAATGGGGTCACAGTCACACAATTTAGGTTCCACTTCATAACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp AAAAATGTTATGAAGTGGAACCTAAATTGTGTGACTGTGACCCCATTGCTATTTAGAAGGGGAAGCAGATaGACGACCCTTAACTGTGTA +
Preference number: 4 (lower is better)
Translates to: KNVMKWNLNCVTVTPLLFRRGSR*TTLNCV
Trigger: TACACAGTTAAGGGTCGTCCATCTGCTTCCCCTTCT...AAATAGCAATGGGGTCACAGTCACACAATTTAGGTTCCACTTCATAACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR GCA 90 bp TCAACCTGTAACAGAGGTCTGGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCATATTTGGTTTTGAATTaGTTCAAGTACGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: STCNRGLGILGFHLFQSSYLVLN*FKYARM
Trigger: CATCCTGGCGTACTTGAAGCAATTCAAAACCAAATA...TGAAGACTGAAACAAATGGAAACCTAAAATCCCCAGACCTCTGTTACAGGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp AAAAATGTTATGAAGTGGAACCTAAATTGTGTGACTGTGACCCCATTGCTATTTTCATCTTCTCCTGCTTaGGACTTGTTTGCACAAAGC +
Preference number: 4 (lower is better)
Translates to: KNVMKWNLNCVTVTPLLFSSSPA*DLFAQS
Trigger: GCTTTGTGCAAACAAGTCCCAAGCAGGAGAAGATGA...AAATAGCAATGGGGTCACAGTCACACAATTTAGGTTCCACTTCATAACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CCA 90 bp AAAAATGTTATGAAGTGGAACCTAAATTGTGTGACTGTGACCCCATTGCTATTTTATAAATCTAGTTTGTaGAGAGTGGGAATTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KNVMKWNLNCVTVTPLLFYKSSL*RVGILA
Trigger: TGCCAGAATTCCCACTCTCCACAAACTAGATTTATA...AAATAGCAATGGGGTCACAGTCACACAATTTAGGTTCCACTTCATAACATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp GTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCCCACCTGGACGGACATACTaGAGCCCAGGAAGAATCTCT +
Preference number: 5 (lower is better)
Translates to: VAGLVLKVRNPGLRWEIPPGRTY*SPGRIS
Trigger: AGAGATTCTTCCTGGGCTCAAGTATGTCCGTCCAGG...TGGGATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412168.7
ENST00000550775.5
CDS-3UTR CAA 90 bp GTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTGAGAAGACTAGTGTTTGTAGATaGCTAGTCTGGGGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: VAVIYSGGAHAGRECGEKTSVCR*LVWGPE
Trigger: CTCAGGCCCCCAGACTAGCAATCTACAAACACTAGT...CTTCTCACCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412168.7
CDS-3UTR CAA 90 bp GTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCCCAACGAAGAGGATGTGCTaGCCCACATACTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: VAGLVLKVRNPGLRWEIPTKRMC*PTYCLK
Trigger: CTTCAAGCAGTATGTGGGCAAGCACATCCTCTTCGT...TGGGATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp GTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTGAGAAGGGACATACCAGGATATaGCGCTGTCAGACCACAGTA +
Preference number: 5 (lower is better)
Translates to: VAVIYSGGAHAGRECGEKGHTRI*RCQTTV
Trigger: TACTGTGGTCTGACAGCGCAATATCCTGGTATGTCC...CTTCTCACCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551639.1
CDS-3UTR CAA 90 bp GTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGATGGGAAATCCCATTTGAAGCAATGTTCTaGCTCCCACAGGAGAATGGC +
Preference number: 5 (lower is better)
Translates to: VAGLVLKVRNPGLRWEIPFEAMF*LPQENG
Trigger: GCCATTCTCCTGTGGGAGCAAGAACATTGCTTCAAA...TGGGATTTCCCATCTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp TTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGAGGAATCCAGGGTTGAGTCTCCTGCTTGGGACTaGTTTGCACAAAGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: FIGDSGRARSEGEESRVESPAWD*FAQSRL
Trigger: TAGCCTGCTTTGTGCAAACAAGTCCCAAGCAGGAGA...CTCAACCCTGGATTCCTCACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp GCAGTATGTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTTCACCCACATACTCTaGAGAGGCAAAAGAGCAGTA +
Preference number: 5 (lower is better)
Translates to: AVCGGDLLRWSPCRKRVWFTHIL*RGKRAV
Trigger: TACTGCTCTTTTGCCTCTCAAGAGTATGTGGGTGAA...CCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCACATACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp GCAGTATGTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGCCTTCCTATTTGGTTTaGAATTGCTTCAAGTACGCC +
Preference number: 5 (lower is better)
Translates to: AVCGGDLLRWSPCRKRVWPSYLV*NCFKYA
Trigger: GGCGTACTTGAAGCAATTCAAAACCAAATAGGAAGG...CCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCACATACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp CCATTGCTATTTCTACACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCCCTGGACGGACATACTaGAGCCCAGGAAGAATCTCT +
Preference number: 5 (lower is better)
Translates to: PLLFLHLQGRERWKSQNVPGRTY*SPGRIS
Trigger: AGAGATTCTTCCTGGGCTCAAGTATGTCCGTCCAGG...GACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGTGTAGAAATAGCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412168.7
ENST00000550775.5
CDS-3UTR CAA 90 bp CAGTATGTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTCCTTCCTATTTGGTTTaGAATTGCTTCAAGTACGCC +
Preference number: 5 (lower is better)
Translates to: QYVAVIYSGGAHAGRECGPSYLV*NCFKYA
Trigger: GGCGTACTTGAAGCAATTCAAAACCAAATAGGAAGG...ACCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCACATACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp CAGTATGTGGCGGTGATTTACTCAGGTGGAGCCCATGCAGGAAGAGAGTGTGGTACTGAGCCAAAACAGTaGGAAACTGATGATACACGT +
Preference number: 5 (lower is better)
Translates to: QYVAVIYSGGAHAGRECGTEPKQ*ETDDTR
Trigger: ACGTGTATCATCAGTTTCCAACTGTTTTGGCTCAGT...ACCACACTCTCTTCCTGCATGGGCTCCACCTGAGTAAATCACCGCCACATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS CCA 90 bp ACCCTTAACTGTGTAGTCATGACTAGTGTTTGTAGATTGCTAGTCTaGGGGCCTGAGGTCTTTGCCCACCTCTGCAGTCTTTTGGTATCT +
Preference number: 5 (lower is better)
Translates to: TLNCVVMTSVCRLLV*GPEVFAHLCSLLVS
Trigger: AGATACCAAAAGACTGCAGAGGTGGGCAAAGACCTCAGGCCCCCAGACTAGCAATCTACAAACACTAGTCATGACTACACAGTTAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412168.7
CDS-3UTR CAA 90 bp CCAGGATATAGATTTGAATGTGCCCAAAATCTCAGAGGGATGAGGACAGGAGTGTCTCCTGCTTGGGACTaGTTTGCACAAAGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: PGYRFECAQNLRGMRTGVSPAWD*FAQSRL
Trigger: TAGCCTGCTTTGTGCAAACAAGTCCCAAGCAGGAGA...CACTCCTGTCCTCATCCCTCTGAGATTTTGGGCACATTCAAATCTATATCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR CAA 90 bp GATGATTTCCCTCTGGTGGATATGAATGATTCAACCTGTAACAGAGGTCTGGGGTGGCCGACTGAACCATaGTCGTGGAAGGATGATTTC +
Preference number: 5 (lower is better)
Translates to: DDFPLVDMNDSTCNRGLGWPTEP*SWKDDF
Trigger: GAAATCATCCTTCCACGACAATGGTTCAGTCGGCCA...CCCCAGACCTCTGTTACAGGTTGAATCATTCATATCCACCAGAGGGAAATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp GGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCACCCACATACTCTTGAGAGGCGTGAGGAATCCAGGGTaGAGATGGGAAATCCCATCC +
Preference number: 5 (lower is better)
Translates to: GDFRFPFVSVFTHILLRGVRNPG*RWEIPS
Trigger: GGATGGGATTTCCCATCTCAACCCTGGATTCCTCAC...GCCTCTCAAGAGTATGTGGGTGAAGACTGAAACAAATGGAAACCTAAAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp CGGATGTCATGGACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAGGACATACCAGGATATaGCGCTGTCAGACCACAGTA +
Preference number: 5 (lower is better)
Translates to: RMSWTFTGSQDIDLNVPKGHTRI*RCQTTV
Trigger: TACTGTGGTCTGACAGCGCAATATCCTGGTATGTCC...TTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGACATCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR CAA 90 bp CGGATGTCATGGACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAGTGCCTTTCTCGTCTTaGTGGCAATCCATCTTCATC +
Preference number: 5 (lower is better)
Translates to: RMSWTFTGSQDIDLNVPKVPFSS*WQSIFI
Trigger: GATGAAGATGGATTGCCACAAAGACGAGAAAGGCAC...TTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGACATCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR CAA 90 bp CCGACTGAACCATTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATGTGCCTTTCTCGTCTTaGTGGCAATCCATCTTCATC +
Preference number: 5 (lower is better)
Translates to: PTEPLSWKDDFPLVDMNDVPFSS*WQSIFI
Trigger: GATGAAGATGGATTGCCACAAAGACGAGAAAGGCAC...ATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAATGGTTCAGTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp ACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAATCTCAGAGGGAACGAAGAGGATGTGCTaGCCCACATACTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: TFTGSQDIDLNVPKISEGTKRMC*PTYCLK
Trigger: CTTCAAGCAGTATGTGGGCAAGCACATCCTCTTCGT...TCCCTCTGAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR CAA 90 bp GGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCACCCACATACTCTTGAGAGGCACGAAGAGGATGTGCTaGCCCACATACTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GDFRFPFVSVFTHILLRGTKRMC*PTYCLK
Trigger: CTTCAAGCAGTATGTGGGCAAGCACATCCTCTTCGT...GCCTCTCAAGAGTATGTGGGTGAAGACTGAAACAAATGGAAACCTAAAATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp AATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGGTGATTTACTCAACGAAGAGGATGTGCTaGCCCACATACTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: NLVCGEWEFWQYVAVIYSTKRMC*PTYCLK
Trigger: CTTCAAGCAGTATGTGGGCAAGCACATCCTCTTCGT...TGAGTAAATCACCGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp GTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGGATGTGATGGTGAGGAATCCAGGGTaGAGATGGGAAATCCCATCC +
Preference number: 5 (lower is better)
Translates to: VERDGRVRMSRNVLQDVMVRNPG*RWEIPS
Trigger: GGATGGGATTTCCCATCTCAACCCTGGATTCCTCAC...CATCACATCCTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS CCA 90 bp CTCTTACTCCACTCATCAGCAGGTAGAGTAGAAAGAACACTGCCCTaGGAATCAGAAGCCAGCTCCATTGTTAAATTCCTTTGTGAACCT +
Preference number: 5 (lower is better)
Translates to: LLLHSSAGRVERTLP*ESEASSIVKFLCEP
Trigger: AGGTTCACAAAGGAATTTAACAATGGAGCTGGCTTCTGATTCCCAGGGCAGTGTTCTTTCTACTCTACCTGCTGATGAGTGGAGTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442674.6
ENST00000483784.1
CDS-3UTR CAA 90 bp TTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATTCAACCTGTAACTCTCCTGCTTGGGACTaGTTTGCACAAAGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: LSWKDDFPLVDMNDSTCNSPAWD*FAQSRL
Trigger: TAGCCTGCTTTGTGCAAACAAGTCCCAAGCAGGAGA...GTTACAGGTTGAATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp CCAGGATATAGATTTGAATGTGCCCAAAATCTCAGAGGGATGAGGACAGGAGTGTTCATCTTCTCCTGCTaGGGACTTGTTTGCACAAAG +
Preference number: 5 (lower is better)
Translates to: PGYRFECAQNLRGMRTGVFIFSC*GLVCTK
Trigger: CTTTGTGCAAACAAGTCCCAAGCAGGAGAAGATGAA...CACTCCTGTCCTCATCCCTCTGAGATTTTGGGCACATTCAAATCTATATCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR CAA 90 bp CCATTGCTATTTCTACACCTCCAGGGTAGAGAGAGATGGAAGAGTCAGAATGTCTTCATCTTCTCCTGCTaGGGACTTGTTTGCACAAAG +
Preference number: 5 (lower is better)
Translates to: PLLFLHLQGRERWKSQNVFIFSC*GLVCTK
Trigger: CTTTGTGCAAACAAGTCCCAAGCAGGAGAAGATGAA...GACATTCTGACTCTTCCATCTCTCTCTACCCTGGAGGTGTAGAAATAGCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp AATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGGTGATTTACTCAGTGCCTTTCTCGTCTTaGTGGCAATCCATCTTCATC +
Preference number: 5 (lower is better)
Translates to: NLVCGEWEFWQYVAVIYSVPFSS*WQSIFI
Trigger: GATGAAGATGGATTGCCACAAAGACGAGAAAGGCAC...TGAGTAAATCACCGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp GATGATTTCCCTCTGGTGGATATGAATGATTCAACCTGTAACAGAGGTCTGGGGTTCACCCACATACTCTaGAGAGGCAAAAGAGCAGTA +
Preference number: 5 (lower is better)
Translates to: DDFPLVDMNDSTCNRGLGFTHIL*RGKRAV
Trigger: TACTGCTCTTTTGCCTCTCAAGAGTATGTGGGTGAA...CCCCAGACCTCTGTTACAGGTTGAATCATTCATATCCACCAGAGGGAAATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp CTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGTGGCCGACTGAACCATaGTCGTGGAAGGATGATTTC +
Preference number: 5 (lower is better)
Translates to: LPNINLVCGEWEFWQYVAWPTEP*SWKDDF
Trigger: GAAATCATCCTTCCACGACAATGGTTCAGTCGGCCA...CGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp TCATGGACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAATCTCATGGCCGACTGAACCATaGTCGTGGAAGGATGATTTC +
Preference number: 5 (lower is better)
Translates to: SWTFTGSQDIDLNVPKISWPTEP*SWKDDF
Trigger: GAAATCATCCTTCCACGACAATGGTTCAGTCGGCCA...TGAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551639.1
CDS-3UTR CAA 90 bp CGATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTACTGAGCCAAAACAGTaGGAAACTGATGATACACGT +
Preference number: 5 (lower is better)
Translates to: RCCRKHFIGDSGRARSEGTEPKQ*ETDDTR
Trigger: ACGTGTATCATCAGTTTCCAACTGTTTTGGCTCAGT...ACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp AATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGGTGATTTACTCATTTGAAGCAATGTTCTaGCTCCCACAGGAGAATGGC +
Preference number: 5 (lower is better)
Translates to: NLVCGEWEFWQYVAVIYSFEAMF*LPQENG
Trigger: GCCATTCTCCTGTGGGAGCAAGAACATTGCTTCAAA...TGAGTAAATCACCGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp TCAACCTGTAACAGAGGTCTGGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCAGTGAGGAATCCAGGGTaGAGATGGGAAATCCCATCC +
Preference number: 5 (lower is better)
Translates to: STCNRGLGILGFHLFQSSVRNPG*RWEIPS
Trigger: GGATGGGATTTCCCATCTCAACCCTGGATTCCTCAC...TGAAGACTGAAACAAATGGAAACCTAAAATCCCCAGACCTCTGTTACAGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp TCAACCTGTAACAGAGGTCTGGGGATTTTAGGTTTCCATTTGTTTCAGTCTTCATCTCCTGCTTGGGACTaGTTTGCACAAAGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: STCNRGLGILGFHLFQSSSPAWD*FAQSRL
Trigger: TAGCCTGCTTTGTGCAAACAAGTCCCAAGCAGGAGA...TGAAGACTGAAACAAATGGAAACCTAAAATCCCCAGACCTCTGTTACAGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp GATGCTGCAGAAAACATTTTATTGGAGACAGTGGCAGGGCTCGTTCTGAAGGTGTCCCAGGATATAGATTaGAATGTGCCCAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: DAAENILLETVAGLVLKVSQDID*NVPKIS
Trigger: TGAGATTTTGGGCACATTCAAATCTATATCCTGGGA...CACCTTCAGAACGAGCCCTGCCACTGTCTCCAATAAAATGTTTTCTGCAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp GACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAATCTCAGAGGGCCTTCCTATTTGGTTTaGAATTGCTTCAAGTACGCC +
Preference number: 5 (lower is better)
Translates to: DLYRVPGYRFECAQNLRGPSYLV*NCFKYA
Trigger: GGCGTACTTGAAGCAATTCAAAACCAAATAGGAAGG...CCCTCTGAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551639.1
CDS-3UTR CAA 90 bp AGATTTGAATGTGCCCAAAATCTCAGAGGGATGAGGACAGGAGTGCTTCAAGAAGAAGTGGAACCTAAATaGTGTGACTGTGACCCCATT +
Preference number: 5 (lower is better)
Translates to: RFECAQNLRGMRTGVLQEEVEPK*CDCDPI
Trigger: AATGGGGTCACAGTCACACAATTTAGGTTCCACTTC...TTCTTGAAGCACTCCTGTCCTCATCCCTCTGAGATTTTGGGCACATTCAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551639.1
CDS-3UTR CAA 90 bp CGGATGTCATGGACCTTTACAGGGTCCCAGGATATAGATTTGAATGTGCCCAAAACTGAGCCAAAACAGTaGGAAACTGATGATACACGT +
Preference number: 5 (lower is better)
Translates to: RMSWTFTGSQDIDLNVPKTEPKQ*ETDDTR
Trigger: ACGTGTATCATCAGTTTCCAACTGTTTTGGCTCAGT...TTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGACATCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551639.1
CDS-3UTR CAA 90 bp CTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGTTCATCTTCTCCTGCTaGGGACTTGTTTGCACAAAG +
Preference number: 5 (lower is better)
Translates to: LPNINLVCGEWEFWQYVAFIFSC*GLVCTK
Trigger: CTTTGTGCAAACAAGTCCCAAGCAGGAGAAGATGAA...CGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp CTTCCAAATATAAATCTAGTTTGTGGAGAGTGGGAATTCTGGCAGTATGTGGCGGAAGTGGAACCTAAATaGTGTGACTGTGACCCCATT +
Preference number: 5 (lower is better)
Translates to: LPNINLVCGEWEFWQYVAEVEPK*CDCDPI
Trigger: AATGGGGTCACAGTCACACAATTTAGGTTCCACTTC...CGCCACATACTGCCAGAATTCCCACTCTCCACAAACTAGATTTATATTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp TATGAAGTGGAACCTAAATTGTGTGACTGTGACCCCATTGCTATTTCTACACCTTTTGAAGCAATGTTCTaGCTCCCACAGGAGAATGGC +
Preference number: 5 (lower is better)
Translates to: YEVEPKLCDCDPIAISTPFEAMF*LPQENG
Trigger: GCCATTCTCCTGTGGGAGCAAGAACATTGCTTCAAA...AGGTGTAGAAATAGCAATGGGGTCACAGTCACACAATTTAGGTTCCACTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS GCA 90 bp CTTGCCCACATACTGCTTGAAGGAAACATATTCATTCTTATTAAGTaGGATGGCCTCATAGTCATAGATGGTGCCTTTCTCGTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: LAHILLEGNIFILIK*DGLIVIDGAFLVFV
Trigger: CACAAAGACGAGAAAGGCACCATCTATGACTATGAGGCCATCGCACTTAATAAGAATGAATATGTTTCCTTCAAGCAGTATGTGGGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412168.7
ENST00000442674.6
ENST00000469384.1
ENST00000483784.1
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp TTTCCATTTGTTTCAGTCTTCACCCACATACTCTTGAGAGGCAAAAGAGCAGTATTCATCTTCTCCTGCTaGGGACTTGTTTGCACAAAG +
Preference number: 5 (lower is better)
Translates to: FPFVSVFTHILLRGKRAVFIFSC*GLVCTK
Trigger: CTTTGTGCAAACAAGTCCCAAGCAGGAGAAGATGAA...TACTGCTCTTTTGCCTCTCAAGAGTATGTGGGTGAAGACTGAAACAAATGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp GAACCATTGTCGTGGAAGGATGATTTCCCTCTGGTGGATATGAATGATTCAACCTCCCAGGATATAGATTaGAATGTGCCCAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: EPLSWKDDFPLVDMNDSTSQDID*NVPKIS
Trigger: TGAGATTTTGGGCACATTCAAATCTATATCCTGGGA...GGTTGAATCATTCATATCCACCAGAGGGAAATCATCCTTCCACGACAATGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp TATGAAGTGGAACCTAAATTGTGTGACTGTGACCCCATTGCTATTTCTACACCTGAAGTGGAACCTAAATaGTGTGACTGTGACCCCATT +
Preference number: 5 (lower is better)
Translates to: YEVEPKLCDCDPIAISTPEVEPK*CDCDPI
Trigger: AATGGGGTCACAGTCACACAATTTAGGTTCCACTTC...AGGTGTAGAAATAGCAATGGGGTCACAGTCACACAATTTAGGTTCCACTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp TATAGATTTGAATGTGCCCAAAATCTCAGAGGGATGAGGACAGGAGTGCTTCAATCCCAGGATATAGATTaGAATGTGCCCAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: YRFECAQNLRGMRTGVLQSQDID*NVPKIS
Trigger: TGAGATTTTGGGCACATTCAAATCTATATCCTGGGA...TTGAAGCACTCCTGTCCTCATCCCTCTGAGATTTTGGGCACATTCAAATCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469384.1
ENST00000551639.1
CDS-3UTR CAA 90 bp GTAGAGAGAGATGGAAGAGTCAGAATGTCTAGGAATGTTCTTCAGGATGTGATGTCCCAGGATATAGATTaGAATGTGCCCAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: VERDGRVRMSRNVLQDVMSQDID*NVPKIS
Trigger: TGAGATTTTGGGCACATTCAAATCTATATCCTGGGA...CATCACATCCTGAAGAACATTCCTAGACATTCTGACTCTTCCATCTCTCTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS-3UTR CAA 90 bp AAAAATGTTATGAAGTGGAACCTAAATTGTGTGACTGTGACCCCATTGCTATTTTTCACCCACATACTCTaGAGAGGCAAAAGAGCAGTA +
Preference number: 5 (lower is better)
Translates to: KNVMKWNLNCVTVTPLLFFTHIL*RGKRAV
Trigger: TACTGCTCTTTTGCCTCTCAAGAGTATGTGGGTGAA...AAATAGCAATGGGGTCACAGTCACACAATTTAGGTTCCACTTCATAACATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000412168.7
ENST00000550775.5
ENST00000551639.1
CDS CAA 90 bp TTGCTAGTCTGGGGGCCTGAGGTCTTTGCCCACCTCTGCAGTCTTTaGGTATCTTGGCAGGGACTTAGCCCAAGCCCCCACAGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: LLVWGPEVFAHLCSL*VSWQGLSPSPHRPV
Trigger: GACTGGCCTGTGGGGGCTTGGGCTAAGTCCCTGCCAAGATACCAAAAGACTGCAGAGGTGGGCAAAGACCTCAGGCCCCCAGACTAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412168.7
CDS CCA 72 bp GAGGTCTTTGCCCACCTCTGCAGTCTTTTGGTATCTTaGCAGGGACTTAGCCCAAGCCCCCACAGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: EVFAHLCSLLVS*QGLSPSPHRPV
Trigger: GACTGGCCTGTGGGGGCTTGGGCTAAGTCCCTGCCAAGATACCAAAAGACTGCAGAGGTGGGCAAAGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412168.7
CDS GCA 72 bp TTGCTAGTCTGGGGGCCTGAGGTCTTTGCCCACCTCTaGAGTCTTTTGGTATCTTGGCAGGGACTTAGCCCA +
Preference number: 6 (lower is better)
Translates to: LLVWGPEVFAHL*SLLVSWQGLSP
Trigger: TGGGCTAAGTCCCTGCCAAGATACCAAAAGACTGCAGAGGTGGGCAAAGACCTCAGGCCCCCAGACTAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412168.7
CDS CAA 90 bp AGATGGACGACCCTTAACTGTGTAGTCATGACTAGTGTTTGTAGATaGCTAGTCTGGGGGCCTGAGGTCTTTGCCCACCTCTGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: RWTTLNCVVMTSVCR*LVWGPEVFAHLCSL
Trigger: AAGACTGCAGAGGTGGGCAAAGACCTCAGGCCCCCAGACTAGCAATCTACAAACACTAGTCATGACTACACAGTTAAGGGTCGTCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412168.7
CDS CCA 72 bp CGTCTTTGTGGCAATCCATCTTCATCTTCTCCTGCTTaGGACTTGTTTGCACAAAGCAGGCTAGGAGAAGGG +
Preference number: 6 (lower is better)
Translates to: RLCGNPSSSSPA*DLFAQSRLGEG
Trigger: CCCTTCTCCTAGCCTGCTTTGTGCAAACAAGTCCCAAGCAGGAGAAGATGAAGATGGATTGCCACAAAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412168.7
ENST00000469384.1
ENST00000550775.5
ENST00000551639.1
CDS CAA 72 bp ACCCTTAACTGTGTAGTCATGACTAGTGTTTGTAGATaGCTAGTCTGGGGGCCTGAGGTCTTTGCCCACCTC +
Preference number: 6 (lower is better)
Translates to: TLNCVVMTSVCR*LVWGPEVFAHL
Trigger: GAGGTGGGCAAAGACCTCAGGCCCCCAGACTAGCAATCTACAAACACTAGTCATGACTACACAGTTAAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412168.7
CDS CAA 72 bp TCGTCTTTGTGGCAATCCATCTTCATCTTCTCCTGCTaGGGACTTGTTTGCACAAAGCAGGCTAGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: SSLWQSIFIFSC*GLVCTKQARRR
Trigger: CCTTCTCCTAGCCTGCTTTGTGCAAACAAGTCCCAAGCAGGAGAAGATGAAGATGGATTGCCACAAAGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412168.7
ENST00000469384.1
ENST00000550775.5
ENST00000551639.1
CDS CCA 72 bp CACTCATCAGCAGGTAGAGTAGAAAGAACACTGCCCTaGGAATCAGAAGCCAGCTCCATTGTTAAATTCCTT +
Preference number: 6 (lower is better)
Translates to: HSSAGRVERTLP*ESEASSIVKFL
Trigger: AAGGAATTTAACAATGGAGCTGGCTTCTGATTCCCAGGGCAGTGTTCTTTCTACTCTACCTGCTGATGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442674.6
ENST00000483784.1
CDS CAA 72 bp AAAGAACACTGCCCTGGGAATCAGAAGCCAGCTCCATaGTTAAATTCCTTTGTGAACCTGGGCAATTCCCAT +
Preference number: 6 (lower is better)
Translates to: KEHCPGNQKPAP*LNSFVNLGNSH
Trigger: ATGGGAATTGCCCAGGTTCACAAAGGAATTTAACAATGGAGCTGGCTTCTGATTCCCAGGGCAGTGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442674.6
ENST00000483784.1
CDS GCA 72 bp ATACTGCTTGAAGGAAACATATTCATTCTTATTAAGTaGGATGGCCTCATAGTCATAGATGGTGCCTTTCTC +
Preference number: 6 (lower is better)
Translates to: ILLEGNIFILIK*DGLIVIDGAFL
Trigger: GAGAAAGGCACCATCTATGACTATGAGGCCATCGCACTTAATAAGAATGAATATGTTTCCTTCAAGCAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000412168.7
ENST00000442674.6
ENST00000469384.1
ENST00000483784.1
ENST00000550775.5
ENST00000551639.1