Pregenerated sensors for GPR27 (Homo sapiens)
Ensembl gene IDs: ENSG00000170837Ensembl transcript IDs: ENST00000304411.3
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTTGATGTAGTACTCTGCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTATGTGCGGAGCTGGAGTaGGCTGAGCATCCTACTCCT | + |
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Preference number: 2 (lower is better) Translates to: FDVVLCFSEPSQSSNHNLCAELE*AEHPTP Trigger: AGGAGTAGGATGCTCAGCCCACTCCAGCTCCGCACA...TAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGCAGAGTACTACATCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTACCGCTACAAAAAGACTGCAGGGCCTATTGTCAGGAAGAAAGTCGAGTACGAATGTGCGGAGCTaGAGTGGGCTGAGCATCCTA | + |
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Preference number: 2 (lower is better) Translates to: VSTATKRLQGLLSGRKSSTNVRS*SGLSIL Trigger: TAGGATGCTCAGCCCACTCCAGCTCCGCACATTCGT...ACTCGACTTTCTTCCTGACAATAGGCCCTGCAGTCTTTTTGTAGCGGTACTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| 3UTR-3UTR TCA 90 bp | AATCTAACTTGTGAAGAAGTCCCCCTAGGTTCCTCTACTTCACTGCAAAATGTAGGAGCTGGAGTGGGCTaGGCATCCTACTCCTCACCC | + |
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Preference number: 2 (lower is better) Translates to: NLTCEEVPLGSSTSLQNVGAGVG*ASYSSP Trigger: GGGTGAGGAGTAGGATGCTCAGCCCACTCCAGCTCC...TACATTTTGCAGTGAAGTAGAGGAACCTAGGGGGACTTCTTCACAAGTTAGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTATACACACGAACACATGCCGCTACAAAAAGACTaGAGGGCCTATTGTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: ASQSPPNPRTTIYTHEHMPLQKD*RAYCQE Trigger: TTCCTGACAATAGGCCCTGCAGTCTTTTTGTAGCGG...CATGTGTTCGTGTGTATAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| 3UTR-3UTR CCA 90 bp | CACTTGAGGTTGTCAAAAATAGCTTCTGTAGAAAACTGGCCATGGTCTTTAGGAGCCAAAGGGAAAGGCTaGGTTGGGGGTCTATGTGGC | + |
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Preference number: 2 (lower is better) Translates to: HLRLSKIASVENWPWSLGAKGKG*VGGLCG Trigger: GCCACATAGACCCCCAACCCAGCCTTTCCCTTTGGC...TCCTAAAGACCATGGCCAGTTTTCTACAGAAGCTATTTTTGACAACCTCAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGATGTAGTACTCTGCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTACACTTCGAGTCATTTTaGAGGCAGCTTAGAAAATTA | + |
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Preference number: 2 (lower is better) Translates to: FDVVLCFSEPSQSSNHNLHFESF*RQLRKL Trigger: TAATTTTCTAAGCTGCCTTCAAAATGACTCGAAGTG...TAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGCAGAGTACTACATCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| 3UTR-3UTR CAA 90 bp | TTTGATGTAGTACTCTGCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTAAGACTGCAGGGCCTATaGTCAGGAAGAAAGTCGAGT | + |
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Preference number: 3 (lower is better) Translates to: FDVVLCFSEPSQSSNHNLRLQGL*SGRKSS Trigger: ACTCGACTTTCTTCCTGACAATAGGCCCTGCAGTCT...TAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGCAGAGTACTACATCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| 3UTR TCA 72 bp | TGCTTCCAACAGAAGATCCTCAAGAAATCTAACTTGTaGAGAAGTCCCCCTAGGTTCCTCTACTTCACTGCA | + |
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Preference number: 3 (lower is better) Translates to: CFQQKILKKSNL*RSPPRFLYFTA Trigger: TGCAGTGAAGTAGAGGAACCTAGGGGGACTTCTTCACAAGTTAGATTTCTTGAGGATCTTCTGTTGGAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR TCA 90 bp | CCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAATGTGCGGAGCTGGAGTGTGGCCAGGTAGCGGGTaGCGCCCACGCCCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PIVRKKVELGGRMCGAGVWPGSG*RPRPAA Trigger: TGCTGCTGGGCGTGGGCGTCACCCGCTACCTGGCCA...CACTCCAGCTCCGCACATTCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | CCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAATGTGCGGAGCTGGAGTGGGACCCGCAGGTAGCTaGCCACGACGTAGGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: PIVRKKVELGGRMCGAGVGPAGS*PRRRAP Trigger: GGGGGCCCTACGTCGTGGCCAGCTACCTGCGGGTCC...CACTCCAGCTCCGCACATTCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | CCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAATGTGCGGAGCTGGAGTGGATGGGTCGCCTGGGTaGTCCGGGGGCTCTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PIVRKKVELGGRMCGAGVDGSPG*SGGSGS Trigger: GCTGCCAGAGCCCCCGGACCACCCAGGCGACCCATC...CACTCCAGCTCCGCACATTCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR TCA 90 bp | TTTGATGTAGTACTCTGCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTAAGGTCCAGTCGTGGCTaGCGGCGGGCACCAGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: FDVVLCFSEPSQSSNHNLRSSRG*RRAPGA Trigger: CGCGCCTGGTGCCCGCCGTCAGCCACGACTGGACCT...TAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGCAGAGTACTACATCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR TCA 90 bp | GCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTATACACACGAACACATGAGCACACGACGGGGTTaGTGCCGGCCTGCGCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: ASQSPPNPRTTIYTHEHMSTRRG*CRPARR Trigger: CCTTCGCGCAGGCCGGCATCAACCCCGTCGTGTGCT...CATGTGTTCGTGTGTATAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAAGACTGCAGGGCCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAGGAAGGCGAGCAGCTTaGAGCCCAGCGCGCCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: YKKTAGPIVRKKVELGGRGRRAA*SPARPA Trigger: CGCCGGGCGCGCTGGGCTGCAAGCTGCTCGCCTTCC...TCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGGCCCTGCAGTCTTTTTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | AGGAACCACACATGGAATAAAAGACGTCAGTACCGCTACAAAAAGACTGCAGGGACCGCCGTCCAGCACTaGCGGGAAGGCCGCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RNHTWNKRRQYRYKKTAGTAVQH*REGRGQ Trigger: CTGGCCGCGGCCTTCCCGCCAGTGCTGGACGGCGGT...CCCTGCAGTCTTTTTGTAGCGGTACTGACGTCTTTTATTCCATGTGTGGTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAAGACTGCAGGGCCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAGGGCGCGGTGCAGGCTaGGCTCCCGCACGATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: YKKTAGPIVRKKVELGGRGRGAG*APARSA Trigger: TGCTGATCGTGCGGGAGCGCAGCCTGCACCGCGCCC...TCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGGCCCTGCAGTCTTTTTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR GCA 90 bp | GCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTATACACACGAACACATGGGGTTGATGCCGGCCTaGGCGAAGGTCAGCCACACG | + |
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Preference number: 4 (lower is better) Translates to: ASQSPPNPRTTIYTHEHMGLMPA*AKVSHT Trigger: CGTGTGGCTGACCTTCGCGCAGGCCGGCATCAACCC...CATGTGTTCGTGTGTATAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | TTTGATGTAGTACTCTGCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTACAGGGATGGGTCGCCTaGGTGGTCCGGGGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FDVVLCFSEPSQSSNHNLQGWVA*VVRGLW Trigger: CCAGAGCCCCCGGACCACCCAGGCGACCCATCCCTG...TAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGCAGAGTACTACATCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR GCA 90 bp | AGGAACCACACATGGAATAAAAGACGTCAGTACCGCTACAAAAAGACTGCAGGGGCCGGCCAGGCGCTCTaGATAGAAGCGGTGGTGCGC | + |
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Preference number: 4 (lower is better) Translates to: RNHTWNKRRQYRYKKTAGAGQAL*IEAVVR Trigger: GCGCACCACCGCTTCTATGCAGAGCGCCTGGCCGGC...CCCTGCAGTCTTTTTGTAGCGGTACTGACGTCTTTTATTCCATGTGTGGTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAAGACTGCAGGGCCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAGGTAGACGAGGTGCGTaGCGCCCACCACCACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: YKKTAGPIVRKKVELGGRGRRGA*RPPPRP Trigger: TGGCCGTGGTGGTGGGCGCCACGCACCTCGTCTACC...TCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGGCCCTGCAGTCTTTTTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR TCA 90 bp | CCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAATGTGCGGAGCTGGAGTGGCAGGAAGAGCAGCGTaGCGGCGTAGAACATCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PIVRKKVELGGRMCGAGVAGRAA*RRRTSC Trigger: GCAAGATGTTCTACGCCGTCACGCTGCTCTTCCTGC...CACTCCAGCTCCGCACATTCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | GTCAGTACCGCTACAAAAAGACTGCAGGGCCTATTGTCAGGAAGAAAGTCGAGTTGGCAGCAGGGGAACTaGGCCCTGAAGCAGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VSTATKRLQGLLSGRKSSWQQGN*ALKQSL Trigger: GAGGGACTGCTTCAGGGCCCAGTTCCCCTGCTGCCA...ACTCGACTTTCTTCCTGACAATAGGCCCTGCAGTCTTTTTGTAGCGGTACTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR TCA 90 bp | TTTGATGTAGTACTCTGCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTATGCGGCGGTCGTGGATaGAGAAGAGCAGGCGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: FDVVLCFSEPSQSSNHNLCGGRG*RRAGGG Trigger: ACCTCCGCCTGCTCTTCTTCATCCACGACCGCCGCA...TAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGCAGAGTACTACATCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR TCA 90 bp | GTCAGTACCGCTACAAAAAGACTGCAGGGCCTATTGTCAGGAAGAAAGTCGAGTCCCTCAGCTCCCTGTTaGAGAGGAAGCACACGACGG | + |
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Preference number: 4 (lower is better) Translates to: VSTATKRLQGLLSGRKSSPSAPC*RGSTRR Trigger: CCGTCGTGTGCTTCCTCTTCAACAGGGAGCTGAGGG...ACTCGACTTTCTTCCTGACAATAGGCCCTGCAGTCTTTTTGTAGCGGTACTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR TCA 90 bp | TTTGATGTAGTACTCTGCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTAGGAGCTGGAGTGGGCTaGGCATCCTACTCCTCACCC | + |
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Preference number: 4 (lower is better) Translates to: FDVVLCFSEPSQSSNHNLGAGVG*ASYSSP Trigger: GGGTGAGGAGTAGGATGCTCAGCCCACTCCAGCTCC...TAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGCAGAGTACTACATCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR GCA 90 bp | TTTGATGTAGTACTCTGCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTAGCGCGAACAGCACGTTaGCCGCTAGGCTCACGCACA | + |
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Preference number: 4 (lower is better) Translates to: FDVVLCFSEPSQSSNHNLARTAR*PLGSRT Trigger: TGTGCGTGAGCCTAGCGGGCAACGTGCTGTTCGCGC...TAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGCAGAGTACTACATCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | CACTTGAGGTTGTCAAAAATAGCTTCTGTAGAAAACTGGCCATGGTCTTTAGGAGTGGCGCCCGGGCCGTaGAAGGTCCAGTCGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HLRLSKIASVENWPWSLGVAPGP*KVQSWL Trigger: CAGCCACGACTGGACCTTCCACGGCCCGGGCGCCAC...TCCTAAAGACCATGGCCAGTTTTCTACAGAAGCTATTTTTGACAACCTCAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | CCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAATGTGCGGAGCTGGAGTGACGAATGTGCGGAGCTaGAGTGGGCTGAGCATCCTA | + |
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Preference number: 4 (lower is better) Translates to: PIVRKKVELGGRMCGAGVTNVRS*SGLSIL Trigger: TAGGATGCTCAGCCCACTCCAGCTCCGCACATTCGT...CACTCCAGCTCCGCACATTCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR GCA 90 bp | TTTGATGTAGTACTCTGCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTAGCAGCACAAGGACCCTaGAGCCGGCAATTCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: FDVVLCFSEPSQSSNHNLAAQGP*SRQFRG Trigger: CCCTCTGAATTGCCGGCTGCAGGGTCCTTGTGCTGC...TAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGCAGAGTACTACATCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | TCAGTACAATCCAAGTGTCTGTCCACTTCGAGTCATTTTGAAGGCAGCTTAGAAAGCAGGAAGGCGGCGTaGAAGCAGAAGAGCGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SVQSKCLSTSSHFEGSLESRKAA*KQKSAA Trigger: GGCCGCGCTCTTCTGCTTCCACGCCGCCTTCCTGCT...TTCTAAGCTGCCTTCAAAATGACTCGAAGTGGACAGACACTTGGATTGTACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | TCAGTACAATCCAAGTGTCTGTCCACTTCGAGTCATTTTGAAGGCAGCTTAGAATTCAGGTCGCAGGGATaGGTCGCCTGGGTGGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: SVQSKCLSTSSHFEGSLEFRSQG*VAWVVR Trigger: CCGGACCACCCAGGCGACCCATCCCTGCGACCTGAA...TTCTAAGCTGCCTTCAAAATGACTCGAAGTGGACAGACACTTGGATTGTACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | AGGAACCACACATGGAATAAAAGACGTCAGTACCGCTACAAAAAGACTGCAGGGATCTTGCGGCGGTCGTaGATGAAGAAGAGCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RNHTWNKRRQYRYKKTAGILRRS*MKKSRR Trigger: CCGCCTGCTCTTCTTCATCCACGACCGCCGCAAGAT...CCCTGCAGTCTTTTTGTAGCGGTACTGACGTCTTTTATTCCATGTGTGGTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | AATCTAACTTGTGAAGAAGTCCCCCTAGGTTCCTCTACTTCACTGCAAAATGTATGGAAGGTCCAGTCGTaGCTGACGGCGGGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: NLTCEEVPLGSSTSLQNVWKVQS*LTAGTR Trigger: CCTGGTGCCCGCCGTCAGCCACGACTGGACCTTCCA...TACATTTTGCAGTGAAGTAGAGGAACCTAGGGGGACTTCTTCACAAGTTAGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | TCAGTACAATCCAAGTGTCTGTCCACTTCGAGTCATTTTGAAGGCAGCTTAGAAGGTTGGGGGTCTATGTaGCGGGGCCTCCCTCATAAA | + |
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Preference number: 4 (lower is better) Translates to: SVQSKCLSTSSHFEGSLEGWGSM*RGLPHK Trigger: TTTATGAGGGAGGCCCCGCCACATAGACCCCCAACC...TTCTAAGCTGCCTTCAAAATGACTCGAAGTGGACAGACACTTGGATTGTACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | TCAGTACAATCCAAGTGTCTGTCCACTTCGAGTCATTTTGAAGGCAGCTTAGAAGCCAAAGGGAAAGGCTaGGTTGGGGGTCTATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SVQSKCLSTSSHFEGSLEAKGKG*VGGLCG Trigger: GCCACATAGACCCCCAACCCAGCCTTTCCCTTTGGC...TTCTAAGCTGCCTTCAAAATGACTCGAAGTGGACAGACACTTGGATTGTACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | AATCTAACTTGTGAAGAAGTCCCCCTAGGTTCCTCTACTTCACTGCAAAATGTATGTGCGGAGCTGGAGTaGGCTGAGCATCCTACTCCT | + |
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Preference number: 4 (lower is better) Translates to: NLTCEEVPLGSSTSLQNVCAELE*AEHPTP Trigger: AGGAGTAGGATGCTCAGCCCACTCCAGCTCCGCACA...TACATTTTGCAGTGAAGTAGAGGAACCTAGGGGGACTTCTTCACAAGTTAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | CCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAATGTGCGGAGCTGGAGTGCAGTTGTCACTGACGTaGTTTTTAGCAGCAGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: PIVRKKVELGGRMCGAGVQLSLT*FLAAES Trigger: ACTTTCTGCTGCTAAAAACCACGTCAGTGACAACTG...CACTCCAGCTCCGCACATTCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR TCA 90 bp | CCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAATGTGCGGAGCTGGAGTGTTAGGAAACGTTGCATaGAGAAAATTAGTACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: PIVRKKVELGGRMCGAGVLGNVA*RKLVQP Trigger: AGGCTGTACTAATTTTCTTCATGCAACGTTTCCTAA...CACTCCAGCTCCGCACATTCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAAGACTGCAGGGCCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGATTTGATGTAGTACTCTaGTTCTCAGAGCCCTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: YKKTAGPIVRKKVELGGRFDVVL*FSEPSQ Trigger: TTGGGAGGGCTCTGAGAAGCAGAGTACTACATCAAA...TCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGGCCCTGCAGTCTTTTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR GCA 90 bp | TCAGTACAATCCAAGTGTCTGTCCACTTCGAGTCATTTTGAAGGCAGCTTAGAATCCCTCATAAACCAATaGCTTTCAGGTCGCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: SVQSKCLSTSSHFEGSLESLINQ*LSGRRD Trigger: ATCCCTGCGACCTGAAAGGCATTGGTTTATGAGGGA...TTCTAAGCTGCCTTCAAAATGACTCGAAGTGGACAGACACTTGGATTGTACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR GCA 90 bp | CCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAATGTGCGGAGCTGGAGTGATACACACGAACACATaGAATACTGTATTTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PIVRKKVELGGRMCGAGVIHTNT*NTVFFS Trigger: GGAGAAAAATACAGTATTGCATGTGTTCGTGTGTAT...CACTCCAGCTCCGCACATTCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | TACAAAAAGACTGCAGGGCCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAGTAGAAAACTGGCCATaGTCTTTAGGAAACGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: YKKTAGPIVRKKVELGGRVENWP*SLGNVA Trigger: TGCAACGTTTCCTAAAGACCATGGCCAGTTTTCTAC...TCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGGCCCTGCAGTCTTTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CCA 90 bp | GTCAGTACCGCTACAAAAAGACTGCAGGGCCTATTGTCAGGAAGAAAGTCGAGTAAAAGGAACCACACATaGAATAAAAGACGTCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: VSTATKRLQGLLSGRKSSKRNHT*NKRRQY Trigger: GTACTGACGTCTTTTATTCCATGTGTGGTTCCTTTT...ACTCGACTTTCTTCCTGACAATAGGCCCTGCAGTCTTTTTGTAGCGGTACTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR TCA 90 bp | AATCTAACTTGTGAAGAAGTCCCCCTAGGTTCCTCTACTTCACTGCAAAATGTAAAGAAATCTAACTTGTaGAGAAGTCCCCCTAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: NLTCEEVPLGSSTSLQNVKKSNL*RSPPRF Trigger: GAACCTAGGGGGACTTCTTCACAAGTTAGATTTCTT...TACATTTTGCAGTGAAGTAGAGGAACCTAGGGGGACTTCTTCACAAGTTAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR GCA 90 bp | TTTGATGTAGTACTCTGCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTAACTGATCTCCATCTCTaGTCTTTAAGTTCAATATCA | + |
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Preference number: 4 (lower is better) Translates to: FDVVLCFSEPSQSSNHNLTDLHL*SLSSIS Trigger: TGATATTGAACTTAAAGAGCAGAGATGGAGATCAGT...TAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGCAGAGTACTACATCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR GCA 90 bp | TACAAAAAGACTGCAGGGCCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAGTTTCCATTCAAGATTaGTATAATACAGAGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: YKKTAGPIVRKKVELGGRVSIQD*YNTESS Trigger: ACTGCTCTCTGTATTATAGCAATCTTGAATGGAAAC...TCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGGCCCTGCAGTCTTTTTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR TCA 90 bp | AATCTAACTTGTGAAGAAGTCCCCCTAGGTTCCTCTACTTCACTGCAAAATGTACACTTCGAGTCATTTTaGAGGCAGCTTAGAAAATTA | + |
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Preference number: 4 (lower is better) Translates to: NLTCEEVPLGSSTSLQNVHFESF*RQLRKL Trigger: TAATTTTCTAAGCTGCCTTCAAAATGACTCGAAGTG...TACATTTTGCAGTGAAGTAGAGGAACCTAGGGGGACTTCTTCACAAGTTAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS GCA 90 bp | AGGCGGCGTGGAAGCAGAAGAGCGCGGCCAGGAAGGCGAGCAGCTTaGAGCCCAGCGCGCCCGGCGGCGCCCCCGCCGCGGCCGCCGCAC | + |
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Preference number: 5 (lower is better) Translates to: RRRGSRRARPGRRAA*SPARPAAPPPRPPH Trigger: GTGCGGCGGCCGCGGCGGGGGCGCCGCCGGGCGCGCTGGGCTGCAAGCTGCTCGCCTTCCTGGCCGCGCTCTTCTGCTTCCACGCCGCCT 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS CCA 90 bp | GGCGTGGGCCCGCGGCCGAAGCCCGCCGTCCAGTTGGCGGCCGCCTaGCCGGTGGCGCCCGGGCCGTGGAAGGTCCAGTCGTGGCTGACG | + |
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Preference number: 5 (lower is better) Translates to: GVGPRPKPAVQLAAA*PVAPGPWKVQSWLT Trigger: CGTCAGCCACGACTGGACCTTCCACGGCCCGGGCGCCACCGGCCAGGCGGCCGCCAACTGGACGGCGGGCTTCGGCCGCGGGCCCACGCC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS TCA 90 bp | CGGCGGGCACCAGGCGCGCGGGCCGCATCTTGCGGCGGTCGTGGATaGAGAAGAGCAGGCGGAGGTAGACGAGGTGCGTGGCGCCCACCA | + |
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Preference number: 5 (lower is better) Translates to: RRAPGARAASCGGRG*RRAGGGRRGAWRPP Trigger: TGGTGGGCGCCACGCACCTCGTCTACCTCCGCCTGCTCTTCTTCATCCACGACCGCCGCAAGATGCGGCCCGCGCGCCTGGTGCCCGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS CCA 90 bp | CGTCACCGTCCGAGCCAAAGGGAAAGGCTGGGTTGGGGGTCTATGTaGCGGGGCCTCCCTCATAAACCAATGCCTTTCAGGTCGCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: RHRPSQRERLGWGSM*RGLPHKPMPFRSQG Trigger: TCCCTGCGACCTGAAAGGCATTGGTTTATGAGGGAGGCCCCGCCACATAGACCCCCAACCCAGCCTTTCCCTTTGGCTCGGACGGTGACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CAA 90 bp | GCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTATACACACGAACACATGCTGAGCGTGGCCAGCTaGAGGCCCAGGGCGGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: ASQSPPNPRTTIYTHEHMLSVAS*RPRAAA Trigger: GGCGGCCGCCCTGGGCCTCAAGCTGGCCACGCTCAG...CATGTGTTCGTGTGTATAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CAA 90 bp | CCTATTGTCAGGAAGAAAGTCGAGTTAGGAGGACGAATGTGCGGAGCTGGAGTGAAGCACACGACGGGGTaGATGCCGGCCTGCGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: PIVRKKVELGGRMCGAGVKHTTG*MPACAK Trigger: CTTCGCGCAGGCCGGCATCAACCCCGTCGTGTGCTT...CACTCCAGCTCCGCACATTCGTCCTCCTAACTCGACTTTCTTCCTGACAATAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CAA 90 bp | TTTGATGTAGTACTCTGCTTCTCAGAGCCCTCCCAATCCTCGAACCACAATCTACGCGCGGGCCGCATCTaGCGGCGGTCGTGGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: FDVVLCFSEPSQSSNHNLRAGRI*RRSWMK Trigger: CTTCATCCACGACCGCCGCAAGATGCGGCCCGCGCG...TAGATTGTGGTTCGAGGATTGGGAGGGCTCTGAGAAGCAGAGTACTACATCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CAA 90 bp | CACTTGAGGTTGTCAAAAATAGCTTCTGTAGAAAACTGGCCATGGTCTTTAGGAAGGAAGGCGAGCAGCTaGCAGCCCAGCGCGCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: HLRLSKIASVENWPWSLGRKASS*QPSAPG Trigger: GCCGGGCGCGCTGGGCTGCAAGCTGCTCGCCTTCCT...TCCTAAAGACCATGGCCAGTTTTCTACAGAAGCTATTTTTGACAACCTCAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CAA 90 bp | AATCTAACTTGTGAAGAAGTCCCCCTAGGTTCCTCTACTTCACTGCAAAATGTAAGCGCGAACAGCACGTaGCCCGCTAGGCTCACGCAC | + |
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Preference number: 5 (lower is better) Translates to: NLTCEEVPLGSSTSLQNVSANST*PARLTH Trigger: GTGCGTGAGCCTAGCGGGCAACGTGCTGTTCGCGCT...TACATTTTGCAGTGAAGTAGAGGAACCTAGGGGGACTTCTTCACAAGTTAGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS-3UTR CAA 90 bp | AGGAACCACACATGGAATAAAAGACGTCAGTACCGCTACAAAAAGACTGCAGGGAGCCTCTTCTCCGTCTaGAATTCTTCCAGCACGAGG | + |
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Preference number: 5 (lower is better) Translates to: RNHTWNKRRQYRYKKTAGSLFSV*NSSSTR Trigger: CCTCGTGCTGGAAGAATTCAAGACGGAGAAGAGGCT...CCCTGCAGTCTTTTTGTAGCGGTACTGACGTCTTTTATTCCATGTGTGGTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS TCA 72 bp | CGGTGGCGCCCGGGCCGTGGAAGGTCCAGTCGTGGCTaGCGGCGGGCACCAGGCGCGCGGGCCGCATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: RWRPGRGRSSRG*RRAPGARAASC Trigger: GCAAGATGCGGCCCGCGCGCCTGGTGCCCGCCGTCAGCCACGACTGGACCTTCCACGGCCCGGGCGCCACCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS CAA 72 bp | TGGCTGACGGCGGGCACCAGGCGCGCGGGCCGCATCTaGCGGCGGTCGTGGATGAAGAAGAGCAGGCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: WLTAGTRRAGRI*RRSWMKKSRRR Trigger: CCTCCGCCTGCTCTTCTTCATCCACGACCGCCGCAAGATGCGGCCCGCGCGCCTGGTGCCCGCCGTCAGCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS CAA 90 bp | CGGTGCAGGCTGCGCTCCCGCACGATCAGCAGCGCGAACAGCACGTaGCCCGCTAGGCTCACGCACAGCAGCAGGCTGAGCGTGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RCRLRSRTISSANST*PARLTHSSRLSVAS Trigger: GCTGGCCACGCTCAGCCTGCTGCTGTGCGTGAGCCTAGCGGGCAACGTGCTGTTCGCGCTGCTGATCGTGCGGGAGCGCAGCCTGCACCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS GCA 72 bp | GGTCGAGCAGCAGGTAGTACGGGGCGCGGTGCAGGCTaGGCTCCCGCACGATCAGCAGCGCGAACAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: GRAAGSTGRGAG*APARSAARTAR Trigger: ACGTGCTGTTCGCGCTGCTGATCGTGCGGGAGCGCAGCCTGCACCGCGCCCCGTACTACCTGCTGCTCGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS CAA 72 bp | CTGCGCTCCCGCACGATCAGCAGCGCGAACAGCACGTaGCCCGCTAGGCTCACGCACAGCAGCAGGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LRSRTISSANST*PARLTHSSRLS Trigger: GCTCAGCCTGCTGCTGTGCGTGAGCCTAGCGGGCAACGTGCTGTTCGCGCTGCTGATCGTGCGGGAGCGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS GCA 72 bp | GGGGGTCTATGTGGCGGGGCCTCCCTCATAAACCAATaGCTTTCAGGTCGCAGGGATGGGTCGCCTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GGLCGGASLINQ*LSGRRDGSPGW Trigger: CCACCCAGGCGACCCATCCCTGCGACCTGAAAGGCATTGGTTTATGAGGGAGGCCCCGCCACATAGACCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS CCA 72 bp | CTCCCTCATAAACCAATGCCTTTCAGGTCGCAGGGATaGGTCGCCTGGGTGGTCCGGGGGCTCTGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LPHKPMPFRSQG*VAWVVRGLWQQ Trigger: CTGCTGCCAGAGCCCCCGGACCACCCAGGCGACCCATCCCTGCGACCTGAAAGGCATTGGTTTATGAGGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS CAA 72 bp | CTCAGCTCCCTGTTGAAGAGGAAGCACACGACGGGGTaGATGCCGGCCTGCGCGAAGGTCAGCCACACGGAG | + |
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Preference number: 6 (lower is better) Translates to: LSSLLKRKHTTG*MPACAKVSHTE Trigger: CTCCGTGTGGCTGACCTTCGCGCAGGCCGGCATCAACCCCGTCGTGTGCTTCCTCTTCAACAGGGAGCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS CCA 72 bp | CAACGTCACCGTCCGAGCCAAAGGGAAAGGCTGGGTTaGGGGTCTATGTGGCGGGGCCTCCCTCATAAACCA | + |
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Preference number: 6 (lower is better) Translates to: QRHRPSQRERLG*GSMWRGLPHKP Trigger: TGGTTTATGAGGGAGGCCCCGCCACATAGACCCCCAACCCAGCCTTTCCCTTTGGCTCGGACGGTGACGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS CCA 72 bp | CCGAGCCAAAGGGAAAGGCTGGGTTGGGGGTCTATGTaGCGGGGCCTCCCTCATAAACCAATGCCTTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PSQRERLGWGSM*RGLPHKPMPFR Trigger: CCTGAAAGGCATTGGTTTATGAGGGAGGCCCCGCCACATAGACCCCCAACCCAGCCTTTCCCTTTGGCTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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| CDS CCA 72 bp | AGATACAACGTCACCGTCCGAGCCAAAGGGAAAGGCTaGGTTGGGGGTCTATGTGGCGGGGCCTCCCTCATA | + |
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Preference number: 6 (lower is better) Translates to: RYNVTVRAKGKG*VGGLCGGASLI Trigger: TATGAGGGAGGCCCCGCCACATAGACCCCCAACCCAGCCTTTCCCTTTGGCTCGGACGGTGACGTTGTATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304411.3 |
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