RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR146 (Homo sapiens)

Ensembl gene IDs: ENSG00000164849

Ensembl transcript IDs: ENST00000397095.2, ENST00000427680.1, ENST00000444847.2, ENST00000474396.1, ENST00000481403.1

Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATaGCAGCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGT +
Preference number: 1 (lower is better)
Translates to: CVFGRRTGLGETQAR*QPRGPQPWPKSGIC
Trigger: ACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGCTGGCATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR CCA 90 bp GAAGGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTaGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGCCAGCC +
Preference number: 1 (lower is better)
Translates to: EGEEAFADVDLELRV*ETHRPRGDSSQMPA
Trigger: GGCTGGCATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR GCA 90 bp AGGAGGCTGAAGGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTaGGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGA +
Preference number: 1 (lower is better)
Translates to: RRLKARRLLRMWTLS*VFGRRTGLGETQAR
Trigger: TCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTTCAGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR TCA 90 bp GGTGTCAGGGACATTTGGTGGCTGAGGAGAGCGCGTCACTGCTATTaGATAGCTCCATTTAACACCAGCCATGTCTCCGCGTCTCAGGCA +
Preference number: 1 (lower is better)
Translates to: GVRDIWWLRRARHCY*IAPFNTSHVSASQA
Trigger: TGCCTGAGACGCGGAGACATGGCTGGTGTTAAATGGAGCTATTCAATAGCAGTGACGCGCTCTCCTCAGCCACCAAATGTCCCTGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR GCA 90 bp GCTAGCACACGCCGCCCACTGGCAGGGCCCGGCCACCCTGGCTGTTaGCATTCTTTCGTAGGGTTTTGTTCATTTTACTATTTGTCATTT +
Preference number: 1 (lower is better)
Translates to: ASTRRPLAGPGHPGC*HSFVGFCSFYYLSF
Trigger: AAATGACAAATAGTAAAATGAACAAAACCCTACGAAAGAATGGCAACAGCCAGGGTGGCCGGGCCCTGCCAGTGGGCGGCGTGTGCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR CCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGCTTGAGCTGCGTGTTTaGGAGACGCACAGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGLELRV*ETHRPR
Trigger: CCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR CCA 90 bp CCTGTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGCTTGAGCTGCGTGTTTaGGAGACGCACAGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: PVVTAAHPAGLASTRRPLLELRV*ETHRPR
Trigger: CCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG...CAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR TCA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCATGCGGATGTGGACCTTaGGCTGCGTGTTTGGGAGAC +
Preference number: 2 (lower is better)
Translates to: VVTAAHPAGLASTRRPLACGCGP*AACLGD
Trigger: GTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCA...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR CCA 90 bp CCTGTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGAGGCTTTTGCGGATGTaGACCTTGAGCTGCGTGTTT +
Preference number: 2 (lower is better)
Translates to: PVVTAAHPAGLASTRRPLRLLRM*TLSCVF
Trigger: AAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCT...CAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR GCA 90 bp GCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGAGACTCAAGCCAGATaGCAGCCACGGGGACCACAG +
Preference number: 2 (lower is better)
Translates to: AFADVDLELRVWETHRPRETQAR*QPRGPQ
Trigger: CTGTGGTCCCCGTGGCTGGCATCTGGCTTGAGTCTC...CCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR CAA 90 bp ATGCTGAGGAGGCTGAAGGCGAGGAGGCTTTTGCGGATGTGGACCTaGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAA +
Preference number: 2 (lower is better)
Translates to: MLRRLKARRLLRMWT*SCVFGRRTGLGETQ
Trigger: TTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTTCAGCCTCCTCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR CCA 90 bp ACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGACAGCTCGTCTCCTTCTaGAAGGATGTGGGGAGCGTC +
Preference number: 2 (lower is better)
Translates to: TLSCVFGRRTGLGETQARQLVSF*KDVGSV
Trigger: GACGCTCCCCACATCCTTCCAGAAGGAGACGAGCTG...TCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR CCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGCAGCTCGTCTCCTTCTaGAAGGATGTGGGGAGCGTC +
Preference number: 2 (lower is better)
Translates to: LELRVWETHRPRGDSSQMQLVSF*KDVGSV
Trigger: GACGCTCCCCACATCCTTCCAGAAGGAGACGAGCTG...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR CCA 90 bp ACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGACCTTCTGGAAGGATGTaGGGAGCGTCCAGGGTAACT +
Preference number: 2 (lower is better)
Translates to: TLSCVFGRRTGLGETQARPSGRM*GASRVT
Trigger: AGTTACCCTGGACGCTCCCCACATCCTTCCAGAAGG...TCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR CCA 90 bp AAGGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCCCTTCTGGAAGGATGTaGGGAGCGTCCAGGGTAACT +
Preference number: 2 (lower is better)
Translates to: KARRLLRMWTLSCVFGRRPSGRM*GASRVT
Trigger: AGTTACCCTGGACGCTCCCCACATCCTTCCAGAAGG...GCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR GCA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGTCCAGGGTAACTAAGTaGTCTGCGTCCACCAGAGTC +
Preference number: 2 (lower is better)
Translates to: TPPASLPAARLLLEGCGESRVTK*SASTRV
Trigger: GACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGA...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR CCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGGCCTTGGCCCAAGAGTaGCATTTGTGGGAAAAAGGA +
Preference number: 2 (lower is better)
Translates to: LELRVWETHRPRGDSSQMALAQE*HLWEKG
Trigger: TCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGC...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR GCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACGAAAAACACCCCTCCTaGTTCTCTTCCAGCAGCTCG +
Preference number: 2 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNEKHPS*FSSSSS
Trigger: CGAGCTGCTGGAAGAGAAGCAGGAGGGGTGTTTTTC...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR GCA 90 bp GACAAACTGAATGCTGAGGAGGCTGAAGGCGAGGAGGCTTTTGCGGATGTGGACTCCAGGGTAACTAAGTaGTCTGCGTCCACCAGAGTC +
Preference number: 2 (lower is better)
Translates to: DKLNAEEAEGEEAFADVDSRVTK*SASTRV
Trigger: GACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGA...GTCCACATCCGCAAAAGCCTCCTCGCCTTCAGCCTCCTCAGCATTCAGTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR GCA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTATGTGGACCTTGAGCTaGGTGTTTGGGAGACGCACA +
Preference number: 2 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCMWTLS*VFGRRT
Trigger: TGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACAT...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR GCA 90 bp ATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTGGTGACGAAAAACACCCCTCCTaGTTCTCTTCCAGCAGCTCG +
Preference number: 2 (lower is better)
Translates to: MSPRLRHFCEMFSEPCGDEKHPS*FSSSSS
Trigger: CGAGCTGCTGGAAGAGAAGCAGGAGGGGTGTTTTTC...GTCACCACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR GCA 72 bp GGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATaGCAGCCACGGGGACCACAGCCTTGGCCCAAGAGT +
Preference number: 3 (lower is better)
Translates to: GRRTGLGETQAR*QPRGPQPWPKS
Trigger: ACTCTTGGGCCAAGGCTGTGGTCCCCGTGGCTGGCATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR GCA 72 bp AAGGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTaGGTGTTTGGGAGACGCACAGGCCTCGGGGAGACT +
Preference number: 3 (lower is better)
Translates to: KARRLLRMWTLS*VFGRRTGLGET
Trigger: AGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR CCA 72 bp GAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTaGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAG +
Preference number: 3 (lower is better)
Translates to: EAFADVDLELRV*ETHRPRGDSSQ
Trigger: CTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR CCA 72 bp CTGAGGAGGCTGAAGGCGAGGAGGCTTTTGCGGATGTaGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGC +
Preference number: 3 (lower is better)
Translates to: LRRLKARRLLRM*TLSCVFGRRTG
Trigger: GCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTTCAGCCTCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR GCA 72 bp TCTGGAAGGATGTGGGGAGCGTCCAGGGTAACTAAGTaGTCTGCGTCCACCAGAGTCACGTCTCCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: SGRMWGASRVTK*SASTRVTSPQE
Trigger: CTCCTGGGGAGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACATCCTTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR-3UTR CAA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTTTGCGGATGTGGACCTaGAGCTGCGTGTTTGGGAGA +
Preference number: 3 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCLRMWT*SCVFGR
Trigger: TCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAA...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR TCA 72 bp GACATTTGGTGGCTGAGGAGAGCGCGTCACTGCTATTaGATAGCTCCATTTAACACCAGCCATGTCTCCGCG +
Preference number: 3 (lower is better)
Translates to: DIWWLRRARHCY*IAPFNTSHVSA
Trigger: CGCGGAGACATGGCTGGTGTTAAATGGAGCTATTCAATAGCAGTGACGCGCTCTCCTCAGCCACCAAATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGGGGGCGTGTCCTCCCTaGGGACGCGGGAGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGGACPP*GRGRVA
Trigger: TGCTACTCTCCCGCGTCCGCAGGGAGGACACGCCCC...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCACCACCAGAGCTCTGGTaGGGACCTGCGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VVTAAHPAGLASTRRPLAPPELW*GPARCC
Trigger: GCAGCAGCGCGCAGGTCCTCACCAGAGCTCTGGTGG...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS-3UTR CCA 90 bp CCTGTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGTAGCACAGGCCCACTaGCACGCCCACCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: PVVTAAHPAGLASTRRPLVAQAH*HAHHQA
Trigger: GGCCTGGTGGTGGGCGTGCCAGTGGGCCTGTGCTAC...CAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCACAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGCCAGCGCGTAGAGGGTaGCCAGTGCTGGCACCACGT +
Preference number: 4 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGPARRG*PVLAPR
Trigger: ACGTGGTGCCAGCACTGGCCACCCTCTACGCGCTGG...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGGCTCTGGTGAGGACCTaGGCGCTGCTGCGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGALVRT*ALLRFS
Trigger: AGAGAAGCGCAGCAGCGCGCAGGTCCTCACCAGAGC...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS-3UTR GCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGGTCCAGAGCCCAAACTaGGTGCACACGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGVQSPN*VHTVAT
Trigger: GGTGGCCACCGTGTGCACGCAGTTTGGGCTCTGGAC...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCATACGCCAGCACCTGCTaGACCCCCATGTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: VVTAAHPAGLASTRRPLAYASTC*TPMWSG
Trigger: CCCGGACCACATGGGGGTGCAGCAGGTGCTGGCGTA...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp CCTGTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCCTACGCCAGCACCTaGTGCACCCCCATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: PVVTAAHPAGLASTRRPLAYAST*CTPMWS
Trigger: GGACCACATGGGGGTGCAGCAGGTGCTGGCGTAGGC...CAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGGGCTCAGCAGGGCGGTaGAGTACATGGCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGGSAGR*STWPPV
Trigger: CACTGGTGGCCATGTACTCCACCGCCCTGCTGAGCC...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGACGAAGCCGCACACGTaGCGCGTGTTGTACACGCTG +
Preference number: 4 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGTKPHT*RVLYTL
Trigger: CAGCGTGTACAACACGCGGCACGTGTGCGGCTTCGT...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGGCGTGTTGTACACGCTaGCCATGTAGGTCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGACCTR*PCRSAA
Trigger: TGCCGCGGACCTACATGGCCAGCGTGTACAACACGC...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGGAGGGTGGCCAGTGCTaGCACCACGTAGCCGATGAA +
Preference number: 4 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGEGGQC*HHVADE
Trigger: TTCATCGGCTACGTGGTGCCAGCACTGGCCACCCTC...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAACTGCGTGCACACGGTaGCCACCAGCAGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VVTAAHPAGLASTRRPLATACTR*PPAACV
Trigger: CACACAGGCTGCTGGTGGCCACCGTGTGCACGCAGT...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAATCTGCAGTGCCACGTaGACTTCGCCGCCCACACTC +
Preference number: 4 (lower is better)
Translates to: VVTAAHPAGLASTRRPLAICSAT*TSPPTL
Trigger: GAGTGTGGGCGGCGAAGTCCACGTGGCACTGCAGAT...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp CCTGTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGAGGGCCCGGCCACCCTaGCTGTTGCCATTCTTTCGT +
Preference number: 4 (lower is better)
Translates to: PVVTAAHPAGLASTRRPLRARPP*LLPFFR
Trigger: ACGAAAGAATGGCAACAGCCAGGGTGGCCGGGCCCT...CAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp CCTGTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGTGCGGATGTGGACCTTaGGCTGCGTGTTTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: PVVTAAHPAGLASTRRPLCGCGP*AACLGD
Trigger: GTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCA...CAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGGCTGAGCACCAGGCCTaGCACTGCCATGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGAEHQA*HCHVDK
Trigger: TTTGTCAACATGGCAGTGGCAGGCCTGGTGCTCAGC...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGGCAGCTTCTGCGTTCTaGATCTTGGCGCACTCTAGC +
Preference number: 4 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGAASAF*ILAHSS
Trigger: GCTAGAGTGCGCCAAGATGCAGAACGCAGAAGCTGC...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCCCCAGAGCTGCAGCTCCACATaGCGGCCGGCGAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GASRVTKCSASTRVTSPQSCSST*RPARLR
Trigger: GCGGAGCCTCGCCGGCCGCCATGTGGAGCTGCAGCT...CTGGGGAGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACTCTCCCCAGGAGGGCTaGGCCGCCTACGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GEEAFADVDLELRVWETHSPQEG*AAYAST
Trigger: GGTGCTGGCGTAGGCGGCCCAGCCCTCCTGGGGAGA...GTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp CCTGTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGCTTCTGCGTTCTaGATCTTGGCGCACTCTAGC +
Preference number: 4 (lower is better)
Translates to: PVVTAAHPAGLASTRRPLAASAF*ILAHSS
Trigger: GCTAGAGTGCGCCAAGATGCAGAACGCAGAAGCTGC...CAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp CCTGTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGTCAGCCGTTGGAGCTTaGTGGGGAAGCTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PVVTAAHPAGLASTRRPLSAVGA*WGSSGS
Trigger: TGAACCAGAGCTTCCCCAGCAAGCTCCAACGGCTGA...CAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGGAAAAACACCCCTCCTaGTTCTCTTCCAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGEKHPS*FSSSSS
Trigger: CGAGCTGCTGGAAGAGAAGCAGGAGGGGTGTTTTTC...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGGCAGCGAGGAGAAGCTaGTCAGCAGCGCGCCACCCC +
Preference number: 4 (lower is better)
Translates to: LELRVWETHRPRGDSSQMAARRS*SAARHP
Trigger: GGGGTGGCGCGCTGCTGACCAGCTTCTCCTCGCTGC...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp TTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGCCAGCGCGTAGAGGGTaGCCAGTGCTGGCACCACGT +
Preference number: 4 (lower is better)
Translates to: LRMWTLSCVFGRRTGLGEPARRG*PVLAPR
Trigger: ACGTGGTGCCAGCACTGGCCACCCTCTACGCGCTGG...CTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGCAGGATCAGATAGTGTaGCGTCCAGAGCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGQDQIV*RPEPKL
Trigger: CAGTTTGGGCTCTGGACGCCACACTATCTGATCCTG...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGCCGTTGGAGCTTGCTaGGGAAGCTCTGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: VVTAAHPAGLASTRRPLAAVGAC*GSSGSC
Trigger: ACATGAACCAGAGCTTCCCCAGCAAGCTCCAACGGC...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACTGCTGCACCCCCATGTaGTCCGGGGAGCAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: GEEAFADVDLELRVWETHCCTPM*SGEQCR
Trigger: CCGGCACTGCTCCCCGGACCACATGGGGGTGCAGCA...GTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp GGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACCCTGGCCACTGTCGGTaGGCAGCATGGCGGGACAGA +
Preference number: 4 (lower is better)
Translates to: GEEAFADVDLELRVWETHPGHCR*AAWRDR
Trigger: TCTGTCCCGCCATGCTGCTCACCGACAGTGGCCAGG...GTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS-3UTR TCA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGTACATGGCCACCAGTaGGGACACATTGAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: VVTAAHPAGLASTRRPLAVHGHQ*GHIEGD
Trigger: ATCCCCTTCAATGTGTCCTCACTGGTGGCCATGTAC...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGGCACCACGTAGCCGATaGACACCAGCGTGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: LELRVWETHRPRGDSSQMAPRSR*TPAWRR
Trigger: CCGACGCCACGCTGGTGTTCATCGGCTACGTGGTGC...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGCTCAGAACCCTGTGGTaGCTGCGGCACACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LELRVWETHRPRGDSSQMLRTLW*LRHTRQ
Trigger: CTGCCGGGTGTGCCGCAGTCACCACAGGGTTCTGAG...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp AAGGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCGGGGCGTGTCCTCCCTaGGGACGCGGGAGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: KARRLLRMWTLSCVFGRRGACPP*GRGRVA
Trigger: TGCTACTCTCCCGCGTCCGCAGGGAGGACACGCCCC...GCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGTACGCCAGCACCTGCTaGACCCCCATGTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LELRVWETHRPRGDSSQMYASTC*TPMWSG
Trigger: CCCGGACCACATGGGGGTGCAGCAGGTGCTGGCGTA...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCCCCAGGAACCCTGTGGTGACTaGGGCACACCCGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GASRVTKCSASTRVTSPQEPCGD*GTPGRP
Trigger: AGGCCTGCCGGGTGTGCCGCAGTCACCACAGGGTTC...CTGGGGAGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGTGGTGCTGTGGGCCCTaGCCACTGTCGGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LELRVWETHRPRGDSSQMWCCGP*PLSVSS
Trigger: GCTGCTCACCGACAGTGGCCAGGGCCCACAGCACCA...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS-3UTR CCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACAGCTGCAGCTCCACATaGCGGCCGGCGAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNSCSST*RPARLR
Trigger: GCGGAGCCTCGCCGGCCGCCATGTGGAGCTGCAGCT...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp TTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGGGCTCAGCAGGGCGGTaGAGTACATGGCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LRMWTLSCVFGRRTGLGEGSAGR*STWPPV
Trigger: CACTGGTGGCCATGTACTCCACCGCCCTGCTGAGCC...CTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp TTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGCTGCGTTCTGCATCTTaGCGCACTCTAGCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: LRMWTLSCVFGRRTGLGELRSAS*RTLARG
Trigger: CCCGCGCGCTAGAGTGCGCCAAGATGCAGAACGCAG...CTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp GGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACCCAGCCCTGTGCCGTTaGACCAGCTGCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: GEEAFADVDLELRVWETHPALCR*TSCSST
Trigger: TGTGGAGCTGCAGCTGGTTCAACGGCACAGGGCTGG...GTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp ACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGACCAGCCCTGTGCCGTTaGACCAGCTGCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: TLSCVFGRRTGLGETQARPALCR*TSCSST
Trigger: TGTGGAGCTGCAGCTGGTTCAACGGCACAGGGCTGG...TCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCCCCAGGAAGGGGATCTGCAGTaGCACGTGGACTTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GASRVTKCSASTRVTSPQEGDLQ*HVDFAA
Trigger: GGCGGCGAAGTCCACGTGGCACTGCAGATCCCCTTC...CTGGGGAGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp TTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGGTAGGTCCGCGGCAGTaGACGCTCGATGTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: LRMWTLSCVFGRRTGLGEVGPRQ*TLDVVV
Trigger: GACCACTACATCGAGCGTGCACTGCCGCGGACCTAC...CTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGGTCCAGAGCCCAAACTaGGTGCACACGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: LELRVWETHRPRGDSSQMVQSPN*VHTVAT
Trigger: GGTGGCCACCGTGTGCACGCAGTTTGGGCTCTGGAC...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGGTGGCCCAAGCCTCTTaGTGCTGTGGGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TPPASLPAARLLLEGCGEVAQAS*CCGPWP
Trigger: TGGCCAGGGCCCACAGCACCAAGAGGCTTGGGCCAC...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS-3UTR CCA 90 bp GGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCCCCAGCTGCGTTCTGCATCTTaGCGCACTCTAGCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: GASRVTKCSASTRVTSPQLRSAS*RTLARG
Trigger: CCCGCGCGCTAGAGTGCGCCAAGATGCAGAACGCAG...CTGGGGAGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp CCTGTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGTAGCGGTAGAGAAGTaGTGTCACAAAGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PVVTAAHPAGLASTRRPLVAVEK*CHKAAG
Trigger: TCCAGCAGCTTTGTGACACCACTTCTCTACCGCTAC...CAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACTGCTGCACCCCCATGTaGTCCGGGGAGCAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNCCTPM*SGEQCR
Trigger: CCGGCACTGCTCCCCGGACCACATGGGGGTGCAGCA...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAAGGCTTTTGCGGATGTaGACCTTGAGCTGCGTGTTT +
Preference number: 4 (lower is better)
Translates to: VVTAAHPAGLASTRRPLARLLRM*TLSCVF
Trigger: AAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCT...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR CAA 72 bp AGGCTGAAGGCGAGGAGGCTTTTGCGGATGTGGACCTaGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: RLKARRLLRMWT*SCVFGRRTGLG
Trigger: CCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTGCCTGCGCGTGCGTGTaGGGGCCCCAGGATGCAAGC +
Preference number: 4 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCACACV*GPQDAS
Trigger: GCTTGCATCCTGGGGCCCTCACACGCACGCGCAGGC...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS-3UTR TCA 90 bp CCTGTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCGCGTCACTGCTATTaGATAGCTCCATTTAACACC +
Preference number: 4 (lower is better)
Translates to: PVVTAAHPAGLASTRRPLARHCY*IAPFNT
Trigger: GGTGTTAAATGGAGCTATTCAATAGCAGTGACGCGC...CAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGGGGACATTTGGTGGCTaGGGAGAGCGCGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: LELRVWETHRPRGDSSQMGTFGG*GERVTA
Trigger: AGCAGTGACGCGCTCTCCTCAGCCACCAAATGTCCC...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACGGACCTGCGCGCTGCTaGGCTTCTCTGCAAACCCGC +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNGPARC*ASLQTR
Trigger: GCGGGTTTGCAGAGAAGCGCAGCAGCGCGCAGGTCC...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS-3UTR GCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACGCCCAAGCCTCTTGGTaGTGTGGGCCCTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNAQASW*CGPWPL
Trigger: CAGTGGCCAGGGCCCACAGCACCAAGAGGCTTGGGC...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS-3UTR GCA 90 bp ACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGAGGCGTCGGCAGCTTCTaGGTTCTGCATCTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: TLSCVFGRRTGLGETQARGVGSF*VLHLGA
Trigger: TGCGCCAAGATGCAGAACGCAGAAGCTGCCGACGCC...TCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGGTAGAGGGTGGCCAGTaGTGGCACCACGTAGCCGAT +
Preference number: 4 (lower is better)
Translates to: LELRVWETHRPRGDSSQMVEGGQ*WHHVAD
Trigger: ATCGGCTACGTGGTGCCAGCACTGGCCACCCTCTAC...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCCCCAGAGAGCCCAAACTGCGTaGACACGGTGGCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GASRVTKCSASTRVTSPQRAQTA*TRWPPA
Trigger: TGCTGGTGGCCACCGTGTGCACGCAGTTTGGGCTCT...CTGGGGAGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGAGAGCCCAAACTGCGTaGACACGGTGGCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: AFADVDLELRVWETHRPRRAQTA*TRWPPA
Trigger: TGCTGGTGGCCACCGTGTGCACGCAGTTTGGGCTCT...CCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTGCCTACGCCAGCACCTaGTGCACCCCCATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: MWGASRVTKCSASTRVTSAYAST*CTPMWS
Trigger: GGACCACATGGGGGTGCAGCAGGTGCTGGCGTAGGC...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACGAACCCTGTGGTGACTaGGGCACACCCGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNEPCGD*GTPGRP
Trigger: AGGCCTGCCGGGTGTGCCGCAGTCACCACAGGGTTC...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACATCTGCAGTGCCACGTaGACTTCGCCGCCCACACTC +
Preference number: 4 (lower is better)
Translates to: GEEAFADVDLELRVWETHICSAT*TSPPTL
Trigger: GAGTGTGGGCGGCGAAGTCCACGTGGCACTGCAGAT...GTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGACTGCGTGCACACGGTaGCCACCAGCAGCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TPPASLPAARLLLEGCGETACTR*PPAACV
Trigger: CACACAGGCTGCTGGTGGCCACCGTGTGCACGCAGT...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTTCTCCCCAGGAGGGCTaGGCCGCCTACGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCSPQEG*AAYAST
Trigger: GGTGCTGGCGTAGGCGGCCCAGCCCTCCTGGGGAGA...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp GACAAACTGAATGCTGAGGAGGCTGAAGGCGAGGAGGCTTTTGCGGATGTGGACGCACCACGTAGCCGATaGACACCAGCGTGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: DKLNAEEAEGEEAFADVDAPRSR*TPAWRR
Trigger: CCGACGCCACGCTGGTGTTCATCGGCTACGTGGTGC...GTCCACATCCGCAAAAGCCTCCTCGCCTTCAGCCTCCTCAGCATTCAGTTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTGAAGGGGATCTGCAGTaGCACGTGGACTTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: MWGASRVTKCSASTRVTSEGDLQ*HVDFAA
Trigger: GGCGGCGAAGTCCACGTGGCACTGCAGATCCCCTTC...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTGTAGCACAGGCCCACTaGCACGCCCACCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCVAQAH*HAHHQA
Trigger: GGCCTGGTGGTGGGCGTGCCAGTGGGCCTGTGCTAC...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGCCGGCATGGTCATGCTaGCCTTGCTGTGTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: AFADVDLELRVWETHRPRPAWSC*PCCVGW
Trigger: CCAACCTACACAGCAAGGCCAGCATGACCATGCCGG...CCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGAGGGCGGTGGAGTACATaGCCACCAGTGAGGACACAT +
Preference number: 4 (lower is better)
Translates to: TLSCVFGRRTGLGETQARGRWST*PPVRTH
Trigger: ATGTGTCCTCACTGGTGGCCATGTACTCCACCGCCC...TCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTGCAGCGAGGAGAAGCTaGTCAGCAGCGCGCCACCCC +
Preference number: 4 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCAARRS*SAARHP
Trigger: GGGGTGGCGCGCTGCTGACCAGCTTCTCCTCGCTGC...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGACTCTAGCGCGCGGGTaGACACATGGCTGCAGATGT +
Preference number: 4 (lower is better)
Translates to: LELRVWETHRPRGDSSQMTLARG*THGCRC
Trigger: ACATCTGCAGCCATGTGTCCACCCGCGCGCTAGAGT...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCCCCAGACTCTAGCGCGCGGGTaGACACATGGCTGCAGATGT +
Preference number: 4 (lower is better)
Translates to: GASRVTKCSASTRVTSPQTLARG*THGCRC
Trigger: ACATCTGCAGCCATGTGTCCACCCGCGCGCTAGAGT...CTGGGGAGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACCAGCTCGTCTCCTTCTaGAAGGATGTGGGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: GEEAFADVDLELRVWETHQLVSF*KDVGSV
Trigger: GACGCTCCCCACATCCTTCCAGAAGGAGACGAGCTG...GTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGCTTGAGCTGCGTGTTTaGGAGACGCACAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TPPASLPAARLLLEGCGELELRV*ETHRPR
Trigger: CCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGGTCAGGGACATTTGGTaGCTGAGGAGAGCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: LELRVWETHRPRGDSSQMVRDIW*LRRARH
Trigger: GTGACGCGCTCTCCTCAGCCACCAAATGTCCCTGAC...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp GCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGCCAGTGAGGACACATTaGAGGGGATCTGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: AFADVDLELRVWETHRPRPVRTH*RGSAVP
Trigger: TGGCACTGCAGATCCCCTTCAATGTGTCCTCACTGG...CCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTCTCAGAACCCTGTGGTaGCTGCGGCACACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCLRTLW*LRHTRQ
Trigger: CTGCCGGGTGTGCCGCAGTCACCACAGGGTTCTGAG...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACGGGACATTTGGTGGCTaGGGAGAGCGCGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNGTFGG*GERVTA
Trigger: AGCAGTGACGCGCTCTCCTCAGCCACCAAATGTCCC...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCCCCAGGCTGCTGCGCTTCTCTaGAAACCCGCAGGCTCTTAT +
Preference number: 4 (lower is better)
Translates to: GASRVTKCSASTRVTSPQAAALL*KPAGSY
Trigger: ATAAGAGCCTGCGGGTTTGCAGAGAAGCGCAGCAGC...CTGGGGAGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS-3UTR GCA 90 bp GGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACGCTGAGCACCAGGCCTaGCACTGCCATGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: GEEAFADVDLELRVWETHAEHQA*HCHVDK
Trigger: TTTGTCAACATGGCAGTGGCAGGCCTGGTGCTCAGC...GTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp TTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACATTGAAGGGGATCTaGAGTGCCACGTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: LRMWTLSCVFGRRTGLGETLKGI*SATWTS
Trigger: CGAAGTCCACGTGGCACTGCAGATCCCCTTCAATGT...CTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTGTAGGTCCGCGGCAGTaGACGCTCGATGTAGTGGTC +
Preference number: 4 (lower is better)
Translates to: MWGASRVTKCSASTRVTSVGPRQ*TLDVVV
Trigger: GACCACTACATCGAGCGTGCACTGCCGCGGACCTAC...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTGGCGTCGGCAGCTTCTaGGTTCTGCATCTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: MWGASRVTKCSASTRVTSGVGSF*VLHLGA
Trigger: TGCGCCAAGATGCAGAACGCAGAAGCTGCCGACGCC...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACGTAGAGGGTGGCCAGTaGTGGCACCACGTAGCCGAT +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNVEGGQ*WHHVAD
Trigger: ATCGGCTACGTGGTGCCAGCACTGGCCACCCTCTAC...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp TTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGATGTGGACCTTGAGCTaGGTGTTTGGGAGACGCACA +
Preference number: 4 (lower is better)
Translates to: LRMWTLSCVFGRRTGLGEMWTLS*VFGRRT
Trigger: TGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACAT...CTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGAAGTACACGTCCGGCATaGTCATGCTGGCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TLSCVFGRRTGLGETQARSTRPA*SCWPCC
Trigger: ACAGCAAGGCCAGCATGACCATGCCGGACGTGTACT...TCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGGGGCGGTGGAGTACATaGCCACCAGTGAGGACACAT +
Preference number: 4 (lower is better)
Translates to: TPPASLPAARLLLEGCGEGRWST*PPVRTH
Trigger: ATGTGTCCTCACTGGTGGCCATGTACTCCACCGCCC...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTGCGTGTTGTACACGCTaGCCATGTAGGTCCGCGGCA +
Preference number: 4 (lower is better)
Translates to: MWGASRVTKCSASTRVTSACCTR*PCRSAA
Trigger: TGCCGCGGACCTACATGGCCAGCGTGTACAACACGC...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAAGAAGGCCAGGAGTTTaGAGAAATCCTTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: VVTAAHPAGLASTRRPLARRPGV*RNPSQS
Trigger: ACTTTGTGAAGGATTTCTCCAAACTCCTGGCCTTCT...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCCCCAGCCTTCTGGAAGGATGTaGGGAGCGTCCAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: GASRVTKCSASTRVTSPQPSGRM*GASRVT
Trigger: AGTTACCCTGGACGCTCCCCACATCCTTCCAGAAGG...CTGGGGAGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp AAGGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCGGTGTCAGGGACATTTaGTGGCTGAGGAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: KARRLLRMWTLSCVFGRRGVRDI*WLRRAR
Trigger: ACGCGCTCTCCTCAGCCACCAAATGTCCCTGACACC...GCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp ACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGACACCAGGCCTGCCACTaGCATGTTGACAAAGTACAC +
Preference number: 4 (lower is better)
Translates to: TLSCVFGRRTGLGETQARHQACH*HVDKVH
Trigger: GTGTACTTTGTCAACATGGCAGTGGCAGGCCTGGTG...TCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACCACCAGGCCTGCCACTaGCATGTTGACAAAGTACAC +
Preference number: 4 (lower is better)
Translates to: GEEAFADVDLELRVWETHHQACH*HVDKVH
Trigger: GTGTACTTTGTCAACATGGCAGTGGCAGGCCTGGTG...GTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCCCCAGACATTGAAGGGGATCTaGAGTGCCACGTGGACTTCG +
Preference number: 4 (lower is better)
Translates to: GASRVTKCSASTRVTSPQTLKGI*SATWTS
Trigger: CGAAGTCCACGTGGCACTGCAGATCCCCTTCAATGT...CTGGGGAGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GACAAACTGAATGCTGAGGAGGCTGAAGGCGAGGAGGCTTTTGCGGATGTGGACACGAAGCCGCACACGTaGCGCGTGTTGTACACGCTG +
Preference number: 4 (lower is better)
Translates to: DKLNAEEAEGEEAFADVDTKPHT*RVLYTL
Trigger: CAGCGTGTACAACACGCGGCACGTGTGCGGCTTCGT...GTCCACATCCGCAAAAGCCTCCTCGCCTTCAGCCTCCTCAGCATTCAGTTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGAAAAACACCCCTCCTaGTTCTCTTCCAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: AFADVDLELRVWETHRPREKHPS*FSSSSS
Trigger: CGAGCTGCTGGAAGAGAAGCAGGAGGGGTGTTTTTC...CCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GACAAACTGAATGCTGAGGAGGCTGAAGGCGAGGAGGCTTTTGCGGATGTGGACGAGACTCAAGCCAGATaGCAGCCACGGGGACCACAG +
Preference number: 4 (lower is better)
Translates to: DKLNAEEAEGEEAFADVDETQAR*QPRGPQ
Trigger: CTGTGGTCCCCGTGGCTGGCATCTGGCTTGAGTCTC...GTCCACATCCGCAAAAGCCTCCTCGCCTTCAGCCTCCTCAGCATTCAGTTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACGGCCACCCTGGCTGTTaGCATTCTTTCGTAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GEEAFADVDLELRVWETHGHPGC*HSFVGF
Trigger: AAACCCTACGAAAGAATGGCAACAGCCAGGGTGGCC...GTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCCCCAGGGCCACCCTGGCTGTTaGCATTCTTTCGTAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GASRVTKCSASTRVTSPQGHPGC*HSFVGF
Trigger: AAACCCTACGAAAGAATGGCAACAGCCAGGGTGGCC...CTGGGGAGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp TTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGTTTTTCATCAGCCGTTaGAGCTTGCTGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LRMWTLSCVFGRRTGLGEFFISR*SLLGKL
Trigger: GAGCTTCCCCAGCAAGCTCCAACGGCTGATGAAAAA...CTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACGTCAGGGACATTTGGTaGCTGAGGAGAGCGCGTCAC +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNVRDIW*LRRARH
Trigger: GTGACGCGCTCTCCTCAGCCACCAAATGTCCCTGAC...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCTGCCACTGCCATGTTaGCAAAGTACACGTCCGGCA +
Preference number: 4 (lower is better)
Translates to: MWGASRVTKCSASTRVTSLPLPC*QSTRPA
Trigger: TGCCGGACGTGTACTTTGTCAACATGGCAGTGGCAG...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp GACAAACTGAATGCTGAGGAGGCTGAAGGCGAGGAGGCTTTTGCGGATGTGGACTGCGGATGTGGACCTTaGGCTGCGTGTTTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: DKLNAEEAEGEEAFADVDCGCGP*AACLGD
Trigger: GTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCA...GTCCACATCCGCAAAAGCCTCCTCGCCTTCAGCCTCCTCAGCATTCAGTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTTGGTCATGCTGGCCTTaGTGTGTAGGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: MWGASRVTKCSASTRVTSWSCWP*CVGWPA
Trigger: TGCTGGCCAACCTACACAGCAAGGCCAGCATGACCA...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTGAGGGTGGCCAGTGCTaGCACCACGTAGCCGATGAA +
Preference number: 4 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCEGGQC*HHVADE
Trigger: TTCATCGGCTACGTGGTGCCAGCACTGGCCACCCTC...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTGCCGTTGGAGCTTGCTaGGGAAGCTCTGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: MWGASRVTKCSASTRVTSAVGAC*GSSGSC
Trigger: ACATGAACCAGAGCTTCCCCAGCAAGCTCCAACGGC...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACCCTTCTGGAAGGATGTaGGGAGCGTCCAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNPSGRM*GASRVT
Trigger: AGTTACCCTGGACGCTCCCCACATCCTTCCAGAAGG...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
3UTR CAA 72 bp GACTCAAGCCAGATGCCAGCCACGGGGACCACAGCCTaGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: DSSQMPATGTTA*AQEWHLWEKGN
Trigger: GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGCTGGCATCTGGCTTGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACGTACATGGCCACCAGTaGGGACACATTGAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNVHGHQ*GHIEGD
Trigger: ATCCCCTTCAATGTGTCCTCACTGGTGGCCATGTAC...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGTCTCAGGCACTTCTGTaGAATGTTCTCAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: LELRVWETHRPRGDSSQMSQALL*NVLRTL
Trigger: CAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGA...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACGTGGTGTCACAAAGCTaGTGGAGAAGGCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNVVSQS*WRRPGV
Trigger: AACTCCTGGCCTTCTCCAGCAGCTTTGTGACACCAC...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GACAAACTGAATGCTGAGGAGGCTGAAGGCGAGGAGGCTTTTGCGGATGTGGACTCAGCCGTTGGAGCTTaGTGGGGAAGCTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: DKLNAEEAEGEEAFADVDSAVGA*WGSSGS
Trigger: TGAACCAGAGCTTCCCCAGCAAGCTCCAACGGCTGA...GTCCACATCCGCAAAAGCCTCCTCGCCTTCAGCCTCCTCAGCATTCAGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACATGTGGACCTTGAGCTaGGTGTTTGGGAGACGCACA +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNMWTLS*VFGRRT
Trigger: TGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACAT...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCGACCCTTTACTTTGTaGCCCAAGCCTCTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: MWGASRVTKCSASTRVTSRPFTL*PKPLGA
Trigger: AGCACCAAGAGGCTTGGGCCACAAAGTAAAGGGTCG...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS-3UTR CCA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTCCGGCATGGTCATGCTaGCCTTGCTGTGTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCPAWSC*PCCVGW
Trigger: CCAACCTACACAGCAAGGCCAGCATGACCATGCCGG...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp GACAAACTGAATGCTGAGGAGGCTGAAGGCGAGGAGGCTTTTGCGGATGTGGACAGTACACGTCCGGCATaGTCATGCTGGCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: DKLNAEEAEGEEAFADVDSTRPA*SCWPCC
Trigger: ACAGCAAGGCCAGCATGACCATGCCGGACGTGTACT...GTCCACATCCGCAAAAGCCTCCTCGCCTTCAGCCTCCTCAGCATTCAGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp AAGGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCGTAGCGGTAGAGAAGTaGTGTCACAAAGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KARRLLRMWTLSCVFGRRVAVEK*CHKAAG
Trigger: TCCAGCAGCTTTGTGACACCACTTCTCTACCGCTAC...GCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGTTTTTCATCAGCCGTTaGAGCTTGCTGGGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: TPPASLPAARLLLEGCGEFFISR*SLLGKL
Trigger: GAGCTTCCCCAGCAAGCTCCAACGGCTGATGAAAAA...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp AAGGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCAGGCTTTTGCGGATGTaGACCTTGAGCTGCGTGTTT +
Preference number: 4 (lower is better)
Translates to: KARRLLRMWTLSCVFGRRRLLRM*TLSCVF
Trigger: AAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCT...GCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTGGTGACAGGGCCCGGCCACCCTaGCTGTTGCCATTCTTTCGT +
Preference number: 4 (lower is better)
Translates to: MSPRLRHFCEMFSEPCGDRARPP*LLPFFR
Trigger: ACGAAAGAATGGCAACAGCCAGGGTGGCCGGGCCCT...GTCACCACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTGGTGTCAGGGACATTTaGTGGCTGAGGAGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCGVRDI*WLRRAR
Trigger: ACGCGCTCTCCTCAGCCACCAAATGTCCCTGACACC...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTCTGCCACTGCCATGTTaGCAAAGTACACGTCCGGCA +
Preference number: 4 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCLPLPC*QSTRPA
Trigger: TGCCGGACGTGTACTTTGTCAACATGGCAGTGGCAG...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTCCAGTGAGGACACATTaGAGGGGATCTGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCPVRTH*RGSAVP
Trigger: TGGCACTGCAGATCCCCTTCAATGTGTCCTCACTGG...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGTCTCAGGCACTTCTGTaGAATGTTCTCAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: TPPASLPAARLLLEGCGESQALL*NVLRTL
Trigger: CAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGA...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp GACAAACTGAATGCTGAGGAGGCTGAAGGCGAGGAGGCTTTTGCGGATGTGGACGTGGTGTCACAAAGCTaGTGGAGAAGGCCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: DKLNAEEAEGEEAFADVDVVSQS*WRRPGV
Trigger: AACTCCTGGCCTTCTCCAGCAGCTTTGTGACACCAC...GTCCACATCCGCAAAAGCCTCCTCGCCTTCAGCCTCCTCAGCATTCAGTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTGCCTTGGCCCAAGAGTaGCATTTGTGGGAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: MWGASRVTKCSASTRVTSALAQE*HLWEKG
Trigger: TCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGC...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp GCCACGGGGACCACAGCCTTGGCCCAAGAGTGGCATTTGTGGGAAAAAGGAAACGCGCGTCACTGCTATTaGATAGCTCCATTTAACACC +
Preference number: 4 (lower is better)
Translates to: ATGTTALAQEWHLWEKGNARHCY*IAPFNT
Trigger: GGTGTTAAATGGAGCTATTCAATAGCAGTGACGCGC...GTTTCCTTTTTCCCACAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR GCA 90 bp CCAGCCATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTTCCAGGGTAACTAAGTaGTCTGCGTCCACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PAMSPRLRHFCEMFSEPCSRVTK*SASTRV
Trigger: GACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGA...ACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACATGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTGGTGACCAGGATCAGATAGTGTaGCGTCCAGAGCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: MSPRLRHFCEMFSEPCGDQDQIV*RPEPKL
Trigger: CAGTTTGGGCTCTGGACGCCACACTATCTGATCCTG...GTCACCACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp AAGGCGAGGAGGCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCCACACTTTGAGGAATTaGTTTAGGACAGGTTCATAC +
Preference number: 4 (lower is better)
Translates to: KARRLLRMWTLSCVFGRRHTLRN*FRTGSY
Trigger: GTATGAACCTGTCCTAAATCAATTCCTCAAAGTGTG...GCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR TCA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGCACACTTTGAGGAATTaGTTTAGGACAGGTTCATAC +
Preference number: 4 (lower is better)
Translates to: TPPASLPAARLLLEGCGEHTLRN*FRTGSY
Trigger: GTATGAACCTGTCCTAAATCAATTCCTCAAAGTGTG...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CCA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTAGAAGGCCAGGAGTTTaGAGAAATCCTTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: MWGASRVTKCSASTRVTSRRPGV*RNPSQS
Trigger: ACTTTGTGAAGGATTTCTCCAAACTCCTGGCCTTCT...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS GCA 90 bp AGGGCTCCAGCCGGCCCGTGTCCCGGTCCAGGGGCGTGTCCTCCCTaGGGACGCGGGAGAGTAGCACCAGCGCGTAGAGGGTGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: RAPAGPCPGPGACPP*GRGRVAPARRGWPV
Trigger: CACTGGCCACCCTCTACGCGCTGGTGCTACTCTCCCGCGTCCGCAGGGAGGACACGCCCCTGGACCGGGACACGGGCCGGCTGGAGCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS TCA 90 bp GCAGGTCCTGGCAGGCAGGCAGCTCCTCCACCAGCCCTGTGCCGTTaGACCAGCTGCAGCTCCACATGGCGGCCGGCGAGGCTCCGCGAC +
Preference number: 5 (lower is better)
Translates to: AGPGRQAAPPPALCR*TSCSSTWRPARLRD
Trigger: GTCGCGGAGCCTCGCCGGCCGCCATGTGGAGCTGCAGCTGGTTCAACGGCACAGGGCTGGTGGAGGAGCTGCCTGCCTGCCAGGACCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397095.2
ENST00000427680.1
ENST00000444847.2
CDS GCA 90 bp GGGTCAGGTGGTGACAGGCATGCAGAGCTAGGCCGCTGCTGGGTGTaGCCAGCCACAGTGCCGCCACAGCGCTGCCACAGCACCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GSGGDRHAELGRCWV*PATVPPQRCHSTPR
Trigger: CCTGGGGGTGCTGTGGCAGCGCTGTGGCGGCACTGTGGCTGGGCACACCCAGCAGCGGCCTAGCTCTGCATGCCTGTCACCACCTGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS GCA 90 bp GGCCACCAGAGCTCTGGTGAGGACCTGCGCGCTGCTGCGCTTCTCTaGAAACCCGCAGGCTCTTATCAGCAGCGCGCCTGGCCGCCTGCG +
Preference number: 5 (lower is better)
Translates to: GHQSSGEDLRAAALL*KPAGSYQQRAWPPA
Trigger: CGCAGGCGGCCAGGCGCGCTGCTGATAAGAGCCTGCGGGTTTGCAGAGAAGCGCAGCAGCGCGCAGGTCCTCACCAGAGCTCTGGTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000474396.1
CDS CCA 90 bp GGCCGGCGAGGCTCCGCGACCCTTTACTTTGTGGCCCAAGCCTCTTaGTGCTGTGGGCCCTGGCCACTGTCGGTGAGCAGCATGGCGGGA +
Preference number: 5 (lower is better)
Translates to: GRRGSATLYFVAQAS*CCGPWPLSVSSMAG
Trigger: TCCCGCCATGCTGCTCACCGACAGTGGCCAGGGCCCACAGCACCAAGAGGCTTGGGCCACAAAGTAAAGGGTCGCGGAGCCTCGCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS CCA 90 bp ACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTCCCCAGGAGGGCTaGGCCGCCTACGCCAGCACCTGCTGCACCCCCATGTGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: TKCSASTRVTSPQEG*AAYASTCCTPMWSG
Trigger: CCCGGACCACATGGGGGTGCAGCAGGTGCTGGCGTAGGCGGCCCAGCCCTCCTGGGGAGACGTGACTCTGGTGGACGCAGAGCACTTAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAACCAGCCCTGTGCCGTaGAACCAGCTGCAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: VVTAAHPAGLASTRRPLATSPVP*NQLQLH
Trigger: GTGGAGCTGCAGCTGGTTCAACGGCACAGGGCTGGT...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp CCTGTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGTCTGCGTTCTGCATCTaGGCGCACTCTAGCGCGCGG +
Preference number: 5 (lower is better)
Translates to: PVVTAAHPAGLASTRRPLSAFCI*AHSSAR
Trigger: CCGCGCGCTAGAGTGCGCCAAGATGCAGAACGCAGA...CAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCACAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCATCTGCGTTCTGCATCTaGGCGCACTCTAGCGCGCGG +
Preference number: 5 (lower is better)
Translates to: VVTAAHPAGLASTRRPLASAFCI*AHSSAR
Trigger: CCGCGCGCTAGAGTGCGCCAAGATGCAGAACGCAGA...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS TCA 90 bp TCGGTGAGCAGCATGGCGGGACAGAGGTGGCCACCAGAGCTCTGGTaGGGACCTGCGCGCTGCTGCGCTTCTCTGCAAACCCGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SVSSMAGQRWPPELW*GPARCCASLQTRRL
Trigger: GAGCCTGCGGGTTTGCAGAGAAGCGCAGCAGCGCGCAGGTCCTCACCAGAGCTCTGGTGGCCACCTCTGTCCCGCCATGCTGCTCACCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000474396.1
CDS GCA 90 bp CGGCGAGGCTCCGCGACCCTTTACTTTGTGGCCCAAGCCTCTTGGTaGTGTGGGCCCTGGCCACTGTCGGTGAGCAGCATGGCGGGACAG +
Preference number: 5 (lower is better)
Translates to: RRGSATLYFVAQASW*CGPWPLSVSSMAGQ
Trigger: CTGTCCCGCCATGCTGCTCACCGACAGTGGCCAGGGCCCACAGCACCAAGAGGCTTGGGCCACAAAGTAAAGGGTCGCGGAGCCTCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS GCA 90 bp GCCCCAGCAGGATCAGATAGTGTGGCGTCCAGAGCCCAAACTGCGTaGACACGGTGGCCACCAGCAGCCTGTGTGCCGAGGGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: APAGSDSVASRAQTA*TRWPPAACVPRAPA
Trigger: GGCTGGAGCCCTCGGCACACAGGCTGCTGGTGGCCACCGTGTGCACGCAGTTTGGGCTCTGGACGCCACACTATCTGATCCTGCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp GGATCAGATAGTGTGGCGTCCAGAGCCCAAACTGCGTGCACACGGTaGCCACCAGCAGCCTGTGTGCCGAGGGCTCCAGCCGGCCCGTGT +
Preference number: 5 (lower is better)
Translates to: GSDSVASRAQTACTR*PPAACVPRAPAGPC
Trigger: ACACGGGCCGGCTGGAGCCCTCGGCACACAGGCTGCTGGTGGCCACCGTGTGCACGCAGTTTGGGCTCTGGACGCCACACTATCTGATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp CTCGGCCAGGCAGGCAGCAATCTGGGGGATGTTGGTAGTGGGGGATaGGCTCTGGGCTCCACTCGCCGGGCCAGCACAAGCTCCAGACAG +
Preference number: 5 (lower is better)
Translates to: LGQAGSNLGDVGSGG*ALGSTRRASTSSRQ
Trigger: CTGTCTGGAGCTTGTGCTGGCCCGGCGAGTGGAGCCCAGAGCCCATCCCCCACTACCAACATCCCCCAGATTGCTGCCTGCCTGGCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS-3UTR CAA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAACGGGGACCACAGCCTaGGCCCAAGAGTGGCATTTG +
Preference number: 5 (lower is better)
Translates to: VVTAAHPAGLASTRRPLATGTTA*AQEWHL
Trigger: CAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGT...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS TCA 90 bp AATCCTGGTGAATGCCGCCCAGCAGCCGCAGTGAGGGTCAGGTGGTaGCAGGCATGCAGAGCTAGGCCGCTGCTGGGTGTGCCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: NPGECRPAAAVRVRW*QACRARPLLGVPSH
Trigger: GTGGCTGGGCACACCCAGCAGCGGCCTAGCTCTGCATGCCTGTCACCACCTGACCCTCACTGCGGCTGCTGGGCGGCATTCACCAGGATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS GCA 90 bp GGGGCCGAGCAGGTGCACAGGGGCCAGGGCGCTGAGCACCAGGCCTaGCACTGCCATGTTGACAAAGTACACGTCCGGCATGGTCATGCT +
Preference number: 5 (lower is better)
Translates to: GAEQVHRGQGAEHQA*HCHVDKVHVRHGHA
Trigger: AGCATGACCATGCCGGACGTGTACTTTGTCAACATGGCAGTGGCAGGCCTGGTGCTCAGCGCCCTGGCCCCTGTGCACCTGCTCGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp CGCCACCCCACACGAAGCCGCACACGTGCCGCGTGTTGTACACGCTaGCCATGTAGGTCCGCGGCAGTGCACGCTCGATGTAGTGGTCGA +
Preference number: 5 (lower is better)
Translates to: RHPTRSRTRAACCTR*PCRSAAVHARCSGR
Trigger: TCGACCACTACATCGAGCGTGCACTGCCGCGGACCTACATGGCCAGCGTGTACAACACGCGGCACGTGTGCGGCTTCGTGTGGGGTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp CACGGCCCTGTGGCTAGGCATGCAGGCAGCTGGCAGATGGGCGGGTaGGTAGATGTGGGAATTCCCATCCAGAGGCTGGTGGGCAGGACG +
Preference number: 5 (lower is better)
Translates to: HGPVARHAGSWQMGG*VDVGIPIQRLVGRT
Trigger: CGTCCTGCCCACCAGCCTCTGGATGGGAATTCCCACATCTACCCACCCGCCCATCTGCCAGCTGCCTGCATGCCTAGCCACAGGGCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS-3UTR CAA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAATCAGCCGTTGGAGCTaGCTGGGGAAGCTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: VVTAAHPAGLASTRRPLAISRWS*LGKLWF
Trigger: GAACCAGAGCTTCCCCAGCAAGCTCCAACGGCTGAT...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp ACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGACACACCCGGCAGGCCTaGCTAGCACACGCCGCCCAC +
Preference number: 5 (lower is better)
Translates to: TLSCVFGRRTGLGETQARHTRQA*LAHAAH
Trigger: GTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTG...TCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp GCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGCACACCCGGCAGGCCTaGCTAGCACACGCCGCCCAC +
Preference number: 5 (lower is better)
Translates to: AFADVDLELRVWETHRPRHTRQA*LAHAAH
Trigger: GTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTG...CCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS TCA 90 bp GCACCAGCGCGTAGAGGGTGGCCAGTGCTGGCACCACGTAGCCGATaGACACCAGCGTGGCGTCGGCAGCTTCTGCGTTCTGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: APARRGWPVLAPRSR*TPAWRRQLLRSASW
Trigger: CCAAGATGCAGAACGCAGAAGCTGCCGACGCCACGCTGGTGTTCATCGGCTACGTGGTGCCAGCACTGGCCACCCTCTACGCGCTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS GCA 90 bp CAGCATGGCGGGACAGAGGTGGCCACCAGAGCTCTGGTGAGGACCTaGGCGCTGCTGCGCTTCTCTGCAAACCCGCAGGCTCTTATCAGC +
Preference number: 5 (lower is better)
Translates to: QHGGTEVATRALVRT*ALLRFSANPQALIS
Trigger: GCTGATAAGAGCCTGCGGGTTTGCAGAGAAGCGCAGCAGCGCGCAGGTCCTCACCAGAGCTCTGGTGGCCACCTCTGTCCCGCCATGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000474396.1
CDS GCA 90 bp CACGTGCCGCGTGTTGTACACGCTGGCCATGTAGGTCCGCGGCAGTaGACGCTCGATGTAGTGGTCGAGGCTCAGCAGGGCGGTGGAGTA +
Preference number: 5 (lower is better)
Translates to: HVPRVVHAGHVGPRQ*TLDVVVEAQQGGGV
Trigger: TACTCCACCGCCCTGCTGAGCCTCGACCACTACATCGAGCGTGCACTGCCGCGGACCTACATGGCCAGCGTGTACAACACGCGGCACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp GCGACCCTTTACTTTGTGGCCCAAGCCTCTTGGTGCTGTGGGCCCTaGCCACTGTCGGTGAGCAGCATGGCGGGACAGAGGTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: ATLYFVAQASWCCGP*PLSVSSMAGQRWPP
Trigger: TGGTGGCCACCTCTGTCCCGCCATGCTGCTCACCGACAGTGGCCAGGGCCCACAGCACCAAGAGGCTTGGGCCACAAAGTAAAGGGTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS CCA 90 bp AGGCAGGCAGCAATCTGGGGGATGTTGGTAGTGGGGGATGGGCTCTaGGCTCCACTCGCCGGGCCAGCACAAGCTCCAGACAGGATGCAC +
Preference number: 5 (lower is better)
Translates to: RQAAIWGMLVVGDGL*APLAGPAQAPDRMH
Trigger: GTGCATCCTGTCTGGAGCTTGTGCTGGCCCGGCGAGTGGAGCCCAGAGCCCATCCCCCACTACCAACATCCCCCAGATTGCTGCCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS-3UTR CAA 90 bp GTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCAGGGCTTTTTCATCAGCCGTaGGAGCTTGCTGGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: VTAAHPAGLASTRRPLAGLFHQP*ELAGEA
Trigger: AGCTTCCCCAGCAAGCTCCAACGGCTGATGAAAAAG...CCCTGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp GTGGTGACTGCGGCACACCCGGCAGGCCTTGCTAGCACACGCCGCCCACTGGCATTGCGGATGTGGACCTaGAGCTGCGTGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: VVTAAHPAGLASTRRPLALRMWT*SCVFGR
Trigger: TCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAA...TGCCAGTGGGCGGCGTGTGCTAGCAAGGCCTGCCGGGTGTGCCGCAGTCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS TCA 90 bp GGCTCAGCAGGGCGGTGGAGTACATGGCCACCAGTGAGGACACATTaGAGGGGATCTGCAGTGCCACGTGGACTTCGCCGCCCACACTCC +
Preference number: 5 (lower is better)
Translates to: GSAGRWSTWPPVRTH*RGSAVPRGLRRPHS
Trigger: GGAGTGTGGGCGGCGAAGTCCACGTGGCACTGCAGATCCCCTTCAATGTGTCCTCACTGGTGGCCATGTACTCCACCGCCCTGCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS TCA 90 bp GTGGGTCATTGTGCAATCCTGGTGAATGCCGCCCAGCAGCCGCAGTaGGGGTCAGGTGGTGACAGGCATGCAGAGCTAGGCCGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VGHCAILVNAAQQPQ*GSGGDRHAELGRCW
Trigger: CCAGCAGCGGCCTAGCTCTGCATGCCTGTCACCACCTGACCCTCACTGCGGCTGCTGGGCGGCATTCACCAGGATTGCACAATGACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS GCA 90 bp GAGCAGGTGCACAGGGGCCAGGGCGCTGAGCACCAGGCCTGCCACTaGCATGTTGACAAAGTACACGTCCGGCATGGTCATGCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: EQVHRGQGAEHQACH*HVDKVHVRHGHAGL
Trigger: AAGGCCAGCATGACCATGCCGGACGTGTACTTTGTCAACATGGCAGTGGCAGGCCTGGTGCTCAGCGCCCTGGCCCCTGTGCACCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS GCA 90 bp GCGGTGGAGTACATGGCCACCAGTGAGGACACATTGAAGGGGATCTaGAGTGCCACGTGGACTTCGCCGCCCACACTCCACAGCGCCCAC +
Preference number: 5 (lower is better)
Translates to: AVEYMATSEDTLKGI*SATWTSPPTLHSAH
Trigger: GTGGGCGCTGTGGAGTGTGGGCGGCGAAGTCCACGTGGCACTGCAGATCCCCTTCAATGTGTCCTCACTGGTGGCCATGTACTCCACCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp CCCTCGCGAGATGATGACCGTGTGCCCCAGCAGGATCAGATAGTGTaGCGTCCAGAGCCCAAACTGCGTGCACACGGTGGCCACCAGCAG +
Preference number: 5 (lower is better)
Translates to: PSRDDDRVPQQDQIV*RPEPKLRAHGGHQQ
Trigger: CTGCTGGTGGCCACCGTGTGCACGCAGTTTGGGCTCTGGACGCCACACTATCTGATCCTGCTGGGGCACACGGTCATCATCTCGCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp TTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGGGGTGTCAGGGACATTaGGTGGCTGAGGAGAGCGCG +
Preference number: 5 (lower is better)
Translates to: LRMWTLSCVFGRRTGLGEGCQGH*VAEESA
Trigger: CGCGCTCTCCTCAGCCACCAAATGTCCCTGACACCC...CTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS GCA 90 bp GCTCCAGACAGGATGCACCTTTACTTTGTGGCCCAAGCCTCTTGGTaGTGTGGGCCCTGGCCACTGTCGGTGAGCAGCATGGCGGGACAG +
Preference number: 5 (lower is better)
Translates to: APDRMHLYFVAQASW*CGPWPLSVSSMAGQ
Trigger: CTGTCCCGCCATGCTGCTCACCGACAGTGGCCAGGGCCCACAGCACCAAGAGGCTTGGGCCACAAAGTAAAGGTGCATCCTGTCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS CCA 90 bp CAAAGTACACGTCCGGCATGGTCATGCTGGCCTTGCTGTGTAGGTTaGCCAGCACCAGCAGGGCGTTGTAGCACAGGCCCACTGGCACGC +
Preference number: 5 (lower is better)
Translates to: QSTRPAWSCWPCCVG*PAPAGRCSTGPLAR
Trigger: GCGTGCCAGTGGGCCTGTGCTACAACGCCCTGCTGGTGCTGGCCAACCTACACAGCAAGGCCAGCATGACCATGCCGGACGTGTACTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp ATGCACCTTTACTTTGTGGCCCAAGCCTCTTGGTGCTGTGGGCCCTaGCCACTGTCGGTGAGCAGCATGGCGGGACAGAGGTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: MHLYFVAQASWCCGP*PLSVSSMAGQRWPP
Trigger: TGGTGGCCACCTCTGTCCCGCCATGCTGCTCACCGACAGTGGCCAGGGCCCACAGCACCAAGAGGCTTGGGCCACAAAGTAAAGGTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS-3UTR CAA 90 bp ACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGAGGGTGTCAGGGACATTaGGTGGCTGAGGAGAGCGCG +
Preference number: 5 (lower is better)
Translates to: TLSCVFGRRTGLGETQARGCQGH*VAEESA
Trigger: CGCGCTCTCCTCAGCCACCAAATGTCCCTGACACCC...TCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS TCA 90 bp GTAGTGGTCGAGGCTCAGCAGGGCGGTGGAGTACATGGCCACCAGTaGGGACACATTGAAGGGGATCTGCAGTGCCACGTGGACTTCGCC +
Preference number: 5 (lower is better)
Translates to: VVVEAQQGGGVHGHQ*GHIEGDLQCHVDFA
Trigger: GGCGAAGTCCACGTGGCACTGCAGATCCCCTTCAATGTGTCCTCACTGGTGGCCATGTACTCCACCGCCCTGCTGAGCCTCGACCACTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp CGGCAGCTTCTGCGTTCTGCATCTTGGCGCACTCTAGCGCGCGGGTaGACACATGGCTGCAGATGTAGAAGAGCAGCGAGGAGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: RQLLRSASWRTLARG*THGCRCRRAARRSW
Trigger: CCAGCTTCTCCTCGCTGCTCTTCTACATCTGCAGCCATGTGTCCACCCGCGCGCTAGAGTGCGCCAAGATGCAGAACGCAGAAGCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp CAAGCTCCAGACAGGATGCACCTTTACTTTGTGGCCCAAGCCTCTTaGTGCTGTGGGCCCTGGCCACTGTCGGTGAGCAGCATGGCGGGA +
Preference number: 5 (lower is better)
Translates to: QAPDRMHLYFVAQAS*CCGPWPLSVSSMAG
Trigger: TCCCGCCATGCTGCTCACCGACAGTGGCCAGGGCCCACAGCACCAAGAGGCTTGGGCCACAAAGTAAAGGTGCATCCTGTCTGGAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS-3UTR CAA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGACCAGCCCTGTGCCGTaGAACCAGCTGCAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: TPPASLPAARLLLEGCGETSPVP*NQLQLH
Trigger: GTGGAGCTGCAGCTGGTTCAACGGCACAGGGCTGGT...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp CTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGATGCCGCGACCCTTTACTTaGTGGCCCAAGCCTCTTGGT +
Preference number: 5 (lower is better)
Translates to: LELRVWETHRPRGDSSQMPRPFT*WPKPLG
Trigger: ACCAAGAGGCTTGGGCCACAAAGTAAAGGGTCGCGG...CATCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS-3UTR CAA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGACGGGGACCACAGCCTaGGCCCAAGAGTGGCATTTG +
Preference number: 5 (lower is better)
Translates to: TPPASLPAARLLLEGCGETGTTA*AQEWHL
Trigger: CAAATGCCACTCTTGGGCCAAGGCTGTGGTCCCCGT...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp ACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGAAAGGCGAGGAGGCTTTaGCGGATGTGGACCTTGAGC +
Preference number: 5 (lower is better)
Translates to: TLSCVFGRRTGLGETQARKARRL*RMWTLS
Trigger: GCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTT...TCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp GCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGCGGCCACCCTGGCTGTaGCCATTCTTTCGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: AFADVDLELRVWETHRPRRPPWL*PFFRRV
Trigger: AACCCTACGAAAGAATGGCAACAGCCAGGGTGGCCG...CCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp TGTCCACCATGTCATTTGGCCCCGGCTGACCTCCTACTCTCGGAGTaGAGTAGAAAGCGTCTCAGGCAGACGAGCAGACGGCATCGTTCC +
Preference number: 5 (lower is better)
Translates to: CPPCHLAPADLLLSE*SRKRLRQTSRRHRS
Trigger: GGAACGATGCCGTCTGCTCGTCTGCCTGAGACGCTTTCTACTCCACTCCGAGAGTAGGAGGTCAGCCGGGGCCAAATGACATGGTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427680.1
CDS CCA 90 bp TCCGCGACCAGCTATCTCGGGAAGCCTGATGTCCACCATGTCATTTaGCCCCGGCTGACCTCCTACTCTCGGAGTGGAGTAGAAAGCGTC +
Preference number: 5 (lower is better)
Translates to: SATSYLGKPDVHHVI*PRLTSYSRSGVESV
Trigger: GACGCTTTCTACTCCACTCCGAGAGTAGGAGGTCAGCCGGGGCCAAATGACATGGTGGACATCAGGCTTCCCGAGATAGCTGGTCGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427680.1
CDS-3UTR CAA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGCCTGCCACTGCCATGTaGACAAAGTACACGTCCGGC +
Preference number: 5 (lower is better)
Translates to: TPPASLPAARLLLEGCGEPATAM*TKYTSG
Trigger: GCCGGACGTGTACTTTGTCAACATGGCAGTGGCAGG...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGAAGGCGAGGAGGCTTTaGCGGATGTGGACCTTGAGC +
Preference number: 5 (lower is better)
Translates to: TPPASLPAARLLLEGCGEKARRL*RMWTLS
Trigger: GCTCAAGGTCCACATCCGCAAAAGCCTCCTCGCCTT...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp GCCGGTCCCCGCAGGGCAGCTTTTTCATCAGCCGTTGGAGCTTGCTaGGGAAGCTCTGGTTCATGTAGCGGTAGAGAAGTGGTGTCACAA +
Preference number: 5 (lower is better)
Translates to: AGPRRAAFSSAVGAC*GSSGSCSGREVVSQ
Trigger: TTGTGACACCACTTCTCTACCGCTACATGAACCAGAGCTTCCCCAGCAAGCTCCAACGGCTGATGAAAAAGCTGCCCTGCGGGGACCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp ACCCCTCCTGCTTCTCTTCCAGCAGCTCGTCTCCTTCTGGAAGGATGTGGGGAGACCAGTGAGGACACATaGAAGGGGATCTGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: TPPASLPAARLLLEGCGETSEDT*KGICSA
Trigger: GGCACTGCAGATCCCCTTCAATGTGTCCTCACTGGT...CTCCCCACATCCTTCCAGAAGGAGACGAGCTGCTGGAAGAGAAGCAGGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTATCAGCCGTTGGAGCTaGCTGGGGAAGCTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: MWGASRVTKCSASTRVTSISRWS*LGKLWF
Trigger: GAACCAGAGCTTCCCCAGCAAGCTCCAACGGCTGAT...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp GCTTTTGCGGATGTGGACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGCTTTTTCATCAGCCGTaGGAGCTTGCTGGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: AFADVDLELRVWETHRPRLFHQP*ELAGEA
Trigger: AGCTTCCCCAGCAAGCTCCAACGGCTGATGAAAAAG...CCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTACCAGTGAGGACACATaGAAGGGGATCTGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: MWGASRVTKCSASTRVTSTSEDT*KGICSA
Trigger: GGCACTGCAGATCCCCTTCAATGTGTCCTCACTGGT...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp ATGTGGGGAGCGTCCAGGGTAACTAAGTGCTCTGCGTCCACCAGAGTCACGTCTTTGCGGATGTGGACCTaGAGCTGCGTGTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: MWGASRVTKCSASTRVTSLRMWT*SCVFGR
Trigger: TCTCCCAAACACGCAGCTCAAGGTCCACATCCGCAA...AGACGTGACTCTGGTGGACGCAGAGCACTTAGTTACCCTGGACGCTCCCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp ACCTTGAGCTGCGTGTTTGGGAGACGCACAGGCCTCGGGGAGACTCAAGCCAGAGAGAAGGCCAGGAGTTaGGAGAAATCCTTCACAAAG +
Preference number: 5 (lower is better)
Translates to: TLSCVFGRRTGLGETQAREKARS*EKSFTK
Trigger: CTTTGTGAAGGATTTCTCCAAACTCCTGGCCTTCTC...TCTGGCTTGAGTCTCCCCGAGGCCTGTGCGTCTCCCAAACACGCAGCTCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS TCA 90 bp GACAACAGGGGTTCTGGTTGGGGAGCCAGGCCTTACAGTAGTTCTTaGAGGAGCTGCACAGCAGGTCATGGGTACTGTGAGTGTGCACTT +
Preference number: 5 (lower is better)
Translates to: DNRGSGWGARPYSSS*RSCTAGHGYCECAL
Trigger: AAGTGCACACTCACAGTACCCATGACCTGCTGTGCAGCTCCTTCAAGAACTACTGTAAGGCCTGGCTCCCCAACCAGAACCCCTGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481403.1
CDS-3UTR CAA 90 bp ATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTGGTGACCCTGCCACTGCCATGTaGACAAAGTACACGTCCGGC +
Preference number: 5 (lower is better)
Translates to: MSPRLRHFCEMFSEPCGDPATAM*TKYTSG
Trigger: GCCGGACGTGTACTTTGTCAACATGGCAGTGGCAGG...GTCACCACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS-3UTR CAA 90 bp ATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTGGTGACCGGCCACCCTGGCTGTaGCCATTCTTTCGTAGGGTT +
Preference number: 5 (lower is better)
Translates to: MSPRLRHFCEMFSEPCGDRPPWL*PFFRRV
Trigger: AACCCTACGAAAGAATGGCAACAGCCAGGGTGGCCG...GTCACCACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp GGTAGAGAAGTGGTGTCACAAAGCTGCTGGAGAAGGCCAGGAGTTTaGAGAAATCCTTCACAAAGTGCAGTAGCCCCAGGTAGTGTGCGT +
Preference number: 5 (lower is better)
Translates to: GREVVSQSCWRRPGV*RNPSQSAVAPGSVR
Trigger: ACGCACACTACCTGGGGCTACTGCACTTTGTGAAGGATTTCTCCAAACTCCTGGCCTTCTCCAGCAGCTTTGTGACACCACTTCTCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp TTGGAGCTTGCTGGGGAAGCTCTGGTTCATGTAGCGGTAGAGAAGTaGTGTCACAAAGCTGCTGGAGAAGGCCAGGAGTTTGGAGAAATC +
Preference number: 5 (lower is better)
Translates to: LELAGEALVHVAVEK*CHKAAGEGQEFGEI
Trigger: GATTTCTCCAAACTCCTGGCCTTCTCCAGCAGCTTTGTGACACCACTTCTCTACCGCTACATGAACCAGAGCTTCCCCAGCAAGCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS GCA 90 bp GGAAGCTCTGGTTCATGTAGCGGTAGAGAAGTGGTGTCACAAAGCTaGTGGAGAAGGCCAGGAGTTTGGAGAAATCCTTCACAAAGTGCA +
Preference number: 5 (lower is better)
Translates to: GSSGSCSGREVVSQS*WRRPGVWRNPSQSA
Trigger: TGCACTTTGTGAAGGATTTCTCCAAACTCCTGGCCTTCTCCAGCAGCTTTGTGACACCACTTCTCTACCGCTACATGAACCAGAGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp GTCGTGCTGTTCCGTGTGGACAGGAGCTGGCTATTTAAAGTGGAATaGAGGACTCAAGTACATCTTCATGGGCAGGGAAGAGATCAAAGG +
Preference number: 5 (lower is better)
Translates to: VVLFRVDRSWLFKVE*RTQVHLHGQGRDQR
Trigger: CCTTTGATCTCTTCCCTGCCCATGAAGATGTACTTGAGTCCTCCATTCCACTTTAAATAGCCAGCTCCTGTCCACACGGAACAGCACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481403.1
CDS-3UTR CAA 90 bp ATGTCTCCGCGTCTCAGGCACTTCTGTGAAATGTTCTCAGAACCCTGTGGTGACGAGAAGGCCAGGAGTTaGGAGAAATCCTTCACAAAG +
Preference number: 5 (lower is better)
Translates to: MSPRLRHFCEMFSEPCGDEKARS*EKSFTK
Trigger: CTTTGTGAAGGATTTCTCCAAACTCCTGGCCTTCTC...GTCACCACAGGGTTCTGAGAACATTTCACAGAAGTGCCTGAGACGCGGAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 90 bp AAGATGTCGTGCTGTTCCGTGTGGACAGGAGCTGGCTATTTAAAGTaGAATGGAGGACTCAAGTACATCTTCATGGGCAGGGAAGAGATC +
Preference number: 5 (lower is better)
Translates to: KMSCCSVWTGAGYLK*NGGLKYIFMGREEI
Trigger: GATCTCTTCCCTGCCCATGAAGATGTACTTGAGTCCTCCATTCCACTTTAAATAGCCAGCTCCTGTCCACACGGAACAGCACGACATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481403.1
CDS CCA 90 bp CATTTTACTCATACAAGTTTGCAGAGGCCTTTAAAGCAAGCCTCTTaGCCCTCTGTTATTGAATGCTGGCCTCTGCTAGGTGCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: HFTHTSLQRPLKQAS*PSVIECWPLLGAAG
Trigger: ACCTGCAGCACCTAGCAGAGGCCAGCATTCAATAACAGAGGGCCAAGAGGCTTGCTTTAAAGGCCTCTGCAAACTTGTATGAGTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481403.1
CDS TCA 90 bp ATAAACTATGTTCTTAAGTCACTTGTCTTCAGAGGCCTTCTTCATTaGGGAAGACAACAGGGGTTCTGGTTGGGGAGCCAGGCCTTACAG +
Preference number: 5 (lower is better)
Translates to: INYVLKSLVFRGLLH*GRQQGFWLGSQALQ
Trigger: CTGTAAGGCCTGGCTCCCCAACCAGAACCCCTGTTGTCTTCCTCAATGAAGAAGGCCTCTGAAGACAAGTGACTTAAGAACATAGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481403.1
CDS GCA 72 bp ACATCTTCATGGGCAGGGAAGAGATCAAAGGCGGCTTaGTGGGCGGCGGCCGGCGCAGTCGCCGCCGGGCGG +
Preference number: 6 (lower is better)
Translates to: TSSWAGKRSKAA*WAAAGAVAAGR
Trigger: CCGCCCGGCGGCGACTGCGCCGGCCGCCGCCCAGCAAGCCGCCTTTGATCTCTTCCCTGCCCATGAAGATGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481403.1
CDS CAA 90 bp TGCAGGTCCTGGCAGGCAGGCAGCTCCTCCACCAGCCCTGTGCCGTaGAACCAGCTGCAGCTCCACATGGCGGCCGGCGAGGCTCCGCGA +
Preference number: 6 (lower is better)
Translates to: CRSWQAGSSSTSPVP*NQLQLHMAAGEAPR
Trigger: TCGCGGAGCCTCGCCGGCCGCCATGTGGAGCTGCAGCTGGTTCAACGGCACAGGGCTGGTGGAGGAGCTGCCTGCCTGCCAGGACCTGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397095.2
ENST00000427680.1
ENST00000444847.2
CDS CAA 90 bp CGGCCGGCGAGGCTCCGCGACCCTTTACTTTGTGGCCCAAGCCTCTaGGTGCTGTGGGCCCTGGCCACTGTCGGTGAGCAGCATGGCGGG +
Preference number: 6 (lower is better)
Translates to: RPARLRDPLLCGPSL*VLWALATVGEQHGG
Trigger: CCCGCCATGCTGCTCACCGACAGTGGCCAGGGCCCACAGCACCAAGAGGCTTGGGCCACAAAGTAAAGGGTCGCGGAGCCTCGCCGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS TCA 72 bp AGACGGCATCGTTCCCATGCCCGGAGGCAAGAGCAGTaGGGAGGCCGGCTGCGGGAGTGGGTCCTCACCCGC +
Preference number: 6 (lower is better)
Translates to: RRHRSHARRQEQ*GGRLREWVLTR
Trigger: GCGGGTGAGGACCCACTCCCGCAGCCGGCCTCCTCACTGCTCTTGCCTCCGGGCATGGGAACGATGCCGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427680.1
CDS GCA 72 bp GCGTCTCAGGCAGACGAGCAGACGGCATCGTTCCCATaGCCGGAGGCAAGAGCAGTGAGGAGGCCGGCTGCG +
Preference number: 6 (lower is better)
Translates to: ASQADEQTASFP*PEARAVRRPAA
Trigger: CGCAGCCGGCCTCCTCACTGCTCTTGCCTCCGGGCATGGGAACGATGCCGTCTGCTCGTCTGCCTGAGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427680.1
CDS CCA 72 bp AGTGTGGCGTCCAGAGCCCAAACTGCGTGCACACGGTaGCCACCAGCAGCCTGTGTGCCGAGGGCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: SVASRAQTACTR*PPAACVPRAPA
Trigger: GGCTGGAGCCCTCGGCACACAGGCTGCTGGTGGCCACCGTGTGCACGCAGTTTGGGCTCTGGACGCCACACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS TCA 72 bp GAATGCCGCCCAGCAGCCGCAGTGAGGGTCAGGTGGTaGCAGGCATGCAGAGCTAGGCCGCTGCTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: ECRPAAAVRVRW*QACRARPLLGV
Trigger: CACACCCAGCAGCGGCCTAGCTCTGCATGCCTGTCACCACCTGACCCTCACTGCGGCTGCTGGGCGGCATTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS GCA 72 bp GGGACAGAGGTGGCCACCAGAGCTCTGGTGAGGACCTaGGCGCTGCTGCGCTTCTCTGCAAACCCGCAGGCT +
Preference number: 6 (lower is better)
Translates to: GTEVATRALVRT*ALLRFSANPQA
Trigger: AGCCTGCGGGTTTGCAGAGAAGCGCAGCAGCGCGCAGGTCCTCACCAGAGCTCTGGTGGCCACCTCTGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000474396.1
CDS CCA 72 bp CCAGCGTGGCGTCGGCAGCTTCTGCGTTCTGCATCTTaGCGCACTCTAGCGCGCGGGTGGACACATGGCTGC +
Preference number: 6 (lower is better)
Translates to: PAWRRQLLRSAS*RTLARGWTHGC
Trigger: GCAGCCATGTGTCCACCCGCGCGCTAGAGTGCGCCAAGATGCAGAACGCAGAAGCTGCCGACGCCACGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS TCA 72 bp CCGGCGAGGCTCCGCGACCAGCTATCTCGGGAAGCCTaGTGTCCACCATGTCATTTGGCCCCGGCTGACCTC +
Preference number: 6 (lower is better)
Translates to: PARLRDQLSREA*CPPCHLAPADL
Trigger: GAGGTCAGCCGGGGCCAAATGACATGGTGGACATCAGGCTTCCCGAGATAGCTGGTCGCGGAGCCTCGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427680.1
CDS GCA 72 bp AGCTCTGGTGAGGACCTGCGCGCTGCTGCGCTTCTCTaGAAACCCGCAGGCTCTTATCAGCAGCGCGCCTGG +
Preference number: 6 (lower is better)
Translates to: SSGEDLRAAALL*KPAGSYQQRAW
Trigger: CCAGGCGCGCTGCTGATAAGAGCCTGCGGGTTTGCAGAGAAGCGCAGCAGCGCGCAGGTCCTCACCAGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000474396.1
CDS CCA 72 bp GGCTCCGCGACCCTTTACTTTGTGGCCCAAGCCTCTTaGTGCTGTGGGCCCTGGCCACTGTCGGTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: GSATLYFVAQAS*CCGPWPLSVSS
Trigger: GCTGCTCACCGACAGTGGCCAGGGCCCACAGCACCAAGAGGCTTGGGCCACAAAGTAAAGGGTCGCGGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397095.2
CDS CAA 72 bp ACCAGCGTGGCGTCGGCAGCTTCTGCGTTCTGCATCTaGGCGCACTCTAGCGCGCGGGTGGACACATGGCTG +
Preference number: 6 (lower is better)
Translates to: TSVASAASAFCI*AHSSARVDTWL
Trigger: CAGCCATGTGTCCACCCGCGCGCTAGAGTGCGCCAAGATGCAGAACGCAGAAGCTGCCGACGCCACGCTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CAA 72 bp CCAGAGGCTGGTGGGCAGGACGGGAGGTGTGGGTCATaGTGCAATCCTGGTGAATGCCGCCCAGCAGCCGCA +
Preference number: 6 (lower is better)
Translates to: PEAGGQDGRCGS*CNPGECRPAAA
Trigger: TGCGGCTGCTGGGCGGCATTCACCAGGATTGCACAATGACCCACACCTCCCGTCCTGCCCACCAGCCTCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS TCA 72 bp CGTAGAGGGTGGCCAGTGCTGGCACCACGTAGCCGATaGACACCAGCGTGGCGTCGGCAGCTTCTGCGTTCT +
Preference number: 6 (lower is better)
Translates to: RRGWPVLAPRSR*TPAWRRQLLRS
Trigger: AGAACGCAGAAGCTGCCGACGCCACGCTGGTGTTCATCGGCTACGTGGTGCCAGCACTGGCCACCCTCTACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS GCA 72 bp CGTGTTGTACACGCTGGCCATGTAGGTCCGCGGCAGTaGACGCTCGATGTAGTGGTCGAGGCTCAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: RVVHAGHVGPRQ*TLDVVVEAQQG
Trigger: GCCCTGCTGAGCCTCGACCACTACATCGAGCGTGCACTGCCGCGGACCTACATGGCCAGCGTGTACAACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS GCA 72 bp GGATCAGATAGTGTGGCGTCCAGAGCCCAAACTGCGTaGACACGGTGGCCACCAGCAGCCTGTGTGCCGAGG +
Preference number: 6 (lower is better)
Translates to: GSDSVASRAQTA*TRWPPAACVPR
Trigger: CCTCGGCACACAGGCTGCTGGTGGCCACCGTGTGCACGCAGTTTGGGCTCTGGACGCCACACTATCTGATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 72 bp TACTTTGTGGCCCAAGCCTCTTGGTGCTGTGGGCCCTaGCCACTGTCGGTGAGCAGCATGGCGGGACAGAGG +
Preference number: 6 (lower is better)
Translates to: YFVAQASWCCGP*PLSVSSMAGQR
Trigger: CCTCTGTCCCGCCATGCTGCTCACCGACAGTGGCCAGGGCCCACAGCACCAAGAGGCTTGGGCCACAAAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000474396.1
CDS CCA 72 bp CGTCCGGCATGGTCATGCTGGCCTTGCTGTGTAGGTTaGCCAGCACCAGCAGGGCGTTGTAGCACAGGCCCA +
Preference number: 6 (lower is better)
Translates to: RPAWSCWPCCVG*PAPAGRCSTGP
Trigger: TGGGCCTGTGCTACAACGCCCTGCTGGTGCTGGCCAACCTACACAGCAAGGCCAGCATGACCATGCCGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 72 bp ACACGAAGCCGCACACGTGCCGCGTGTTGTACACGCTaGCCATGTAGGTCCGCGGCAGTGCACGCTCGATGT +
Preference number: 6 (lower is better)
Translates to: TRSRTRAACCTR*PCRSAAVHARC
Trigger: ACATCGAGCGTGCACTGCCGCGGACCTACATGGCCAGCGTGTACAACACGCGGCACGTGTGCGGCTTCGTGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CAA 90 bp AATTCCCATCCAGAGGCTGGTGGGCAGGACGGGAGGTGTGGGTCATaGTGCAATCCTGGTGAATGCCGCCCAGCAGCCGCAGTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: NSHPEAGGQDGRCGS*CNPGECRPAAAVRV
Trigger: GACCCTCACTGCGGCTGCTGGGCGGCATTCACCAGGATTGCACAATGACCCACACCTCCCGTCCTGCCCACCAGCCTCTGGATGGGAATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS TCA 72 bp GGGCGGTGGAGTACATGGCCACCAGTGAGGACACATTaGAGGGGATCTGCAGTGCCACGTGGACTTCGCCGC +
Preference number: 6 (lower is better)
Translates to: GRWSTWPPVRTH*RGSAVPRGLRR
Trigger: GCGGCGAAGTCCACGTGGCACTGCAGATCCCCTTCAATGTGTCCTCACTGGTGGCCATGTACTCCACCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS TCA 72 bp TGTGCAATCCTGGTGAATGCCGCCCAGCAGCCGCAGTaGGGGTCAGGTGGTGACAGGCATGCAGAGCTAGGC +
Preference number: 6 (lower is better)
Translates to: CAILVNAAQQPQ*GSGGDRHAELG
Trigger: GCCTAGCTCTGCATGCCTGTCACCACCTGACCCTCACTGCGGCTGCTGGGCGGCATTCACCAGGATTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS GCA 72 bp ATGAACACCAGCGTGGCGTCGGCAGCTTCTGCGTTCTaGATCTTGGCGCACTCTAGCGCGCGGGTGGACACA +
Preference number: 6 (lower is better)
Translates to: MNTSVASAASAF*ILAHSSARVDT
Trigger: TGTGTCCACCCGCGCGCTAGAGTGCGCCAAGATGCAGAACGCAGAAGCTGCCGACGCCACGCTGGTGTTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CAA 90 bp ACAAGCTCCAGACAGGATGCACCTTTACTTTGTGGCCCAAGCCTCTaGGTGCTGTGGGCCCTGGCCACTGTCGGTGAGCAGCATGGCGGG +
Preference number: 6 (lower is better)
Translates to: TSSRQDAPLLCGPSL*VLWALATVGEQHGG
Trigger: CCCGCCATGCTGCTCACCGACAGTGGCCAGGGCCCACAGCACCAAGAGGCTTGGGCCACAAAGTAAAGGTGCATCCTGTCTGGAGCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS CCA 72 bp GATGATGACCGTGTGCCCCAGCAGGATCAGATAGTGTaGCGTCCAGAGCCCAAACTGCGTGCACACGGTGGC +
Preference number: 6 (lower is better)
Translates to: DDDRVPQQDQIV*RPEPKLRAHGG
Trigger: GCCACCGTGTGCACGCAGTTTGGGCTCTGGACGCCACACTATCTGATCCTGCTGGGGCACACGGTCATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 72 bp GACAGGATGCACCTTTACTTTGTGGCCCAAGCCTCTTaGTGCTGTGGGCCCTGGCCACTGTCGGTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: DRMHLYFVAQAS*CCGPWPLSVSS
Trigger: GCTGCTCACCGACAGTGGCCAGGGCCCACAGCACCAAGAGGCTTGGGCCACAAAGTAAAGGTGCATCCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474396.1
CDS CCA 72 bp TGTCATTTGGCCCCGGCTGACCTCCTACTCTCGGAGTaGAGTAGAAAGCGTCTCAGGCAGACGAGCAGACGG +
Preference number: 6 (lower is better)
Translates to: CHLAPADLLLSE*SRKRLRQTSRR
Trigger: CCGTCTGCTCGTCTGCCTGAGACGCTTTCTACTCCACTCCGAGAGTAGGAGGTCAGCCGGGGCCAAATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427680.1
CDS CAA 72 bp TTGACAAAGTACACGTCCGGCATGGTCATGCTGGCCTaGCTGTGTAGGTTGGCCAGCACCAGCAGGGCGTTG +
Preference number: 6 (lower is better)
Translates to: LTKYTSGMVMLA*LCRLASTSRAL
Trigger: CAACGCCCTGCTGGTGCTGGCCAACCTACACAGCAAGGCCAGCATGACCATGCCGGACGTGTACTTTGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 72 bp AGCTATCTCGGGAAGCCTGATGTCCACCATGTCATTTaGCCCCGGCTGACCTCCTACTCTCGGAGTGGAGTA +
Preference number: 6 (lower is better)
Translates to: SYLGKPDVHHVI*PRLTSYSRSGV
Trigger: TACTCCACTCCGAGAGTAGGAGGTCAGCCGGGGCCAAATGACATGGTGGACATCAGGCTTCCCGAGATAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427680.1
CDS TCA 72 bp GGTTCTGGTTGGGGAGCCAGGCCTTACAGTAGTTCTTaGAGGAGCTGCACAGCAGGTCATGGGTACTGTGAG +
Preference number: 6 (lower is better)
Translates to: GSGWGARPYSSS*RSCTAGHGYCE
Trigger: CTCACAGTACCCATGACCTGCTGTGCAGCTCCTTCAAGAACTACTGTAAGGCCTGGCTCCCCAACCAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481403.1
CDS CCA 72 bp CGCAGGGCAGCTTTTTCATCAGCCGTTGGAGCTTGCTaGGGAAGCTCTGGTTCATGTAGCGGTAGAGAAGTG +
Preference number: 6 (lower is better)
Translates to: RRAAFSSAVGAC*GSSGSCSGREV
Trigger: CACTTCTCTACCGCTACATGAACCAGAGCTTCCCCAGCAAGCTCCAACGGCTGATGAAAAAGCTGCCCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS CCA 72 bp GCTGGGGAAGCTCTGGTTCATGTAGCGGTAGAGAAGTaGTGTCACAAAGCTGCTGGAGAAGGCCAGGAGTTT +
Preference number: 6 (lower is better)
Translates to: AGEALVHVAVEK*CHKAAGEGQEF
Trigger: AAACTCCTGGCCTTCTCCAGCAGCTTTGTGACACCACTTCTCTACCGCTACATGAACCAGAGCTTCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397095.2
ENST00000444847.2
CDS TCA 72 bp GTTCTTAAGTCACTTGTCTTCAGAGGCCTTCTTCATTaGGGAAGACAACAGGGGTTCTGGTTGGGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: VLKSLVFRGLLH*GRQQGFWLGSQ
Trigger: CTGGCTCCCCAACCAGAACCCCTGTTGTCTTCCTCAATGAAGAAGGCCTCTGAAGACAAGTGACTTAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481403.1
CDS GCA 72 bp CCTTTAAAGCAAGCCTCTTGGCCCTCTGTTATTGAATaGTGGCCTCTGCTAGGTGCTGCAGGTAGCAAAAGA +
Preference number: 6 (lower is better)
Translates to: PLKQASWPSVIE*WPLLGAAGSKR
Trigger: TCTTTTGCTACCTGCAGCACCTAGCAGAGGCCAGCATTCAATAACAGAGGGCCAAGAGGCTTGCTTTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481403.1
CDS CCA 72 bp TTCCGTGTGGACAGGAGCTGGCTATTTAAAGTGGAATaGAGGACTCAAGTACATCTTCATGGGCAGGGAAGA +
Preference number: 6 (lower is better)
Translates to: FRVDRSWLFKVE*RTQVHLHGQGR
Trigger: TCTTCCCTGCCCATGAAGATGTACTTGAGTCCTCCATTCCACTTTAAATAGCCAGCTCCTGTCCACACGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481403.1
CDS CCA 72 bp CATACAAGTTTGCAGAGGCCTTTAAAGCAAGCCTCTTaGCCCTCTGTTATTGAATGCTGGCCTCTGCTAGGT +
Preference number: 6 (lower is better)
Translates to: HTSLQRPLKQAS*PSVIECWPLLG
Trigger: ACCTAGCAGAGGCCAGCATTCAATAACAGAGGGCCAAGAGGCTTGCTTTAAAGGCCTCTGCAAACTTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481403.1
CDS CCA 72 bp ATCTCATCACCACTATGCGTGAGGAGCCTGGGAACATaGTCAGAACCATTTTACTCATACAAGTTTGCAGAG +
Preference number: 6 (lower is better)
Translates to: ISSPLCVRSLGT*SEPFYSYKFAE
Trigger: CTCTGCAAACTTGTATGAGTAAAATGGTTCTGACCATGTTCCCAGGCTCCTCACGCATAGTGGTGATGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481403.1
CDS CAA 72 bp TGGGAACATGGTCAGAACCATTTTACTCATACAAGTTaGCAGAGGCCTTTAAAGCAAGCCTCTTGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: WEHGQNHFTHTS*QRPLKQASWPS
Trigger: AGAGGGCCAAGAGGCTTGCTTTAAAGGCCTCTGCAAACTTGTATGAGTAAAATGGTTCTGACCATGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481403.1