RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPR137 (Homo sapiens)

Ensembl gene IDs: ENSG00000173264

Ensembl transcript IDs: ENST00000313074.7, ENST00000377702.8, ENST00000411458.5, ENST00000438980.7, ENST00000535675.5, ENST00000536017.1, ENST00000536282.1, ENST00000536667.5, ENST00000538032.5, ENST00000538244.1, ENST00000539833.5, ENST00000539851.5, ENST00000540370.1, ENST00000541952.1, ENST00000542190.5, ENST00000543383.5, ENST00000545366.1, ENST00000546139.5, ENST00000546201.5

Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GCAGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCCGACCCCCAGGATCCTaGGCAAGAAGCGGCAGACAA +
Preference number: 2 (lower is better)
Translates to: AARSRPEEGVATTPRILGRPPGS*ARSGRQ
Trigger: TTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCG...GCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
3UTR-3UTR CCA 90 bp ACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTGGTGCTGTGGGCATCTaGCAGCCAGGGCCATGCCCC +
Preference number: 2 (lower is better)
Translates to: TTPRILGKKRQTNLAQGPGAVGI*QPGPCP
Trigger: GGGGCATGGCCCTGGCTGCCAGATGCCCACAGCACC...AGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
3UTR-3UTR CCA 90 bp GGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCATCTCATGCCAGGGTGCTGTaGGCATCTGGCAGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: GSGVEAEVAGHARVLWASHARVL*ASGSQG
Trigger: GCCCTGGCTGCCAGATGCCCACAGCACCCTGGCATG...AGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
3UTR-3UTR CCA 90 bp ACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTCATGCCAGGGTGCTGTaGGCATCTGGCAGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: TTPRILGKKRQTNLAQGPHARVL*ASGSQG
Trigger: GCCCTGGCTGCCAGATGCCCACAGCACCCTGGCATG...AGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
3UTR-3UTR CCA 90 bp CACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCGGAGTGGTCTTCGTCTaGCTGCCCCCATACCAGCCC +
Preference number: 2 (lower is better)
Translates to: HDPQDPGQEAADKLGTGAGVVFV*LPPYQP
Trigger: GGGCTGGTATGGGGGCAGCCAGACGAAGACCACTCC...GGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539851.5
3UTR-3UTR TCA 90 bp GAGGATGTGGCTGGTGCTCAGGTCCTGTGGGGGCCGGTGCACCCGGAAGAAGCCCCCACACGAAGAGGATaGGGCCAAATACCAGGTAGC +
Preference number: 2 (lower is better)
Translates to: EDVAGAQVLWGPVHPEEAPTRRG*GQIPGS
Trigger: GCTACCTGGTATTTGGCCTCATCCTCTTCGTGTGGG...GGCTTCTTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACCAGCCACATCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546201.5
3UTR-3UTR GCA 90 bp AGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACAGGTCATGCCAGGGTaGTGTGGGCATCTGGCAGCC +
Preference number: 2 (lower is better)
Translates to: RGGGSHDPQDPGQEAADKQVMPG*CGHLAA
Trigger: GGCTGCCAGATGCCCACAGCACCCTGGCATGACCTG...TTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
3UTR-3UTR GCA 90 bp CCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCAGAGGTGGCAGGTCATaGCAGGGTGCTGTGGGCATC +
Preference number: 2 (lower is better)
Translates to: PRPPGSWARSGRQTWHRGRGGRS*QGAVGI
Trigger: GATGCCCACAGCACCCTGGCATGACCTGCCACCTCT...GCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
3UTR-3UTR CCA 90 bp GTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGGGGGATCACGTCTGTaGGGTGGAGTAGAGACTGTG +
Preference number: 2 (lower is better)
Translates to: VAGSGVEAEVAGHARVLWGGSRL*GGVETV
Trigger: CACAGTCTCTACTCCACCCCACAGACGTGATCCCCC...CCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTAC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000539851.5
3UTR-3UTR TCA 90 bp CCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCGCAGACACTGTTTATTaGGTGGCAGGCACAGGAGAG +
Preference number: 2 (lower is better)
Translates to: PRPPGSWARSGRQTWHRGADTVY*VAGTGE
Trigger: CTCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGC...GCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
3UTR-3UTR GCA 90 bp AAAGAAGTAGGACCGAGAGGCAAAGACCTGCCCATTGAGGATGTGGCTGGTGCTTCCTGTGGGGGCCGGTaGACCCGGAAGAAGCCCACC +
Preference number: 2 (lower is better)
Translates to: KEVGPRGKDLPIEDVAGASCGGR*TRKKPT
Trigger: GGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGA...AGCACCAGCCACATCCTCAATGGGCAGGTCTTTGCCTCTCGGTCCTACTTCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546201.5
3UTR-3UTR CCA 90 bp GTGGGGCGCAGACACTGTTTATTGAGTGGCAGGCACAGGAGAGGTAGCTGGCTCGTGTGGAAGCAGAGGTaGCAGGTCATGCCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: VGRRHCLLSGRHRRGSWLVWKQR*QVMPGC
Trigger: GCACCCTGGCATGACCTGCCACCTCTGCTTCCACAC...GAGCCAGCTACCTCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGCGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
3UTR-3UTR CCA 90 bp ACAGTGCCCAGCCCGGTCAAAGAAGTAGGACCGAGAGGCAAAGACCTGCCCATTAGCCCACCAGCAGGGTaGTGGGCAGTAGCTCCCACA +
Preference number: 2 (lower is better)
Translates to: TVPSPVKEVGPRGKDLPISPPAG*WAVAPT
Trigger: TGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCT...AATGGGCAGGTCTTTGCCTCTCGGTCCTACTTCTTTGACCGGGCTGGGCACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546201.5
3UTR GCA 72 bp AGGATGTGGCTGGTGCTCAGGTCCTGTGGGGGCCGGTaGACCCGGAAGAAGCCCACCAGCAGGGTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: RMWLVLRSCGGR*TRKKPTSRVVG
Trigger: GCCCACCACCCTGCTGGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACCAGCCACATCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546201.5
3UTR GCA 72 bp AGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATaGCAGGGTGCTGTGGGCATCTGGCAGCCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: SWLRCGSRGGRS*QGAVGIWQPGP
Trigger: TGGCCCTGGCTGCCAGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
3UTR-3UTR CAA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCAAAGCGGCAGACAAACTaGGCACAGGGGCCTAGGGTG +
Preference number: 3 (lower is better)
Translates to: AGSGVEAEVAGHARVLWAKRQTN*AQGPRV
Trigger: CACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTT...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
3UTR TCA 72 bp GCAGGGTGGTGGGCAGTAGCTCCCACACGAAGAGGATaGGGCCAAATACCAGGTAGCCTTTGTTCCCCAGGT +
Preference number: 3 (lower is better)
Translates to: AGWWAVAPTRRG*GQIPGSLCSPG
Trigger: ACCTGGGGAACAAAGGCTACCTGGTATTTGGCCTCATCCTCTTCGTGTGGGAGCTACTGCCCACCACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR CCA 90 bp GCAGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCTGGAGGGCGCCCGCCTaGCGACGAGGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AARSRPEEGVATTPRILGWRAPA*RRGRGR
Trigger: CCTGCCTCTGCCTCGTCGCCAGGCGGGCGCCCTCCA...GCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGTGGAGGGCGCCCGCCTaGCGACGAGGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARSRPEEGVATTPRILGKWRAPA*RRGRGR
Trigger: CCTGCCTCTGCCTCGTCGCCAGGCGGGCGCCCTCCA...CTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GCAGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAGGGCCCCAGGCGGTTaGCGCGGGGAGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: AARSRPEEGVATTPRILGRAPGG*RGEYLG
Trigger: TCCGAGATACTCCCCGCGCCAACCGCCTGGGGCCCT...GCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp GAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCCGCCTGCCAGGCGTaGAGCCCCCACGGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: EGVATTPRILGKKRQTNLAACQA*SPHGPY
Trigger: GTAGGGCCCGTGGGGGCTTCACGCCTGGCAGGCGGC...CAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000377702.8
CDS-3UTR CCA 90 bp AGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAACAGGGTCACAGCAGGTaGCAGCGCAGGCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: SKEPARGGGSHDPQDPGQQGHSR*QRRHQP
Trigger: GGGCTGGTGCCTGCGCTGCCACCTGCTGTGACCCTG...TTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTGGAGGGCGCCCGCCTaGCGACGAGGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HDPQDPGQEAADKLGTGAWRAPA*RRGRGR
Trigger: CCTGCCTCTGCCTCGTCGCCAGGCGGGCGCCCTCCA...GGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp ACAGGAGCAGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCGTGTCCAGCCGGCTCTaGGGGGCCAAGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TGAARSRPEEGVATTPRIVSSRL*GAKASA
Trigger: AGCACTGGCCTTGGCCCCCCAGAGCCGGCTGGACAC...GATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGCTCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GAGGATGTGGCTGGTGCTCAGGTCCTGTGGGGGCCGGTGCACCCGGAAGAAGCCGGTGCTCAGGTCCTGTaGGGGCCGGTGCACCCGGAA +
Preference number: 4 (lower is better)
Translates to: EDVAGAQVLWGPVHPEEAGAQVL*GPVHPE
Trigger: TTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACC...GGCTTCTTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACCAGCCACATCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR CCA 90 bp ACAGGAGCAGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCGGTGCTGTGGGCATCTaGCAGCCAGGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: TGAARSRPEEGVATTPRIGAVGI*QPGPCP
Trigger: GGGGCATGGCCCTGGCTGCCAGATGCCCACAGCACC...GATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGCTCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACAGCCGGCTCAGGTCGTaGGGACCCGGGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: EEGVATTPRILGKKRQTNSRLRS*GPGAPA
Trigger: AGCCGGAGCCCCGGGTCCCCACGACCTGAGCCGGCT...GTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR CCA 90 bp GCAGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCGACATACAGGTCCTGTaGGGGCCGGTGCACCCGGAA +
Preference number: 4 (lower is better)
Translates to: AARSRPEEGVATTPRILGDIQVL*GPVHPE
Trigger: TTCCGGGTGCACCGGCCCCCACAGGACCTGTATGTC...GCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS-3UTR CCA 90 bp GGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGCCAGTGCCCCCGAGATaGCGCGGGAGGTGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: GSWLRCGSRGGRSCQGAVPVPPR*RGRCPP
Trigger: CGGGGGACACCTCCCGCGCCATCTCGGGGGCACTGG...CACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS-3UTR TCA 90 bp GCAGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCGAGACAGCGCGCAGATaGCGAACAGGGAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: AARSRPEEGVATTPRILGETARR*RTGSRS
Trigger: TGAGCGACTCCCTGTTCGTCATCTGCGCGCTGTCTC...GCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp CTGTGCTCCCAGGAGCAGCCCTCATCTTCACAGTGCCCAGCCCGGTCAAAGAAGGCCGCCTGCCAGGCGTaGAGCCCCCACGGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: LCSQEQPSSSQCPARSKKAACQA*SPHGPY
Trigger: GTAGGGCCCGTGGGGGCTTCACGCCTGGCAGGCGGC...CTTCTTTGACCGGGCTGGGCACTGTGAAGATGAGGGCTGCTCCTGGGAGCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR TCA 90 bp GGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGGAGGGGGAGAGCCGGCTaGTACCCGTCGGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GKKRQTNLAQGPRVRGTGRGRAG*YPSGQG
Trigger: GCCCTGACCCGACGGGTATCAGCCGGCTCTCCCCCT...CCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR CCA 90 bp AGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCAGGGCCCCAGGCGGTTaGCGCGGGGAGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: SWLRCGSRGGRSCQGAVGRAPGG*RGEYLG
Trigger: TCCGAGATACTCCCCGCGCCAACCGCCTGGGGCCCT...GCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTTGGAGGGCGCCCGCCTaGCGACGAGGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGSWLRCGSRGGRSCQGAWRAPA*RRGRGR
Trigger: CCTGCCTCTGCCTCGTCGCCAGGCGGGCGCCCTCCA...AGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCAGTGTCCAGCCGGCTCTaGGGGGCCAAGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: AGSGVEAEVAGHARVLWAVSSRL*GAKASA
Trigger: AGCACTGGCCTTGGCCCCCCAGAGCCGGCTGGACAC...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAAGCCCACCAGCAGGGTaGTGGGCAGTAGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: PARGGGSHDPQDPGQEAASPPAG*WAVAPT
Trigger: TGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCT...TGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCAGGTGCTCAGGTCCTGTaGGGGCCGGTGCACCCGGAA +
Preference number: 4 (lower is better)
Translates to: AGSGVEAEVAGHARVLWAGAQVL*GPVHPE
Trigger: TTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACC...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
CDS-3UTR CCA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCAGTGGCCGCCTGGTCCTaGCACCTGGTGCTCTCACCC +
Preference number: 4 (lower is better)
Translates to: AGSGVEAEVAGHARVLWAVAAWS*HLVLSP
Trigger: GGGTGAGAGCACCAGGTGCCAGGACCAGGCGGCCAC...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313074.7
CDS-3UTR CCA 90 bp CACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCCGAAGCTTCCGCGCCTaGGAGGAGGAGCGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: HDPQDPGQEAADKLGTGARSFRA*EEERGA
Trigger: CGCTCCCCGCTCCTCCTCCCAGGCGCGGAAGCTTCG...GGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS-3UTR TCA 90 bp GCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGTCAGGGAGGGAGGCCTaGATCCCGGAGACAGACAAG +
Preference number: 4 (lower is better)
Translates to: ARSRPEEGVATTPRILGKSGREA*IPETDK
Trigger: CTTGTCTGTCTCCGGGATTCAGGCCTCCCTCCCTGA...CTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR GCA 90 bp GGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGTCCTGTGGGGGCCGGTaGACCCGGAAGAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: GSWLRCGSRGGRSCQGAVSCGGR*TRKKPT
Trigger: GGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGA...CACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp GGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCATCTTCCTGTGGGGGCCGGTaGACCCGGAAGAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: GSGVEAEVAGHARVLWASSCGGR*TRKKPT
Trigger: GGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGA...AGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp GGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGGTCCTGTGGGGGCCGGTaGACCCGGAAGAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: GKKRQTNLAQGPRVRGTGSCGGR*TRKKPT
Trigger: GGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGA...CCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR GCA 90 bp AGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCCTCTCACCCCGGCTGTaGTCCCAGGAGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SWLRCGSRGGRSCQGAVGLSPRL*SQEQPS
Trigger: TGAGGGCTGCTCCTGGGAGCACAGCCGGGGTGAGAG...GCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp AGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAACAGGTCATGCCAGGGTaGTGTGGGCATCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SKEPARGGGSHDPQDPGQQVMPG*CGHLAA
Trigger: GGCTGCCAGATGCCCACAGCACCCTGGCATGACCTG...TTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp AGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAAGGCCTTATCTCCAGTaGCCCCGAGATGGCGCGGGA +
Preference number: 4 (lower is better)
Translates to: SKEPARGGGSHDPQDPGQRPYLQ*PRDGAG
Trigger: TCCCGCGCCATCTCGGGGGCACTGGAGATAAGGCCT...TTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS-3UTR CCA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCAGGGTCACAGCAGGTaGCAGCGCAGGCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVQGHSR*QRRHQP
Trigger: GGGCTGGTGCCTGCGCTGCCACCTGCTGTGACCCTG...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCATCTAGGGCCCCAGGCGGTTaGCGCGGGGAGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: GSGVEAEVAGHARVLWASRAPGG*RGEYLG
Trigger: TCCGAGATACTCCCCGCGCCAACCGCCTGGGGCCCT...AGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGCCCATCGCGGCCGCCTaGCACACACTGGTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: VAGSGVEAEVAGHARVLWPIAAA*HTLVPL
Trigger: CAAGGGGACCAGTGTGTGCCAGGCGGCCGCGATGGG...CCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp ACAGGAGCAGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCAGCCCACCAGCAGGGTaGTGGGCAGTAGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: TGAARSRPEEGVATTPRISPPAG*WAVAPT
Trigger: TGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCT...GATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGCTCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CACCCCGGCTGTGCTCCCAGGAGCAGCCCTCATCTTCACAGTGCCCAGCCCGGTAGCCCACCAGCAGGGTaGTGGGCAGTAGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: HPGCAPRSSPHLHSAQPGSPPAG*WAVAPT
Trigger: TGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCT...ACCGGGCTGGGCACTGTGAAGATGAGGGCTGCTCCTGGGAGCACAGCCGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR CCA 90 bp GGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCATCTGGTGCTCAGGTCCTGTaGGGGCCGGTGCACCCGGAA +
Preference number: 4 (lower is better)
Translates to: GSGVEAEVAGHARVLWASGAQVL*GPVHPE
Trigger: TTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACC...AGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
CDS-3UTR CCA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGGTGGTGGTGGCCGCCTaGTCCTGGCACCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVVVVAA*SWHLVL
Trigger: GAGCACCAGGTGCCAGGACCAGGCGGCCACCACCAC...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313074.7
CDS-3UTR CCA 90 bp GTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGGTGCTGTGGGCATCTaGCAGCCAGGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: VAGSGVEAEVAGHARVLWGAVGI*QPGPCP
Trigger: GGGGCATGGCCCTGGCTGCCAGATGCCCACAGCACC...CCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGGTGTGGAAGCAGAGGTaGCAGGTCATGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: ARSRPEEGVATTPRILGKVWKQR*QVMPGC
Trigger: GCACCCTGGCATGACCTGCCACCTCTGCTTCCACAC...CTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCACCGGCTCACGCCCGATaGCACCATACCAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AGSGVEAEVAGHARVLWAPAHAR*HHTSSQ
Trigger: CTGGGAGCTGGTATGGTGCCATCGGGCGTGAGCCGG...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp GGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTAGGTCCTCAGGCCGCTaGTGGGAGAGCCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GGGSHDPQDPGQEAADKLRSSGR*WESRLR
Trigger: CCTGAGCCGGCTCTCCCATCAGCGGCCTGAGGACCT...AAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR GCA 90 bp GGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTTCCTGTGGGGGCCGGTaGACCCGGAAGAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: GGGSHDPQDPGQEAADKLSCGGR*TRKKPT
Trigger: GGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGA...AAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp AGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGTCCTGTGGGGGCCGGTaGACCCGGAAGAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: SHDPQDPGQEAADKLGTGSCGGR*TRKKPT
Trigger: GGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGA...CCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTCTCACCCCGGCTGTaGTCCCAGGAGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVLSPRL*SQEQPS
Trigger: TGAGGGCTGCTCCTGGGAGCACAGCCGGGGTGAGAG...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCATGGTCTTCGTCTGGCTaGCCCCATACCAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: AGSGVEAEVAGHARVLWAWSSSG*PHTSPA
Trigger: AGCCGGGCTGGTATGGGGGCAGCCAGACGAAGACCA...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CCCATCCTAGGGGGACGGCACAAGCTCACTATGACAGGAGCAGCAAGGAGCCGGCAGGGTCACAGCAGGTaGCAGCGCAGGCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: PILGGRHKLTMTGAARSRQGHSR*QRRHQP
Trigger: GGGCTGGTGCCTGCGCTGCCACCTGCTGTGACCCTG...CCGGCTCCTTGCTGCTCCTGTCATAGTGAGCTTGTGCCGTCCCCCTAGGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CCCATCCTAGGGGGACGGCACAAGCTCACTATGACAGGAGCAGCAAGGAGCCGGAGGGCCCCAGGCGGTTaGCGCGGGGAGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: PILGGRHKLTMTGAARSRRAPGG*RGEYLG
Trigger: TCCGAGATACTCCCCGCGCCAACCGCCTGGGGCCCT...CCGGCTCCTTGCTGCTCCTGTCATAGTGAGCTTGTGCCGTCCCCCTAGGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CGGAAGAAGCCCACCAGCAGGGTGGTGGGCAGTAGCTCCCACACGAAGAGGATGAGGGCCCCAGGCGGTTaGCGCGGGGAGTATCTCGGA +
Preference number: 4 (lower is better)
Translates to: RKKPTSRVVGSSSHTKRMRAPGG*RGEYLG
Trigger: TCCGAGATACTCCCCGCGCCAACCGCCTGGGGCCCT...CATCCTCTTCGTGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCTTCTTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR CCA 90 bp GGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGTGTGCCCGGCGCCGATaGGAGAGCACAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: GSWLRCGSRGGRSCQGAVCARRR*ESTAHS
Trigger: GCTGTGTGCTGTGCTCTCCCATCGGCGCCGGGCACA...CACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTGTGCCCGGCGCCGATaGGAGAGCACAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: EEGVATTPRILGKKRQTNCARRR*ESTAHS
Trigger: GCTGTGTGCTGTGCTCTCCCATCGGCGCCGGGCACA...GTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTGTGCCCGGCGCCGATaGGAGAGCACAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: HDPQDPGQEAADKLGTGACARRR*ESTAHS
Trigger: GCTGTGTGCTGTGCTCTCCCATCGGCGCCGGGCACA...GGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGCCGCCTGGCACACACTaGTCCCCTTGGCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EVAGSGVEAEVAGHARVLPPGTH*SPWPPG
Trigger: ACCTGGAGGCCAAGGGGACCAGTGTGTGCCAGGCGG...CAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTACCCATCGCGGCCGCCTaGCACACACTGGTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: RPPGSWARSGRQTWHRGLPIAAA*HTLVPL
Trigger: CAAGGGGACCAGTGTGTGCCAGGCGGCCGCGATGGG...TAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACCCATCGCGGCCGCCTaGCACACACTGGTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: RGGGSHDPQDPGQEAADKPIAAA*HTLVPL
Trigger: CAAGGGGACCAGTGTGTGCCAGGCGGCCGCGATGGG...TTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGTGTCCAGCCGGCTCTaGGGGGCCAAGGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SHDPQDPGQEAADKLGTGVSSRL*GAKASA
Trigger: AGCACTGGCCTTGGCCCCCCAGAGCCGGCTGGACAC...CCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCCCACCAGCAGGGTGGTaGGCAGTAGCTCCCACACGA +
Preference number: 4 (lower is better)
Translates to: SWLRCGSRGGRSCQGAVGPPAGW*AVAPTR
Trigger: TCGTGTGGGAGCTACTGCCCACCACCCTGCTGGTGG...GCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGGGTGCTCAGGTCCTGTaGGGGCCGGTGCACCCGGAA +
Preference number: 4 (lower is better)
Translates to: PRILGKKRQTNLAQGPRVGAQVL*GPVHPE
Trigger: TTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACC...CACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377702.8
ENST00000438980.7
CDS-3UTR CCA 90 bp GAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGCCTGGTCCTGGCACCTaGTGCTCTCACCCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: EVAGSGVEAEVAGHARVLPGPGT*CSHPGC
Trigger: ACAGCCGGGGTGAGAGCACCAGGTGCCAGGACCAGG...CAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313074.7
CDS-3UTR CCA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCATGCCAGGGTGCTGTaGGCATCTGGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVHARVL*ASGSQG
Trigger: GCCCTGGCTGCCAGATGCCCACAGCACCCTGGCATG...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGCCGGCTCACGCCCGATaGCACCATACCAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GSWLRCGSRGGRSCQGAVPAHAR*HHTSSQ
Trigger: CTGGGAGCTGGTATGGTGCCATCGGGCGTGAGCCGG...CACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGGCCGGCTCACGCCCGATaGCACCATACCAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GKKRQTNLAQGPRVRGTGPAHAR*HHTSSQ
Trigger: CTGGGAGCTGGTATGGTGCCATCGGGCGTGAGCCGG...CCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR CCA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCCGGCTCACGCCCGATaGCACCATACCAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVPAHAR*HHTSSQ
Trigger: CTGGGAGCTGGTATGGTGCCATCGGGCGTGAGCCGG...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCGGAGTGGTCTTCGTCTaGCTGCCCCCATACCAGCCC +
Preference number: 4 (lower is better)
Translates to: SWLRCGSRGGRSCQGAVGGVVFV*LPPYQP
Trigger: GGGCTGGTATGGGGGCAGCCAGACGAAGACCACTCC...GCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGGGTGGTGGTGGCCGCCTaGTCCTGGCACCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GKKRQTNLAQGPRVRGTGVVVAA*SWHLGE
Trigger: TTCTCCCAGGTGCCAGGACCAGGCGGCCACCACCAC...CCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR CCA 90 bp GAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGGTGGTGGTGGCCGCCTaGTCCTGGCACCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: EVAGSGVEAEVAGHARVLVVVAA*SWHLGE
Trigger: TTCTCCCAGGTGCCAGGACCAGGCGGCCACCACCAC...CAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGGGGGGCCAAGGCCAGTaGTGTCAGGTTGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVGGQGQ*CQVVAG
Trigger: GCCTGCTACAACCTGACAGCACTGGCCTTGGCCCCC...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp GGCCGGTGCACCCGGAAGAAGCCCACCAGCAGGGTGGTGGGCAGTAGCTCCCACCGAGAGGCAAAGACCTaGCCATTGAGGATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRCTRKKPTSRVVGSSSHREAKT*PLRMWL
Trigger: CAGCCACATCCTCAATGGGCAGGTCTTTGCCTCTCG...GTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCTTCTTCCGGGTGCACCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR GCA 90 bp ACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTCTCTCACCCCGGCTGTaGTCCCAGGAGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TTPRILGKKRQTNLAQGPLSPRL*SQEQPS
Trigger: TGAGGGCTGCTCCTGGGAGCACAGCCGGGGTGAGAG...AGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp AGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGGTCCTGGCACCTGGTaGTCTCACCCCGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RGSWLRCGSRGGRSCQGAGPGTW*SHPGCA
Trigger: AGCACAGCCGGGGTGAGAGCACCAGGTGCCAGGACC...AGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313074.7
CDS-3UTR GCA 90 bp GTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGCAGGTCATGCCAGGGTaGTGTGGGCATCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VAGSGVEAEVAGHARVLWQVMPG*CGHLAA
Trigger: GGCTGCCAGATGCCCACAGCACCCTGGCATGACCTG...CCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp GAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACCAGGTCATGCCAGGGTaGTGTGGGCATCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EEGVATTPRILGKKRQTNQVMPG*CGHLAA
Trigger: GGCTGCCAGATGCCCACAGCACCCTGGCATGACCTG...GTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCAAGAGGTGGCAGGTCATaGCAGGGTGCTGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: AGSGVEAEVAGHARVLWARGGRS*QGAVGI
Trigger: GATGCCCACAGCACCCTGGCATGACCTGCCACCTCT...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp GGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGGTGGTCTTCGTCTGGCTaGCCCCATACCAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: GKKRQTNLAQGPRVRGTGWSSSG*PHTSPA
Trigger: AGCCGGGCTGGTATGGGGGCAGCCAGACGAAGACCA...CCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR CCA 90 bp AGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAATGTGCCCGGCGCCGATaGGAGAGCACAGCACACAGC +
Preference number: 4 (lower is better)
Translates to: RGGGSHDPQDPGQEAADKCARRR*ESTAHS
Trigger: GCTGTGTGCTGTGCTCTCCCATCGGCGCCGGGCACA...TTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AGGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTCCGCCTGGCACACACTaGTCCCCTTGGCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RRGSWLRCGSRGGRSCQGPPGTH*SPWPPG
Trigger: ACCTGGAGGCCAAGGGGACCAGTGTGTGCCAGGCGG...ACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AGGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTCATAGAGCAGGACCATaGCGCCACCCATCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: RRGSWLRCGSRGGRSCQGHRAGP*RHPSRP
Trigger: CGGCCGCGATGGGTGGCGCCATGGTCCTGCTCTATG...ACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACATAGAGCAGGACCATaGCGCCACCCATCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GVATTPRILGKKRQTNLAHRAGP*RHPSRP
Trigger: CGGCCGCGATGGGTGGCGCCATGGTCCTGCTCTATG...TGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CCCATCCTAGGGGGACGGCACAAGCTCACTATGACAGGAGCAGCAAGGAGCCGGCATAGAGCAGGACCATaGCGCCACCCATCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PILGGRHKLTMTGAARSRHRAGP*RHPSRP
Trigger: CGGCCGCGATGGGTGGCGCCATGGTCCTGCTCTATG...CCGGCTCCTTGCTGCTCCTGTCATAGTGAGCTTGTGCCGTCCCCCTAGGATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCATGTAGCAGGCCCGGCTaGCATAGAGCAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: AGSGVEAEVAGHARVLWACSRPG*HRAGPW
Trigger: CCATGGTCCTGCTCTATGCCAGCCGGGCCTGCTACA...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCTGTAGCAGGCCCGGCTaGCATAGAGCAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: SWLRCGSRGGRSCQGAVGCSRPG*HRAGPW
Trigger: CCATGGTCCTGCTCTATGCCAGCCGGGCCTGCTACA...GCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCACCAGCAGGGTGGTaGGCAGTAGCTCCCACACGA +
Preference number: 4 (lower is better)
Translates to: ATTPRILGKKRQTNLAQGPPAGW*AVAPTR
Trigger: TCGTGTGGGAGCTACTGCCCACCACCCTGCTGGTGG...CCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGGAGCCCACCAGCAGGGTaGTGGGCAGTAGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: GKKRQTNLAQGPRVRGTGSPPAG*WAVAPT
Trigger: TGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCT...CCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR CCA 90 bp GGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTCATGCCAGGGTGCTGTaGGCATCTGGCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GGGSHDPQDPGQEAADKLHARVL*ASGSQG
Trigger: GCCCTGGCTGCCAGATGCCCACAGCACCCTGGCATG...AAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCAGTGTGGAAGCAGAGGTaGCAGGTCATGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: AGSGVEAEVAGHARVLWAVWKQR*QVMPGC
Trigger: GCACCCTGGCATGACCTGCCACCTCTGCTTCCACAC...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCAGACTGCCCGACATACTaGTGCTCTCACCCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: AGSGVEAEVAGHARVLWADCPTY*CSHPGC
Trigger: ACAGCCGGGGTGAGAGCACCAGTATGTCGGGCAGTC...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377702.8
ENST00000438980.7
CDS-3UTR CCA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCACCTGGTCCTGGCACCTaGGAGAAGAGCAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: AGSGVEAEVAGHARVLWAPGPGT*EKSRGV
Trigger: CACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCAGG...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGTGGTGGCCGCCTaGTCCTGGCACCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RGSWLRCGSRGGRSCQGAVVVAA*SWHLGE
Trigger: TTCTCCCAGGTGCCAGGACCAGGCGGCCACCACCAC...AGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGTGGTGGTGGCCGCCTaGTCCTGGCACCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RPPGSWARSGRQTWHRGLVVVAA*SWHLGE
Trigger: TTCTCCCAGGTGCCAGGACCAGGCGGCCACCACCAC...TAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTCGTTCATGTCGTCCTaGGTGGAGGGGGAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: HDPQDPGQEAADKLGTGASFMSS*VEGESR
Trigger: CCGGCTCTCCCCCTCCACCCAGGACGACATGAACGA...GGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR CCA 90 bp GGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGGGACATACAGGTCCTGTaGGGGCCGGTGCACCCGGAA +
Preference number: 4 (lower is better)
Translates to: GKKRQTNLAQGPRVRGTGDIQVL*GPVHPE
Trigger: TTCCGGGTGCACCGGCCCCCACAGGACCTGTATGTC...CCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000536282.1
ENST00000539851.5
CDS-3UTR TCA 90 bp GTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGAGACAGCGCGCAGATaGCGAACAGGGAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: VAGSGVEAEVAGHARVLWETARR*RTGSRS
Trigger: TGAGCGACTCCCTGTTCGTCATCTGCGCGCTGTCTC...CCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp CCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCGAGACAGCGCGCAGATaGCGAACAGGGAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: PRPPGSWARSGRQTWHRGETARR*RTGSRS
Trigger: TGAGCGACTCCCTGTTCGTCATCTGCGCGCTGTCTC...GCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp AGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAACAAAGACCTGCCCATTaGGGATGTGGCTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SKEPARGGGSHDPQDPGQQRPAH*GCGWCS
Trigger: TGAGCACCAGCCACATCCTCAATGGGCAGGTCTTTG...TTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377702.8
ENST00000438980.7
CDS-3UTR TCA 90 bp GCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGGCAGACACTGTTTATTaGGTGGCAGGCACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: ARSRPEEGVATTPRILGKADTVY*VAGTGE
Trigger: CTCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGC...CTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp CCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGCACACGCCCAAGGTGTaGGGCAGCGAGGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: PRILGKKRQTNLAQGPRVHTPKV*GSEDVS
Trigger: GCTCACATCCTCGCTGCCTCACACCTTGGGCGTGTG...CACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS-3UTR GCA 90 bp AGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCGTCAAGGTGAAGAACTaGAGGCAGACGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SWLRCGSRGGRSCQGAVGVKVKN*RQTGQQ
Trigger: CTGCTGCCCCGTCTGCCTGCAGTTCTTCACCTTGAC...GCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp CACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCAGAGGTGGCAGGTCATaGCAGGGTGCTGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: HDPQDPGQEAADKLGTGARGGRS*QGAVGI
Trigger: GATGCCCACAGCACCCTGGCATGACCTGCCACCTCT...GGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp GCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGTGCCCGACATACTGGTaGTCTCACCCCGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: ATTPRILGKKRQTNLAQGCPTYW*SHPGCA
Trigger: AGCACAGCCGGGGTGAGAGCACCAGTATGTCGGGCA...CCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp GGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTTGGTCTTCGTCTGGCTaGCCCCATACCAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: GGGSHDPQDPGQEAADKLWSSSG*PHTSPA
Trigger: AGCCGGGCTGGTATGGGGGCAGCCAGACGAAGACCA...AAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp AGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGTGGTCTTCGTCTGGCTaGCCCCATACCAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SHDPQDPGQEAADKLGTGWSSSG*PHTSPA
Trigger: AGCCGGGCTGGTATGGGGGCAGCCAGACGAAGACCA...CCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AGGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTCCACCAGCAGGGTGGTaGGCAGTAGCTCCCACACGA +
Preference number: 4 (lower is better)
Translates to: RRGSWLRCGSRGGRSCQGPPAGW*AVAPTR
Trigger: TCGTGTGGGAGCTACTGCCCACCACCCTGCTGGTGG...ACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACCACCAGCAGGGTGGTaGGCAGTAGCTCCCACACGA +
Preference number: 4 (lower is better)
Translates to: GVATTPRILGKKRQTNLAPPAGW*AVAPTR
Trigger: TCGTGTGGGAGCTACTGCCCACCACCCTGCTGGTGG...TGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTCCACCAGCAGGGTGGTaGGCAGTAGCTCCCACACGA +
Preference number: 4 (lower is better)
Translates to: LGKKRQTNLAQGPRVRGTPPAGW*AVAPTR
Trigger: TCGTGTGGGAGCTACTGCCCACCACCCTGCTGGTGG...AGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR CCA 90 bp AGGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTAGCCCACCAGCAGGGTaGTGGGCAGTAGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: RRGSWLRCGSRGGRSCQGSPPAG*WAVAPT
Trigger: TGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCT...ACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp ACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGCCCACCAGCAGGGTaGTGGGCAGTAGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: TTPRILGKKRQTNLAQGPSPPAG*WAVAPT
Trigger: TGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCT...AGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGCGACCCCCAGGATCCTaGGCAAGAAGCGGCAGACAA +
Preference number: 4 (lower is better)
Translates to: EVAGSGVEAEVAGHARVLRPPGS*ARSGRQ
Trigger: TTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCG...CAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCCGACCCCCAGGATCCTaGGCAAGAAGCGGCAGACAA +
Preference number: 4 (lower is better)
Translates to: HDPQDPGQEAADKLGTGARPPGS*ARSGRQ
Trigger: TTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCG...GGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GTGGGGCGCAGACACTGTTTATTGAGTGGCAGGCACAGGAGAGGTAGCTGGCTCGGTGCTGTGGGCATCTaGCAGCCAGGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: VGRRHCLLSGRHRRGSWLGAVGI*QPGPCP
Trigger: GGGGCATGGCCCTGGCTGCCAGATGCCCACAGCACC...GAGCCAGCTACCTCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGCGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGTGTGGAAGCAGAGGTaGCAGGTCATGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GSWLRCGSRGGRSCQGAVVWKQR*QVMPGC
Trigger: GCACCCTGGCATGACCTGCCACCTCTGCTTCCACAC...CACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGGGTGTGGAAGCAGAGGTaGCAGGTCATGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GKKRQTNLAQGPRVRGTGVWKQR*QVMPGC
Trigger: GCACCCTGGCATGACCTGCCACCTCTGCTTCCACAC...CCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGACTGCCCGACATACTaGTGCTCTCACCCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: VAGSGVEAEVAGHARVLWDCPTY*CSHPGC
Trigger: ACAGCCGGGGTGAGAGCACCAGTATGTCGGGCAGTC...CCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377702.8
ENST00000438980.7
CDS-3UTR CCA 90 bp CTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGAGTGGTCTTCGTCTaGCTGCCCCCATACCAGCCC +
Preference number: 4 (lower is better)
Translates to: LGKKRQTNLAQGPRVRGTGVVFV*LPPYQP
Trigger: GGGCTGGTATGGGGGCAGCCAGACGAAGACCACTCC...AGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR CCA 90 bp CCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGGGAGTGGTCTTCGTCTaGCTGCCCCCATACCAGCCC +
Preference number: 4 (lower is better)
Translates to: PRILGKKRQTNLAQGPRVGVVFV*LPPYQP
Trigger: GGGCTGGTATGGGGGCAGCCAGACGAAGACCACTCC...CACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTCCCCAGAGCCAAGGATaGGGGGATGCAGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: RGSWLRCGSRGGRSCQGAPQSQG*GDAEAQ
Trigger: TTGGGCCTCTGCATCCCCCCATCCTTGGCTCTGGGG...AGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR CCA 90 bp AGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAAAGACCGGATAGGGGTTaGGGGTGTCTCCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RGGGSHDPQDPGQEAADKRPDRG*GCLLPG
Trigger: CCCAGGGAGGAGACACCCCCAACCCCTATCCGGTCT...TTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR TCA 90 bp AGGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTTCAGGGAGGGAGGCCTaGATCCCGGAGACAGACAAG +
Preference number: 4 (lower is better)
Translates to: RRGSWLRCGSRGGRSCQGSGREA*IPETDK
Trigger: CTTGTCTGTCTCCGGGATTCAGGCCTCCCTCCCTGA...ACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313074.7
ENST00000438980.7
CDS-3UTR TCA 90 bp AGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCGCTTCACCTTGGCCTTaGACACCACCTGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SWLRCGSRGGRSCQGAVGASPWP*TPPGQS
Trigger: ACTTTGCCCAGGTGGTGTTCAAGGCCAAGGTGAAGC...GCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp CTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGAGACAGCGCGCAGATaGCGAACAGGGAGTCGCTCA +
Preference number: 4 (lower is better)
Translates to: LGKKRQTNLAQGPRVRGTETARR*RTGSRS
Trigger: TGAGCGACTCCCTGTTCGTCATCTGCGCGCTGTCTC...AGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCACCCACACGAAGAGGATaGGGCCAAATACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: AGSGVEAEVAGHARVLWAPTRRG*GQIPGS
Trigger: GCTACCTGGTATTTGGCCTCATCCTCTTCGTGTGGG...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp AGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCCAAAGACCTGCCCATTaGGGATGTGGCTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SWLRCGSRGGRSCQGAVGQRPAH*GCGWCS
Trigger: TGAGCACCAGCCACATCCTCAATGGGCAGGTCTTTG...GCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp GGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCATCTGTCAAGGTGAAGAACTaGAGGCAGACGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSGVEAEVAGHARVLWASVKVKN*RQTGQQ
Trigger: CTGCTGCCCCGTCTGCCTGCAGTTCTTCACCTTGAC...AGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp GGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGTCAAGGTGAAGAACTaGAGGCAGACGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSWLRCGSRGGRSCQGAVVKVKN*RQTGQQ
Trigger: CTGCTGCCCCGTCTGCCTGCAGTTCTTCACCTTGAC...CACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp CGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAAGAGGTGGCAGGTCATaGCAGGGTGCTGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: RPPGSWARSGRQTWHRGLRGGRS*QGAVGI
Trigger: GATGCCCACAGCACCCTGGCATGACCTGCCACCTCT...TAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp AGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTAGAGGTGGCAGGTCATaGCAGGGTGCTGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: RGSWLRCGSRGGRSCQGARGGRS*QGAVGI
Trigger: GATGCCCACAGCACCCTGGCATGACCTGCCACCTCT...AGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp AGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGTGCCCGACATACTGGTaGTCTCACCCCGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SHDPQDPGQEAADKLGTGCPTYW*SHPGCA
Trigger: AGCACAGCCGGGGTGAGAGCACCAGTATGTCGGGCA...CCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp AGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCTCCCAGAGCCTAGACTaGCCGACATACTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SWLRCGSRGGRSCQGAVGSQSLD*PTYWCS
Trigger: AGAGCACCAGTATGTCGGGCAGTCTAGGCTCTGGGA...GCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377702.8
ENST00000438980.7
CDS-3UTR CCA 90 bp GTGGGGCGCAGACACTGTTTATTGAGTGGCAGGCACAGGAGAGGTAGCTGGCTCCCGCCTGGCACACACTaGTCCCCTTGGCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VGRRHCLLSGRHRRGSWLPPGTH*SPWPPG
Trigger: ACCTGGAGGCCAAGGGGACCAGTGTGTGCCAGGCGG...GAGCCAGCTACCTCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGCGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGTGTAGCAGGCCCGGCTaGCATAGAGCAGGACCATGG +
Preference number: 4 (lower is better)
Translates to: PRILGKKRQTNLAQGPRVCSRPG*HRAGPW
Trigger: CCATGGTCCTGCTCTATGCCAGCCGGGCCTGCTACA...CACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AAGAAGCCCACCAGCAGGGTGGTGGGCAGTAGCTCCCACACGAAGAGGATGAGGCCACCAGCAGGGTGGTaGGCAGTAGCTCCCACACGA +
Preference number: 4 (lower is better)
Translates to: KKPTSRVVGSSSHTKRMRPPAGW*AVAPTR
Trigger: TCGTGTGGGAGCTACTGCCCACCACCCTGCTGGTGG...CCTCATCCTCTTCGTGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR CCA 90 bp GGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGGGGGGGATCACGTCTGTaGGGTGGAGTAGAGACTGTG +
Preference number: 4 (lower is better)
Translates to: GKKRQTNLAQGPRVRGTGGGSRL*GGVETV
Trigger: CACAGTCTCTACTCCACCCCACAGACGTGATCCCCC...CCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR CCA 90 bp AGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTCGACCCCCAGGATCCTaGGCAAGAAGCGGCAGACAA +
Preference number: 4 (lower is better)
Translates to: RGSWLRCGSRGGRSCQGARPPGS*ARSGRQ
Trigger: TTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCG...AGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACGACCCCCAGGATCCTaGGCAAGAAGCGGCAGACAA +
Preference number: 4 (lower is better)
Translates to: GVATTPRILGKKRQTNLARPPGS*ARSGRQ
Trigger: TTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCG...TGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTCCTGGTCCTGGCACCTaGGAGAAGAGCAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LGKKRQTNLAQGPRVRGTPGPGT*EKSRGV
Trigger: CACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCAGG...AGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR CCA 90 bp ACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTCCTGGTCCTGGCACCTaGGAGAAGAGCAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: TTPRILGKKRQTNLAQGPPGPGT*EKSRGV
Trigger: CACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCAGG...AGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGGGAGGAAAGAAGTTGTaGCTGACAGGCCCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVGGKKL*LTGPSS
Trigger: GGAGGAGGGGCCTGTCAGCCACAACTTCTTTCCTCC...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR TCA 90 bp GGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCATCTGCTTCACCTTGGCCTTaGACACCACCTGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GSGVEAEVAGHARVLWASASPWP*TPPGQS
Trigger: ACTTTGCCCAGGTGGTGTTCAAGGCCAAGGTGAAGC...AGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp GAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGCCCACACGAAGAGGATaGGGCCAAATACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: EVAGSGVEAEVAGHARVLPTRRG*GQIPGS
Trigger: GCTACCTGGTATTTGGCCTCATCCTCTTCGTGTGGG...CAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp GAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGCAAAGACCTGCCCATTaGGGATGTGGCTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: EVAGSGVEAEVAGHARVLQRPAH*GCGWCS
Trigger: TGAGCACCAGCCACATCCTCAATGGGCAGGTCTTTG...CAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCGAGAGGCAAAGACCTaGCCATTGAGGATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVREAKT*PLRMWL
Trigger: CAGCCACATCCTCAATGGGCAGGTCTTTGCCTCTCG...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp CACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCCGAGAGGCAAAGACCTaGCCATTGAGGATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HDPQDPGQEAADKLGTGAREAKT*PLRMWL
Trigger: CAGCCACATCCTCAATGGGCAGGTCTTTGCCTCTCG...GGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCCCTCATCTTCACAGTaGCCAGCCCGGTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVPSSSQ*PARSKK
Trigger: CTTCTTTGACCGGGCTGGGCACTGTGAAGATGAGGG...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp CACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCCCCTCATCTTCACAGTaGCCAGCCCGGTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: HDPQDPGQEAADKLGTGAPSSSQ*PARSKK
Trigger: CTTCTTTGACCGGGCTGGGCACTGTGAAGATGAGGG...GGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp GAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGCCCTCATCTTCACAGTaGCCAGCCCGGTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: EVAGSGVEAEVAGHARVLPSSSQ*PARSKK
Trigger: CTTCTTTGACCGGGCTGGGCACTGTGAAGATGAGGG...CAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp GTGGGGCGCAGACACTGTTTATTGAGTGGCAGGCACAGGAGAGGTAGCTGGCTCCAGGTCATGCCAGGGTaGTGTGGGCATCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VGRRHCLLSGRHRRGSWLQVMPG*CGHLAA
Trigger: GGCTGCCAGATGCCCACAGCACCCTGGCATGACCTG...GAGCCAGCTACCTCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGCGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp GGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGGTCCCAGAGCCTAGACTaGCCGACATACAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: GKKRQTNLAQGPRVRGTGSQSLD*PTYRSC
Trigger: ACAGGACCTGTATGTCGGGCAGTCTAGGCTCTGGGA...CCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536282.1
ENST00000539851.5
CDS-3UTR GCA 90 bp GAGACTGTGGTGGTGGCCGCCTGGTCCTGGCACCTGGGAGAAGAGCAGAGGAGTTCCCAGAGCCTAGACTaGCCGACATACAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: ETVVVAAWSWHLGEEQRSSQSLD*PTYRSC
Trigger: ACAGGACCTGTATGTCGGGCAGTCTAGGCTCTGGGA...ACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCAGGCGGCCACCACCACAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS-3UTR CCA 90 bp CCCATCCTAGGGGGACGGCACAAGCTCACTATGACAGGAGCAGCAAGGAGCCGGGGGGGATCACGTCTGTaGGGTGGAGTAGAGACTGTG +
Preference number: 4 (lower is better)
Translates to: PILGGRHKLTMTGAARSRGGSRL*GGVETV
Trigger: CACAGTCTCTACTCCACCCCACAGACGTGATCCCCC...CCGGCTCCTTGCTGCTCCTGTCATAGTGAGCTTGTGCCGTCCCCCTAGGATGGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCAGGGGGATCACGTCTGTaGGGTGGAGTAGAGACTGTG +
Preference number: 4 (lower is better)
Translates to: GVATTPRILGKKRQTNLAGGSRL*GGVETV
Trigger: CACAGTCTCTACTCCACCCCACAGACGTGATCCCCC...TGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp CTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTAAGGAGAGGACTCCCTaGCCTCGGTCGTTCATGTCG +
Preference number: 4 (lower is better)
Translates to: LGKKRQTNLAQGPRVRGTKERTP*PRSFMS
Trigger: CGACATGAACGACCGAGGCCAGGGAGTCCTCTCCTT...AGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR TCA 90 bp ACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTGCTTCACCTTGGCCTTaGACACCACCTGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TTPRILGKKRQTNLAQGPASPWP*TPPGQS
Trigger: ACTTTGCCCAGGTGGTGTTCAAGGCCAAGGTGAAGC...AGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp GGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACCCACACGAAGAGGATaGGGCCAAATACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GVATTPRILGKKRQTNLAPTRRG*GQIPGS
Trigger: GCTACCTGGTATTTGGCCTCATCCTCTTCGTGTGGG...TGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR TCA 90 bp CTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTCCCACACGAAGAGGATaGGGCCAAATACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LGKKRQTNLAQGPRVRGTPTRRG*GQIPGS
Trigger: GCTACCTGGTATTTGGCCTCATCCTCTTCGTGTGGG...AGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR TCA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGGCAGACACTGTTTATTaGGTGGCAGGCACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVADTVY*VAGTGE
Trigger: CTCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGC...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp AGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTCGAGAGGCAAAGACCTaGCCATTGAGGATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RGSWLRCGSRGGRSCQGAREAKT*PLRMWL
Trigger: CAGCCACATCCTCAATGGGCAGGTCTTTGCCTCTCG...AGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
CDS-3UTR GCA 90 bp CCCATCCTAGGGGGACGGCACAAGCTCACTATGACAGGAGCAGCAAGGAGCCGGTCCCAGAGCCTAGACTaGCCGACATACTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PILGGRHKLTMTGAARSRSQSLD*PTYWCS
Trigger: AGAGCACCAGTATGTCGGGCAGTCTAGGCTCTGGGA...CCGGCTCCTTGCTGCTCCTGTCATAGTGAGCTTGTGCCGTCCCCCTAGGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377702.8
ENST00000438980.7
CDS-3UTR CCA 90 bp GGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGTTCACCAGGTCCGCCTaGTCAGACACATTGTACCAG +
Preference number: 4 (lower is better)
Translates to: GSWLRCGSRGGRSCQGAVFTRSA*SDTLYQ
Trigger: CTGGTACAATGTGTCTGACCAGGCGGACCTGGTGAA...CACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCATCTATCACGTCTGTGGGGTaGAGTAGAGACTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GSGVEAEVAGHARVLWASITSVG*SRDCGG
Trigger: ACCACCACAGTCTCTACTCCACCCCACAGACGTGAT...AGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGGATCACGTCTGTGGGGTaGAGTAGAGACTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GKKRQTNLAQGPRVRGTGITSVG*SRDCGG
Trigger: ACCACCACAGTCTCTACTCCACCCCACAGACGTGAT...CCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR CCA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGATCACGTCTGTGGGGTaGAGTAGAGACTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVITSVG*SRDCGG
Trigger: ACCACCACAGTCTCTACTCCACCCCACAGACGTGAT...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GTGGGGCGCAGACACTGTTTATTGAGTGGCAGGCACAGGAGAGGTAGCTGGCTCCCTGGTCCTGGCACCTaGGAGAAGAGCAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: VGRRHCLLSGRHRRGSWLPGPGT*EKSRGV
Trigger: CACTCCTCTGCTCTTCTCCCAGGTGCCAGGACCAGG...GAGCCAGCTACCTCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGCGCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTCTCCAGGTTCCAAATaGGGACCCCAGAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: EVAGSGVEAEVAGHARVLSPGSK*GPQRIP
Trigger: AGGGATTCTCTGGGGTCCCCATTTGGAACCTGGAGA...CAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS-3UTR CCA 90 bp ACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTCTATCCCCACTTCACTaGGGGGAAACTAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TTPRILGKKRQTNLAQGPLSPLH*GETKAQ
Trigger: CTGGGCCTTAGTTTCCCCCCAGTGAAGTGGGGATAG...AGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS-3UTR TCA 90 bp CCCATCCTAGGGGGACGGCACAAGCTCACTATGACAGGAGCAGCAAGGAGCCGGGCAGACACTGTTTATTaGGTGGCAGGCACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PILGGRHKLTMTGAARSRADTVY*VAGTGE
Trigger: CTCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGC...CCGGCTCCTTGCTGCTCCTGTCATAGTGAGCTTGTGCCGTCCCCCTAGGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR GCA 90 bp GACCGAGAGGCAAAGACCTGCCCATTGAGGATGTGGCTGGTGCTCAGGTCCTGTGTCAAGGTGAAGAACTaGAGGCAGACGGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: DREAKTCPLRMWLVLRSCVKVKN*RQTGQQ
Trigger: CTGCTGCCCCGTCTGCCTGCAGTTCTTCACCTTGAC...ACAGGACCTGAGCACCAGCCACATCCTCAATGGGCAGGTCTTTGCCTCTCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR GCA 90 bp GGACCGAGAGGCAAAGACCTGCCCATTGAGGATGTGGCTGGTGCTCAGGTCCTGCCCTCATCTTCACAGTaGCCAGCCCGGTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GPRGKDLPIEDVAGAQVLPSSSQ*PARSKK
Trigger: CTTCTTTGACCGGGCTGGGCACTGTGAAGATGAGGG...CAGGACCTGAGCACCAGCCACATCCTCAATGGGCAGGTCTTTGCCTCTCGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR CCA 90 bp GGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCATCTATAAATACGGAGGGGTaGGAATTGCAGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GSGVEAEVAGHARVLWASINTEG*ELQGAE
Trigger: CTCTGCACCCTGCAATTCCCACCCCTCCGTATTTAT...AGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313074.7
ENST00000438980.7
CDS-3UTR CCA 90 bp AGGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTTTCACCAGGTCCGCCTaGTCAGACACATTGTACCAG +
Preference number: 4 (lower is better)
Translates to: RRGSWLRCGSRGGRSCQGFTRSA*SDTLYQ
Trigger: CTGGTACAATGTGTCTGACCAGGCGGACCTGGTGAA...ACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp AGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTTTCACCAGGTCCGCCTaGTCAGACACATTGTACCAG +
Preference number: 4 (lower is better)
Translates to: RGSWLRCGSRGGRSCQGAFTRSA*SDTLYQ
Trigger: CTGGTACAATGTGTCTGACCAGGCGGACCTGGTGAA...AGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp ACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTATCACGTCTGTGGGGTaGAGTAGAGACTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TTPRILGKKRQTNLAQGPITSVG*SRDCGG
Trigger: ACCACCACAGTCTCTACTCCACCCCACAGACGTGAT...AGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp GGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTATCACGTCTGTGGGGTaGAGTAGAGACTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GGGSHDPQDPGQEAADKLITSVG*SRDCGG
Trigger: ACCACCACAGTCTCTACTCCACCCCACAGACGTGAT...AAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CCA 90 bp ACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTCCTCACTCAGGGGCATaGAAGGGCAGTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: TTPRILGKKRQTNLAQGPPHSGA*KGSLFS
Trigger: AGAAAAGAGACTGCCCTTCCATGCCCCTGAGTGAGG...AGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR TCA 90 bp GTGCTCCCAGGAGCAGCCCTCATCTTCACAGTGCCCAGCCCGGTCAAAGAAGTACCCACACGAAGAGGATaGGGCCAAATACCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: VLPGAALIFTVPSPVKEVPTRRG*GQIPGS
Trigger: GCTACCTGGTATTTGGCCTCATCCTCTTCGTGTGGG...TACTTCTTTGACCGGGCTGGGCACTGTGAAGATGAGGGCTGCTCCTGGGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR TCA 90 bp GTGCCCAGCCCGGTCAAAGAAGTAGGACCGAGAGGCAAAGACCTGCCCATTGAGCAAAGACCTGCCCATTaGGGATGTGGCTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: VPSPVKEVGPRGKDLPIEQRPAH*GCGWCS
Trigger: TGAGCACCAGCCACATCCTCAATGGGCAGGTCTTTG...CTCAATGGGCAGGTCTTTGCCTCTCGGTCCTACTTCTTTGACCGGGCTGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR CCA 90 bp AGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGATAAATACGGAGGGGTaGGAATTGCAGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SHDPQDPGQEAADKLGTGINTEG*ELQGAE
Trigger: CTCTGCACCCTGCAATTCCCACCCCTCCGTATTTAT...CCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR CCA 90 bp AGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGACTTGTTGGCAGAAGTaGGTCTCCAGGTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: SHDPQDPGQEAADKLGTGTCWQK*VSRFQM
Trigger: CATTTGGAACCTGGAGACCCACTTCTGCCAACAAGT...CCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS CCA 90 bp CGCGGGAGGTGTCCCCCGAGGCGGGCGGCGCGAAGCTTCCGCGCCTaGGAGGAGGAGCGGGGAGCGGGACTTTCCGACCGGGCACCCAGT +
Preference number: 5 (lower is better)
Translates to: RGRCPPRRAARSFRA*EEERGAGLSDRAPS
Trigger: ACTGGGTGCCCGGTCGGAAAGTCCCGCTCCCCGCTCCTCCTCCCAGGCGCGGAAGCTTCGCGCCGCCCGCCTCGGGGGACACCTCCCGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536667.5
ENST00000539833.5
ENST00000539851.5
CDS TCA 90 bp GGCCTCGGTCGTTCATGTCGTCCTGGGTGGAGGGGGAGAGCCGGCTaGTACCCGTCGGGTCAGGGCAGCGGCCGCTGCGAGGGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: GLGRSCRPGWRGRAG*YPSGQGSGRCEGRP
Trigger: TGGGCGCCCCTCGCAGCGGCCGCTGCCCTGACCCGACGGGTATCAGCCGGCTCTCCCCCTCCACCCAGGACGACATGAACGACCGAGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR CAA 90 bp GCAGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGGGCCCCAGGCGGTaGGCGCGGGGAGTATCTCGG +
Preference number: 5 (lower is better)
Translates to: AARSRPEEGVATTPRILGKGPRR*ARGVSR
Trigger: CCGAGATACTCCCCGCGCCAACCGCCTGGGGCCCTT...GCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS GCA 90 bp GGCAGCCATCCCAGCCAGGGAGGAGGTTCCTTTCCTTATCTCCAGTaGCCCCGAGATGGCGCGGGAGGTGTCCCCCGAGGCGGGCGGCGC +
Preference number: 5 (lower is better)
Translates to: GSHPSQGGGSFPYLQ*PRDGAGGVPRGGRR
Trigger: GCGCCGCCCGCCTCGGGGGACACCTCCCGCGCCATCTCGGGGGCACTGGAGATAAGGAAAGGAACCTCCTCCCTGGCTGGGATGGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536667.5
ENST00000539833.5
CDS-3UTR CAA 90 bp CCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAAAGGGCCCCAGGCGGTaGGCGCGGGGAGTATCTCGG +
Preference number: 5 (lower is better)
Translates to: PARGGGSHDPQDPGQEAAKGPRR*ARGVSR
Trigger: CCGAGATACTCCCCGCGCCAACCGCCTGGGGCCCTT...TGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS GCA 90 bp CCGCCAGTTCCCACGCTCCTCTCTCCTATACCCAAATCGGGGTCGTaGCGCCCGGCCGGGGGCGGCAACGGATTCCCGTCCCTCGGTCTC +
Preference number: 5 (lower is better)
Translates to: PPVPTLLSPIPKSGS*RPAGGGNGFPSLGL
Trigger: GAGACCGAGGGACGGGAATCCGTTGCCGCCCCCGGCCGGGCGGCACGACCCCGATTTGGGTATAGGAGAGAGGAGCGTGGGAACTGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535675.5
CDS-3UTR CAA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCAAAGGGCCCCAGGCGGTaGGCGCGGGGAGTATCTCGG +
Preference number: 5 (lower is better)
Translates to: AGSGVEAEVAGHARVLWAKGPRR*ARGVSR
Trigger: CCGAGATACTCCCCGCGCCAACCGCCTGGGGCCCTT...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS CCA 90 bp ATACAGGGTGGTGTAGGCAGCTGTCAGCCCCAGGGTCACAGCAGGTaGCAGCGCAGGCACCAGCCCGGCAGCAGGCACCAGGCCAGACAG +
Preference number: 5 (lower is better)
Translates to: IQGGVGSCQPQGHSR*QRRHQPGSRHQARQ
Trigger: CTGTCTGGCCTGGTGCCTGCTGCCGGGCTGGTGCCTGCGCTGCCACCTGCTGTGACCCTGGGGCTGACAGCTGCCTACACCACCCTGTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000411458.5
ENST00000438980.7
ENST00000535675.5
ENST00000536017.1
ENST00000538032.5
ENST00000538244.1
ENST00000539833.5
ENST00000539851.5
ENST00000540370.1
ENST00000541952.1
ENST00000542190.5
ENST00000543383.5
ENST00000546139.5
ENST00000546201.5
CDS CCA 90 bp AGGCCCAAGGAGAGGACTCCCTGGCCTCGGTCGTTCATGTCGTCCTaGGTGGAGGGGGAGAGCCGGCTGATACCCGTCGGGTCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RPKERTPWPRSFMSS*VEGESRLIPVGSGQ
Trigger: CTGCCCTGACCCGACGGGTATCAGCCGGCTCTCCCCCTCCACCCAGGACGACATGAACGACCGAGGCCAGGGAGTCCTCTCCTTGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000536017.1
CDS-3UTR CAA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGAAGGGCCCCAGGCGGTaGGCGCGGGGAGTATCTCGG +
Preference number: 5 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVKGPRR*ARGVSR
Trigger: CCGAGATACTCCCCGCGCCAACCGCCTGGGGCCCTT...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CAA 90 bp CCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGGCCGACGCTTCACCTaGGCCTTGAACACCACCTGG +
Preference number: 5 (lower is better)
Translates to: PARGGGSHDPQDPGQEAAGRRFT*ALNTTW
Trigger: CCAGGTGGTGTTCAAGGCCAAGGTGAAGCGTCGGCC...TGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CAA 90 bp GGCTGGTGCTCAGGTCCTGTGGGGGCCGGTGCACCCGGAAGAAGCCCACCAGCAGGCCGACGCTTCACCTaGGCCTTGAACACCACCTGG +
Preference number: 5 (lower is better)
Translates to: GWCSGPVGAGAPGRSPPAGRRFT*ALNTTW
Trigger: CCAGGTGGTGTTCAAGGCCAAGGTGAAGCGTCGGCC...TGCTGGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGACCTGAGCACCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS TCA 90 bp AGGGAGGCCCGAGTGACGTTCCGAGAGGTGATTGGGCCAGGTCGCTaGCAGTTCCCGTTGCCCAAGCAACTAGGGCCCGGAGCCCGGGGT +
Preference number: 5 (lower is better)
Translates to: REARVTFREVIGPGR*QFPLPKQLGPGARG
Trigger: ACCCCGGGCTCCGGGCCCTAGTTGCTTGGGCAACGGGAACTGTCAGCGACCTGGCCCAATCACCTCTCGGAACGTCACTCGGGCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411458.5
CDS-3UTR CAA 90 bp GCAGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCCGCTTCACCTTGGCCTaGAACACCACCTGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: AARSRPEEGVATTPRILGRFTLA*NTTWAK
Trigger: CTTTGCCCAGGTGGTGTTCAAGGCCAAGGTGAAGCG...GCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS TCA 90 bp TGGTGGGATCGGAACTTGGGCAGGGGAAGCTCCGCCCCCTCCCAGTaGCCTTCGCTCCACATCCCGAAACTCCACCCGTTCCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: WWDRNLGRGSSAPSQ*PSLHIPKLHPFPLP
Trigger: GGGCAGTGGGAACGGGTGGAGTTTCGGGATGTGGAGCGAAGGTCACTGGGAGGGGGCGGAGCTTCCCCTGCCCAAGTTCCGATCCCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS TCA 90 bp ACCAGTTCCCATTCCTGGGGGCCCATGCGTCCTCGCGAGCGTCCCTaGCCGCCCGGCGTGGAGCCTCCTGGGAGTTGTGGCCTTCATTAT +
Preference number: 5 (lower is better)
Translates to: TSSHSWGPMRPRERP*PPGVEPPGSCGLHY
Trigger: ATAATGAAGGCCACAACTCCCAGGAGGCTCCACGCCGGGCGGTCAGGGACGCTCGCGAGGACGCATGGGCCCCCAGGAATGGGAACTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS CCA 90 bp ACGCAGATGCGGCAAAGCTCCAGCTGGACGCGAGTCTTCCAGTCCTaGTGGGATCGGAACTTGGGCAGGGGAAGCTCCGCCCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: TQMRQSSSWTRVFQS*WDRNLGRGSSAPSQ
Trigger: CTGGGAGGGGGCGGAGCTTCCCCTGCCCAAGTTCCGATCCCACCAGGACTGGAAGACTCGCGTCCAGCTGGAGCTTTGCCGCATCTGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS-3UTR CAA 90 bp AAGAAGCCCACCAGCAGGGTGGTGGGCAGTAGCTCCCACACGAAGAGGATGAGGAAGGGCCCCAGGCGGTaGGCGCGGGGAGTATCTCGG +
Preference number: 5 (lower is better)
Translates to: KKPTSRVVGSSSHTKRMRKGPRR*ARGVSR
Trigger: CCGAGATACTCCCCGCGCCAACCGCCTGGGGCCCTT...CCTCATCCTCTTCGTGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR CAA 90 bp GCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGCGCTTCACCTTGGCCTaGAACACCACCTGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: ARSRPEEGVATTPRILGKRFTLA*NTTWAK
Trigger: CTTTGCCCAGGTGGTGTTCAAGGCCAAGGTGAAGCG...CTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CAA 90 bp AGCAAGGAGCCGGCCAGAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAAAGCGGCAGACAAACTaGGCACAGGGGCCTAGGGTG +
Preference number: 5 (lower is better)
Translates to: SKEPARGGGSHDPQDPGQKRQTN*AQGPRV
Trigger: CACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTT...TTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTCTGGCCGGCTCCTTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS TCA 90 bp GGCACCAGGCCAGACAGGTTACTCTCCATGTCAGGGAGGGAGGCCTaGATCCCGGAGACAGACAAGGAGGGACTGTCGGCGGGACCAGGG +
Preference number: 5 (lower is better)
Translates to: GTRPDRLLSMSGREA*IPETDKEGLSAGPG
Trigger: CCCTGGTCCCGCCGACAGTCCCTCCTTGTCTGTCTCCGGGATTCAGGCCTCCCTCCCTGACATGGAGAGTAACCTGTCTGGCCTGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313074.7
ENST00000438980.7
ENST00000536017.1
CDS GCA 90 bp AGAAGGGACTTCCTCGCCCGAAGAGCGCGGGCACAGCAACGCAGATaGGGCAAAGCTCCAGCTGGACGCGAGTCTTCCAGTCCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: RRDFLARRARAQQRR*GKAPAGRESSSPGG
Trigger: CCCACCAGGACTGGAAGACTCGCGTCCAGCTGGAGCTTTGCCGCATCTGCGTTGCTGTGCCCGCGCTCTTCGGGCGAGGAAGTCCCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS-3UTR CAA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGGAGAGACCCTTGCCCTaGGGGAACACAGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVERPLP*GNTGSL
Trigger: CAGGCTGCCTGTGTTCCCCAAGGGCAAGGGTCTCTC...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS CCA 90 bp CTCCATGTCAGGGAGGGAGGCCCGAGTGACGTTCCGAGAGGTGATTaGGCCAGGTCGCTGACAGTTCCCGTTGCCCAAGCAACTAGGGCC +
Preference number: 5 (lower is better)
Translates to: LHVREGGPSDVPRGD*ARSLTVPVAQATRA
Trigger: GGCCCTAGTTGCTTGGGCAACGGGAACTGTCAGCGACCTGGCCCAATCACCTCTCGGAACGTCACTCGGGCCTCCCTCCCTGACATGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411458.5
CDS-3UTR CAA 90 bp AGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCCGCTTCACCTTGGCCTaGAACACCACCTGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SWLRCGSRGGRSCQGAVGRFTLA*NTTWAK
Trigger: CTTTGCCCAGGTGGTGTTCAAGGCCAAGGTGAAGCG...GCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CAA 90 bp AGGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGGCCGACGCTTCACCTaGGCCTTGAACACCACCTGG +
Preference number: 5 (lower is better)
Translates to: RRGSWLRCGSRGGRSCQGGRRFT*ALNTTW
Trigger: CCAGGTGGTGTTCAAGGCCAAGGTGAAGCGTCGGCC...ACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CAA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGAAGCGGCAGACAAACTaGGCACAGGGGCCTAGGGTG +
Preference number: 5 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVKRQTN*AQGPRV
Trigger: CACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTT...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CAA 90 bp GGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCATCTAAGCGGCAGACAAACTaGGCACAGGGGCCTAGGGTG +
Preference number: 5 (lower is better)
Translates to: GSGVEAEVAGHARVLWASKRQTN*AQGPRV
Trigger: CACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTT...AGATGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CAA 90 bp GGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTGGGAAGCGGCAGACAAACTaGGCACAGGGGCCTAGGGTG +
Preference number: 5 (lower is better)
Translates to: GKKRQTNLAQGPRVRGTGKRQTN*AQGPRV
Trigger: CACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTT...CCCAGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR CAA 90 bp GCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCAGGGCTGAAGGACTTGTaGGCAGAAGTGGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: AGSGVEAEVAGHARVLWAGLKDL*AEVGLQ
Trigger: CTGGAGACCCACTTCTGCCAACAAGTCCTTCAGCCC...TGCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS-3UTR CAA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGACGGCTGAGCTTCAGTaGTGGCTGTGCCAAGCGCCT +
Preference number: 5 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVTAELQ*WLCQAP
Trigger: AGGCGCTTGGCACAGCCACAACTGAAGCTCAGCCGT...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS CCA 90 bp GGGCCCAGGCCAGCTGGGGCCAAGGTGCCACGGCTACTAAGGAGGTaGCAGACATGCGTATGCCCACCTGGTCAGACACATTGTACCAGT +
Preference number: 5 (lower is better)
Translates to: GPRPAGAKVPRLLRR*QTCVCPPGQTHCTS
Trigger: ACTGGTACAATGTGTCTGACCAGGTGGGCATACGCATGTCTGCCACCTCCTTAGTAGCCGTGGCACCTTGGCCCCAGCTGGCCTGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545366.1
CDS-3UTR CAA 90 bp CTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGAGGGGGACTAAGCGGCAGACAAACTaGGCACAGGGGCCTAGGGTG +
Preference number: 5 (lower is better)
Translates to: LGKKRQTNLAQGPRVRGTKRQTN*AQGPRV
Trigger: CACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTT...AGTCCCCCTCACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000536282.1
ENST00000539851.5
CDS-3UTR CAA 90 bp CCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCTCAACAGAGAGACCCTaGCCCTTGGGGAACACAGGC +
Preference number: 5 (lower is better)
Translates to: PRPPGSWARSGRQTWHRGSTERP*PLGNTG
Trigger: GCCTGTGTTCCCCAAGGGCAAGGGTCTCTCTGTTGA...GCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS-3UTR CAA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGTCAGGAGGAAAGAAGTaGTGGCTGACAGGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVSGGKK*WLTGPS
Trigger: GGAGGGGCCTGTCAGCCACAACTTCTTTCCTCCTGA...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS CCA 90 bp CAGGGTGCAGAGAGGGAGATGGGGCGCTCAGGAGGAAAGAAGTTGTaGCTGACAGGCCCCTCCTCCTCAACAGAGAGACCCTTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: QGAEREMGRSGGKKL*LTGPSSSTERPLPL
Trigger: CAAGGGCAAGGGTCTCTCTGTTGAGGAGGAGGGGCCTGTCAGCCACAACTTCTTTCCTCCTGAGCGCCCCATCTCCCTCTCTGCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000536017.1
CDS-3UTR CAA 90 bp GGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTCGCTTCACCTTGGCCTaGAACACCACCTGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GGGSHDPQDPGQEAADKLRFTLA*NTTWAK
Trigger: CTTTGCCCAGGTGGTGTTCAAGGCCAAGGTGAAGCG...AAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CAA 90 bp CGGAAGAAGCCCACCAGCAGGGTGGTGGGCAGTAGCTCCCACACGAAGAGGATGCGCTTCACCTTGGCCTaGAACACCACCTGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: RKKPTSRVVGSSSHTKRMRFTLA*NTTWAK
Trigger: CTTTGCCCAGGTGGTGTTCAAGGCCAAGGTGAAGCG...CATCCTCTTCGTGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCTTCTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546201.5
CDS-3UTR CAA 90 bp GTGGGGCGCAGACACTGTTTATTGAGTGGCAGGCACAGGAGAGGTAGCTGGCTCGGCCGACGCTTCACCTaGGCCTTGAACACCACCTGG +
Preference number: 5 (lower is better)
Translates to: VGRRHCLLSGRHRRGSWLGRRFT*ALNTTW
Trigger: CCAGGTGGTGTTCAAGGCCAAGGTGAAGCGTCGGCC...GAGCCAGCTACCTCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGCGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CAA 90 bp AGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCTGTGGGCCGCAGACACTGTTTATaGAGTGGCAGGCACAGGAGA +
Preference number: 5 (lower is better)
Translates to: SWLRCGSRGGRSCQGAVGRRHCL*SGRHRR
Trigger: TCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGCG...GCCCACAGCACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CAA 90 bp GGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGAGGGGCTGAAGGACTaGTTGGCAGAAGTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: GGGSHDPQDPGQEAADKLEGLKD*LAEVGL
Trigger: GAGACCCACTTCTGCCAACAAGTCCTTCAGCCCCTC...AAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS-3UTR CAA 90 bp GGAGAGGTAGCTGGCTCCGGTGTGGAAGCAGAGGTGGCAGGTCATGCCAGGGTGCGCAGACACTGTTTATaGAGTGGCAGGCACAGGAGA +
Preference number: 5 (lower is better)
Translates to: GEVAGSGVEAEVAGHARVRRHCL*SGRHRR
Trigger: TCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGCG...CACCCTGGCATGACCTGCCACCTCTGCTTCCACACCGGAGCCAGCTACCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CAA 90 bp GAGGAGGGGGTAGCCACGACCCCCAGGATCCTGGGCAAGAAGCGGCAGACAAACCGCAGACACTGTTTATaGAGTGGCAGGCACAGGAGA +
Preference number: 5 (lower is better)
Translates to: EEGVATTPRILGKKRQTNRRHCL*SGRHRR
Trigger: TCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGCG...GTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGGGGTCGTGGCTACCCCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS-3UTR CAA 90 bp CCCAGGATCCTGGGCAAGAAGCGGCAGACAAACTTGGCACAGGGGCCTAGGGTGCGCAGACACTGTTTATaGAGTGGCAGGCACAGGAGA +
Preference number: 5 (lower is better)
Translates to: PRILGKKRQTNLAQGPRVRRHCL*SGRHRR
Trigger: TCTCCTGTGCCTGCCACTCAATAAACAGTGTCTGCG...CACCCTAGGCCCCTGTGCCAAGTTTGTCTGCCGCTTCTTGCCCAGGATCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377702.8
ENST00000438980.7
ENST00000539851.5
CDS TCA 90 bp AGCCCACCAGCAGGGTGGTGGGCAGTAGCTCCCACACGAAGAGGATaGGGCCAAATACCAGGTAGCCTTTGTTCCCCAGGTCATTCACCA +
Preference number: 5 (lower is better)
Translates to: SPPAGWWAVAPTRRG*GQIPGSLCSPGHSP
Trigger: TGGTGAATGACCTGGGGAACAAAGGCTACCTGGTATTTGGCCTCATCCTCTTCGTGTGGGAGCTACTGCCCACCACCCTGCTGGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000411458.5
ENST00000438980.7
ENST00000539851.5
ENST00000545366.1
ENST00000546201.5
CDS TCA 90 bp CCAGGCGGAGCGGTAACAATAGCAACAATAATCACATCCGACGGCTaGGCTTCAGTTGTGGCTGTGCCAAGCGCCTTCGCCCGCAGTAAT +
Preference number: 5 (lower is better)
Translates to: PGGAVTIATIITSDG*ASVVAVPSAFARSN
Trigger: ATTACTGCGGGCGAAGGCGCTTGGCACAGCCACAACTGAAGCTCAGCCGTCGGATGTGATTATTGTTGCTATTGTTACCGCTCCGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536667.5
ENST00000539833.5
ENST00000539851.5
CDS TCA 90 bp ACATCCCGAAACTCCACCCGTTCCCACTGCCCTGGGCAGCCATCTTaGATATGGGCGGAAGTACTTCCCTCAGGCCTATGCAAAAAGAGG +
Preference number: 5 (lower is better)
Translates to: TSRNSTRSHCPGQPS*IWAEVLPSGLCKKR
Trigger: CCTCTTTTTGCATAGGCCTGAGGGAAGTACTTCCGCCCATATTCAAGATGGCTGCCCAGGGCAGTGGGAACGGGTGGAGTTTCGGGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS CCA 72 bp TGTCCCCCGAGGCGGGCGGCGCGAAGCTTCCGCGCCTaGGAGGAGGAGCGGGGAGCGGGACTTTCCGACCGG +
Preference number: 6 (lower is better)
Translates to: CPPRRAARSFRA*EEERGAGLSDR
Trigger: CCGGTCGGAAAGTCCCGCTCCCCGCTCCTCCTCCCAGGCGCGGAAGCTTCGCGCCGCCCGCCTCGGGGGACA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536667.5
ENST00000539833.5
ENST00000539851.5
CDS CCA 72 bp TCAGGGAGGGAGGCCTTATCTCCAGTGCCCCCGAGATaGCGCGGGAGGTGTCCCCCGAGGCGGGCGGCGCGA +
Preference number: 6 (lower is better)
Translates to: SGREALSPVPPR*RGRCPPRRAAR
Trigger: TCGCGCCGCCCGCCTCGGGGGACACCTCCCGCGCCATCTCGGGGGCACTGGAGATAAGGCCTCCCTCCCTGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539851.5
CDS TCA 72 bp CGTTCATGTCGTCCTGGGTGGAGGGGGAGAGCCGGCTaGTACCCGTCGGGTCAGGGCAGCGGCCGCTGCGAG +
Preference number: 6 (lower is better)
Translates to: RSCRPGWRGRAG*YPSGQGSGRCE
Trigger: CTCGCAGCGGCCGCTGCCCTGACCCGACGGGTATCAGCCGGCTCTCCCCCTCCACCCAGGACGACATGAACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438980.7
CDS GCA 72 bp CCCACGCTCCTCTCTCCTATACCCAAATCGGGGTCGTaGCGCCCGGCCGGGGGCGGCAACGGATTCCCGTCC +
Preference number: 6 (lower is better)
Translates to: PTLLSPIPKSGS*RPAGGGNGFPS
Trigger: GGACGGGAATCCGTTGCCGCCCCCGGCCGGGCGGCACGACCCCGATTTGGGTATAGGAGAGAGGAGCGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535675.5
CDS CCA 72 bp GGTTGTAGCAGGCCCGGCTGGCATAGAGCAGGACCATaGCGCCACCCATCGCGGCCGCCTGGCACACACTGG +
Preference number: 6 (lower is better)
Translates to: GCSRPGWHRAGP*RHPSRPPGTHW
Trigger: CCAGTGTGTGCCAGGCGGCCGCGATGGGTGGCGCCATGGTCCTGCTCTATGCCAGCCGGGCCTGCTACAACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313074.7
ENST00000411458.5
ENST00000438980.7
ENST00000539851.5
ENST00000543383.5
CDS GCA 72 bp CTAGACTGCCCGACATACAGGTCCTGTGGGGGCCGGTaGACCCGGAAGAAGCCCACCAGCAGGGTGGTGGGC +
Preference number: 6 (lower is better)
Translates to: LDCPTYRSCGGR*TRKKPTSRVVG
Trigger: GCCCACCACCCTGCTGGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAGGACCTGTATGTCGGGCAGTCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536282.1
ENST00000539851.5
CDS GCA 72 bp CCCAGCCAGGGAGGAGGTTCCTTTCCTTATCTCCAGTaGCCCCGAGATGGCGCGGGAGGTGTCCCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: PSQGGGSFPYLQ*PRDGAGGVPRG
Trigger: GCCTCGGGGGACACCTCCCGCGCCATCTCGGGGGCACTGGAGATAAGGAAAGGAACCTCCTCCCTGGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536667.5
ENST00000539833.5
CDS CCA 72 bp GAGAGGACTCCCTGGCCTCGGTCGTTCATGTCGTCCTaGGTGGAGGGGGAGAGCCGGCTGATACCCGTCGGG +
Preference number: 6 (lower is better)
Translates to: ERTPWPRSFMSS*VEGESRLIPVG
Trigger: CCCGACGGGTATCAGCCGGCTCTCCCCCTCCACCCAGGACGACATGAACGACCGAGGCCAGGGAGTCCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000536017.1
CDS GCA 72 bp GCCTGGTCCTGGCACCTGGTGCTCTCACCCCGGCTGTaGTCCCAGGAGCAGCCCTCATCTTCACAGTGCCCA +
Preference number: 6 (lower is better)
Translates to: AWSWHLVLSPRL*SQEQPSSSQCP
Trigger: TGGGCACTGTGAAGATGAGGGCTGCTCCTGGGAGCACAGCCGGGGTGAGAGCACCAGGTGCCAGGACCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313074.7
ENST00000411458.5
CDS CCA 72 bp CCATGCGTCCTCGCGAGCGTCCCTGACCGCCCGGCGTaGAGCCTCCTGGGAGTTGTGGCCTTCATTATCTCC +
Preference number: 6 (lower is better)
Translates to: PCVLASVPDRPA*SLLGVVAFIIS
Trigger: GGAGATAATGAAGGCCACAACTCCCAGGAGGCTCCACGCCGGGCGGTCAGGGACGCTCGCGAGGACGCATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS CCA 72 bp CAAAGCTCCAGCTGGACGCGAGTCTTCCAGTCCTGGTaGGATCGGAACTTGGGCAGGGGAAGCTCCGCCCCC +
Preference number: 6 (lower is better)
Translates to: QSSSWTRVFQSW*DRNLGRGSSAP
Trigger: GGGGGCGGAGCTTCCCCTGCCCAAGTTCCGATCCCACCAGGACTGGAAGACTCGCGTCCAGCTGGAGCTTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS CCA 72 bp CGGCAAAGCTCCAGCTGGACGCGAGTCTTCCAGTCCTaGTGGGATCGGAACTTGGGCAGGGGAAGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: RQSSSWTRVFQS*WDRNLGRGSSA
Trigger: GGCGGAGCTTCCCCTGCCCAAGTTCCGATCCCACCAGGACTGGAAGACTCGCGTCCAGCTGGAGCTTTGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS TCA 72 bp CGAGGCAGAGGCAGGCAGCAAGAGACAGCGCGCAGATaGCGAACAGGGAGTCGCTCACCAGGACGCGGACAA +
Preference number: 6 (lower is better)
Translates to: RGRGRQQETARR*RTGSRSPGRGQ
Trigger: TTGTCCGCGTCCTGGTGAGCGACTCCCTGTTCGTCATCTGCGCGCTGTCTCTTGCTGCCTGCCTCTGCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313074.7
ENST00000377702.8
ENST00000411458.5
ENST00000438980.7
ENST00000536017.1
ENST00000539833.5
ENST00000539851.5
ENST00000543383.5
ENST00000546139.5
CDS GCA 72 bp TTCCTCGCCCGAAGAGCGCGGGCACAGCAACGCAGATaGGGCAAAGCTCCAGCTGGACGCGAGTCTTCCAGT +
Preference number: 6 (lower is better)
Translates to: FLARRARAQQRR*GKAPAGRESSS
Trigger: ACTGGAAGACTCGCGTCCAGCTGGAGCTTTGCCGCATCTGCGTTGCTGTGCCCGCGCTCTTCGGGCGAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS CCA 72 bp CGGAGCCCGGGGTGCTCTGCCTTCCAGGGCCACCGTTaGCCCCAGCTGTGCCTTGACTACGTAACATCTTGT +
Preference number: 6 (lower is better)
Translates to: RSPGCSAFQGHR*PQLCLDYVTSC
Trigger: ACAAGATGTTACGTAGTCAAGGCACAGCTGGGGCCAACGGTGGCCCTGGAAGGCAGAGCACCCCGGGCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411458.5
CDS CCA 72 bp AGGGAGGGAGGCCCGAGTGACGTTCCGAGAGGTGATTaGGCCAGGTCGCTGACAGTTCCCGTTGCCCAAGCA +
Preference number: 6 (lower is better)
Translates to: REGGPSDVPRGD*ARSLTVPVAQA
Trigger: TGCTTGGGCAACGGGAACTGTCAGCGACCTGGCCCAATCACCTCTCGGAACGTCACTCGGGCCTCCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411458.5
CDS CCA 72 bp GCGGGCACAGCAACGCAGATGCGGCAAAGCTCCAGCTaGACGCGAGTCTTCCAGTCCTGGTGGGATCGGAAC +
Preference number: 6 (lower is better)
Translates to: AGTATQMRQSSS*TRVFQSWWDRN
Trigger: GTTCCGATCCCACCAGGACTGGAAGACTCGCGTCCAGCTGGAGCTTTGCCGCATCTGCGTTGCTGTGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS TCA 72 bp CGAGTGACGTTCCGAGAGGTGATTGGGCCAGGTCGCTaGCAGTTCCCGTTGCCCAAGCAACTAGGGCCCGGA +
Preference number: 6 (lower is better)
Translates to: RVTFREVIGPGR*QFPLPKQLGPG
Trigger: TCCGGGCCCTAGTTGCTTGGGCAACGGGAACTGTCAGCGACCTGGCCCAATCACCTCTCGGAACGTCACTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411458.5
CDS GCA 72 bp AGACTGCCCGACATACTGGTGCTCTCACCCCGGCTGTaGTCCCAGGAGCAGCCCTCATCTTCACAGTGCCCA +
Preference number: 6 (lower is better)
Translates to: RLPDILVLSPRL*SQEQPSSSQCP
Trigger: TGGGCACTGTGAAGATGAGGGCTGCTCCTGGGAGCACAGCCGGGGTGAGAGCACCAGTATGTCGGGCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377702.8
ENST00000438980.7
CDS CCA 72 bp GAGAGGGAGATGGGGCGCTCAGGAGGAAAGAAGTTGTaGCTGACAGGCCCCTCCTCCTCAACAGAGAGACCC +
Preference number: 6 (lower is better)
Translates to: EREMGRSGGKKL*LTGPSSSTERP
Trigger: GGGTCTCTCTGTTGAGGAGGAGGGGCCTGTCAGCCACAACTTCTTTCCTCCTGAGCGCCCCATCTCCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000536017.1
CDS CCA 72 bp CCAGCTGGGGCCAAGGTGCCACGGCTACTAAGGAGGTaGCAGACATGCGTATGCCCACCTGGTCAGACACAT +
Preference number: 6 (lower is better)
Translates to: PAGAKVPRLLRR*QTCVCPPGQTH
Trigger: ATGTGTCTGACCAGGTGGGCATACGCATGTCTGCCACCTCCTTAGTAGCCGTGGCACCTTGGCCCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545366.1
CDS CAA 90 bp GGGACTGTCGGCGGGACCAGGGAAATAAATACGGAGGGGTGGGAATaGCAGGGTGCAGAGAGGGAGATGGGGCGCTCAGGAGGAAAGAAG +
Preference number: 6 (lower is better)
Translates to: GTVGGTREINTEGWE*QGAEREMGRSGGKK
Trigger: CTTCTTTCCTCCTGAGCGCCCCATCTCCCTCTCTGCACCCTGCAATTCCCACCCCTCCGTATTTATTTCCCTGGTCCCGCCGACAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000536017.1
CDS CAA 72 bp GCAGAGAGGGAGATGGGGCGCTCAGGAGGAAAGAAGTaGTGGCTGACAGGCCCCTCCTCCTCAACAGAGAGA +
Preference number: 6 (lower is better)
Translates to: AEREMGRSGGKK*WLTGPSSSTER
Trigger: TCTCTCTGTTGAGGAGGAGGGGCCTGTCAGCCACAACTTCTTTCCTCCTGAGCGCCCCATCTCCCTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438980.7
ENST00000536017.1
CDS CAA 90 bp ATGTCAGGGAGGGAGGCCATCGCTCCCGGCCCTTTGATTCTCGAATaGCGGTCTCATCTTCTGGGTGCTAGGTCTCCAGCTCTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: MSGREAIAPGPLILE*RSHLLGARSPALAF
Trigger: AAAGGCCAGAGCTGGAGACCTAGCACCCAGAAGATGAGACCGCAATTCGAGAATCAAAGGGCCGGGAGCGATGGCCTCCCTCCCTGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS TCA 72 bp CCATGTCAGGGAGGGAGGCCATCGCTCCCGGCCCTTTaGTTCTCGAATTGCGGTCTCATCTTCTGGGTGCTA +
Preference number: 6 (lower is better)
Translates to: PCQGGRPSLPAL*FSNCGLIFWVL
Trigger: TAGCACCCAGAAGATGAGACCGCAATTCGAGAATCAAAGGGCCGGGAGCGATGGCCTCCCTCCCTGACATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS CAA 72 bp AGGGAGGCCATCGCTCCCGGCCCTTTGATTCTCGAATaGCGGTCTCATCTTCTGGGTGCTAGGTCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: REAIAPGPLILE*RSHLLGARSPA
Trigger: AGCTGGAGACCTAGCACCCAGAAGATGAGACCGCAATTCGAGAATCAAAGGGCCGGGAGCGATGGCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS CAA 72 bp TCCATGTCAGGGAGGGAGGCCATCGCTCCCGGCCCTTaGATTCTCGAATTGCGGTCTCATCTTCTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: SMSGREAIAPGP*ILELRSHLLGA
Trigger: AGCACCCAGAAGATGAGACCGCAATTCGAGAATCAAAGGGCCGGGAGCGATGGCCTCCCTCCCTGACATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546139.5
CDS GCA 72 bp GCCAAGGTGCCACGGCTACTAAGGAGGTGGCAGACATaGGTATGCCCACCTGGTCAGACACATTGTACCAGT +
Preference number: 6 (lower is better)
Translates to: AKVPRLLRRWQT*VCPPGQTHCTS
Trigger: ACTGGTACAATGTGTCTGACCAGGTGGGCATACGCATGTCTGCCACCTCCTTAGTAGCCGTGGCACCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545366.1
CDS TCA 72 bp GCGGTAACAATAGCAACAATAATCACATCCGACGGCTaGGCTTCAGTTGTGGCTGTGCCAAGCGCCTTCGCC +
Preference number: 6 (lower is better)
Translates to: AVTIATIITSDG*ASVVAVPSAFA
Trigger: GGCGAAGGCGCTTGGCACAGCCACAACTGAAGCTCAGCCGTCGGATGTGATTATTGTTGCTATTGTTACCGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536667.5
ENST00000539833.5
ENST00000539851.5
CDS GCA 72 bp AGGAAGGCTCACGGAAGTGGAGAGCCTGGCTCGAGCTaGCATGGTAATCTAACTCATGTAACCCTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: RKAHGSGEPGSS*HGNLTHVTLFS
Trigger: GGAGAAAAGGGTTACATGAGTTAGATTACCATGGCAGCTCGAGCCAGGCTCTCCACTTCCGTGAGCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546139.5