RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000142751

Ensembl transcript IDs: ENST00000374133.3, ENST00000374135.9, ENST00000431781.2, ENST00000477418.2

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTaGAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGCTGGG +
Preference number: 1 (lower is better)
Translates to: VFCLAPCLAFWPEVL*RAEYPLASPPALAG
Trigger: CCCAGCCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR CCA 90 bp CTTTCTGGTGGCAGGGCCCAGAGCTCACGGACACCACTGACAGTATaGGGGGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAA +
Preference number: 1 (lower is better)
Translates to: LSGGRAQSSRTPLTV*GVFCLAPCLAFWPE
Trigger: TTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACCCCCCATACTGTCAGTGGTGTCCGTGAGCTCTGGGCCCTGCCACCAGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR CCA 90 bp GGCTGGGAAGCAGCACCCAGTTATTATCCCCTTTACAGCCAGGCGTaGGAGCTGAGGTTGCTTTCATACTGTTCCAGCCACAGTAGCCTC +
Preference number: 1 (lower is better)
Translates to: GWEAAPSYYPLYSQA*ELRLLSYCSSHSSL
Trigger: GAGGCTACTGTGGCTGGAACAGTATGAAAGCAACCTCAGCTCCCACGCCTGGCTGTAAAGGGGATAATAACTGGGTGCTGCTTCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR GCA 90 bp AGTAGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTaGCACAACCAGAAAGCAAAGCAGTCAGTCCTATTTCAATGCTGT +
Preference number: 1 (lower is better)
Translates to: SSLLIAPHSSAFGSG*HNQKAKQSVLFQCC
Trigger: ACAGCATTGAAATAGGACTGACTGCTTTGCTTTCTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR CCA 90 bp CCTGAAAATAAAGGCCTTGGATTACTCCCACCCATCTCCACTCCATaGGTGCAGAGAATGCTGAGGGTGCTTGCATACGAGACCATAAAG +
Preference number: 1 (lower is better)
Translates to: PENKGLGLLPPISTP*VQRMLRVLAYETIK
Trigger: CTTTATGGTCTCGTATGCAAGCACCCTCAGCATTCTCTGCACCCATGGAGTGGAGATGGGTGGGAGTAATCCAAGGCCTTTATTTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR TCA 90 bp GCCATAATGGAGGATGGTCTTTCTTCTACCCTAGACATTTCACACTaGACAGGCCTCACTTGGATCTCGGACATCTTCCTTTCTGCACTG +
Preference number: 1 (lower is better)
Translates to: AIMEDGLSSTLDISH*TGLTWISDIFLSAL
Trigger: CAGTGCAGAAAGGAAGATGTCCGAGATCCAAGTGAGGCCTGTTCAGTGTGAAATGTCTAGGGTAGAAGAAAGACCATCCTCCATTATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR TCA 90 bp ATACCAAAGGAGGGATACTCGCAATTTAGTCAGCAAAATGGGTTATaGGAAAGCCAGGCTGACCAAAGTTCAAACTTCTCATCTTTCTGC +
Preference number: 1 (lower is better)
Translates to: IPKEGYSQFSQQNGL*ESQADQSSNFSSFC
Trigger: GCAGAAAGATGAGAAGTTTGAACTTTGGTCAGCCTGGCTTTCTCATAACCCATTTTGCTGACTAAATTGCGAGTATCCCTCCTTTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR TCA 90 bp CCTAAATTAATTTGCCAACTGCCCAAACCACTGGTGAACTATCTATaGTTCAGTAATACTTTACAGGTGCCTAATTTCTTTCTCCTGATT +
Preference number: 1 (lower is better)
Translates to: PKLICQLPKPLVNYL*FSNTLQVPNFFLLI
Trigger: AATCAGGAGAAAGAAATTAGGCACCTGTAAAGTATTACTGAATCATAGATAGTTCACCAGTGGTTTGGGCAGTTGGCAAATTAATTTAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR CCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCACCAGCCCGCCAGCTCTaGCTGGGAGGACTTGCTCTT +
Preference number: 2 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSPARQL*LGGLAL
Trigger: AAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR GCA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCCAGTCCTGCCCCTTCTaGCACCAGGTTACAACTGCA +
Preference number: 2 (lower is better)
Translates to: SWALGPTGDSQLAPGCASQSCPF*HQVTTA
Trigger: TGCAGTTGTAACCTGGTGGCAGAAGGGGCAGGACTG...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR CCA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCACACCACTGACAGTATaGGGGGTGTTCTGCTTGGCA +
Preference number: 2 (lower is better)
Translates to: SWALGPTGDSQLAPGCASTPLTV*GVFCLA
Trigger: TGCCAAGCAGAACACCCCCCATACTGTCAGTGGTGT...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR CCA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCCCGCCAGCTCTGGCTaGGAGGACTTGCTCTTGGGT +
Preference number: 2 (lower is better)
Translates to: TFHHSLTRTSARLSGGRAPASSG*EDLLLG
Trigger: ACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGG...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR GCA 90 bp TGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGCCCAGTGCTGGATTATaGATCCTGCTCTCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: WPEVLCRAEYPLASPPALPSAGL*ILLSRV
Trigger: GACCCTGGAGAGCAGGATGCATAATCCAGCACTGGG...CAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR GCA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCTGGCTGGGAGGACTTaGTCTTGGGTCTGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TFHHSLTRTSARLSGGRALAGRT*SWVCSL
Trigger: CAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAG...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR CCA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGGGGAGGACTTGCTCTTaGGTCTGCAGCCTGCATCAG +
Preference number: 2 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQGRTCS*VCSLHQ
Trigger: CTGATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCC...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR CCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCAGCTTGGCACCATGTCTaGCTTTTTGGCCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSAWHHV*LFGQKS
Trigger: GGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGC...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR GCA 90 bp TGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGCTGGATTATGCATCCTaGTCTCCAGGGTCCACCTTG +
Preference number: 2 (lower is better)
Translates to: WPEVLCRAEYPLASPPALLDYAS*SPGSTL
Trigger: CAAGGTGGACCCTGGAGAGCAGGATGCATAATCCAG...CAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR GCA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGACTTGCTCTTGGGTCTaGAGCCTGCATCAGGAGCCT +
Preference number: 2 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQTCSWV*SLHQEP
Trigger: AGGCTCCTGATGCAGGCTGCAGACCCAAGAGCAAGT...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR CCA 90 bp AGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTGCCACAACCAGTCTTCCCCAAACCCCTaGGCCCGGAAGACTGAAGAA +
Preference number: 2 (lower is better)
Translates to: SLLIAPHSSAFGSGCHNQSSPNP*ARKTEE
Trigger: TTCTTCAGTCTTCCGGGCCCAGGGGTTTGGGGAAGA...CTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR CCA 90 bp AGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTGCCACAACCAGAGCCTCCCAAGTAGCTaGAACTACAGGTACGCGCCA +
Preference number: 2 (lower is better)
Translates to: SLLIAPHSSAFGSGCHNQSLPSS*NYRYAP
Trigger: TGGCGCGTACCTGTAGTTCCAGCTACTTGGGAGGCT...CTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR GCA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGCTGGATTATGCATCCTaGTCTCCAGGGTCCACCTTG +
Preference number: 2 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQLDYAS*SPGSTL
Trigger: CAAGGTGGACCCTGGAGAGCAGGATGCATAATCCAG...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR GCA 90 bp TTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCCCAGTGCTGGATTATaGATCCTGCTCTCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: FWPEVLCRAEYPLASPPAPSAGL*ILLSRV
Trigger: GACCCTGGAGAGCAGGATGCATAATCCAGCACTGGG...AGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR CCA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGGCTTGGCACCATGTCTaGCTTTTTGGCCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQAWHHV*LFGQKS
Trigger: GGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGC...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR CAA 90 bp GCACCCAGTTATTATCCCCTTTACAGCCAGGCGTGGGAGCTGAGGTaGCTTTCATACTGTTCCAGCCACAGTAGCCTCCTCATAGCCCCT +
Preference number: 2 (lower is better)
Translates to: APSYYPLYSQAWELR*LSYCSSHSSLLIAP
Trigger: AGGGGCTATGAGGAGGCTACTGTGGCTGGAACAGTATGAAAGCAACCTCAGCTCCCACGCCTGGCTGTAAAGGGGATAATAACTGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR CCA 90 bp AGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTGCCACAACCAGCACTTTCCCCAGTGCTaGATTATGCATCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: SLLIAPHSSAFGSGCHNQHFPQC*IMHPAL
Trigger: GAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTG...CTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR GCA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGTGGCCAGAAGTCCTTTaGAGAGCTGAATATCCCCTT +
Preference number: 2 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQWPEVL*RAEYPL
Trigger: AAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR CCA 90 bp GGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCCACTTTCCCCAGTGCTaGATTATGCATCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: GVLLGTMSGFLARSPLQSHFPQC*IMHPAL
Trigger: GAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTG...GCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR CCA 90 bp GGTGCTTTGAACTTCTCAGATGAAAGAGGCTGGGAAGCAGCACCCAGTTATTATCAGTGCTCGACTTTCTaGTGGCAGGGCCCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: GALNFSDERGWEAAPSYYQCSTF*WQGPEL
Trigger: GAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTG...ATAATAACTGGGTGCTGCTTCCCAGCCTCTTTCATCTGAGAAGTTCAAAGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR TCA 90 bp AGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTTGAGAGGGATAAAGGCTATAGTCTTCGATaGGCTGCACTAGCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: SLQDSLDALLVLDVERDKGYSLR*AALASH
Trigger: ATGAGAAGCTAGTGCAGCTCATCGAAGACTATAGCC...TTTATCCCTCTCAACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
3UTR-3UTR TCA 90 bp AGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTGCCACAACCAGTGGTTGAAAAATATATaGACTGCATCCAGCCAGTTG +
Preference number: 2 (lower is better)
Translates to: SLLIAPHSSAFGSGCHNQWLKNI*TASSQL
Trigger: CAACTGGCTGGATGCAGTTCATATATTTTTCAACCA...CTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR GCA 90 bp GGTGCTTTGAACTTCTCAGATGAAAGAGGCTGGGAAGCAGCACCCAGTTATTATACTTGCTCTTGGGTCTaGAGCCTGCATCAGGAGCCT +
Preference number: 2 (lower is better)
Translates to: GALNFSDERGWEAAPSYYTCSWV*SLHQEP
Trigger: AGGCTCCTGATGCAGGCTGCAGACCCAAGAGCAAGT...ATAATAACTGGGTGCTGCTTCCCAGCCTCTTTCATCTGAGAAGTTCAAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR CCA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTTGCTCGACTTTCTGGTaGCAGGGCCCAGAGCTCACG +
Preference number: 2 (lower is better)
Translates to: VQIHANKTWHNSLAQAISCSTFW*QGPELT
Trigger: CGTGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCA...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR CCA 90 bp AGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTGCCACAACCAGCATGCAAATAAAACTTaGCATAACAGTCTTGCCCAA +
Preference number: 2 (lower is better)
Translates to: SLLIAPHSSAFGSGCHNQHANKT*HNSLAQ
Trigger: TTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATG...CTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR CAA 90 bp AAGAAAATACCCTTGCTGTCAAACCATGGCCTGAAAATAAAGGCCTaGGATTACTCCCACCCATCTCCACTCCATGGGTGCAGAGAATGC +
Preference number: 2 (lower is better)
Translates to: KKIPLLSNHGLKIKA*DYSHPSPLHGCREC
Trigger: GCATTCTCTGCACCCATGGAGTGGAGATGGGTGGGAGTAATCCAAGGCCTTTATTTTCAGGCCATGGTTTGACAGCAAGGGTATTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR CCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCGGGAGGACTTGCTCTTaGGTCTGCAGCCTGCATCAG +
Preference number: 2 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTGRTCS*VCSLHQ
Trigger: CTGATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCC...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR GCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCCTTGGGTCTGCAGCCTaGATCAGGAGCCTCCACTTT +
Preference number: 2 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTLGSAA*IRSLHF
Trigger: AAAGTGGAGGCTCCTGATGCAGGCTGCAGACCCAAG...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR GCA 90 bp ACGGGCAATGGCTTATTAATTCTCCCCATCCTGTCTATCTCTAATGAGGATTGTTGGCCAGAAGTCCTTTaGAGAGCTGAATATCCCCTT +
Preference number: 2 (lower is better)
Translates to: TGNGLLILPILSISNEDCWPEVL*RAEYPL
Trigger: AAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA...ACAATCCTCATTAGAGATAGACAGGATGGGGAGAATTAATAAGCCATTGCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR TCA 72 bp TGGGCGTCAGGATTCCTGGGCTCTAGGCCCCACAGGTaGTTCACAGCTAGCCCCAGGCTGTGCCTCCTGGCC +
Preference number: 3 (lower is better)
Translates to: WASGFLGSRPHR*FTASPRLCLLA
Trigger: GGCCAGGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGAATCCTGACGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR CCA 72 bp GCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTaGCTGGGAGGACTTGCTCTTGGGTCTGCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: AELNIPLPARQL*LGGLALGSAAC
Trigger: GCAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR-3UTR CAA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCTGGGAGGACTTGCTCTaGGGTCTGCAGCCTGCATCA +
Preference number: 3 (lower is better)
Translates to: SWALGPTGDSQLAPGCASWEDLL*GLQPAS
Trigger: TGATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCA...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR CAA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCAGAGCTGAATATCCCCTaGCCAGCCCGCCAGCTCTGG +
Preference number: 3 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSELNIP*PARQLW
Trigger: CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTC...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR CCA 72 bp GGCAGGGCCCAGAGCTCACGGACACCACTGACAGTATaGGGGGTGTTCTGCTTGGCACCATGTCTGGCTTTT +
Preference number: 3 (lower is better)
Translates to: GRAQSSRTPLTV*GVFCLAPCLAF
Trigger: AAAAGCCAGACATGGTGCCAAGCAGAACACCCCCCATACTGTCAGTGGTGTCCGTGAGCTCTGGGCCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR GCA 72 bp TTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTaGAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCT +
Preference number: 3 (lower is better)
Translates to: LAPCLAFWPEVL*RAEYPLASPPA
Trigger: AGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR CCA 72 bp CCTTCCAGCCCCCATTTGGTTTGTTATGGTGAGAGCTaGGGCCTCTGTGAGTGGCAAGCATCAAAACCCACG +
Preference number: 3 (lower is better)
Translates to: PSSPHLVCYGES*GLCEWQASKPT
Trigger: CGTGGGTTTTGATGCTTGCCACTCACAGAGGCCCCAGCTCTCACCATAACAAACCAAATGGGGGCTGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR-3UTR CAA 90 bp TGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGTGGGAGGACTTGCTCTaGGGTCTGCAGCCTGCATCA +
Preference number: 3 (lower is better)
Translates to: CSAWHHVWLFGQKSFAELWEDLL*GLQPAS
Trigger: TGATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCA...CAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR CCA 72 bp GCAGCACCCAGTTATTATCCCCTTTACAGCCAGGCGTaGGAGCTGAGGTTGCTTTCATACTGTTCCAGCCAC +
Preference number: 3 (lower is better)
Translates to: AAPSYYPLYSQA*ELRLLSYCSSH
Trigger: GTGGCTGGAACAGTATGAAAGCAACCTCAGCTCCCACGCCTGGCTGTAAAGGGGATAATAACTGGGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR GCA 72 bp GCAAGCATCAAAACCCACGACCACAGCCGTTGGTACTaGTTTCAAAAGCATAGCACCCACCCTAATGCCCTG +
Preference number: 3 (lower is better)
Translates to: ASIKTHDHSRWY*FQKHSTHPNAL
Trigger: CAGGGCATTAGGGTGGGTGCTATGCTTTTGAAAGCAGTACCAACGGCTGTGGTCGTGGGTTTTGATGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR CCA 72 bp TATCCATTGGCTTTATCCACAGCCTGCAGGACTCGCTaGATGCTCTCCTTGTCCTGGATGTTGAGAGGGATA +
Preference number: 3 (lower is better)
Translates to: YPLALSTACRTR*MLSLSWMLRGI
Trigger: TATCCCTCTCAACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAATGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
3UTR-3UTR CAA 90 bp ACGGGCAATGGCTTATTAATTCTCCCCATCCTGTCTATCTCTAATGAGGATTGTCATGAGCCCAGGAGTTaGAGTCCAGCCTGGGCCATA +
Preference number: 3 (lower is better)
Translates to: TGNGLLILPILSISNEDCHEPRS*SPAWAI
Trigger: TATGGCCCAGGCTGGACTCAAACTCCTGGGCTCATG...ACAATCCTCATTAGAGATAGACAGGATGGGGAGAATTAATAAGCCATTGCCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR TCA 72 bp ATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTaGCTAGGACCAGTGCTCGACTTTCTGGTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: INSCIVAHFITA*LGPVLDFLVAG
Trigger: CCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
3UTR TCA 72 bp GTGTTAATAGGGGTGAGGTGCTTTGAACTTCTCAGATaGAAGAGGCTGGGAAGCAGCACCCAGTTATTATCC +
Preference number: 3 (lower is better)
Translates to: VLIGVRCFELLR*KRLGSSTQLLS
Trigger: GGATAATAACTGGGTGCTGCTTCCCAGCCTCTTTCATCTGAGAAGTTCAAAGCACCTCACCCCTATTAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR TCA 72 bp GAGGATGGTCTTTCTTCTACCCTAGACATTTCACACTaGACAGGCCTCACTTGGATCTCGGACATCTTCCTT +
Preference number: 3 (lower is better)
Translates to: EDGLSSTLDISH*TGLTWISDIFL
Trigger: AAGGAAGATGTCCGAGATCCAAGTGAGGCCTGTTCAGTGTGAAATGTCTAGGGTAGAAGAAAGACCATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR GCA 72 bp ACTTTACAGGTGCCTAATTTCTTTCTCCTGATTGGCTaGAAAACCTGTGGGACAAGGGCTGTGACTTCTCAC +
Preference number: 3 (lower is better)
Translates to: TLQVPNFFLLIG*KTCGTRAVTSH
Trigger: GTGAGAAGTCACAGCCCTTGTCCCACAGGTTTTGCAGCCAATCAGGAGAAAGAAATTAGGCACCTGTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR TCA 72 bp TTAGGTTGGGGTGCCACCTACTGGTTGAAAAATATATaGACTGCATCCAGCCAGTTGCAAGAGCAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: LGWGATYWLKNI*TASSQLQEQRK
Trigger: TTTTCTTTGCTCTTGCAACTGGCTGGATGCAGTTCATATATTTTTCAACCAGTAGGTGGCACCCCAACCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR TCA 72 bp GAGGGATACTCGCAATTTAGTCAGCAAAATGGGTTATaGGAAAGCCAGGCTGACCAAAGTTCAAACTTCTCA +
Preference number: 3 (lower is better)
Translates to: EGYSQFSQQNGL*ESQADQSSNFS
Trigger: TGAGAAGTTTGAACTTTGGTCAGCCTGGCTTTCTCATAACCCATTTTGCTGACTAAATTGCGAGTATCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR TCA 72 bp ATTTGCCAACTGCCCAAACCACTGGTGAACTATCTATaGTTCAGTAATACTTTACAGGTGCCTAATTTCTTT +
Preference number: 3 (lower is better)
Translates to: ICQLPKPLVNYL*FSNTLQVPNFF
Trigger: AAAGAAATTAGGCACCTGTAAAGTATTACTGAATCATAGATAGTTCACCAGTGGTTTGGGCAGTTGGCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCCCTGCCCGAAGGCCGTaGTCGGAGCGGCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SWALGPTGDSQLAPGCASPARRP*SERPLP
Trigger: TGGCAGGGGCCGCTCCGACCACGGCCTTCGGGCAGG...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp CCAGCCCGCCAGCTCTGGCTGGGAGGACTTGCTCTTGGGTCTGCAGCCTGCATCGGCTTCCTGCTCCACTaGCTGGTTCGAGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PARQLWLGGLALGSAACIGFLLH*LVRGCQ
Trigger: CTGGCACCCTCGAACCAGTCAGTGGAGCAGGAAGCC...GATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp CCAGCCCGCCAGCTCTGGCTGGGAGGACTTGCTCTTGGGTCTGCAGCCTGCATCCCAGCCCGCCAGCTCTaGCTGGGAGGACTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PARQLWLGGLALGSAACIPARQL*LGGLAL
Trigger: AAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG...GATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp GAGCTGGCGGTAGTGGCGGAAGAAAGGGTCAGAAGCCAGGTGGTCAAGCAGGTACCTGCCCGAAGGCCGTaGTCGGAGCGGCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ELAVVAEERVRSQVVKQVPARRP*SERPLP
Trigger: TGGCAGGGGCCGCTCCGACCACGGCCTTCGGGCAGG...TACCTGCTTGACCACCTGGCTTCTGACCCTTTCTTCCGCCACTACCGCCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR TCA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCGGCTTCCTGCTCCACTaGCTGGTTCGAGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SWALGPTGDSQLAPGCASGFLLH*LVRGCQ
Trigger: CTGGCACCCTCGAACCAGTCAGTGGAGCAGGAAGCC...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGGTACGTGGTCTTCCCTaGGCCCGGCGGGCCGATCAC +
Preference number: 4 (lower is better)
Translates to: GQKSFAELNIPLPARQLWVRGLP*ARRADH
Trigger: GTGATCGGCCCGCCGGGCTCAGGGAAGACCACGTAC...CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGCTGCGCAAGGCGCCGTaGTGCGTGCAGAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: GQKSFAELNIPLPARQLWLRKAP*CVQSST
Trigger: GGTGGAGCTCTGCACGCATCACGGCGCCTTGCGCAG...CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp CCAGCCCGCCAGCTCTGGCTGGGAGGACTTGCTCTTGGGTCTGCAGCCTGCATCTGCTCGACTTTCTGGTaGCAGGGCCCAGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: PARQLWLGGLALGSAACICSTFW*QGPELT
Trigger: CGTGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCA...GATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp GGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGACGGCAGCCCCTCGTTaGCCGGGTCCAGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: GQKSFAELNIPLPARQLWTAAPR*PGPGSP
Trigger: TGGTGAACCTGGACCCGGCCAACGAGGGGCTGCCGT...CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp CCAGCCCGCCAGCTCTGGCTGGGAGGACTTGCTCTTGGGTCTGCAGCCTGCATCAGTCCTTTGCAGAGCTaGATATCCCCTTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PARQLWLGGLALGSAACISPLQS*ISPCQP
Trigger: GGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACT...GATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp CCAGCCCGCCAGCTCTGGCTGGGAGGACTTGCTCTTGGGTCTGCAGCCTGCATCCTTGGGTCTGCAGCCTaGATCAGGAGCCTCCACTTT +
Preference number: 4 (lower is better)
Translates to: PARQLWLGGLALGSAACILGSAA*IRSLHF
Trigger: AAAGTGGAGGCTCCTGATGCAGGCTGCAGACCCAAG...GATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp GCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGGGCCGATCACCGCCTaGCCGAAGGCCGTGGTCGGA +
Preference number: 4 (lower is better)
Translates to: AFWPEVLCRAEYPLASPPGPITA*PKAVVG
Trigger: TCCGACCACGGCCTTCGGGCAGGCGGTGATCGGCCC...TGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCCTTCCAGGTACTCCATaGAGTAGAGCAGGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: SWALGPTGDSQLAPGCASLPGTP*SRAGRR
Trigger: ACGGCGGCCTGCTCTACTGCATGGAGTACCTGGAAG...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GCGGTAGTGGCGGAAGAAAGGGTCAGAAGCCAGGTGGTCAAGCAGGTAGGAGAGTGCCCAGGCAGTACGTaGTCTTCCCTGAGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: AVVAEERVRSQVVKQVGECPGST*SSLSPA
Trigger: CGCCGGGCTCAGGGAAGACCACGTACTGCCTGGGCA...CTCTCCTACCTGCTTGACCACCTGGCTTCTGACCCTTTCTTCCGCCACTACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CCA 90 bp CCAGCCCGCCAGCTCTGGCTGGGAGGACTTGCTCTTGGGTCTGCAGCCTGCATCGAAAGGAGGTTGATGTaGGGCAGTTCCACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PARQLWLGGLALGSAACIERRLM*GSSTCS
Trigger: GCTGCACGTGGAACTGCCCCACATCAACCTCCTTTC...GATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp TTGGCTTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGGTACGTGGTCTTCCCTaGGCCCGGCGGGCCGATCAC +
Preference number: 4 (lower is better)
Translates to: LALSTACRTRWMLSLSWMVRGLP*ARRADH
Trigger: GTGATCGGCCCGCCGGGCTCAGGGAAGACCACGTAC...CATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR GCA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCGCTTTATCCACAGCCTaGAGGACTCGCTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: SWALGPTGDSQLAPGCASALSTA*RTRWML
Trigger: GAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGC...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp AAGCAGGTAGGAGAGGTCCAGAACCTCTGTGTAGTAGTCCAGGTTGAAGGCCAGGGGCCGATCACCGCCTaGCCGAAGGCCGTGGTCGGA +
Preference number: 4 (lower is better)
Translates to: KQVGEVQNLCVVVQVEGQGPITA*PKAVVG
Trigger: TCCGACCACGGCCTTCGGGCAGGCGGTGATCGGCCC...CTGGCCTTCAACCTGGACTACTACACAGAGGTTCTGGACCTCTCCTACCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR GCA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCGCAGGAACTCACTCATaGCCAGGCAGTACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SWALGPTGDSQLAPGCASAGTHS*PGSTWS
Trigger: AGACCACGTACTGCCTGGGCATGAGTGAGTTCCTGC...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGGCGCCGTGATGCGTaGAGAGCTCCACCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQRRRDA*RAPPGL
Trigger: CAGGCCAGGTGGAGCTCTGCACGCATCACGGCGCCT...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCCCATTTGGGAGAAGATaGTGCGCAAGGCGCCGTGAT +
Preference number: 4 (lower is better)
Translates to: SWALGPTGDSQLAPGCASPFGRR*CARRRD
Trigger: ATCACGGCGCCTTGCGCAGCATCTTCTCCCAAATGG...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCAGCCCCTCATTCATCTaGCTTTGGCTCTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SWALGPTGDSQLAPGCASSPSFI*LWLWLP
Trigger: TGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCT...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCACAGTGCTCGACTTTCTaGTGGCAGGGCCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSQCSTF*WQGPEL
Trigger: GAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTG...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCAGCCTCCCAAGTAGCTaGAACTACAGGTACGCGCCA +
Preference number: 4 (lower is better)
Translates to: SWALGPTGDSQLAPGCASSLPSS*NYRYAP
Trigger: TGGCGCGTACCTGTAGTTCCAGCTACTTGGGAGGCT...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp CCAGCCCGCCAGCTCTGGCTGGGAGGACTTGCTCTTGGGTCTGCAGCCTGCATCCTTTACAGCCAGGCGTaGGAGCTGAGGTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: PARQLWLGGLALGSAACILYSQA*ELRLLS
Trigger: TGAAAGCAACCTCAGCTCCCACGCCTGGCTGTAAAG...GATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp ATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTTGAGAGGCAAGGCGCCCCTCGTTaGCCGGGTCCAGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: IHSLQDSLDALLVLDVERQGAPR*PGPGSP
Trigger: TGGTGAACCTGGACCCGGCCAACGAGGGGCGCCTTG...CCTCTCAACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR TCA 90 bp CCAGCCCGCCAGCTCTGGCTGGGAGGACTTGCTCTTGGGTCTGCAGCCTGCATCCTGGGCCCGGAAGACTaGAGAAAAGTTTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PARQLWLGGLALGSAACILGPED*RKVWKS
Trigger: TGACTTCCAAACTTTTCTTCAGTCTTCCGGGCCCAG...GATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCAGGCGGGAAGATCACATaGGCCCAGGAGTTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSGGKIT*AQEFES
Trigger: GGACTCAAACTCCTGGGCTCATGTGATCTTCCCGCC...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp CCATTGGCTTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGTGGGGCAGTTCCACGTaGAGCATGGTGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PLALSTACRTRWMLSLSWWGSST*SMVARE
Trigger: CTCCCTGGCCACCATGCTGCACGTGGAACTGCCCCA...CCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CCA 90 bp TGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGTGCTCGACTTTCTGGTaGCAGGGCCCAGAGCTCACG +
Preference number: 4 (lower is better)
Translates to: WPEVLCRAEYPLASPPALCSTFW*QGPELT
Trigger: CGTGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCA...CAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp GGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGGCAGCCAGTCCAGGTTaGCTTCCAGGTACTCCATGC +
Preference number: 4 (lower is better)
Translates to: GQKSFAELNIPLPARQLWAASPG*LPGTPC
Trigger: GCATGGAGTACCTGGAAGCCAACCTGGACTGGCTGC...CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCAGAGCTCCACCTGGCCTaGGCAGTCGAAGAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSELHLA*AVEEEV
Trigger: TACTTCCTCTTCGACTGCCCAGGCCAGGTGGAGCTC...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGGTGCAGAGCTCCACCTaGCCTGGGCAGTCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQVQSST*PGQSKR
Trigger: CCTCTTCGACTGCCCAGGCCAGGTGGAGCTCTGCAC...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCACCACGTGCAGCATGGTaGCCAGGGAGGTACACAGTA +
Preference number: 4 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSPRAAW*PGRYTV
Trigger: TACTGTGTACCTCCCTGGCCACCATGCTGCACGTGG...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp TGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGCACTAGCTTCTCATTaGGCTGGCGGTAGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: WPEVLCRAEYPLASPPALALASH*AGGSGG
Trigger: TCCGCCACTACCGCCAGCTCAATGAGAAGCTAGTGC...CAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR TCA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCACTCAGGCGGAACAGCTaGGACCGTGTCGCGCAAAAG +
Preference number: 4 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPLRRNS*DRVAQK
Trigger: CTTTTGCGCGACACGGTCTCAGCTGTTCCGCCTGAG...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp CCATTGGCTTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGCTCAGGCGGAACAGCTaGGACCGTGTCGCGCAAAAG +
Preference number: 4 (lower is better)
Translates to: PLALSTACRTRWMLSLSWLRRNS*DRVAQK
Trigger: CTTTTGCGCGACACGGTCTCAGCTGTTCCGCCTGAG...CCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR TCA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGTCTAGGCCCCACAGGTaGTTCACAGCTAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQSRPHR*FTASPR
Trigger: CCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGA...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp GGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGGCTTTATCCACAGCCTaGAGGACTCGCTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: GQKSFAELNIPLPARQLWALSTA*RTRWML
Trigger: GAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGC...CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCACCCAGTGCTGGATTATaGATCCTGCTCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSPSAGL*ILLSRV
Trigger: GACCCTGGAGAGCAGGATGCATAATCCAGCACTGGG...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCAACTTGCTCTTGGGTCTaGAGCCTGCATCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSTCSWV*SLHQEP
Trigger: AGGCTCCTGATGCAGGCTGCAGACCCAAGAGCAAGT...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp GGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGAGCCTGAGGTCCCACTaGGCCATTTGGGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: GQKSFAELNIPLPARQLWSLRSH*AIWEKM
Trigger: CATCTTCTCCCAAATGGCGCAGTGGGACCTCAGGCT...CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCTGGGGCAGTTCCACGTaGAGCATGGTGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TFHHSLTRTSARLSGGRAWGSST*SMVARE
Trigger: CTCCCTGGCCACCATGCTGCACGTGGAACTGCCCCA...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCACAGTCCTGCCCCTTCTaGCACCAGGTTACAACTGCA +
Preference number: 4 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSQSCPF*HQVTTA
Trigger: TGCAGTTGTAACCTGGTGGCAGAAGGGGCAGGACTG...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp AGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTGCCACAACCAGGCTAGCCCCAGGCTGTaGCTCCTGGCCTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SLLIAPHSSAFGSGCHNQASPRL*LLASVF
Trigger: GAAAACTGAGGCCAGGAGGCACAGCCTGGGGCTAGC...CTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp ATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTTGAGAGGGCACTAGCTTCTCATTaGGCTGGCGGTAGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: IHSLQDSLDALLVLDVERALASH*AGGSGG
Trigger: TCCGCCACTACCGCCAGCTCAATGAGAAGCTAGTGC...CCTCTCAACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR TCA 90 bp TGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGAGGCAGAGAATTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: WPEVLCRAEYPLASPPALRQRIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAATTCTCTGCCT...CAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCAGCTTCCAAGCTTCGCTaGTCTTGGGCTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSASKLR*SWALKQ
Trigger: CTGTTTCAGAGCCCAAGAGCAGCGAAGCTTGGAAGC...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCATTGCGGCAGACATCATaGCTTCCAAGCTTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSLRQTS*LPSFAA
Trigger: AGCAGCGAAGCTTGGAAGCCATGATGTCTGCCGCAA...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp GGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGTTGCGGCAGACATCATaGCTTCCAAGCTTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GQKSFAELNIPLPARQLWLRQTS*LPSFAA
Trigger: AGCAGCGAAGCTTGGAAGCCATGATGTCTGCCGCAA...CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGTCCTGCTCCACTGACTaGTTCGAGGGTGCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQSCSTD*FEGARY
Trigger: GTACCTGGCACCCTCGAACCAGTCAGTGGAGCAGGA...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCAGGGAGGACTTGCTCTTaGGTCTGCAGCCTGCATCAG +
Preference number: 4 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPGRTCS*VCSLHQ
Trigger: CTGATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCC...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGTGCTCGACTTTCTaGTGGCAGGGCCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: TFHHSLTRTSARLSGGRAQCSTF*WQGPEL
Trigger: GAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTG...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp TTGGCTTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGGTACGTATACCTCGTTaGCGGCCAGCGTCACTCGCC +
Preference number: 4 (lower is better)
Translates to: LALSTACRTRWMLSLSWMVRIPR*RPASLA
Trigger: GGCGAGTGACGCTGGCCGCCAACGAGGTATACGTAC...CATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CCA 90 bp CCATTGGCTTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGCCACGTGCAGCATGGTaGCCAGGGAGGTACACAGTA +
Preference number: 4 (lower is better)
Translates to: PLALSTACRTRWMLSLSWPRAAW*PGRYTV
Trigger: TACTGTGTACCTCCCTGGCCACCATGCTGCACGTGG...CCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR TCA 90 bp TTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTGCACTAGCTTCTCATTaGGCTGGCGGTAGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: FWPEVLCRAEYPLASPPAALASH*AGGSGG
Trigger: TCCGCCACTACCGCCAGCTCAATGAGAAGCTAGTGC...AGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR TCA 90 bp GGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGGCTGCTCTTGGGCTCTaGAACAGTATCCATTGGCTT +
Preference number: 4 (lower is better)
Translates to: GQKSFAELNIPLPARQLWAALGL*NSIHWL
Trigger: AAGCCAATGGATACTGTTTCAGAGCCCAAGAGCAGC...CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR TCA 90 bp GGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGGGAGGTACACAGTACTaGAATGAACTTGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GQKSFAELNIPLPARQLWGGTQY*NELGRV
Trigger: GACCCTGCCAAGTTCATTTCAGTACTGTGTACCTCC...CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCAATGAGCCCAGGAGTTTaGGTCCAGCCTGGGCCATAT +
Preference number: 4 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPMSPGV*VQPGPY
Trigger: ATATGGCCCAGGCTGGACTCAAACTCCTGGGCTCAT...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCTGGGCTTACAGGCATaGGTGAACACGCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: TFHHSLTRTSARLSGGRALGLQA*VNTPSL
Trigger: AAGGCTGGGCGTGTTCACTCATGCCTGTAAGCCCAG...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCATGAGAAAGCCAGGCTaGCCAAAGTTCAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: SWALGPTGDSQLAPGCASMRKPG*PKFKLL
Trigger: GAGAAGTTTGAACTTTGGTCAGCCTGGCTTTCTCAT...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCAGCCAGGCGTGGGAGCTaGGGTTGCTTTCATACTGTT +
Preference number: 4 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPARRGS*GCFHTV
Trigger: AACAGTATGAAAGCAACCTCAGCTCCCACGCCTGGC...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp AGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTGCCACAACCAGGAAGTCGGCTCCCATTaGGGCAGACATCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: SLLIAPHSSAFGSGCHNQEVGSH*GRHHGF
Trigger: GAAGCCATGATGTCTGCCGCAATGGGAGCCGACTTC...CTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGCTTGGGTCTGCAGCCTaGATCAGGAGCCTCCACTTT +
Preference number: 4 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQLGSAA*IRSLHF
Trigger: AAAGTGGAGGCTCCTGATGCAGGCTGCAGACCCAAG...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp GGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCCTGGCTGGGAGGACTTaGTCTTGGGTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GVLLGTMSGFLARSPLQSLAGRT*SWVCSL
Trigger: CAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAG...GCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp CCAGCCCGCCAGCTCTGGCTGGGAGGACTTGCTCTTGGGTCTGCAGCCTGCATCAGGCGTGCAACACCATaGCCAGCTAATTTTTATGTT +
Preference number: 4 (lower is better)
Translates to: PARQLWLGGLALGSAACIRRATP*PANFYV
Trigger: AACATAAAAATTAGCTGGGCATGGTGTTGCACGCCT...GATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp AAGCAGGTAGGAGAGGTCCAGAACCTCTGTGTAGTAGTCCAGGTTGAAGGCCAGCCATTTGGGAGAAGATaGTGCGCAAGGCGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: KQVGEVQNLCVVVQVEGQPFGRR*CARRPS
Trigger: CGAGGGGCGCCTTGCGCAGCATCTTCTCCCAAATGG...CTGGCCTTCAACCTGGACTACTACACAGAGGTTCTGGACCTCTCCTACCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCACACTTTCCCCAGTGCTaGATTATGCATCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSHFPQC*IMHPAL
Trigger: GAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTG...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp TGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGCCCGCCAGCTCTGGCTaGGAGGACTTGCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: CSAWHHVWLFGQKSFAELPASSG*EDLLLG
Trigger: ACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGG...CAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp TGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGACACCACTGACAGTATaGGGGGTGTTCTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: WPEVLCRAEYPLASPPALTPLTV*GVFCLA
Trigger: TGCCAAGCAGAACACCCCCCATACTGTCAGTGGTGT...CAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp ATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTTGAGAGGGAAAGGAGGTTGATGTaGGGCAGTTCCACGTGCAGC +
Preference number: 4 (lower is better)
Translates to: IHSLQDSLDALLVLDVERERRLM*GSSTCS
Trigger: GCTGCACGTGGAACTGCCCCACATCAACCTCCTTTC...CCTCTCAACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR TCA 90 bp GCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCACTTGTCTTACACTCCTaGCCTCAGGTGATCAGCCCG +
Preference number: 4 (lower is better)
Translates to: AFWPEVLCRAEYPLASPPLVLHS*PQVISP
Trigger: CGGGCTGATCACCTGAGGTCAGGAGTGTAAGACAAG...TGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp TTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCAGGGTCCACCTTGTTaGTACAGCTGCATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FWPEVLCRAEYPLASPPAQGPPC*YSCMAS
Trigger: GGAAGCCATGCAGCTGTAGCAACAAGGTGGACCCTG...AGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCACTGGATTATGCATCCTaGTCTCCAGGGTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPLDYAS*SPGSTL
Trigger: CAAGGTGGACCCTGGAGAGCAGGATGCATAATCCAG...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp TTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTACTTGCTCTTGGGTCTaGAGCCTGCATCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: FWPEVLCRAEYPLASPPATCSWV*SLHQEP
Trigger: AGGCTCCTGATGCAGGCTGCAGACCCAAGAGCAAGT...AGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp GGCTTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTTAGCCTGAGGTCCCACTaGGCCATTTGGGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: GFIHSLQDSLDALLVLDVSLRSH*AIWEKM
Trigger: CATCTTCTCCCAAATGGCGCAGTGGGACCTCAGGCT...AACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR GCA 90 bp GCGGTAGTGGCGGAAGAAAGGGTCAGAAGCCAGGTGGTCAAGCAGGTAGGAGAGACTTGGCAGGGTCTGTaGAGTAGTGAGAATCCACGA +
Preference number: 4 (lower is better)
Translates to: AVVAEERVRSQVVKQVGETWQGL*SSENPR
Trigger: TCGTGGATTCTCACTACTGCACAGACCCTGCCAAGT...CTCTCCTACCTGCTTGACCACCTGGCTTCTGACCCTTTCTTCCGCCACTACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR GCA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCAGGAATTACAGGCGCATaGCACCATGCCCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPGITGA*HHALLI
Trigger: AATGAGCAGGGCATGGTGGCATGCGCCTGTAATTCC...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp GGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTTACCCAGGCTGGAGTaGAATGGCGCGATCTCCGCT +
Preference number: 4 (lower is better)
Translates to: GVLLGTMSGFLARSPLQSLPRLE*NGAISA
Trigger: AGCGGAGATCGCGCCATTGCACTCCAGCCTGGGTAA...GCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp AAGCAGGTAGGAGAGGTCCAGAACCTCTGTGTAGTAGTCCAGGTTGAAGGCCAGTTTGGGAGAAGATGCTaGGCAAGGCGCCCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: KQVGEVQNLCVVVQVEGQFGRRC*ARRPSL
Trigger: CAACGAGGGGCGCCTTGCGCAGCATCTTCTCCCAAA...CTGGCCTTCAACCTGGACTACTACACAGAGGTTCTGGACCTCTCCTACCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CCA 90 bp GGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGAAGCTTCGCTGCTCTTaGGCTCTGAAACAGTATCCA +
Preference number: 4 (lower is better)
Translates to: GQKSFAELNIPLPARQLWKLRCS*ALKQYP
Trigger: TGGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTT...CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCAGCTTGGCACCATGTCTaGCTTTTTGGCCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPAWHHV*LFGQKS
Trigger: GGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGC...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp GCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCATCTTCCCCAAACCCCTaGGCCCGGAAGACTGAAGAA +
Preference number: 4 (lower is better)
Translates to: AFWPEVLCRAEYPLASPPSSPNP*ARKTEE
Trigger: TTCTTCAGTCTTCCGGGCCCAGGGGTTTGGGGAAGA...TGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp AGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTGCCACAACCAGTGGCTGCAAAACCTGTaGGACAAGGGCTGTGACTTC +
Preference number: 4 (lower is better)
Translates to: SLLIAPHSSAFGSGCHNQWLQNL*DKGCDF
Trigger: GAAGTCACAGCCCTTGTCCCACAGGTTTTGCAGCCA...CTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCATTTGTCCAGTAGCCTaGGCGTCAGGATTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TFHHSLTRTSARLSGGRAICPVA*ASGFLG
Trigger: GCCCAGGAATCCTGACGCCCAGGCTACTGGACAAAT...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp AGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTGCCACAACCAGTGTTATGGTGAGAGCTaGGGCCTCTGTGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SLLIAPHSSAFGSGCHNQCYGES*GLCEWQ
Trigger: TTGCCACTCACAGAGGCCCCAGCTCTCACCATAACA...CTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCACATTTCATCACAGCCTaGCTAGGACCAGTGCTCGAC +
Preference number: 4 (lower is better)
Translates to: AFWPEVLCRAEYPLASPPHFITA*LGPVLD
Trigger: GTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATG...TGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR TCA 90 bp TTGGCTTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTCTTGGAAAGGAGGTTaGTGTGGGGCAGTTCCACGT +
Preference number: 4 (lower is better)
Translates to: LALSTACRTRWMLSLSWMSWKGG*CGAVPR
Trigger: ACGTGGAACTGCCCCACATCAACCTCCTTTCCAAGA...CATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR TCA 90 bp TGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGAGGGGTGAGGTGCTTTaGACTTCTCAGATGAAAGAG +
Preference number: 4 (lower is better)
Translates to: WPEVLCRAEYPLASPPALRGEVL*TSQMKE
Trigger: CTCTTTCATCTGAGAAGTTCAAAGCACCTCACCCCT...CAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp AGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTTGAGAGGGATAAAGCAGGACTCGCTGGATaGTCTCCTTGTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SLQDSLDALLVLDVERDKAGLAG*SPCPGC
Trigger: ACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGC...TTTATCCCTCTCAACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR GCA 90 bp GGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCGAAGTCGGCTCCCATTaGGGCAGACATCATGGCTTC +
Preference number: 4 (lower is better)
Translates to: GVLLGTMSGFLARSPLQSEVGSH*GRHHGF
Trigger: GAAGCCATGATGTCTGCCGCAATGGGAGCCGACTTC...GCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp GGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCAGCTGCATGGCTTCCTaGTCCACTGACTGGTTCGAG +
Preference number: 4 (lower is better)
Translates to: GVLLGTMSGFLARSPLQSSCMAS*STDWFE
Trigger: CTCGAACCAGTCAGTGGAGCAGGAAGCCATGCAGCT...GCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp TTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTTGAGGCAGGAACTCACTCATaGCCAGGCAGTACGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FIHSLQDSLDALLVLDVEAGTHS*PGSTWS
Trigger: AGACCACGTACTGCCTGGGCATGAGTGAGTTCCTGC...CTCAACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR GCA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCGCCTTTGGCTCTGGCTaGCACAACCAGAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: TFHHSLTRTSARLSGGRAAFGSG*HNQKAK
Trigger: CTTTGCTTTCTGGTTGTGGCAGCCAGAGCCAAAGGC...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCACCTGGATGCCCAGTGTaGAAGAGAAATGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: AFWPEVLCRAEYPLASPPPGCPV*KRNGSR
Trigger: CCGACTTCCATTTCTCTTCCACACTGGGCATCCAGG...TGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp ATTATTCCAAGGCTAGGTGACACTCCCTCATTCTTCCCCAAACCCCTGGGCCCGACACCACTGACAGTATaGGGGGTGTTCTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: IIPRLGDTPSFFPKPLGPTPLTV*GVFCLA
Trigger: TGCCAAGCAGAACACCCCCCATACTGTCAGTGGTGT...CGGGCCCAGGGGTTTGGGGAAGAATGAGGGAGTGTCACCTAGCCTTGGAATAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GGTGCTTTGAACTTCTCAGATGAAAGAGGCTGGGAAGCAGCACCCAGTTATTATTGCCCAGGCAGTACGTaGTCTTCCCTGAGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: GALNFSDERGWEAAPSYYCPGST*SSLSPA
Trigger: CGCCGGGCTCAGGGAAGACCACGTACTGCCTGGGCA...ATAATAACTGGGTGCTGCTTCCCAGCCTCTTTCATCTGAGAAGTTCAAAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR CAA 72 bp AAGCATAGCACCCACCCTAATGCCCTGATAAAGGATTaGTCCAGTAGCCTGGGCGTCAGGATTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KHSTHPNALIKD*SSSLGVRIPGL
Trigger: GAGCCCAGGAATCCTGACGCCCAGGCTACTGGACAAATCCTTTATCAGGGCATTAGGGTGGGTGCTATGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTGCTCTTGGGCTCTaGAACAGTATCCATTGGCTT +
Preference number: 4 (lower is better)
Translates to: AFWPEVLCRAEYPLASPPAALGL*NSIHWL
Trigger: AAGCCAATGGATACTGTTTCAGAGCCCAAGAGCAGC...TGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR TCA 90 bp GGCTTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTTGGAGGTACACAGTACTaGAATGAACTTGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GFIHSLQDSLDALLVLDVGGTQY*NELGRV
Trigger: GACCCTGCCAAGTTCATTTCAGTACTGTGTACCTCC...AACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR TCA 90 bp GGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGGTGAAAGCTGAAGCTTaGGGCTCTGTTAAAACTGAA +
Preference number: 4 (lower is better)
Translates to: GQKSFAELNIPLPARQLWVKAEA*GSVKTE
Trigger: TTCAGTTTTAACAGAGCCTCAAGCTTCAGCTTTCAC...CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp TGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGGCAGGACTCGCTGGATaGTCTCCTTGTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: CSAWHHVWLFGQKSFAELAGLAG*SPCPGC
Trigger: ACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGC...CAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp GGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCGCTTCCAAGCTTCGCTaGTCTTGGGCTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: GVLLGTMSGFLARSPLQSASKLR*SWALKQ
Trigger: CTGTTTCAGAGCCCAAGAGCAGCGAAGCTTGGAAGC...GCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp TGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGCCCAGTGCTGGATTATaGATCCTGCTCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CSAWHHVWLFGQKSFAELPSAGL*ILLSRV
Trigger: GACCCTGGAGAGCAGGATGCATAATCCAGCACTGGG...CAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp TTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTACTTGGCAGGGTCTGTaGAGTAGTGAGAATCCACGA +
Preference number: 4 (lower is better)
Translates to: FWPEVLCRAEYPLASPPATWQGL*SSENPR
Trigger: TCGTGGATTCTCACTACTGCACAGACCCTGCCAAGT...AGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGCACAGCCGTTGGTACTaGTTTCAAAAGCATAGCACC +
Preference number: 4 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQHSRWY*FQKHST
Trigger: GGTGCTATGCTTTTGAAAGCAGTACCAACGGCTGTG...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GAGCTGGCGGTAGTGGCGGAAGAAAGGGTCAGAAGCCAGGTGGTCAAGCAGGTAATGCTCTCCTTGTCCTaGATGTTGAGAGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: ELAVVAEERVRSQVVKQVMLSLS*MLRGIK
Trigger: CTTTATCCCTCTCAACATCCAGGACAAGGAGAGCAT...TACCTGCTTGACCACCTGGCTTCTGACCCTTTCTTCCGCCACTACCGCCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CCA 90 bp GCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAAGTGTGGAAGAGAAATaGAAGTCGGCTCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: AFWPEVLCRAEYPLASPPSVEEK*KSAPIA
Trigger: CGCAATGGGAGCCGACTTCCATTTCTCTTCCACACT...TGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp GGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCGTTGCTACAGCTGCATaGCTTCCTGCTCCACTGACT +
Preference number: 4 (lower is better)
Translates to: GVLLGTMSGFLARSPLQSVATAA*LPAPLT
Trigger: AGTCAGTGGAGCAGGAAGCCATGCAGCTGTAGCAAC...GCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp TTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCACTTTCCCCAGTGCTaGATTATGCATCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: FWPEVLCRAEYPLASPPAHFPQC*IMHPAL
Trigger: GAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTG...AGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp TGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGTCCCACTGCGCCATTTaGGAGAAGATGCTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: CSAWHHVWLFGQKSFAELSHCAI*EKMLRK
Trigger: CTTGCGCAGCATCTTCTCCCAAATGGCGCAGTGGGA...CAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp AGTATCCATTGGCTTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTTCCCACTGCGCCATTTaGGAGAAGATGCTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: SIHWLYPQPAGLAGCSPCSHCAI*EKMLRK
Trigger: CTTGCGCAGCATCTTCTCCCAAATGGCGCAGTGGGA...ACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAATGGATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CCA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGTTCCTACCTACTCTGTaGGGTGTTAATAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQFLPTL*GVNRGE
Trigger: CTCACCCCTATTAACACCCCACAGAGTAGGTAGGAA...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCACCTGGCTTGCTCTATTaGTACTTCCTACCTACTCTG +
Preference number: 4 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPPGLLY*YFLPTL
Trigger: CAGAGTAGGTAGGAAGTACCAATAGAGCAAGCCAGG...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCACACGACCACAGCCGTTaGTACTGCTTTCAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPHDHSR*YCFQKH
Trigger: ATGCTTTTGAAAGCAGTACCAACGGCTGTGGTCGTG...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp TGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGTCATTTTGCTGCCAGTaGAAGGTAGACAGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: WPEVLCRAEYPLASPPALSFCCQ*KVDRSY
Trigger: GTAGCTTCTGTCTACCTTCCACTGGCAGCAAAATGA...CAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCAAGCCATAATGGAGGATaGTCTTTCTTCTACCCTAGA +
Preference number: 4 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSSHNGG*SFFYPR
Trigger: TCTAGGGTAGAAGAAAGACCATCCTCCATTATGGCT...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
3UTR CAA 72 bp CCCTTGCTGTCAAACCATGGCCTGAAAATAAAGGCCTaGGATTACTCCCACCCATCTCCACTCCATGGGTGC +
Preference number: 4 (lower is better)
Translates to: PLLSNHGLKIKA*DYSHPSPLHGC
Trigger: GCACCCATGGAGTGGAGATGGGTGGGAGTAATCCAAGGCCTTTATTTTCAGGCCATGGTTTGACAGCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCGGCTATAGTCTTCGATaGGCTGCACTAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TFHHSLTRTSARLSGGRAGYSLR*AALASH
Trigger: ATGAGAAGCTAGTGCAGCTCATCGAAGACTATAGCC...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR TCA 90 bp ATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTTGAGAGGTCCCATAATGCTCAATaGGGTCCATCTTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: IHSLQDSLDALLVLDVERSHNAQ*GPSWKG
Trigger: TCCTTTCCAAGATGGACCTCATTGAGCATTATGGGA...CCTCTCAACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR TCA 90 bp GCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCACTAGACATTTCACACTaGACAGGCCTCACTTGGATC +
Preference number: 4 (lower is better)
Translates to: AFWPEVLCRAEYPLASPPLDISH*TGLTWI
Trigger: GATCCAAGTGAGGCCTGTTCAGTGTGAAATGTCTAG...TGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCATTTCTCTTAAACAGATaGCCCCATAGAAAGTTTCCG +
Preference number: 4 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSFLLNR*PHRKFP
Trigger: CGGAAACTTTCTATGGGGTCATCTGTTTAAGAGAAA...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp GCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCATTCAAGCGATTCTCCTaGCTCAGTCTCCTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: AFWPEVLCRAEYPLASPPFKRFS*LSLLSS
Trigger: GCTACTTAGGAGACTGAGGCAGGAGAATCGCTTGAA...TGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp TTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTAAGCTTCGCTGCTCTTaGGCTCTGAAACAGTATCCA +
Preference number: 4 (lower is better)
Translates to: FWPEVLCRAEYPLASPPAKLRCS*ALKQYP
Trigger: TGGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTT...AGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp GGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCAGCCTCCCCAATAGCTaGGATTATAGGCGTGCAACA +
Preference number: 4 (lower is better)
Translates to: GVLLGTMSGFLARSPLQSSLPNS*DYRRAT
Trigger: TGTTGCACGCCTATAATCCCAGCTATTGGGGAGGCT...GCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp TGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGATCTGCCTTTGGCTCTaGCTGCCACAACCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: CSAWHHVWLFGQKSFAELICLWL*LPQPES
Trigger: GCTTTCTGGTTGTGGCAGCCAGAGCCAAAGGCAGAT...CAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp TGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGAGGTTTTCACCATGTTaGTCAGGCTTGTCTTACACT +
Preference number: 4 (lower is better)
Translates to: WPEVLCRAEYPLASPPALRFSPC*SGLSYT
Trigger: AGTGTAAGACAAGCCTGACCAACATGGTGAAAACCT...CAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp TGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGAAAATTAGGTTGGGGTaGCACCTACTGGTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: WPEVLCRAEYPLASPPALKIRLG*HLLVEK
Trigger: TTTTTCAACCAGTAGGTGGCACCCCAACCTAATTTT...CAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp GGTGCTTTGAACTTCTCAGATGAAAGAGGCTGGGAAGCAGCACCCAGTTATTATCCAAGCCATCAGTCCTaGCCCTTCTGCCACCAGGTT +
Preference number: 4 (lower is better)
Translates to: GALNFSDERGWEAAPSYYPSHQS*PFCHQV
Trigger: AACCTGGTGGCAGAAGGGGCAGGACTGATGGCTTGG...ATAATAACTGGGTGCTGCTTCCCAGCCTCTTTCATCTGAGAAGTTCAAAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCAAATGCTGAGGGTGCTTaGATACGAGACCATAAAGTT +
Preference number: 4 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPNAEGA*IRDHKV
Trigger: AACTTTATGGTCTCGTATGCAAGCACCCTCAGCATT...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCTTCCTTTCTGCACTGTaGAGATCCCCTCAGTATATG +
Preference number: 4 (lower is better)
Translates to: TFHHSLTRTSARLSGGRAFLSAL*RSPQYM
Trigger: CATATACTGAGGGGATCTGCACAGTGCAGAAAGGAA...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GGTGCTTTGAACTTCTCAGATGAAAGAGGCTGGGAAGCAGCACCCAGTTATTATTCCTGCTCCACTGACTaGTTCGAGGGTGCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GALNFSDERGWEAAPSYYSCSTD*FEGARY
Trigger: GTACCTGGCACCCTCGAACCAGTCAGTGGAGCAGGA...ATAATAACTGGGTGCTGCTTCCCAGCCTCTTTCATCTGAGAAGTTCAAAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTGGAGGGGGTCGAGCTTaGCACGCAGCCAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VQIHANKTWHNSLAQAISGGGRA*HAASPG
Trigger: ACCTGGACTGGCTGCGTGCCAAGCTCGACCCCCTCC...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp TGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGTGGCCAGAAGTCCTTTaGAGAGCTGAATATCCCCTT +
Preference number: 4 (lower is better)
Translates to: CSAWHHVWLFGQKSFAELWPEVL*RAEYPL
Trigger: AAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA...CAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCAGCCCTCTTGATTTTTaGCACACTCTCATAGGAACT +
Preference number: 4 (lower is better)
Translates to: TFHHSLTRTSARLSGGRASPLDF*HTLIGT
Trigger: AGTTCCTATGAGAGTGTGGCAAAAATCAAGAGGGCT...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp TTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTGTCCCTAAATTAATTTaGCAACTGCCCAAACCACTG +
Preference number: 4 (lower is better)
Translates to: FWPEVLCRAEYPLASPPAVPKLI*QLPKPL
Trigger: CAGTGGTTTGGGCAGTTGGCAAATTAATTTAGGGAC...AGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCATGCTCTCCTTGTCCTaGATGTTGAGAGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: GVLLGTMSGFLARSPLQSMLSLS*MLRGIK
Trigger: CTTTATCCCTCTCAACATCCAGGACAAGGAGAGCAT...GCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp ACGGGCAATGGCTTATTAATTCTCCCCATCCTGTCTATCTCTAATGAGGATTGTGTACGTATACCTCGTTaGCGGCCAGCGTCACTCGCC +
Preference number: 4 (lower is better)
Translates to: TGNGLLILPILSISNEDCVRIPR*RPASLA
Trigger: GGCGAGTGACGCTGGCCGCCAACGAGGTATACGTAC...ACAATCCTCATTAGAGATAGACAGGATGGGGAGAATTAATAAGCCATTGCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp TGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGAGTCTCCTAAGTAGCTaGAATTACAGGCGCATGCCA +
Preference number: 4 (lower is better)
Translates to: CSAWHHVWLFGQKSFAELSLLSS*NYRRMP
Trigger: TGGCATGCGCCTGTAATTCCAGCTACTTAGGAGACT...CAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp GGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCAATCTTAAGGATGACTaGCACATGCCAGCCATAATG +
Preference number: 4 (lower is better)
Translates to: GVLLGTMSGFLARSPLQSNLKDD*HMPAIM
Trigger: CATTATGGCTGGCATGTGGCAGTCATCCTTAAGATT...GCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GGTGCTTTGAACTTCTCAGATGAAAGAGGCTGGGAAGCAGCACCCAGTTATTATGTTGCTACAGCTGCATaGCTTCCTGCTCCACTGACT +
Preference number: 4 (lower is better)
Translates to: GALNFSDERGWEAAPSYYVATAA*LPAPLT
Trigger: AGTCAGTGGAGCAGGAAGCCATGCAGCTGTAGCAAC...ATAATAACTGGGTGCTGCTTCCCAGCCTCTTTCATCTGAGAAGTTCAAAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp ACGGGCAATGGCTTATTAATTCTCCCCATCCTGTCTATCTCTAATGAGGATTGTGGGAGGACTTGCTCTTaGGTCTGCAGCCTGCATCAG +
Preference number: 4 (lower is better)
Translates to: TGNGLLILPILSISNEDCGRTCS*VCSLHQ
Trigger: CTGATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCC...ACAATCCTCATTAGAGATAGACAGGATGGGGAGAATTAATAAGCCATTGCCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCCCAGCCCGCCAGCTCTaGCTGGGAGGACTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTPARQL*LGGLAL
Trigger: AAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp ATTATTCCAAGGCTAGGTGACACTCCCTCATTCTTCCCCAAACCCCTGGGCCCGAGAAGCTACGTTTATTaGGGAAGAAAATACCCTTGC +
Preference number: 4 (lower is better)
Translates to: IIPRLGDTPSFFPKPLGPRSYVY*GRKYPC
Trigger: GCAAGGGTATTTTCTTCCCCAATAAACGTAGCTTCT...CGGGCCCAGGGGTTTGGGGAAGAATGAGGGAGTGTCACCTAGCCTTGGAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp TTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTTCCGTTATGGGATTCTaGGTGACTCATTTTCGTTTT +
Preference number: 4 (lower is better)
Translates to: FWPEVLCRAEYPLASPPASVMGF*VTHFRF
Trigger: AAAACGAAAATGAGTCACCCAGAATCCCATAACGGA...AGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GGTGCTTTGAACTTCTCAGATGAAAGAGGCTGGGAAGCAGCACCCAGTTATTATTATTCCAAGGCTAGGTaGCACTCCCTCATTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GALNFSDERGWEAAPSYYYSKAR*HSLILP
Trigger: GGGAAGAATGAGGGAGTGTCACCTAGCCTTGGAATA...ATAATAACTGGGTGCTGCTTCCCAGCCTCTTTCATCTGAGAAGTTCAAAGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp TGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGTGCCCAAACCACTGGTaGACTATCTATGATTCAGTA +
Preference number: 4 (lower is better)
Translates to: CSAWHHVWLFGQKSFAELCPNHW*TIYDSV
Trigger: TACTGAATCATAGATAGTTCACCAGTGGTTTGGGCA...CAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTGAGCTGGGGCCTCTGTaGGTGGCAAGCATCAAAACC +
Preference number: 4 (lower is better)
Translates to: VQIHANKTWHNSLAQAISELGPL*VASIKT
Trigger: GGTTTTGATGCTTGCCACTCACAGAGGCCCCAGCTC...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCCTGGCTGGGAGGACTTaGTCTTGGGTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTLAGRT*SWVCSL
Trigger: CAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAG...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR TCA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTAGTCCTTTGCAGAGCTaGATATCCCCTTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VQIHANKTWHNSLAQAISSPLQS*ISPCQP
Trigger: GGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACT...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTAGCTGCATGGCTTCCTaGTCCACTGACTGGTTCGAG +
Preference number: 4 (lower is better)
Translates to: VQIHANKTWHNSLAQAISSCMAS*STDWFE
Trigger: CTCGAACCAGTCAGTGGAGCAGGAAGCCATGCAGCT...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCGTCCAGGTTGAAGGCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTVQVEG*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGCCTTCAACCTGGAC...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374133.3
CDS-3UTR GCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCGCAGGACTCGCTGGATaGTCTCCTTGTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTAGLAG*SPCPGC
Trigger: ACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGC...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp GGTGCTTTGAACTTCTCAGATGAAAGAGGCTGGGAAGCAGCACCCAGTTATTATTGGCCTCAGTTTTCCTaGCTTGCTCTATTGGTACTT +
Preference number: 4 (lower is better)
Translates to: GALNFSDERGWEAAPSYYWPQFS*LALLVL
Trigger: AAGTACCAATAGAGCAAGCCAGGAAAACTGAGGCCA...ATAATAACTGGGTGCTGCTTCCCAGCCTCTTTCATCTGAGAAGTTCAAAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCCATTTCATCACAGCCTaGCTAGGACCAGTGCTCGAC +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTHFITA*LGPVLD
Trigger: GTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATG...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR TCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCTCTTGGAAAGGAGGTTaGTGTGGGGCAGTTCCACGT +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTSWKGG*CGAVPR
Trigger: ACGTGGAACTGCCCCACATCAACCTCCTTTCCAAGA...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCCCTGGATGCCCAGTGTaGAAGAGAAATGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTPGCPV*KRNGSR
Trigger: CCGACTTCCATTTCTCTTCCACACTGGGCATCCAGG...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCGCTTGGCACCATGTCTaGCTTTTTGGCCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTAWHHV*LFGQKS
Trigger: GGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGC...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR TCA 90 bp ACGGGCAATGGCTTATTAATTCTCCCCATCCTGTCTATCTCTAATGAGGATTGTTCCCATAATGCTCAATaGGGTCCATCTTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TGNGLLILPILSISNEDCSHNAQ*GPSWKG
Trigger: TCCTTTCCAAGATGGACCTCATTGAGCATTATGGGA...ACAATCCTCATTAGAGATAGACAGGATGGGGAGAATTAATAAGCCATTGCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTCAGCAAAATGGGTTATaGGAAAGCCAGGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: VQIHANKTWHNSLAQAISQQNGL*ESQADQ
Trigger: TTGGTCAGCCTGGCTTTCTCATAACCCATTTTGCTG...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCGGACATCTTCCTTTCTaGACTGTGCAGATCCCCTCA +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTGHLPF*TVQIPS
Trigger: TGAGGGGATCTGCACAGTGCAGAAAGGAAGATGTCC...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCTCATTCATCTGCCTTTaGCTCTGGCTGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTSFICL*LWLPQP
Trigger: TGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGA...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTCTTCCAGCCCCCATTTaGTTTGTTATGGTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VQIHANKTWHNSLAQAISLPAPI*FVMVRA
Trigger: AGCTCTCACCATAACAAACCAAATGGGGGCTGGAAG...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCCACCGCACCCAGCCTTaGAGTAAACTTTTAACCACT +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTHRTQP*SKLLTT
Trigger: AGTGGTTAAAAGTTTACTTCAAGGCTGGGTGCGGTG...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCTTTGAACTTCTCAGATaGAAGAGGCTGGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTFELLR*KRLGSS
Trigger: GCTGCTTCCCAGCCTCTTTCATCTGAGAAGTTCAAA...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCGGTACTTCTCCTGGATaGCCAGTGTGGAAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTGTSPG*PVWKRN
Trigger: ATTTCTCTTCCACACTGGGCATCCAGGAGAAGTACC...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR GCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCTTTCTCCTGATTGGCTaGAAAACCTGTGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTFLLIG*KTCGTR
Trigger: CCTTGTCCCACAGGTTTTGCAGCCAATCAGGAGAAA...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTATGCTCTCCTTGTCCTaGATGTTGAGAGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: VQIHANKTWHNSLAQAISMLSLS*MLRGIK
Trigger: CTTTATCCCTCTCAACATCCAGGACAAGGAGAGCAT...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCACTTCCAAGCCCTCTTaGTTTTTGCCACACTCTCAT +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTTSKPS*FLPHSH
Trigger: ATGAGAGTGTGGCAAAAATCAAGAGGGCTTGGAAGT...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR TCA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCGTGGGACAAGGGCTGTaGCTTCTCACCAATAAATAT +
Preference number: 4 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTVGQGL*LLTNKY
Trigger: ATATTTATTGGTGAGAAGTCACAGCCCTTGTCCCAC...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTGAAAAATATATGAACTaGATCCAGCCAGTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: VQIHANKTWHNSLAQAISEKYMN*IQPVAR
Trigger: TCTTGCAACTGGCTGGATGCAGTTCATATATTTTTC...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR GCA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTGATCCCCTCAGTATATaGAGAGAACAGAAAATCATT +
Preference number: 4 (lower is better)
Translates to: VQIHANKTWHNSLAQAISDPLSI*REQKII
Trigger: AATGATTTTCTGTTCTCTGCATATACTGAGGGGATC...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CCA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTCATGCAAATAAAACTTaGCATAACAGTCTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: VQIHANKTWHNSLAQAISHANKT*HNSLAQ
Trigger: TTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATG...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS CCA 90 bp TCTTCCCTGAGCCCGGCGGGCCGATCACCGCCTGCCCGAAGGCCGTaGTCGGAGCGGCCCCTGCCATTGGCGGCCCGCGGCCCGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SSLSPAGRSPPARRP*SERPLPLAARGPEQ
Trigger: CTGCTCCGGGCCGCGGGCCGCCAATGGCAGGGGCCGCTCCGACCACGGCCTTCGGGCAGGCGGTGATCGGCCCGCCGGGCTCAGGGAAGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS CCA 90 bp CCAGCTCGCCCACGTCCACGGCACACTCGTACGGCAGCCCCTCGTTaGCCGGGTCCAGGTTCACCACCGCCACGCGCCGGCCCAGCGCGC +
Preference number: 5 (lower is better)
Translates to: PARPRPRHTRTAAPR*PGPGSPPPRAGPAR
Trigger: GCGCGCTGGGCCGGCGCGTGGCGGTGGTGAACCTGGACCCGGCCAACGAGGGGCTGCCGTACGAGTGTGCCGTGGACGTGGGCGAGCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS GCA 90 bp CGGGCCGATCACCGCCTGCCCGAAGGCCGTGGTCGGAGCGGCCCCTaGCATTGGCGGCCCGCGGCCCGGAGCAGGTCAACTCACAGGGAA +
Preference number: 5 (lower is better)
Translates to: RADHRLPEGRGRSGP*HWRPAARSRSTHRE
Trigger: TTCCCTGTGAGTTGACCTGCTCCGGGCCGCGGGCCGCCAATGGCAGGGGCCGCTCCGACCACGGCCTTCGGGCAGGCGGTGATCGGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS GCA 90 bp AGGCAGTACGTGGTCTTCCCTGAGCCCGGCGGGCCGATCACCGCCTaGCCGAAGGCCGTGGTCGGAGCGGCCCCTGCCATTGGCGGCCCG +
Preference number: 5 (lower is better)
Translates to: RQYVVFPEPGGPITA*PKAVVGAAPAIGGP
Trigger: CGGGCCGCCAATGGCAGGGGCCGCTCCGACCACGGCCTTCGGGCAGGCGGTGATCGGCCCGCCGGGCTCAGGGAAGACCACGTACTGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS CCA 90 bp GCCGGCCCAGCGCGCGCAGGAACTCACTCATGCCCAGGCAGTACGTaGTCTTCCCTGAGCCCGGCGGGCCGATCACCGCCTGCCCGAAGG +
Preference number: 5 (lower is better)
Translates to: AGPARAGTHSCPGST*SSLSPAGRSPPARR
Trigger: CCTTCGGGCAGGCGGTGATCGGCCCGCCGGGCTCAGGGAAGACCACGTACTGCCTGGGCATGAGTGAGTTCCTGCGCGCGCTGGGCCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS TCA 90 bp CGCGCGCAGGAACTCACTCATGCCCAGGCAGTACGTGGTCTTCCCTaGGCCCGGCGGGCCGATCACCGCCTGCCCGAAGGCCGTGGTCGG +
Preference number: 5 (lower is better)
Translates to: RAQELTHAQAVRGLP*ARRADHRLPEGRGR
Trigger: CCGACCACGGCCTTCGGGCAGGCGGTGATCGGCCCGCCGGGCTCAGGGAAGACCACGTACTGCCTGGGCATGAGTGAGTTCCTGCGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS CCA 90 bp AGTGGCCGCGGAGGGGGTCGAGCTTGGCACGCAGCCAGTCCAGGTTaGCTTCCAGGTACTCCATGCAGTAGAGCAGGCCGCCGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: SGRGGGRAWHAASPG*LPGTPCSRAGRRWA
Trigger: GGCCCAACGGCGGCCTGCTCTACTGCATGGAGTACCTGGAAGCCAACCTGGACTGGCTGCGTGCCAAGCTCGACCCCCTCCGCGGCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp CCAGCCCGCCAGCTCTGGCTGGGAGGACTTGCTCTTGGGTCTGCAGCCTGCATCTACGGCAGCCCCTCGTaGGCCGGGTCCAGGTTCACC +
Preference number: 5 (lower is better)
Translates to: PARQLWLGGLALGSAACIYGSPS*AGSRFT
Trigger: GGTGAACCTGGACCCGGCCAACGAGGGGCTGCCGTA...GATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS CCA 90 bp TCCACGAGGTGGACGGCAGTCAGCCTGAGGTCCCACTGCGCCATTTaGGAGAAGATGCTGCGCAAGGCGCCCCTCGTTGGCCGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: STRWTAVSLRSHCAI*EKMLRKAPLVGRVQ
Trigger: CTGGACCCGGCCAACGAGGGGCGCCTTGCGCAGCATCTTCTCCCAAATGGCGCAGTGGGACCTCAGGCTGACTGCCGTCCACCTCGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CAA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCACGGAGGGGGTCGAGCTaGGCACGCAGCCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSRRGSS*ARSQSR
Trigger: CCTGGACTGGCTGCGTGCCAAGCTCGACCCCCTCCG...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp GAGCTGGCGGTAGTGGCGGAAGAAAGGGTCAGAAGCCAGGTGGTCAAGCAGGTAGCAAGGCGCCCCTCGTaGGCCGGGTCCAGGTTCACC +
Preference number: 5 (lower is better)
Translates to: ELAVVAEERVRSQVVKQVARRPS*AGSRFT
Trigger: GGTGAACCTGGACCCGGCCAACGAGGGGCGCCTTGC...TACCTGCTTGACCACCTGGCTTCTGACCCTTTCTTCCGCCACTACCGCCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS TCA 90 bp AGGTCCCACTGCGCCATTTGGGAGAAGATGCTGCGCAAGGCGCCGTaGTGCGTGCAGAGCTCCACCTGGCCTGGGCAGTCGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: RSHCAIWEKMLRKAP*CVQSSTWPGQSKRK
Trigger: CTTCCTCTTCGACTGCCCAGGCCAGGTGGAGCTCTGCACGCATCACGGCGCCTTGCGCAGCATCTTCTCCCAAATGGCGCAGTGGGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS CCA 90 bp CTGGGCAGTCGAAGAGGAAGTAGTGGCCGCGGAGGGGGTCGAGCTTaGCACGCAGCCAGTCCAGGTTGGCTTCCAGGTACTCCATGCAGT +
Preference number: 5 (lower is better)
Translates to: LGSRRGSSGRGGGRA*HAASPGWLPGTPCS
Trigger: ACTGCATGGAGTACCTGGAAGCCAACCTGGACTGGCTGCGTGCCAAGCTCGACCCCCTCCGCGGCCACTACTTCCTCTTCGACTGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS GCA 90 bp ACTGCGCCATTTGGGAGAAGATGCTGCGCAAGGCGCCGTGATGCGTaGAGAGCTCCACCTGGCCTGGGCAGTCGAAGAGGAAGTAGTGGC +
Preference number: 5 (lower is better)
Translates to: TAPFGRRCCARRRDA*RAPPGLGSRRGSSG
Trigger: GCCACTACTTCCTCTTCGACTGCCCAGGCCAGGTGGAGCTCTGCACGCATCACGGCGCCTTGCGCAGCATCTTCTCCCAAATGGCGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCAGAGCTGAATATCCCCTaGCCAGCCCGCCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPELNIP*PARQLW
Trigger: CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTC...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp TCCTGGGCTCTAGGCCCCACAGGTGATTCACAGCTAGCCCCAGGCTGTGCCTCCCCTTCCAGCCCCCATTaGGTTTGTTATGGTGAGAGC +
Preference number: 5 (lower is better)
Translates to: SWALGPTGDSQLAPGCASPSSPH*VCYGES
Trigger: GCTCTCACCATAACAAACCAAATGGGGGCTGGAAGG...GGAGGCACAGCCTGGGGCTAGCTGTGAATCACCTGTGGGGCCTAGAGCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS TCA 90 bp CCAGGGTCCACCTTGTTGCTACAGCTGCATGGCTTCCTGCTCCACTaGCTGGTTCGAGGGTGCCAGGTACTTCTCCTGGATGCCCAGTGT +
Preference number: 5 (lower is better)
Translates to: PGSTLLLQLHGFLLH*LVRGCQVLLLDAQC
Trigger: ACACTGGGCATCCAGGAGAAGTACCTGGCACCCTCGAACCAGTCAGTGGAGCAGGAAGCCATGCAGCTGTAGCAACAAGGTGGACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS GCA 90 bp CCTGCTCTCCAGGGTCCACCTTGTTGCTACAGCTGCATGGCTTCCTaGTCCACTGACTGGTTCGAGGGTGCCAGGTACTTCTCCTGGATG +
Preference number: 5 (lower is better)
Translates to: PALQGPPCCYSCMAS*STDWFEGARYFSWM
Trigger: CATCCAGGAGAAGTACCTGGCACCCTCGAACCAGTCAGTGGAGCAGGAAGCCATGCAGCTGTAGCAACAAGGTGGACCCTGGAGAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS-3UTR CAA 90 bp TGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGGAAGTCGGCTCCCATaGCGGCAGACATCATGGCTT +
Preference number: 5 (lower is better)
Translates to: WPEVLCRAEYPLASPPALGSRLP*RQTSWL
Trigger: AAGCCATGATGTCTGCCGCAATGGGAGCCGACTTCC...CAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp CCAGCCCGCCAGCTCTGGCTGGGAGGACTTGCTCTTGGGTCTGCAGCCTGCATCTCCTGGCTTGCTCTATaGGTACTTCCTACCTACTCT +
Preference number: 5 (lower is better)
Translates to: PARQLWLGGLALGSAACISWLAL*VLPTYS
Trigger: AGAGTAGGTAGGAAGTACCAATAGAGCAAGCCAGGA...GATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCAGCCAGAGCTGGCGGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS CCA 90 bp GGTCCACCTTGTTGCTACAGCTGCATGGCTTCCTGCTCCACTGACTaGTTCGAGGGTGCCAGGTACTTCTCCTGGATGCCCAGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: GPPCCYSCMASCSTD*FEGARYFSWMPSVE
Trigger: TTCCACACTGGGCATCCAGGAGAAGTACCTGGCACCCTCGAACCAGTCAGTGGAGCAGGAAGCCATGCAGCTGTAGCAACAAGGTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS CCA 90 bp CTTGGGTCTGCAGCCTGCATCAGGAGCCTCCACTTTCCCCAGTGCTaGATTATGCATCCTGCTCTCCAGGGTCCACCTTGTTGCTACAGC +
Preference number: 5 (lower is better)
Translates to: LGSAACIRSLHFPQC*IMHPALQGPPCCYS
Trigger: GCTGTAGCAACAAGGTGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCTGATGCAGGCTGCAGACCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS-3UTR CAA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCACGCTGGATGCTCTCCTaGTCCTGGATGTTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPRWMLS*SWMLRG
Trigger: CCCTCTCAACATCCAGGACAAGGAGAGCATCCAGCG...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGGGAAGTCGGCTCCCATaGCGGCAGACATCATGGCTT +
Preference number: 5 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQGSRLP*RQTSWL
Trigger: AAGCCATGATGTCTGCCGCAATGGGAGCCGACTTCC...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCATCTCCAGGGTCCACCTaGTTGCTACAGCTGCATGGC +
Preference number: 5 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPSPGST*LLQLHG
Trigger: GCCATGCAGCTGTAGCAACAAGGTGGACCCTGGAGA...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCATGGGAGGACTTGCTCTaGGGTCTGCAGCCTGCATCA +
Preference number: 5 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPWEDLL*GLQPAS
Trigger: TGATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCA...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCAGTACGTATACCTCGTaGGCGGCCAGCGTCACTCGC +
Preference number: 5 (lower is better)
Translates to: TFHHSLTRTSARLSGGRASTYTS*AASVTR
Trigger: GCGAGTGACGCTGGCCGCCAACGAGGTATACGTACT...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp AGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTGCCACAACCAGCATGAGCCCAGGAGTTaGAGTCCAGCCTGGGCCATA +
Preference number: 5 (lower is better)
Translates to: SLLIAPHSSAFGSGCHNQHEPRS*SPAWAI
Trigger: TATGGCCCAGGCTGGACTCAAACTCCTGGGCTCATG...CTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS GCA 90 bp CTCCTGGATGCCCAGTGTGGAAGAGAAATGGAAGTCGGCTCCCATTaGGGCAGACATCATGGCTTCCAAGCTTCGCTGCTCTTGGGCTCT +
Preference number: 5 (lower is better)
Translates to: LLDAQCGREMEVGSH*GRHHGFQASLLLGS
Trigger: AGAGCCCAAGAGCAGCGAAGCTTGGAAGCCATGATGTCTGCCGCAATGGGAGCCGACTTCCATTTCTCTTCCACACTGGGCATCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS GCA 90 bp TGGATTATGCATCCTGCTCTCCAGGGTCCACCTTGTTGCTACAGCTaGATGGCTTCCTGCTCCACTGACTGGTTCGAGGGTGCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: WIMHPALQGPPCCYS*MASCSTDWFEGARY
Trigger: GTACCTGGCACCCTCGAACCAGTCAGTGGAGCAGGAAGCCATGCAGCTGTAGCAACAAGGTGGACCCTGGAGAGCAGGATGCATAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS GCA 90 bp CTGCATCAGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTaGTCTCCAGGGTCCACCTTGTTGCTACAGCTGCATGGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LHQEPPLSPVLDYAS*SPGSTLLLQLHGFL
Trigger: CAGGAAGCCATGCAGCTGTAGCAACAAGGTGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCTGATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS-3UTR CAA 90 bp TTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCCAGGGTCCACCTTGTaGCTACAGCTGCATGGCTTC +
Preference number: 5 (lower is better)
Translates to: FWPEVLCRAEYPLASPPAPGSTL*LQLHGF
Trigger: GAAGCCATGCAGCTGTAGCAACAAGGTGGACCCTGG...AGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp TTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTTCTCCAGGGTCCACCTaGTTGCTACAGCTGCATGGC +
Preference number: 5 (lower is better)
Translates to: FWPEVLCRAEYPLASPPASPGST*LLQLHG
Trigger: GCCATGCAGCTGTAGCAACAAGGTGGACCCTGGAGA...AGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp TGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGGAGCTGAATATCCCCTaGCCAGCCCGCCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: CSAWHHVWLFGQKSFAELELNIP*PARQLW
Trigger: CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTC...CAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp GGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCAGCTCTGGACCATGTCTGGCTTTTaGGCCAGAAGTCCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: GQKSFAELNIPLPARQLWTMSGF*ARSPLQ
Trigger: CTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGT...CCAGAGCTGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp TTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTTGAGAGTACGTATACCTCGTaGGCGGCCAGCGTCACTCGC +
Preference number: 5 (lower is better)
Translates to: FIHSLQDSLDALLVLDVESTYTS*AASVTR
Trigger: GCGAGTGACGCTGGCCGCCAACGAGGTATACGTACT...CTCAACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CAA 90 bp GGCGGTAGTGGCGGAAGAAAGGGTCAGAAGCCAGGTGGTCAAGCAGGTAGGAGAATCTTGGAAAGGAGGTaGATGTGGGGCAGTTCCACG +
Preference number: 5 (lower is better)
Translates to: GGSGGRKGQKPGGQAGRRILERR*MWGSST
Trigger: CGTGGAACTGCCCCACATCAACCTCCTTTCCAAGAT...TCTCCTACCTGCTTGACCACCTGGCTTCTGACCCTTTCTTCCGCCACTACCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS TCA 90 bp GGGCAGTTCCACGTGCAGCATGGTGGCCAGGGAGGTACACAGTACTaGAATGAACTTGGCAGGGTCTGTGCAGTAGTGAGAATCCACGAG +
Preference number: 5 (lower is better)
Translates to: GQFHVQHGGQGGTQY*NELGRVCAVVRIHE
Trigger: CTCGTGGATTCTCACTACTGCACAGACCCTGCCAAGTTCATTTCAGTACTGTGTACCTCCCTGGCCACCATGCTGCACGTGGAACTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS CCA 90 bp TTATGCATCCTGCTCTCCAGGGTCCACCTTGTTGCTACAGCTGCATaGCTTCCTGCTCCACTGACTGGTTCGAGGGTGCCAGGTACTTCT +
Preference number: 5 (lower is better)
Translates to: LCILLSRVHLVATAA*LPAPLTGSRVPGTS
Trigger: AGAAGTACCTGGCACCCTCGAACCAGTCAGTGGAGCAGGAAGCCATGCAGCTGTAGCAACAAGGTGGACCCTGGAGAGCAGGATGCATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS-3UTR CAA 90 bp TTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTTGAGCGCTGGATGCTCTCCTaGTCCTGGATGTTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: FIHSLQDSLDALLVLDVERWMLS*SWMLRG
Trigger: CCCTCTCAACATCCAGGACAAGGAGAGCATCCAGCG...CTCAACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CAA 90 bp CACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGAGCTCACTGAAACAGTATCCATaGGCTTTATCCACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: HSLTRTSARLSGGRAQSSLKQYP*ALSTAC
Trigger: GCAGGCTGTGGATAAAGCCAATGGATACTGTTTCAG...TGAGCTCTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGCAAGCTTCGCTGCTCTaGGGCTCTGAAACAGTATCC +
Preference number: 5 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQQASLL*GSETVS
Trigger: GGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTTG...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp GGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCCCAGGGTCCACCTTGTaGCTACAGCTGCATGGCTTC +
Preference number: 5 (lower is better)
Translates to: GVLLGTMSGFLARSPLQSPGSTL*LQLHGF
Trigger: GAAGCCATGCAGCTGTAGCAACAAGGTGGACCCTGG...GCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGCTTGGCATAACAGTCTaGCCCAAGCCATCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQLGITV*PKPSVL
Trigger: CAGGACTGATGGCTTGGGCAAGACTGTTATGCCAAG...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp AGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTGCCACAACCAGCCACGACCACAGCCGTaGGTACTGCTTTCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: SLLIAPHSSAFGSGCHNQPRPQP*VLLSKA
Trigger: TGCTTTTGAAAGCAGTACCAACGGCTGTGGTCGTGG...CTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS TCA 90 bp GTTCCACGTGCAGCATGGTGGCCAGGGAGGTACACAGTACTGAAATaGACTTGGCAGGGTCTGTGCAGTAGTGAGAATCCACGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: VPRAAWWPGRYTVLK*TWQGLCSSENPRGG
Trigger: TCCACCTCGTGGATTCTCACTACTGCACAGACCCTGCCAAGTTCATTTCAGTACTGTGTACCTCCCTGGCCACCATGCTGCACGTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS CCA 90 bp GCTCCCATTGCGGCAGACATCATGGCTTCCAAGCTTCGCTGCTCTTaGGCTCTGAAACAGTATCCATTGGCTTTATCCACAGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: APIAADIMASKLRCS*ALKQYPLALSTACR
Trigger: CCTGCAGGCTGTGGATAAAGCCAATGGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTTGGAAGCCATGATGTCTGCCGCAATGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS-3UTR CAA 90 bp GGCGGTAGTGGCGGAAGAAAGGGTCAGAAGCCAGGTGGTCAAGCAGGTAGGAGATCCTTGTCCTGGATGTaGAGAGGGATAAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: GGSGGRKGQKPGGQAGRRSLSWM*RGIKET
Trigger: TGTCTCCTTTATCCCTCTCAACATCCAGGACAAGGA...TCTCCTACCTGCTTGACCACCTGGCTTCTGACCCTTTCTTCCGCCACTACCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CAA 90 bp GCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGAATATCCCCTTGCCAGCCCGCCACAAGCTTCGCTGCTCTaGGGCTCTGAAACAGTATCC +
Preference number: 5 (lower is better)
Translates to: AFWPEVLCRAEYPLASPPQASLL*GSETVS
Trigger: GGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTTG...TGGCGGGCTGGCAAGGGGATATTCAGCTCTGCAAAGGACTTCTGGCCAAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp AGTATCCATTGGCTTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTGTGTCCCACTGCGCCATTaGGGAGAAGATGCTGCGCAA +
Preference number: 5 (lower is better)
Translates to: SIHWLYPQPAGLAGCSPCVPLRH*GEDAAQ
Trigger: TTGCGCAGCATCTTCTCCCAAATGGCGCAGTGGGAC...ACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAATGGATACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CAA 90 bp GGCGGTAGTGGCGGAAGAAAGGGTCAGAAGCCAGGTGGTCAAGCAGGTAGGAGATCAATGAGGTCCATCTaGGAAAGGAGGTTGATGTGG +
Preference number: 5 (lower is better)
Translates to: GGSGGRKGQKPGGQAGRRSMRSI*ERRLMW
Trigger: CCACATCAACCTCCTTTCCAAGATGGACCTCATTGA...TCTCCTACCTGCTTGACCACCTGGCTTCTGACCCTTTCTTCCGCCACTACCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS-3UTR CAA 90 bp GGTGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCCTCATTCATCTGCCTTaGGCTCTGGCTGCCACAACC +
Preference number: 5 (lower is better)
Translates to: GVLLGTMSGFLARSPLQSLIHLP*ALAATT
Trigger: GGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAG...GCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS TCA 90 bp TTGCGGCAGACATCATGGCTTCCAAGCTTCGCTGCTCTTGGGCTCTaGAACAGTATCCATTGGCTTTATCCACAGCCTGCAGGACTCGCT +
Preference number: 5 (lower is better)
Translates to: LRQTSWLPSFAALGL*NSIHWLYPQPAGLA
Trigger: AGCGAGTCCTGCAGGCTGTGGATAAAGCCAATGGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTTGGAAGCCATGATGTCTGCCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS GCA 90 bp TGCTCTTGGGCTCTGAAACAGTATCCATTGGCTTTATCCACAGCCTaGAGGACTCGCTGGATGCTCTCCTTGTCCTGGATGTTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: CSWALKQYPLALSTA*RTRWMLSLSWMLRG
Trigger: CCCTCTCAACATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAATGGATACTGTTTCAGAGCCCAAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS GCA 90 bp AAGTCGGCTCCCATTGCGGCAGACATCATGGCTTCCAAGCTTCGCTaGTCTTGGGCTCTGAAACAGTATCCATTGGCTTTATCCACAGCC +
Preference number: 5 (lower is better)
Translates to: KSAPIAADIMASKLR*SWALKQYPLALSTA
Trigger: GGCTGTGGATAAAGCCAATGGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTTGGAAGCCATGATGTCTGCCGCAATGGGAGCCGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS-3UTR CAA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGTCCTTGTCCTGGATGTaGAGAGGGATAAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQSLSWM*RGIKET
Trigger: TGTCTCCTTTATCCCTCTCAACATCCAGGACAAGGA...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp AGGAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTGCTCTCCAGGGTCCATCAATGAGGTCCATCTaGGAAAGGAGGTTGATGTGG +
Preference number: 5 (lower is better)
Translates to: RSLHFPQCWIMHPALQGPSMRSI*ERRLMW
Trigger: CCACATCAACCTCCTTTCCAAGATGGACCTCATTGA...TGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCTCCTTGTCCTGGATGTaGAGAGGGATAAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: TFHHSLTRTSARLSGGRASLSWM*RGIKET
Trigger: TGTCTCCTTTATCCCTCTCAACATCCAGGACAAGGA...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp AGCCTCCTCATAGCCCCTCATTCATCTGCCTTTGGCTCTGGCTGCCACAACCAGCTGAAAATAAAGGCCTaGGATTACTCCCACCCATCT +
Preference number: 5 (lower is better)
Translates to: SLLIAPHSSAFGSGCHNQLKIKA*DYSHPS
Trigger: AGATGGGTGGGAGTAATCCAAGGCCTTTATTTTCAG...CTGGTTGTGGCAGCCAGAGCCAAAGGCAGATGAATGAGGGGCTATGAGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp ACATTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCTCAGTTTTCCTGGCTaGCTCTATTGGTACTTCCTA +
Preference number: 5 (lower is better)
Translates to: TFHHSLTRTSARLSGGRALSFPG*LYWYFL
Trigger: TAGGAAGTACCAATAGAGCAAGCCAGGAAAACTGAG...GGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp TTTCATCACAGCCTGACTAGGACCAGTGCTCGACTTTCTGGTGGCAGGGCCCAGGAACAGAAAATCATTTaGCTGCCAGTGGAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: FHHSLTRTSARLSGGRAQEQKII*LPVEGR
Trigger: TCTACCTTCCACTGGCAGCAAAATGATTTTCTGTTC...CTGGGCCCTGCCACCAGAAAGTCGAGCACTGGTCCTAGTCAGGCTGTGATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp TGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGGATGTACTTTCCATCTaGTTACCCAGGCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: CSAWHHVWLFGQKSFAELDVLSI*LPRLEC
Trigger: GCACTCCAGCCTGGGTAACAAGATGGAAAGTACATC...CAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp ACGGGCAATGGCTTATTAATTCTCCCCATCCTGTCTATCTCTAATGAGGATTGTCGCAGCCAGTCCAGGTaGGCTTCCAGGTACTCCATG +
Preference number: 5 (lower is better)
Translates to: TGNGLLILPILSISNEDCRSQSR*ASRYSM
Trigger: CATGGAGTACCTGGAAGCCAACCTGGACTGGCTGCG...ACAATCCTCATTAGAGATAGACAGGATGGGGAGAATTAATAAGCCATTGCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp ATTATTCCAAGGCTAGGTGACACTCCCTCATTCTTCCCCAAACCCCTGGGCCCGCAGAAGCTACGTTTATaGGGGAAGAAAATACCCTTG +
Preference number: 5 (lower is better)
Translates to: IIPRLGDTPSFFPKPLGPQKLRL*GKKIPL
Trigger: CAAGGGTATTTTCTTCCCCAATAAACGTAGCTTCTG...CGGGCCCAGGGGTTTGGGGAAGAATGAGGGAGTGTCACCTAGCCTTGGAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS TCA 90 bp CAAGCAGGTAGGAGAGGTCCAGAACCTCTGTGTAGTAGTCCAGGTTaGAGGCTAAAGAGAGAAACCAGTGTTCAGGAGCAACCAGTATCA +
Preference number: 5 (lower is better)
Translates to: QAGRRGPEPLCSSPG*RLKRETSVQEQPVS
Trigger: TGATACTGGTTGCTCCTGAACACTGGTTTCTCTCTTTAGCCTTCAACCTGGACTACTACACAGAGGTTCTGGACCTCTCCTACCTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477418.2
CDS-3UTR CAA 90 bp GGTGCTTTGAACTTCTCAGATGAAAGAGGCTGGGAAGCAGCACCCAGTTATTATATCTTGGAAAGGAGGTaGATGTGGGGCAGTTCCACG +
Preference number: 5 (lower is better)
Translates to: GALNFSDERGWEAAPSYYILERR*MWGSST
Trigger: CGTGGAACTGCCCCACATCAACCTCCTTTCCAAGAT...ATAATAACTGGGTGCTGCTTCCCAGCCTCTTTCATCTGAGAAGTTCAAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp TGTTCTGCTTGGCACCATGTCTGGCTTTTTGGCCAGAAGTCCTTTGCAGAGCTGAACTTCCAAGCCCTCTaGATTTTTGCCACACTCTCA +
Preference number: 5 (lower is better)
Translates to: CSAWHHVWLFGQKSFAELNFQAL*IFATLS
Trigger: TGAGAGTGTGGCAAAAATCAAGAGGGCTTGGAAGTT...CAGCTCTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGTGCCAAGCAGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTTGGGAGGACTTGCTCTaGGGTCTGCAGCCTGCATCA +
Preference number: 5 (lower is better)
Translates to: VQIHANKTWHNSLAQAISWEDLL*GLQPAS
Trigger: TGATGCAGGCTGCAGACCCAAGAGCAAGTCCTCCCA...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTGTCCCACTGCGCCATTaGGGAGAAGATGCTGCGCAA +
Preference number: 5 (lower is better)
Translates to: VQIHANKTWHNSLAQAISVPLRH*GEDAAQ
Trigger: TTGCGCAGCATCTTCTCCCAAATGGCGCAGTGGGAC...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp GTCCAAATACATGCAAATAAAACTTGGCATAACAGTCTTGCCCAAGCCATCAGTGCCCTGATAAAGGATTaGTCCAGTAGCCTGGGCGTC +
Preference number: 5 (lower is better)
Translates to: VQIHANKTWHNSLAQAISALIKD*SSSLGV
Trigger: GACGCCCAGGCTACTGGACAAATCCTTTATCAGGGC...ACTGATGGCTTGGGCAAGACTGTTATGCCAAGTTTTATTTGCATGTATTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCGCGTGGGAGCTGAGGTaGCTTTCATACTGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTAWELR*LSYCSS
Trigger: GCTGGAACAGTATGAAAGCAACCTCAGCTCCCACGC...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCCTGAACAGGCCTCACTaGGATCTCGGACATCTTCCT +
Preference number: 5 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTLNRPH*DLGHLP
Trigger: AGGAAGATGTCCGAGATCCAAGTGAGGCCTGTTCAG...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp ACGGGCAATGGCTTATTAATTCTCCCCATCCTGTCTATCTCTAATGAGGATTGTCAGGTTTTCACCATGTaGGTCAGGCTTGTCTTACAC +
Preference number: 5 (lower is better)
Translates to: TGNGLLILPILSISNEDCQVFTM*VRLVLH
Trigger: GTGTAAGACAAGCCTGACCAACATGGTGAAAACCTG...ACAATCCTCATTAGAGATAGACAGGATGGGGAGAATTAATAAGCCATTGCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS-3UTR CAA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCACCATGTCTGGCTTTTaGGCCAGAAGTCCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTTMSGF*ARSPLQ
Trigger: CTGCAAAGGACTTCTGGCCAAAAAGCCAGACATGGT...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS-3UTR CAA 90 bp GTAGAAAATAAACTCTTGTATTGTAGCACATTTCATCACAGCCTGACTAGGACCCTGAAACAGTATCCATaGGCTTTATCCACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: VENKLLYCSTFHHSLTRTLKQYP*ALSTAC
Trigger: GCAGGCTGTGGATAAAGCCAATGGATACTGTTTCAG...GGTCCTAGTCAGGCTGTGATGAAATGTGCTACAATACAAGAGTTTATTTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374133.3
ENST00000374135.9
CDS GCA 72 bp CACCGCCTGCCCGAAGGCCGTGGTCGGAGCGGCCCCTaGCATTGGCGGCCCGCGGCCCGGAGCAGGTCAACT +
Preference number: 6 (lower is better)
Translates to: HRLPEGRGRSGP*HWRPAARSRST
Trigger: AGTTGACCTGCTCCGGGCCGCGGGCCGCCAATGGCAGGGGCCGCTCCGACCACGGCCTTCGGGCAGGCGGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS CCA 72 bp CTGCCCGAAGGCCGTGGTCGGAGCGGCCCCTGCCATTaGCGGCCCGCGGCCCGGAGCAGGTCAACTCACAGG +
Preference number: 6 (lower is better)
Translates to: LPEGRGRSGPCH*RPAARSRSTHR
Trigger: CCTGTGAGTTGACCTGCTCCGGGCCGCGGGCCGCCAATGGCAGGGGCCGCTCCGACCACGGCCTTCGGGCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS CAA 90 bp ACCAGCTCGCCCACGTCCACGGCACACTCGTACGGCAGCCCCTCGTaGGCCGGGTCCAGGTTCACCACCGCCACGCGCCGGCCCAGCGCG +
Preference number: 6 (lower is better)
Translates to: TSSPTSTAHSYGSPS*AGSRFTTATRRPSA
Trigger: CGCGCTGGGCCGGCGCGTGGCGGTGGTGAACCTGGACCCGGCCAACGAGGGGCTGCCGTACGAGTGTGCCGTGGACGTGGGCGAGCTGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS GCA 72 bp GTGGTCTTCCCTGAGCCCGGCGGGCCGATCACCGCCTaGCCGAAGGCCGTGGTCGGAGCGGCCCCTGCCATT +
Preference number: 6 (lower is better)
Translates to: VVFPEPGGPITA*PKAVVGAAPAI
Trigger: AATGGCAGGGGCCGCTCCGACCACGGCCTTCGGGCAGGCGGTGATCGGCCCGCCGGGCTCAGGGAAGACCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS CCA 72 bp CCACGTCCACGGCACACTCGTACGGCAGCCCCTCGTTaGCCGGGTCCAGGTTCACCACCGCCACGCGCCGGC +
Preference number: 6 (lower is better)
Translates to: PRPRHTRTAAPR*PGPGSPPPRAG
Trigger: GCCGGCGCGTGGCGGTGGTGAACCTGGACCCGGCCAACGAGGGGCTGCCGTACGAGTGTGCCGTGGACGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS CAA 72 bp CCCACGTCCACGGCACACTCGTACGGCAGCCCCTCGTaGGCCGGGTCCAGGTTCACCACCGCCACGCGCCGG +
Preference number: 6 (lower is better)
Translates to: PTSTAHSYGSPS*AGSRFTTATRR
Trigger: CCGGCGCGTGGCGGTGGTGAACCTGGACCCGGCCAACGAGGGGCTGCCGTACGAGTGTGCCGTGGACGTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS GCA 72 bp CCACGCGCCGGCCCAGCGCGCGCAGGAACTCACTCATaGCCAGGCAGTACGTGGTCTTCCCTGAGCCCGGCG +
Preference number: 6 (lower is better)
Translates to: PRAGPARAGTHS*PGSTWSSLSPA
Trigger: CGCCGGGCTCAGGGAAGACCACGTACTGCCTGGGCATGAGTGAGTTCCTGCGCGCGCTGGGCCGGCGCGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS CCA 72 bp GCGCGCGCAGGAACTCACTCATGCCCAGGCAGTACGTaGTCTTCCCTGAGCCCGGCGGGCCGATCACCGCCT +
Preference number: 6 (lower is better)
Translates to: ARAGTHSCPGST*SSLSPAGRSPP
Trigger: AGGCGGTGATCGGCCCGCCGGGCTCAGGGAAGACCACGTACTGCCTGGGCATGAGTGAGTTCCTGCGCGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS TCA 72 bp GAACTCACTCATGCCCAGGCAGTACGTGGTCTTCCCTaGGCCCGGCGGGCCGATCACCGCCTGCCCGAAGGC +
Preference number: 6 (lower is better)
Translates to: ELTHAQAVRGLP*ARRADHRLPEG
Trigger: GCCTTCGGGCAGGCGGTGATCGGCCCGCCGGGCTCAGGGAAGACCACGTACTGCCTGGGCATGAGTGAGTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS GCA 72 bp CACGCAGCCAGTCCAGGTTGGCTTCCAGGTACTCCATaGAGTAGAGCAGGCCGCCGTTGGGCCCCAGGCGCA +
Preference number: 6 (lower is better)
Translates to: HAASPGWLPGTP*SRAGRRWAPGA
Trigger: TGCGCCTGGGGCCCAACGGCGGCCTGCTCTACTGCATGGAGTACCTGGAAGCCAACCTGGACTGGCTGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS TCA 72 bp TGCGCCATTTGGGAGAAGATGCTGCGCAAGGCGCCGTaGTGCGTGCAGAGCTCCACCTGGCCTGGGCAGTCG +
Preference number: 6 (lower is better)
Translates to: CAIWEKMLRKAP*CVQSSTWPGQS
Trigger: CGACTGCCCAGGCCAGGTGGAGCTCTGCACGCATCACGGCGCCTTGCGCAGCATCTTCTCCCAAATGGCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS CCA 72 bp GGAGGGGGTCGAGCTTGGCACGCAGCCAGTCCAGGTTaGCTTCCAGGTACTCCATGCAGTAGAGCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: GGGRAWHAASPG*LPGTPCSRAGR
Trigger: GCGGCCTGCTCTACTGCATGGAGTACCTGGAAGCCAACCTGGACTGGCTGCGTGCCAAGCTCGACCCCCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS CCA 72 bp TGGACGGCAGTCAGCCTGAGGTCCCACTGCGCCATTTaGGAGAAGATGCTGCGCAAGGCGCCCCTCGTTGGC +
Preference number: 6 (lower is better)
Translates to: WTAVSLRSHCAI*EKMLRKAPLVG
Trigger: GCCAACGAGGGGCGCCTTGCGCAGCATCTTCTCCCAAATGGCGCAGTGGGACCTCAGGCTGACTGCCGTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431781.2
CDS CAA 72 bp GAGACTGAGGGCGAGGGTCCCAGTACGTATACCTCGTaGGCGGCCAGCGTCACTCGCCTCAGGCGGAACAGC +
Preference number: 6 (lower is better)
Translates to: ETEGEGPSTYTS*AASVTRLRRNS
Trigger: GCTGTTCCGCCTGAGGCGAGTGACGCTGGCCGCCAACGAGGTATACGTACTGGGACCCTCGCCCTCAGTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS CCA 72 bp AGACTGAGGGCGAGGGTCCCAGTACGTATACCTCGTTaGCGGCCAGCGTCACTCGCCTCAGGCGGAACAGCT +
Preference number: 6 (lower is better)
Translates to: RLRARVPVRIPR*RPASLASGGTA
Trigger: AGCTGTTCCGCCTGAGGCGAGTGACGCTGGCCGCCAACGAGGTATACGTACTGGGACCCTCGCCCTCAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374135.9
ENST00000431781.2
CDS TCA 72 bp TTGGCGGCCAGCGTCACTCGCCTCAGGCGGAACAGCTaGGACCGTGTCGCGCAAAAGGAGATAACAGGCCGA +
Preference number: 6 (lower is better)
Translates to: LAASVTRLRRNS*DRVAQKEITGR
Trigger: TCGGCCTGTTATCTCCTTTTGCGCGACACGGTCTCAGCTGTTCCGCCTGAGGCGAGTGACGCTGGCCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS GCA 72 bp TTTGGGAGAAGATGCTGCGCAAGGCGCCGTGATGCGTaGAGAGCTCCACCTGGCCTGGGCAGTCGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: FGRRCCARRRDA*RAPPGLGSRRG
Trigger: TCCTCTTCGACTGCCCAGGCCAGGTGGAGCTCTGCACGCATCACGGCGCCTTGCGCAGCATCTTCTCCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374135.9
CDS CCA 72 bp CTGCTCTCCAGGGTCCACCTTGTTGCTACAGCTGCATaGCTTCCTGCTCCACTGACTGGTTCGAGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: LLSRVHLVATAA*LPAPLTGSRVP
Trigger: TGGCACCCTCGAACCAGTCAGTGGAGCAGGAAGCCATGCAGCTGTAGCAACAAGGTGGACCCTGGAGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS GCA 72 bp CATCCTGCTCTCCAGGGTCCACCTTGTTGCTACAGCTaGATGGCTTCCTGCTCCACTGACTGGTTCGAGGGT +
Preference number: 6 (lower is better)
Translates to: HPALQGPPCCYS*MASCSTDWFEG
Trigger: ACCCTCGAACCAGTCAGTGGAGCAGGAAGCCATGCAGCTGTAGCAACAAGGTGGACCCTGGAGAGCAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS CCA 72 bp TGTTGCTACAGCTGCATGGCTTCCTGCTCCACTGACTaGTTCGAGGGTGCCAGGTACTTCTCCTGGATGCCC +
Preference number: 6 (lower is better)
Translates to: CCYSCMASCSTD*FEGARYFSWMP
Trigger: GGGCATCCAGGAGAAGTACCTGGCACCCTCGAACCAGTCAGTGGAGCAGGAAGCCATGCAGCTGTAGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS CAA 90 bp TCTCCTGGATGCCCAGTGTGGAAGAGAAATGGAAGTCGGCTCCCATaGCGGCAGACATCATGGCTTCCAAGCTTCGCTGCTCTTGGGCTC +
Preference number: 6 (lower is better)
Translates to: SPGCPVWKRNGSRLP*RQTSWLPSFAALGL
Trigger: GAGCCCAAGAGCAGCGAAGCTTGGAAGCCATGATGTCTGCCGCAATGGGAGCCGACTTCCATTTCTCTTCCACACTGGGCATCCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS GCA 72 bp GCCCAGTGTGGAAGAGAAATGGAAGTCGGCTCCCATTaGGGCAGACATCATGGCTTCCAAGCTTCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: AQCGREMEVGSH*GRHHGFQASLL
Trigger: GAGCAGCGAAGCTTGGAAGCCATGATGTCTGCCGCAATGGGAGCCGACTTCCATTTCTCTTCCACACTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS TCA 72 bp ACCTTGTTGCTACAGCTGCATGGCTTCCTGCTCCACTaGCTGGTTCGAGGGTGCCAGGTACTTCTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: TLLLQLHGFLLH*LVRGCQVLLLD
Trigger: ATCCAGGAGAAGTACCTGGCACCCTCGAACCAGTCAGTGGAGCAGGAAGCCATGCAGCTGTAGCAACAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS GCA 72 bp TGGATTATGCATCCTGCTCTCCAGGGTCCACCTTGTTaGTACAGCTGCATGGCTTCCTGCTCCACTGACTGG +
Preference number: 6 (lower is better)
Translates to: WIMHPALQGPPC*YSCMASCSTDW
Trigger: CCAGTCAGTGGAGCAGGAAGCCATGCAGCTGTAGCAACAAGGTGGACCCTGGAGAGCAGGATGCATAATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS GCA 72 bp GAGCCTCCACTTTCCCCAGTGCTGGATTATGCATCCTaGTCTCCAGGGTCCACCTTGTTGCTACAGCTGCAT +
Preference number: 6 (lower is better)
Translates to: EPPLSPVLDYAS*SPGSTLLLQLH
Trigger: ATGCAGCTGTAGCAACAAGGTGGACCCTGGAGAGCAGGATGCATAATCCAGCACTGGGGAAAGTGGAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS CAA 72 bp TGCCCAGTGTGGAAGAGAAATGGAAGTCGGCTCCCATaGCGGCAGACATCATGGCTTCCAAGCTTCGCTGCT +
Preference number: 6 (lower is better)
Translates to: CPVWKRNGSRLP*RQTSWLPSFAA
Trigger: AGCAGCGAAGCTTGGAAGCCATGATGTCTGCCGCAATGGGAGCCGACTTCCATTTCTCTTCCACACTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS CAA 90 bp GGCTCCCATTGCGGCAGACATCATGGCTTCCAAGCTTCGCTGCTCTaGGGCTCTGAAACAGTATCCATTGGCTTTATCCACAGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: GSHCGRHHGFQASLL*GSETVSIGFIHSLQ
Trigger: CTGCAGGCTGTGGATAAAGCCAATGGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTTGGAAGCCATGATGTCTGCCGCAATGGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS CAA 90 bp ATGGCTTCCAAGCTTCGCTGCTCTTGGGCTCTGAAACAGTATCCATaGGCTTTATCCACAGCCTGCAGGACTCGCTGGATGCTCTCCTTG +
Preference number: 6 (lower is better)
Translates to: MASKLRCSWALKQYP*ALSTACRTRWMLSL
Trigger: CAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAATGGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTTGGAAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS GCA 72 bp GCTCTGAAACAGTATCCATTGGCTTTATCCACAGCCTaGAGGACTCGCTGGATGCTCTCCTTGTCCTGGATG +
Preference number: 6 (lower is better)
Translates to: ALKQYPLALSTA*RTRWMLSLSWM
Trigger: CATCCAGGACAAGGAGAGCATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAATGGATACTGTTTCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS CAA 72 bp AAGCTTCGCTGCTCTTGGGCTCTGAAACAGTATCCATaGGCTTTATCCACAGCCTGCAGGACTCGCTGGATG +
Preference number: 6 (lower is better)
Translates to: KLRCSWALKQYP*ALSTACRTRWM
Trigger: CATCCAGCGAGTCCTGCAGGCTGTGGATAAAGCCAATGGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS GCA 72 bp CCCATTGCGGCAGACATCATGGCTTCCAAGCTTCGCTaGTCTTGGGCTCTGAAACAGTATCCATTGGCTTTA +
Preference number: 6 (lower is better)
Translates to: PIAADIMASKLR*SWALKQYPLAL
Trigger: TAAAGCCAATGGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTTGGAAGCCATGATGTCTGCCGCAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS CCA 72 bp GCGGCAGACATCATGGCTTCCAAGCTTCGCTGCTCTTaGGCTCTGAAACAGTATCCATTGGCTTTATCCACA +
Preference number: 6 (lower is better)
Translates to: AADIMASKLRCS*ALKQYPLALST
Trigger: TGTGGATAAAGCCAATGGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTTGGAAGCCATGATGTCTGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2
CDS TCA 72 bp ACATCATGGCTTCCAAGCTTCGCTGCTCTTGGGCTCTaGAACAGTATCCATTGGCTTTATCCACAGCCTGCA +
Preference number: 6 (lower is better)
Translates to: TSWLPSFAALGL*NSIHWLYPQPA
Trigger: TGCAGGCTGTGGATAAAGCCAATGGATACTGTTTCAGAGCCCAAGAGCAGCGAAGCTTGGAAGCCATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374133.3
ENST00000374135.9
ENST00000477418.2