RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GPATCH8 (Homo sapiens)

Ensembl gene IDs: ENSG00000186566

Ensembl transcript IDs: ENST00000585614.1, ENST00000586037.5, ENST00000586265.5, ENST00000587228.5, ENST00000588554.1, ENST00000590041.5, ENST00000591680.6, ENST00000592154.1, ENST00000592746.5, ENST00000635257.1

Found 721 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTTCCTGGAGCCTGATCTCTGGGAAGGGCTCCTGGTGCTGCGGCTaGGGTCCCGGCTATAGCTCCGGCTCCGTTGCCAGCTGTGGGCTG +
Preference number: 1 (lower is better)
Translates to: SSWSLISGKGSWCCG*GPGYSSGSVASCGL
Trigger: CAGCCCACAGCTGGCAACGGAGCCGGAGCTATAGCCGGGACCGCAGCCGCAGCACCAGGAGCCCTTCCCAGAGATCAGGCTCCAGGAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp CCCATGATCTCTTCCTGGAGCCTGATCTCTGGGAAGGGCTCCTGGTaGTGCGGCTGCGGTCCCGGCTATAGCTCCGGCTCCGTTGCCAGC +
Preference number: 1 (lower is better)
Translates to: PMISSWSLISGKGSW*CGCGPGYSSGSVAS
Trigger: GCTGGCAACGGAGCCGGAGCTATAGCCGGGACCGCAGCCGCAGCACCAGGAGCCCTTCCCAGAGATCAGGCTCCAGGAAGAGATCATGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp ATGATCTCTTCCTGGAGCCTGATCTCTGGGAAGGGCTCCTGGTGCTaGGGCTGCGGTCCCGGCTATAGCTCCGGCTCCGTTGCCAGCTGT +
Preference number: 1 (lower is better)
Translates to: MISSWSLISGKGSWC*GCGPGYSSGSVASC
Trigger: ACAGCTGGCAACGGAGCCGGAGCTATAGCCGGGACCGCAGCCGCAGCACCAGGAGCCCTTCCCAGAGATCAGGCTCCAGGAAGAGATCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 90 bp CTGCTCCCCTCTTCAGCTGGGAGGGATCTCCGCTGGGAGTCATCTTaGGCTCTCCGCCTTCTTCTTGGTGGTGCGGGACTGCCACTCCCA +
Preference number: 1 (lower is better)
Translates to: LLPSSAGRDLRWESS*ALRLLLGGAGLPLP
Trigger: TGGGAGTGGCAGTCCCGCACCACCAAGAAGAAGGCGGAGAGCTCAAGATGACTCCCAGCGGAGATCCCTCCCAGCTGAAGAGGGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 90 bp TCGACTACGACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTTaGGCGCTCTCTGGTATGACTCCGAGATCGGCTTCGGGACTGGCT +
Preference number: 1 (lower is better)
Translates to: STTTTTAAAAAAPGS*ALSGMTPRSASGLA
Trigger: AGCCAGTCCCGAAGCCGATCTCGGAGTCATACCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTAGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp CTCCCTGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTaGTTGTTCAGGCCGCTACAGGCAGACCCTGAAGCAGGTGCGTCC +
Preference number: 1 (lower is better)
Translates to: LPVSSVSDPWLPPGS*LFRPLQADPEAGAS
Trigger: GGACGCACCTGCTTCAGGGTCTGCCTGTAGCGGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp GGATCTCCGCTGGGAGTCATCTTGAGCTCTCCGCCTTCTTCTTGGTaGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCG +
Preference number: 1 (lower is better)
Translates to: GSPLGVILSSPPSSW*CGTATPRGFWFGSS
Trigger: CGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCACCAAGAAGAAGGCGGAGAGCTCAAGATGACTCCCAGCGGAGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp CAGAATGCCTCTCCTCAGGGCTCTCGTGACCCCATGATCTCTTCCTaGAGCCTGATCTCTGGGAAGGGCTCCTGGTGCTGCGGCTGCGGT +
Preference number: 1 (lower is better)
Translates to: QNASPQGSRDPMISS*SLISGKGSWCCGCG
Trigger: ACCGCAGCCGCAGCACCAGGAGCCCTTCCCAGAGATCAGGCTCCAGGAAGAGATCATGGGGTCACGAGAGCCCTGAGGAGAGGCATTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp TCTCCGCTGGGAGTCATCTTGAGCTCTCCGCCTTCTTCTTGGTGGTaGGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTC +
Preference number: 1 (lower is better)
Translates to: SPLGVILSSPPSSWW*GTATPRGFWFGSSF
Trigger: GAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCACCAAGAAGAAGGCGGAGAGCTCAAGATGACTCCCAGCGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp TGGTGCTACGGCTTCTCCGCTTGCTTCGACTACGACTACAACTGCTaGTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGTATGAC +
Preference number: 1 (lower is better)
Translates to: WCYGFSACFDYDYNC*CGCGPGILSALWYD
Trigger: GTCATACCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTAGTCGAAGCAAGCGGAGAAGCCGTAGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp CTGTGGTGCTACGGCTTCTCCGCTTGCTTCGACTACGACTACAACTaGTGCTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGTAT +
Preference number: 1 (lower is better)
Translates to: LWCYGFSACFDYDYN*CCGCGPGILSALWY
Trigger: ATACCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTAGTCGAAGCAAGCGGAGAAGCCGTAGCACCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp GGGAGGAACGATGCGAGGAATGGCGCCGGCCAGACCTTGAGCGGCTaGGGGAATGCTCACTGCCTGAATCTTCCTCTTCTTCTTCCTCAC +
Preference number: 1 (lower is better)
Translates to: GRNDARNGAGQTLSG*GNAHCLNLPLLLPH
Trigger: GTGAGGAAGAAGAAGAGGAAGATTCAGGCAGTGAGCATTCCCGCAGCCGCTCAAGGTCTGGCCGGCGCCATTCCTCGCATCGTTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp CTCAAGGTCTGGTGCTATAGGCAGCAAGCTGGACTCCACAGGGCCTaGCTGACTGCTGCTATCCAGGGACTCCAGGGTGTCCCCATCACT +
Preference number: 1 (lower is better)
Translates to: LKVWCYRQQAGLHRA*LTAAIQGLQGVPIT
Trigger: AGTGATGGGGACACCCTGGAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCTATAGCACCAGACCTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp TTCTTGCTGGGAAGGCTTCTCCCTGTGTCTTCTGTCTCAGACCCATaGCTACCCCCAGGCTCCTGCTTGTTCAGGCCGCTACAGGCAGAC +
Preference number: 1 (lower is better)
Translates to: FLLGRLLPVSSVSDP*LPPGSCLFRPLQAD
Trigger: GTCTGCCTGTAGCGGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACAGGGAGAAGCCTTCCCAGCAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 90 bp GATGGGATGGCTAGCGAGAAAGGTGGCAGGGTGGCCAGGGATGATTaGGTGAGTGAGGTGGGACAAAGAAATGGGGGTCAGATGGGGCTG +
Preference number: 1 (lower is better)
Translates to: DGMASEKGGRVARDD*VSEVGQRNGGQMGL
Trigger: CAGCCCCATCTGACCCCCATTTCTTTGTCCCACCTCACTCACTCAATCATCCCTGGCCACCCTGCCACCTTTCTCGCTAGCCATCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp ATCCCCACTGGGAGGTGCATAACTGGGGAAATGCTCAAGGTCTGGTaGTATAGGCAGCAAGCTGGACTCCACAGGGCCTGGCTGACTGCT +
Preference number: 1 (lower is better)
Translates to: IPTGRCITGEMLKVW*YRQQAGLHRAWLTA
Trigger: AGCAGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCTATAGCACCAGACCTTGAGCATTTCCCCAGTTATGCACCTCCCAGTGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp GAAGCATCATCACTATCCTCATCTCCACTACTGGGTTGGCTCCGATaGCTAGACCGGCTGCTCCGTTTGGTGCCTGCTCTTCGCTGGCAG +
Preference number: 1 (lower is better)
Translates to: EASSLSSSPLLGWLR*LDRLLRLVPALRWQ
Trigger: CTGCCAGCGAAGAGCAGGCACCAAACGGAGCAGCCGGTCTAGCCATCGGAGCCAACCCAGTAGTGGAGATGAGGATAGTGATGATGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp AGGATCCCCACTGGGAGGTGCATAACTGGGGAAATGCTCAAGGTCTaGTGCTATAGGCAGCAAGCTGGACTCCACAGGGCCTGGCTGACT +
Preference number: 1 (lower is better)
Translates to: RIPTGRCITGEMLKV*CYRQQAGLHRAWLT
Trigger: AGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCTATAGCACCAGACCTTGAGCATTTCCCCAGTTATGCACCTCCCAGTGGGGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 90 bp GCTAGACCGGCTGCTCCGTTTGGTGCCTGCTCTTCGCTGGCAGGATaGAGGTGGAAGTTCACCTTTGTGTTTCCTCCCACCATGGTCTTG +
Preference number: 1 (lower is better)
Translates to: ARPAAPFGACSSLAG*RWKFTFVFPPTMVL
Trigger: CAAGACCATGGTGGGAGGAAACACAAAGGTGAACTTCCACCTTCATCCTGCCAGCGAAGAGCAGGCACCAAACGGAGCAGCCGGTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp TGTTCAGGCCGCTACAGGCAGACCCTGAAGCAGGTGCGTCCATTCTaGCTCCTGAGGAACGTACTATTTTCTCTCCGCCCACTTCCTTGC +
Preference number: 1 (lower is better)
Translates to: CSGRYRQTLKQVRPF*LLRNVLFSLRPLPC
Trigger: GCAAGGAAGTGGGCGGAGAGAAAATAGTACGTTCCTCAGGAGGCAGAATGGACGCACCTGCTTCAGGGTCTGCCTGTAGCGGCCTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp CGGTGTGAGGAAGCATCATCACTATCCTCATCTCCACTACTGGGTTaGCTCCGATGGCTAGACCGGCTGCTCCGTTTGGTGCCTGCTCTT +
Preference number: 1 (lower is better)
Translates to: RCEEASSLSSSPLLG*LRWLDRLLRLVPAL
Trigger: AAGAGCAGGCACCAAACGGAGCAGCCGGTCTAGCCATCGGAGCCAACCCAGTAGTGGAGATGAGGATAGTGATGATGCTTCCTCACACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 90 bp AAGGCCTTTACTTGCTTGGCCAGAAGCTGCTGCTGGATGTGTTGCTaGGCAGCCTGCTGGAGCTTGCTGTACTTCTCCATCTCCTCAGGG +
Preference number: 1 (lower is better)
Translates to: KAFTCLARSCCWMCC*AACWSLLYFSISSG
Trigger: CCCTGAGGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTGCTCAGCAACACATCCAGCAGCAGCTTCTGGCCAAGCAAGTAAAGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp TTCTTCTTGGTGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTaGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCT +
Preference number: 1 (lower is better)
Translates to: FFLVVRDCHSQGVLV*VLVQNLLGLMTYSS
Trigger: AGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCACCAAGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp GCTGGTTTCCTTCGGCTGCTCAGAGACTTCACTAACTGTCTTTTCTaGTCCTTGGCTTGCTGCCGCCTTGATGCAGCTTTTAGGCTTGGG +
Preference number: 1 (lower is better)
Translates to: AGFLRLLRDFTNCLF*SLACCRLDAAFRLG
Trigger: CCCAAGCCTAAAAGCTGCATCAAGGCGGCAGCAAGCCAAGGAGCAGAAAAGACAGTTAGTGAAGTCTCTGAGCAGCCGAAGGAAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp TGGCAGGATGAAGGTGGAAGTTCACCTTTGTGTTTCCTCCCACCATaGTCTTGGGAGCTGCTACCACCCCCACCTTCATCCTTTTTGCCA +
Preference number: 1 (lower is better)
Translates to: WQDEGGSSPLCFLPP*SWELLPPPPSSFLP
Trigger: TGGCAAAAAGGATGAAGGTGGGGGTGGTAGCAGCTCCCAAGACCATGGTGGGAGGAAACACAAAGGTGAACTTCCACCTTCATCCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 90 bp TTCTTCCTCACTGTACTGGGATGGAGACTTCTGGTGCAGCCGGTGTaGGGAAGCATCATCACTATCCTCATCTCCACTACTGGGTTGGCT +
Preference number: 1 (lower is better)
Translates to: FFLTVLGWRLLVQPV*GSIITILISTTGLA
Trigger: AGCCAACCCAGTAGTGGAGATGAGGATAGTGATGATGCTTCCTCACACCGGCTGCACCAGAAGTCTCCATCCCAGTACAGTGAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp CTTCAGGACTGCAGTCACCTTCTGACCCTCTTCCTGTGCCAATGTTaGTGTTCTGGGAAGGTGGACCTGTTGCTTTACTGTCATCTCCTC +
Preference number: 1 (lower is better)
Translates to: LQDCSHLLTLFLCQC*CSGKVDLLLYCHLL
Trigger: GAGGAGATGACAGTAAAGCAACAGGTCCACCTTCCCAGAACAGCAACATTGGCACAGGAAGAGGGTCAGAAGGTGACTGCAGTCCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp TCCTTCGGCTGCTCAGAGACTTCACTAACTGTCTTTTCTGCTCCTTaGCTTGCTGCCGCCTTGATGCAGCTTTTAGGCTTGGGAGAACTG +
Preference number: 1 (lower is better)
Translates to: SFGCSETSLTVFSAP*LAAALMQLLGLGEL
Trigger: CAGTTCTCCCAAGCCTAAAAGCTGCATCAAGGCGGCAGCAAGCCAAGGAGCAGAAAAGACAGTTAGTGAAGTCTCTGAGCAGCCGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp ACCCACCCCTGCAAGCCAAAACTCAATTCTTTGGCTGTCAGACACTaGCCATCCCAGCTTCTACTTGCTGGTATTAATGGCTCAACACCC +
Preference number: 1 (lower is better)
Translates to: THPCKPKLNSLAVRH*PSQLLLAGINGSTP
Trigger: GGGTGTTGAGCCATTAATACCAGCAAGTAGAAGCTGGGATGGGCAGTGTCTGACAGCCAAAGAATTGAGTTTTGGCTTGCAGGGGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
3UTR GCA 90 bp CAGTGCCAAATGTGTGGCTCCGTTGATGTGGGAACTGGATGGAATTaGAGCCTGAGTTATATCAGGTTCCAGGTGAGACGCTTTCCACCT +
Preference number: 1 (lower is better)
Translates to: QCQMCGSVDVGTGWN*SLSYIRFQVRRFPP
Trigger: AGGTGGAAAGCGTCTCACCTGGAACCTGATATAACTCAGGCTGCAATTCCATCCAGTTCCCACATCAACGGAGCCACACATTTGGCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR GCA 90 bp TCTTTTTCTTTTTGTGCCGGTGGGACTTCCCAGATCGTTCTTTCTTaGTGGGAAGGCTTCTCCCTGTGTCTTCTGTCTCAGACCCATGGC +
Preference number: 1 (lower is better)
Translates to: SFSFCAGGTSQIVLS*WEGFSLCLLSQTHG
Trigger: GCCATGGGTCTGAGACAGAAGACACAGGGAGAAGCCTTCCCAGCAAGAAAGAACGATCTGGGAAGTCCCACCGGCACAAAAAGAAAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp TTCTTAATGCCAAAGCTGATGCCTTGGGAGGCTAACCCAGGAGCCTaGGCCAGTCCAGTGGTATTAGTGATTTGTACTGCAGTGAAAGGG +
Preference number: 1 (lower is better)
Translates to: FLMPKLMPWEANPGA*ASPVVLVICTAVKG
Trigger: CCCTTTCACTGCAGTACAAATCACTAATACCACTGGACTGGCCCAGGCTCCTGGGTTAGCCTCCCAAGGCATCAGCTTTGGCATTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp TTTTCTTTTTGTGCCGGTGGGACTTCCCAGATCGTTCTTTCTTGCTaGGAAGGCTTCTCCCTGTGTCTTCTGTCTCAGACCCATGGCTAC +
Preference number: 1 (lower is better)
Translates to: FSFCAGGTSQIVLSC*EGFSLCLLSQTHGY
Trigger: GTAGCCATGGGTCTGAGACAGAAGACACAGGGAGAAGCCTTCCCAGCAAGAAAGAACGATCTGGGAAGTCCCACCGGCACAAAAAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp GTTTGGAGCTGGCATAGTCTGAGTCATCTGAGTCATGGGAGCGCTTaGAGTGCCTTCGTGATCTGTCACTGTAGTCACTGTAGCTGTCAT +
Preference number: 1 (lower is better)
Translates to: VWSWHSLSHLSHGSA*SAFVICHCSHCSCH
Trigger: ATGACAGCTACAGTGACTACAGTGACAGATCACGAAGGCACTCCAAGCGCTCCCATGACTCAGATGACTCAGACTATGCCAGCTCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 90 bp TCTCCACTTTCCTTGACTGGATCTTCTCCAGTAGCAGTTTGGCAGTaGCAGAGTTCTTGTCTTCAGGACTGCAGTCACCTTCTGACCCTC +
Preference number: 1 (lower is better)
Translates to: SPLSLTGSSPVAVWQ*QSSCLQDCSHLLTL
Trigger: GAGGGTCAGAAGGTGACTGCAGTCCTGAAGACAAGAACTCTGTCACTGCCAAACTGCTACTGGAGAAGATCCAGTCAAGGAAAGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp TTCTGCCTCCTGAGGAACGTACTATTTTCTCTCCGCCCACTTCCTTaGTTTTATTTGGCTCACCAGGATCTAGGCCTTGGAGATGGTCCT +
Preference number: 1 (lower is better)
Translates to: FCLLRNVLFSLRPLP*FYLAHQDLGLGDGP
Trigger: AGGACCATCTCCAAGGCCTAGATCCTGGTGAGCCAAATAAAAGCAAGGAAGTGGGCGGAGAGAAAATAGTACGTTCCTCAGGAGGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp AGTTCTTGTCTTCAGGACTGCAGTCACCTTCTGACCCTCTTCCTGTaGCAATGTTGCTGTTCTGGGAAGGTGGACCTGTTGCTTTACTGT +
Preference number: 1 (lower is better)
Translates to: SSCLQDCSHLLTLFL*QCCCSGKVDLLLYC
Trigger: ACAGTAAAGCAACAGGTCCACCTTCCCAGAACAGCAACATTGGCACAGGAAGAGGGTCAGAAGGTGACTGCAGTCCTGAAGACAAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp CTCAAAACTGGGAAGAAGGGACCAGTAGGATGTTTGGGTCCTTCTTaGCTTTCTTTCCCTGCTGGGGTGGCCAGAGAGGTTTCTTTAGAA +
Preference number: 1 (lower is better)
Translates to: LKTGKKGPVGCLGPS*LSFPAGVAREVSLE
Trigger: TTCTAAAGAAACCTCTCTGGCCACCCCAGCAGGGAAAGAAAGCCAAGAAGGACCCAAACATCCTACTGGTCCCTTCTTCCCAGTTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 90 bp GCTCTCTGGTATGACTCCGAGATCGGCTTCGGGACTGGCTGCAACTaGGGCTATAGTCATCATCAGAAGATGAATATTTGTGCCGTTTTG +
Preference number: 1 (lower is better)
Translates to: ALWYDSEIGFGTGCN*GYSHHQKMNICAVL
Trigger: CAAAACGGCACAAATATTCATCTTCTGATGATGACTATAGCCTCAGTTGCAGCCAGTCCCGAAGCCGATCTCGGAGTCATACCAGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp TTCGTGATCTGTCACTGTAGTCACTGTAGCTGTCATCAGAGTAACTaGGCTGTCTACTATAGCAGCTCTGGTCTGAAGAGGCATCTGAGC +
Preference number: 1 (lower is better)
Translates to: FVICHCSHCSCHQSN*AVYYSSSGLKRHLS
Trigger: GCTCAGATGCCTCTTCAGACCAGAGCTGCTATAGTAGACAGCGCAGTTACTCTGATGACAGCTACAGTGACTACAGTGACAGATCACGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp CATCAGAAGATGAATATTTGTGCCGTTTTGATCGGTGTTTGGAGCTaGCATAGTCTGAGTCATCTGAGTCATGGGAGCGCTTGGAGTGCC +
Preference number: 1 (lower is better)
Translates to: HQKMNICAVLIGVWS*HSLSHLSHGSAWSA
Trigger: GGCACTCCAAGCGCTCCCATGACTCAGATGACTCAGACTATGCCAGCTCCAAACACCGATCAAAACGGCACAAATATTCATCTTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 90 bp GGGATGAGGGATACCAAGATAACAGTGCCAAATGTGTGGCTCCGTTaGTGTGGGAACTGGATGGAATTGCAGCCTGAGTTATATCAGGTT +
Preference number: 1 (lower is better)
Translates to: GMRDTKITVPNVWLR*CGNWMELQPELYQV
Trigger: AACCTGATATAACTCAGGCTGCAATTCCATCCAGTTCCCACATCAACGGAGCCACACATTTGGCACTGTTATCTTGGTATCCCTCATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR TCA 90 bp AGTGCTAGTTATCCAAGAAGTGATGCTTCTGAATCAGATGAGTACTaGACAGGTAGGAGGGTGGGAGGGCAGTCAAGAGTTGTGTTTGCC +
Preference number: 1 (lower is better)
Translates to: SASYPRSDASESDEY*TGRRVGGQSRVVFA
Trigger: GGCAAACACAACTCTTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCATCACTTCTTGGATAACTAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR CCA 90 bp GAAGTGATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTaGGAGGGCAGTCAAGAGTTGTGTTTGCCTGCCACTTTCTTTTCA +
Preference number: 1 (lower is better)
Translates to: EVMLLNQMSTEQVGG*EGSQELCLPATFFS
Trigger: TGAAAAGAAAGTGGCAGGCAAACACAACTCTTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCATCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR CCA 90 bp TCAAGATTACTGCTCCCATCAGAGTCTCCTACCTTCTGCAGTCCTTaGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGTC +
Preference number: 1 (lower is better)
Translates to: SRLLLPSESPTFCSP*SELFSSGFVPSSEV
Trigger: GACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTCTGATGGGAGCAGTAATCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp CCGCCCACTTCCTTGCTTTTATTTGGCTCACCAGGATCTAGGCCTTaGAGATGGTCCTTTGAGGAGCTTCCTATATCCTTTGGTTTTTCT +
Preference number: 1 (lower is better)
Translates to: PPTSLLLFGSPGSRP*RWSFEELPISFGFS
Trigger: AGAAAAACCAAAGGATATAGGAAGCTCCTCAAAGGACCATCTCCAAGGCCTAGATCCTGGTGAGCCAAATAAAAGCAAGGAAGTGGGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp ATGGAGGGTTCTGCCTTGGTGAAAATTAATAGTTCTGATGGCCACTaGAGGGCAGTGCTTTCATCTTTGCTCAAAACTGGGAAGAAGGGA +
Preference number: 1 (lower is better)
Translates to: MEGSALVKINSSDGH*RAVLSSLLKTGKKG
Trigger: TCCCTTCTTCCCAGTTTTGAGCAAAGATGAAAGCACTGCCCTCCAGTGGCCATCAGAACTATTAATTTTCACCAAGGCAGAACCCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp AGTCATCATCAGAAGATGAATATTTGTGCCGTTTTGATCGGTGTTTaGAGCTGGCATAGTCTGAGTCATCTGAGTCATGGGAGCGCTTGG +
Preference number: 1 (lower is better)
Translates to: SHHQKMNICAVLIGV*SWHSLSHLSHGSAW
Trigger: CCAAGCGCTCCCATGACTCAGATGACTCAGACTATGCCAGCTCCAAACACCGATCAAAACGGCACAAATATTCATCTTCTGATGATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 90 bp TTTTTACCATCAAGATTACTGCTCCCATCAGAGTCTCCTACCTTCTaGAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCT +
Preference number: 1 (lower is better)
Translates to: FLPSRLLLPSESPTF*SPWSELFSSGFVPS
Trigger: AGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTCTGATGGGAGCAGTAATCTTGATGGTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp GGCCATACAGCTTTTATTCATGATAGGATCTTCTTTTCTGGGATATaGAGATGCCTCTTCTGGGATGAGGGATACCAAGATAACAGTGCC +
Preference number: 1 (lower is better)
Translates to: GHTAFIHDRIFFSGI*RCLFWDEGYQDNSA
Trigger: GGCACTGTTATCTTGGTATCCCTCATCCCAGAAGAGGCATCTCCATATCCCAGAAAAGAAGATCCTATCATGAATAAAAGCTGTATGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR CCA 90 bp ACTTCCTTGCTTTTATTTGGCTCACCAGGATCTAGGCCTTGGAGATaGTCCTTTGAGGAGCTTCCTATATCCTTTGGTTTTTCTGTTCCT +
Preference number: 1 (lower is better)
Translates to: TSLLLFGSPGSRPWR*SFEELPISFGFSVP
Trigger: AGGAACAGAAAAACCAAAGGATATAGGAAGCTCCTCAAAGGACCATCTCCAAGGCCTAGATCCTGGTGAGCCAAATAAAAGCAAGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 90 bp AACCAACCAATTCTAGCCACACGAATAGTTAGGAAAATGCCAAAGTaGGAATTGTTAACCTCATCAAAGGAGATGGGACCTGCAACACAA +
Preference number: 1 (lower is better)
Translates to: NQPILATRIVRKMPK*ELLTSSKEMGPATQ
Trigger: TTGTGTTGCAGGTCCCATCTCCTTTGATGAGGTTAACAATTCCCACTTTGGCATTTTCCTAACTATTCGTGTGGCTAGAATTGGTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR GCA 90 bp ACAGCTTTTATTCATGATAGGATCTTCTTTTCTGGGATATGGAGATaGCTCTTCTGGGATGAGGGATACCAAGATAACAGTGCCAAATGT +
Preference number: 1 (lower is better)
Translates to: TAFIHDRIFFSGIWR*LFWDEGYQDNSAKC
Trigger: ACATTTGGCACTGTTATCTTGGTATCCCTCATCCCAGAAGAGGCATCTCCATATCCCAGAAAAGAAGATCCTATCATGAATAAAAGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR GCA 90 bp TTTGCCTGCCACTTTCTTTTCATAAACTTTACTCTTTTGAGAATTTaGGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTATGGTTTTT +
Preference number: 1 (lower is better)
Translates to: FACHFLFINFTLLRI*EGRNRALAQVSMVF
Trigger: AAAAACCATACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAAGTTTATGAAAAGAAAGTGGCAGGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR TCA 90 bp GTTTCTGATATTGCTTATCACACAGTTCACAATAAAAGTTGGCTCTaGGGTCTTCCAAGGCTTTGGCAATTGCCTTCTCTTTGTCAACAT +
Preference number: 1 (lower is better)
Translates to: VSDIAYHTVHNKSWL*GLPRLWQLPSLCQH
Trigger: ATGTTGACAAAGAGAAGGCAATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTGTGTGATAAGCAATATCAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
3UTR CCA 90 bp TCATGGGAGAAAAGAAACAAGGAACGTTTACTGTCTAAACTGAGCTaGGCAGAGGGCATGGAAACTATGAAGCAAAATATCTGTAAATGT +
Preference number: 1 (lower is better)
Translates to: SWEKRNKERLLSKLS*AEGMETMKQNICKC
Trigger: ACATTTACAGATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAAACGTTCCTTGTTTCTTTTCTCCCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR TCA 90 bp GCTTCAGATCTTTTAATCTCTGCTTGTGTGCATGATCATAGGAGTTaGTATGGTTATCAAATTCCTGATGTTTCTGATATTGCTTATCAC +
Preference number: 1 (lower is better)
Translates to: ASDLLISACVHDHRS*YGYQIPDVSDIAYH
Trigger: GTGATAAGCAATATCAGAAACATCAGGAATTTGATAACCATATCAACTCCTATGATCATGCACACAAGCAGAGATTAAAAGATCTGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
3UTR-3UTR CCA 90 bp TACGACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGGAACGATGCGAGGAATaGCGCCGGCCAGACCTTGAG +
Preference number: 2 (lower is better)
Translates to: YDYNCCCGCGPGILSALWERCEE*RRPDLE
Trigger: CTCAAGGTCTGGCCGGCGCCATTCCTCGCATCGTTC...CCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp ACTGCTCCCCTCTTCAGCTGGGAGGGATCTCCGCTGGGAGTCATCTaGAGCTCTCCGCCTTCTTCTTGGTGGTGCGGGACTGCCACTCCC +
Preference number: 2 (lower is better)
Translates to: TAPLFSWEGSPLGVI*SSPPSSWWCGTATP
Trigger: GGGAGTGGCAGTCCCGCACCACCAAGAAGAAGGCGGAGAGCTCAAGATGACTCCCAGCGGAGATCCCTCCCAGCTGAAGAGGGGAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp TTCGACTACGACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTaGAGCGCTCTCTGGTATGACTCCGAGATCGGCTTCGGGACTGGC +
Preference number: 2 (lower is better)
Translates to: FDYDYNCCCGCGPGI*SALWYDSEIGFGTG
Trigger: GCCAGTCCCGAAGCCGATCTCGGAGTCATACCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTAGTCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR GCA 90 bp AGGCAGCAAGCTGGACTCCACAGGGCCTGGCTGACTGCTGCTATCCAGGGACTCCAGACCTTGAGCGGCTaGGGGAATGCTCACTGCCTG +
Preference number: 2 (lower is better)
Translates to: RQQAGLHRAWLTAAIQGLQTLSG*GNAHCL
Trigger: CAGGCAGTGAGCATTCCCGCAGCCGCTCAAGGTCTG...GAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp TACGACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGGCTAACCCAGGAGCCTaGGCCAGTCCAGTGGTATTA +
Preference number: 2 (lower is better)
Translates to: YDYNCCCGCGPGILSALWANPGA*ASPVVL
Trigger: TAATACCACTGGACTGGCCCAGGCTCCTGGGTTAGC...CCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp CCTGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTaGTTCAGGCCGCTACAGGCAGACCCTGAAGCAGGTGCGTCCATT +
Preference number: 2 (lower is better)
Translates to: PVSSVSDPWLPPGSC*FRPLQADPEAGASI
Trigger: AATGGACGCACCTGCTTCAGGGTCTGCCTGTAGCGGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp AAGAACGCCGGGAGGAACGATGCGAGGAATGGCGCCGGCCAGACCTaGAGCGGCTGCGGGAATGCTCACTGCCTGAATCTTCCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: KNAGRNDARNGAGQT*SGCGNAHCLNLPLL
Trigger: AAGAAGAGGAAGATTCAGGCAGTGAGCATTCCCGCAGCCGCTCAAGGTCTGGCCGGCGCCATTCCTCGCATCGTTCCTCCCGGCGTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR TCA 90 bp AGGCAGCAAGCTGGACTCCACAGGGCCTGGCTGACTGCTGCTATCCAGGGACTCTTTGCTTCCTGGTTCTaGGGGCTCGGTCATGCTGGT +
Preference number: 2 (lower is better)
Translates to: RQQAGLHRAWLTAAIQGLFASWF*GLGHAG
Trigger: ACCAGCATGACCGAGCCCTCAGAACCAGGAAGCAAA...GAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR TCA 90 bp AGGCAGCAAGCTGGACTCCACAGGGCCTGGCTGACTGCTGCTATCCAGGGACTCTCCTCTGAAGGGAACTaGTGCCCAAATAGGGCATCA +
Preference number: 2 (lower is better)
Translates to: RQQAGLHRAWLTAAIQGLSSEGN*CPNRAS
Trigger: TGATGCCCTATTTGGGCATCAGTTCCCTTCAGAGGA...GAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR GCA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTCCTTCTTCTTGGTGGTaGGGGACTGCCACTCCCAGG +
Preference number: 2 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGPSSWW*GTATPR
Trigger: CCTGGGAGTGGCAGTCCCGCACCACCAAGAAGAAGG...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR GCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCGCCGGGAGGAACGATaGGAGGAATGGCGCCGGCCA +
Preference number: 2 (lower is better)
Translates to: LAGINGSTPPREHLWVSSRREER*EEWRRP
Trigger: TGGCCGGCGCCATTCCTCGCATCGTTCCTCCCGGCG...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp CACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGCCAAGGGAACATTTATaGGTCTCCTCCCCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: HSQGVLVWVLVQNLLGLMPREHL*VSSPGP
Trigger: AGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGG...CATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp GACTCTTCTGGGGGTGGGTCTAATAAGGGGCCAGTTGTTTCCTCTGAAGGGAACACCGGCTGCTCCGTTTaGTGCCTGCTCTTCGCTGGC +
Preference number: 2 (lower is better)
Translates to: DSSGGGSNKGPVVSSEGNTGCSV*CLLFAG
Trigger: GCCAGCGAAGAGCAGGCACCAAACGGAGCAGCCGGT...GTTCCCTTCAGAGGAAACAACTGGCCCCTTATTAGACCCACCCCCAGAAGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp AGATGGGGTGAAGTAGTGGGTGAAGGTGAAGTGCAGTGGCAGCTGCTGCAGCAGTCTCCACTACTGGGTTaGCTCCGATGGCTAGACCGG +
Preference number: 2 (lower is better)
Translates to: RWGEVVGEGEVQWQLLQQSPLLG*LRWLDR
Trigger: CCGGTCTAGCCATCGGAGCCAACCCAGTAGTGGAGA...CTGCTGCAGCAGCTGCCACTGCACTTCACCTTCACCCACTACTTCACCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp GCTGTCTACTATAGCAGCTCTGGTCTGAAGAGGCATCTGAGCTACTaGAGTAAGAACGCCGGGAGGAACGATGCGAGGAATGGCGCCGGC +
Preference number: 2 (lower is better)
Translates to: AVYYSSSGLKRHLSY*SKNAGRNDARNGAG
Trigger: GCCGGCGCCATTCCTCGCATCGTTCCTCCCGGCGTTCTTACTCAAGTAGCTCAGATGCCTCTTCAGACCAGAGCTGCTATAGTAGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR GCA 90 bp TGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCGAGTCTCCTACCTTCTaGAGTCCTTGGTCAGAACTC +
Preference number: 2 (lower is better)
Translates to: WCGTATPRGFWFGSSFRIESPTF*SPWSEL
Trigger: GAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC...GATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp TGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCCGGCCACAAGAAGCAGTaGCACCTGTGCCACTATTTG +
Preference number: 2 (lower is better)
Translates to: CVFCLRPMATPRLLLVQAGHKKQ*HLCHYL
Trigger: CAAATAGTGGCACAGGTGCCACTGCTTCTTGTGGCC...GGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp TACGACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGTACTTTGCAGTGTGCTaGGGGGATGTAGTGGTAATA +
Preference number: 2 (lower is better)
Translates to: YDYNCCCGCGPGILSALWYFAVC*GDVVVI
Trigger: TATTACCACTACATCCCCCCAGCACACTGCAAAGTA...CCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp CTTCTTCTTGGTGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTaGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTC +
Preference number: 2 (lower is better)
Translates to: LLLGGAGLPLPGGSG*GPRSESAGADDLFF
Trigger: GAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCACCAAGAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR GCA 90 bp CACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTAACTGTCTTTTCTaGTCCTTGGCTTGCTGCCGC +
Preference number: 2 (lower is better)
Translates to: HSQGVLVWVLVQNLLGLMTNCLF*SLACCR
Trigger: GCGGCAGCAAGCCAAGGAGCAGAAAAGACAGTTAGT...CATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp CTTCCACCACTAGAACAGCTTGGCCTTCCCTGTGGCGCTGAGAAGGCAAGACCAGTTGCTGCAGAGGGGTaGGTAGCACTTACTGGTGTT +
Preference number: 2 (lower is better)
Translates to: LPPLEQLGLPCGAEKARPVAAEG*VALTGV
Trigger: AACACCAGTAAGTGCTACCCACCCCTCTGCAGCAAC...TGGTCTTGCCTTCTCAGCGCCACAGGGAAGGCCAAGCTGTTCTAGTGGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CCA 90 bp GACTCTTCTGGGGGTGGGTCTAATAAGGGGCCAGTTGTTTCCTCTGAAGGGAACAGGGCTCGGTCATGCTaGTTTCCTTCGGCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: DSSGGGSNKGPVVSSEGNRARSC*FPSAAQ
Trigger: CTGAGCAGCCGAAGGAAACCAGCATGACCGAGCCCT...GTTCCCTTCAGAGGAAACAACTGGCCCCTTATTAGACCCACCCCCAGAAGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp TGGAAAGGCCTTTACTTGCTTGGCCAGAAGCTGCTGCTGGATGTGTaGCTGAGCAGCCTGCTGGAGCTTGCTGTACTTCTCCATCTCCTC +
Preference number: 2 (lower is better)
Translates to: WKGLYLLGQKLLLDV*LSSLLELAVLLHLL
Trigger: GAGGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTGCTCAGCAACACATCCAGCAGCAGCTTCTGGCCAAGCAAGTAAAGGCCTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR TCA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAACAGCAAGTGCTCTGGTaGCAACCCACTGGCCAGAGG +
Preference number: 2 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQQQVLW*QPTGQR
Trigger: CCTCTGGCCAGTGGGTTGTCACCAGAGCACTTGCTG...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR TCA 90 bp CCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGACCTTCCCTGTGGCGCTaGGAAGGCAAGACCAGATGG +
Preference number: 2 (lower is better)
Translates to: PRKAKRQPEYGSIYKLMGPSLWR*EGKTRW
Trigger: CCATCTGGTCTTGCCTTCTCAGCGCCACAGGGAAGG...TCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CCA 90 bp AGATGGGGTGAAGTAGTGGGTGAAGGTGAAGTGCAGTGGCAGCTGCTGCAGCAGAGTTCTGATGGCCACTaGAGGGCAGTGCTTTCATCT +
Preference number: 2 (lower is better)
Translates to: RWGEVVGEGEVQWQLLQQSSDGH*RAVLSS
Trigger: AGATGAAAGCACTGCCCTCCAGTGGCCATCAGAACT...CTGCTGCAGCAGCTGCCACTGCACTTCACCTTCACCCACTACTTCACCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCTCCGTTGCCAGCTGTaGGCTGTGGTGCTACGGCTT +
Preference number: 2 (lower is better)
Translates to: LAGINGSTPPREHLWVSSLRCQL*AVVLRL
Trigger: AAGCCGTAGCACCACAGCCCACAGCTGGCAACGGAG...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR TCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCTCAGAAGCCCCCAGCTaGCTGCTGCCCATTAGCTCA +
Preference number: 2 (lower is better)
Translates to: LAGINGSTPPREHLWVSSSEAPS*LLPISS
Trigger: TGAGCTAATGGGCAGCAGTCAGCTGGGGGCTTCTGA...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR TCA 90 bp CAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATCCACTGTGGTTGGTTTaGACATGGGACCACTTCCAG +
Preference number: 2 (lower is better)
Translates to: QGVLVWVLVQNLLGLMTYPLWLV*TWDHFQ
Trigger: CTGGAAGTGGTCCCATGTTCAAACCAACCACAGTGG...ATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTCCAATGTTGCTGTTCTaGGAAGGTGGACCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGPMLLF*EGGPVA
Trigger: AGCAACAGGTCCACCTTCCCAGAACAGCAACATTGG...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR GCA 90 bp CACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGTACCATCAAGATTACTaGTCCCATCAGAGTCTCCTA +
Preference number: 2 (lower is better)
Translates to: HSQGVLVWVLVQNLLGLMYHQDY*SHQSLL
Trigger: TAGGAGACTCTGATGGGAGCAGTAATCTTGATGGTA...CATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR GCA 90 bp CACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGCAGTGCTTTCATCTTTaGTCAAAACTGGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: HSQGVLVWVLVQNLLGLMQCFHL*SKLGRR
Trigger: CCTTCTTCCCAGTTTTGAGCAAAGATGAAAGCACTG...CATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAACCAAGGGAACATTTATaGGTCTCCTCCCCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGEPREHL*VSSPGP
Trigger: AGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGG...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CCA 90 bp CAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATGTCCCTTCCTCCGCATaGTCCTTGAAAACTGATGCT +
Preference number: 2 (lower is better)
Translates to: QGVLVWVLVQNLLGLMTYVPSSA*SLKTDA
Trigger: AGCATCAGTTTTCAAGGACCATGCGGAGGAAGGGAC...ATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp TTCCTTCGGCTGCTCAGAGACTTCACTAACTGTCTTTTCTGCTCCTaGGCTTGCTGCCGCCTTGATGCAGCTTTTAGGCTTGGGAGAACT +
Preference number: 2 (lower is better)
Translates to: FLRLLRDFTNCLFCS*ACCRLDAAFRLGRT
Trigger: AGTTCTCCCAAGCCTAAAAGCTGCATCAAGGCGGCAGCAAGCCAAGGAGCAGAAAAGACAGTTAGTGAAGTCTCTGAGCAGCCGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp CTTGACTGGATCTTCTCCAGTAGCAGTTTGGCAGTGACAGAGTTCTaGTCTTCAGGACTGCAGTCACCTTCTGACCCTCTTCCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: LDWIFSSSSLAVTEF*SSGLQSPSDPLPVP
Trigger: TGGCACAGGAAGAGGGTCAGAAGGTGACTGCAGTCCTGAAGACAAGAACTCTGTCACTGCCAAACTGCTACTGGAGAAGATCCAGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp CTCCAGACTTTGACTCTTCTGGGGGTGGGTCTAATAAGGGGCCAGTaGTTTCCTCTGAAGGGAACTGATGCCCAAATAGGGCATCACTAC +
Preference number: 2 (lower is better)
Translates to: LQTLTLLGVGLIRGQ*FPLKGTDAQIGHHY
Trigger: GTAGTGATGCCCTATTTGGGCATCAGTTCCCTTCAGAGGAAACAACTGGCCCCTTATTAGACCCACCCCCAGAAGAGTCAAAGTCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR TCA 90 bp CACCTTTGGGTCAGTGTGTTAATTAGGGCTGAGAGCCTGGGTGAAAGGCAAGAAGTTTACTGTCTAAACTaGGCTGGGCAGAGGGCATGG +
Preference number: 2 (lower is better)
Translates to: HLWVSVLIRAESLGERQEVYCLN*AGQRAW
Trigger: CCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAAAC...TTCTTGCCTTTCACCCAGGCTCTCAGCCCTAATTAACACACTGACCCAAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR GCA 90 bp TTTACTCTTTTGAGAATTTGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTTGGGCCCACAGCAAGTaGTCTGGTGACAACCCACTG +
Preference number: 2 (lower is better)
Translates to: FTLLRICEGRNRALAQVSWAHSK*SGDNPL
Trigger: CAGTGGGTTGTCACCAGAGCACTTGCTGTGGGCCCA...ACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR GCA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAACCCCCAGCTGACTGCTaGCCATTAGCTCAAAAATCC +
Preference number: 2 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGEPPADC*PLAQKS
Trigger: GGATTTTTGAGCTAATGGGCAGCAGTCAGCTGGGGG...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR GCA 90 bp CACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGCAAGGCTTTGGCAATTaGCTTCTCTTTGTCAACATA +
Preference number: 2 (lower is better)
Translates to: HSQGVLVWVLVQNLLGLMQGFGN*LLFVNI
Trigger: TATGTTGACAAAGAGAAGGCAATTGCCAAAGCCTTG...CATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp ATTCTGCCTCCTGAGGAACGTACTATTTTCTCTCCGCCCACTTCCTaGCTTTTATTTGGCTCACCAGGATCTAGGCCTTGGAGATGGTCC +
Preference number: 2 (lower is better)
Translates to: ILPPEERTIFSPPTS*LLFGSPGSRPWRWS
Trigger: GGACCATCTCCAAGGCCTAGATCCTGGTGAGCCAAATAAAAGCAAGGAAGTGGGCGGAGAGAAAATAGTACGTTCCTCAGGAGGCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp TTCTTTTTCTTTTTGTGCCGGTGGGACTTCCCAGATCGTTCTTTCTaGCTGGGAAGGCTTCTCCCTGTGTCTTCTGTCTCAGACCCATGG +
Preference number: 2 (lower is better)
Translates to: FFFFLCRWDFPDRSF*LGRLLPVSSVSDPW
Trigger: CCATGGGTCTGAGACAGAAGACACAGGGAGAAGCCTTCCCAGCAAGAAAGAACGATCTGGGAAGTCCCACCGGCACAAAAAGAAAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR TCA 90 bp AAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCAATGTGTGGCTCCGTTaGTGTGGGAACTGGATGGAA +
Preference number: 2 (lower is better)
Translates to: KAKRQPEYGSIYKLMGSSNVWLR*CGNWME
Trigger: TTCCATCCAGTTCCCACATCAACGGAGCCACACATT...GCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR TCA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTCTATTGATTCGAGTTTaGCAGGAGCCTTTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGLLIRV*QEPFWQ
Trigger: TTGCCAAAAAGGCTCCTGTCAAACTCGAATCAATAG...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR GCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCTTGTTTTCTTTGCTCTaGCAACTCATGGAGCCGCCG +
Preference number: 2 (lower is better)
Translates to: LAGINGSTPPREHLWVSSLFSLL*QLMEPP
Trigger: CGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAA...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR GCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCATGCTCAAGGTCTGGTaGTATAGGCAGCAAGCTGGA +
Preference number: 2 (lower is better)
Translates to: LAGINGSTPPREHLWVSSMLKVW*YRQQAG
Trigger: TCCAGCTTGCTGCCTATAGCACCAGACCTTGAGCAT...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp ATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACATGGGTCTCCTCCCCTaGCCCTACCTAGGATCCCAT +
Preference number: 2 (lower is better)
Translates to: IIKLHFHATHAHDIILDNMGLLP*PYLGSH
Trigger: ATGGGATCCTAGGTAGGGCCAGGGGAGGAGACCCAT...GTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAAATGGGTCTCCTCCCCTaGCCCTACCTAGGATCCCAT +
Preference number: 2 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKMGLLP*PYLGSH
Trigger: ATGGGATCCTAGGTAGGGCCAGGGGAGGAGACCCAT...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CCA 90 bp CAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATCTCTGGGGCATTCTTTaGGTGTGTAGTATTATCACC +
Preference number: 2 (lower is better)
Translates to: QGVLVWVLVQNLLGLMTYLWGIL*VCSIIT
Trigger: GGTGATAATACTACACACCCAAAGAATGCCCCAGAG...ATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp GGTTTCCTCTCCACTTTCCTTGACTGGATCTTCTCCAGTAGCAGTTaGGCAGTGACAGAGTTCTTGTCTTCAGGACTGCAGTCACCTTCT +
Preference number: 2 (lower is better)
Translates to: GFLSTFLDWIFSSSS*AVTEFLSSGLQSPS
Trigger: AGAAGGTGACTGCAGTCCTGAAGACAAGAACTCTGTCACTGCCAAACTGCTACTGGAGAAGATCCAGTCAAGGAAAGTGGAGAGGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR TCA 90 bp AGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGATCCTTGCGGGATCTTaGAGAGACATTTCGAGCAAA +
Preference number: 2 (lower is better)
Translates to: SLFSLLCQLMEPPKGFFLILAGS*RDISSK
Trigger: TTTGCTCGAAATGTCTCTTCAAGATCCCGCAAGGAT...CAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
3UTR-3UTR GCA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTCGAGCAAACTCTCTCTaGTTCAGATCTTTTAATCTC +
Preference number: 2 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGRANSL*FRSFNL
Trigger: GAGATTAAAAGATCTGAAGCAGAGAGAGTTTGCTCG...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp AACTCAATTCTTTGGCTGTCAGACACTGCCCATCCCAGCTTCTACTaGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGG +
Preference number: 2 (lower is better)
Translates to: NSILWLSDTAHPSFY*LVLMAQHPQGNIYG
Trigger: CCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAGAAGCTGGGATGGGCAGTGTCTGACAGCCAAAGAATTGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
3UTR-3UTR TCA 90 bp CTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGTTATCCTTGCGGGATCTTaGAGAGACATTTCGAGCAAA +
Preference number: 2 (lower is better)
Translates to: LVFFALPTHGAAEGLFPVILAGS*RDISSK
Trigger: TTTGCTCGAAATGTCTCTTCAAGATCCCGCAAGGAT...AACAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
3UTR-3UTR GCA 90 bp CACCTTTGGGTCAGTGTGTTAATTAGGGCTGAGAGCCTGGGTGAAAGGCAAGAAGGAACTGGATGGAATTaGAGCCTGAGTTATATCAGG +
Preference number: 2 (lower is better)
Translates to: HLWVSVLIRAESLGERQEGTGWN*SLSYIR
Trigger: CCTGATATAACTCAGGCTGCAATTCCATCCAGTTCC...TTCTTGCCTTTCACCCAGGCTCTCAGCCCTAATTAACACACTGACCCAAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CCA 90 bp CCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGACTAAACTTGACAGTTTaGAGATGTTGCTGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: PRKAKRQPEYGSIYKLMGLNLTV*RCCCRG
Trigger: CCCTCTGCAGCAACATCTCCAAACTGTCAAGTTTAG...TCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CCA 90 bp TTTACTCTTTTGAGAATTTGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTGCTTTCCACCTCACCTaGGATAACGTAACGTCACCA +
Preference number: 2 (lower is better)
Translates to: FTLLRICEGRNRALAQVSAFHLT*DNVTSP
Trigger: TGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGC...ACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CCA 90 bp TTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCATACTTGACAACGATTaGAATGGGATCTGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: FQVHIQLVFFALPTHGAAILDND*NGICSP
Trigger: GGGAGAACAGATCCCATTCCAATCGTTGTCAAGTAT...GGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
3UTR CAA 90 bp ATCAAGATTACTGCTCCCATCAGAGTCTCCTACCTTCTGCAGTCCTaGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGT +
Preference number: 2 (lower is better)
Translates to: IKITAPIRVSYLLQS*VRTLLIGFCSIFRG
Trigger: ACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTCTGATGGGAGCAGTAATCTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR TCA 90 bp ATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACGGATCTGTTCTCCCCTaGAGAGATTTTCCCAATCCC +
Preference number: 2 (lower is better)
Translates to: IIKLHFHATHAHDIILDNGSVLP*RDFPNP
Trigger: GGGATTGGGAAAATCTCTTCAGGGGAGAACAGATCC...GTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
3UTR CAA 90 bp CCCCAGCTCCTTCTTCTCGTTTCATCCTTTTTAATTTGGATAATGTaGAGGCAAGGGACCCTCCATCCTGAGGGTCTTCATCCTCTTTTT +
Preference number: 2 (lower is better)
Translates to: PQLLLLVSSFLIWIM*RQGTLHPEGLHPLF
Trigger: AAAAAGAGGATGAAGACCCTCAGGATGGAGGGTCCCTTGCCTCAACATTATCCAAATTAAAAAGGATGAAACGAGAAGAAGGAGCTGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR GCA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATAACAGTTTGGAGATGTTaGTGCAGAGGGGTGGGTAGC +
Preference number: 2 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLITVWRC*CRGVGS
Trigger: GCTACCCACCCCTCTGCAGCAACATCTCCAAACTGT...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR GCA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAAATCACCAAATCTCACTaGTTCCAGACAATAAAGCTG +
Preference number: 2 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQITKSH*FQTIKL
Trigger: CAGCTTTATTGTCTGGAAGCAGTGAGATTTGGTGAT...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR GCA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAGGGGGCACTACATACTaGAAATTACTTAACATTTTG +
Preference number: 2 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGEGGTTY*KLLNIL
Trigger: CAAAATGTTAAGTAATTTGCAGTATGTAGTGCCCCC...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CCA 90 bp AGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGTCCCTTCCCAATTTTTGCAATaGGGTCCCCAGATTATTCTT +
Preference number: 2 (lower is better)
Translates to: SPWSELFSSGFVPSSEVPSQFLQ*GPQIIL
Trigger: AAGAATAATCTGGGGACCCCATTGCAAAAATTGGGA...AGGGACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CCA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTATACTTGACAACGATTaGAATGGGATCTGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: LGPRSESAGADDLFFFRFILDND*NGICSP
Trigger: GGGAGAACAGATCCCATTCCAATCGTTGTCAAGTAT...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 90 bp GTTTGCCTGCCACTTTCTTTTCATAAACTTTACTCTTTTGAGAATTaGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTATGGTTTT +
Preference number: 2 (lower is better)
Translates to: VCLPLSFHKLYSFEN*RRQEQSLGPGKYGF
Trigger: AAAACCATACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAAGTTTATGAAAAGAAAGTGGCAGGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CCA 90 bp TATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATACTGTATGTGGCTCCGTTGATGTaGGAACTGGATGGAATTGCA +
Preference number: 2 (lower is better)
Translates to: YGSIYKLMGSSTKMLILYVAPLM*ELDGIA
Trigger: TGCAATTCCATCCAGTTCCCACATCAACGGAGCCAC...ATACAGTATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CCA 90 bp TATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATACTGTATCTGTCTAAACTGAGCTaGGCAGAGGGCATGGAAACT +
Preference number: 2 (lower is better)
Translates to: YGSIYKLMGSSTKMLILYLSKLS*AEGMET
Trigger: AGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAG...ATACAGTATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR CAA 90 bp ATCATAGGAGTTGATATGGTTATCAAATTCCTGATGTTTCTGATATaGCTTATCACACAGTTCACAATAAAAGTTGGCTCTGAGGTCTTC +
Preference number: 2 (lower is better)
Translates to: IIGVDMVIKFLMFLI*LITQFTIKVGSEVF
Trigger: GAAGACCTCAGAGCCAACTTTTATTGTGAACTGTGTGATAAGCAATATCAGAAACATCAGGAATTTGATAACCATATCAACTCCTATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
3UTR GCA 72 bp TCTTCCTGGAGCCTGATCTCTGGGAAGGGCTCCTGGTaGTGCGGCTGCGGTCCCGGCTATAGCTCCGGCTCC +
Preference number: 3 (lower is better)
Translates to: SSWSLISGKGSW*CGCGPGYSSGS
Trigger: GGAGCCGGAGCTATAGCCGGGACCGCAGCCGCAGCACCAGGAGCCCTTCCCAGAGATCAGGCTCCAGGAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp TGCTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTaGTATGACTCCGAGATCGGCTTCGGGACTGGCTGC +
Preference number: 3 (lower is better)
Translates to: CCGCGPGILSAL*YDSEIGFGTGC
Trigger: GCAGCCAGTCCCGAAGCCGATCTCGGAGTCATACCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 72 bp CGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGTATaGCTCCGAGATCGGCTTCGGGACTGGCTGCAACTG +
Preference number: 3 (lower is better)
Translates to: RLRPRDLERSLV*LRDRLRDWLQL
Trigger: CAGTTGCAGCCAGTCCCGAAGCCGATCTCGGAGTCATACCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 72 bp GGCTTCTCCGCTTGCTTCGACTACGACTACAACTGCTaGTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTC +
Preference number: 3 (lower is better)
Translates to: GFSACFDYDYNC*CGCGPGILSAL
Trigger: GAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTAGTCGAAGCAAGCGGAGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 72 bp ACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTTaGGCGCTCTCTGGTATGACTCCGAGATCGGCTTCG +
Preference number: 3 (lower is better)
Translates to: TTTAAAAAAPGS*ALSGMTPRSAS
Trigger: CGAAGCCGATCTCGGAGTCATACCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp GTGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTaGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACT +
Preference number: 3 (lower is better)
Translates to: VVRDCHSQGVLV*VLVQNLLGLMT
Trigger: AGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp CAAGTGGTTGGGGATGGGGGTGAGGGTGAATGCCGATaGCGGCAGCAGCTGCGGCAGCATGATGTTGTAGGA +
Preference number: 3 (lower is better)
Translates to: QVVGDGGEGECR*RQQLRQHDVVG
Trigger: TCCTACAACATCATGCTGCCGCAGCTGCTGCCGCCATCGGCATTCACCCTCACCCCCATCCCCAACCACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTCCCCCAGGCTCCTGCTaGTTCAGGCCGCTACAGGCA +
Preference number: 3 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGPPGSC*FRPLQA
Trigger: TGCCTGTAGCGGCCTGAACAAGCAGGAGCCTGGGGG...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp CGCCGGGAGGAACGATGCGAGGAATGGCGCCGGCCAGACCTTGAGCGGCTGCGGTCTTCTGTGTCAGCCTaGTGTTTACGTTTGTGTTTG +
Preference number: 3 (lower is better)
Translates to: RREERCEEWRRPDLERLRSSVSA*CLRLCL
Trigger: CAAACACAAACGTAAACACAAGGCTGACACAGAAGA...CCGCAGCCGCTCAAGGTCTGGCCGGCGCCATTCCTCGCATCGTTCCTCCCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 72 bp TCTTCAGCTGGGAGGGATCTCCGCTGGGAGTCATCTTaGGCTCTCCGCCTTCTTCTTGGTGGTGCGGGACTG +
Preference number: 3 (lower is better)
Translates to: SSAGRDLRWESS*ALRLLLGGAGL
Trigger: CAGTCCCGCACCACCAAGAAGAAGGCGGAGAGCTCAAGATGACTCCCAGCGGAGATCCCTCCCAGCTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 72 bp GATGCGAGGAATGGCGCCGGCCAGACCTTGAGCGGCTaGGGGAATGCTCACTGCCTGAATCTTCCTCTTCTT +
Preference number: 3 (lower is better)
Translates to: DARNGAGQTLSG*GNAHCLNLPLL
Trigger: AAGAAGAGGAAGATTCAGGCAGTGAGCATTCCCGCAGCCGCTCAAGGTCTGGCCGGCGCCATTCCTCGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp AGGCAGCAAGCTGGACTCCACAGGGCCTGGCTGACTGCTGCTATCCAGGGACTCCCAGATCGTTCTTTCTaGCTGGGAAGGCTTCTCCCT +
Preference number: 3 (lower is better)
Translates to: RQQAGLHRAWLTAAIQGLPDRSF*LGRLLP
Trigger: AGGGAGAAGCCTTCCCAGCAAGAAAGAACGATCTGG...GAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp TGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCCTGTCTTTTCTGCTCCTaGGCTTGCTGCCGCCTTGAT +
Preference number: 3 (lower is better)
Translates to: CVFCLRPMATPRLLLVQACLFCS*ACCRLD
Trigger: ATCAAGGCGGCAGCAAGCCAAGGAGCAGAAAAGACA...GGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp GTGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATTCTCCGCCCACTTCCTaGCTTTTATTTGGCTCACCA +
Preference number: 3 (lower is better)
Translates to: VVRDCHSQGVLVWVLVQNSPPTS*LLFGSP
Trigger: TGGTGAGCCAAATAAAAGCAAGGAAGTGGGCGGAGA...ATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 72 bp GCTGCTCCGTTTGGTGCCTGCTCTTCGCTGGCAGGATaGAGGTGGAAGTTCACCTTTGTGTTTCCTCCCACC +
Preference number: 3 (lower is better)
Translates to: AAPFGACSSLAG*RWKFTFVFPPT
Trigger: GGTGGGAGGAAACACAAAGGTGAACTTCCACCTTCATCCTGCCAGCGAAGAGCAGGCACCAAACGGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp TCACTATCCTCATCTCCACTACTGGGTTGGCTCCGATaGCTAGACCGGCTGCTCCGTTTGGTGCCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: SLSSSPLLGWLR*LDRLLRLVPAL
Trigger: AAGAGCAGGCACCAAACGGAGCAGCCGGTCTAGCCATCGGAGCCAACCCAGTAGTGGAGATGAGGATAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp CCCTATCAGTGGAAGGACAGGCTTATTGCCAAGAGATaGGGGGAGCTTGGGCCCAAAGTAACCTTGTGGGGG +
Preference number: 3 (lower is better)
Translates to: PYQWKDRLIAKR*GELGPKVTLWG
Trigger: CCCCCACAAGGTTACTTTGGGCCCAAGCTCCCCCCATCTCTTGGCAATAAGCCTGTCCTTCCACTGATAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp GTGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCCAAAACTCAATTCTTaGGCTGTCAGACACTGCCCA +
Preference number: 3 (lower is better)
Translates to: VVRDCHSQGVLVWVLVQNPKLNS*AVRHCP
Trigger: TGGGCAGTGTCTGACAGCCAAAGAATTGAGTTTTGG...ATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp TACGACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGGTTTCTTTAGAAGAGTaGGACTCACACATTTGGGTC +
Preference number: 3 (lower is better)
Translates to: YDYNCCCGCGPGILSALWVSLEE*DSHIWV
Trigger: GACCCAAATGTGTGAGTCCAACTCTTCTAAAGAAAC...CCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp TGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCCGGACCAGTAGGATGTTaGGGTCCTTCTTGGCTTTCT +
Preference number: 3 (lower is better)
Translates to: CVFCLRPMATPRLLLVQAGPVGC*GPSWLS
Trigger: AGAAAGCCAAGAAGGACCCAAACATCCTACTGGTCC...GGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTAGGCATCTGAGCTACTaGAGTAAGAACGCCGGGAGG +
Preference number: 3 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGRHLSY*SKNAGR
Trigger: CCTCCCGGCGTTCTTACTCAAGTAGCTCAGATGCCT...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 72 bp ACTTGCTTGGCCAGAAGCTGCTGCTGGATGTGTTGCTaGGCAGCCTGCTGGAGCTTGCTGTACTTCTCCATC +
Preference number: 3 (lower is better)
Translates to: TCLARSCCWMCC*AACWSLLYFSI
Trigger: GATGGAGAAGTACAGCAAGCTCCAGCAGGCTGCTCAGCAACACATCCAGCAGCAGCTTCTGGCCAAGCAAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 72 bp TCCTTGAGCTTGGGCCCAGCTTTATTAGGGGTGGCCTaGACCTCCTCACTCACACTAGGTTTCCTCTCCACT +
Preference number: 3 (lower is better)
Translates to: SLSLGPALLGVA*TSSLTLGFLST
Trigger: AGTGGAGAGGAAACCTAGTGTGAGTGAGGAGGTGCAGGCCACCCCTAATAAAGCTGGGCCCAAGCTCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp ACCTTCATCCTTTTTGCCACTGCTCCCCTCTTCAGCTaGGAGGGATCTCCGCTGGGAGTCATCTTGAGCTCT +
Preference number: 3 (lower is better)
Translates to: TFILFATAPLFS*EGSPLGVILSS
Trigger: AGAGCTCAAGATGACTCCCAGCGGAGATCCCTCCCAGCTGAAGAGGGGAGCAGTGGCAAAAAGGATGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp GAAGCATCATCACTATCCTCATCTCCACTACTGGGTTaGCTCCGATGGCTAGACCGGCTGCTCCGTTTGGTG +
Preference number: 3 (lower is better)
Translates to: EASSLSSSPLLG*LRWLDRLLRLV
Trigger: CACCAAACGGAGCAGCCGGTCTAGCCATCGGAGCCAACCCAGTAGTGGAGATGAGGATAGTGATGATGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp TACGACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGATAATCCTTGTACTTTaGTCTCAGCTCTTCTGTGTC +
Preference number: 3 (lower is better)
Translates to: YDYNCCCGCGPGILSALWIILVL*SQLFCV
Trigger: GACACAGAAGAGCTGAGACAAAAGTACAAGGATTAT...CCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp CACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGTACCTTCTGCAGTCCTaGGTCAGAACTCTTCTCATC +
Preference number: 3 (lower is better)
Translates to: HSQGVLVWVLVQNLLGLMYLLQS*VRTLLI
Trigger: GATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTA...CATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp CACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGTGCTTCTTTTTCTTTTaGTGCCGGTGGGACTTCCCA +
Preference number: 3 (lower is better)
Translates to: HSQGVLVWVLVQNLLGLMCFFFF*CRWDFP
Trigger: TGGGAAGTCCCACCGGCACAAAAAGAAAAAGAAGCA...CATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp CCAAAGCTGATGCCTTGGGAGGCTAACCCAGGAGCCTaGGCCAGTCCAGTGGTATTAGTGATTTGTACTGCA +
Preference number: 3 (lower is better)
Translates to: PKLMPWEANPGA*ASPVVLVICTA
Trigger: TGCAGTACAAATCACTAATACCACTGGACTGGCCCAGGCTCCTGGGTTAGCCTCCCAAGGCATCAGCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp TGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCCCCCATGACATCATACTaGACAACGATTGGAATGGGA +
Preference number: 3 (lower is better)
Translates to: CVFCLRPMATPRLLLVQAPMTSY*TTIGMG
Trigger: TCCCATTCCAATCGTTGTCAAGTATGATGTCATGGG...GGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 72 bp TCTAATAAGGGGCCAGTTGTTTCCTCTGAAGGGAACTaGTGCCCAAATAGGGCATCACTACTCCCTGGGGGC +
Preference number: 3 (lower is better)
Translates to: SNKGPVVSSEGN*CPNRASLLPGG
Trigger: GCCCCCAGGGAGTAGTGATGCCCTATTTGGGCATCAGTTCCCTTCAGAGGAAACAACTGGCCCCTTATTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCGCCACTGTGGTTGGTTaGAACATGGGACCACTTCCA +
Preference number: 3 (lower is better)
Translates to: LAGINGSTPPREHLWVSSATVVG*NMGPLP
Trigger: TGGAAGTGGTCCCATGTTCAAACCAACCACAGTGGC...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR TCA 72 bp ACTGTACTGGGATGGAGACTTCTGGTGCAGCCGGTGTaGGGAAGCATCATCACTATCCTCATCTCCACTACT +
Preference number: 3 (lower is better)
Translates to: TVLGWRLLVQPV*GSIITILISTT
Trigger: AGTAGTGGAGATGAGGATAGTGATGATGCTTCCTCACACCGGCTGCACCAGAAGTCTCCATCCCAGTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 72 bp ATGTGTGGCTCCGTTGATGTGGGAACTGGATGGAATTaGAGCCTGAGTTATATCAGGTTCCAGGTGAGACGC +
Preference number: 3 (lower is better)
Translates to: MCGSVDVGTGWN*SLSYIRFQVRR
Trigger: GCGTCTCACCTGGAACCTGATATAACTCAGGCTGCAATTCCATCCAGTTCCCACATCAACGGAGCCACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR GCA 72 bp TTAAAGATGAGCATCCCTCAGAAGCCCCCAGCTGACTaGTGCCCATTAGCTCAAAAATCCCAATACTGGGGG +
Preference number: 3 (lower is better)
Translates to: LKMSIPQKPPAD*CPLAQKSQYWG
Trigger: CCCCCAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGGGGGCTTCTGAGGGATGCTCATCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR GCA 72 bp ACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTaGCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTG +
Preference number: 3 (lower is better)
Translates to: TSRCTFSLFSLL*QLMEPPKGFFL
Trigger: CAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
3UTR GCA 72 bp CTTCGGCTGCTCAGAGACTTCACTAACTGTCTTTTCTaGTCCTTGGCTTGCTGCCGCCTTGATGCAGCTTTT +
Preference number: 3 (lower is better)
Translates to: LRLLRDFTNCLF*SLACCRLDAAF
Trigger: AAAAGCTGCATCAAGGCGGCAGCAAGCCAAGGAGCAGAAAAGACAGTTAGTGAAGTCTCTGAGCAGCCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 72 bp TCTTCTTCCTCACTGTACTGGGATGGAGACTTCTGGTaGAGCCGGTGTGAGGAAGCATCATCACTATCCTCA +
Preference number: 3 (lower is better)
Translates to: SSSSLYWDGDFW*SRCEEASSLSS
Trigger: TGAGGATAGTGATGATGCTTCCTCACACCGGCTGCACCAGAAGTCTCCATCCCAGTACAGTGAGGAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 72 bp TGCAGTCACCTTCTGACCCTCTTCCTGTGCCAATGTTaGTGTTCTGGGAAGGTGGACCTGTTGCTTTACTGT +
Preference number: 3 (lower is better)
Translates to: CSHLLTLFLCQC*CSGKVDLLLYC
Trigger: ACAGTAAAGCAACAGGTCCACCTTCCCAGAACAGCAACATTGGCACAGGAAGAGGGTCAGAAGGTGACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp TGGCATAGTCTGAGTCATCTGAGTCATGGGAGCGCTTaGAGTGCCTTCGTGATCTGTCACTGTAGTCACTGT +
Preference number: 3 (lower is better)
Translates to: WHSLSHLSHGSA*SAFVICHCSHC
Trigger: ACAGTGACTACAGTGACAGATCACGAAGGCACTCCAAGCGCTCCCATGACTCAGATGACTCAGACTATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAATGTGTGGCTCCGTaGATGTGGGAACTGGATGGA +
Preference number: 3 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGEKCVAP*MWELDG
Trigger: TCCATCCAGTTCCCACATCAACGGAGCCACACATTT...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CAA 90 bp GACTCTTCTGGGGGTGGGTCTAATAAGGGGCCAGTTGTTTCCTCTGAAGGGAACCCAAGGCTTTGGCAATaGCCTTCTCTTTGTCAACAT +
Preference number: 3 (lower is better)
Translates to: DSSGGGSNKGPVVSSEGNPRLWQ*PSLCQH
Trigger: ATGTTGACAAAGAGAAGGCAATTGCCAAAGCCTTGG...GTTCCCTTCAGAGGAAACAACTGGCCCCTTATTAGACCCACCCCCAGAAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp GACTCTTCTGGGGGTGGGTCTAATAAGGGGCCAGTTGTTTCCTCTGAAGGGAACAATATTTGTGCCGTTTaGATCGGTGTTTGGAGCTGG +
Preference number: 3 (lower is better)
Translates to: DSSGGGSNKGPVVSSEGNNICAV*IGVWSW
Trigger: CCAGCTCCAAACACCGATCAAAACGGCACAAATATT...GTTCCCTTCAGAGGAAACAACTGGCCCCTTATTAGACCCACCCCCAGAAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 72 bp AGAGACTTCACTAACTGTCTTTTCTGCTCCTTGGCTTaGTGCCGCCTTGATGCAGCTTTTAGGCTTGGGAGA +
Preference number: 3 (lower is better)
Translates to: RDFTNCLFCSLA*CRLDAAFRLGR
Trigger: TCTCCCAAGCCTAAAAGCTGCATCAAGGCGGCAGCAAGCCAAGGAGCAGAAAAGACAGTTAGTGAAGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp TGCCAAATGTGTGGCTCCGTTGATGTGGGAACTGGATaGAATTGCAGCCTGAGTTATATCAGGTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: CQMCGSVDVGTG*NCSLSYIRFQV
Trigger: CACCTGGAACCTGATATAACTCAGGCTGCAATTCCATCCAGTTCCCACATCAACGGAGCCACACATTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR CCA 72 bp CTGCTCCCATCAGAGTCTCCTACCTTCTGCAGTCCTTaGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCT +
Preference number: 3 (lower is better)
Translates to: LLPSESPTFCSP*SELFSSGFVPS
Trigger: AGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTCTGATGGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCAAAACTCAATTCTTaGGCTGTCAGACACTGCCCA +
Preference number: 3 (lower is better)
Translates to: LAGINGSTPPREHLWVSSPKLNS*AVRHCP
Trigger: TGGGCAGTGTCTGACAGCCAAAGAATTGAGTTTTGG...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
3UTR-3UTR CAA 90 bp AAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCCAGACAATAAAGCTGTaGAATCCCCTCCTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: KAKRQPEYGSIYKLMGSSQTIKL*NPLLLL
Trigger: GAGGAGAAGGAGGGGATTCAACAGCTTTATTGTCTG...GCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR TCA 72 bp ACTGTTAAAGATGAGCATCCCTCAGAAGCCCCCAGCTaGCTGCTGCCCATTAGCTCAAAAATCCCAATACTG +
Preference number: 3 (lower is better)
Translates to: TVKDEHPSEAPS*LLPISSKIPIL
Trigger: CAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGGGGGCTTCTGAGGGATGCTCATCTTTAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR GCA 72 bp GGGGATTATCTAAACTTGACAGTTTGGAGATGTTGCTaGAGAGGGGTGGGTAGCACTTACTGGTGTTCCCTA +
Preference number: 3 (lower is better)
Translates to: GDYLNLTVWRCC*RGVGSTYWCSL
Trigger: TAGGGAACACCAGTAAGTGCTACCCACCCCTCTGCAGCAACATCTCCAAACTGTCAAGTTTAGATAATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR GCA 72 bp AGCCTGGGCCAGTCCAGTGGTATTAGTGATTTGTACTaGAGTGAAAGGGCCTCCTTTATCTGTGGAGAATTC +
Preference number: 3 (lower is better)
Translates to: SLGQSSGISDLY*SERASFICGEF
Trigger: GAATTCTCCACAGATAAAGGAGGCCCTTTCACTGCAGTACAAATCACTAATACCACTGGACTGGCCCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 72 bp TGTCACTGTAGTCACTGTAGCTGTCATCAGAGTAACTaGGCTGTCTACTATAGCAGCTCTGGTCTGAAGAGG +
Preference number: 3 (lower is better)
Translates to: CHCSHCSCHQSN*AVYYSSSGLKR
Trigger: CCTCTTCAGACCAGAGCTGCTATAGTAGACAGCGCAGTTACTCTGATGACAGCTACAGTGACTACAGTGACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp GCGACCCATGCCCATGACATCATACTTGACAACGATTaGAATGGGATCTGTTCTCCCCTGAAGAGATTTTCC +
Preference number: 3 (lower is better)
Translates to: ATHAHDIILDND*NGICSPLKRFS
Trigger: GGAAAATCTCTTCAGGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
3UTR CCA 72 bp AGACTCTTCACACTTCTTATTGGGCTTTCGGGTAGCTaGGAGCTTCCCTATCAGTGGAAGGACAGGCTTATT +
Preference number: 3 (lower is better)
Translates to: RLFTLLIGLSGS*ELPYQWKDRLI
Trigger: AATAAGCCTGTCCTTCCACTGATAGGGAAGCTCCCAGCTACCCGAAAGCCCAATAAGAAGTGTGAAGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp GCGACCCATGCCCATGACATCATACTTGACAACGATTaGAATGGGATCTGTTCTCCCACTGCTAAGATTACC +
Preference number: 3 (lower is better)
Translates to: ATHAHDIILDND*NGICSPTAKIT
Trigger: GGTAATCTTAGCAGTGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592746.5
3UTR-3UTR CAA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCATCCCAGCTTCTACTaGCTGGTATTAATGGCTCAA +
Preference number: 3 (lower is better)
Translates to: LAGINGSTPPREHLWVSSHPSFY*LVLMAQ
Trigger: TTGAGCCATTAATACCAGCAAGTAGAAGCTGGGATG...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
3UTR-3UTR CAA 90 bp CCAGCTGACTGCTGCCCATTAGCTCAAAAATCCCAATACTGGGGGCACTACATATCTAAACTTGACAGTTaGGAGATGTTGCTGCAGAGG +
Preference number: 3 (lower is better)
Translates to: PADCCPLAQKSQYWGHYISKLDS*EMLLQR
Trigger: CCTCTGCAGCAACATCTCCAAACTGTCAAGTTTAGA...TATGTAGTGCCCCCAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CAA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCAGGTGCACATTCAGCTaGTTTTCTTTGCTCTGCCAA +
Preference number: 3 (lower is better)
Translates to: LAGINGSTPPREHLWVSSRCTFS*FSLLCQ
Trigger: TTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCT...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCTCCTCCGCATGGTCCTaGAAAACTGATGCTATTGAT +
Preference number: 3 (lower is better)
Translates to: LAGINGSTPPREHLWVSSSSAWS*KTDAID
Trigger: ATCAATAGCATCAGTTTTCAAGGACCATGCGGAGGA...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp CAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATATGGAGGGTTCTGCCTaGGTGAAAATTAATAGTTCT +
Preference number: 3 (lower is better)
Translates to: QGVLVWVLVQNLLGLMTYMEGSA*VKINSS
Trigger: AGAACTATTAATTTTCACCAAGGCAGAACCCTCCAT...ATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp AGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGTCCCTCATCCCAGCTTCTACTaGCTGGTATTAATGGCTCAA +
Preference number: 3 (lower is better)
Translates to: SPWSELFSSGFVPSSEVPHPSFY*LVLMAQ
Trigger: TTGAGCCATTAATACCAGCAAGTAGAAGCTGGGATG...AGGGACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCGGGGATTATCTAAACTaGACAGTTTGGAGATGTTGC +
Preference number: 3 (lower is better)
Translates to: LAGINGSTPPREHLWVSSGDYLN*TVWRCC
Trigger: GCAACATCTCCAAACTGTCAAGTTTAGATAATCCCC...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR-3UTR CAA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCAGTCAAGAGTTGTGTTaGCCTGCCACTTTCTTTTCA +
Preference number: 3 (lower is better)
Translates to: LAGINGSTPPREHLWVSSSQELC*PATFFS
Trigger: TGAAAAGAAAGTGGCAGGCAAACACAACTCTTGACT...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR TCA 72 bp GATACCAAGATAACAGTGCCAAATGTGTGGCTCCGTTaGTGTGGGAACTGGATGGAATTGCAGCCTGAGTTA +
Preference number: 3 (lower is better)
Translates to: DTKITVPNVWLR*CGNWMELQPEL
Trigger: TAACTCAGGCTGCAATTCCATCCAGTTCCCACATCAACGGAGCCACACATTTGGCACTGTTATCTTGGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR GCA 72 bp TCAAGATTACTGCTCCCATCAGAGTCTCCTACCTTCTaGAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTT +
Preference number: 3 (lower is better)
Translates to: SRLLLPSESPTF*SPWSELFSSGF
Trigger: AAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTCTGATGGGAGCAGTAATCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp ATGAATATTTGTGCCGTTTTGATCGGTGTTTGGAGCTaGCATAGTCTGAGTCATCTGAGTCATGGGAGCGCT +
Preference number: 3 (lower is better)
Translates to: MNICAVLIGVWS*HSLSHLSHGSA
Trigger: AGCGCTCCCATGACTCAGATGACTCAGACTATGCCAGCTCCAAACACCGATCAAAACGGCACAAATATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR-3UTR CAA 90 bp CTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGTTATAATCCTTGTACTTTaGTCTCAGCTCTTCTGTGTC +
Preference number: 3 (lower is better)
Translates to: LVFFALPTHGAAEGLFPVIILVL*SQLFCV
Trigger: GACACAGAAGAGCTGAGACAAAAGTACAAGGATTAT...AACAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
3UTR-3UTR CAA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCTCAGAAGATGAATATTaGTGCCGTTTTGATCGGTGT +
Preference number: 3 (lower is better)
Translates to: LAGINGSTPPREHLWVSSSEDEY*CRFDRC
Trigger: ACACCGATCAAAACGGCACAAATATTCATCTTCTGA...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CCA 72 bp TCTGCCTTGGTGAAAATTAATAGTTCTGATGGCCACTaGAGGGCAGTGCTTTCATCTTTGCTCAAAACTGGG +
Preference number: 3 (lower is better)
Translates to: SALVKINSSDGH*RAVLSSLLKTG
Trigger: CCCAGTTTTGAGCAAAGATGAAAGCACTGCCCTCCAGTGGCCATCAGAACTATTAATTTTCACCAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR GCA 72 bp AGGAGGGTGGGAGGGCAGTCAAGAGTTGTGTTTGCCTaGCACTTTCTTTTCATAAACTTTACTCTTTTGAGA +
Preference number: 3 (lower is better)
Translates to: RRVGGQSRVVFA*HFLFINFTLLR
Trigger: TCTCAAAAGAGTAAAGTTTATGAAAAGAAAGTGGCAGGCAAACACAACTCTTGACTGCCCTCCCACCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR TCA 72 bp GAGGAGGACAGGAAAAAGAAATCCCTGATAGTAAACTaGAAGCAAACTTCAAATCTAAACCCACCCCTGCAA +
Preference number: 3 (lower is better)
Translates to: EEDRKKKSLIVN*KQTSNLNPPLQ
Trigger: TTGCAGGGGTGGGTTTAGATTTGAAGTTTGCTTTCAGTTTACTATCAGGGATTTCTTTTTCCTGTCCTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR GCA 72 bp ATTCATGATAGGATCTTCTTTTCTGGGATATGGAGATaGCTCTTCTGGGATGAGGGATACCAAGATAACAGT +
Preference number: 3 (lower is better)
Translates to: IHDRIFFSGIWR*LFWDEGYQDNS
Trigger: ACTGTTATCTTGGTATCCCTCATCCCAGAAGAGGCATCTCCATATCCCAGAAAAGAAGATCCTATCATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR CCA 72 bp GCTTTTATTCATGATAGGATCTTCTTTTCTGGGATATaGAGATGCCTCTTCTGGGATGAGGGATACCAAGAT +
Preference number: 3 (lower is better)
Translates to: AFIHDRIFFSGI*RCLFWDEGYQD
Trigger: ATCTTGGTATCCCTCATCCCAGAAGAGGCATCTCCATATCCCAGAAAAGAAGATCCTATCATGAATAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR CCA 72 bp ATTCTAGCCACACGAATAGTTAGGAAAATGCCAAAGTaGGAATTGTTAACCTCATCAAAGGAGATGGGACCT +
Preference number: 3 (lower is better)
Translates to: ILATRIVRKMPK*ELLTSSKEMGP
Trigger: AGGTCCCATCTCCTTTGATGAGGTTAACAATTCCCACTTTGGCATTTTCCTAACTATTCGTGTGGCTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR CAA 72 bp GCTGCGGCTGCGGTCCCGGCTATAGCTCCGGCTCCGTaGCCAGCTGTGGGCTGTGGTGCTACGGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: AAAAVPAIAPAP*PAVGCGATASP
Trigger: CGGAGAAGCCGTAGCACCACAGCCCACAGCTGGCAACGGAGCCGGAGCTATAGCCGGGACCGCAGCCGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CGCCGGGAGGAACGATGCGAGGAATGGCGCCGGCCAGACCTTGAGCGGCTGCGGCAGGGCCTGGCTGACTaGTGCTATCCAGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: RREERCEEWRRPDLERLRQGLAD*CYPGTP
Trigger: TGGAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTG...CCGCAGCCGCTCAAGGTCTGGCCGGCGCCATTCCTCGCATCGTTCCTCCCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp CGCCGGGAGGAACGATGCGAGGAATGGCGCCGGCCAGACCTTGAGCGGCTGCGGCCCAGGATGGATGGCTaGGGCGGGAATGATGTGGAT +
Preference number: 4 (lower is better)
Translates to: RREERCEEWRRPDLERLRPRMDG*GGNDVD
Trigger: ATCCACATCATTCCCGCCTCAGCCATCCATCCTGGG...CCGCAGCCGCTCAAGGTCTGGCCGGCGCCATTCCTCGCATCGTTCCTCCCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CGCCGGGAGGAACGATGCGAGGAATGGCGCCGGCCAGACCTTGAGCGGCTGCGGGGCCACAAGAAGCAGTaGCACCTGTGCCACTATTTG +
Preference number: 4 (lower is better)
Translates to: RREERCEEWRRPDLERLRGHKKQ*HLCHYL
Trigger: CAAATAGTGGCACAGGTGCCACTGCTTCTTGTGGCC...CCGCAGCCGCTCAAGGTCTGGCCGGCGCCATTCCTCGCATCGTTCCTCCCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TACGACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGACCGGCTGCTCCGTTTaGTGCCTGCTCTTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: YDYNCCCGCGPGILSALWTGCSV*CLLFAG
Trigger: GCCAGCGAAGAGCAGGCACCAAACGGAGCAGCCGGT...CCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTGGGAAGGGCTCCTGGTaGTGCGGCTGCGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGGKGSW*CGCGPG
Trigger: GCCGGGACCGCAGCCGCAGCACCAGGAGCCCTTCCC...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CGCCGGGAGGAACGATGCGAGGAATGGCGCCGGCCAGACCTTGAGCGGCTGCGGCCAATGTTGCTGTTCTaGGAAGGTGGACCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: RREERCEEWRRPDLERLRPMLLF*EGGPVA
Trigger: AGCAACAGGTCCACCTTCCCAGAACAGCAACATTGG...CCGCAGCCGCTCAAGGTCTGGCCGGCGCCATTCCTCGCATCGTTCCTCCCGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 72 bp GGTGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTaGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: GGAGLPLPGGSG*GPRSESAGADD
Trigger: GTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 72 bp GGGAGGAACGATGCGAGGAATGGCGCCGGCCAGACCTaGAGCGGCTGCGGGAATGCTCACTGCCTGAATCTT +
Preference number: 4 (lower is better)
Translates to: GRNDARNGAGQT*SGCGNAHCLNL
Trigger: AAGATTCAGGCAGTGAGCATTCCCGCAGCCGCTCAAGGTCTGGCCGGCGCCATTCCTCGCATCGTTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 72 bp GACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTaGAGCGCTCTCTGGTATGACTCCGAGATCGGCTTC +
Preference number: 4 (lower is better)
Translates to: DYNCCCGCGPGI*SALWYDSEIGF
Trigger: GAAGCCGATCTCGGAGTCATACCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp ATCTGTGGAGAATTCAGATCCCAGGCCACAAGAAGCAGTGGCACCTGTGCCACTGCGCCGGCCAGACCTTaGGCGGCTGCGGGAATGCTC +
Preference number: 4 (lower is better)
Translates to: ICGEFRSQATRSSGTCATAPARP*AAAGML
Trigger: GAGCATTCCCGCAGCCGCTCAAGGTCTGGCCGGCGC...AGTGGCACAGGTGCCACTGCTTCTTGTGGCCTGGGATCTGAATTCTCCACAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp AGGCAGCAAGCTGGACTCCACAGGGCCTGGCTGACTGCTGCTATCCAGGGACTCTCCTCAGGGCTCTCGTaGCCCCATGATCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RQQAGLHRAWLTAAIQGLSSGLS*PHDLFL
Trigger: CAGGAAGAGATCATGGGGTCACGAGAGCCCTGAGGA...GAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCAGTCTCGGTCTTCGTTaGAGCGGGAGAAGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: WCGTATPRGFWFGSSFRISLGLR*SGRSGP
Trigger: CGGACCGCTTCTCCCGCTTCAACGAAGACCGAGACT...GATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCCAAGTGCAGTGGCAGCTaGTGCAGCAGGCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: CVFCLRPMATPRLLLVQAKCSGS*CSRPWS
Trigger: GCTCCACGGCCTGCTGCAGCAGCTGCCACTGCACTT...GGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGCCGCCTTCTTCTTGGTaGTGCGGGACTGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: HSQGVLVWVLVQNLLGLMPPSSW*CGTATP
Trigger: GGGAGTGGCAGTCCCGCACCACCAAGAAGAAGGCGG...CATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp GTGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATGAAGGTGAAGTGCAGTaGCAGCTGCTGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: VVRDCHSQGVLVWVLVQNEGEVQ*QLLQQA
Trigger: GGCCTGCTGCAGCAGCTGCCACTGCACTTCACCTTC...ATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TGCCTCTTCTGGGATGAGGGATACCAAGATAACAGTGCCAAATGTGTGGCTCCGGCGCCGGCCAGACCTTaGGCGGCTGCGGGAATGCTC +
Preference number: 4 (lower is better)
Translates to: CLFWDEGYQDNSAKCVAPAPARP*AAAGML
Trigger: GAGCATTCCCGCAGCCGCTCAAGGTCTGGCCGGCGC...CGGAGCCACACATTTGGCACTGTTATCTTGGTATCCCTCATCCCAGAAGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp AGGCAGCAAGCTGGACTCCACAGGGCCTGGCTGACTGCTGCTATCCAGGGACTCAGCTTCTCCAGACTTTaGCTCTTCTGGGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: RQQAGLHRAWLTAAIQGLSFSRL*LFWGWV
Trigger: GACCCACCCCCAGAAGAGTCAAAGTCTGGAGAAGCT...GAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TACGACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGCAGCCTGCTGGAGCTTaGTGTACTTCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: YDYNCCCGCGPGILSALWQPAGA*CTSPSP
Trigger: AGGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTG...CCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCAGCGGTCCGCCATTTTaGCGCCTTCACTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: WCGTATPRGFWFGSSFRISGPPF*RLHSSQ
Trigger: CTGAGAGGAGTGAAGGCGGCAAAATGGCGGACCGCT...GATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp AGATGGGGTGAAGTAGTGGGTGAAGGTGAAGTGCAGTGGCAGCTGCTGCAGCAGGCTCCCCTCTTCAGCTaGGAGGGATCTCCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RWGEVVGEGEVQWQLLQQAPLFS*EGSPLG
Trigger: TCCCAGCGGAGATCCCTCCCAGCTGAAGAGGGGAGC...CTGCTGCAGCAGCTGCCACTGCACTTCACCTTCACCCACTACTTCACCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp AGGCAGCAAGCTGGACTCCACAGGGCCTGGCTGACTGCTGCTATCCAGGGACTCCTCACTGTACTGGGATaGAGACTTCTGGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RQQAGLHRAWLTAAIQGLLTVLG*RLLVQP
Trigger: CGGCTGCACCAGAAGTCTCCATCCCAGTACAGTGAG...GAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCCCTCCGTTGCCAGCTGTaGGCTGTGGTGCTACGGCTT +
Preference number: 4 (lower is better)
Translates to: CVFCLRPMATPRLLLVQALRCQL*AVVLRL
Trigger: AAGCCGTAGCACCACAGCCCACAGCTGGCAACGGAG...GGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 72 bp CTCTTCAGCTGGGAGGGATCTCCGCTGGGAGTCATCTaGAGCTCTCCGCCTTCTTCTTGGTGGTGCGGGACT +
Preference number: 4 (lower is better)
Translates to: LFSWEGSPLGVI*SSPPSSWWCGT
Trigger: AGTCCCGCACCACCAAGAAGAAGGCGGAGAGCTCAAGATGACTCCCAGCGGAGATCCCTCCCAGCTGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp AGGCAGCAAGCTGGACTCCACAGGGCCTGGCTGACTGCTGCTATCCAGGGACTCAGGGACCCTCCATCCTaGGGGTCTTCATCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RQQAGLHRAWLTAAIQGLRDPPS*GSSSSF
Trigger: AAAAGAGGATGAAGACCCTCAGGATGGAGGGTCCCT...GAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TACGACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGGGATCTGTTCTCCCCTaGAGAGATTTTCCCAATCCC +
Preference number: 4 (lower is better)
Translates to: YDYNCCCGCGPGILSALWGSVLP*RDFPNP
Trigger: GGGATTGGGAAAATCTCTTCAGGGGAGAACAGATCC...CCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CGCCGGGAGGAACGATGCGAGGAATGGCGCCGGCCAGACCTTGAGCGGCTGCGGTCCCAATTTTTGCAATaGGGTCCCCAGATTATTCTT +
Preference number: 4 (lower is better)
Translates to: RREERCEEWRRPDLERLRSQFLQ*GPQIIL
Trigger: AAGAATAATCTGGGGACCCCATTGCAAAAATTGGGA...CCGCAGCCGCTCAAGGTCTGGCCGGCGCCATTCCTCGCATCGTTCCTCCCGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCGCTTTCTTTCCCTGCTaGGGTGGCCAGAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: WCGTATPRGFWFGSSFRIAFFPC*GGQRGF
Trigger: GAAACCTCTCTGGCCACCCCAGCAGGGAAAGAAAGC...GATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CTTCCACCACTAGAACAGCTTGGCCTTCCCTGTGGCGCTGAGAAGGCAAGACCACTGGAGCCTGATCTCTaGGAAGGGCTCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPPLEQLGLPCGAEKARPLEPDL*EGLLVL
Trigger: CAGCACCAGGAGCCCTTCCCAGAGATCAGGCTCCAG...TGGTCTTGCCTTCTCAGCGCCACAGGGAAGGCCAAGCTGTTCTAGTGGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CTTCCACCACTAGAACAGCTTGGCCTTCCCTGTGGCGCTGAGAAGGCAAGACCACTCACGTGCCATGGCTaGGGGGATGTTGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LPPLEQLGLPCGAEKARPLTCHG*GDVAGP
Trigger: AGGACCTGCAACATCCCCCCAGCCATGGCACGTGAG...TGGTCTTGCCTTCTCAGCGCCACAGGGAAGGCCAAGCTGTTCTAGTGGTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp AGGCAGCAAGCTGGACTCCACAGGGCCTGGCTGACTGCTGCTATCCAGGGACTCGAGTCTCCTACCTTCTaGAGTCCTTGGTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: RQQAGLHRAWLTAAIQGLESPTF*SPWSEL
Trigger: GAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC...GAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCCTTCTGCTCCTTGGCTTaGTGCCGCCTTGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: CVFCLRPMATPRLLLVQAFCSLA*CRLDAA
Trigger: AGCTGCATCAAGGCGGCAGCAAGCCAAGGAGCAGAA...GGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CTTCCACCACTAGAACAGCTTGGCCTTCCCTGTGGCGCTGAGAAGGCAAGACCAAGCGGTCCGCCATTTTaGCGCCTTCACTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LPPLEQLGLPCGAEKARPSGPPF*RLHSSQ
Trigger: CTGAGAGGAGTGAAGGCGGCAAAATGGCGGACCGCT...TGGTCTTGCCTTCTCAGCGCCACAGGGAAGGCCAAGCTGTTCTAGTGGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp AGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGGAGGGTGAATGCCGATaGCGGCAGCAGCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SLFSLLCQLMEPPKGFFLEGECR*RQQLRQ
Trigger: CTGCCGCAGCTGCTGCCGCCATCGGCATTCACCCTC...CAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp ATCTGTGGAGAATTCAGATCCCAGGCCACAAGAAGCAGTGGCACCTGTGCCACTGGACAGGGTGAAAGGTaGAGGGCCCAGGATGGATGG +
Preference number: 4 (lower is better)
Translates to: ICGEFRSQATRSSGTCATGQGER*RAQDGW
Trigger: CCATCCATCCTGGGCCCTTCACCTTTCACCCTGTCC...AGTGGCACAGGTGCCACTGCTTCTTGTGGCCTGGGATCTGAATTCTCCACAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp AGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGTTGGTGGTGCGGGACTaGCACTCCCAGGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SLFSLLCQLMEPPKGFFLLVVRD*HSQGVL
Trigger: CAGAACCCCCTGGGAGTGGCAGTCCCGCACCACCAA...CAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp AGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGTCCCTCGCCGGGAGGAACGATaGGAGGAATGGCGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: SPWSELFSSGFVPSSEVPRREER*EEWRRP
Trigger: TGGCCGGCGCCATTCCTCGCATCGTTCCTCCCGGCG...AGGGACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACAGGGAAGGGCTCCTGGTaGTGCGGCTGCGGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTGKGSW*CGCGPG
Trigger: GCCGGGACCGCAGCCGCAGCACCAGGAGCCCTTCCC...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp GTGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATATGCTCAAGGTCTGGTaGTATAGGCAGCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VVRDCHSQGVLVWVLVQNMLKVW*YRQQAG
Trigger: TCCAGCTTGCTGCCTATAGCACCAGACCTTGAGCAT...ATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TGCCTCTTCTGGGATGAGGGATACCAAGATAACAGTGCCAAATGTGTGGCTCCGCCGCCTTCTTCTTGGTaGTGCGGGACTGCCACTCCC +
Preference number: 4 (lower is better)
Translates to: CLFWDEGYQDNSAKCVAPPPSSW*CGTATP
Trigger: GGGAGTGGCAGTCCCGCACCACCAAGAAGAAGGCGG...CGGAGCCACACATTTGGCACTGTTATCTTGGTATCCCTCATCCCAGAAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp GCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTTCTGGGAAGGGCTCCTaGTGCTGCGGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: ATHAHDIILDNDWNGICSSGKGS*CCGCGP
Trigger: GGGACCGCAGCCGCAGCACCAGGAGCCCTTCCCAGA...AGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCTCCACAGGGCCTGGCTaGCTGCTGCTATCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSSTGPG*LLLSRD
Trigger: GTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGA...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR TCA 90 bp CAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTGCTGGATGTGTTGCTaGGCAGCCTGCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: QGVLVWVLVQNLLGLMTYCWMCC*AACWSL
Trigger: CAAGCTCCAGCAGGCTGCTCAGCAACACATCCAGCA...ATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCAGTCTCGGTCTTCGTTaGAGCGGGAGAAGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: FQVHIQLVFFALPTHGAASLGLR*SGRSGP
Trigger: CGGACCGCTTCTCCCGCTTCAACGAAGACCGAGACT...GGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR GCA 90 bp CACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGCTCCGCCCACTTCCTTaGTTTTATTTGGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: HSQGVLVWVLVQNLLGLMLRPLP*FYLAHQ
Trigger: CTGGTGAGCCAAATAAAAGCAAGGAAGTGGGCGGAG...CATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCGGCTGCTCCGTTTGGTaGCTGCTCTTCGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSGCSVW*LLFAGR
Trigger: CCTGCCAGCGAAGAGCAGGCACCAAACGGAGCAGCC...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR GCA 90 bp GGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGTCCCGACGCCCAGAATaGCTCTCCTCAGGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GTTSRCTFSLFSLLCQLMSRRPE*LSSGLS
Trigger: CGAGAGCCCTGAGGAGAGGCATTCTGGGCGTCGGGA...CATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAATCCCGACGCCCAGAATaGCTCTCCTCAGGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQSRRPE*LSSGLS
Trigger: CGAGAGCCCTGAGGAGAGGCATTCTGGGCGTCGGGA...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCCTCTTGTCTTCAGGACTaGAGTCACCTTCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: CVFCLRPMATPRLLLVQASCLQD*SHLLTL
Trigger: GAGGGTCAGAAGGTGACTGCAGTCCTGAAGACAAGA...GGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CTTCCACCACTAGAACAGCTTGGCCTTCCCTGTGGCGCTGAGAAGGCAAGACCAGTTTGGAGATGTTGCTaGAGAGGGGTGGGTAGCACT +
Preference number: 4 (lower is better)
Translates to: LPPLEQLGLPCGAEKARPVWRCC*RGVGST
Trigger: AGTGCTACCCACCCCTCTGCAGCAACATCTCCAAAC...TGGTCTTGCCTTCTCAGCGCCACAGGGAAGGCCAAGCTGTTCTAGTGGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp AGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGGAACGATGCGAGGAATaGCGCCGGCCAGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: SLFSLLCQLMEPPKGFFLERCEE*RRPDLE
Trigger: CTCAAGGTCTGGCCGGCGCCATTCCTCGCATCGTTC...CAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTGCCTACTTATTGCCAAGAGATaGGGGGAGCTTGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: YGRWLGPQGSSQNVLGCLLIAKR*GELGPK
Trigger: TTTGGGCCCAAGCTCCCCCCATCTCTTGGCAATAAG...TAGGCACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCCGAGCTTCCCTATCAGTaGAAGGACAGGCTTATTGCC +
Preference number: 4 (lower is better)
Translates to: CVFCLRPMATPRLLLVQAELPYQ*KDRLIA
Trigger: GGCAATAAGCCTGTCCTTCCACTGATAGGGAAGCTC...GGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTAGGGCTTTCGGGTAGCTaGGAGCTTCCCTATCAGTGG +
Preference number: 4 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALGLSGS*ELPYQW
Trigger: CCACTGATAGGGAAGCTCCCAGCTACCCGAAAGCCC...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CCA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTAGCTGCTGAATGTGGATaGGTTGCAGGGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALAAECG*VAGLVW
Trigger: CCACACCAGCCCTGCAACCCATCCACATTCAGCAGC...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CCA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATGAGGGTGAATGCCGATaGCGGCAGCAGCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDEGECR*RQQLRQ
Trigger: CTGCCGCAGCTGCTGCCGCCATCGGCATTCACCCTC...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR CAA 72 bp GGAAGCATCATCACTATCCTCATCTCCACTACTGGGTaGGCTCCGATGGCTAGACCGGCTGCTCCGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GSIITILISTTG*APMARPAAPFG
Trigger: ACCAAACGGAGCAGCCGGTCTAGCCATCGGAGCCAACCCAGTAGTGGAGATGAGGATAGTGATGATGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTACTGGTGCAGCCGGTGTaGGGAAGCATCATCACTATC +
Preference number: 4 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALLVQPV*GSIITI
Trigger: GATAGTGATGATGCTTCCTCACACCGGCTGCACCAG...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR TCA 90 bp CTTCCACCACTAGAACAGCTTGGCCTTCCCTGTGGCGCTGAGAAGGCAAGACCACTTGGAGTGCCTTCGTaGTCTGTCACTGTAGTCACT +
Preference number: 4 (lower is better)
Translates to: LPPLEQLGLPCGAEKARPLGVPS*SVTVVT
Trigger: AGTGACTACAGTGACAGATCACGAAGGCACTCCAAG...TGGTCTTGCCTTCTCAGCGCCACAGGGAAGGCCAAGCTGTTCTAGTGGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp TGGAAGTTAAAGAAAATGCCCCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTGCGGCCCCGGGATCTTaGGCGCTCTCTGGTATGACT +
Preference number: 4 (lower is better)
Translates to: WKLKKMPLGRQRGSQSMAAAPGS*ALSGMT
Trigger: AGTCATACCAGAGAGCGCTCAAGATCCCGGGGCCGC...AGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGGGGCATTTTCTTTAACTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp TGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCCGTAGCAGTTTGGCAGTaGCAGAGTTCTTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CVFCLRPMATPRLLLVQAVAVWQ*QSSCLQ
Trigger: CTGAAGACAAGAACTCTGTCACTGCCAAACTGCTAC...GGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp CTTCCACCACTAGAACAGCTTGGCCTTCCCTGTGGCGCTGAGAAGGCAAGACCAGCCAGTTGTTTCCTCTaGAGGGAACTGATGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LPPLEQLGLPCGAEKARPASCFL*RELMPK
Trigger: TTTGGGCATCAGTTCCCTTCAGAGGAAACAACTGGC...TGGTCTTGCCTTCTCAGCGCCACAGGGAAGGCCAAGCTGTTCTAGTGGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTAGTGGCCAGGGATGATTaGGTGAGTGAGGTGGGACAA +
Preference number: 4 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALVARDD*VSEVGQ
Trigger: TTGTCCCACCTCACTCACTCAATCATCCCTGGCCAC...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR TCA 90 bp CCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAGGACAGGGTGAAAGGTaGAGGGCCCAGGATGGATGG +
Preference number: 4 (lower is better)
Translates to: PRKAKRQPEYGSIYKLMGGQGER*RAQDGW
Trigger: CCATCCATCCTGGGCCCTTCACCTTTCACCCTGTCC...TCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAACAGCAAGTGCTCTGGTaGCAACCCACTGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGEQQVLW*QPTGQR
Trigger: CCTCTGGCCAGTGGGTTGTCACCAGAGCACTTGCTG...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCAGTCTCGGTCTTCGTTaGAGCGGGAGAAGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSSLGLR*SGRSGP
Trigger: CGGACCGCTTCTCCCGCTTCAACGAAGACCGAGACT...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR GCA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCGGCTGCTCCGTTTGGTaGCTGCTCTTCGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLAGINGSTPPREHLWVSGCSVW*LLFAGR
Trigger: CCTGCCAGCGAAGAGCAGGCACCAAACGGAGCAGCC...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR GCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCAGACCTTGAGCGGCTaGGGGAATGCTCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSQTLSG*GNAHCL
Trigger: CAGGCAGTGAGCATTCCCGCAGCCGCTCAAGGTCTG...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR GCA 90 bp GGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGAGCTGTGGGCTGTGGTaGTACGGCTTCTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GTTSRCTFSLFSLLCQLMSCGLW*YGFSAC
Trigger: GCAAGCGGAGAAGCCGTAGCACCACAGCCCACAGCT...CATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp GTGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATTACTGTCATCTCCTCTaGCATCATCTTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VVRDCHSQGVLVWVLVQNYCHLL*HHLSSQ
Trigger: CTGGGAAGAAAGATGATGGCAGAGGAGATGACAGTA...ATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CTTCCACCACTAGAACAGCTTGGCCTTCCCTGTGGCGCTGAGAAGGCAAGACCATTCCTGTGCCAATGTTaGTGTTCTGGGAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LPPLEQLGLPCGAEKARPFLCQC*CSGKVD
Trigger: GTCCACCTTCCCAGAACAGCAACATTGGCACAGGAA...TGGTCTTGCCTTCTCAGCGCCACAGGGAAGGCCAAGCTGTTCTAGTGGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCCCAAAGCTGATGCCTTaGGAGGCTAACCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FQVHIQLVFFALPTHGAAPKLMP*EANPGA
Trigger: GGCTCCTGGGTTAGCCTCCCAAGGCATCAGCTTTGG...GGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCATCTTTGCTCAAAACTaGGAAGAAGGGACCAGTAGG +
Preference number: 4 (lower is better)
Translates to: WCGTATPRGFWFGSSFRIIFAQN*EEGTSR
Trigger: CCTACTGGTCCCTTCTTCCCAGTTTTGAGCAAAGAT...GATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTCCAGGATCTAGGCCTTaGAGATGGTCCTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGPGSRP*RWSFEE
Trigger: CTCCTCAAAGGACCATCTCCAAGGCCTAGATCCTGG...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATGCTCCCCTCTTCAGCTaGGAGGGATCTCCGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDAPLFS*EGSPLG
Trigger: TCCCAGCGGAGATCCCTCCCAGCTGAAGAGGGGAGC...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATACCGGCTGCTCCGTTTaGTGCCTGCTCTTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDTGCSV*CLLFAG
Trigger: GCCAGCGAAGAGCAGGCACCAAACGGAGCAGCCGGT...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCCTGGGTTGGCTCCGATaGCTAGACCGGCTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: FHATHAHDIILDNDWNGILGWLR*LDRLLR
Trigger: ACGGAGCAGCCGGTCTAGCCATCGGAGCCAACCCAG...GATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAAGAACGATGCGAGGAATaGCGCCGGCCAGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQERCEE*RRPDLE
Trigger: CTCAAGGTCTGGCCGGCGCCATTCCTCGCATCGTTC...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGATCGGTGTTTGGAGCTaGCATAGTCTGAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: HSQGVLVWVLVQNLLGLMIGVWS*HSLSHL
Trigger: CAGATGACTCAGACTATGCCAGCTCCAAACACCGAT...CATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCGGGCTTTCGGGTAGCTaGGAGCTTCCCTATCAGTGG +
Preference number: 4 (lower is better)
Translates to: SACFLCSANSWSRRRAFSGLSGS*ELPYQW
Trigger: CCACTGATAGGGAAGCTCCCAGCTACCCGAAAGCCC...GGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTGCCTATGGGAGGTGCATAACTaGGGAAATGCTCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: YGRWLGPQGSSQNVLGCLWEVHN*GNAQGL
Trigger: CAGACCTTGAGCATTTCCCCAGTTATGCACCTCCCA...TAGGCACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp GGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGATGCACCTGGGCAAGTaGTTGGGGATGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GTTSRCTFSLFSLLCQLMMHLGK*LGMGVR
Trigger: CCTCACCCCCATCCCCAACCACTTGCCCAGGTGCAT...CATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCTCACGTGCCATGGCTaGGGGGATGTTGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSLTCHG*GDVAGP
Trigger: AGGACCTGCAACATCCCCCCAGCCATGGCACGTGAG...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CCA 90 bp ATCTGTGGAGAATTCAGATCCCAGGCCACAAGAAGCAGTGGCACCTGTGCCACTCCAAGGGAACATTTATaGGTCTCCTCCCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: ICGEFRSQATRSSGTCATPREHL*VSSPGP
Trigger: AGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGG...AGTGGCACAGGTGCCACTGCTTCTTGTGGCCTGGGATCTGAATTCTCCACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 72 bp GGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTaGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GTTSRCTFSLFS*LCQLMEPPKGF
Trigger: AAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
3UTR CAA 72 bp GCTCTTCGCTGGCAGGATGAAGGTGGAAGTTCACCTTaGTGTTTCCTCCCACCATGGTCTTGGGAGCTGCTA +
Preference number: 4 (lower is better)
Translates to: ALRWQDEGGSSP*CFLPPWSWELL
Trigger: TAGCAGCTCCCAAGACCATGGTGGGAGGAAACACAAAGGTGAACTTCCACCTTCATCCTGCCAGCGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCCGCTGGGAGTCATCTTaGGCTCTCCGCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SACFLCSANSWSRRRAFSRWESS*ALRLLL
Trigger: AAGAAGAAGGCGGAGAGCTCAAGATGACTCCCAGCG...GGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTTCTTCGCTGGCAGGATaGAGGTGGAAGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGSSLAG*RWKFTF
Trigger: AAAGGTGAACTTCCACCTTCATCCTGCCAGCGAAGA...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAATGCTGGATGTGTTGCTaGGCAGCCTGCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQCWMCC*AACWSL
Trigger: CAAGCTCCAGCAGGCTGCTCAGCAACACATCCAGCA...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp CTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGTTGCAGCTGCGGCAGCATaGTGTTGTAGGATGGCATGC +
Preference number: 4 (lower is better)
Translates to: LVFFALPTHGAAEGLFPVAAAAA*CCRMAC
Trigger: GCATGCCATCCTACAACATCATGCTGCCGCAGCTGC...AACAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCGCATGTGGGACAGGGTaGAAGGTGAAGGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLAGINGSTPPREHLWVSACGTG*KVKGPG
Trigger: TCCTGGGCCCTTCACCTTTCACCCTGTCCCACATGC...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR TCA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTAATATCAGGTTCCAGGTaGGACGCTTTCCACCTCACC +
Preference number: 4 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALISGSR*DAFHLT
Trigger: GGTGAGGTGGAAAGCGTCTCACCTGGAACCTGATAT...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTGCCTAGGGACCACTTCCAGGTaGACATTCAGCTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: YGRWLGPQGSSQNVLGCLGTTSR*TFSLFS
Trigger: AGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCC...TAGGCACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATCTACCCCCAGGCTCCTaGTTGTTCAGGCCGCTACAG +
Preference number: 4 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDLPPGS*LFRPLQ
Trigger: CTGTAGCGGCCTGAACAAGCAGGAGCCTGGGGGTAG...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTACATCCTTTTTGCCACTaGTCCCCTCTTCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALHPFCH*SPLQLG
Trigger: TCCCAGCTGAAGAGGGGAGCAGTGGCAAAAAGGATG...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR GCA 90 bp TGCCTCTTCTGGGATGAGGGATACCAAGATAACAGTGCCAAATGTGTGGCTCCGGATGGAGACTTCTGGTaGAGCCGGTGTGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: CLFWDEGYQDNSAKCVAPDGDFW*SRCEEA
Trigger: TGCTTCCTCACACCGGCTGCACCAGAAGTCTCCATC...CGGAGCCACACATTTGGCACTGTTATCTTGGTATCCCTCATCCCAGAAGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATCAGACCTTGAGCGGCTaGGGGAATGCTCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDQTLSG*GNAHCL
Trigger: CAGGCAGTGAGCATTCCCGCAGCCGCTCAAGGTCTG...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCCGCCGGGAGGAACGATaGGAGGAATGGCGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: LLSKLSWAEGMETMKQNIRREER*EEWRRP
Trigger: TGGCCGGCGCCATTCCTCGCATCGTTCCTCCCGGCG...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp CACCTTTGGGTCAGTGTGTTAATTAGGGCTGAGAGCCTGGGTGAAAGGCAAGAACAGAATGTGCTGGGGTaGCTAGTGGAGCCACAGGGT +
Preference number: 4 (lower is better)
Translates to: HLWVSVLIRAESLGERQEQNVLG*LVEPQG
Trigger: ACCCTGTGGCTCCACTAGGCACCCCAGCACATTCTG...TTCTTGCCTTTCACCCAGGCTCTCAGCCCTAATTAACACACTGACCCAAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGCCTGGCTGACTGCTaGTATCCAGGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSSISMRPMPMTSYLTTIGLADC*YPGTPG
Trigger: CCCTGGAGTCCCTGGATAGCAGCAGTCAGCCAGGCC...AATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp ATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACGGGGGTGAGGGTGAATaGCGATGGCGGCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: IIKLHFHATHAHDIILDNGGEGE*RWRQQL
Trigger: CAGCTGCTGCCGCCATCGGCATTCACCCTCACCCCC...GTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGCTAACCCAGGAGCCTaGGCCAGTCCAGTGGTATTA +
Preference number: 4 (lower is better)
Translates to: FQVHIQLVFFALPTHGAAANPGA*ASPVVL
Trigger: TAATACCACTGGACTGGCCCAGGCTCCTGGGTTAGC...GGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGGGCTCGGTCATGCTaGTTTCCTTCGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PRKAKRQPEYGSIYKLMGRARSC*FPSAAQ
Trigger: CTGAGCAGCCGAAGGAAACCAGCATGACCGAGCCCT...TCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCCTCTCCGCCTTCTTCTTaGTGGTGCGGGACTGCCACT +
Preference number: 4 (lower is better)
Translates to: PMPMTSYLTTIGMGSVLPSPPSS*WCGTAT
Trigger: AGTGGCAGTCCCGCACCACCAAGAAGAAGGCGGAGA...GGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGATCTCCGCCTTCTTCTTaGTGGTGCGGGACTGCCACT +
Preference number: 4 (lower is better)
Translates to: PRKAKRQPEYGSIYKLMGSPPSS*WCGTAT
Trigger: AGTGGCAGTCCCGCACCACCAAGAAGAAGGCGGAGA...TCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACTGGGTTGGCTCCGATaGCTAGACCGGCTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPLGWLR*LDRLLR
Trigger: ACGGAGCAGCCGGTCTAGCCATCGGAGCCAACCCAG...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CTTCCACCACTAGAACAGCTTGGCCTTCCCTGTGGCGCTGAGAAGGCAAGACCAATCGGTGTTTGGAGCTaGCATAGTCTGAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: LPPLEQLGLPCGAEKARPIGVWS*HSLSHL
Trigger: CAGATGACTCAGACTATGCCAGCTCCAAACACCGAT...TGGTCTTGCCTTCTCAGCGCCACAGGGAAGGCCAAGCTGTTCTAGTGGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCCCCAAAGTAACCTTGTaGGGGGTCCTTGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FQVHIQLVFFALPTHGAAPKVTL*GVLELG
Trigger: CCCAAGCTCAAGGACCCCCCACAAGGTTACTTTGGG...GGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAAGGGTGTCCCCATCACTaGGGTCGGGGAGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQGCPHH*GRGGSY
Trigger: ATAACTACCTCCCCGACCCCAGTGATGGGGACACCC...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp AAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCGGCAGAGGCTGTAGCTaGCTGCTGAATGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: KAKRQPEYGSIYKLMGSSGRGCS*LLNVDG
Trigger: CCCATCCACATTCAGCAGCCAGCTACAGCCTCTGCC...GCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTATGATGTGGATGGGATaGCTAGCGAGAAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGMMWMG*LARKVA
Trigger: TGCCACCTTTCTCGCTAGCCATCCCATCCACATCAT...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp GCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTGTGAAGGGCCCAGGATaGATGGCTGAGGCGGGAATG +
Preference number: 4 (lower is better)
Translates to: ATHAHDIILDNDWNGICSVKGPG*MAEAGM
Trigger: CATTCCCGCCTCAGCCATCCATCCTGGGCCCTTCAC...AGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 72 bp CCCAGGAGCCTGGGCCAGTCCAGTGGTATTAGTGATTaGTACTGCAGTGAAAGGGCCTCCTTTATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PRSLGQSSGISD*YCSERASFICG
Trigger: TCCACAGATAAAGGAGGCCCTTTCACTGCAGTACAAATCACTAATACCACTGGACTGGCCCAGGCTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAATTTGCTTCCTGGTTCTaGGGGCTCGGTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGEFASWF*GLGHAG
Trigger: ACCAGCATGACCGAGCCCTCAGAACCAGGAAGCAAA...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp TCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCGGGACTGGCTGCAACTaGGGCTATAGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: SACFLCSANSWSRRRAFSGTGCN*GYSHHQ
Trigger: CTGATGATGACTATAGCCTCAGTTGCAGCCAGTCCC...GGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGAGCGCTCTCTGGTATaGCTCCGAGATCGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: SSSISMRPMPMTSYLTTIERSLV*LRDRLR
Trigger: CCGAAGCCGATCTCGGAGTCATACCAGAGAGCGCTC...AATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTGCGGCCCCGGGATCTTaGGCGCTCTCTGGTATGACT +
Preference number: 4 (lower is better)
Translates to: LGPRSESAGADDLFFFRFAAPGS*ALSGMT
Trigger: AGTCATACCAGAGAGCGCTCAAGATCCCGGGGCCGC...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTTCCACAGGGCCTGGCTaGCTGCTGCTATCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LGPRSESAGADDLFFFRFSTGPG*LLLSRD
Trigger: GTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGA...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TGGAAGTTAAAGAAAATGCCCCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCCCAGGATGGATGGCTaGGGCGGGAATGATGTGGAT +
Preference number: 4 (lower is better)
Translates to: WKLKKMPLGRQRGSQSMAPRMDG*GGNDVD
Trigger: ATCCACATCATTCCCGCCTCAGCCATCCATCCTGGG...AGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGGGGCATTTTCTTTAACTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCAGCATGTGGGACAGGGTaGAAGGTGAAGGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPACGTG*KVKGPG
Trigger: TCCTGGGCCCTTCACCTTTCACCCTGTCCCACATGC...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp GGATCTGTTCTCCCACTGCTAAGATTACCATCACCACAACAAGTCCAGGATCATAGTCTCGGTCTTCGTTaGAGCGGGAGAAGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: GSVLPLLRLPSPQQVQDHSLGLR*SGRSGP
Trigger: CGGACCGCTTCTCCCGCTTCAACGAAGACCGAGACT...ATGATCCTGGACTTGTTGTGGTGATGGTAATCTTAGCAGTGGGAGAACAGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586037.5
ENST00000592746.5
CDS-3UTR GCA 90 bp TTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCTGCTCCTTGGCTTGCTaGCGCCTTGATGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: FQVHIQLVFFALPTHGAACSLAC*RLDAAF
Trigger: AAAAGCTGCATCAAGGCGGCAGCAAGCCAAGGAGCA...GGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TGCCTCTTCTGGGATGAGGGATACCAAGATAACAGTGCCAAATGTGTGGCTCCGCAGGTGCGTCCATTCTaGCTCCTGAGGAACGTACTA +
Preference number: 4 (lower is better)
Translates to: CLFWDEGYQDNSAKCVAPQVRPF*LLRNVL
Trigger: TAGTACGTTCCTCAGGAGGCAGAATGGACGCACCTG...CGGAGCCACACATTTGGCACTGTTATCTTGGTATCCCTCATCCCAGAAGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTCTACCCCCAGGCTCCTaGTTGTTCAGGCCGCTACAG +
Preference number: 4 (lower is better)
Translates to: SSSISMRPMPMTSYLTTILPPGS*LFRPLQ
Trigger: CTGTAGCGGCCTGAACAAGCAGGAGCCTGGGGGTAG...AATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp AAACAGCAAAAGTACATGAGGGAGACTGTTAAAGATGAGCATCCCTCAGAAGCCTTGGTGGTGCGGGACTaGCACTCCCAGGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KQQKYMRETVKDEHPSEALVVRD*HSQGVL
Trigger: CAGAACCCCCTGGGAGTGGCAGTCCCGCACCACCAA...GGCTTCTGAGGGATGCTCATCTTTAACAGTCTCCCTCATGTACTTTTGCTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp ACGGCGCCGTTCGGTAGCATCTTCAGCATAATCAAGCTCCATTTCCATGCGACCTTCCTGTGCCAATGTTaGTGTTCTGGGAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: TAPFGSIFSIIKLHFHATFLCQC*CSGKVD
Trigger: GTCCACCTTCCCAGAACAGCAACATTGGCACAGGAA...GGTCGCATGGAAATGGAGCTTGATTATGCTGAAGATGCTACCGAACGGCGCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCCTGCAGAATGTGCTGGGGTaGCTAGTGGAGCCACAGGGT +
Preference number: 4 (lower is better)
Translates to: HAHDIILDNDWNGICSPLQNVLG*LVEPQG
Trigger: ACCCTGTGGCTCCACTAGGCACCCCAGCACATTCTG...CAGGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCGGGGGTGAGGGTGAATaGCGATGGCGGCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLSKLSWAEGMETMKQNIGGEGE*RWRQQL
Trigger: CAGCTGCTGCCGCCATCGGCATTCACCCTCACCCCC...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAAAAGTGCAGTGGCAGCTaGTGCAGCAGGCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKKCSGS*CSRPWS
Trigger: GCTCCACGGCCTGCTGCAGCAGCTGCCACTGCACTT...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp AGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGTCCCTTGGGTGAAGGTGAAGTaGAGTGGCAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SPWSELFSSGFVPSSEVPWVKVK*SGSCCS
Trigger: GCTGCAGCAGCTGCCACTGCACTTCACCTTCACCCA...AGGGACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp AAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAGCGGTCCGCCATTTTaGCGCCTTCACTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: KLHFHATHAHDIILDNDWSGPPF*RLHSSQ
Trigger: CTGAGAGGAGTGAAGGCGGCAAAATGGCGGACCGCT...CCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000592746.5
CDS-3UTR CCA 90 bp AGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGTCCCTTCTCCACTACTGGGTTaGCTCCGATGGCTAGACCGG +
Preference number: 4 (lower is better)
Translates to: SPWSELFSSGFVPSSEVPSPLLG*LRWLDR
Trigger: CCGGTCTAGCCATCGGAGCCAACCCAGTAGTGGAGA...AGGGACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TGCCTCTTCTGGGATGAGGGATACCAAGATAACAGTGCCAAATGTGTGGCTCCGGAGTCATCTGAGTCATaGGAGCGCTTGGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: CLFWDEGYQDNSAKCVAPESSES*ERLECL
Trigger: AAGGCACTCCAAGCGCTCCCATGACTCAGATGACTC...CGGAGCCACACATTTGGCACTGTTATCTTGGTATCCCTCATCCCAGAAGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTCCCATGATCTCTTCCTaGAGCCTGATCTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: QLVFFALPTHGAAEGLFPPMISS*SLISGK
Trigger: CTTCCCAGAGATCAGGCTCCAGGAAGAGATCATGGG...AGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCCAAAGTAACCTTGTaGGGGGTCCTTGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSPKVTL*GVLELG
Trigger: CCCAAGCTCAAGGACCCCCCACAAGGTTACTTTGGG...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCGGTAGTTATGGGAGATaGTTGGGTCCCCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSGSYGR*LGPQGS
Trigger: GCTACCCTGGGGACCCAACCATCTCCCATAACTACC...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CCA 90 bp TGCCTCTTCTGGGATGAGGGATACCAAGATAACAGTGCCAAATGTGTGGCTCCGAGGCCTTTACTTGCTTaGCCAGAAGCTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: CLFWDEGYQDNSAKCVAPRPLLA*PEAAAG
Trigger: TCCAGCAGCAGCTTCTGGCCAAGCAAGTAAAGGCCT...CGGAGCCACACATTTGGCACTGTTATCTTGGTATCCCTCATCCCAGAAGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp ACATGGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTGGCAGAGGCTGTAGCTaGCTGCTGAATGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: TWDHFQVHIQLVFFALPTGRGCS*LLNVDG
Trigger: CCCATCCACATTCAGCAGCCAGCTACAGCCTCTGCC...AGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCAGAAGGTGAAGTGCAGTaGCAGCTGCTGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPEGEVQ*QLLQQA
Trigger: GGCCTGCTGCAGCAGCTGCCACTGCACTTCACCTTC...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATATGGGTCTCCTCCCCTaGCCCTACCTAGGATCCCAT +
Preference number: 4 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDMGLLP*PYLGSH
Trigger: ATGGGATCCTAGGTAGGGCCAGGGGAGGAGACCCAT...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CCAGCTGACTGCTGCCCATTAGCTCAAAAATCCCAATACTGGGGGCACTACATACCAAGGGAACATTTATaGGTCTCCTCCCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PADCCPLAQKSQYWGHYIPREHL*VSSPGP
Trigger: AGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGG...TATGTAGTGCCCCCAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CCAGCTGACTGCTGCCCATTAGCTCAAAAATCCCAATACTGGGGGCACTACATAGAACAGGTAGGAGGGTaGGAGGGCAGTCAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: PADCCPLAQKSQYWGHYIEQVGG*EGSQEL
Trigger: CAACTCTTGACTGCCCTCCCACCCTCCTACCTGTTC...TATGTAGTGCCCCCAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp GGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGCCACTGTGGTTGGTTTaGACATGGGACCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: GTTSRCTFSLFSLLCQLMPLWLV*TWDHFQ
Trigger: CTGGAAGTGGTCCCATGTTCAAACCAACCACAGTGG...CATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR TCA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAGGGACCCTCCATCCTaGGGGTCTTCATCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGERDPPS*GSSSSF
Trigger: AAAAGAGGATGAAGACCCTCAGGATGGAGGGTCCCT...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp AGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGTCCCTTTTGCTTCCTGGTTCTaGGGGCTCGGTCATGCTGGT +
Preference number: 4 (lower is better)
Translates to: SPWSELFSSGFVPSSEVPFASWF*GLGHAG
Trigger: ACCAGCATGACCGAGCCCTCAGAACCAGGAAGCAAA...AGGGACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp ACGGCGCCGTTCGGTAGCATCTTCAGCATAATCAAGCTCCATTTCCATGCGACCGTCCATTCTGCCTCCTaGGGAACGTACTATTTTCTC +
Preference number: 4 (lower is better)
Translates to: TAPFGSIFSIIKLHFHATVHSAS*GTYYFL
Trigger: GAGAAAATAGTACGTTCCTCAGGAGGCAGAATGGAC...GGTCGCATGGAAATGGAGCTTGATTATGCTGAAGATGCTACCGAACGGCGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTAGTCCATTCTGCCTCCTaGGGAACGTACTATTTTCTC +
Preference number: 4 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALVHSAS*GTYYFL
Trigger: GAGAAAATAGTACGTTCCTCAGGAGGCAGAATGGAC...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR TCA 90 bp CAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTCTTGGAGTGCCTTCGTaGTCTGTCACTGTAGTCACT +
Preference number: 4 (lower is better)
Translates to: QLVFFALPTHGAAEGLFPLGVPS*SVTVVT
Trigger: AGTGACTACAGTGACAGATCACGAAGGCACTCCAAG...AGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAGGGACTGGCTGCAACTaGGGCTATAGTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGEGTGCN*GYSHHQ
Trigger: CTGATGATGACTATAGCCTCAGTTGCAGCCAGTCCC...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp TGGGATAACGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGGAGCGCTCTCTGGTATaGCTCCGAGATCGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: WDNVTSPKMVKDTTPKWWERSLV*LRDRLR
Trigger: CCGAAGCCGATCTCGGAGTCATACCAGAGAGCGCTC...CCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACGTTATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp ACATGGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTAGTGGAGCCACAGGGTaGTCAGCAGTAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TWDHFQVHIQLVFFALPTSGATG*SAVASP
Trigger: TGGAGAAGCTACTGCTGATCACCCTGTGGCTCCACT...AGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCAGCAGCTGCGGCAGCATaGTGTTGTAGGATGGCATGC +
Preference number: 4 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPAAAAA*CCRMAC
Trigger: GCATGCCATCCTACAACATCATGCTGCCGCAGCTGC...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTGTGGCCAGGGATGATTaGGTGAGTGAGGTGGGACAA +
Preference number: 4 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVVARDD*VSEVGQ
Trigger: TTGTCCCACCTCACTCACTCAATCATCCCTGGCCAC...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp AAACAGCAAAAGTACATGAGGGAGACTGTTAAAGATGAGCATCCCTCAGAAGCCCCTTCCCTGTGGCGCTaGGAAGGCAAGACCAGATGG +
Preference number: 4 (lower is better)
Translates to: KQQKYMRETVKDEHPSEAPSLWR*EGKTRW
Trigger: CCATCTGGTCTTGCCTTCTCAGCGCCACAGGGAAGG...GGCTTCTGAGGGATGCTCATCTTTAACAGTCTCCCTCATGTACTTTTGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCATCAGAAGCCCCCAGCTaGCTGCTGCCCATTAGCTCA +
Preference number: 4 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPSEAPS*LLPISS
Trigger: TGAGCTAATGGGCAGCAGTCAGCTGGGGGCTTCTGA...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAGTTTACTGTCTAAACTaGGCTGGGCAGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGEVYCLN*AGQRAW
Trigger: CCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAAAC...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCCCGAGCAAACTCTCTCTaGTTCAGATCTTTTAATCTC +
Preference number: 4 (lower is better)
Translates to: CVFCLRPMATPRLLLVQARANSL*FRSFNL
Trigger: GAGATTAAAAGATCTGAAGCAGAGAGAGTTTGCTCG...GGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTTCTGCTCCTTGGCTTaGTGCCGCCTTGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLAGINGSTPPREHLWVSFCSLA*CRLDAA
Trigger: AGCTGCATCAAGGCGGCAGCAAGCCAAGGAGCAGAA...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR GCA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTTGGCTTTCTTTCCCTaGTGGGGTGGCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLAGINGSTPPREHLWVSLAFFP*WGGQRG
Trigger: ACCTCTCTGGCCACCCCAGCAGGGAAAGAAAGCCAA...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR GCA 90 bp GGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGCATCCTTTTTGCCACTaGTCCCCTCTTCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GTTSRCTFSLFSLLCQLMHPFCH*SPLQLG
Trigger: TCCCAGCTGAAGAGGGGAGCAGTGGCAAAAAGGATG...CATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp AGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGTCCCTGATGGAGACTTCTGGTaGAGCCGGTGTGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SPWSELFSSGFVPSSEVPDGDFW*SRCEEA
Trigger: TGCTTCCTCACACCGGCTGCACCAGAAGTCTCCATC...AGGGACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCAGAGCGGCTGCGGGAATaGTCACTGCCTGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPERLRE*SLPESS
Trigger: GGAAGATTCAGGCAGTGAGCATTCCCGCAGCCGCTC...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTTGGGAGCGCTTGGAGTaGCTTCGTGATCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVWERLE*LRDLSL
Trigger: CAGTGACAGATCACGAAGGCACTCCAAGCGCTCCCA...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTTATTAGGGGTGGCCTaGACCTCCTCACTCACACTA +
Preference number: 4 (lower is better)
Translates to: SACFLCSANSWSRRRAFSLLGVA*TSSLTL
Trigger: TAGTGTGAGTGAGGAGGTGCAGGCCACCCCTAATAA...GGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TGGGATAACGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCAGGGCCTGGCTGACTaGTGCTATCCAGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: WDNVTSPKMVKDTTPKWWQGLAD*CYPGTP
Trigger: TGGAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTG...CCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACGTTATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAACAGCCTGCTGGAGCTTaGTGTACTTCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQQPAGA*CTSPSP
Trigger: AGGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTG...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAAGGCCACAAGAAGCAGTaGCACCTGTGCCACTATTTG +
Preference number: 4 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQGHKKQ*HLCHYL
Trigger: CAAATAGTGGCACAGGTGCCACTGCTTCTTGTGGCC...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCGGCCTCCTTTATCTGTaGAGAATTCAGATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SACFLCSANSWSRRRAFSGLLYL*RIQIPG
Trigger: GCCTGGGATCTGAATTCTCCACAGATAAAGGAGGCC...GGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TGGAAGTTAAAGAAAATGCCCCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTGCTAACCCAGGAGCCTaGGCCAGTCCAGTGGTATTA +
Preference number: 4 (lower is better)
Translates to: WKLKKMPLGRQRGSQSMAANPGA*ASPVVL
Trigger: TAATACCACTGGACTGGCCCAGGCTCCTGGGTTAGC...AGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGGGGCATTTTCTTTAACTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TTTACTCTTTTGAGAATTTGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTCCAAAGCTGATGCCTTaGGAGGCTAACCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FTLLRICEGRNRALAQVSPKLMP*EANPGA
Trigger: GGCTCCTGGGTTAGCCTCCCAAGGCATCAGCTTTGG...ACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGGGCTCGGTCATGCTaGTTTCCTTCGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: YLLQSLVRTLLIGFCSIFRARSC*FPSAAQ
Trigger: CTGAGCAGCCGAAGGAAACCAGCATGACCGAGCCCT...GAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATGCTTTCTTTCCCTGCTaGGGTGGCCAGAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDAFFPC*GGQRGF
Trigger: GAAACCTCTCTGGCCACCCCAGCAGGGAAAGAAAGC...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CACCTTTGGGTCAGTGTGTTAATTAGGGCTGAGAGCCTGGGTGAAAGGCAAGAACCAGGATCTAGGCCTTaGAGATGGTCCTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: HLWVSVLIRAESLGERQEPGSRP*RWSFEE
Trigger: CTCCTCAAAGGACCATCTCCAAGGCCTAGATCCTGG...TTCTTGCCTTTCACCCAGGCTCTCAGCCCTAATTAACACACTGACCCAAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp GACTCTTCTGGGGGTGGGTCTAATAAGGGGCCAGTTGTTTCCTCTGAAGGGAACTTCTTTTTGTGCCGGTaGGACTTCCCAGATCGTTCT +
Preference number: 4 (lower is better)
Translates to: DSSGGGSNKGPVVSSEGNFFLCR*DFPDRS
Trigger: AGAACGATCTGGGAAGTCCCACCGGCACAAAAAGAA...GTTCCCTTCAGAGGAAACAACTGGCCCCTTATTAGACCCACCCCCAGAAGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTACTCCCAGGGGGTTCTaGTTTGGGTCCTCGTTCAGA +
Preference number: 4 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVTPRGF*FGSSFR
Trigger: TCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGT...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CACCTTTGGGTCAGTGTGTTAATTAGGGCTGAGAGCCTGGGTGAAAGGCAAGAATGTTTCCTCCCACCATaGTCTTGGGAGCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: HLWVSVLIRAESLGERQECFLPP*SWELLP
Trigger: TGGTAGCAGCTCCCAAGACCATGGTGGGAGGAAACA...TTCTTGCCTTTCACCCAGGCTCTCAGCCCTAATTAACACACTGACCCAAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCATCTCCACTACTGGGTTaGCTCCGATGGCTAGACCGG +
Preference number: 4 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPSPLLG*LRWLDR
Trigger: CCGGTCTAGCCATCGGAGCCAACCCAGTAGTGGAGA...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATCTCACTGTACTGGGATaGAGACTTCTGGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDLTVLG*RLLVQP
Trigger: CGGCTGCACCAGAAGTCTCCATCCCAGTACAGTGAG...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp AAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCAGTCATGGGAGCGCTTaGAGTGCCTTCGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: KAKRQPEYGSIYKLMGSSSHGSA*SAFVIC
Trigger: ACAGATCACGAAGGCACTCCAAGCGCTCCCATGACT...GCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCGAGTCATCTGAGTCATaGGAGCGCTTGGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSESSES*ERLECL
Trigger: AAGGCACTCCAAGCGCTCCCATGACTCAGATGACTC...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CCA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAAATCTTGAGCGCTCTCTaGTATGACTCCGAGATCGGC +
Preference number: 4 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQILSAL*YDSEIG
Trigger: GCCGATCTCGGAGTCATACCAGAGAGCGCTCAAGAT...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAACTCCGTTGCCAGCTGTaGGCTGTGGTGCTACGGCTT +
Preference number: 4 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKLRCQL*AVVLRL
Trigger: AAGCCGTAGCACCACAGCCCACAGCTGGCAACGGAG...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TGCCTCTTCTGGGATGAGGGATACCAAGATAACAGTGCCAAATGTGTGGCTCCGCCAATGTTGCTGTTCTaGGAAGGTGGACCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: CLFWDEGYQDNSAKCVAPPMLLF*EGGPVA
Trigger: AGCAACAGGTCCACCTTCCCAGAACAGCAACATTGG...CGGAGCCACACATTTGGCACTGTTATCTTGGTATCCCTCATCCCAGAAGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CCAGCTGACTGCTGCCCATTAGCTCAAAAATCCCAATACTGGGGGCACTACATACTTATTGCCAAGAGATaGGGGGAGCTTGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: PADCCPLAQKSQYWGHYILIAKR*GELGPK
Trigger: TTTGGGCCCAAGCTCCCCCCATCTCTTGGCAATAAG...TATGTAGTGCCCCCAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp GCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTGTTATGGGAGATGGTTaGGTCCCCAGGGTAGCAGTC +
Preference number: 4 (lower is better)
Translates to: ATHAHDIILDNDWNGICSVMGDG*VPRVAV
Trigger: GACTGCTACCCTGGGGACCCAACCATCTCCCATAAC...AGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TGGGATAACGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGATGCACCTGGGCAAGTaGTTGGGGATGGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: WDNVTSPKMVKDTTPKWWMHLGK*LGMGVR
Trigger: CCTCACCCCCATCCCCAACCACTTGCCCAGGTGCAT...CCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACGTTATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCCTGGTGACAACCCACTaGCCAGAGGGGAGGAAAATG +
Preference number: 4 (lower is better)
Translates to: LLAGINGSTPPREHLWVSLVTTH*PEGRKM
Trigger: CATTTTCCTCCCCTCTGGCCAGTGGGTTGTCACCAG...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR CAA 72 bp TCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTaGTTCCATCTTCAGAGGTCCCTTCCTCCGCATGGT +
Preference number: 4 (lower is better)
Translates to: SAVLGQNSSHRV*FHLQRSLPPHG
Trigger: ACCATGCGGAGGAAGGGACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 72 bp TATAGCAGCTCTGGTCTGAAGAGGCATCTGAGCTACTaGAGTAAGAACGCCGGGAGGAACGATGCGAGGAAT +
Preference number: 4 (lower is better)
Translates to: YSSSGLKRHLSY*SKNAGRNDARN
Trigger: ATTCCTCGCATCGTTCCTCCCGGCGTTCTTACTCAAGTAGCTCAGATGCCTCTTCAGACCAGAGCTGCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCCCACTGTGGTTGGTTTaGACATGGGACCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: FHATHAHDIILDNDWNGIPLWLV*TWDHFQ
Trigger: CTGGAAGTGGTCCCATGTTCAAACCAACCACAGTGG...GATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR TCA 90 bp AAACAGCAAAAGTACATGAGGGAGACTGTTAAAGATGAGCATCCCTCAGAAGCCTCCTCAGGGCTCTCGTaGCCCCATGATCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KQQKYMRETVKDEHPSEASSGLS*PHDLFL
Trigger: CAGGAAGAGATCATGGGGTCACGAGAGCCCTGAGGA...GGCTTCTGAGGGATGCTCATCTTTAACAGTCTCCCTCATGTACTTTTGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp AAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCTCCTCTGAAGGGAACTaGTGCCCAAATAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: KAKRQPEYGSIYKLMGSSSSEGN*CPNRAS
Trigger: TGATGCCCTATTTGGGCATCAGTTCCCTTCAGAGGA...GCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp TTTACTCTTTTGAGAATTTGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTAGCTTCTCCAGACTTTaGCTCTTCTGGGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: FTLLRICEGRNRALAQVSSFSRL*LFWGWV
Trigger: GACCCACCCCCAGAAGAGTCAAAGTCTGGAGAAGCT...ACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp TTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCCTCAGCCCCATCTGTTaGCTCAATACTAGGATCCCC +
Preference number: 4 (lower is better)
Translates to: FHATHAHDIILDNDWNGILSPIC*LNTRIP
Trigger: GGGGATCCTAGTATTGAGTCAACAGATGGGGCTGAG...GATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAATGTGTGGCTCCGTTaGTGTGGGAACTGGATGGAA +
Preference number: 4 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGENVWLR*CGNWME
Trigger: TTCCATCCAGTTCCCACATCAACGGAGCCACACATT...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp CCAGCTGACTGCTGCCCATTAGCTCAAAAATCCCAATACTGGGGGCACTACATAGAATCAGATGAGTACTaGACAGGTAGGAGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PADCCPLAQKSQYWGHYIESDEY*TGRRVG
Trigger: TCCCACCCTCCTACCTGTTCAGTACTCATCTGATTC...TATGTAGTGCCCCCAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp ATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCACTGCTAAGATTACCAGTCTCGGTCTTCGTTaGAGCGGGAGAAGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: IILDNDWNGICSPTAKITSLGLR*SGRSGP
Trigger: CGGACCGCTTCTCCCGCTTCAACGAAGACCGAGACT...GGTAATCTTAGCAGTGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586037.5
ENST00000592746.5
CDS-3UTR TCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCGGATCTGTTCTCCCCTaGAGAGATTTTCCCAATCCC +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSGSVLP*RDFPNP
Trigger: GGGATTGGGAAAATCTCTTCAGGGGAGAACAGATCC...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR GCA 90 bp TATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTGCCTAATTAGTGATTTGTACTaGAGTGAAAGGGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: YGRWLGPQGSSQNVLGCLISDLY*SERASF
Trigger: AAAGGAGGCCCTTTCACTGCAGTACAAATCACTAAT...TAGGCACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAGAGTCTCCTACCTTCTaGAGTCCTTGGTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: PRKAKRQPEYGSIYKLMGESPTF*SPWSEL
Trigger: GAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC...TCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp AAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACTAACTGTCTTTTCTaGTCCTTGGCTTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: KAKRQPEYGSIYKLMGSSTNCLF*SLACCR
Trigger: GCGGCAGCAAGCCAAGGAGCAGAAAAGACAGTTAGT...GCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp ATCACACAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATCCTTCTTCTTGGTGGTaGGGGACTGCCACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ITQFTIKVGSEVFQGFGNPSSWW*GTATPR
Trigger: CCTGGGAGTGGCAGTCCCGCACCACCAAGAAGAAGG...ATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTGTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCCCTTCTTCTTGGTGGTaGGGGACTGCCACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLSKLSWAEGMETMKQNIPSSWW*GTATPR
Trigger: CCTGGGAGTGGCAGTCCCGCACCACCAAGAAGAAGG...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTCATGGTCTTGGGAGCTaGTACCACCCCCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: SSSISMRPMPMTSYLTTIHGLGS*YHPHLH
Trigger: ATGAAGGTGGGGGTGGTAGCAGCTCCCAAGACCATG...AATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TTTACTCTTTTGAGAATTTGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTCATGGTCTTGGGAGCTaGTACCACCCCCACCTTCAT +
Preference number: 4 (lower is better)
Translates to: FTLLRICEGRNRALAQVSHGLGS*YHPHLH
Trigger: ATGAAGGTGGGGGTGGTAGCAGCTCCCAAGACCATG...ACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTGAGCGGCTGCGGGAATaGTCACTGCCTGAATCTTCC +
Preference number: 4 (lower is better)
Translates to: LGPRSESAGADDLFFFRFERLRE*SLPESS
Trigger: GGAAGATTCAGGCAGTGAGCATTCCCGCAGCCGCTC...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCAGCTGTGGGCTGTGGTaGTACGGCTTCTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: LLSKLSWAEGMETMKQNISCGLW*YGFSAC
Trigger: GCAAGCGGAGAAGCCGTAGCACCACAGCCCACAGCT...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAATTATTAGGGGTGGCCTaGACCTCCTCACTCACACTA +
Preference number: 4 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQLLGVA*TSSLTL
Trigger: TAGTGTGAGTGAGGAGGTGCAGGCCACCCCTAATAA...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp CCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAATGCTCAAGGTCTGGTaGTATAGGCAGCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PRKAKRQPEYGSIYKLMGMLKVW*YRQQAG
Trigger: TCCAGCTTGCTGCCTATAGCACCAGACCTTGAGCAT...TCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TGGGATAACGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGTGGGTGAAGGTGAAGTaGAGTGGCAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WDNVTSPKMVKDTTPKWWWVKVK*SGSCCS
Trigger: GCTGCAGCAGCTGCCACTGCACTTCACCTTCACCCA...CCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACGTTATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAATGGGCCCACAGCAAGTaGTCTGGTGACAACCCACTG +
Preference number: 4 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKWAHSK*SGDNPL
Trigger: CAGTGGGTTGTCACCAGAGCACTTGCTGTGGGCCCA...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TGGAAGTTAAAGAAAATGCCCCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCCCCCAGCTGACTGCTaGCCATTAGCTCAAAAATCC +
Preference number: 4 (lower is better)
Translates to: WKLKKMPLGRQRGSQSMAPPADC*PLAQKS
Trigger: GGATTTTTGAGCTAATGGGCAGCAGTCAGCTGGGGG...AGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGGGGCATTTTCTTTAACTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCGGCAAATGGACTGACTaGCTGGAACAAGGTACCCAG +
Preference number: 4 (lower is better)
Translates to: LLAGINGSTPPREHLWVSGKWTD*LEQGTQ
Trigger: CTGGGTACCTTGTTCCAGGCAGTCAGTCCATTTGCC...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAAGGAGATGGGACCTaGAACACAAGCACCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGEKGDGT*NTSTFG
Trigger: CCCAAAGGTGCTTGTGTTGCAGGTCCCATCTCCTTT...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CCAGCTGACTGCTGCCCATTAGCTCAAAAATCCCAATACTGGGGGCACTACATAGGCCTCCTTTATCTGTaGAGAATTCAGATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PADCCPLAQKSQYWGHYIGLLYL*RIQIPG
Trigger: GCCTGGGATCTGAATTCTCCACAGATAAAGGAGGCC...TATGTAGTGCCCCCAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp AAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCGTCCCTTCCTCCGCATaGTCCTTGAAAACTGATGCT +
Preference number: 4 (lower is better)
Translates to: KAKRQPEYGSIYKLMGSSVPSSA*SLKTDA
Trigger: AGCATCAGTTTTCAAGGACCATGCGGAGGAAGGGAC...GCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TGGAAGTTAAAGAAAATGCCCCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTGTCTTTTCTGCTCCTTaGCTTGCTGCCGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: WKLKKMPLGRQRGSQSMAVFSAP*LAAALM
Trigger: CATCAAGGCGGCAGCAAGCCAAGGAGCAGAAAAGAC...AGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGGGGCATTTTCTTTAACTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CCAGCTGACTGCTGCCCATTAGCTCAAAAATCCCAATACTGGGGGCACTACATAAGTTCTGATGGCCACTaGAGGGCAGTGCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: PADCCPLAQKSQYWGHYISSDGH*RAVLSS
Trigger: AGATGAAAGCACTGCCCTCCAGTGGCCATCAGAACT...TATGTAGTGCCCCCAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp AGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGTCCCTTGTTTCCTCCCACCATaGTCTTGGGAGCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: SPWSELFSSGFVPSSEVPCFLPP*SWELLP
Trigger: TGGTAGCAGCTCCCAAGACCATGGTGGGAGGAAACA...AGGGACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATGTTTTGATCGGTGTTTaGAGCTGGCATAGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QGVLVWVLVQNLLGLMTYVLIGV*SWHSLS
Trigger: ACTCAGACTATGCCAGCTCCAAACACCGATCAAAAC...ATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATACTGTATTCTGGGAAGGGCTCCTaGTGCTGCGGCTGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: YGSIYKLMGSSTKMLILYSGKGS*CCGCGP
Trigger: GGGACCGCAGCCGCAGCACCAGGAGCCCTTCCCAGA...ATACAGTATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp AAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCGAGCTTCCCTATCAGTaGAAGGACAGGCTTATTGCC +
Preference number: 4 (lower is better)
Translates to: KAKRQPEYGSIYKLMGSSELPYQ*KDRLIA
Trigger: GGCAATAAGCCTGTCCTTCCACTGATAGGGAAGCTC...GCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TTTACTCTTTTGAGAATTTGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTGTTATGGGAGATGGTTaGGTCCCCAGGGTAGCAGTC +
Preference number: 4 (lower is better)
Translates to: FTLLRICEGRNRALAQVSVMGDG*VPRVAV
Trigger: GACTGCTACCCTGGGGACCCAACCATCTCCCATAAC...ACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCGTGAAGGGCCCAGGATaGATGGCTGAGGCGGGAATG +
Preference number: 4 (lower is better)
Translates to: LLSKLSWAEGMETMKQNIVKGPG*MAEAGM
Trigger: CATTCCCGCCTCAGCCATCCATCCTGGGCCCTTCAC...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp ACATGGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTGTAGAGGGCAGCATGTaGGACAGGGTGAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: TWDHFQVHIQLVFFALPTVEGSM*DRVKGE
Trigger: TTCACCTTTCACCCTGTCCCACATGCTGCCCTCTAC...AGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCGTAGAGGGCAGCATGTaGGACAGGGTGAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LLAGINGSTPPREHLWVSVEGSM*DRVKGE
Trigger: TTCACCTTTCACCCTGTCCCACATGCTGCCCTCTAC...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CCA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTATGGGTCTCCTCCCCTaGCCCTACCTAGGATCCCAT +
Preference number: 4 (lower is better)
Translates to: LGPRSESAGADDLFFFRFMGLLP*PYLGSH
Trigger: ATGGGATCCTAGGTAGGGCCAGGGGAGGAGACCCAT...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CACCTTTGGGTCAGTGTGTTAATTAGGGCTGAGAGCCTGGGTGAAAGGCAAGAAAATGGACTGACTGCCTaGAACAAGGTACCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: HLWVSVLIRAESLGERQENGLTA*NKVPRE
Trigger: TTCCCTGGGTACCTTGTTCCAGGCAGTCAGTCCATT...TTCTTGCCTTTCACCCAGGCTCTCAGCCCTAATTAACACACTGACCCAAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp AGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGAATAAAAGTTGGCTCTaGGGTCTTCCAAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SLFSLLCQLMEPPKGFFLNKSWL*GLPRLW
Trigger: CCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATT...CAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR TCA 90 bp ATCACACAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATGCTACAGGCAGACCCTaGAGCAGGTGCGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: ITQFTIKVGSEVFQGFGNATGRP*SRCVHS
Trigger: AGAATGGACGCACCTGCTTCAGGGTCTGCCTGTAGC...ATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCGCTACAGGCAGACCCTaGAGCAGGTGCGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: LLSKLSWAEGMETMKQNIATGRP*SRCVHS
Trigger: AGAATGGACGCACCTGCTTCAGGGTCTGCCTGTAGC...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp AAACAGCAAAAGTACATGAGGGAGACTGTTAAAGATGAGCATCCCTCAGAAGCCCGCTGGGAGTCATCTTaGGCTCTCCGCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KQQKYMRETVKDEHPSEARWESS*ALRLLL
Trigger: AAGAAGAAGGCGGAGAGCTCAAGATGACTCCCAGCG...GGCTTCTGAGGGATGCTCATCTTTAACAGTCTCCCTCATGTACTTTTGCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCATATTTGTGCCGTTTTaGTCGGTGTTTGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSIFVPF*SVFGAG
Trigger: GCCAGCTCCAAACACCGATCAAAACGGCACAAATAT...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR TCA 90 bp GCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTTCCTCTGAAGGGAACTaGTGCCCAAATAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: ATHAHDIILDNDWNGICSSSEGN*CPNRAS
Trigger: TGATGCCCTATTTGGGCATCAGTTCCCTTCAGAGGA...AGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp AAACAGCAAAAGTACATGAGGGAGACTGTTAAAGATGAGCATCCCTCAGAAGCCAGTGGAGCCACAGGGTaGTCAGCAGTAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KQQKYMRETVKDEHPSEASGATG*SAVASP
Trigger: TGGAGAAGCTACTGCTGATCACCCTGTGGCTCCACT...GGCTTCTGAGGGATGCTCATCTTTAACAGTCTCCCTCATGTACTTTTGCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTTGTAGGATGGCATGCTaGACAGTTGTGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVCRMAC*TVVMEV
Trigger: CACCTCCATCACAACTGTTCAGCATGCCATCCTACA...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TGGAAGTTAAAGAAAATGCCCCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTTGTAGGATGGCATGCTaGACAGTTGTGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WKLKKMPLGRQRGSQSMACRMAC*TVVMEV
Trigger: CACCTCCATCACAACTGTTCAGCATGCCATCCTACA...AGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGGGGCATTTTCTTTAACTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCGATGGAATTGCAGCCTaGGTTATATCAGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSDGIAA*VISGSR
Trigger: CCTGGAACCTGATATAACTCAGGCTGCAATTCCATC...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp CACCTTTGGGTCAGTGTGTTAATTAGGGCTGAGAGCCTGGGTGAAAGGCAAGAATTCACTTTAGACACATaGGCTCCTCTCTGGGCCATA +
Preference number: 4 (lower is better)
Translates to: HLWVSVLIRAESLGERQEFTLDT*APLWAI
Trigger: TATGGCCCAGAGAGGAGCTCATGTGTCTAAAGTGAA...TTCTTGCCTTTCACCCAGGCTCTCAGCCCTAATTAACACACTGACCCAAAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp ACATGGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTGGATCTGTTCTCCCCTaGAGAGATTTTCCCAATCCC +
Preference number: 4 (lower is better)
Translates to: TWDHFQVHIQLVFFALPTGSVLP*RDFPNP
Trigger: GGGATTGGGAAAATCTCTTCAGGGGAGAACAGATCC...AGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR GCA 90 bp CCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCCGGGACCACTTCCAGGTaGACATTCAGCTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PMPMTSYLTTIGMGSVLPGTTSR*TFSLFS
Trigger: AGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCC...GGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR GCA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTACTAACTGTCTTTTCTaGTCCTTGGCTTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVTNCLF*SLACCR
Trigger: GCGGCAGCAAGCCAAGGAGCAGAAAAGACAGTTAGT...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCTGGTTTCCTTCGGCTaGTCAGAGACTTCACTAACT +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSLVSFG*SETSLT
Trigger: AGTTAGTGAAGTCTCTGAGCAGCCGAAGGAAACCAG...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR GCA 90 bp ATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACTTGGCTTTCTTTCCCTaGTGGGGTGGCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: IIKLHFHATHAHDIILDNLAFFP*WGGQRG
Trigger: ACCTCTCTGGCCACCCCAGCAGGGAAAGAAAGCCAA...GTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCCTCCGCCCACTTCCTTaGTTTTATTTGGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: LLAGINGSTPPREHLWVSLRPLP*FYLAHQ
Trigger: CTGGTGAGCCAAATAAAAGCAAGGAAGTGGGCGGAG...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR GCA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATCAGATCGTTCTTTCTTaGTGGGAAGGCTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDQIVLS*WEGFSL
Trigger: CAGGGAGAAGCCTTCCCAGCAAGAAAGAACGATCTG...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp AAACAGCAAAAGTACATGAGGGAGACTGTTAAAGATGAGCATCCCTCAGAAGCCTGGGAGCGCTTGGAGTaGCTTCGTGATCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: KQQKYMRETVKDEHPSEAWERLE*LRDLSL
Trigger: CAGTGACAGATCACGAAGGCACTCCAAGCGCTCCCA...GGCTTCTGAGGGATGCTCATCTTTAACAGTCTCCCTCATGTACTTTTGCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCTTGTCTTCAGGACTaGAGTCACCTTCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: LLAGINGSTPPREHLWVSSCLQD*SHLLTL
Trigger: GAGGGTCAGAAGGTGACTGCAGTCCTGAAGACAAGA...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR GCA 90 bp TACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCGGAAAGGCCTTTACTTaGTTGGCCAGAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: YLLQSLVRTLLIGFCSIFGKAFT*LARSCC
Trigger: GCAGCAGCTTCTGGCCAAGCAAGTAAAGGCCTTTCC...GAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TTTACTCTTTTGAGAATTTGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTACAGTTTGGAGATGTTaGTGCAGAGGGGTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: FTLLRICEGRNRALAQVSTVWRC*CRGVGS
Trigger: GCTACCCACCCCTCTGCAGCAACATCTCCAAACTGT...ACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TCTGTTCTCCCACTGCTAAGATTACCATCACCACAACAAGTCCAGGATCATAATAGCGGTCCGCCATTTTaGCGCCTTCACTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SVLPLLRLPSPQQVQDHNSGPPF*RLHSSQ
Trigger: CTGAGAGGAGTGAAGGCGGCAAAATGGCGGACCGCT...ATTATGATCCTGGACTTGTTGTGGTGATGGTAATCTTAGCAGTGGGAGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586037.5
ENST00000592746.5
CDS-3UTR CCA 90 bp CCAGCTGACTGCTGCCCATTAGCTCAAAAATCCCAATACTGGGGGCACTACATATACAGCCACTGTGGTTaGTTTGAACATGGGACCACT +
Preference number: 4 (lower is better)
Translates to: PADCCPLAQKSQYWGHYIYSHCG*FEHGTT
Trigger: AGTGGTCCCATGTTCAAACCAACCACAGTGGCTGTA...TATGTAGTGCCCCCAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCGTCCCTTCCTCCGCATaGTCCTTGAAAACTGATGCT +
Preference number: 4 (lower is better)
Translates to: LLAGINGSTPPREHLWVSVPSSA*SLKTDA
Trigger: AGCATCAGTTTTCAAGGACCATGCGGAGGAAGGGAC...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CCA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCTAGGCCTTGGAGATaGTCCTTTGAGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLAGINGSTPPREHLWVSSRPWR*SFEELP
Trigger: AGGAAGCTCCTCAAAGGACCATCTCCAAGGCCTAGA...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CCA 90 bp CCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCCATCGTTCTTTCTTGCTaGGAAGGCTTCTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PMPMTSYLTTIGMGSVLPIVLSC*EGFSLC
Trigger: ACACAGGGAGAAGCCTTCCCAGCAAGAAAGAACGAT...GGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TTCAGCATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGGTAGTTATGGGAGATaGTTGGGTCCCCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: FSIIKLHFHATHAHDIILGSYGR*LGPQGS
Trigger: GCTACCCTGGGGACCCAACCATCTCCCATAACTACC...AAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTATGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CACCTTTGGGTCAGTGTGTTAATTAGGGCTGAGAGCCTGGGTGAAAGGCAAGAAGAAATGCTCAAGGTCTaGTGCTATAGGCAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: HLWVSVLIRAESLGERQEEMLKV*CYRQQA
Trigger: AGCTTGCTGCCTATAGCACCAGACCTTGAGCATTTC...TTCTTGCCTTTCACCCAGGCTCTCAGCCCTAATTAACACACTGACCCAAAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TGGAAGTTAAAGAAAATGCCCCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTGTGGCTCCGTTGATGTaGGAACTGGATGGAATTGCA +
Preference number: 4 (lower is better)
Translates to: WKLKKMPLGRQRGSQSMAVAPLM*ELDGIA
Trigger: TGCAATTCCATCCAGTTCCCACATCAACGGAGCCAC...AGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGGGGCATTTTCTTTAACTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp AAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCTGGAGATGCCTCTTCTaGGATGAGGGATACCAAGAT +
Preference number: 4 (lower is better)
Translates to: KAKRQPEYGSIYKLMGSSWRCLF*DEGYQD
Trigger: ATCTTGGTATCCCTCATCCCAGAAGAGGCATCTCCA...GCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR CAA 72 bp TCCACTTTCCTTGACTGGATCTTCTCCAGTAGCAGTTaGGCAGTGACAGAGTTCTTGTCTTCAGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: STFLDWIFSSSS*AVTEFLSSGLQ
Trigger: CTGCAGTCCTGAAGACAAGAACTCTGTCACTGCCAAACTGCTACTGGAGAAGATCCAGTCAAGGAAAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 72 bp TCCATTTCCATGCGACCCATGCCCATGACATCATACTaGACAACGATTGGAATGGGATCTGTTCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: SISMRPMPMTSY*TTIGMGSVLPL
Trigger: CAGTGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592746.5
CDS-3UTR TCA 90 bp CCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAAATAAAAGTTGGCTCTaGGGTCTTCCAAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PRKAKRQPEYGSIYKLMGNKSWL*GLPRLW
Trigger: CCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATT...TCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAACCACTGTGGTTGGTTTaGACATGGGACCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKPLWLV*TWDHFQ
Trigger: CTGGAAGTGGTCCCATGTTCAAACCAACCACAGTGG...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp TTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCACACATTTGGGTCTCTaGAACCTTCTGACTATGACT +
Preference number: 4 (lower is better)
Translates to: FQVHIQLVFFALPTHGAATHLGL*NLLTMT
Trigger: AGTCATAGTCAGAAGGTTTCAGAGACCCAAATGTGT...GGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TGCCTCTTCTGGGATGAGGGATACCAAGATAACAGTGCCAAATGTGTGGCTCCGACACATTTGGGTCTCTaGAACCTTCTGACTATGACT +
Preference number: 4 (lower is better)
Translates to: CLFWDEGYQDNSAKCVAPTHLGL*NLLTMT
Trigger: AGTCATAGTCAGAAGGTTTCAGAGACCCAAATGTGT...CGGAGCCACACATTTGGCACTGTTATCTTGGTATCCCTCATCCCAGAAGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp CCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCCAGGGTTACAACTGTATaGAATGGAGGGTTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PMPMTSYLTTIGMGSVLPRVTTV*NGGFCL
Trigger: AAGGCAGAACCCTCCATTTCATACAGTTGTAACCCT...GGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp ACGGCGCCGTTCGGTAGCATCTTCAGCATAATCAAGCTCCATTTCCATGCGACCCGAGCAAACTCTCTCTaGTTCAGATCTTTTAATCTC +
Preference number: 4 (lower is better)
Translates to: TAPFGSIFSIIKLHFHATRANSL*FRSFNL
Trigger: GAGATTAAAAGATCTGAAGCAGAGAGAGTTTGCTCG...GGTCGCATGGAAATGGAGCTTGATTATGCTGAAGATGCTACCGAACGGCGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR GCA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATGGGACCACTTCCAGGTaGACATTCAGCTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDGTTSR*TFSLFS
Trigger: AGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCC...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TGGGATAACGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGTGCTCCTTGGCTTGCTaGCGCCTTGATGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: WDNVTSPKMVKDTTPKWWCSLAC*RLDAAF
Trigger: AAAAGCTGCATCAAGGCGGCAGCAAGCCAAGGAGCA...CCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACGTTATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCCTGGTTTCCTTCGGCTaGTCAGAGACTTCACTAACT +
Preference number: 4 (lower is better)
Translates to: FHATHAHDIILDNDWNGILVSFG*SETSLT
Trigger: AGTTAGTGAAGTCTCTGAGCAGCCGAAGGAAACCAG...GATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATTGCCTTCAGGTGCGTCCATTCTaGCTCCTGAGGAACGTACTA +
Preference number: 4 (lower is better)
Translates to: QFTIKVGSEVFQGFGNCLQVRPF*LLRNVL
Trigger: TAGTACGTTCCTCAGGAGGCAGAATGGACGCACCTG...AAGGCAATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATACTGTATGGCCTGGCTGACTGCTaGTATCCAGGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: YGSIYKLMGSSTKMLILYGLADC*YPGTPG
Trigger: CCCTGGAGTCCCTGGATAGCAGCAGTCAGCCAGGCC...ATACAGTATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAAACTCTTTTGAGAATTTaGGAAGGCAGGAACAGAGCC +
Preference number: 4 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQTLLRI*EGRNRA
Trigger: GGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGT...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp AGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGATACTTGACAACGATTaGAATGGGATCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SLFSLLCQLMEPPKGFFLILDND*NGICSP
Trigger: GGGAGAACAGATCCCATTCCAATCGTTGTCAAGTAT...CAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CCA 90 bp CATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCCTGTACAGCCACTGTGGTTaGTTTGAACATGGGACCACT +
Preference number: 4 (lower is better)
Translates to: HAHDIILDNDWNGICSPLYSHCG*FEHGTT
Trigger: AGTGGTCCCATGTTCAAACCAACCACAGTGGCTGTA...CAGGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CCA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTACCTTCTGCAGTCCTTaGTCAGAACTCTTCTCATCG +
Preference number: 4 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVTFCSP*SELFSS
Trigger: CGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGT...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TTCAGCATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGTCTTTTCTGCTCCTTaGCTTGCTGCCGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: FSIIKLHFHATHAHDIILVFSAP*LAAALM
Trigger: CATCAAGGCGGCAGCAAGCCAAGGAGCAGAAAAGAC...AAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTATGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCATCTTTGCTCAAAACTaGGAAGAAGGGACCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSIFAQN*EEGTSR
Trigger: CCTACTGGTCCCTTCTTCCCAGTTTTGAGCAAAGAT...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CCA 90 bp TTCAGCATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTCAGGGGGTTCTGGTTTaGGTCCTCGTTCAGAATCTG +
Preference number: 4 (lower is better)
Translates to: FSIIKLHFHATHAHDIILQGVLV*VLVQNL
Trigger: CAGATTCTGAACGAGGACCCAAACCAGAACCCCCTG...AAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTATGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp AAACAGCAAAAGTACATGAGGGAGACTGTTAAAGATGAGCATCCCTCAGAAGCCCAGGGGGTTCTGGTTTaGGTCCTCGTTCAGAATCTG +
Preference number: 4 (lower is better)
Translates to: KQQKYMRETVKDEHPSEAQGVLV*VLVQNL
Trigger: CAGATTCTGAACGAGGACCCAAACCAGAACCCCCTG...GGCTTCTGAGGGATGCTCATCTTTAACAGTCTCCCTCATGTACTTTTGCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTAGTCATGGGAGCGCTTaGAGTGCCTTCGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: LGPRSESAGADDLFFFRFSHGSA*SAFVIC
Trigger: ACAGATCACGAAGGCACTCCAAGCGCTCCCATGACT...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTATCTTGAGCGCTCTCTaGTATGACTCCGAGATCGGC +
Preference number: 4 (lower is better)
Translates to: LGPRSESAGADDLFFFRFILSAL*YDSEIG
Trigger: GCCGATCTCGGAGTCATACCAGAGAGCGCTCAAGAT...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCTCCACTTTCCTTGACTaGATCTTCTCCAGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: LAGINGSTPPREHLWVSSSTFLD*IFSSSS
Trigger: ACTGCTACTGGAGAAGATCCAGTCAAGGAAAGTGGA...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CCA 90 bp TTCAGCATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTAGGCCTTTACTTGCTTaGCCAGAAGCTGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: FSIIKLHFHATHAHDIILRPLLA*PEAAAG
Trigger: TCCAGCAGCAGCTTCTGGCCAAGCAAGTAAAGGCCT...AAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTATGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp AAACAGCAAAAGTACATGAGGGAGACTGTTAAAGATGAGCATCCCTCAGAAGCCGTTGCTGCAGAGGGGTaGGTAGCACTTACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KQQKYMRETVKDEHPSEAVAAEG*VALTGV
Trigger: AACACCAGTAAGTGCTACCCACCCCTCTGCAGCAAC...GGCTTCTGAGGGATGCTCATCTTTAACAGTCTCCCTCATGTACTTTTGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAAGAGGCAGCCAGAGTATaGCTCAATCTACAAGCTAAT +
Preference number: 4 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQEAARV*LNLQAN
Trigger: ATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTC...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTATCCTTGCGGGATCTTaGAGAGACATTTCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVILAGS*RDISSK
Trigger: TTTGCTCGAAATGTCTCTTCAAGATCCCGCAAGGAT...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp GCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTATCCTTGCGGGATCTTaGAGAGACATTTCGAGCAAA +
Preference number: 4 (lower is better)
Translates to: ATHAHDIILDNDWNGICSILAGS*RDISSK
Trigger: TTTGCTCGAAATGTCTCTTCAAGATCCCGCAAGGAT...AGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR TCA 90 bp CATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCCTGCCTCCGCATGGTCCTTaGAAACTGATGCTATTGATT +
Preference number: 4 (lower is better)
Translates to: HAHDIILDNDWNGICSPLPPHGP*KLMLLI
Trigger: AATCAATAGCATCAGTTTTCAAGGACCATGCGGAGG...CAGGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp AAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGCTTAGATTTCTCCCCTaGCTCTGCCTTAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KLHFHATHAHDIILDNDWLRFLP*LCLRAF
Trigger: AAAAGCTCTAAGGCAGAGTCAGGGGAGAAATCTAAG...CCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATCTTAGATTTCTCCCCTaGCTCTGCCTTAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDLRFLP*LCLRAF
Trigger: AAAAGCTCTAAGGCAGAGTCAGGGGAGAAATCTAAG...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAATCTTCGCTGGCAGGATaGAGGTGGAAGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKSSLAG*RWKFTF
Trigger: AAAGGTGAACTTCCACCTTCATCCTGCCAGCGAAGA...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCAGTAGCAGTTTGGCAGTaGCAGAGTTCTTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPVAVWQ*QSSCLQ
Trigger: CTGAAGACAAGAACTCTGTCACTGCCAAACTGCTAC...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCCAAGGCTTTGGCAATTaGCTTCTCTTTGTCAACATA +
Preference number: 4 (lower is better)
Translates to: SACFLCSANSWSRRRAFSQGFGN*LLFVNI
Trigger: TATGTTGACAAAGAGAAGGCAATTGCCAAAGCCTTG...GGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR GCA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTTTGTTTTCTTTGCTCTaGCAACTCATGGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LGPRSESAGADDLFFFRFLFSLL*QLMEPP
Trigger: CGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAA...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TTCAGCATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTTTGTTTTCTTTGCTCTaGCAACTCATGGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: FSIIKLHFHATHAHDIILLFSLL*QLMEPP
Trigger: CGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAA...AAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTATGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR GCA 90 bp TTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTCAGCTTGTTTTCTTTaGTCTGCCAACTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: FHATHAHDIILDNDWNGISACFL*SANSWS
Trigger: GCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGA...GATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR GCA 90 bp ACATGGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTTCAGCTTGTTTTCTTTaGTCTGCCAACTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: TWDHFQVHIQLVFFALPTSACFL*SANSWS
Trigger: GCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGA...AGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR GCA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAACAGTGCTTTCATCTTTaGTCAAAACTGGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGEQCFHL*SKLGRR
Trigger: CCTTCTTCCCAGTTTTGAGCAAAGATGAAAGCACTG...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTCATCAGAGTAACTaGGCTGTCTACTATAGCAGC +
Preference number: 4 (lower is better)
Translates to: FHATHAHDIILDNDWNGICHQSN*AVYYSS
Trigger: GCTGCTATAGTAGACAGCGCAGTTACTCTGATGACA...GATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TGGAAGTTAAAGAAAATGCCCCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTGGAACTGGATGGAATTaGAGCCTGAGTTATATCAGG +
Preference number: 4 (lower is better)
Translates to: WKLKKMPLGRQRGSQSMAGTGWN*SLSYIR
Trigger: CCTGATATAACTCAGGCTGCAATTCCATCCAGTTCC...AGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGGGGCATTTTCTTTAACTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACAAAGCCCCCAGCTGACTaGTGCCCATTAGCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTKPPAD*CPLAQK
Trigger: TTTTTGAGCTAATGGGCAGCAGTCAGCTGGGGGCTT...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTTACTTTGCAGTGTGCTaGGGGGATGTAGTGGTAATA +
Preference number: 4 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVYFAVC*GDVVVI
Trigger: TATTACCACTACATCCCCCCAGCACACTGCAAAGTA...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCCTCTGGGGCATTCTTTaGGTGTGTAGTATTATCACC +
Preference number: 4 (lower is better)
Translates to: LLAGINGSTPPREHLWVSLWGIL*VCSIIT
Trigger: GGTGATAATACTACACACCCAAAGAATGCCCCAGAG...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CCA 90 bp CAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATTGCCTTAGTTCTGATGGCCACTaGAGGGCAGTGCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: QFTIKVGSEVFQGFGNCLSSDGH*RAVLSS
Trigger: AGATGAAAGCACTGCCCTCCAGTGGCCATCAGAACT...AAGGCAATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCAATCGTTCTTTCTTGCTaGGAAGGCTTCTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPIVLSC*EGFSLC
Trigger: ACACAGGGAGAAGCCTTCCCAGCAAGAAAGAACGAT...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATAACTCCCAGGGGGTTCTaGTTTGGGTCCTCGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLITPRGF*FGSSFR
Trigger: TCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGT...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TCTCTTTGTCAACATAATCCTTGTACTTTTGTCTCAGCTCTTCTGTGTCTTCTTCTGGAGCCTGATCTCTaGGAAGGGCTCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLCQHNPCTFVSALLCLLLEPDL*EGLLVL
Trigger: CAGCACCAGGAGCCCTTCCCAGAGATCAGGCTCCAG...AAGAAGACACAGAAGAGCTGAGACAAAAGTACAAGGATTATGTTGACAAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTGCTGTTCTGGGAAGGTaGACCTGTTGCTTTACTGTC +
Preference number: 4 (lower is better)
Translates to: LGPRSESAGADDLFFFRFAVLGR*TCCFTV
Trigger: GACAGTAAAGCAACAGGTCCACCTTCCCAGAACAGC...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TGGGATAACGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGGCTGTTCTGGGAAGGTaGACCTGTTGCTTTACTGTC +
Preference number: 4 (lower is better)
Translates to: WDNVTSPKMVKDTTPKWWAVLGR*TCCFTV
Trigger: GACAGTAAAGCAACAGGTCCACCTTCCCAGAACAGC...CCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACGTTATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACAATGATGTGGATGGGATaGCTAGCGAGAAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTMMWMG*LARKVA
Trigger: TGCCACCTTTCTCGCTAGCCATCCCATCCACATCAT...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp AAACAGCAAAAGTACATGAGGGAGACTGTTAAAGATGAGCATCCCTCAGAAGCCGCTTTCCACCTCACCTaGGATAACGTAACGTCACCA +
Preference number: 4 (lower is better)
Translates to: KQQKYMRETVKDEHPSEAAFHLT*DNVTSP
Trigger: TGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGC...GGCTTCTGAGGGATGCTCATCTTTAACAGTCTCCCTCATGTACTTTTGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CCAGCTGACTGCTGCCCATTAGCTCAAAAATCCCAATACTGGGGGCACTACATACAACACAAGCACCTTTaGGTCAGTGTGTTAATTAGG +
Preference number: 4 (lower is better)
Translates to: PADCCPLAQKSQYWGHYIQHKHL*VSVLIR
Trigger: CCTAATTAACACACTGACCCAAAGGTGCTTGTGTTG...TATGTAGTGCCCCCAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAACCTCATCAAAGGAGATaGGACCTGCAACACAAGCAC +
Preference number: 4 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKPHQRR*DLQHKH
Trigger: GTGCTTGTGTTGCAGGTCCCATCTCCTTTGATGAGG...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
3UTR CAA 72 bp GTTCCATCTTCAGAGGTCCCTTCCTCCGCATGGTCCTaGAAAACTGATGCTATTGATTCGAGTTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: VPSSEVPSSAWS*KTDAIDSSLTG
Trigger: TCCTGTCAAACTCGAATCAATAGCATCAGTTTTCAAGGACCATGCGGAGGAAGGGACCTCTGAAGATGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 72 bp TTGGCTCACCAGGATCTAGGCCTTGGAGATGGTCCTTaGAGGAGCTTCCTATATCCTTTGGTTTTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LAHQDLGLGDGP*RSFLYPLVFLF
Trigger: GAACAGAAAAACCAAAGGATATAGGAAGCTCCTCAAAGGACCATCTCCAAGGCCTAGATCCTGGTGAGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCCTATTGATTCGAGTTTaGCAGGAGCCTTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: FHATHAHDIILDNDWNGILLIRV*QEPFWQ
Trigger: TTGCCAAAAAGGCTCCTGTCAAACTCGAATCAATAG...GATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp TTTACTCTTTTGAGAATTTGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTCCTCCGCATGGTCCTTaGAAACTGATGCTATTGATT +
Preference number: 4 (lower is better)
Translates to: FTLLRICEGRNRALAQVSPPHGP*KLMLLI
Trigger: AATCAATAGCATCAGTTTTCAAGGACCATGCGGAGG...ACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATACTCAGCCCCATCTGTTaGCTCAATACTAGGATCCCC +
Preference number: 4 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLILSPIC*LNTRIP
Trigger: GGGGATCCTAGTATTGAGTCAACAGATGGGGCTGAG...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCAGTGCTTTCATCTTTaGTCAAAACTGGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVQCFHL*SKLGRR
Trigger: CCTTCTTCCCAGTTTTGAGCAAAGATGAAAGCACTG...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATTGCCTTTGCGGGAATGCTCACTaGCTGAATCTTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QFTIKVGSEVFQGFGNCLCGNAH*LNLPLL
Trigger: AAGAAGAGGAAGATTCAGGCAGTGAGCATTCCCGCA...AAGGCAATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TTTACTCTTTTGAGAATTTGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTTGTCATCAGAGTAACTaGGCTGTCTACTATAGCAGC +
Preference number: 4 (lower is better)
Translates to: FTLLRICEGRNRALAQVSCHQSN*AVYYSS
Trigger: GCTGCTATAGTAGACAGCGCAGTTACTCTGATGACA...ACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp GCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTATACTTGACAACGATTaGAATGGGATCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ATHAHDIILDNDWNGICSILDND*NGICSP
Trigger: GGGAGAACAGATCCCATTCCAATCGTTGTCAAGTAT...AGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587228.5
ENST00000590041.5
ENST00000592746.5
CDS-3UTR CCA 90 bp ATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACTACAGCCACTGTGGTTaGTTTGAACATGGGACCACT +
Preference number: 4 (lower is better)
Translates to: IIKLHFHATHAHDIILDNYSHCG*FEHGTT
Trigger: AGTGGTCCCATGTTCAAACCAACCACAGTGGCTGTA...GTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CCA 90 bp AAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCTCCCAATTTTTGCAATaGGGTCCCCAGATTATTCTT +
Preference number: 4 (lower is better)
Translates to: KAKRQPEYGSIYKLMGSSSQFLQ*GPQIIL
Trigger: AAGAATAATCTGGGGACCCCATTGCAAAAATTGGGA...GCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACAACCTTCTGCAGTCCTTaGTCAGAACTCTTCTCATCG +
Preference number: 4 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTTFCSP*SELFSS
Trigger: CGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGT...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCATACTTTGCAGTGTGCTaGGGGGATGTAGTGGTAATA +
Preference number: 4 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPYFAVC*GDVVVI
Trigger: TATTACCACTACATCCCCCCAGCACACTGCAAAGTA...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp ATCACACAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATTCTAGGCCTTGGAGATaGTCCTTTGAGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ITQFTIKVGSEVFQGFGNSRPWR*SFEELP
Trigger: AGGAAGCTCCTCAAAGGACCATCTCCAAGGCCTAGA...ATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTGTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TCTCTTTGTCAACATAATCCTTGTACTTTTGTCTCAGCTCTTCTGTGTCTTCTTGGGTGTCCCCATCACTaGGGTCGGGGAGGTAGTTAT +
Preference number: 4 (lower is better)
Translates to: SLCQHNPCTFVSALLCLLGCPHH*GRGGSY
Trigger: ATAACTACCTCCCCGACCCCAGTGATGGGGACACCC...AAGAAGACACAGAAGAGCTGAGACAAAAGTACAAGGATTATGTTGACAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp CAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATTGCCTTGAAATGCTCAAGGTCTaGTGCTATAGGCAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: QFTIKVGSEVFQGFGNCLEMLKV*CYRQQA
Trigger: AGCTTGCTGCCTATAGCACCAGACCTTGAGCATTTC...AAGGCAATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CCA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCTGGGAGGTGCATAACTaGGGAAATGCTCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLSKLSWAEGMETMKQNIWEVHN*GNAQGL
Trigger: CAGACCTTGAGCATTTCCCCAGTTATGCACCTCCCA...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TCTCTTTGTCAACATAATCCTTGTACTTTTGTCTCAGCTCTTCTGTGTCTTCTTGCTGCTGAATGTGGATaGGTTGCAGGGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SLCQHNPCTFVSALLCLLAAECG*VAGLVW
Trigger: CCACACCAGCCCTGCAACCCATCCACATTCAGCAGC...AAGAAGACACAGAAGAGCTGAGACAAAAGTACAAGGATTATGTTGACAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp ATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACTTGGAGATGGTCCTTTaGGGAGCTTCCTATATCCTT +
Preference number: 4 (lower is better)
Translates to: IIKLHFHATHAHDIILDNLEMVL*GASYIL
Trigger: AAGGATATAGGAAGCTCCTCAAAGGACCATCTCCAA...GTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACATTGGAGATGGTCCTTTaGGGAGCTTCCTATATCCTT +
Preference number: 4 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTLEMVL*GASYIL
Trigger: AAGGATATAGGAAGCTCCTCAAAGGACCATCTCCAA...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp TCTCTTTGTCAACATAATCCTTGTACTTTTGTCTCAGCTCTTCTGTGTCTTCTTCTGGTGCAGCCGGTGTaGGGAAGCATCATCACTATC +
Preference number: 4 (lower is better)
Translates to: SLCQHNPCTFVSALLCLLLVQPV*GSIITI
Trigger: GATAGTGATGATGCTTCCTCACACCGGCTGCACCAG...AAGAAGACACAGAAGAGCTGAGACAAAAGTACAAGGATTATGTTGACAAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR TCA 90 bp ATCACACAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATATATTTGTGCCGTTTTaGTCGGTGTTTGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ITQFTIKVGSEVFQGFGNIFVPF*SVFGAG
Trigger: GCCAGCTCCAAACACCGATCAAAACGGCACAAATAT...ATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTGTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATATTGTTTTCTTTGCTCTaGCAACTCATGGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLILFSLL*QLMEPP
Trigger: CGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAA...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACATCAGCTTGTTTTCTTTaGTCTGCCAACTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTSACFL*SANSWS
Trigger: GCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGA...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACATACTGTCATCTCCTCTaGCATCATCTTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTYCHLL*HHLSSQ
Trigger: CTGGGAAGAAAGATGATGGCAGAGGAGATGACAGTA...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TGGAATGGGATCTGTTCTCCCACTGCTAAGATTACCATCACCACAACAAGTCCAATACTTGACAACGATTaGAATGGGATCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: WNGICSPTAKITITTTSPILDND*NGICSP
Trigger: GGGAGAACAGATCCCATTCCAATCGTTGTCAAGTAT...TGGACTTGTTGTGGTGATGGTAATCTTAGCAGTGGGAGAACAGATCCCATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586037.5
ENST00000592746.5
CDS-3UTR CCA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACACTCTGGGGCATTCTTTaGGTGTGTAGTATTATCACC +
Preference number: 4 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTLWGIL*VCSIIT
Trigger: GGTGATAATACTACACACCCAAAGAATGCCCCAGAG...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAAGTTTTGATCGGTGTTTaGAGCTGGCATAGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKVLIGV*SWHSLS
Trigger: ACTCAGACTATGCCAGCTCCAAACACCGATCAAAAC...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTTCCACTTTCCTTGACTaGATCTTCTCCAGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: LGPRSESAGADDLFFFRFSTFLD*IFSSSS
Trigger: ACTGCTACTGGAGAAGATCCAGTCAAGGAAAGTGGA...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
3UTR CAA 72 bp GCCACACGAATAGTTAGGAAAATGCCAAAGTGGGAATaGTTAACCTCATCAAAGGAGATGGGACCTGCAACA +
Preference number: 4 (lower is better)
Translates to: ATRIVRKMPKWE*LTSSKEMGPAT
Trigger: TGTTGCAGGTCCCATCTCCTTTGATGAGGTTAACAATTCCCACTTTGGCATTTTCCTAACTATTCGTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp ATCACACAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATAATAAAAGTTGGCTCTaGGGTCTTCCAAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ITQFTIKVGSEVFQGFGNNKSWL*GLPRLW
Trigger: CCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATT...ATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTGTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR TCA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCAGGGTTACAACTGTATaGAATGGAGGGTTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LLSKLSWAEGMETMKQNIRVTTV*NGGFCL
Trigger: AAGGCAGAACCCTCCATTTCATACAGTTGTAACCCT...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp CAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATTGCCTTTACCATCAAGATTACTaGTCCCATCAGAGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: QFTIKVGSEVFQGFGNCLYHQDY*SHQSLL
Trigger: TAGGAGACTCTGATGGGAGCAGTAATCTTGATGGTA...AAGGCAATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACATACCATCAAGATTACTaGTCCCATCAGAGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTYHQDY*SHQSLL
Trigger: TAGGAGACTCTGATGGGAGCAGTAATCTTGATGGTA...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATATGCGGGAATGCTCACTaGCTGAATCTTCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLICGNAH*LNLPLL
Trigger: AAGAAGAGGAAGATTCAGGCAGTGAGCATTCCCGCA...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATACTGTATGGAAAGGCCTTTACTTaGTTGGCCAGAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: YGSIYKLMGSSTKMLILYGKAFT*LARSCC
Trigger: GCAGCAGCTTCTGGCCAAGCAAGTAAAGGCCTTTCC...ATACAGTATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATTGCCTTATACTTGACAACGATTaGAATGGGATCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QFTIKVGSEVFQGFGNCLILDND*NGICSP
Trigger: GGGAGAACAGATCCCATTCCAATCGTTGTCAAGTAT...AAGGCAATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CCA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATATTCTTTTTGTGCCGGTaGGACTTCCCAGATCGTTCT +
Preference number: 4 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLIFFLCR*DFPDRS
Trigger: AGAACGATCTGGGAAGTCCCACCGGCACAAAAAGAA...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATACTGTATCCCATGATCTCTTCCTaGAGCCTGATCTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: YGSIYKLMGSSTKMLILYPMISS*SLISGK
Trigger: CTTCCCAGAGATCAGGCTCCAGGAAGAGATCATGGG...ATACAGTATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCCTAAACTTGACAGTTTaGAGATGTTGCTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLSKLSWAEGMETMKQNILNLTV*RCCCRG
Trigger: CCCTCTGCAGCAACATCTCCAAACTGTCAAGTTTAG...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCCTATTGATTCGAGTTTaGCAGGAGCCTTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LLSKLSWAEGMETMKQNILLIRV*QEPFWQ
Trigger: TTGCCAAAAAGGCTCCTGTCAAACTCGAATCAATAG...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp TCTCTTTGTCAACATAATCCTTGTACTTTTGTCTCAGCTCTTCTGTGTCTTCTTGCCAGTTGTTTCCTCTaGAGGGAACTGATGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SLCQHNPCTFVSALLCLLASCFL*RELMPK
Trigger: TTTGGGCATCAGTTCCCTTCAGAGGAAACAACTGGC...AAGAAGACACAGAAGAGCTGAGACAAAAGTACAAGGATTATGTTGACAAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp TTCAGCATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTCAAGGCTTTGGCAATTaGCTTCTCTTTGTCAACATA +
Preference number: 4 (lower is better)
Translates to: FSIIKLHFHATHAHDIILQGFGN*LLFVNI
Trigger: TATGTTGACAAAGAGAAGGCAATTGCCAAAGCCTTG...AAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTATGCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR GCA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACACAAGGCTTTGGCAATTaGCTTCTCTTTGTCAACATA +
Preference number: 4 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTQGFGN*LLFVNI
Trigger: TATGTTGACAAAGAGAAGGCAATTGCCAAAGCCTTG...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TCTCTTTGTCAACATAATCCTTGTACTTTTGTCTCAGCTCTTCTGTGTCTTCTTCAGATCGTTCTTTCTTaGTGGGAAGGCTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SLCQHNPCTFVSALLCLLQIVLS*WEGFSL
Trigger: CAGGGAGAAGCCTTCCCAGCAAGAAAGAACGATCTG...AAGAAGACACAGAAGAGCTGAGACAAAAGTACAAGGATTATGTTGACAAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR GCA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAAATCACCAAATCTCACTaGTTCCAGACAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKITKSH*FQTIKL
Trigger: CAGCTTTATTGTCTGGAAGCAGTGAGATTTGGTGAT...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp TTTACTCTTTTGAGAATTTGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTAGGAAAATGCCAAAGTaGGAATTGTTAACCTCATCA +
Preference number: 4 (lower is better)
Translates to: FTLLRICEGRNRALAQVSRKMPK*ELLTSS
Trigger: TGATGAGGTTAACAATTCCCACTTTGGCATTTTCCT...ACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR TCA 90 bp TGGGATAACGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCTTCACTTACACAGATaGTTTCATTTTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: WDNVTSPKMVKDTTPKWWLHLHR*FHFSSA
Trigger: AGCACTGGAAAAATGAAATCATCTGTGTAAGTGAAG...CCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACGTTATCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCATTAGTGATTTGTACTaGAGTGAAAGGGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLSKLSWAEGMETMKQNIISDLY*SERASF
Trigger: AAAGGAGGCCCTTTCACTGCAGTACAAATCACTAAT...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR GCA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACAGGGGGCACTACATACTaGAAATTACTTAACATTTTG +
Preference number: 4 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTGGTTY*KLLNIL
Trigger: CAAAATGTTAAGTAATTTGCAGTATGTAGTGCCCCC...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATAATACTTGACAACGATTaGAATGGGATCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLIILDND*NGICSP
Trigger: GGGAGAACAGATCCCATTCCAATCGTTGTCAAGTAT...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CCA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATACAAAAATCCCAATACTaGGGGCACTACATACTGCAA +
Preference number: 4 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLIQKSQY*GHYILQ
Trigger: TTGCAGTATGTAGTGCCCCCAGTATTGGGATTTTTG...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TGTGTCTTCTGTCTCAGACCCATGGCTACCCCCAGGCTCCTGCTTGTTCAGGCCGACCGGCTGCTCCGTTaGGTGCCTGCTCTTCGCTGG +
Preference number: 5 (lower is better)
Translates to: CVFCLRPMATPRLLLVQADRLLR*VPALRW
Trigger: CCAGCGAAGAGCAGGCACCAAACGGAGCAGCCGGTC...GGCCTGAACAAGCAGGAGCCTGGGGGTAGCCATGGGTCTGAGACAGAAGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TACGACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGATCTCCACTACTGGGTaGGCTCCGATGGCTAGACCG +
Preference number: 5 (lower is better)
Translates to: YDYNCCCGCGPGILSALWISTTG*APMARP
Trigger: CGGTCTAGCCATCGGAGCCAACCCAGTAGTGGAGAT...CCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TACGACTACAACTGCTGCTGCGGCTGCGGCCCCGGGATCTTGAGCGCTCTCTGGAAGTCTCGGTCTTCGTaGAAGCGGGAGAAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: YDYNCCCGCGPGILSALWKSRSS*KREKRS
Trigger: GGACCGCTTCTCCCGCTTCAACGAAGACCGAGACTT...CCAGAGAGCGCTCAAGATCCCGGGGCCGCAGCCGCAGCAGCAGTTGTAGTCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp AGGCAGCAAGCTGGACTCCACAGGGCCTGGCTGACTGCTGCTATCCAGGGACTCGAGTCATGGGAGCGCTaGGAGTGCCTTCGTGATCTG +
Preference number: 5 (lower is better)
Translates to: RQQAGLHRAWLTAAIQGLESWER*ECLRDL
Trigger: CAGATCACGAAGGCACTCCAAGCGCTCCCATGACTC...GAGTCCCTGGATAGCAGCAGTCAGCCAGGCCCTGTGGAGTCCAGCTTGCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCCTGAATGTGGATGGGTaGCAGGGCTGGTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: WCGTATPRGFWFGSSFRILNVDG*QGWCGW
Trigger: CCAGCCACACCAGCCCTGCAACCCATCCACATTCAG...GATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp AGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGGGCGCCGGCCAGACCTaGAGCGGCTGCGGGAATGCT +
Preference number: 5 (lower is better)
Translates to: SLFSLLCQLMEPPKGFFLGAGQT*SGCGNA
Trigger: AGCATTCCCGCAGCCGCTCAAGGTCTGGCCGGCGCC...CAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTCTCTCCGCCTTCTTCTaGGTGGTGCGGGACTGCCAC +
Preference number: 5 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGLSAFF*VVRDCH
Trigger: GTGGCAGTCCCGCACCACCAAGAAGAAGGCGGAGAG...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CACCTTTGGGTCAGTGTGTTAATTAGGGCTGAGAGCCTGGGTGAAAGGCAAGAAGGCGCCGGCCAGACCTaGAGCGGCTGCGGGAATGCT +
Preference number: 5 (lower is better)
Translates to: HLWVSVLIRAESLGERQEGAGQT*SGCGNA
Trigger: AGCATTCCCGCAGCCGCTCAAGGTCTGGCCGGCGCC...TTCTTGCCTTTCACCCAGGCTCTCAGCCCTAATTAACACACTGACCCAAAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TGCCTCTTCTGGGATGAGGGATACCAAGATAACAGTGCCAAATGTGTGGCTCCGCCCCCAGGCTCCTGCTaGTTCAGGCCGCTACAGGCA +
Preference number: 5 (lower is better)
Translates to: CLFWDEGYQDNSAKCVAPPPGSC*FRPLQA
Trigger: TGCCTGTAGCGGCCTGAACAAGCAGGAGCCTGGGGG...CGGAGCCACACATTTGGCACTGTTATCTTGGTATCCCTCATCCCAGAAGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCCCACCTTCATCCTTTTaGCCACTGCTCCCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: WCGTATPRGFWFGSSFRIPPSSF*PLLPSS
Trigger: TGAAGAGGGGAGCAGTGGCAAAAAGGATGAAGGTGG...GATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCGGGAAGGTGGACCTGTaGCTTTACTGTCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: WCGTATPRGFWFGSSFRIGKVDL*LYCHLL
Trigger: GAGGAGATGACAGTAAAGCAACAGGTCCACCTTCCC...GATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CTTCCACCACTAGAACAGCTTGGCCTTCCCTGTGGCGCTGAGAAGGCAAGACCAAGTTATGGGAGATGGTaGGGTCCCCAGGGTAGCAGT +
Preference number: 5 (lower is better)
Translates to: LPPLEQLGLPCGAEKARPSYGRW*GPQGSS
Trigger: ACTGCTACCCTGGGGACCCAACCATCTCCCATAACT...TGGTCTTGCCTTCTCAGCGCCACAGGGAAGGCCAAGCTGTTCTAGTGGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTACTGCTGCTGGATGTGTaGCTGAGCAGCCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALLLLDV*LSSLLE
Trigger: CTCCAGCAGGCTGCTCAGCAACACATCCAGCAGCAG...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp GTGGTGCGGGACTGCCACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATTACCTTCTGCAGTCCTaGGTCAGAACTCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: VVRDCHSQGVLVWVLVQNYLLQS*VRTLLI
Trigger: GATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTA...ATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTGGCAGTCCCGCACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp AGATGGGGTGAAGTAGTGGGTGAAGGTGAAGTGCAGTGGCAGCTGCTGCAGCAGTGTCTTTTCTGCTCCTaGGCTTGCTGCCGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: RWGEVVGEGEVQWQLLQQCLFCS*ACCRLD
Trigger: ATCAAGGCGGCAGCAAGCCAAGGAGCAGAAAAGACA...CTGCTGCAGCAGCTGCCACTGCACTTCACCTTCACCCACTACTTCACCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAACTCTCCGCCTTCTTCTaGGTGGTGCGGGACTGCCAC +
Preference number: 5 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGELSAFF*VVRDCH
Trigger: GTGGCAGTCCCGCACCACCAAGAAGAAGGCGGAGAG...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp AGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGTCCCTCCTCCCACCATGGTCTaGGGAGCTGCTACCACCCCC +
Preference number: 5 (lower is better)
Translates to: SPWSELFSSGFVPSSEVPPPTMV*GAATTP
Trigger: GGGGGTGGTAGCAGCTCCCAAGACCATGGTGGGAGG...AGGGACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGTTTGCGGCCCCGGGATCTaGAGCGCTCTCTGGTATGAC +
Preference number: 5 (lower is better)
Translates to: LVFFALPTHGAAEGLFPVCGPGI*SALWYD
Trigger: GTCATACCAGAGAGCGCTCAAGATCCCGGGGCCGCA...AACAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTGCCACTGTGGTTGGTTaGAACATGGGACCACTTCCA +
Preference number: 5 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGATVVG*NMGPLP
Trigger: TGGAAGTGGTCCCATGTTCAAACCAACCACAGTGGC...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CACCTTTGGGTCAGTGTGTTAATTAGGGCTGAGAGCCTGGGTGAAAGGCAAGAACTGAATGTGGATGGGTaGCAGGGCTGGTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: HLWVSVLIRAESLGERQELNVDG*QGWCGW
Trigger: CCAGCCACACCAGCCCTGCAACCCATCCACATTCAG...TTCTTGCCTTTCACCCAGGCTCTCAGCCCTAATTAACACACTGACCCAAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGCCAAAACTCAATTCTTaGGCTGTCAGACACTGCCCA +
Preference number: 5 (lower is better)
Translates to: HSQGVLVWVLVQNLLGLMPKLNS*AVRHCP
Trigger: TGGGCAGTGTCTGACAGCCAAAGAATTGAGTTTTGG...CATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTAAGTCTCGGTCTTCGTaGAAGCGGGAGAAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: QLVFFALPTHGAAEGLFPKSRSS*KREKRS
Trigger: GGACCGCTTCTCCCGCTTCAACGAAGACCGAGACTT...AGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp TTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCTGGCTTGCTGCCGCCTaGATGCAGCTTTTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: FQVHIQLVFFALPTHGAAWLAAA*MQLLGL
Trigger: CAAGCCTAAAAGCTGCATCAAGGCGGCAGCAAGCCA...GGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTATTCTTTGCCTCAGCTTaGCTTCCTGGTTCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALFFASA*LPGSEG
Trigger: GCCCTCAGAACCAGGAAGCAAAGCTGAGGCAAAGAA...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp ATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACCCCCCAGGCTCCTGCTaGTTCAGGCCGCTACAGGCA +
Preference number: 5 (lower is better)
Translates to: IIKLHFHATHAHDIILDNPPGSC*FRPLQA
Trigger: TGCCTGTAGCGGCCTGAACAAGCAGGAGCCTGGGGG...GTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAACCTCCCACCATGGTCTaGGGAGCTGCTACCACCCCC +
Preference number: 5 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKPPTMV*GAATTP
Trigger: GGGGGTGGTAGCAGCTCCCAAGACCATGGTGGGAGG...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAAGACCGGCTGCTCCGTTaGGTGCCTGCTCTTCGCTGG +
Preference number: 5 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKDRLLR*VPALRW
Trigger: CCAGCGAAGAGCAGGCACCAAACGGAGCAGCCGGTC...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp ACATGGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCTGCTGCTGGATGTGTaGCTGAGCAGCCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TWDHFQVHIQLVFFALPTLLLDV*LSSLLE
Trigger: CTCCAGCAGGCTGCTCAGCAACACATCCAGCAGCAG...AGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTATGGAAAGGCCTTTACTaGCTTGGCCAGAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALWKGLY*LGQKLL
Trigger: CAGCAGCTTCTGGCCAAGCAAGTAAAGGCCTTTCCA...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAAAAGTCTCGGTCTTCGTaGAAGCGGGAGAAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQKSRSS*KREKRS
Trigger: GGACCGCTTCTCCCGCTTCAACGAAGACCGAGACTT...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGCCACTGTGGTTGGTTaGAACATGGGACCACTTCCA +
Preference number: 5 (lower is better)
Translates to: FQVHIQLVFFALPTHGAAATVVG*NMGPLP
Trigger: TGGAAGTGGTCCCATGTTCAAACCAACCACAGTGGC...GGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp TCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCCCAGATCGTTCTTTCTaGCTGGGAAGGCTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: SACFLCSANSWSRRRAFSPDRSF*LGRLLP
Trigger: AGGGAGAAGCCTTCCCAGCAAGAAAGAACGATCTGG...GGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCCCCAGGGGGTTCTGGTTaGGGTCCTCGTTCAGAATCT +
Preference number: 5 (lower is better)
Translates to: PMPMTSYLTTIGMGSVLPPGGSG*GPRSES
Trigger: AGATTCTGAACGAGGACCCAAACCAGAACCCCCTGG...GGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCGCTGGGAGTCATCTaGAGCTCTCCGCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVPLGVI*SSPPSS
Trigger: AGAAGAAGGCGGAGAGCTCAAGATGACTCCCAGCGG...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATCCGCTGGGAGTCATCTaGAGCTCTCCGCCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDPLGVI*SSPPSS
Trigger: AGAAGAAGGCGGAGAGCTCAAGATGACTCCCAGCGG...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp AGATGGGGTGAAGTAGTGGGTGAAGGTGAAGTGCAGTGGCAGCTGCTGCAGCAGAATATTTGTGCCGTTTaGATCGGTGTTTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RWGEVVGEGEVQWQLLQQNICAV*IGVWSW
Trigger: CCAGCTCCAAACACCGATCAAAACGGCACAAATATT...CTGCTGCAGCAGCTGCCACTGCACTTCACCTTCACCCACTACTTCACCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACAATAGCTCCGGCTCCGTaGCCAGCTGTGGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTIAPAP*PAVGCG
Trigger: ACCACAGCCCACAGCTGGCAACGGAGCCGGAGCTAT...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTGCAGCCTGCTGGAGCTaGCTGTACTTCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVAACWS*LYFSIS
Trigger: GGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTGC...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCGCAGCCTGCTGGAGCTaGCTGTACTTCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: LLAGINGSTPPREHLWVSAACWS*LYFSIS
Trigger: GGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCTGC...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAGCCACTGTGGTTGGTTaGAACATGGGACCACTTCCA +
Preference number: 5 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGEATVVG*NMGPLP
Trigger: TGGAAGTGGTCCCATGTTCAAACCAACCACAGTGGC...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTATCTTCTCATCGGGTTTaGTTCCATCTTCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALSSHRV*FHLQRS
Trigger: GGACCTCTGAAGATGGAACAAAACCCGATGAGAAGA...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp TGGAAGTTAAAGAAAATGCCCCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCCAGGGGGTTCTGGTTaGGGTCCTCGTTCAGAATCT +
Preference number: 5 (lower is better)
Translates to: WKLKKMPLGRQRGSQSMAPGGSG*GPRSES
Trigger: AGATTCTGAACGAGGACCCAAACCAGAACCCCCTGG...AGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGGGGCATTTTCTTTAACTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGTTGGTGGAAGTTCACCTTaGTGTTTCCTCCCACCATGG +
Preference number: 5 (lower is better)
Translates to: LVFFALPTHGAAEGLFPVGGSSP*CFLPPW
Trigger: CCATGGTGGGAGGAAACACAAAGGTGAACTTCCACC...AACAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp AGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGTCCCTAGGCATCTGAGCTACTaGAGTAAGAACGCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: SPWSELFSSGFVPSSEVPRHLSY*SKNAGR
Trigger: CCTCCCGGCGTTCTTACTCAAGTAGCTCAGATGCCT...AGGGACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATAGGCATCTGAGCTACTaGAGTAAGAACGCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDRHLSY*SKNAGR
Trigger: CCTCCCGGCGTTCTTACTCAAGTAGCTCAGATGCCT...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CACTCCCAGGGGGTTCTGGTTTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGTCAGAAGATGAATATTaGTGCCGTTTTGATCGGTGT +
Preference number: 5 (lower is better)
Translates to: HSQGVLVWVLVQNLLGLMSEDEY*CRFDRC
Trigger: ACACCGATCAAAACGGCACAAATATTCATCTTCTGA...CATCAGCCCCAGCAGATTCTGAACGAGGACCCAAACCAGAACCCCCTGGGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CCAGCTGACTGCTGCCCATTAGCTCAAAAATCCCAATACTGGGGGCACTACATAGGGAAGGTGGACCTGTaGCTTTACTGTCATCTCCTC +
Preference number: 5 (lower is better)
Translates to: PADCCPLAQKSQYWGHYIGKVDL*LYCHLL
Trigger: GAGGAGATGACAGTAAAGCAACAGGTCCACCTTCCC...TATGTAGTGCCCCCAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTAAGGCCTTTACTTGCTaGGCCAGAAGCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVKAFTC*ARSCCW
Trigger: CCAGCAGCAGCTTCTGGCCAAGCAAGTAAAGGCCTT...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CTTCCACCACTAGAACAGCTTGGCCTTCCCTGTGGCGCTGAGAAGGCAAGACCAATGCCAAAGTGGGAATaGTTAACCTCATCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: LPPLEQLGLPCGAEKARPMPKWE*LTSSKE
Trigger: CTCCTTTGATGAGGTTAACAATTCCCACTTTGGCAT...TGGTCTTGCCTTCTCAGCGCCACAGGGAAGGCCAAGCTGTTCTAGTGGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TGGAATGGGATCTGTTCTCCCACTGCTAAGATTACCATCACCACAACAAGTCCAAAGTCTCGGTCTTCGTaGAAGCGGGAGAAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: WNGICSPTAKITITTTSPKSRSS*KREKRS
Trigger: GGACCGCTTCTCCCGCTTCAACGAAGACCGAGACTT...TGGACTTGTTGTGGTGATGGTAATCTTAGCAGTGGGAGAACAGATCCCATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586037.5
ENST00000592746.5
CDS-3UTR CAA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTAAGTGGTATTAGTGATTaGTACTGCAGTGAAAGGGCC +
Preference number: 5 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALSGISD*YCSERA
Trigger: GGCCCTTTCACTGCAGTACAAATCACTAATACCACT...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp TTTACTCTTTTGAGAATTTGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTTGGCTTGCTGCCGCCTaGATGCAGCTTTTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: FTLLRICEGRNRALAQVSWLAAA*MQLLGL
Trigger: CAAGCCTAAAAGCTGCATCAAGGCGGCAGCAAGCCA...ACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATTGTCTTTTCTGCTCCTaGGCTTGCTGCCGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDCLFCS*ACCRLD
Trigger: ATCAAGGCGGCAGCAAGCCAAGGAGCAGAAAAGACA...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCCTCCTAAGGCCTTCTTaGCCTCAGCTTTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LLAGINGSTPPREHLWVSLLRPS*PQLCFL
Trigger: CAGGAAGCAAAGCTGAGGCAAAGAAGGCCTTAGGAG...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp GTAGTTATGGGAGATGGTTGGGTCCCCAGGGTAGCAGTCAGAATGTGCTGGGGTGTTTCTTTAGAAGAGTaGGACTCACACATTTGGGTC +
Preference number: 5 (lower is better)
Translates to: VVMGDGWVPRVAVRMCWGVSLEE*DSHIWV
Trigger: GACCCAAATGTGTGAGTCCAACTCTTCTAAAGAAAC...ACCCCAGCACATTCTGACTGCTACCCTGGGGACCCAACCATCTCCCATAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp AGAGGGGCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAGGACCAGTAGGATGTTaGGGTCCTTCTTGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: RGAKEAEVVIPLVSVMGEGPVGC*GPSWLS
Trigger: AGAAAGCCAAGAAGGACCCAAACATCCTACTGGTCC...TTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGCCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TGGAAGTTAAAGAAAATGCCCCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCCAGATCGTTCTTTCTaGCTGGGAAGGCTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: WKLKKMPLGRQRGSQSMAPDRSF*LGRLLP
Trigger: AGGGAGAAGCCTTCCCAGCAAGAAAGAACGATCTGG...AGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGGGGCATTTTCTTTAACTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAAGAGTCATGGGAGCGCTaGGAGTGCCTTCGTGATCTG +
Preference number: 5 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKESWER*ECLRDL
Trigger: CAGATCACGAAGGCACTCCAAGCGCTCCCATGACTC...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATATGCGGCCCCGGGATCTaGAGCGCTCTCTGGTATGAC +
Preference number: 5 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLICGPGI*SALWYD
Trigger: GTCATACCAGAGAGCGCTCAAGATCCCGGGGCCGCA...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCAAAGGCCTTTACTTGCTaGGCCAGAAGCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPKAFTC*ARSCCW
Trigger: CCAGCAGCAGCTTCTGGCCAAGCAAGTAAAGGCCTT...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAAAAATGTGTGGCTCCGTaGATGTGGGAACTGGATGGA +
Preference number: 5 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQKCVAP*MWELDG
Trigger: TCCATCCAGTTCCCACATCAACGGAGCCACACATTT...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CATCACCACAACAAGTCCAGGATCATAATGCCTGAAGAGATTTTCCCAATCCCTAAGCGGTCCGCCATTTaGCCGCCTTCACTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: HHHNKSRIIMPEEIFPIPKRSAI*PPSLLS
Trigger: TGAGAGGAGTGAAGGCGGCAAAATGGCGGACCGCTT...AGGGATTGGGAAAATCTCTTCAGGCATTATGATCCTGGACTTGTTGTGGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586037.5
ENST00000592746.5
CDS-3UTR CAA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAAAAGCGGTCCGCCATTTaGCCGCCTTCACTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKKRSAI*PPSLLS
Trigger: TGAGAGGAGTGAAGGCGGCAAAATGGCGGACCGCTT...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp ATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACAAGCGGTCCGCCATTTaGCCGCCTTCACTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: IIKLHFHATHAHDIILDNKRSAI*PPSLLS
Trigger: TGAGAGGAGTGAAGGCGGCAAAATGGCGGACCGCTT...GTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000592746.5
CDS-3UTR CAA 90 bp TCAGCTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCAGGTGCACATTCAGCTaGTTTTCTTTGCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: SACFLCSANSWSRRRAFSRCTFS*FSLLCQ
Trigger: TTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCT...GGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp ATGCTTCTGAATCAGATGAGTACTGAACAGGTAGGAGGGTGGGAGGGCAGTCAATACCTTCTGCAGTCCTaGGTCAGAACTCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: MLLNQMSTEQVGGWEGSQYLLQS*VRTLLI
Trigger: GATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTA...TTGACTGCCCTCCCACCCTCCTACCTGTTCAGTACTCATCTGATTCAGAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTATCTTCTGTGTCAGCCTaGTGTTTACGTTTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALSSVSA*CLRLCL
Trigger: CAAACACAAACGTAAACACAAGGCTGACACAGAAGA...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCAGGTGGAAGTTCACCTTaGTGTTTCCTCCCACCATGG +
Preference number: 5 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPGGSSP*CFLPPW
Trigger: CCATGGTGGGAGGAAACACAAAGGTGAACTTCCACC...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCATCTCCACTACTGGGTaGGCTCCGATGGCTAGACCG +
Preference number: 5 (lower is better)
Translates to: LLSKLSWAEGMETMKQNIISTTG*APMARP
Trigger: CGGTCTAGCCATCGGAGCCAACCCAGTAGTGGAGAT...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CCAGCTGACTGCTGCCCATTAGCTCAAAAATCCCAATACTGGGGGCACTACATACTAATAAGGGGCCAGTaGTTTCCTCTGAAGGGAACT +
Preference number: 5 (lower is better)
Translates to: PADCCPLAQKSQYWGHYILIRGQ*FPLKGT
Trigger: AGTTCCCTTCAGAGGAAACAACTGGCCCCTTATTAG...TATGTAGTGCCCCCAGTATTGGGATTTTTGAGCTAATGGGCAGCAGTCAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp ATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACAGTTATGGGAGATGGTaGGGTCCCCAGGGTAGCAGT +
Preference number: 5 (lower is better)
Translates to: IIKLHFHATHAHDIILDNSYGRW*GPQGSS
Trigger: ACTGCTACCCTGGGGACCCAACCATCTCCCATAACT...GTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCCCTGGCCCTAAGTCAAGAGTTGTGTTaGCCTGCCACTTTCTTTTCA +
Preference number: 5 (lower is better)
Translates to: LMAQHPQGNIYGSPPLALSQELC*PATFFS
Trigger: TGAAAAGAAAGTGGCAGGCAAACACAACTCTTGACT...TAGGGCCAGGGGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp ATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCACTGCTAAGATTACCAAGTCTCGGTCTTCGTaGAAGCGGGAGAAGCGGTCC +
Preference number: 5 (lower is better)
Translates to: IILDNDWNGICSPTAKITKSRSS*KREKRS
Trigger: GGACCGCTTCTCCCGCTTCAACGAAGACCGAGACTT...GGTAATCTTAGCAGTGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586037.5
ENST00000592746.5
CDS-3UTR CAA 90 bp CCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCCCCCATGACATCATACTaGACAACGATTGGAATGGGA +
Preference number: 5 (lower is better)
Translates to: PMPMTSYLTTIGMGSVLPPMTSY*TTIGMG
Trigger: TCCCATTCCAATCGTTGTCAAGTATGATGTCATGGG...GGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp TTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCAGGTCTTCCAAGGCTTaGGCAATTGCCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: FHATHAHDIILDNDWNGIRSSKA*AIAFSL
Trigger: CAAAGAGAAGGCAATTGCCAAAGCCTTGGAAGACCT...GATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp TTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCCATCCTTGCGGGATCTaGAAGAGACATTTCGAGCAA +
Preference number: 5 (lower is better)
Translates to: FHATHAHDIILDNDWNGIHPCGI*KRHFEQ
Trigger: TTGCTCGAAATGTCTCTTCAAGATCCCGCAAGGATG...GATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp TTCAGCATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTTTCTTTGCCTCAGCTTaGCTTCCTGGTTCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: FSIIKLHFHATHAHDIILFFASA*LPGSEG
Trigger: GCCCTCAGAACCAGGAAGCAAAGCTGAGGCAAAGAA...AAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTATGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTCTCCTAAGGCCTTCTTaGCCTCAGCTTTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LGPRSESAGADDLFFFRFLLRPS*PQLCFL
Trigger: CAGGAAGCAAAGCTGAGGCAAAGAAGGCCTTAGGAG...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp ACATGGGACCACTTCCAGGTGCACATTCAGCTTGTTTTCTTTGCTCTGCCAACTCTTGGAGATGGTCCTTaGAGGAGCTTCCTATATCCT +
Preference number: 5 (lower is better)
Translates to: TWDHFQVHIQLVFFALPTLGDGP*RSFLYP
Trigger: AGGATATAGGAAGCTCCTCAAAGGACCATCTCCAAG...AGTTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCTGGAAGTGGTCCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCTCTCCGCCCACTTCCTaGCTTTTATTTGGCTCACCA +
Preference number: 5 (lower is better)
Translates to: YLLQSLVRTLLIGFCSIFSPPTS*LLFGSP
Trigger: TGGTGAGCCAAATAAAAGCAAGGAAGTGGGCGGAGA...GAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGCTTCTTTTTCTTTTaGTGCCGGTGGGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: FHATHAHDIILDNDWNGICFFFF*CRWDFP
Trigger: TGGGAAGTCCCACCGGCACAAAAAGAAAAAGAAGCA...GATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TCTCTTTGTCAACATAATCCTTGTACTTTTGTCTCAGCTCTTCTGTGTCTTCTTATAGCTCCGGCTCCGTaGCCAGCTGTGGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: SLCQHNPCTFVSALLCLLIAPAP*PAVGCG
Trigger: ACCACAGCCCACAGCTGGCAACGGAGCCGGAGCTAT...AAGAAGACACAGAAGAGCTGAGACAAAAGTACAAGGATTATGTTGACAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp AGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCAGAGGTCCCTTTCTCCAGTAGCAGTTaGGCAGTGACAGAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SPWSELFSSGFVPSSEVPFSSSS*AVTEFL
Trigger: CAAGAACTCTGTCACTGCCAAACTGCTACTGGAGAA...AGGGACCTCTGAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp GCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTCTAATAAGGGGCCAGTaGTTTCCTCTGAAGGGAACT +
Preference number: 5 (lower is better)
Translates to: ATHAHDIILDNDWNGICSLIRGQ*FPLKGT
Trigger: AGTTCCCTTCAGAGGAAACAACTGGCCCCTTATTAG...AGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp GACGCTTTCCACCTCACCTGGGATAACGTAACGTCACCAAAGATGGTCAAAGATCCAAAACTCAATTCTTaGGCTGTCAGACACTGCCCA +
Preference number: 5 (lower is better)
Translates to: DAFHLTWDNVTSPKMVKDPKLNS*AVRHCP
Trigger: TGGGCAGTGTCTGACAGCCAAAGAATTGAGTTTTGG...ATCTTTGACCATCTTTGGTGACGTTACGTTATCCCAGGTGAGGTGGAAAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TGGAAGTTAAAGAAAATGCCCCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCAGACAATAAAGCTGTaGAATCCCCTCCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: WKLKKMPLGRQRGSQSMAQTIKL*NPLLLL
Trigger: GAGGAGAAGGAGGGGATTCAACAGCTTTATTGTCTG...AGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGGGGCATTTTCTTTAACTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTCAATCTACAAGCTAATGGGATACTCTTTTGAGAATTaGCGAAGGCAGGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: PRKAKRQPEYGSIYKLMGYSFEN*RRQEQS
Trigger: GCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTA...TCCCATTAGCTTGTAGATTGAGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACAGAGGGCAGTCAAGAGTaGTGTTTGCCTGCCACTTTC +
Preference number: 5 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTEGSQE*CLPATF
Trigger: GAAAGTGGCAGGCAAACACAACTCTTGACTGCCCTC...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS CCA 90 bp GTGCAAAGCCAAACCAACAGCTCATTTTACACATTGGGTTTTGGGTaGTTAGAGATCTTGCCTTGGAGTGCAGAGACCAGAAAGCTACAG +
Preference number: 5 (lower is better)
Translates to: VQSQTNSSFYTLGFG*LEILPWSAETRKLQ
Trigger: CTGTAGCTTTCTGGTCTCTGCACTCCAAGGCAAGATCTCTAACCACCCAAAACCCAATGTGTAAAATGAGCTGTTGGTTTGGCTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635257.1
CDS-3UTR CAA 90 bp CATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCCTGCCAAGGCTTTGGCAATaGCCTTCTCTTTGTCAACAT +
Preference number: 5 (lower is better)
Translates to: HAHDIILDNDWNGICSPLPRLWQ*PSLCQH
Trigger: ATGTTGACAAAGAGAAGGCAATTGCCAAAGCCTTGG...CAGGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp TTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCCCAAGGCTTTGGCAATaGCCTTCTCTTTGTCAACAT +
Preference number: 5 (lower is better)
Translates to: FHATHAHDIILDNDWNGIPRLWQ*PSLCQH
Trigger: ATGTTGACAAAGAGAAGGCAATTGCCAAAGCCTTGG...GATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp TTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCAGGTGCACATTCAGCTaGTTTTCTTTGCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: FHATHAHDIILDNDWNGIRCTFS*FSLLCQ
Trigger: TTGGCAGAGCAAAGAAAACAAGCTGAATGTGCACCT...GATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCAGTGGTATTAGTGATTaGTACTGCAGTGAAAGGGCC +
Preference number: 5 (lower is better)
Translates to: LLAGINGSTPPREHLWVSSGISD*YCSERA
Trigger: GGCCCTTTCACTGCAGTACAAATCACTAATACCACT...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp AAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTGGGCTATTGATTCGAGTTaGACAGGAGCCTTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: KLHFHATHAHDIILDNDWAIDSS*TGAFLA
Trigger: TGCCAAAAAGGCTCCTGTCAAACTCGAATCAATAGC...CCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCTCTTCTCATCGGGTTTaGTTCCATCTTCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: YLLQSLVRTLLIGFCSIFSSHRV*FHLQRS
Trigger: GGACCTCTGAAGATGGAACAAAACCCGATGAGAAGA...GAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CACCTTTGGGTCAGTGTGTTAATTAGGGCTGAGAGCCTGGGTGAAAGGCAAGAAGTTTCTTTAGAAGAGTaGGACTCACACATTTGGGTC +
Preference number: 5 (lower is better)
Translates to: HLWVSVLIRAESLGERQEVSLEE*DSHIWV
Trigger: GACCCAAATGTGTGAGTCCAACTCTTCTAAAGAAAC...TTCTTGCCTTTCACCCAGGCTCTCAGCCCTAATTAACACACTGACCCAAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTGGACCAGTAGGATGTTaGGGTCCTTCTTGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: LGPRSESAGADDLFFFRFGPVGC*GPSWLS
Trigger: AGAAAGCCAAGAAGGACCCAAACATCCTACTGGTCC...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACATCTCCGCCCACTTCCTaGCTTTTATTTGGCTCACCA +
Preference number: 5 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTSPPTS*LLFGSP
Trigger: TGGTGAGCCAAATAAAAGCAAGGAAGTGGGCGGAGA...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTCCTCTTCTGTGTCAGCCTaGTGTTTACGTTTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: LAGINGSTPPREHLWVSSSSVSA*CLRLCL
Trigger: CAAACACAAACGTAAACACAAGGCTGACACAGAAGA...GGAGGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCCCACCTTCATCCTTTTaGCCACTGCTCCCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LLSKLSWAEGMETMKQNIPPSSF*PLLPSS
Trigger: TGAAGAGGGGAGCAGTGGCAAAAAGGATGAAGGTGG...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTGCAGTGACAGAGTTCTaGTCTTCAGGACTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LGPRSESAGADDLFFFRFAVTEF*SSGLQS
Trigger: TGACTGCAGTCCTGAAGACAAGAACTCTGTCACTGC...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCTGGAAAGGCCTTTACTaGCTTGGCCAGAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LLSKLSWAEGMETMKQNIWKGLY*LGQKLL
Trigger: CAGCAGCTTCTGGCCAAGCAAGTAAAGGCCTTTCCA...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCCATCCCAGCTTCTACTaGCTGGTATTAATGGCTCAA +
Preference number: 5 (lower is better)
Translates to: LLAGINGSTPPREHLWVSHPSFY*LVLMAQ
Trigger: TTGAGCCATTAATACCAGCAAGTAGAAGCTGGGATG...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCAGGGAACTGGATGGAATaGCAGCCTGAGTTATATCAG +
Preference number: 5 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPGNWME*QPELYQ
Trigger: CTGATATAACTCAGGCTGCAATTCCATCCAGTTCCC...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTCCATCTTCGGCGATTCTATAGGCTaGTCAAGTGACGCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: YLLQSLVRTLLIGFCSIFGDSIG*SSDACS
Trigger: TGAACAAGCGTCACTTGACAAGCCTATAGAATCGCC...GAAGATGGAACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CTTGACAACGATTGGAATGGGATCTGTTCTCCCACTGCTAAGATTACCATCACCCCCATGACATCATACTaGACAACGATTGGAATGGGA +
Preference number: 5 (lower is better)
Translates to: LDNDWNGICSPTAKITITPMTSY*TTIGMG
Trigger: TCCCATTCCAATCGTTGTCAAGTATGATGTCATGGG...GGTGATGGTAATCTTAGCAGTGGGAGAACAGATCCCATTCCAATCGTTGTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592746.5
CDS-3UTR CAA 90 bp TTTACTCTTTTGAGAATTTGCGAAGGCAGGAACAGAGCCTTGGCCCAGGTAAGTCCAAGGCTTTGGCAATaGCCTTCTCTTTGTCAACAT +
Preference number: 5 (lower is better)
Translates to: FTLLRICEGRNRALAQVSPRLWQ*PSLCQH
Trigger: ATGTTGACAAAGAGAAGGCAATTGCCAAAGCCTTGG...ACTTACCTGGGCCAAGGCTCTGTTCCTGCCTTCGCAAATTCTCAAAAGAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TTCAGCATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTAGGTCTTCCAAGGCTTaGGCAATTGCCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: FSIIKLHFHATHAHDIILRSSKA*AIAFSL
Trigger: CAAAGAGAAGGCAATTGCCAAAGCCTTGGAAGACCT...AAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTATGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp ATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACCATCCTTGCGGGATCTaGAAGAGACATTTCGAGCAA +
Preference number: 5 (lower is better)
Translates to: IIKLHFHATHAHDIILDNHPCGI*KRHFEQ
Trigger: TTGCTCGAAATGTCTCTTCAAGATCCCGCAAGGATG...GTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp GCAAAAGAGGCTGAGGTGGTAATTCCTCTTGTCAGTGTCATGGGAGAAAAGAAACATCCTTGCGGGATCTaGAAGAGACATTTCGAGCAA +
Preference number: 5 (lower is better)
Translates to: AKEAEVVIPLVSVMGEKKHPCGI*KRHFEQ
Trigger: TTGCTCGAAATGTCTCTTCAAGATCCCGCAAGGATG...TTTCTTTTCTCCCATGACACTGACAAGAGGAATTACCACCTCAGCCTCTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTTCCTCCGCATGGTCCTaGAAAACTGATGCTATTGAT +
Preference number: 5 (lower is better)
Translates to: SSSISMRPMPMTSYLTTISSAWS*KTDAID
Trigger: ATCAATAGCATCAGTTTTCAAGGACCATGCGGAGGA...AATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TGGAAGTTAAAGAAAATGCCCCTAGGAAGGCAAAGAGGCAGCCAGAGTATGGCTTTAATTTGGATAATGTaGAGGCAAGGGACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: WKLKKMPLGRQRGSQSMALIWIM*RQGTLH
Trigger: ATGGAGGGTCCCTTGCCTCAACATTATCCAAATTAA...AGCCATACTCTGGCTGCCTCTTTGCCTTCCTAGGGGCATTTTCTTTAACTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CTTGTTTTCTTTGCTCTGCCAACTCATGGAGCCGCCGAAGGGCTTTTTCCTGTTATGGAGGGTTCTGCCTaGGTGAAAATTAATAGTTCT +
Preference number: 5 (lower is better)
Translates to: LVFFALPTHGAAEGLFPVMEGSA*VKINSS
Trigger: AGAACTATTAATTTTCACCAAGGCAGAACCCTCCAT...AACAGGAAAAAGCCCTTCGGCGGCTCCATGAGTTGGCAGAGCAAAGAAAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCACCACTAGAACACTTGGAGATGGTCCTTaGAGGAGCTTCCTATATCCT +
Preference number: 5 (lower is better)
Translates to: QRWSKILPQNGGTSTTRTLGDGP*RSFLYP
Trigger: AGGATATAGGAAGCTCCTCAAAGGACCATCTCCAAG...TGTTCTAGTGGTGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp AAACAGCAAAAGTACATGAGGGAGACTGTTAAAGATGAGCATCCCTCAGAAGCCTGCTTCTTTTTCTTTTaGTGCCGGTGGGACTTCCCA +
Preference number: 5 (lower is better)
Translates to: KQQKYMRETVKDEHPSEACFFFF*CRWDFP
Trigger: TGGGAAGTCCCACCGGCACAAAAAGAAAAAGAAGCA...GGCTTCTGAGGGATGCTCATCTTTAACAGTCTCCCTCATGTACTTTTGCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CACCTTTGGGTCAGTGTGTTAATTAGGGCTGAGAGCCTGGGTGAAAGGCAAGAATCAGAAGATGAATATTaGTGCCGTTTTGATCGGTGT +
Preference number: 5 (lower is better)
Translates to: HLWVSVLIRAESLGERQESEDEY*CRFDRC
Trigger: ACACCGATCAAAACGGCACAAATATTCATCTTCTGA...TTCTTGCCTTTCACCCAGGCTCTCAGCCCTAATTAACACACTGACCCAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TCTCTTTGTCAACATAATCCTTGTACTTTTGTCTCAGCTCTTCTGTGTCTTCTTAAGCGGTCCGCCATTTaGCCGCCTTCACTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: SLCQHNPCTFVSALLCLLKRSAI*PPSLLS
Trigger: TGAGAGGAGTGAAGGCGGCAAAATGGCGGACCGCTT...AAGAAGACACAGAAGAGCTGAGACAAAAGTACAAGGATTATGTTGACAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACGATTTGCGATTCTATAGGCTaGTCAAGTGACGCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: SSSISMRPMPMTSYLTTICDSIG*SSDACS
Trigger: TGAACAAGCGTCACTTGACAAGCCTATAGAATCGCA...AATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590041.5
ENST00000592746.5
CDS-3UTR CAA 90 bp CGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGCACTTCCATCCGATTCTATAGGCTaGTCAAGTGACGCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: RNVTKDGQRYYPKMVALPSDSIG*SSDACS
Trigger: TGAACAAGCGTCACTTGACAAGCCTATAGAATCGGA...TGGAAGTGCCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS GCA 90 bp ATTTTACACATTGGGTTTTGGGTGGTTAGAGATCTTGCCTTGGAGTaGAGAGACCAGAAAGCTACAGTGAACCAAACACAAGCCATTCTC +
Preference number: 5 (lower is better)
Translates to: ILHIGFWVVRDLALE*RDQKATVNQTQAIL
Trigger: GAGAATGGCTTGTGTTTGGTTCACTGTAGCTTTCTGGTCTCTGCACTCCAAGGCAAGATCTCTAACCACCCAAAACCCAATGTGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635257.1
CDS-3UTR CAA 90 bp AAACAGCAAAAGTACATGAGGGAGACTGTTAAAGATGAGCATCCCTCAGAAGCCCCCATGACATCATACTaGACAACGATTGGAATGGGA +
Preference number: 5 (lower is better)
Translates to: KQQKYMRETVKDEHPSEAPMTSY*TTIGMG
Trigger: TCCCATTCCAATCGTTGTCAAGTATGATGTCATGGG...GGCTTCTGAGGGATGCTCATCTTTAACAGTCTCCCTCATGTACTTTTGCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCAGGTCTTCCAAGGCTTaGGCAATTGCCTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LLSKLSWAEGMETMKQNIRSSKA*AIAFSL
Trigger: CAAAGAGAAGGCAATTGCCAAAGCCTTGGAAGACCT...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CCCATGCCCATGACATCATACTTGACAACGATTGGAATGGGATCTGTTCTCCCCCTGATGTTTCTGATATaGCTTATCACACAGTTCACA +
Preference number: 5 (lower is better)
Translates to: PMPMTSYLTTIGMGSVLPLMFLI*LITQFT
Trigger: TGTGAACTGTGTGATAAGCAATATCAGAAACATCAG...GGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp GAGTCTCCTACCTTCTGCAGTCCTTGGTCAGAACTCTTCTCATCGGGTTTTGTTTTTCGTTTTCGTTTCTaGCGCTTCTTAGATTTCTCC +
Preference number: 5 (lower is better)
Translates to: ESPTFCSPWSELFSSGFVFRFRF*RFLDFS
Trigger: GGAGAAATCTAAGAAGCGCAAGAAACGAAAACGAAA...AACAAAACCCGATGAGAAGAGTTCTGACCAAGGACTGCAGAAGGTAGGAGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCTTTCGTTTTCGTTTCTaGCGCTTCTTAGATTTCTCC +
Preference number: 5 (lower is better)
Translates to: LLAGINGSTPPREHLWVSFRFRF*RFLDFS
Trigger: GGAGAAATCTAAGAAGCGCAAGAAACGAAAACGAAA...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATAGCAGTGACAGAGTTCTaGTCTTCAGGACTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLIAVTEF*SSGLQS
Trigger: TGACTGCAGTCCTGAAGACAAGAACTCTGTCACTGC...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CATCACCACAACAAGTCCAGGATCATAATGCCTGAAGAGATTTTCCCAATCCCTTGCGATTCTATAGGCTaGTCAAGTGACGCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: HHHNKSRIIMPEEIFPIPCDSIG*SSDACS
Trigger: TGAACAAGCGTCACTTGACAAGCCTATAGAATCGCA...AGGGATTGGGAAAATCTCTTCAGGCATTATGATCCTGGACTTGTTGTGGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586037.5
ENST00000592746.5
CDS-3UTR CAA 90 bp CTACTTGCTGGTATTAATGGCTCAACACCCCCAAGGGAACATTTATGGGTCTCCCTGATGTTTCTGATATaGCTTATCACACAGTTCACA +
Preference number: 5 (lower is better)
Translates to: LLAGINGSTPPREHLWVSLMFLI*LITQFT
Trigger: TGTGAACTGTGTGATAAGCAATATCAGAAACATCAG...GGAGACCCATAAATGTTCCCTTGGGGGTGTTGAGCCATTAATACCAGCAAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000591680.6
CDS-3UTR CAA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCTCCTCCGCATGGTCCTaGAAAACTGATGCTATTGAT +
Preference number: 5 (lower is better)
Translates to: LLSKLSWAEGMETMKQNISSAWS*KTDAID
Trigger: ATCAATAGCATCAGTTTTCAAGGACCATGCGGAGGA...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp ATAATCAAGCTCCATTTCCATGCGACCCATGCCCATGACATCATACTTGACAACTTAATTTGGATAATGTaGAGGCAAGGGACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: IIKLHFHATHAHDIILDNLIWIM*RQGTLH
Trigger: ATGGAGGGTCCCTTGCCTCAACATTATCCAAATTAA...GTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGAGCTTGATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp ATCACACAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATCATCCCAGCTTCTACTaGCTGGTATTAATGGCTCAA +
Preference number: 5 (lower is better)
Translates to: ITQFTIKVGSEVFQGFGNHPSFY*LVLMAQ
Trigger: TTGAGCCATTAATACCAGCAAGTAGAAGCTGGGATG...ATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTGTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp TTACTGTCTAAACTGAGCTGGGCAGAGGGCATGGAAACTATGAAGCAAAATATCTCTAAACTTGACAGTTaGGAGATGTTGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LLSKLSWAEGMETMKQNISKLDS*EMLLQR
Trigger: CCTCTGCAGCAACATCTCCAAACTGTCAAGTTTAGA...GATATTTTGCTTCATAGTTTCCATGCCCTCTGCCCAGCTCAGTTTAGACAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TGGGATAACGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGGGGGATTATCTAAACTaGACAGTTTGGAGATGTTGC +
Preference number: 5 (lower is better)
Translates to: WDNVTSPKMVKDTTPKWWGDYLN*TVWRCC
Trigger: GCAACATCTCCAAACTGTCAAGTTTAGATAATCCCC...CCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACGTTATCCCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TTGGGTCCTCGTTCAGAATCTGCTGGGGCTGATGACTTATTCTTCTTTCGTTTTATAATCCTTGTACTTTaGTCTCAGCTCTTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: LGPRSESAGADDLFFFRFIILVL*SQLFCV
Trigger: GACACAGAAGAGCTGAGACAAAAGTACAAGGATTAT...AAAACGAAAGAAGAATAAGTCATCAGCCCCAGCAGATTCTGAACGAGGACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587228.5
CDS-3UTR CAA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATAGCTATTGATTCGAGTTaGACAGGAGCCTTTTTGGCA +
Preference number: 5 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLIAIDSS*TGAFLA
Trigger: TGCCAAAAAGGCTCCTGTCAAACTCGAATCAATAGC...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TGGGATAACGTAACGTCACCAAAGATGGTCAAAGATACTACCCCAAAATGGTGGATGGAGGGTTCTGCCTaGGTGAAAATTAATAGTTCT +
Preference number: 5 (lower is better)
Translates to: WDNVTSPKMVKDTTPKWWMEGSA*VKINSS
Trigger: AGAACTATTAATTTTCACCAAGGCAGAACCCTCCAT...CCACCATTTTGGGGTAGTATCTTTGACCATCTTTGGTGACGTTACGTTATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATAAATATTTGTGCCGTTTaGATCGGTGTTTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLINICAV*IGVWSW
Trigger: CCAGCTCCAAACACCGATCAAAACGGCACAAATATT...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp TATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATACTGTATTTCTCCAGTAGCAGTTaGGCAGTGACAGAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: YGSIYKLMGSSTKMLILYFSSSS*AVTEFL
Trigger: CAAGAACTCTGTCACTGCCAAACTGCTACTGGAGAA...ATACAGTATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS-3UTR CAA 90 bp ATCACACAGTTCACAATAAAAGTTGGCTCTGAGGTCTTCCAAGGCTTTGGCAATCTGATGTTTCTGATATaGCTTATCACACAGTTCACA +
Preference number: 5 (lower is better)
Translates to: ITQFTIKVGSEVFQGFGNLMFLI*LITQFT
Trigger: TGTGAACTGTGTGATAAGCAATATCAGAAACATCAG...ATTGCCAAAGCCTTGGAAGACCTCAGAGCCAACTTTTATTGTGAACTGTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587228.5
ENST00000590041.5
CDS-3UTR CAA 90 bp CCAGAGTATGGCTCAATCTACAAGCTAATGGGAAGCAGCACGAAAATGTTAATAATAAACTTTACTCTTTaGAGAATTTGCGAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: PEYGSIYKLMGSSTKMLIINFTL*RICEGR
Trigger: CCTGCCTTCGCAAATTCTCAAAAGAGTAAAGTTTAT...TATTAACATTTTCGTGCTGCTTCCCATTAGCTTGTAGATTGAGCCATACTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591680.6
CDS TCA 90 bp TTTGCTTTCAATACATCAGCTGCTTGTGTGCATGATCATAGGAGTTaGTATGGTTATCAAATTCCTGATGTTTCTGATATTGCTTATCAC +
Preference number: 5 (lower is better)
Translates to: FAFNTSAACVHDHRS*YGYQIPDVSDIAYH
Trigger: GTGATAAGCAATATCAGAAACATCAGGAATTTGATAACCATATCAACTCCTATGATCATGCACACAAGCAGCTGATGTATTGAAAGCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635257.1
CDS CAA 72 bp CGGTCTTCGTTGAAGCGGGAGAAGCGGTCCGCCATTTaGCCGCCTTCACTCCTCTCAGGACGACGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: RSSLKREKRSAI*PPSLLSGRRSP
Trigger: CGGAGAGCGTCGTCCTGAGAGGAGTGAAGGCGGCAAAATGGCGGACCGCTTCTCCCGCTTCAACGAAGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592154.1
CDS TCA 72 bp GATCAAAGTGATTACCCTGAAAGTCTCGGTCTTCGTTaGAGCGGGAGAAGCGGTCCGCCATTTTGCCGCCTT +
Preference number: 6 (lower is better)
Translates to: DQSDYPESLGLR*SGRSGPPFCRL
Trigger: AAGGCGGCAAAATGGCGGACCGCTTCTCCCGCTTCAACGAAGACCGAGACTTTCAGGGTAATCACTTTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000586037.5
ENST00000587228.5
ENST00000588554.1
ENST00000590041.5
ENST00000591680.6
ENST00000592154.1
ENST00000592746.5
CDS TCA 72 bp GGTGTCCAATATTATCCTGAAAGTCTCGGTCTTCGTTaGAGCGGGAGAAGCGGTCCGCCATTTTGCCGCCTT +
Preference number: 6 (lower is better)
Translates to: GVQYYPESLGLR*SGRSGPPFCRL
Trigger: AAGGCGGCAAAATGGCGGACCGCTTCTCCCGCTTCAACGAAGACCGAGACTTTCAGGATAATATTGGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585614.1
CDS CCA 72 bp GCGACCCATGCCCATGACATCATACTTGACAACGATTaGAATGGGATCTGTTCTCCCTGTAACAGGAACACA +
Preference number: 6 (lower is better)
Translates to: ATHAHDIILDND*NGICSPCNRNT
Trigger: TGTGTTCCTGTTACAGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635257.1
CDS CAA 90 bp CAGCTCATTTTACACATTGGGTTTTGGGTGGTTAGAGATCTTGCCTaGGAGTGCAGAGACCAGAAAGCTACAGTGAACCAAACACAAGCC +
Preference number: 6 (lower is better)
Translates to: QLILHIGFWVVRDLA*ECRDQKATVNQTQA
Trigger: GGCTTGTGTTTGGTTCACTGTAGCTTTCTGGTCTCTGCACTCCAAGGCAAGATCTCTAACCACCCAAAACCCAATGTGTAAAATGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635257.1
CDS CAA 72 bp TCCATTTCCATGCGACCCATGCCCATGACATCATACTaGACAACGATTGGAATGGGATCTGTTCTCCCTGTA +
Preference number: 6 (lower is better)
Translates to: SISMRPMPMTSY*TTIGMGSVLPV
Trigger: TACAGGGAGAACAGATCCCATTCCAATCGTTGTCAAGTATGATGTCATGGGCATGGGTCGCATGGAAATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635257.1
CDS CCA 72 bp CAAACCAACAGCTCATTTTACACATTGGGTTTTGGGTaGTTAGAGATCTTGCCTTGGAGTGCAGAGACCAGA +
Preference number: 6 (lower is better)
Translates to: QTNSSFYTLGFG*LEILPWSAETR
Trigger: TCTGGTCTCTGCACTCCAAGGCAAGATCTCTAACCACCCAAAACCCAATGTGTAAAATGAGCTGTTGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635257.1
CDS CAA 72 bp TTACACATTGGGTTTTGGGTGGTTAGAGATCTTGCCTaGGAGTGCAGAGACCAGAAAGCTACAGTGAACCAA +
Preference number: 6 (lower is better)
Translates to: LHIGFWVVRDLA*ECRDQKATVNQ
Trigger: TTGGTTCACTGTAGCTTTCTGGTCTCTGCACTCCAAGGCAAGATCTCTAACCACCCAAAACCCAATGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635257.1
CDS TCA 72 bp ACTTGTAAAGAGTGGCAACATGAAACTCAGGGGATCTaGATTACAGTTCTGTCACTAATGGGGCATGTGACC +
Preference number: 6 (lower is better)
Translates to: TCKEWQHETQGI*ITVLSLMGHVT
Trigger: GGTCACATGCCCCATTAGTGACAGAACTGTAATTCAGATCCCCTGAGTTTCATGTTGCCACTCTTTACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586265.5
CDS GCA 72 bp CGGGATCTTGAAGAGACATTTCGAGCAAACTCTCTCTaGTTCAGATCTTTTAATCTTCTTGTGATCTGGGCT +
Preference number: 6 (lower is better)
Translates to: RDLEETFRANSL*FRSFNLLVIWA
Trigger: AGCCCAGATCACAAGAAGATTAAAAGATCTGAAGCAGAGAGAGTTTGCTCGAAATGTCTCTTCAAGATCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635257.1
CDS TCA 72 bp TCCTTTCCTAGTTTAAACCCAATTAACCACCTTGGCTaGCGTCCAGTTGGGATTAATTTCAAATTACTATGG +
Preference number: 6 (lower is better)
Translates to: SFPSLNPINHLG*RPVGINFKLLW
Trigger: CCATAGTAATTTGAAATTAATCCCAACTGGACGTCAGCCAAGGTGGTTAATTGGGTTTAAACTAGGAAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635257.1
CDS TCA 72 bp AATACATCAGCTGCTTGTGTGCATGATCATAGGAGTTaGTATGGTTATCAAATTCCTGATGTTTCTGATATT +
Preference number: 6 (lower is better)
Translates to: NTSAACVHDHRS*YGYQIPDVSDI
Trigger: AATATCAGAAACATCAGGAATTTGATAACCATATCAACTCCTATGATCATGCACACAAGCAGCTGATGTATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635257.1