Pregenerated sensors for GOLPH3-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272086Ensembl transcript IDs: ENST00000606994.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGAGCAAAGTCCTTCCTGCCGATCCTGCAGACCCCGGAGTCCAAATaGGACCCCGTCCACACGACCGCGGAGTCGCCTCCGAAGACGGCG | + |
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Preference number: 5 (lower is better) Translates to: RAKSFLPILQTPESK*DPVHTTAESPPKTA Trigger: CGCCGTCTTCGGAGGCGACTCCGCGGTCGTGTGGACGGGGTCCCATTTGGACTCCGGGGTCTGCAGGATCGGCAGGAAGGACTTTGCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS CCA 90 bp | TCGAGCGTGCTAACGTGTGCGGTACTAACTGTACTCACTACGCCCTaGTCACTTTATAGCACAAGTCCGAGGCAAGGAAAGAAGTTTTAC | + |
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Preference number: 5 (lower is better) Translates to: SSVLTCAVLTVLTTP*SLYSTSPRQGKKFY Trigger: GTAAAACTTCTTTCCTTGCCTCGGACTTGTGCTATAAAGTGACCAGGGCGTAGTGAGTACAGTTAGTACCGCACACGTTAGCACGCTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS GCA 90 bp | ACGCCAAGAGGATTTCACCTAGTAACTACACGGAGAGACATCCGATaGGTACAAAGACGTGGCATGAAACGCTGCAGGTTTATTGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: TPRGFHLVTTRRDIR*VQRRGMKRCRFIVS Trigger: AGAGACAATAAACCTGCAGCGTTTCATGCCACGTCTTTGTACGCATCGGATGTCTCTCCGTGTAGTTACTAGGTGAAATCCTCTTGGCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS GCA 90 bp | ACACGGAGAGACATCCGATGCGTACAAAGACGTGGCATGAAACGCTaGAGGTTTATTGTCTCTATAAAAAGATCGTTAAGGTCGAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: TRRDIRCVQRRGMKR*RFIVSIKRSLRSSV Trigger: CACGCTCGACCTTAACGATCTTTTTATAGAGACAATAAACCTGCAGCGTTTCATGCCACGTCTTTGTACGCATCGGATGTCTCTCCGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS CCA 90 bp | TCACCTAGTAACTACACGGAGAGACATCCGATGCGTACAAAGACGTaGCATGAAACGCTGCAGGTTTATTGTCTCTATAAAAAGATCGTT | + |
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Preference number: 5 (lower is better) Translates to: SPSNYTERHPMRTKT*HETLQVYCLYKKIV Trigger: AACGATCTTTTTATAGAGACAATAAACCTGCAGCGTTTCATGCCACGTCTTTGTACGCATCGGATGTCTCTCCGTGTAGTTACTAGGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS CCA 90 bp | CTGTCCATACATTGTTTAATACAGGATGGCACACAATACCATTCCTaGTTAAATGTTTCACTTAACAAGCGCCACCCTCTACTCCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LSIHCLIQDGTQYHS*LNVSLNKRHPLLLQ Trigger: TTGGAGGAGTAGAGGGTGGCGCTTGTTAAGTGAAACATTTAACCAGGAATGGTATTGTGTGCCATCCTGTATTAAACAATGTATGGACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS CCA 72 bp | GTGTCTGGGGCGTGGAGGGCACGGCTGGAGGCTGAGTaGGGTCCACCTTCGCGTGGCCCAGGCTCTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: VSGAWRARLEAE*GPPSRGPGSSI Trigger: AATGGAAGAGCCTGGGCCACGCGAAGGTGGACCCCACTCAGCCTCCAGCCGTGCCCTCCACGCCCCAGACAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS CCA 72 bp | TCCTTCCTGCCGATCCTGCAGACCCCGGAGTCCAAATaGGACCCCGTCCACACGACCGCGGAGTCGCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SFLPILQTPESK*DPVHTTAESPP Trigger: CGGAGGCGACTCCGCGGTCGTGTGGACGGGGTCCCATTTGGACTCCGGGGTCTGCAGGATCGGCAGGAAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS CCA 72 bp | CTAACGTGTGCGGTACTAACTGTACTCACTACGCCCTaGTCACTTTATAGCACAAGTCCGAGGCAAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LTCAVLTVLTTP*SLYSTSPRQGK Trigger: CTTTCCTTGCCTCGGACTTGTGCTATAAAGTGACCAGGGCGTAGTGAGTACAGTTAGTACCGCACACGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS GCA 72 bp | GGATTTCACCTAGTAACTACACGGAGAGACATCCGATaGGTACAAAGACGTGGCATGAAACGCTGCAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: GFHLVTTRRDIR*VQRRGMKRCRF Trigger: AAACCTGCAGCGTTTCATGCCACGTCTTTGTACGCATCGGATGTCTCTCCGTGTAGTTACTAGGTGAAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS CAA 90 bp | ATCTTCTTACTCCTGGAAAACAATAAAGGTCCACTTTCAAACCATTaGGACGCACTTGCTCCTTCTAAAGGGTTAGGGAGTCCCGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: IFLLLENNKGPLSNH*DALAPSKGLGSPGR Trigger: TCTGCCGGGACTCCCTAACCCTTTAGAAGGAGCAAGTGCGTCCAAATGGTTTGAAAGTGGACCTTTATTGTTTTCCAGGAGTAAGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS CCA 72 bp | AACTACACGGAGAGACATCCGATGCGTACAAAGACGTaGCATGAAACGCTGCAGGTTTATTGTCTCTATAAA | + |
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Preference number: 6 (lower is better) Translates to: NYTERHPMRTKT*HETLQVYCLYK Trigger: TTTATAGAGACAATAAACCTGCAGCGTTTCATGCCACGTCTTTGTACGCATCGGATGTCTCTCCGTGTAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS CAA 72 bp | CTCCTGGAAAACAATAAAGGTCCACTTTCAAACCATTaGGACGCACTTGCTCCTTCTAAAGGGTTAGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LLENNKGPLSNH*DALAPSKGLGS Trigger: ACTCCCTAACCCTTTAGAAGGAGCAAGTGCGTCCAAATGGTTTGAAAGTGGACCTTTATTGTTTTCCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS GCA 72 bp | GACATCCGATGCGTACAAAGACGTGGCATGAAACGCTaGAGGTTTATTGTCTCTATAAAAAGATCGTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: DIRCVQRRGMKR*RFIVSIKRSLR Trigger: CCTTAACGATCTTTTTATAGAGACAATAAACCTGCAGCGTTTCATGCCACGTCTTTGTACGCATCGGATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS CCA 72 bp | CATTGTTTAATACAGGATGGCACACAATACCATTCCTaGTTAAATGTTTCACTTAACAAGCGCCACCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: HCLIQDGTQYHS*LNVSLNKRHPL Trigger: TAGAGGGTGGCGCTTGTTAAGTGAAACATTTAACCAGGAATGGTATTGTGTGCCATCCTGTATTAAACAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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| CDS CCA 72 bp | TTGTTCCACTCTGTCCATACATTGTTTAATACAGGATaGCACACAATACCATTCCTGGTTAAATGTTTCACT | + |
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Preference number: 6 (lower is better) Translates to: LFHSVHTLFNTG*HTIPFLVKCFT Trigger: AGTGAAACATTTAACCAGGAATGGTATTGTGTGCCATCCTGTATTAAACAATGTATGGACAGAGTGGAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606994.1 |
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