RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GOLGB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000173230

Ensembl transcript IDs: ENST00000340645.9, ENST00000393667.7, ENST00000472475.1, ENST00000472829.1, ENST00000482512.5, ENST00000489400.1, ENST00000491690.1, ENST00000494517.5, ENST00000614479.4

Found 1543 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTGCTCAGCAGCAGTCAGCTCCTGTTGCAGCAAGTCAACGACCTaGGCACGGCCCACCAAGGATTCTTCGTGTTCCTCAAGCTTCCTT +
Preference number: 1 (lower is better)
Translates to: LCSAAVSSCCSKSTT*ARPTKDSSCSSSFL
Trigger: AAGGAAGCTTGAGGAACACGAAGAATCCTTGGTGGGCCGTGCTCAGGTCGTTGACTTGCTGCAACAGGAGCTGACTGCTGCTGAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp CTTCGACAACTGTTGCTTGTAAGATCTATTAACAGTGCCTGCTCCTaGGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCAT +
Preference number: 1 (lower is better)
Translates to: LRQLLLVRSINSACS*VPQEPMIGVREESH
Trigger: ATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAGGAGCAGGCACTGTTAATAGATCTTACAAGCAACAGTTGTCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
3UTR GCA 90 bp CCTGTCACGATCATCCTGGAGGGAAGACATGCTCTTAGTAAAGGCTaGAAGCTGGGTCACAGTACTGTCCAAGTTTTCCTGAAGTTGCTG +
Preference number: 1 (lower is better)
Translates to: PVTIILEGRHALSKG*KLGHSTVQVFLKLL
Trigger: CAGCAACTTCAGGAAAACTTGGACAGTACTGTGACCCAGCTTGCAGCCTTTACTAAGAGCATGTCTTCCCTCCAGGATGATCGTGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp AACTCTACTTTCTCAGCCTCTATTTCCTTCAGCTGGGCCTTAATCTaGGCAACAGAAGTTCCGCCCTGCAGAGCACTCGCATCTTCAGAA +
Preference number: 1 (lower is better)
Translates to: NSTFSASISFSWALI*ATEVPPCRALASSE
Trigger: TTCTGAAGATGCGAGTGCTCTGCAGGGCGGAACTTCTGTTGCCCAGATTAAGGCCCAGCTGAAGGAAATAGAGGCTGAGAAAGTAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp TGCCTTACACGTTCTGCCCCCTCAAGCACTTCACTTTCCTTATTTTaGAGCTGGCTTTGCAGGCTTCTTATCAGGGTACTCTGCTCAGAA +
Preference number: 1 (lower is better)
Translates to: CLTRSAPSSTSLSLF*SWLCRLLIRVLCSE
Trigger: TTCTGAGCAGAGTACCCTGATAAGAAGCCTGCAAAGCCAGCTGCAAAATAAGGAAAGTGAAGTGCTTGAGGGGGCAGAACGTGTAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp CTCTCCCATTTCTTAGCTTCATCTATCACCCTGTCACGATCATCCTaGAGGGAAGACATGCTCTTAGTAAAGGCTGCAAGCTGGGTCACA +
Preference number: 1 (lower is better)
Translates to: LSHFLASSITLSRSS*REDMLLVKAASWVT
Trigger: TGTGACCCAGCTTGCAGCCTTTACTAAGAGCATGTCTTCCCTCCAGGATGATCGTGACAGGGTGATAGATGAAGCTAAGAAATGGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp TTCCCTTCCTCTGACTTTCGAAATTTCTCCAGCTCATTCCACAGGTaGTCTCTCTCATTCTGCAGACTGGCCATAGCCTTGGAAAAGGAC +
Preference number: 1 (lower is better)
Translates to: FPSSDFRNFSSSFHR*SLSFCRLAIALEKD
Trigger: GTCCTTTTCCAAGGCTATGGCCAGTCTGCAGAATGAGAGAGATCACCTGTGGAATGAGCTGGAGAAATTTCGAAAGTCAGAGGAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp GATGTCTCTGGGGATGCCTGTCTTTGGTATTGCACTTTGAGAGGCTaGGTCTGGGAGGAAGAAGACCTCAATTCCCTTATAAGATTCTGC +
Preference number: 1 (lower is better)
Translates to: DVSGDACLWYCTLRG*VWEEEDLNSLIRFC
Trigger: GCAGAATCTTATAAGGGAATTGAGGTCTTCTTCCTCCCAGACTCAGCCTCTCAAAGTGCAATACCAAAGACAGGCATCCCCAGAGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp AGATGTTCTAGGCCAGCAATTTGTAGTTGGCTGCTTTCCAATTTCTaGTGCAGGCTTTCGGCATGGACTTCAGCTTCATGGGATACTGTC +
Preference number: 1 (lower is better)
Translates to: RCSRPAICSWLLSNF*CRLSAWTSASWDTV
Trigger: GACAGTATCCCATGAAGCTGAAGTCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAGCAGCCAACTACAAATTGCTGGCCTAGAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp ATTGGAAGAAAGAAGTGTTTCCATACACTCTTTAGCTGTATCTCCTaGAGGGTGCACCTCTGCCCTAAGCCGGTCATTCTCTTCTTCCAG +
Preference number: 1 (lower is better)
Translates to: IGRKKCFHTLFSCIS*RVHLCPKPVILFFQ
Trigger: CTGGAAGAAGAGAATGACCGGCTTAGGGCAGAGGTGCACCCTGCAGGAGATACAGCTAAAGAGTGTATGGAAACACTTCTTTCTTCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp ACTTTCAATTCTAACTCTACTTTCTCAGCCTCTATTTCCTTCAGCTaGGCCTTAATCTGGGCAACAGAAGTTCCGCCCTGCAGAGCACTC +
Preference number: 1 (lower is better)
Translates to: TFNSNSTFSASISFS*ALIWATEVPPCRAL
Trigger: GAGTGCTCTGCAGGGCGGAACTTCTGTTGCCCAGATTAAGGCCCAGCTGAAGGAAATAGAGGCTGAGAAAGTAGAGTTAGAATTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp CCCTCACCCTCCATCTGTTTCATTTCTTTCTGGTCAAGGACCTCATaGTCTGCTTCCTCAGCCCTTTTTCCCTGGAGCTGTAATTTAAGA +
Preference number: 1 (lower is better)
Translates to: PSPSICFISFWSRTS*SASSALFPWSCNLR
Trigger: TCTTAAATTACAGCTCCAGGGAAAAAGGGCTGAGGAAGCAGATCATGAGGTCCTTGACCAGAAAGAAATGAAACAGATGGAGGGTGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp GTTCTTCTAAACCTGGAGTGGAAGAACACGATTCCTGCTGGTCTGTaGTTGGGAGTTTTCCGTCTATGGATTCCCTTACTTGAATCTGGA +
Preference number: 1 (lower is better)
Translates to: VLLNLEWKNTIPAGL*LGVFRLWIPLLESG
Trigger: TCCAGATTCAAGTAAGGGAATCCATAGACGGAAAACTCCCAAGCACAGACCAGCAGGAATCGTGTTCTTCCACTCCAGGTTTAGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp TGTTCTAGGCCAGCAATTTGTAGTTGGCTGCTTTCCAATTTCTGCTaGAGGCTTTCGGCATGGACTTCAGCTTCATGGGATACTGTCTTT +
Preference number: 1 (lower is better)
Translates to: CSRPAICSWLLSNFC*RLSAWTSASWDTVF
Trigger: AAAGACAGTATCCCATGAAGCTGAAGTCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAGCAGCCAACTACAAATTGCTGGCCTAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp ACCGATTCTGAACATGTAGGTCTTGTGCTCATACTCAGAGAGTCTTaGTCTTCAGTCTCACCTGGTATAGACTGTGTTCCCTCTTCAGTG +
Preference number: 1 (lower is better)
Translates to: TDSEHVGLVLILRES*SSVSPGIDCVPSSV
Trigger: CACTGAAGAGGGAACACAGTCTATACCAGGTGAGACTGAAGAGCAAGACTCTCTGAGTATGAGCACAAGACCTACATGTTCAGAATCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp GCTTTCACCACCCTATTCTGCAAGAGACCTAAATCAGATGTCCTATaGGGTGACATGTTCATTTCCCTGAACTCTGTTTATGGCAGAGCC +
Preference number: 1 (lower is better)
Translates to: AFTTLFCKRPKSDVL*GDMFISLNSVYGRA
Trigger: GGCTCTGCCATAAACAGAGTTCAGGGAAATGAACATGTCACCTCATAGGACATCTGATTTAGGTCTCTTGCAGAATAGGGTGGTGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR TCA 90 bp TGCTGGTCTGTGCTTGGGAGTTTTCCGTCTATGGATTCCCTTACTTaGATCTGGAGTTGCCTTAGCTGGTCTCCAATATTCTCATTTTCC +
Preference number: 1 (lower is better)
Translates to: CWSVLGSFPSMDSLT*IWSCLSWSPIFSFS
Trigger: GGAAAATGAGAATATTGGAGACCAGCTAAGGCAACTCCAGATTCAAGTAAGGGAATCCATAGACGGAAAACTCCCAAGCACAGACCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp TATTTTGAGCAGAAACTTGGCTTTCCACATCTGCCAGAGACTTGGTaGGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGA +
Preference number: 1 (lower is better)
Translates to: YFEQKLGFPHLPETW*DVQWYLWPKTIPLG
Trigger: TCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCTCTGGCAGATGTGGAAAGCCAAGTTTCTGCTCAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp GTTGCAATTCTCTTAGATGTTCTAGGCCAGCAATTTGTAGTTGGCTaGTTTCCAATTTCTGCTGCAGGCTTTCGGCATGGACTTCAGCTT +
Preference number: 1 (lower is better)
Translates to: VAILLDVLGQQFVVG*FPISAAGFRHGLQL
Trigger: AAGCTGAAGTCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAGCAGCCAACTACAAATTGCTGGCCTAGAACATCTAAGAGAATTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp TTAAAAGGTCACCATAGTGCTGCTGGTTCTCACGAAGACTCTGACTaGTATCGCAGAGCTGAATGGAAAGGGTGTTTTTCTCTTCCAGTA +
Preference number: 1 (lower is better)
Translates to: LKGHHSAAGSHEDSD*YRRAEWKGCFSLPV
Trigger: TACTGGAAGAGAAAAACACCCTTTCCATTCAGCTCTGCGATACCAGTCAGAGTCTTCGTGAGAACCAGCAGCACTATGGTGACCTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp TGGGACAGCAGGTTTTCCAGCTCTTTAATTTCTTTATCATGTTGCTaGCGCAGTTCAGCAATAGCTACTTGGATTGCCTCTTCCTTGCCA +
Preference number: 1 (lower is better)
Translates to: WDSRFSSSLISLSCC*RSSAIATWIASSLP
Trigger: TGGCAAGGAAGAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATTAAAGAGCTGGAAAACCTGCTGTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp GTCATGGGCAGTTTGGCTTTCATAATCAAGTCTTCTTTGCCTTTCTaGTTCTGCAAGGTTCATTTCCAGTTGCTTTACCTGAGCCCTCAA +
Preference number: 1 (lower is better)
Translates to: VMGSLAFIIKSSLPF*FCKVHFQLLYLSPQ
Trigger: TTGAGGGCTCAGGTAAAGCAACTGGAAATGAACCTTGCAGAAGCAGAAAGGCAAAGAAGACTTGATTATGAAAGCCAAACTGCCCATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp TTGAATAAAGGTTCTTCTAAACCTGGAGTGGAAGAACACGATTCCTaGTGGTCTGTGCTTGGGAGTTTTCCGTCTATGGATTCCCTTACT +
Preference number: 1 (lower is better)
Translates to: LNKGSSKPGVEEHDS*WSVLGSFPSMDSLT
Trigger: AGTAAGGGAATCCATAGACGGAAAACTCCCAAGCACAGACCAGCAGGAATCGTGTTCTTCCACTCCAGGTTTAGAAGAACCTTTATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp AATATTCTCCTCAGTGACTGCCTGTGTGCCCTCATTATAAACATCTaGGAAAGAAGTCTGAGATGCTGTTTCATGTTGTTGCAAGGGCAG +
Preference number: 1 (lower is better)
Translates to: NILLSDCLCALIINI*ERSLRCCFMLLQGQ
Trigger: CTGCCCTTGCAACAACATGAAACAGCATCTCAGACTTCTTTCCCAGATGTTTATAATGAGGGCACACAGGCAGTCACTGAGGAGAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp ATTTGTAGTTGGCTGCTTTCCAATTTCTGCTGCAGGCTTTCGGCATaGACTTCAGCTTCATGGGATACTGTCTTTAGACTCTCGATTTCT +
Preference number: 1 (lower is better)
Translates to: ICSWLLSNFCCRLSA*TSASWDTVFRLSIS
Trigger: AGAAATCGAGAGTCTAAAGACAGTATCCCATGAAGCTGAAGTCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAGCAGCCAACTACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp TTAGGTTGCAATTCTCTTAGATGTTCTAGGCCAGCAATTTGTAGTTaGCTGCTTTCCAATTTCTGCTGCAGGCTTTCGGCATGGACTTCA +
Preference number: 1 (lower is better)
Translates to: LGCNSLRCSRPAICS*LLSNFCCRLSAWTS
Trigger: TGAAGTCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAGCAGCCAACTACAAATTGCTGGCCTAGAACATCTAAGAGAATTGCAACCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp GTCTCACCTGGTATAGACTGTGTTCCCTCTTCAGTGACATTCGTTTaGTTATCATGTTTCTCGGTGGCCTCTAGGTTAGCTTGTTTAGAT +
Preference number: 1 (lower is better)
Translates to: VSPGIDCVPSSVTFV*LSCFSVASRLACLD
Trigger: ATCTAAACAAGCTAACCTAGAGGCCACCGAGAAACATGATAACCAAACGAATGTCACTGAAGAGGGAACACAGTCTATACCAGGTGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp AGTTGGACTCTAAAACAGGTTGAGTGTGATGCTGTTCTGTGGCTTTaGATAAAGGTTCTTCTAAACCTGGAGTGGAAGAACACGATTCCT +
Preference number: 1 (lower is better)
Translates to: SWTLKQVECDAVLWL*IKVLLNLEWKNTIP
Trigger: AGGAATCGTGTTCTTCCACTCCAGGTTTAGAAGAACCTTTATTCAAAGCCACAGAACAGCATCACACTCAACCTGTTTTAGAGTCCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp TTTTTCAACTTGAGATTGTCTGCTAGGACCCTTGCTGCTTCACTTTaGGTGTCATCTAGCAGGACTTTGAAGCTAGCTAATTCTGCTTGT +
Preference number: 1 (lower is better)
Translates to: FFNLRLSARTLAASL*VSSSRTLKLANSAC
Trigger: ACAAGCAGAATTAGCTAGCTTCAAAGTCCTGCTAGATGACACTCAAAGTGAAGCAGCAAGGGTCCTAGCAGACAATCTCAAGTTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp AATTGCTCATCTTTGGATAGGAGCTGTTGGTTAAGTTTCTCAAGGTaGGACAAGCTATTCTCCTCAGTGGAGTTCATTGAAAAGGCGGTT +
Preference number: 1 (lower is better)
Translates to: NCSSLDRSCWLSFSR*DKLFSSVEFIEKAV
Trigger: AACCGCCTTTTCAATGAACTCCACTGAGGAGAATAGCTTGTCTCACCTTGAGAAACTTAACCAACAGCTCCTATCCAAAGATGAGCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp CACCTGAGAGAGAAGCTGGTCTCTTTCTTCAGACAAAGCAGTGAATaGACTGCTGTTGTTGTCAGCATTTTTCTTAAACTCCTCAATCAA +
Preference number: 1 (lower is better)
Translates to: HLREKLVSFFRQSSE*TAVVVSIFLKLLNQ
Trigger: TTGATTGAGGAGTTTAAGAAAAATGCTGACAACAACAGCAGTGCATTCACTGCTTTGTCTGAAGAAAGAGACCAGCTTCTCTCTCAGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp CTTTCCAATTTCTGCTGCAGGCTTTCGGCATGGACTTCAGCTTCATaGGATACTGTCTTTAGACTCTCGATTTCTAAACCCTGTTTATTT +
Preference number: 1 (lower is better)
Translates to: LSNFCCRLSAWTSAS*DTVFRLSISKPCLF
Trigger: AAATAAACAGGGTTTAGAAATCGAGAGTCTAAAGACAGTATCCCATGAAGCTGAAGTCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp TCTTTGAGACTCTTAAGTTCTGATTCCAACTTAGCTAATTCATTCTaGGAACTGTGGTATAGGTGGCGTGTCTCTTCTAGCTGGGACAAA +
Preference number: 1 (lower is better)
Translates to: SLRLLSSDSNLANSF*ELWYRWRVSSSWDK
Trigger: TTTGTCCCAGCTAGAAGAGACACGCCACCTATACCACAGTTCTCAGAATGAATTAGCTAAGTTGGAATCAGAACTTAAGAGTCTCAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp TCATCTTTCAAGTTGGCTAATTCTTCTTCCAATCTACTGACTCTTTaGAGAAGCTCCTTTCTGTTAATAAGAGCTGCCTGGAGCTTTCTC +
Preference number: 1 (lower is better)
Translates to: SSFKLANSSSNLLTL*RSSFLLIRAAWSFL
Trigger: GAGAAAGCTCCAGGCAGCTCTTATTAACAGAAAGGAGCTTCTGCAAAGAGTCAGTAGATTGGAAGAAGAATTAGCCAACTTGAAAGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp AGTTCCACCTGTAGCTGCTTTATCCTCTCATCATGCTCTTTGGCTTaGATTTCTAGCTGTGTATGCAGAGCCTTAATTAAATCTTCTTGT +
Preference number: 1 (lower is better)
Translates to: SSTCSCFILSSCSLA*ISSCVCRALIKSSC
Trigger: ACAAGAAGATTTAATTAAGGCTCTGCATACACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGAGGATAAAGCAGCTACAGGTGGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp TTCATTTCACAAAGTTCCACCTGTAGCTGCTTTATCCTCTCATCATaGTCTTTGGCTTGCATTTCTAGCTGTGTATGCAGAGCCTTAATT +
Preference number: 1 (lower is better)
Translates to: FISQSSTCSCFILSS*SLACISSCVCRALI
Trigger: AATTAAGGCTCTGCATACACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGAGGATAAAGCAGCTACAGGTGGAACTTTGTGAAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp ATCTCTTCTGGTTTTTGCTTCATTTCACAAAGTTCCACCTGTAGCTaGTTTATCCTCTCATCATGCTCTTTGGCTTGCATTTCTAGCTGT +
Preference number: 1 (lower is better)
Translates to: ISSGFCFISQSSTCS*FILSSCSLACISSC
Trigger: ACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGAGGATAAAGCAGCTACAGGTGGAACTTTGTGAAATGAAGCAAAAACCAGAAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp ACTTCAATTTTCACATCTTTAGATTTGGCTTCTATGCTGAGACTATaGATCTGTTCAGTGAGCAGGTTGTCATGGGCAGTTTGGCTTTCA +
Preference number: 1 (lower is better)
Translates to: TSIFTSLDLASMLRL*ICSVSRLSWAVWLS
Trigger: TGAAAGCCAAACTGCCCATGACAACCTGCTCACTGAACAGATCCATAGTCTCAGCATAGAAGCCAAATCTAAAGATGTGAAAATTGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp TCTACTCCAGCATCATTTAAAGATATTTCCTCAGATGTTCTACTTTaGTGTTCAGTGCTCGCCTGTTCTTTTTCAACTGCTGGAAGACTG +
Preference number: 1 (lower is better)
Translates to: STPASFKDISSDVLL*CSVLACSFSTAGRL
Trigger: CAGTCTTCCAGCAGTTGAAAAAGAACAGGCGAGCACTGAACATCAAAGTAGAACATCTGAGGAAATATCTTTAAATGATGCTGGAGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp TTCCCTTATAAGATTCTGCAGATGACTGAGCTGCTGATCTTTATCTaGGATAGCCATAAGGTACTGTTCCTTCATTCTCCTCTCATGTAT +
Preference number: 1 (lower is better)
Translates to: FPYKILQMTELLIFI*DSHKVLFLHSPLMY
Trigger: ATACATGAGAGGAGAATGAAGGAACAGTACCTTATGGCTATCTCAGATAAAGATCAGCAGCTCAGTCATCTGCAGAATCTTATAAGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp CCTCGTATTTCTTCTTTAAGCTTATTATTCTCTGCAGCAGCCTCTTaGATGAGTTGGTCTTTTTCCAAGATTATAGAGAGATGTCGCTCT +
Preference number: 1 (lower is better)
Translates to: PRISSLSLLFSAAAS*MSWSFSKIIERCRS
Trigger: AGAGCGACATCTCTCTATAATCTTGGAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGAGAATAATAAGCTTAAAGAAGAAATACGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp ACTTCAAGAAGCTGCTTTTGTTGGCTGTCCTTTATTGTTATCACTTaGTTCAGGTCTTCTCTATATTGGATCAGTTCTGCATCTAGCTTG +
Preference number: 1 (lower is better)
Translates to: TSRSCFCWLSFIVIT*FRSSLYWISSASSL
Trigger: CAAGCTAGATGCAGAACTGATCCAATATAGAGAAGACCTGAACCAAGTGATAACAATAAAGGACAGCCAACAAAAGCAGCTTCTTGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp AATTCTAGAGCTTTAACAGTTCTCTCCAGAGCACTAATTTTCTCTTaGTACCTGATGCAGTCCTTCTGTAGCTGCTTTACTTCTTGTTGT +
Preference number: 1 (lower is better)
Translates to: NSRALTVLSRALIFS*YLMQSFCSCFTSCC
Trigger: ACAACAAGAAGTAAAGCAGCTACAGAAGGACTGCATCAGGTATCAAGAGAAAATTAGTGCTCTGGAGAGAACTGTTAAAGCTCTAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp CATCATTTAAAGATATTTCCTCAGATGTTCTACTTTGATGTTCAGTaGTCGCCTGTTCTTTTTCAACTGCTGGAAGACTGCTCTCTTCAT +
Preference number: 1 (lower is better)
Translates to: HHLKIFPQMFYFDVQ*SPVLFQLLEDCSLH
Trigger: ATGAAGAGAGCAGTCTTCCAGCAGTTGAAAAAGAACAGGCGAGCACTGAACATCAAAGTAGAACATCTGAGGAAATATCTTTAAATGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 90 bp TCTTCCTTTTTGCTTATGAGTTTTTGCAGTTCATCCAGTTTAGGTTaGAATTCTCTTAGATGTTCTAGGCCAGCAATTTGTAGTTGGCTG +
Preference number: 1 (lower is better)
Translates to: SSFLLMSFCSSSSLG*NSLRCSRPAICSWL
Trigger: CAGCCAACTACAAATTGCTGGCCTAGAACATCTAAGAGAATTGCAACCTAAACTGGATGAACTGCAAAAACTCATAAGCAAAAAGGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 90 bp AACTTCAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTaGAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATCAG +
Preference number: 1 (lower is better)
Translates to: NFRLLGLLKPSSWLG*KTFLSIFYRTTKDQ
Trigger: CTGATCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTGAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR CCA 90 bp ACTGAACTTCAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTaGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGA +
Preference number: 1 (lower is better)
Translates to: TELQIIRFIETILLA*LKDIPQYLLQDHKR
Trigger: TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTGAAGTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR GCA 90 bp ACTGCTGGAAGACTGCTCTCTTCATTTGGCATTAAGGGAAAATCTTaGCCTGTATCTTCAAGAAATACTTTCATTTTAATTGGAGCTATT +
Preference number: 1 (lower is better)
Translates to: TAGRLLSSFGIKGKS*PVSSRNTFILIGAI
Trigger: AATAGCTCCAATTAAAATGAAAGTATTTCTTGAAGATACAGGGCAAGATTTTCCCTTAATGCCAAATGAAGAGAGCAGTCTTCCAGCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp TCACTTGCATCCGTGTTACTTGTGATTAACTTCTGGATAATTGCTTaGTTTTCACTGATTTCTGCTTGGAGCAAATCTATTTGGTTTGTT +
Preference number: 1 (lower is better)
Translates to: SLASVLLVINFWIIA*FSLISAWSKSIWFV
Trigger: AACAAACCAAATAGATTTGCTCCAAGCAGAAATCAGTGAAAACCAAGCAATTATCCAGAAGTTAATCACAAGTAACACGGATGCAAGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 90 bp CCTAAAGTACCTTCTTCTTGCAAGGCTGTTACTTGTCTTGTTAGCTaGGATATAGATACTTTCAAACTCTCAATCTCTTTAGATAAATCT +
Preference number: 1 (lower is better)
Translates to: PKVPSSCKAVTCLVS*DIDTFKLSISLDKS
Trigger: AGATTTATCTAAAGAGATTGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCAAGAAGAAGGTACTTTAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACACCACCAATTGCTCTaGATAAGCCAGGCGCTCCTG +
Preference number: 2 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQHHQLL*ISQALL
Trigger: CAGGAGCGCCTGGCTTATGCAGAGCAATTGGTGGTG...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAATGCAGGCACTTTCCGTaGAGAGTTGGAGAGAAGACC +
Preference number: 2 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQCRHFP*RVGEKT
Trigger: GGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCA...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGCTGTGCAGGTTGTTCTaGCTGTGCCTGAGTAAGCTG +
Preference number: 2 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLLCRLF*LCLSKL
Trigger: CAGCTTACTCAGGCACAGGCAGAACAACCTGCACAG...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGCTGCTTTCCAATTTCTaGTGCAGGCTTTCGGCATGG +
Preference number: 2 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLLLSNF*CRLSAW
Trigger: CCATGCCGAAAGCCTGCAGCAGAAATTGGAAAGCAG...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGGATCCTTCTCCTCGATaGTTTGTTGGAGGGTTTCCA +
Preference number: 2 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLDPSPR*FVGGFP
Trigger: TGGAAACCCTCCAACAAACCATCGAGGAGAAGGATC...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTCAGAAAAGCTTTGCTaGGGTTCCCTTAGTTCCTCA +
Preference number: 2 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLSEKLC*GSLSSS
Trigger: TGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGA...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
3UTR-3UTR CCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTCTATTTCCTTCAGCTaGGCCTTAATCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLSISFS*ALIWAT
Trigger: TGTTGCCCAGATTAAGGCCCAGCTGAAGGAAATAGA...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGGAGAATTCCAAGTTTTaGGGGGAGTGGTCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPENSKF*GEWSKE
Trigger: CTCTTTGGACCACTCCCCTCAAAACTTGGAATTCTC...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR-3UTR TCA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTGGGCTGGTGGAAGGCTaGGCTGCAGACCTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSGLVEG*AADLCF
Trigger: GAAGCAGAGGTCTGCAGCTCAGCCTTCCACCAGCCC...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTGCAGGCACTTTCCGTaGAGAGTTGGAGAGAAGACC +
Preference number: 2 (lower is better)
Translates to: QLKPLGSSFSFHHPILQECRHFP*RVGEKT
Trigger: GGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR TCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTCCTCTTGGCTTGGCTaGAAGACATTCCTCAGTATC +
Preference number: 2 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLSSWLG*KTFLSI
Trigger: GATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR TCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTCTTTCTGCTGCAGTTaGACATCCTTCTGTCTAATA +
Preference number: 2 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLSFCCS*TSFCLI
Trigger: TATTAGACAGAAGGATGTTCAACTGCAGCAGAAAGA...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGACCATCCTCTTGGCTTaGCTGAAAGACATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLTILLA*LKDIPQ
Trigger: CTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGT...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR CCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCCTGAACTCTGTTTATaGCAGAGCCACCTTCCCCCT +
Preference number: 2 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEPELCL*QSHLPP
Trigger: AGGGGGAAGGTGGCTCTGCCATAAACAGAGTTCAGG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR TCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGAGAATTCCAAGTTTTaGGGGGAGTGGTCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWENSKF*GEWSKE
Trigger: CTCTTTGGACCACTCCCCTCAAAACTTGGAATTCTC...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR TCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCCTGCCTGTGTCTGGCTaGGCTGGGCTTGTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: ERRASLSLFKSPCSFNCALPVSG*AGLVKC
Trigger: GCACTTTACAAGCCCAGCTCAGCCAGACACAGGCAG...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGATCTGTAAGTATTGCTaGTGCAGATTCTTCAATTCC +
Preference number: 2 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLICKYC*CRFFNS
Trigger: GGAATTGAAGAATCTGCAGCAGCAATACTTACAGAT...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGAGAAGACCTGTAAATaGGAAGACTGTTCCACTGGA +
Preference number: 2 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAEKTCK*EDCSTG
Trigger: TCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR CCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTCTTTTTCAACTGCTaGAAGACTGCTCTCTTCATT +
Preference number: 2 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLFFFNC*KTALFI
Trigger: AATGAAGAGAGCAGTCTTCCAGCAGTTGAAAAAGAA...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp ATGCCTTACACGTTCTGCCCCCTCAAGCACTTCACTTTCCTTATTTaGCAGCTGGCTTTGCAGGCTTCTTATCAGGGTACTCTGCTCAGA +
Preference number: 2 (lower is better)
Translates to: MPYTFCPLKHFTFLI*QLALQASYQGTLLR
Trigger: TCTGAGCAGAGTACCCTGATAAGAAGCCTGCAAAGCCAGCTGCAAAATAAGGAAAGTGAAGTGCTTGAGGGGGCAGAACGTGTAAGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTCCTCTTGGCTTGGCTaGAAGACATTCCTCAGTATC +
Preference number: 2 (lower is better)
Translates to: QLKPLGSSFSFHHPILQESSWLG*KTFLSI
Trigger: GATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR GCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCCTCAACTGTGCAGCTTaGTCTGCCTGTGTCTGGCTG +
Preference number: 2 (lower is better)
Translates to: ERRASLSLFKSPCSFNCALNCAA*SACVWL
Trigger: CAGCCAGACACAGGCAGAGCAAGCTGCACAGTTGAG...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTGCAGGCACTTTCCGTaGAGAGTTGGAGAGAAGACC +
Preference number: 2 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKCRHFP*RVGEKT
Trigger: GGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR-3UTR TCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTGCAGGCACTTTCCGTaGAGAGTTGGAGAGAAGACC +
Preference number: 2 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFCRHFP*RVGEKT
Trigger: GGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR TCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCGAGCCACCTTCCCCCTaGAACAGGAGAAAATACAGG +
Preference number: 2 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFEPPSP*NRRKYR
Trigger: CCTGTATTTTCTCCTGTTTCAGGGGGAAGGTGGCTC...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCAGATGTCCTATGAGGTaGCATGTTCATTTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSRCPMR*HVHFPE
Trigger: TTCAGGGAAATGAACATGTCACCTCATAGGACATCT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR GCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTTCACCACCCTATTCTaGAAGAGACCTAAATCAGAT +
Preference number: 2 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLFTTLF*KRPKSD
Trigger: ATCTGATTTAGGTCTCTTGCAGAATAGGGTGGTGAA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR GCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCTTTAGCTGTATCTCCTaGAGGGTGCACCTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: ERRASLSLFKSPCSFNCAFSCIS*RVHLCP
Trigger: AGGGCAGAGGTGCACCCTGCAGGAGATACAGCTAAA...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp CAAGTTCCTTCTGTGAAAGAGCCTGGGACAGTTCTTCCACTTTACTaGAGATATGCCTTACACGTTCTGCCCCCTCAAGCACTTCACTTT +
Preference number: 2 (lower is better)
Translates to: QVPSVKEPGTVLPLY*RYALHVLPPQALHF
Trigger: AAAGTGAAGTGCTTGAGGGGGCAGAACGTGTAAGGCATATCTCAAGTAAAGTGGAAGAACTGTCCCAGGCTCTTTCACAGAAGGAACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp CTTCTAAACCTGGAGTGGAAGAACACGATTCCTGCTGGTCTGTGCTaGGGAGTTTTCCGTCTATGGATTCCCTTACTTGAATCTGGAGTT +
Preference number: 2 (lower is better)
Translates to: LLNLEWKNTIPAGLC*GVFRLWIPLLESGV
Trigger: AACTCCAGATTCAAGTAAGGGAATCCATAGACGGAAAACTCCCAAGCACAGACCAGCAGGAATCGTGTTCTTCCACTCCAGGTTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGAGATGTCCTATGAGGTaGCATGTTCATTTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: STSRGQELQCGVRPVRLLRCPMR*HVHFPE
Trigger: TTCAGGGAAATGAACATGTCACCTCATAGGACATCT...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCACCTTAGTATACATGTaGTCAAGGGCAAAAGCAAAG +
Preference number: 2 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSTLVYM*SRAKAK
Trigger: CTTTGCTTTTGCCCTTGATCACATGTATACTAAGGT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR TCA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGATGGATTCCCTTACTTaGATCTGGAGTTGCCTTAGC +
Preference number: 2 (lower is better)
Translates to: RLGETFNGTSGQRQFLLEMDSLT*IWSCLS
Trigger: GCTAAGGCAACTCCAGATTCAAGTAAGGGAATCCAT...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCTTCTCTCGGACCACCTaGTGCATGGAACTCAACTGT +
Preference number: 2 (lower is better)
Translates to: ERRASLSLFKSPCSFNCAFSRTT*CMELNC
Trigger: ACAGTTGAGTTCCATGCAGCAGGTGGTCCGAGAGAA...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCCTGCTGGTCTGTGCTTaGGAGTTTTCCGTCTATGGA +
Preference number: 2 (lower is better)
Translates to: ERRASLSLFKSPCSFNCALLVCA*EFSVYG
Trigger: TCCATAGACGGAAAACTCCCAAGCACAGACCAGCAG...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp TCTAGAACATCTTGTCCACTTTCCTCAGCAGAAGAGCTCCTCTTGTaGGCAATATCAACAATGCTGATCTCACTGACTTCTCTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: SRTSCPLSSAEELLL*AISTMLISLTSLSA
Trigger: GGCAGACAGAGAAGTCAGTGAGATCAGCATTGTTGATATTGCCAACAAGAGGAGCTCTTCTGCTGAGGAAAGTGGACAAGATGTTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGAAATCAGATGTCCTATaGGGTGACATGTTCATTTCC +
Preference number: 2 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEKSDVL*GDMFIS
Trigger: GGAAATGAACATGTCACCTCATAGGACATCTGATTT...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR GCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTTCACCACCCTATTCTaGAAGAGACCTAAATCAGAT +
Preference number: 2 (lower is better)
Translates to: STSRGQELQCGVRPVRLLFTTLF*KRPKSD
Trigger: ATCTGATTTAGGTCTCTTGCAGAATAGGGTGGTGAA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR GCA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGCAACTGCTGGAAGACTaGTCTCTTCATTTGGCATTA +
Preference number: 2 (lower is better)
Translates to: RLGETFNGTSGQRQFLLEQLLED*SLHLAL
Trigger: TAATGCCAAATGAAGAGAGCAGTCTTCCAGCAGTTG...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCACCATCCTCTTGGCTTaGCTGAAAGACATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVITILLA*LKDIPQ
Trigger: CTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGT...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR CCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCAGACTCTAGTTCAGCCTaGGCTTGGCCTGCTTGCTCA +
Preference number: 2 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSDSSSA*AWPACS
Trigger: TGAGCAAGCAGGCCAAGCCCAGGCTGAACTAGAGTC...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp TCTGGGCTGACTGAACTGCTTGCTCATTCTTATCTTGGAGAAGCTTaGAATTTTGATCCTTTAGAGCATCACAGGCAGACTGCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: SGLTELLAHSYLGEA*NFDPLEHHRQTAAL
Trigger: AAGAGCTGCAGTCTGCCTGTGATGCTCTAAAGGATCAAAATTCAAAGCTTCTCCAAGATAAGAATGAGCAAGCAGTTCAGTCAGCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp GAGCAGGTTGTCATGGGCAGTTTGGCTTTCATAATCAAGTCTTCTTaGCCTTTCTGCTTCTGCAAGGTTCATTTCCAGTTGCTTTACCTG +
Preference number: 2 (lower is better)
Translates to: EQVVMGSLAFIIKSS*PFCFCKVHFQLLYL
Trigger: CAGGTAAAGCAACTGGAAATGAACCTTGCAGAAGCAGAAAGGCAAAGAAGACTTGATTATGAAAGCCAAACTGCCCATGACAACCTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp CTCCTGGGACAGCAGGTTTTCCAGCTCTTTAATTTCTTTATCATGTaGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: LLGQQVFQLFNFFIM*LTQFSNSYLDCLFL
Trigger: AAGGAAGAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATTAAAGAGCTGGAAAACCTGCTGTCCCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp CTCTTCCAGCTGTTGATAGTCACCCACTATGCGGTCTCGATCATTTaGGAGAGAAGACATGGATTTAACAAAGGAATCCAACTGTGCCTT +
Preference number: 2 (lower is better)
Translates to: LFQLLIVTHYAVSII*ERRHGFNKGIQLCL
Trigger: AAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCTTCTCTCCAAAATGATCGAGACCGCATAGTGGGTGACTATCAACAGCTGGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGCTGTTCCACTGGAATTaGTGTTCTGATGTTAGAGGT +
Preference number: 2 (lower is better)
Translates to: VFAGTFREELERRPVNGKLFHWN*CSDVRG
Trigger: ACCTCTAACATCAGAACATCAATTCCAGTGGAACAG...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR-3UTR TCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCAGTCAGACTCCTGGCTaGGAGTCAATGCCTAATATT +
Preference number: 2 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFSQTPG*ESMPNI
Trigger: AATATTAGGCATTGACTCTCAGCCAGGAGTCTGACT...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR TCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCAGGAAAGTTGCTCCTCTaGCTGAGGTTCTGTAGGCAG +
Preference number: 2 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSGKLLL*LRFCRQ
Trigger: CTGCCTACAGAACCTCAGTCAGAGGAGCAACTTTCC...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCATCTGCTGTAACTGCTaGGAGAGAATCTGGTTTCTC +
Preference number: 2 (lower is better)
Translates to: ERRASLSLFKSPCSFNCAICCNC*ERIWFL
Trigger: GAGAAACCAGATTCTCTCTCAGCAGTTACAGCAGAT...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGATTTCTTGTGCTTTATaGAAGTTTAGCTCGAGCTCC +
Preference number: 2 (lower is better)
Translates to: RLGETFNGTSGQRQFLLEISCAL*KFSSSS
Trigger: GGAGCTCGAGCTAAACTTTCATAAAGCACAAGAAAT...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGTTGCTTGGTTTTCACTaGTTTCTGCTTGGAGCAAAT +
Preference number: 2 (lower is better)
Translates to: RLGETFNGTSGQRQFLLELLGFH*FLLGAN
Trigger: ATTTGCTCCAAGCAGAAATCAGTGAAAACCAAGCAA...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp AGTGACTGCCTGTGTGCCCTCATTATAAACATCTGGGAAAGAAGTCTGAGATGCCTTCTCTTCCATTTCTaGTTTGTGCTTCTGCTCCAA +
Preference number: 2 (lower is better)
Translates to: SDCLCALIINIWERSLRCLLFHF*FVLLLQ
Trigger: TTGGAGCAGAAGCACAAAGCAGAAATGGAAGAGAAG...GCATCTCAGACTTCTTTCCCAGATGTTTATAATGAGGGCACACAGGCAGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCGCATCACAGGCAGACTaGAGCTCTTGTCCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLASQAD*SSCPVF
Trigger: AAAGACTGGACAAGAGCTGCAGTCTGCCTGTGATGC...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCAACAGAAGTTCCGCCCTaGAGAGCACTCGCATCTTCA +
Preference number: 2 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSTEVPP*RALASS
Trigger: TGAAGATGCGAGTGCTCTGCAGGGCGGAACTTCTGT...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGGAGAAGACCTGTAAATaGGAAGACTGTTCCACTGGA +
Preference number: 2 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKEKTCK*EDCSTG
Trigger: TCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTC...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAGAGAAGACCTGTAAATaGGAAGACTGTTCCACTGGA +
Preference number: 2 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPEKTCK*EDCSTG
Trigger: TCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTC...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR CAA 90 bp AAAGGCTGCAAGCTGGGTCACAGTACTGTCCAAGTTTTCCTGAAGTaGCTGAACTTCCTTGTCTTTCTTGTTCAAAGTAACCTGAATCTC +
Preference number: 2 (lower is better)
Translates to: KGCKLGHSTVQVFLK*LNFLVFLVQSNLNL
Trigger: GAGATTCAGGTTACTTTGAACAAGAAAGACAAGGAAGTTCAGCAACTTCAGGAAAACTTGGACAGTACTGTGACCCAGCTTGCAGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp TTGGTCTTTTTCCAAGATTATAGAGAGATGTCGCTCTTCCAGCTGTaGATAGTCACCCACTATGCGGTCTCGATCATTTTGGAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: LVFFQDYREMSLFQL*IVTHYAVSIILERR
Trigger: TCTTCTCTCCAAAATGATCGAGACCGCATAGTGGGTGACTATCAACAGCTGGAAGAGCGACATCTCTCTATAATCTTGGAAAAAGACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCGAGAATTCCAAGTTTTaGGGGGAGTGGTCCAAAGAG +
Preference number: 2 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLENSKF*GEWSKE
Trigger: CTCTTTGGACCACTCCCCTCAAAACTTGGAATTCTC...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACTGTTCCACTGGAATTaGTGTTCTGATGTTAGAGGT +
Preference number: 2 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPLFHWN*CSDVRG
Trigger: ACCTCTAACATCAGAACATCAATTCCAGTGGAACAG...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR-3UTR TCA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCTCCTCTTGGCTTGGCTaGAAGACATTCCTCAGTATC +
Preference number: 2 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLSSWLG*KTFLSI
Trigger: GATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGA...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTTGGTCAAGGACCTCATaGTCTGCTTCCTCAGCCCTT +
Preference number: 2 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLWSRTS*SASSAL
Trigger: AAGGGCTGAGGAAGCAGATCATGAGGTCCTTGACCA...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCATATGGATCTGTTCAGTaGGCAGGTTGTCATGGGCAG +
Preference number: 2 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSYGSVQ*AGCHGQ
Trigger: CTGCCCATGACAACCTGCTCACTGAACAGATCCATA...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGGTAGAACTCTTGTCATaGTTGGAAAGTTGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLVELLS*LESCSS
Trigger: AGAGGAGCAACTTTCCAAGCATGACAAGAGTTCTAC...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGGAAAGAAGTCTGAGATaGTGTTTCATGTTGTTGCAA +
Preference number: 2 (lower is better)
Translates to: RLGETFNGTSGQRQFLLEERSLR*CFMLLQ
Trigger: TTGCAACAACATGAAACAGCATCTCAGACTTCTTTC...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp TTCCCTCACCCTCCATCTGTTTCATTTCTTTCTGGTCAAGGACCTCATGATCTGTCTACCACTCTCTTCTaGAAAGAAGCAATATTCTCC +
Preference number: 2 (lower is better)
Translates to: FPHPPSVSFLSGQGPHDLSTTLF*KEAIFS
Trigger: GGAGAATATTGCTTCTTTGCAGAAGAGAGTGGTAGA...CAGATCATGAGGTCCTTGACCAGAAAGAAATGAAACAGATGGAGGGTGAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTCTGTTCTTTTTCAACTaGTGGAAGACTGCTCTCTTC +
Preference number: 2 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSLFFFN*WKTALF
Trigger: GAAGAGAGCAGTCTTCCAGCAGTTGAAAAAGAACAG...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGTCACTTTCCTTATTTTaGAGCTGGCTTTGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLSLSLF*SWLCRL
Trigger: AAGCCTGCAAAGCCAGCTGCAAAATAAGGAAAGTGA...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATACCAGAGCCTGGAATTaGTCTTCAGCTGCCAGCTTT +
Preference number: 2 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDTRAWN*SSAASF
Trigger: AAAGCTGGCAGCTGAAGAGCAATTCCAGGCTCTGGT...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTTGCTCTGCCTGTGTCTaGCTGAGCTGGGCTTGTAAA +
Preference number: 2 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLCSACV*LSWACK
Trigger: TTTACAAGCCCAGCTCAGCCAGACACAGGCAGAGCA...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCTTAATAAGAGCTGCCTaGAGCTTTCTCTTTCTCTGC +
Preference number: 2 (lower is better)
Translates to: ERRASLSLFKSPCSFNCALIRAA*SFLFLC
Trigger: GCAGAGAAAGAGAAAGCTCCAGGCAGCTCTTATTAA...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp TTTTCTAGAACATCTTGTCCACTTTCCTCAGCAGAAGAGCTCCTCTaGTTGGCAATATCAACAATGCTGATCTCACTGACTTCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: FSRTSCPLSSAEELL*LAISTMLISLTSLS
Trigger: AGACAGAGAAGTCAGTGAGATCAGCATTGTTGATATTGCCAACAAGAGGAGCTCTTCTGCTGAGGAAAGTGGACAAGATGTTCTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp ATCAAGTCTTCTTTGCCTTTCTGCTTCTGCAAGGTTCATTTCCAGTaGCTTTACCTGAGCCCTCAATTCTGTTACCATGCTAAGTTCCTT +
Preference number: 2 (lower is better)
Translates to: IKSSLPFCFCKVHFQ*LYLSPQFCYHAKFL
Trigger: AAGGAACTTAGCATGGTAACAGAATTGAGGGCTCAGGTAAAGCAACTGGAAATGAACCTTGCAGAAGCAGAAAGGCAAAGAAGACTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp CTGAACCATTTTCTCAGTCATACTAAAGCTGATTTCTGTCACTTGTaGATCCTTCTCCTCGATGGTTTGTTGGAGGGTTTCCACATCTCT +
Preference number: 2 (lower is better)
Translates to: LNHFLSHTKADFCHL*ILLLDGLLEGFHIS
Trigger: AGAGATGTGGAAACCCTCCAACAAACCATCGAGGAGAAGGATCAACAAGTGACAGAAATCAGCTTTAGTATGACTGAGAAAATGGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp AAGCTGAACCATTTTCTCAGTCATACTAAAGCTGATTTCTGTCACTaGTTGATCCTTCTCCTCGATGGTTTGTTGGAGGGTTTCCACATC +
Preference number: 2 (lower is better)
Translates to: KLNHFLSHTKADFCH*LILLLDGLLEGFHI
Trigger: GATGTGGAAACCCTCCAACAAACCATCGAGGAGAAGGATCAACAAGTGACAGAAATCAGCTTTAGTATGACTGAGAAAATGGTTCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp TTTATCTTGCAAGGTCTGATTCATCTGTTTGACCAGAGCCTGGAATaGCTCTTCAGCTGCCAGCTTTTCTTCCAAATCCTTCCTTATATG +
Preference number: 2 (lower is better)
Translates to: FILQGLIHLFDQSLE*LFSCQLFFQILPYM
Trigger: CATATAAGGAAGGATTTGGAAGAAAAGCTGGCAGCTGAAGAGCAATTCCAGGCTCTGGTCAAACAGATGAATCAGACCTTGCAAGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp GGCCTGAAGATCAGTCTCCAGTTGTTCATAACTGAACTTAGAATTTaGAATATCAGCCTCTTGCTGCCTTATGATCCCTTCCAAGTTTCC +
Preference number: 2 (lower is better)
Translates to: GLKISLQLFITELRI*NISLLLPYDPFQVS
Trigger: GGAAACTTGGAAGGGATCATAAGGCAGCAAGAGGCTGATATTCAAAATTCTAAGTTCAGTTATGAACAACTGGAGACTGATCTTCAGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCCTTCAGACAAAGCAGTaGATGCACTGCTGTTGTTGT +
Preference number: 2 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLLQTKQ*MHCCCC
Trigger: ACAACAACAGCAGTGCATTCACTGCTTTGTCTGAAG...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCATCCAGTTGCTTTACCTaGGCCCTCAATTCTGTTACC +
Preference number: 2 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSSSCFT*ALNSVT
Trigger: GGTAACAGAATTGAGGGCTCAGGTAAAGCAACTGGA...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTATAGACACTTCTCCCTaGCCTTTGGTGAAAGGAAAG +
Preference number: 2 (lower is better)
Translates to: QDLITTVDLEQISQPTCLIDTSP*PLVKGK
Trigger: CTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTAT...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR GCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGTCTGTTAATAAGAGCTaGCTGGAGCTTTCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLSVNKS*LELSLS
Trigger: AGAAAGAGAAAGCTCCAGGCAGCTCTTATTAACAGA...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTGAAGAACACGATTCCTaGTGGTCTGTGCTTGGGAGT +
Preference number: 2 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLEEHDS*WSVLGS
Trigger: ACTCCCAAGCACAGACCAGCAGGAATCGTGTTCTTC...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGATCTCTTCTGGTTTTTaGTTCATTTCACAAAGTTCC +
Preference number: 2 (lower is better)
Translates to: RLGETFNGTSGQRQFLLEISSGF*FISQSS
Trigger: GGAACTTTGTGAAATGAAGCAAAAACCAGAAGAGAT...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp TTCCCTCACCCTCCATCTGTTTCATTTCTTTCTGGTCAAGGACCTCATGATCTGTCAGCCCTTTTTCCCTaGAGCTGTAATTTAAGAAAT +
Preference number: 2 (lower is better)
Translates to: FPHPPSVSFLSGQGPHDLSALFP*SCNLRN
Trigger: ATTTCTTAAATTACAGCTCCAGGGAAAAAGGGCTGA...CAGATCATGAGGTCCTTGACCAGAAAGAAATGAAACAGATGGAGGGTGAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp AGCTGGTCTCTTTCTTCAGACAAAGCAGTGAATGCACTGCTGTTGTaGTCAGCATTTTTCTTAAACTCCTCAATCAACTGGTTTAGGTTG +
Preference number: 2 (lower is better)
Translates to: SWSLSSDKAVNALLL*SAFFLNSSINWFRL
Trigger: CAACCTAAACCAGTTGATTGAGGAGTTTAAGAAAAATGCTGACAACAACAGCAGTGCATTCACTGCTTTGTCTGAAGAAAGAGACCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp AGAAGCTGGTCTCTTTCTTCAGACAAAGCAGTGAATGCACTGCTGTaGTTGTCAGCATTTTTCTTAAACTCCTCAATCAACTGGTTTAGG +
Preference number: 2 (lower is better)
Translates to: RSWSLSSDKAVNALL*LSAFFLNSSINWFR
Trigger: CCTAAACCAGTTGATTGAGGAGTTTAAGAAAAATGCTGACAACAACAGCAGTGCATTCACTGCTTTGTCTGAAGAAAGAGACCAGCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp TCACAAAGTTCCACCTGTAGCTGCTTTATCCTCTCATCATGCTCTTaGGCTTGCATTTCTAGCTGTGTATGCAGAGCCTTAATTAAATCT +
Preference number: 2 (lower is better)
Translates to: SQSSTCSCFILSSCS*ACISSCVCRALIKS
Trigger: AGATTTAATTAAGGCTCTGCATACACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGAGGATAAAGCAGCTACAGGTGGAACTTTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp TTCTTCTTTAAGCTTATTATTCTCTGCAGCAGCCTCTTGGATGAGTaGGTCTTTTTCCAAGATTATAGAGAGATGTCGCTCTTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: FFFKLIILCSSLLDE*VFFQDYREMSLFQL
Trigger: CAGCTGGAAGAGCGACATCTCTCTATAATCTTGGAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGAGAATAATAAGCTTAAAGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp GCCTCGTATTTCTTCTTTAAGCTTATTATTCTCTGCAGCAGCCTCTaGGATGAGTTGGTCTTTTTCCAAGATTATAGAGAGATGTCGCTC +
Preference number: 2 (lower is better)
Translates to: ASYFFFKLIILCSSL*DELVFFQDYREMSL
Trigger: GAGCGACATCTCTCTATAATCTTGGAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGAGAATAATAAGCTTAAAGAAGAAATACGAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp ACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTaGAGGGGAGTGGTCCAAAGAGTAACAACTAAGTCTATAGATGGC +
Preference number: 2 (lower is better)
Translates to: TGIDVLMLEVREFQV*RGVVQRVTTKSIDG
Trigger: GCCATCTATAGACTTAGTTGTTACTCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTAGATGTCCTATGAGGTaGCATGTTCATTTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: QDLITTVDLEQISQPTCLRCPMR*HVHFPE
Trigger: TTCAGGGAAATGAACATGTCACCTCATAGGACATCT...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR GCA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATACTTTACTTGAGATATaGCTTACACGTTCTGCCCCC +
Preference number: 2 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDTLLEI*LTRSAP
Trigger: GGGGGCAGAACGTGTAAGGCATATCTCAAGTAAAGT...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTCTTTCCAATTTCTGCTaGAGGCTTTCGGCATGGACT +
Preference number: 2 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLLSNFC*RLSAWT
Trigger: AGTCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAG...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTGAAATAAGGGCAGCTTaGAGTTTCCTTTGTATTTGT +
Preference number: 2 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSEIRAA*SFLCIC
Trigger: ACAAATACAAAGGAAACTGCAAGCTGCCCTTATTTC...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCATCAGCTTCCTGCAACTaGTTTTCTGTCTCCTTCTTG +
Preference number: 2 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSSASCN*FSVSFL
Trigger: CAAGAAGGAGACAGAAAAGCAGTTGCAGGAAGCTGA...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTGCTCTTAGTAAAGGCTaGAAGCTGGGTCACAGTACT +
Preference number: 2 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLALSKG*KLGHST
Trigger: AGTACTGTGACCCAGCTTGCAGCCTTTACTAAGAGC...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATTTGGACTCCCAAATCTaGTTGTCATGTTCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDLDSQI*LSCSSL
Trigger: CAGGCTTGAACATGACAAGCAGATTTGGGAGTCCAA...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCTCTCATCATGCTCTTTaGCTTGCATTTCTAGCTGTG +
Preference number: 2 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLSHHAL*LAFLAV
Trigger: CACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGA...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp TCAGTCTCACTGAGTGGGATTTCTTTCTTAGATTCATCTTTCAAGTaGGCTAATTCTTCTTCCAATCTACTGACTCTTTGCAGAAGCTCC +
Preference number: 2 (lower is better)
Translates to: SVSLSGISFLDSSFK*ANSSSNLLTLCRSS
Trigger: GGAGCTTCTGCAAAGAGTCAGTAGATTGGAAGAAGAATTAGCCAACTTGAAAGATGAATCTAAGAAAGAAATCCCACTCAGTGAGACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp TTCACTGATTTCTGCTTGGAGCAAATCTATTTGGTTTGTTTTATCTaGCAAGGTCTGATTCATCTGTTTGACCAGAGCCTGGAATTGCTC +
Preference number: 2 (lower is better)
Translates to: FTDFCLEQIYLVCFI*QGLIHLFDQSLELL
Trigger: GAGCAATTCCAGGCTCTGGTCAAACAGATGAATCAGACCTTGCAAGATAAAACAAACCAAATAGATTTGCTCCAAGCAGAAATCAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTTGTTTCCTTTACAAGTaGTACGGAGTCCCCATCACT +
Preference number: 2 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLCFLYK*YGVPIT
Trigger: AGTGATGGGGACTCCGTAGCACTTGTAAAGGAAACA...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATTCATGCTCTTTGGCTTaGATTTCTAGCTGTGTATGC +
Preference number: 2 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDSCSLA*ISSCVC
Trigger: GCATACACAGCTAGAAATGCAAGCCAAAGAGCATGA...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTAGCTCTAGGATTTTCTaGTGTTTAGATTTAGCAAAC +
Preference number: 2 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSSSRIF*CLDLAN
Trigger: GTTTGCTAAATCTAAACAGCAGAAAATCCTAGAGCT...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTTCTATGCTGAGACTATaGATCTGTTCAGTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLSMLRL*ICSVSR
Trigger: CCTGCTCACTGAACAGATCCATAGTCTCAGCATAGA...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATTTCTGTGAAAGAGCCTaGGACAGTTCTTCCACTTTA +
Preference number: 2 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDFCERA*DSSSTL
Trigger: TAAAGTGGAAGAACTGTCCCAGGCTCTTTCACAGAA...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGTTCTGGATAATTGCTTaGTTTTCACTGATTTCTGCT +
Preference number: 2 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLFWIIA*FSLISA
Trigger: AGCAGAAATCAGTGAAAACCAAGCAATTATCCAGAA...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp TATCTCTGTCTGTATTTTAGTGAGAGCTGCTTCTTTCTCACTAAGTaGTCCAGAAAGGTAGCTAACGTCTTCTTCCTTTTTGCTTATGAG +
Preference number: 2 (lower is better)
Translates to: YLCLYFSESCFFLTK*SRKVANVFFLFAYE
Trigger: CTCATAAGCAAAAAGGAAGAAGACGTTAGCTACCTTTCTGGACAACTTAGTGAGAAAGAAGCAGCTCTCACTAAAATACAGACAGAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp TTTAATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTaGGATTGCCTCTTCCTTGCCAGAAAGCAGGCTTATAATCTTTTG +
Preference number: 2 (lower is better)
Translates to: FNFFIMLLTQFSNSY*DCLFLARKQAYNLL
Trigger: CAAAAGATTATAAGCCTGCTTTCTGGCAAGGAAGAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp CCTTTTCAGTTCATCAAGTTCCTCATTGGCATGATCTCTACTATTTaGCAAGGAACTCATAGACCTTCCAAAAGACTGAATTTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: PFQFIKFLIGMISTI*QGTHRPSKRLNLCC
Trigger: ACAGCACAAATTCAGTCTTTTGGAAGGTCTATGAGTTCCTTGCAAAATAGTAGAGATCATGCCAATGAGGAACTTGATGAACTGAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTATTTGGCTTCTATGCTaGGACTATGGATCTGTTCAG +
Preference number: 2 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLIWLLC*DYGSVQ
Trigger: CTGAACAGATCCATAGTCTCAGCATAGAAGCCAAAT...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCCAGTCCTTCTGTAGCTaGTTTACTTCTTGTTGTTTT +
Preference number: 2 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLQSFCS*FTSCCF
Trigger: AAAACAACAAGAAGTAAAGCAGCTACAGAAGGACTG...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR GCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCATTTGCGGTGTTCAACTaGTTGAGCCAGATTTTCTTT +
Preference number: 2 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSFAVFN*LSQIFF
Trigger: AAAGAAAATCTGGCTCAAGCAGTTGAACACCGCAAA...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 90 bp CTTCAGTTTATCTTCAATTTCACCTACCTTCTTGGCAGCTTCCTTTaGAACACAAACCAATTCTTCTTCCAGTTCTGCAATTCTCTTTTG +
Preference number: 2 (lower is better)
Translates to: LQFIFNFTYLLGSFL*NTNQFFFQFCNSLL
Trigger: CAAAAGAGAATTGCAGAACTGGAAGAAGAATTGGTTTGTGTTCAAAAGGAAGCTGCCAAGAAGGTAGGTGAAATTGAAGATAAACTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR TCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCACATCACGTATGCAATaGGAAAATAACCAACTGGTA +
Preference number: 2 (lower is better)
Translates to: FPGCCNQDLITTVDLEQITSRMQ*ENNQLV
Trigger: TACCAGTTGGTTATTTTCTCATTGCATACGTGATGT...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR CCA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATTCACTGATTTCTGCTTaGAGCAAATCTATTTGGTTT +
Preference number: 2 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDSLISA*SKSIWF
Trigger: AAACCAAATAGATTTGCTCCAAGCAGAAATCAGTGA...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp GCAGCAGTCAGCTCCTGTTGCAGCAAGTCAACGACCTaGGCACGGCCCACCAAGGATTCTTCGTGTTCCTCA +
Preference number: 3 (lower is better)
Translates to: AAVSSCCSKSTT*ARPTKDSSCSS
Trigger: TGAGGAACACGAAGAATCCTTGGTGGGCCGTGCTCAGGTCGTTGACTTGCTGCAACAGGAGCTGACTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTCCTTTAAGCTGTCATaGAGCTGGGTCCTGAGAAGT +
Preference number: 3 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLSFKLS*SWVLRS
Trigger: ACTTCTCAGGACCCAGCTCAATGACAGCTTAAAGGA...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp TGTGTTTCAAAGCGGGCATCTTTCTCTCGGACCACCTaGTGCATGGAACTCAACTGTGCAGCTTGCTCTGCC +
Preference number: 3 (lower is better)
Translates to: CVSKRASFSRTT*CMELNCAACSA
Trigger: GGCAGAGCAAGCTGCACAGTTGAGTTCCATGCAGCAGGTGGTCCGAGAGAAAGATGCCCGCTTTGAAACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp AGACCTTCTGCTGAAGCTGGACCTCTGTCTGGGCCTTaGACTCCCAAATCTGCTTGTCATGTTCAAGCCTGG +
Preference number: 3 (lower is better)
Translates to: RPSAEAGPLSGP*TPKSACHVQAW
Trigger: CCAGGCTTGAACATGACAAGCAGATTTGGGAGTCCAAGGCCCAGACAGAGGTCCAGCTTCAGCAGAAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGCTGTCTCCTTCTTGTTaGCCTCTGTGCTTCTTAACT +
Preference number: 3 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLLSPSC*PLCFLT
Trigger: AGTTAAGAAGCACAGAGGCAAACAAGAAGGAGACAG...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp GAAGTTCCGCCCTGCAGAGCACTCGCATCTTCAGAATaGGAAGGCCAGTCTGGGCACAAGTTGGACTCTAAA +
Preference number: 3 (lower is better)
Translates to: EVPPCRALASSE*EGQSGHKLDSK
Trigger: TTTAGAGTCCAACTTGTGCCCAGACTGGCCTTCTCATTCTGAAGATGCGAGTGCTCTGCAGGGCGGAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp TTGTTTTCCCCCTGTAGAGTATCACAGACCTTCTGCTaGAGCTGGACCTCTGTCTGGGCCTTGGACTCCCAA +
Preference number: 3 (lower is better)
Translates to: LFSPCRVSQTFC*SWTSVWALDSQ
Trigger: TTGGGAGTCCAAGGCCCAGACAGAGGTCCAGCTTCAGCAGAAGGTCTGTGATACTCTACAGGGGGAAAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCAACCATCCTCTTGGCTaGGCTGAAAGACATTCCTCA +
Preference number: 3 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWANHPLG*AERHSS
Trigger: TGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR CAA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGAGCAGTCAGCTCCTGTaGCAGCAAGTCAACGACCTG +
Preference number: 3 (lower is better)
Translates to: RLGETFNGTSGQRQFLLESSQLL*QQVNDL
Trigger: CAGGTCGTTGACTTGCTGCAACAGGAGCTGACTGCT...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp GAACTCTTGTCATGCTTGGAAAGTTGCTCCTCTGACTaGGGTTCTGTAGGCAGAACAGTCCCTCCTTGTGCT +
Preference number: 3 (lower is better)
Translates to: ELLSCLESCSSD*GSVGRTVPPCA
Trigger: AGCACAAGGAGGGACTGTTCTGCCTACAGAACCTCAGTCAGAGGAGCAACTTTCCAAGCATGACAAGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp CTGTTGCTTGTAAGATCTATTAACAGTGCCTGCTCCTaGGTGCCACAGGAGCCAATGATAGGAGTCCGGGAA +
Preference number: 3 (lower is better)
Translates to: LLLVRSINSACS*VPQEPMIGVRE
Trigger: TTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAGGAGCAGGCACTGTTAATAGATCTTACAAGCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
3UTR GCA 72 bp CAGCAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTaGAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTG +
Preference number: 3 (lower is better)
Translates to: QQSSLVLQEVRS*SVVLDQSDSWL
Trigger: CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR GCA 72 bp CGTTCTGCCCCCTCAAGCACTTCACTTTCCTTATTTTaGAGCTGGCTTTGCAGGCTTCTTATCAGGGTACTC +
Preference number: 3 (lower is better)
Translates to: RSAPSSTSLSLF*SWLCRLLIRVL
Trigger: GAGTACCCTGATAAGAAGCCTGCAAAGCCAGCTGCAAAATAAGGAAAGTGAAGTGCTTGAGGGGGCAGAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp AGGCCAGCAATTTGTAGTTGGCTGCTTTCCAATTTCTaGTGCAGGCTTTCGGCATGGACTTCAGCTTCATGG +
Preference number: 3 (lower is better)
Translates to: RPAICSWLLSNF*CRLSAWTSASW
Trigger: CCATGAAGCTGAAGTCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAGCAGCCAACTACAAATTGCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp AAGAAGTGTTTCCATACACTCTTTAGCTGTATCTCCTaGAGGGTGCACCTCTGCCCTAAGCCGGTCATTCTC +
Preference number: 3 (lower is better)
Translates to: KKCFHTLFSCIS*RVHLCPKPVIL
Trigger: GAGAATGACCGGCTTAGGGCAGAGGTGCACCCTGCAGGAGATACAGCTAAAGAGTGTATGGAAACACTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp AACTGTGCAGCTTGCTCTGCCTGTGTCTGGCTGAGCTaGGCTTGTAAAGTGCTAATGAATTCTTCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: NCAACSACVWLS*ACKVLMNSSFS
Trigger: GGAGAAGGAAGAATTCATTAGCACTTTACAAGCCCAGCTCAGCCAGACACAGGCAGAGCAAGCTGCACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp TCTAACTCTACTTTCTCAGCCTCTATTTCCTTCAGCTaGGCCTTAATCTGGGCAACAGAAGTTCCGCCCTGC +
Preference number: 3 (lower is better)
Translates to: SNSTFSASISFS*ALIWATEVPPC
Trigger: GCAGGGCGGAACTTCTGTTGCCCAGATTAAGGCCCAGCTGAAGGAAATAGAGGCTGAGAAAGTAGAGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGAACCATCCTCTTGGCTaGGCTGAAAGACATTCCTCA +
Preference number: 3 (lower is better)
Translates to: STSRGQELQCGVRPVRLLNHPLG*AERHSS
Trigger: TGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR TCA 72 bp TGTAGAACTCTTGTCATGCTTGGAAAGTTGCTCCTCTaGCTGAGGTTCTGTAGGCAGAACAGTCCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: CRTLVMLGKLLL*LRFCRQNSPSL
Trigger: CAAGGAGGGACTGTTCTGCCTACAGAACCTCAGTCAGAGGAGCAACTTTCCAAGCATGACAAGAGTTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp GGGGATGCCTGTCTTTGGTATTGCACTTTGAGAGGCTaGGTCTGGGAGGAAGAAGACCTCAATTCCCTTATA +
Preference number: 3 (lower is better)
Translates to: GDACLWYCTLRG*VWEEEDLNSLI
Trigger: TATAAGGGAATTGAGGTCTTCTTCCTCCCAGACTCAGCCTCTCAAAGTGCAATACCAAAGACAGGCATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp ATGTCTCTGGGGATGCCTGTCTTTGGTATTGCACTTTaGGAGGCTGAGTCTGGGAGGAAGAAGACCTCAATT +
Preference number: 3 (lower is better)
Translates to: MSLGMPVFGIAL*EAESGRKKTSI
Trigger: AATTGAGGTCTTCTTCCTCCCAGACTCAGCCTCTCAAAGTGCAATACCAAAGACAGGCATCCCCAGAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp CCCACCAAGGATTCTTCGTGTTCCTCAAGCTTCCTTTaGAGCACCCTCAATTTCTGTTGCATCTCTGTTTCC +
Preference number: 3 (lower is better)
Translates to: PTKDSSCSSSFL*STLNFCCISVS
Trigger: GGAAACAGAGATGCAACAGAAATTGAGGGTGCTGCAAAGGAAGCTTGAGGAACACGAAGAATCCTTGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp AACCTGGAGTGGAAGAACACGATTCCTGCTGGTCTGTaGTTGGGAGTTTTCCGTCTATGGATTCCCTTACTT +
Preference number: 3 (lower is better)
Translates to: NLEWKNTIPAGL*LGVFRLWIPLL
Trigger: AAGTAAGGGAATCCATAGACGGAAAACTCCCAAGCACAGACCAGCAGGAATCGTGTTCTTCCACTCCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp ATCATCCTGGAGGGAAGACATGCTCTTAGTAAAGGCTaGAAGCTGGGTCACAGTACTGTCCAAGTTTTCCTG +
Preference number: 3 (lower is better)
Translates to: IILEGRHALSKG*KLGHSTVQVFL
Trigger: CAGGAAAACTTGGACAGTACTGTGACCCAGCTTGCAGCCTTTACTAAGAGCATGTCTTCCCTCCAGGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp TGCTCCAAAGCACTATACCGAGACTCTAGTTCAGCCTaGGCTTGGCCTGCTTGCTCAAACTGTTCTAAAAGA +
Preference number: 3 (lower is better)
Translates to: CSKALYRDSSSA*AWPACSNCSKR
Trigger: TCTTTTAGAACAGTTTGAGCAAGCAGGCCAAGCCCAGGCTGAACTAGAGTCTCGGTATAGTGCTTTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp TCTTCTAAACCTGGAGTGGAAGAACACGATTCCTGCTaGTCTGTGCTTGGGAGTTTTCCGTCTATGGATTCC +
Preference number: 3 (lower is better)
Translates to: SSKPGVEEHDSC*SVLGSFPSMDS
Trigger: GGAATCCATAGACGGAAAACTCCCAAGCACAGACCAGCAGGAATCGTGTTCTTCCACTCCAGGTTTAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp CACCATAGTGCTGCTGGTTCTCACGAAGACTCTGACTaGTATCGCAGAGCTGAATGGAAAGGGTGTTTTTCT +
Preference number: 3 (lower is better)
Translates to: HHSAAGSHEDSD*YRRAEWKGCFS
Trigger: AGAAAAACACCCTTTCCATTCAGCTCTGCGATACCAGTCAGAGTCTTCGTGAGAACCAGCAGCACTATGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGCAATTATATCTGAAATaGGCAGGGAAGAAGATGCTG +
Preference number: 3 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWQLYLK*AGKKML
Trigger: CAGCATCTTCTTCCCTGCCAATTTCAGATATAATTG...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR TCA 72 bp TCCATCTGTTTCATTTCTTTCTGGTCAAGGACCTCATaGTCTGCTTCCTCAGCCCTTTTTCCCTGGAGCTGT +
Preference number: 3 (lower is better)
Translates to: SICFISFWSRTS*SASSALFPWSC
Trigger: ACAGCTCCAGGGAAAAAGGGCTGAGGAAGCAGATCATGAGGTCCTTGACCAGAAAGAAATGAAACAGATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp CAGAAACTTGGCTTTCCACATCTGCCAGAGACTTGGTaGGACGTTCAATGGTACCTCTGGCCAAAGACAATT +
Preference number: 3 (lower is better)
Translates to: QKLGFPHLPETW*DVQWYLWPKTI
Trigger: AATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCTCTGGCAGATGTGGAAAGCCAAGTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp TCTGACTTTCGAAATTTCTCCAGCTCATTCCACAGGTaGTCTCTCTCATTCTGCAGACTGGCCATAGCCTTG +
Preference number: 3 (lower is better)
Translates to: SDFRNFSSSFHR*SLSFCRLAIAL
Trigger: CAAGGCTATGGCCAGTCTGCAGAATGAGAGAGATCACCTGTGGAATGAGCTGGAGAAATTTCGAAAGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp ACAAGGTGGACTTATCACCACTGTTTCCTTTACAAGTaGTACGGAGTCCCCATCACTTGCATCCGTGTTACT +
Preference number: 3 (lower is better)
Translates to: TRWTYHHCFLYK*YGVPITCIRVT
Trigger: AGTAACACGGATGCAAGTGATGGGGACTCCGTAGCACTTGTAAAGGAAACAGTGGTGATAAGTCCACCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp CTCTTAGATGTTCTAGGCCAGCAATTTGTAGTTGGCTaGTTTCCAATTTCTGCTGCAGGCTTTCGGCATGGA +
Preference number: 3 (lower is better)
Translates to: LLDVLGQQFVVG*FPISAAGFRHG
Trigger: TCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAGCAGCCAACTACAAATTGCTGGCCTAGAACATCTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp GAACATGTAGGTCTTGTGCTCATACTCAGAGAGTCTTaGTCTTCAGTCTCACCTGGTATAGACTGTGTTCCC +
Preference number: 3 (lower is better)
Translates to: EHVGLVLILRES*SSVSPGIDCVP
Trigger: GGGAACACAGTCTATACCAGGTGAGACTGAAGAGCAAGACTCTCTGAGTATGAGCACAAGACCTACATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp GATGTCGCTCTTCCAGCTGTTGATAGTCACCCACTATaGGGTCTCGATCATTTTGGAGAGAAGACATGGATT +
Preference number: 3 (lower is better)
Translates to: DVALPAVDSHPL*GLDHFGEKTWI
Trigger: AATCCATGTCTTCTCTCCAAAATGATCGAGACCGCATAGTGGGTGACTATCAACAGCTGGAAGAGCGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp ATTCCTGCTGGTCTGTGCTTGGGAGTTTTCCGTCTATaGATTCCCTTACTTGAATCTGGAGTTGCCTTAGCT +
Preference number: 3 (lower is better)
Translates to: IPAGLCLGVFRL*IPLLESGVALA
Trigger: AGCTAAGGCAACTCCAGATTCAAGTAAGGGAATCCATAGACGGAAAACTCCCAAGCACAGACCAGCAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp TTCTGCTGCAGGCTTTCGGCATGGACTTCAGCTTCATaGGATACTGTCTTTAGACTCTCGATTTCTAAACCC +
Preference number: 3 (lower is better)
Translates to: FCCRLSAWTSAS*DTVFRLSISKP
Trigger: GGGTTTAGAAATCGAGAGTCTAAAGACAGTATCCCATGAAGCTGAAGTCCATGCCGAAAGCCTGCAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp CTTCCAGCAGCTTCCTTAATTCATTCACTTCCTGTCTaGTGTTGCATAGCTGCTGCTGAGCTTCAGAAAAGC +
Preference number: 3 (lower is better)
Translates to: LPAASLIHSLPV*CCIAAAELQKS
Trigger: GCTTTTCTGAAGCTCAGCAGCAGCTATGCAACACCAGACAGGAAGTGAATGAATTAAGGAAGCTGCTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
3UTR-3UTR CAA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTAGAGAATTCCAAGTTTaGAGGGGAGTGGTCCAAAGA +
Preference number: 3 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSREFQV*RGVVQR
Trigger: TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGAGAGAATTCCAAGTTTaGAGGGGAGTGGTCCAAAGA +
Preference number: 3 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQREFQV*RGVVQR
Trigger: TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR CAA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGAACCATCCTCTTGGCTaGGCTGAAAGACATTCCTCA +
Preference number: 3 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLNHPLG*AERHSS
Trigger: TGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp TTCCCTCACCCTCCATCTGTTTCATTTCTTTCTGGTCAAGGACCTCATGATCTGGCAGAAGAGCTCCTCTaGTTGGCAATATCAACAATG +
Preference number: 3 (lower is better)
Translates to: FPHPPSVSFLSGQGPHDLAEELL*LAISTM
Trigger: CATTGTTGATATTGCCAACAAGAGGAGCTCTTCTGC...CAGATCATGAGGTCCTTGACCAGAAAGAAATGAAACAGATGGAGGGTGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp GTGCTTGGGAGTTTTCCGTCTATGGATTCCCTTACTTaGATCTGGAGTTGCCTTAGCTGGTCTCCAATATTC +
Preference number: 3 (lower is better)
Translates to: VLGSFPSMDSLT*IWSCLSWSPIF
Trigger: GAATATTGGAGACCAGCTAAGGCAACTCCAGATTCAAGTAAGGGAATCCATAGACGGAAAACTCCCAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp GGTATAGACTGTGTTCCCTCTTCAGTGACATTCGTTTaGTTATCATGTTTCTCGGTGGCCTCTAGGTTAGCT +
Preference number: 3 (lower is better)
Translates to: GIDCVPSSVTFV*LSCFSVASRLA
Trigger: AGCTAACCTAGAGGCCACCGAGAAACATGATAACCAAACGAATGTCACTGAAGAGGGAACACAGTCTATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCTGTTCAGTGAGCAGGTaGTCATGGGCAGTTTGGCTT +
Preference number: 3 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLCSVSR*SWAVWL
Trigger: AAGCCAAACTGCCCATGACAACCTGCTCACTGAACA...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTATTTTGAGCAGAAACTaGGCTTTCCACATCTGCCAG +
Preference number: 3 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSILSRN*AFHICQ
Trigger: CTGGCAGATGTGGAAAGCCAAGTTTCTGCTCAAAAT...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp TTGAGATTGTCTGCTAGGACCCTTGCTGCTTCACTTTaGGTGTCATCTAGCAGGACTTTGAAGCTAGCTAAT +
Preference number: 3 (lower is better)
Translates to: LRLSARTLAASL*VSSSRTLKLAN
Trigger: ATTAGCTAGCTTCAAAGTCCTGCTAGATGACACTCAAAGTGAAGCAGCAAGGGTCCTAGCAGACAATCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp CAAAGTTCCACCTGTAGCTGCTTTATCCTCTCATCATaGTCTTTGGCTTGCATTTCTAGCTGTGTATGCAGA +
Preference number: 3 (lower is better)
Translates to: QSSTCSCFILSS*SLACISSCVCR
Trigger: TCTGCATACACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGAGGATAAAGCAGCTACAGGTGGAACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTCAATTATATCTGAAATaGGCAGGGAAGAAGATGCTG +
Preference number: 3 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSQLYLK*AGKKML
Trigger: CAGCATCTTCTTCCCTGCCAATTTCAGATATAATTG...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR CAA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTAGATGCTGTTTCATGTaGTTGCAAGGGCAGTCTATT +
Preference number: 3 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSRCCFM*LQGQSI
Trigger: AATAGACTGCCCTTGCAACAACATGAAACAGCATCT...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATTGTCTGCTAGGACCCTaGCTGCTTCACTTTGAGTGT +
Preference number: 3 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDCLLGP*LLHFEC
Trigger: ACACTCAAAGTGAAGCAGCAAGGGTCCTAGCAGACA...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp TTCACATCTTTAGATTTGGCTTCTATGCTGAGACTATaGATCTGTTCAGTGAGCAGGTTGTCATGGGCAGTT +
Preference number: 3 (lower is better)
Translates to: FTSLDLASMLRL*ICSVSRLSWAV
Trigger: AACTGCCCATGACAACCTGCTCACTGAACAGATCCATAGTCTCAGCATAGAAGCCAAATCTAAAGATGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp TTCTGGTTTCCAGTGTTCACTACTACCTGTACAAGGTaGACTTATCACCACTGTTTCCTTTACAAGTGCTAC +
Preference number: 3 (lower is better)
Translates to: FWFPVFTTTCTR*TYHHCFLYKCY
Trigger: GTAGCACTTGTAAAGGAAACAGTGGTGATAAGTCCACCTTGTACAGGTAGTAGTGAACACTGGAAACCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp TATTTATTTCTTCATGCAGCCTACTGGTCAGTTCTCTaGAGGCCTGAAGATCAGTCTCCAGTTGTTCATAAC +
Preference number: 3 (lower is better)
Translates to: YLFLHAAYWSVL*RPEDQSPVVHN
Trigger: GTTATGAACAACTGGAGACTGATCTTCAGGCCTCCAGAGAACTGACCAGTAGGCTGCATGAAGAAATAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCAGAGAATTCCAAGTTTaGAGGGGAGTGGTCCAAAGA +
Preference number: 3 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLREFQV*RGVVQR
Trigger: TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCT...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAACTTTCCGTGAAGAGTaGGAGAGAAGACCTGTAAAT +
Preference number: 3 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRTFREE*ERRPVN
Trigger: ATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGT...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR-3UTR CAA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGATCTTTCTGCTGCAGTaGAACATCCTTCTGTCTAAT +
Preference number: 3 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLIFLLQ*NILLSN
Trigger: ATTAGACAGAAGGATGTTCAACTGCAGCAGAAAGAT...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTTGCTTTTGTCTTATCTaGATACTCCTGAAGTTGAGC +
Preference number: 3 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSCFCLI*ILLKLS
Trigger: GCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCA...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp GCTTTAACAGTTCTCTCCAGAGCACTAATTTTCTCTTaGTACCTGATGCAGTCCTTCTGTAGCTGCTTTACT +
Preference number: 3 (lower is better)
Translates to: ALTVLSRALIFS*YLMQSFCSCFT
Trigger: AGTAAAGCAGCTACAGAAGGACTGCATCAGGTATCAAGAGAAAATTAGTGCTCTGGAGAGAACTGTTAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp CTCTTAAGTTCTGATTCCAACTTAGCTAATTCATTCTaGGAACTGTGGTATAGGTGGCGTGTCTCTTCTAGC +
Preference number: 3 (lower is better)
Translates to: LLSSDSNLANSF*ELWYRWRVSSS
Trigger: GCTAGAAGAGACACGCCACCTATACCACAGTTCTCAGAATGAATTAGCTAAGTTGGAATCAGAACTTAAGAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp TCTTTGGATAGGAGCTGTTGGTTAAGTTTCTCAAGGTaGGACAAGCTATTCTCCTCAGTGGAGTTCATTGAA +
Preference number: 3 (lower is better)
Translates to: SLDRSCWLSFSR*DKLFSSVEFIE
Trigger: TTCAATGAACTCCACTGAGGAGAATAGCTTGTCTCACCTTGAGAAACTTAACCAACAGCTCCTATCCAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp GGTTTTTGCTTCATTTCACAAAGTTCCACCTGTAGCTaGTTTATCCTCTCATCATGCTCTTTGGCTTGCATT +
Preference number: 3 (lower is better)
Translates to: GFCFISQSSTCS*FILSSCSLACI
Trigger: AATGCAAGCCAAAGAGCATGATGAGAGGATAAAGCAGCTACAGGTGGAACTTTGTGAAATGAAGCAAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp GGGAGGCAGGGAATAGGCACAAATGGAATTCTATCCTaGCTGTCCTTCTCAGGTCTATCTATATTTAATTTT +
Preference number: 3 (lower is better)
Translates to: GRQGIGTNGILS*LSFSGLSIFNF
Trigger: AAAATTAAATATAGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTAGAGAATTCCAAGTTTaGAGGGGAGTGGTCCAAAGA +
Preference number: 3 (lower is better)
Translates to: QIIRFIETILLAWLKDIPREFQV*RGVVQR
Trigger: TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR-3UTR CAA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTGAACTCTTGTCATGCTaGGAAAGTTGCTCCTCTGAC +
Preference number: 3 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLELLSC*ESCSSD
Trigger: GTCAGAGGAGCAACTTTCCAAGCATGACAAGAGTTC...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATTTCTTCCTTACTTATTaGTCCTGCTGGGCTCATCTC +
Preference number: 3 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDFFLTY*SCWAHL
Trigger: GAGATGAGCCCAGCAGGACAAATAAGTAAGGAAGAA...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATATTGAAACCATCCTCTaGGCTTGGCTGAAAGACATT +
Preference number: 3 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDIETIL*AWLKDI
Trigger: AATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAAT...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTTCCTCTGTAGAACTCTaGTCATGCTTGGAAAGTTGC +
Preference number: 3 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLSSVEL*SCLESC
Trigger: GCAACTTTCCAAGCATGACAAGAGTTCTACAGAGGA...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATCAATCTACTGACTCTTaGCAGAAGCTCCTTTCTGTT +
Preference number: 3 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDQSTDS*QKLLSV
Trigger: AACAGAAAGGAGCTTCTGCAAAGAGTCAGTAGATTG...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCAGCACTAATTTTCTCTaGATACCTGATGCAGTCCTT +
Preference number: 3 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLSTNFL*IPDAVL
Trigger: AAGGACTGCATCAGGTATCAAGAGAAAATTAGTGCT...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTTTGAATATCAGCCTCTaGCTGCCTTATGATCCCTTC +
Preference number: 3 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLLNISL*LPYDPF
Trigger: GAAGGGATCATAAGGCAGCAAGAGGCTGATATTCAA...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp ACCCTATTCTGCAAGAGACCTAAATCAGATGTCCTATaGGGTGACATGTTCATTTCCCTGAACTCTGTTTAT +
Preference number: 3 (lower is better)
Translates to: TLFCKRPKSDVL*GDMFISLNSVY
Trigger: ATAAACAGAGTTCAGGGAAATGAACATGTCACCTCATAGGACATCTGATTTAGGTCTCTTGCAGAATAGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR TCA 72 bp TGCTCATTTTCTTTCTTCAGAAGGTCAAATTCATGCTaGAGTTCTTCCTTACTTATTTGTCCTGCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: CSFSFFRRSNSC*SSSLLICPAGL
Trigger: GAGCCCAGCAGGACAAATAAGTAAGGAAGAACTTCAGCATGAATTTGACCTTCTGAAGAAAGAAAATGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp AGGTTTTCCAGCTCTTTAATTTCTTTATCATGTTGCTaGCGCAGTTCAGCAATAGCTACTTGGATTGCCTCT +
Preference number: 3 (lower is better)
Translates to: RFSSSLISLSCC*RSSAIATWIAS
Trigger: AGAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATTAAAGAGCTGGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp TGTAGCTGCTTTATCCTCTCATCATGCTCTTTGGCTTaGATTTCTAGCTGTGTATGCAGAGCCTTAATTAAA +
Preference number: 3 (lower is better)
Translates to: CSCFILSSCSLA*ISSCVCRALIK
Trigger: TTTAATTAAGGCTCTGCATACACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGAGGATAAAGCAGCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCTATCACCATCCTGCTTaGTTGATTTCAATTCTACTC +
Preference number: 3 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLYHHPA*LISILL
Trigger: GAGTAGAATTGAAATCAACAAAGCAGGATGGTGATA...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR-3UTR CAA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTGTTCACCATCCTTTGTaGATATCTGACTCAGTAAGG +
Preference number: 3 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLVHHPL*ISDSVR
Trigger: CCTTACTGAGTCAGATATCAACAAAGGATGGTGAAC...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR TCA 72 bp GAAAGACTTGGGCCACTTAATACCTTAGTATACATGTaGTCAAGGGCAAAAGCAAAGGGATTCTATCCTTAT +
Preference number: 3 (lower is better)
Translates to: ERLGPLNTLVYM*SRAKAKGFYPY
Trigger: ATAAGGATAGAATCCCTTTGCTTTTGCCCTTGATCACATGTATACTAAGGTATTAAGTGGCCCAAGTCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR GCA 72 bp ATATCTGGTACAGCAGAAAGGGATTTATCACCATCCTaGTTTGTTGATTTCAATTCTACTCCAGCATCATTT +
Preference number: 3 (lower is better)
Translates to: ISGTAERDLSPS*FVDFNSTPASF
Trigger: AAATGATGCTGGAGTAGAATTGAAATCAACAAAGCAGGATGGTGATAAATCCCTTTCTGCTGTACCAGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp AAATTCATGCTGAAGTTCTTCCTTACTTATTTGTCCTaGTGGGCTCATCTCATCATAATTTTGTTTAAGGCC +
Preference number: 3 (lower is better)
Translates to: KFMLKFFLTYLS*WAHLIIILFKA
Trigger: GGCCTTAAACAAAATTATGATGAGATGAGCCCAGCAGGACAAATAAGTAAGGAAGAACTTCAGCATGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR GCA 72 bp TTGCTTATGAGTTTTTGCAGTTCATCCAGTTTAGGTTaGAATTCTCTTAGATGTTCTAGGCCAGCAATTTGT +
Preference number: 3 (lower is better)
Translates to: LLMSFCSSSSLG*NSLRCSRPAIC
Trigger: ACAAATTGCTGGCCTAGAACATCTAAGAGAATTGCAACCTAAACTGGATGAACTGCAAAAACTCATAAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp ATTTTTGTTATTTCAAGTTCCTTCTGTGAAAGAGCCTaGGACAGTTCTTCCACTTTACTTGAGATATGCCTT +
Preference number: 3 (lower is better)
Translates to: IFVISSSFCERA*DSSSTLLEICL
Trigger: AAGGCATATCTCAAGTAAAGTGGAAGAACTGTCCCAGGCTCTTTCACAGAAGGAACTTGAAATAACAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CCA 72 bp TCTTCTTTAAGCTTATTATTCTCTGCAGCAGCCTCTTaGATGAGTTGGTCTTTTTCCAAGATTATAGAGAGA +
Preference number: 3 (lower is better)
Translates to: SSLSLLFSAAAS*MSWSFSKIIER
Trigger: TCTCTCTATAATCTTGGAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGAGAATAATAAGCTTAAAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGAGCAAGTCAACGACCTaGGCACGGCCCACCAAGGAT +
Preference number: 4 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLSKSTT*ARPTKD
Trigger: ATCCTTGGTGGGCCGTGCTCAGGTCGTTGACTTGCT...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGGGGCTGGTGGAAGGCTaGGCTGCAGACCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVGLVEG*AADLCF
Trigger: GAAGCAGAGGTCTGCAGCTCAGCCTTCCACCAGCCC...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAAAACAGTGCCTGCTCCTaGGTGCCACAGGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQNSACS*VPQEPM
Trigger: CATTGGCTCCTGTGGCACTCAGGAGCAGGCACTGTT...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR GCA 90 bp AGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACGGTGGAAGGCTGAGCTaGAGACCTCTGCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: RVNAGLASIQRHSGSFDNGGRLS*RPLLPF
Trigger: GAAGGGAAGCAGAGGTCTGCAGCTCAGCCTTCCACC...GTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTGCTAGAAGTGGCACTCGGGTCCGTGAATGACAGAGTGAACGCAGGACTCGCTTGTGCTCTAACCGTCTaGTCTGCTCCTCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: LLEVALGSVNDRVNAGLACALTV*SAPRPQ
Trigger: CTGTGGCCGAGGAGCAGATCAGACGGTTAGAGCACA...AGCGAGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGTGCCACTTCTAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR TCA 90 bp CTGCTAGAAGTGGCACTCGGGTCCGTGAATGACAGAGTGAACGCAGGACTCGCTAACAGTGCCTGCTCCTaGGTGCCACAGGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: LLEVALGSVNDRVNAGLANSACS*VPQEPM
Trigger: CATTGGCTCCTGTGGCACTCAGGAGCAGGCACTGTT...AGCGAGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGTGCCACTTCTAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR GCA 90 bp AGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACCACCACCAATTGCTCTaGATAAGCCAGGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RVNAGLASIQRHSGSFDNHHQLL*ISQALL
Trigger: CAGGAGCGCCTGGCTTATGCAGAGCAATTGGTGGTG...GTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTGCTAGAAGTGGCACTCGGGTCCGTGAATGACAGAGTGAACGCAGGACTCGCTTGCAGGGTGCACCTCTaGCCTAAGCCGGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: LLEVALGSVNDRVNAGLACRVHL*PKPVIL
Trigger: GAGAATGACCGGCTTAGGGCAGAGGTGCACCCTGCA...AGCGAGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGTGCCACTTCTAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGCTCAACTGTGCAGCTTaGTCTGCCTGTGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLLNCAA*SACVWL
Trigger: CAGCCAGACACAGGCAGAGCAAGCTGCACAGTTGAG...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAAGGAGGCCGAGGTGGGTaGATCACAAGATCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQGGRGG*ITRSGV
Trigger: AACTCCTGATCTTGTGATCCACCCACCTCGGCCTCC...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491690.1
CDS-3UTR TCA 90 bp AGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACGGAAAGTTGCTCCTCTaGCTGAGGTTCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: RVNAGLASIQRHSGSFDNGKLLL*LRFCRQ
Trigger: CTGCCTACAGAACCTCAGTCAGAGGAGCAACTTTCC...GTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGCCCGCCTGCAGCTCTTaGACCTGCTTCTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVPACSS*TCFSKT
Trigger: AGTCTTGGAGAAGCAGGTTCAAGAGCTGCAGGCGGG...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTGCAGGCACTTTCCGTaGAGAGTTGGAGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLCRHFP*RVGEKT
Trigger: GGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCA...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTTAGCTGTATCTCCTaGAGGGTGCACCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLFSCIS*RVHLCP
Trigger: AGGGCAGAGGTGCACCCTGCAGGAGATACAGCTAAA...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp GTGAATGACAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCCCTCTGTCTGGGCCTTaGACTCCCAAATCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VNDRVNAGLASIQRHSGSPLSGP*TPKSAC
Trigger: ACAAGCAGATTTGGGAGTCCAAGGCCCAGACAGAGG...GGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTGTCATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGCTCGCATCTTCAGAATaGGAAGGCCAGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPLASSE*EGQSGH
Trigger: GTGCCCAGACTGGCCTTCTCATTCTGAAGATGCGAG...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGACTCGGGTCCGTGAATaGCAGAGTGAACGCAGGACT +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVTRVRE*QSERRT
Trigger: AGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGT...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR GCA 90 bp CTGCTAGAAGTGGCACTCGGGTCCGTGAATGACAGAGTGAACGCAGGACTCGCTTCTAACCGTCTGATCTaGTCCTCGGCCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LLEVALGSVNDRVNAGLASNRLI*SSATER
Trigger: TCTCTCTGTGGCCGAGGAGCAGATCAGACGGTTAGA...AGCGAGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGTGCCACTTCTAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR GCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGGAGTCCCATTCACTGTaGTCTAACCGTCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLESHSL*SNRLIC
Trigger: GCAGATCAGACGGTTAGAGCACAGTGAATGGGACTC...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR GCA 90 bp AGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTTCTCTCGGACCACCTaGTGCATGGAACTCAACTGT +
Preference number: 4 (lower is better)
Translates to: RVNAGLASIQRHSGSFDNFSRTT*CMELNC
Trigger: ACAGTTGAGTTCCATGCAGCAGGTGGTCCGAGAGAA...GTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGGACTCTAGTTCAGCCTaGGCTTGGCCTGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVDSSSA*AWPACS
Trigger: TGAGCAAGCAGGCCAAGCCCAGGCTGAACTAGAGTC...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGCTGCTGGTCTGTGCTTaGGAGTTTTCCGTCTATGGA +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLLLVCA*EFSVYG
Trigger: TCCATAGACGGAAAACTCCCAAGCACAGACCAGCAG...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GTGAATGACAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCGGAGCCCTCATATTCTaGTCAGTGTCATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: VNDRVNAGLASIQRHSGSGALIF*SVSSSP
Trigger: AGGAGATGATGACACTGATCAGAATATGAGGGCTCC...GGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTGTCATTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTTGCTGCTTCACTTTaGGTGTCATCTAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQLAASL*VSSSRT
Trigger: AGTCCTGCTAGATGACACTCAAAGTGAAGCAGCAAG...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGCAGCAGCCTCTTGGATaGGTTGGTCTTTTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLQQPLG*VGLFPR
Trigger: TCTTGGAAAAAGACCAACTCATCCAAGAGGCTGCTG...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GTGAATGACAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCCTGGTATCGCAGAGCTaGATGGAAAGGGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VNDRVNAGLASIQRHSGSLVSQS*MERVFF
Trigger: GAAAAACACCCTTTCCATTCAGCTCTGCGATACCAG...GGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTGTCATTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR TCA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGGTATCGCAGAGCTaGATGGAAAGGGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQLVSQS*MERVFF
Trigger: GAAAAACACCCTTTCCATTCAGCTCTGCGATACCAG...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR GCA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAAGCTTCAGAAAAGCTTTaGTGCGGTTCCCTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQASEKL*CGSLSS
Trigger: GGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGC...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR CCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGGACTCTAGTTCAGCCTaGGCTTGGCCTGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLDSSSA*AWPACS
Trigger: TGAGCAAGCAGGCCAAGCCCAGGCTGAACTAGAGTC...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGCCTCTGTCTGGGCCTTaGACTCCCAAATCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPPLSGP*TPKSAC
Trigger: ACAAGCAGATTTGGGAGTCCAAGGCCCAGACAGAGG...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTCTGCAGCAGCCTCTTaGATGAGTTGGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLSAAAS*MSWSFS
Trigger: GGAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGA...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGAAGCTGTCATTGAGCTaGGTCCTGAGAAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLKLSLS*VLRSSV
Trigger: GACAGAACTTCTCAGGACCCAGCTCAATGACAGCTT...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR CCA 90 bp AGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACCATTCACTTCCTGTCTaGTGTTGCATAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RVNAGLASIQRHSGSFDNHSLPV*CCIAAA
Trigger: AGCAGCAGCTATGCAACACCAGACAGGAAGTGAATG...GTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGAGTTGCTCCTCTGACTaGGGTTCTGTAGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSCSSD*GSVGRT
Trigger: TGTTCTGCCTACAGAACCTCAGTCAGAGGAGCAACT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCCTGCCTGTGTCTGGCTaGGCTGGGCTTGTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFLPVSG*AGLVKC
Trigger: GCACTTTACAAGCCCAGCTCAGCCAGACACAGGCAG...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGCAATATTCTCCTCAGTaGCTGCCTGTGTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVQYSPQ*LPVCPH
Trigger: ATGAGGGCACACAGGCAGTCACTGAGGAGAATATTG...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGGCTTCCACCACATGCTaGATCCTTTCTGCTTCATTA +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLASTTC*ILSASL
Trigger: TAATGAAGCAGAAAGGATTCAGCATGTGGTGGAAGC...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCTTCTCCATCCTGAGCTaGTGCAGCTCATGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSFSILS*CSSCCQ
Trigger: CTGGCAGCATGAGCTGCATCAGCTCAGGATGGAGAA...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCCCGCCTGCAGCTCTTaGACCTGCTTCTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEPACSS*TCFSKT
Trigger: AGTCTTGGAGAAGCAGGTTCAAGAGCTGCAGGCGGG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340645.9
ENST00000614479.4
CDS-3UTR TCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGAGCCACCTTCCCCCTaGAACAGGAGAAAATACAGG +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAEPPSP*NRRKYR
Trigger: CCTGTATTTTCTCCTGTTTCAGGGGGAAGGTGGCTC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTCTGTGCAGCTTGCTCTaGCTGTGTCTGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSLCSLL*LCLAEL
Trigger: CAGCTCAGCCAGACACAGGCAGAGCAAGCTGCACAG...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTGAATGACAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTGGGCTTGGCCTGCTTaGTCAAACTGTTCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: VNDRVNAGLASIQRHSGSWAWPA*SNCSKR
Trigger: TCTTTTAGAACAGTTTGAGCAAGCAGGCCAAGCCCA...GGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTGTCATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp AGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTTCCTTTACAAGTaGTACGGAGTCCCCATCACT +
Preference number: 4 (lower is better)
Translates to: RVNAGLASIQRHSGSFDNCFLYK*YGVPIT
Trigger: AGTGATGGGGACTCCGTAGCACTTGTAAAGGAAACA...GTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGGAAGAACACGATTCCTaGTGGTCTGTGCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPEEHDS*WSVLGS
Trigger: ACTCCCAAGCACAGACCAGCAGGAATCGTGTTCTTC...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGAGTTCCACCTGTAGCTaGTTTATCCTCTCATCATGC +
Preference number: 4 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLSSTCS*FILSSC
Trigger: GCATGATGAGAGGATAAAGCAGCTACAGGTGGAACT...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTTGGCTTTCCACATCTaGCAGAGACTTGGTGAGACG +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPLAFHI*QRLGET
Trigger: CGTCTCACCAAGTCTCTGGCAGATGTGGAAAGCCAA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GTGAATGACAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTCAGCTTCCTGCAACTaGTTTTCTGTCTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VNDRVNAGLASIQRHSGSSASCN*FSVSFL
Trigger: CAAGAAGGAGACAGAAAAGCAGTTGCAGGAAGCTGA...GGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTGTCATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp GCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTGTGAACTCCATTCTTTTGTATCTCCTGCAGGGTaGACCTCTGCCCTAAGCCGG +
Preference number: 4 (lower is better)
Translates to: AAVPLVPQGHSFCELHSFVSPAG*TSALSR
Trigger: CCGGCTTAGGGCAGAGGTGCACCCTGCAGGAGATAC...AAAAGAATGGAGTTCACAGAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCCAGGTGCTTCTCTTCTaGCTGTTCCAGTCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAQVLLF*LFQSSL
Trigger: GAGCGAAGACTGGAACAGGCAGAAGAGAAGCACCTG...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGGGTGGAAGGCTGAGCTaGAGACCTCTGCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEGGRLS*RPLLPF
Trigger: GAAGGGAAGCAGAGGTCTGCAGCTCAGCCTTCCACC...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGAATTTCTGTGCAGCTTaGTCTGCCTGTGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPNFCAA*SACVWL
Trigger: CAGCCAGACACAGGCAGAGCAAGCTGCACAGAAATT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614479.4
CDS-3UTR CCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTCTATGCTGAGACTATaGATCTGTTCAGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLSMLRL*ICSVSR
Trigger: CCTGCTCACTGAACAGATCCATAGTCTCAGCATAGA...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGAGCTGGGCCTTAATCTaGGCAACAGAAGTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSWALI*ATEVPP
Trigger: GGGCGGAACTTCTGTTGCCCAGATTAAGGCCCAGCT...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGCACGAAGACTCTGACTaGTATCGCAGAGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVHEDSD*YRRAEW
Trigger: CCATTCAGCTCTGCGATACCAGTCAGAGTCTTCGTG...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGGGAGCCCTCATATTCTaGTCAGTGTCATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPGALIF*SVSSSP
Trigger: AGGAGATGATGACACTGATCAGAATATGAGGGCTCC...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGAGTTGCTCCTCTGACTaGGGTTCTGTAGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLSCSSD*GSVGRT
Trigger: TGTTCTGCCTACAGAACCTCAGTCAGAGGAGCAACT...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCCAATATTCTCCTCAGTaGCTGCCTGTGTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAQYSPQ*LPVCPH
Trigger: ATGAGGGCACACAGGCAGTCACTGAGGAGAATATTG...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGTCCAGTTGCTTTACCTaGGCCCTCAATTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVSSCFT*ALNSVT
Trigger: GGTAACAGAATTGAGGGCTCAGGTAAAGCAACTGGA...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGATTTGGCTTCTATGCTaGGACTATGGATCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLIWLLC*DYGSVQ
Trigger: CTGAACAGATCCATAGTCTCAGCATAGAAGCCAAAT...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCTCGCATCTTCAGAATaGGAAGGCCAGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQELASSE*EGQSGH
Trigger: GTGCCCAGACTGGCCTTCTCATTCTGAAGATGCGAG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGCAGCAGCCTCTTGGATaGGTTGGTCTTTTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPQQPLG*VGLFPR
Trigger: TCTTGGAAAAAGACCAACTCATCCAAGAGGCTGCTG...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTGCTAGAAGTGGCACTCGGGTCCGTGAATGACAGAGTGAACGCAGGACTCGCTCTCAGTGGAGTTCATTaGAAAGGCGGTTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLEVALGSVNDRVNAGLALSGVH*KGGFRK
Trigger: CTTTCTGAAACCGCCTTTTCAATGAACTCCACTGAG...AGCGAGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGTGCCACTTCTAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGAGTTGTGAGGACAAGTaGAGCAATTGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLSCEDK*SNCSSL
Trigger: CAAAGATGAGCAATTGCTTCACTTGTCCTCACAACT...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGAGCTCATTCCACAGGTaGTCTCTCTCATTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVSSFHR*SLSFCR
Trigger: TCTGCAGAATGAGAGAGATCACCTGTGGAATGAGCT...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGGGGCTGGTGGAAGGCTaGGCTGCAGACCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKGLVEG*AADLCF
Trigger: GAAGCAGAGGTCTGCAGCTCAGCCTTCCACCAGCCC...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTTCTCCATCCTGAGCTaGTGCAGCTCATGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEFSILS*CSSCCQ
Trigger: CTGGCAGCATGAGCTGCATCAGCTCAGGATGGAGAA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTTTGGTATTGCACTTTaGGAGGCTGAGTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLFGIAL*EAESGR
Trigger: CCTCCCAGACTCAGCCTCTCAAAGTGCAATACCAAA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGCTGGTATCGCAGAGCTaGATGGAAAGGGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPLVSQS*MERVFF
Trigger: GAAAAACACCCTTTCCATTCAGCTCTGCGATACCAG...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTGTGAACTCCATTCTTTTTGTGCTCTAACCGTCTaGTCTGCTCCTCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: AAVPLVPQGHSFCELHSFCALTV*SAPRPQ
Trigger: CTGTGGCCGAGGAGCAGATCAGACGGTTAGAGCACA...AAAAGAATGGAGTTCACAGAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR TCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGCTGTTCCACTGGAATTaGTGTTCTGATGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLLFHWN*CSDVRG
Trigger: ACCTCTAACATCAGAACATCAATTCCAGTGGAACAG...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCTGCAGGCACTTTCCGTaGAGAGTTGGAGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSCRHFP*RVGEKT
Trigger: GGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCA...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCACCACCAATTGCTCTaGATAAGCCAGGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEHHQLL*ISQALL
Trigger: CAGGAGCGCCTGGCTTATGCAGAGCAATTGGTGGTG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGCTCTGTAGAACTCTGTaGAGGTTGTTCTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLLCRTL*RLFCLC
Trigger: GCACAGGCAGAACAACCTGCACAGAGTTCTACAGAG...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGCATCACAGGCAGACTaGAGCTCTTGTCCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAASQAD*SSCPVF
Trigger: AAAGACTGGACAAGAGCTGCAGTCTGCCTGTGATGC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGACTGACTTCTCTGTCTaGCTCCCCAGTTCTATTCTG +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPTDFSV*LPSSIL
Trigger: CAGAATAGAACTGGGGAGGCAGACAGAGAAGTCAGT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTCACTTTCCTTATTTTaGAGCTGGCTTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RVNAGLASIQRHSGSFDNSLSLF*SWLCRL
Trigger: AAGCCTGCAAAGCCAGCTGCAAAATAAGGAAAGTGA...GTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGGGAGTCCCCATCACTTaGATCCGTGTTACTTGTGAT +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPGVPIT*IRVTCD
Trigger: ATCACAAGTAACACGGATGCAAGTGATGGGGACTCC...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGATTCCTGCTGGTCTGTaGTTGGGAGTTTTCCGTCTA +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVIPAGL*LGVFRL
Trigger: TAGACGGAAAACTCCCAAGCACAGACCAGCAGGAAT...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTTGGCTTTCCACATCTaGCAGAGACTTGGTGAGACG +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWALAFHI*QRLGET
Trigger: CGTCTCACCAAGTCTCTGGCAGATGTGGAAAGCCAA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTGAATGACAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCGTAGCTGAGAGAAGTTaGTGTTCAGTTGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: VNDRVNAGLASIQRHSGSVAERS*CSVAEF
Trigger: GAATTCAGCAACTGAACAGCAACTTCTCTCAGCTAC...GGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTGTCATTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR GCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGAGTCCCATTCACTGTaGTCTAACCGTCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAESHSL*SNRLIC
Trigger: GCAGATCAGACGGTTAGAGCACAGTGAATGGGACTC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGTCTCGGACCACCTGCTaGATGGAACTCAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSRTTC*MELNCA
Trigger: TGCACAGTTGAGTTCCATGCAGCAGGTGGTCCGAGA...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393667.7
CDS-3UTR CCA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAAAACTCTTGTCATGCTTaGAAAGTTGCTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQNSCHA*KVAPLT
Trigger: AGTCAGAGGAGCAACTTTCCAAGCATGACAAGAGTT...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGCTGCTGGTCTGTGCTTaGGAGTTTTCCGTCTATGGA +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLLLVCA*EFSVYG
Trigger: TCCATAGACGGAAAACTCCCAAGCACAGACCAGCAG...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTAGCTGGGCCTTAATCTaGGCAACAGAAGTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSSWALI*ATEVPP
Trigger: GGGCGGAACTTCTGTTGCCCAGATTAAGGCCCAGCT...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACCCTTCATGCTGGCATTaGAAGAAAGAAGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: RVNAGLASIQRHSGSFDNPSCWH*KKEVFP
Trigger: TGGAAACACTTCTTTCTTCCAATGCCAGCATGAAGG...GTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGACTCTGTACTTCAGCTaGGCTGGTGGAAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQETLYFS*AGGRLS
Trigger: GCTCAGCCTTCCACCAGCCCAGCTGAAGTACAGAGT...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTCAGCAGCCACTCTTTaGTCTCGTTCTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWASAATL*SRSSSS
Trigger: GCTGGAAGAAGAACGAGACCAAAGAGTGGCTGCTGA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGCTGCCTGTGTCTGGCTaGGCTGGGCTTGTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKLPVSG*AGLVKC
Trigger: GCACTTTACAAGCCCAGCTCAGCCAGACACAGGCAG...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTAGCAAGTCAACGACCTaGGCACGGCCCACCAAGGAT +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSSKSTT*ARPTKD
Trigger: ATCCTTGGTGGGCCGTGCTCAGGTCGTTGACTTGCT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTCCAGTTGCTTTACCTaGGCCCTCAATTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLSSCFT*ALNSVT
Trigger: GGTAACAGAATTGAGGGCTCAGGTAAAGCAACTGGA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGATGGATTCCCTTACTTaGATCTGGAGTTGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPMDSLT*IWSCLS
Trigger: GCTAAGGCAACTCCAGATTCAAGTAAGGGAATCCAT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTCTGCCAGAGACTTGGTaGGACGTTCAATGGTACCTC +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSLPETW*DVQWYL
Trigger: GAGGTACCATTGAACGTCTCACCAAGTCTCTGGCAG...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGGACCTTCCAAAAGACTaGATTTGTGCTGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVDLPKD*ICAVRP
Trigger: AGGTCTCACAGCACAAATTCAGTCTTTTGGAAGGTC...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAGGGCTGGTGGAAGGCTaGGCTGCAGACCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRGLVEG*AADLCF
Trigger: GAAGCAGAGGTCTGCAGCTCAGCCTTCCACCAGCCC...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTTCTCTTCCAGTAGCTaGGAGAAGTTGCTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPFSSSS*EKLLFS
Trigger: ACTGAACAGCAACTTCTCTCAGCTACTGGAAGAGAA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTGTGCTCTAACCGTCTaGTCTGCTCCTCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKCALTV*SAPRPQ
Trigger: CTGTGGCCGAGGAGCAGATCAGACGGTTAGAGCACA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGAGTCAGACTCCTGGCTaGGAGTCAATGCCTAATATT +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSQTPG*ESMPNI
Trigger: AATATTAGGCATTGACTCTCAGCCAGGAGTCTGACT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTAAGATCTATTCACGCCTGCAGCTCTTaGACCTGCTTCTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: FHPTPLRVLRQLLLVRSIHACSS*TCFSKT
Trigger: AGTCTTGGAGAAGCAGGTTCAAGAGCTGCAGGCGTG...AATAGATCTTACAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491690.1
CDS-3UTR GCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGCTGTGCAGGTTGTTCTaGCTGTGCCTGAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLLCRLF*LCLSKL
Trigger: CAGCTTACTCAGGCACAGGCAGAACAACCTGCACAG...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGCTCTGTAGAACTCTGTaGAGGTTGTTCTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWLCRTL*RLFCLC
Trigger: GCACAGGCAGAACAACCTGCACAGAGTTCTACAGAG...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGCTGTGCAGCTTGCTCTaGCTGTGTCTGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKLCSLL*LCLAEL
Trigger: CAGCTCAGCCAGACACAGGCAGAGCAAGCTGCACAG...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTGGGCTTGGCCTGCTTaGTCAAACTGTTCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPWAWPA*SNCSKR
Trigger: TCTTTTAGAACAGTTTGAGCAAGCAGGCCAAGCCCA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAATCTACCACTCTCTTCTaGAAAGAAGCAATATTCTCC +
Preference number: 4 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQSTTLF*KEAIFS
Trigger: GGAGAATATTGCTTCTTTGCAGAAGAGAGTGGTAGA...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCATGCCTTACACGTTCTaGCCCCTCAAGCACTTCACT +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSMPYTF*PLKHFT
Trigger: AGTGAAGTGCTTGAGGGGGCAGAACGTGTAAGGCAT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCATTCCTGCTGGTCTGTaGTTGGGAGTTTTCCGTCTA +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAIPAGL*LGVFRL
Trigger: TAGACGGAAAACTCCCAAGCACAGACCAGCAGGAAT...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTACAGAAGTTCCGCCCTaGAGAGCACTCGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSTEVPP*RALASS
Trigger: TGAAGATGCGAGTGCTCTGCAGGGCGGAACTTCTGT...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTCTTGTTTGCCTCTGTaGTTCTTAACTTGCCATACA +
Preference number: 4 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLSCLPL*FLTCHT
Trigger: TGTATGGCAAGTTAAGAAGCACAGAGGCAAACAAGA...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTCTTGCTCAGCTTCCTaGAACTGCTTTTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLSCSAS*NCFSVS
Trigger: GGAGACAGAAAAGCAGTTGCAGGAAGCTGAGCAAGA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCGTATCTCCTGCAGGGTaGACCTCTGCCCTAAGCCGG +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFVSPAG*TSALSR
Trigger: CCGGCTTAGGGCAGAGGTGCACCCTGCAGGAGATAC...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTTTAGCTGTATCTCCTaGAGGGTGCACCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSFSCIS*RVHLCP
Trigger: AGGGCAGAGGTGCACCCTGCAGGAGATACAGCTAAA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGATACTCAGAGAGTCTTaGTCTTCAGTCTCACCTGGT +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPILRES*SSVSPG
Trigger: ACCAGGTGAGACTGAAGAGCAAGACTCTCTGAGTAT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGCTGCTTGTGCCTTTTTaGGGTGTTCAACTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLLLVPF*GVQLLE
Trigger: CTCAAGCAGTTGAACACCGCAAAAAGGCACAAGCAG...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGATATCAGCCTCTTGCTaGCTTATGATCCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPISASC*LMIPSK
Trigger: CTTGGAAGGGATCATAAGGCAGCAAGAGGCTGATAT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGATATCAGCCTCTTGCTaGCTTATGATCCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVISASC*LMIPSK
Trigger: CTTGGAAGGGATCATAAGGCAGCAAGAGGCTGATAT...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTGGTGGAAGGCTGAGCTaGAGACCTCTGCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSGGRLS*RPLLPF
Trigger: GAAGGGAAGCAGAGGTCTGCAGCTCAGCCTTCCACC...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGGCTTCAGAAAAGCTTTaGTGCGGTTCCCTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLASEKL*CGSLSS
Trigger: GGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGC...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTGAATGACAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTGGAGTTGCCTTAGCTaGTCTCCAATATTCTCATTT +
Preference number: 4 (lower is better)
Translates to: VNDRVNAGLASIQRHSGSWSCLS*SPIFSF
Trigger: AAATGAGAATATTGGAGACCAGCTAAGGCAACTCCA...GGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTGTCATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTCTATTTCCTTCAGCTaGGCCTTAATCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSISFS*ALIWAT
Trigger: TGTTGCCCAGATTAAGGCCCAGCTGAAGGAAATAGA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCTTCATGCAGCCTACTaGTCAGTTCTCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQELHAAY*SVLWRP
Trigger: AGGCCTCCAGAGAACTGACCAGTAGGCTGCATGAAG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGAGCTATTCTCCTCAGTaGAGTTCATTGAAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSYSPQ*SSLKRR
Trigger: CCGCCTTTTCAATGAACTCCACTGAGGAGAATAGCT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGAGTTGCTCCTCTGACTaGGGTTCTGTAGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLSCSSD*GSVGRT
Trigger: TGTTCTGCCTACAGAACCTCAGTCAGAGGAGCAACT...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGATCTGCTGTAACTGCTaGGAGAGAATCTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLICCNC*ERIWFL
Trigger: GAGAAACCAGATTCTCTCTCAGCAGTTACAGCAGAT...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCTGAATGGTCTGGGCTaGCTGAACTGCTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQELNGLG*LNCLLI
Trigger: AATGAGCAAGCAGTTCAGTCAGCCCAGACCATTCAG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAATCTAGGAGAGTAATCTaGGAAGACAGTTTTTCATTC +
Preference number: 4 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQSRRVI*EDSFSF
Trigger: GAATGAAAAACTGTCTTCTCAGATTACTCTCCTAGA...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTGCTAGAAGTGGCACTCGGGTCCGTGAATGACAGAGTGAACGCAGGACTCGCTATTTCTTGTGCTTTATaGAAGTTTAGCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLEVALGSVNDRVNAGLAISCAL*KFSSSS
Trigger: GGAGCTCGAGCTAAACTTTCATAAAGCACAAGAAAT...AGCGAGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGTGCCACTTCTAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTATGGATCTGTTCAGTaGGCAGGTTGTCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSYGSVQ*AGCHGQ
Trigger: CTGCCCATGACAACCTGCTCACTGAACAGATCCATA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGGAGCTGCTGAGACTCTaGTTTTCCAATAAAGACCTG +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLELLRL*FSNKDL
Trigger: CAGGTCTTTATTGGAAAATCAGAGTCTCAGCAGCTC...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGCTTCCACCACATGCTaGATCCTTTCTGCTTCATTA +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAASTTC*ILSASL
Trigger: TAATGAAGCAGAAAGGATTCAGCATGTGGTGGAAGC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGGTGTTCCCTCTTCAGTaGCATTCGTTTGGTTATCAT +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPVFPLQ*HSFGYH
Trigger: ATGATAACCAAACGAATGTCACTGAAGAGGGAACAC...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGGCACTAATTTTCTCTTaGTACCTGATGCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPALIFS*YLMQSF
Trigger: GAAGGACTGCATCAGGTATCAAGAGAAAATTAGTGC...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTGCTAGAAGTGGCACTCGGGTCCGTGAATGACAGAGTGAACGCAGGACTCGCTCTGAACTTAGAATTTTaGATATCAGCCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLEVALGSVNDRVNAGLALNLEF*ISASCC
Trigger: GCAGCAAGAGGCTGATATTCAAAATTCTAAGTTCAG...AGCGAGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGTGCCACTTCTAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGCAGCAGCCTCTTGGATaGGTTGGTCTTTTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWQQPLG*VGLFPR
Trigger: TCTTGGAAAAAGACCAACTCATCCAAGAGGCTGCTG...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGAGTTGTGAGGACAAGTaGAGCAATTGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSCEDK*SNCSSL
Trigger: CAAAGATGAGCAATTGCTTCACTTGTCCTCACAACT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCAGCTCATTCCACAGGTaGTCTCTCTCATTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSSSFHR*SLSFCR
Trigger: TCTGCAGAATGAGAGAGATCACCTGTGGAATGAGCT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCGGGCTGGTGGAAGGCTaGGCTGCAGACCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLGLVEG*AADLCF
Trigger: GAAGCAGAGGTCTGCAGCTCAGCCTTCCACCAGCCC...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGCTTAACTCCTTTTGGTaGATTTCCTTTAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLLNSFW*ISFKLS
Trigger: TGACAGCTTAAAGGAAATTCACCAAAAGGAGTTAAG...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR TCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTTCTCTTCCAGTAGCTaGGAGAAGTTGCTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAFSSSS*EKLLFS
Trigger: ACTGAACAGCAACTTCTCTCAGCTACTGGAAGAGAA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGCCCGCCTGCAGCTCTTaGACCTGCTTCTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKPACSS*TCFSKT
Trigger: AGTCTTGGAGAAGCAGGTTCAAGAGCTGCAGGCGGG...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATGTGCTCTAACCGTCTaGTCTGCTCCTCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRCALTV*SAPRPQ
Trigger: CTGTGGCCGAGGAGCAGATCAGACGGTTAGAGCACA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCAACAGTGCCTGCTCCTaGGTGCCACAGGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFNSACS*VPQEPM
Trigger: CATTGGCTCCTGTGGCACTCAGGAGCAGGCACTGTT...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAAACAGTGCCTGCTCCTaGGTGCCACAGGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPNSACS*VPQEPM
Trigger: CATTGGCTCCTGTGGCACTCAGGAGCAGGCACTGTT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTACTCGGGTCCGTGAATaGCAGAGTGAACGCAGGACT +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSTRVRE*QSERRT
Trigger: AGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTCGGGTCCGTGAATaGCAGAGTGAACGCAGGACT +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKTRVRE*QSERRT
Trigger: AGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGACCGCCTGCAGCTCTTaGACCTGCTTCTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQTACSS*TCFSKT
Trigger: AGTCTTGGAGAAGCAGGTTCAAGAGCTGCAGGCGGT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393667.7
CDS-3UTR GCA 90 bp GCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTGTGAACTCCATTCTTTTCTGTGCAGGTTGTTCTaGCTGTGCCTGAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: AAVPLVPQGHSFCELHSFLCRLF*LCLSKL
Trigger: CAGCTTACTCAGGCACAGGCAGAACAACCTGCACAG...AAAAGAATGGAGTTCACAGAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCCTGTGCAGCTTGCTCTaGCTGTGTCTGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVILCSLL*LCLAEL
Trigger: CAGCTCAGCCAGACACAGGCAGAGCAAGCTGCACAG...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATTCTCTCGGACCACCTaGTGTGCAGCTTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPFSRTT*CAACSA
Trigger: GGCAGAGCAAGCTGCACAGCAGGTGGTCCGAGAGAA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340645.9
CDS-3UTR GCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGGCATCACAGGCAGACTaGAGCTCTTGTCCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEASQAD*SSCPVF
Trigger: AAAGACTGGACAAGAGCTGCAGTCTGCCTGTGATGC...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGCTGTTCTTTTTCAACTaGTGGAAGACTGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVLFFFN*WKTALF
Trigger: GAAGAGAGCAGTCTTCCAGCAGTTGAAAAAGAACAG...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGAGACAAAGCAGTGAATaGACTGCTGTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLRQSSE*TAVVVS
Trigger: GCTGACAACAACAGCAGTGCATTCACTGCTTTGTCT...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGACCAGAGCCTGGAATTaGTCTTCAGCTGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLTRAWN*SSAASF
Trigger: AAAGCTGGCAGCTGAAGAGCAATTCCAGGCTCTGGT...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTGAAGAACACGATTCCTaGTGGTCTGTGCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSEEHDS*WSVLGS
Trigger: ACTCCCAAGCACAGACCAGCAGGAATCGTGTTCTTC...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTTTATCCTCTCATCATaGTCTTTGGCTTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: RVNAGLASIQRHSGSFDNFILSS*SLACIS
Trigger: AGAAATGCAAGCCAAAGAGCATGATGAGAGGATAAA...GTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGAGTTCCACCTGTAGCTaGTTTATCCTCTCATCATGC +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLSSTCS*FILSSC
Trigger: GCATGATGAGAGGATAAAGCAGCTACAGGTGGAACT...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTTGGCTTTCCACATCTaGCAGAGACTTGGTGAGACG +
Preference number: 4 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFLAFHI*QRLGET
Trigger: CGTCTCACCAAGTCTCTGGCAGATGTGGAAAGCCAA...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATGCAGGGTGCACCTCTaGCCTAAGCCGGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPCRVHL*PKPVIL
Trigger: GAGAATGACCGGCTTAGGGCAGAGGTGCACCCTGCA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTGTATCTCCTGCAGGGTaGACCTCTGCCCTAAGCCGG +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVVSPAG*TSALSR
Trigger: CCGGCTTAGGGCAGAGGTGCACCCTGCAGGAGATAC...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCTCTTAGTAAAGGCTaGAAGCTGGGTCACAGTACT +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWALSKG*KLGHST
Trigger: AGTACTGTGACCCAGCTTGCAGCCTTTACTAAGAGC...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAAAAAGGAATCCAACTGTaGCTTTTGCTGAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQKGIQL*LLLNVF
Trigger: GAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTT...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTGTAAGTATTGCTGCTaGAGATTCTTCAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLCKYCC*RFFNSF
Trigger: GAAGGAATTGAAGAATCTGCAGCAGCAATACTTACA...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCCAGGAGAGGTTTTCCTaGCTGAGCTCTTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSQERFS*LSSSCI
Trigger: TATGCAAGAAGAGCTCAGGCAGGAAAACCTCTCCTG...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTAAGATCTATTTCTAACCGTCTGATCTaGTCCTCGGCCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FHPTPLRVLRQLLLVRSISNRLI*SSATER
Trigger: TCTCTCTGTGGCCGAGGAGCAGATCAGACGGTTAGA...AATAGATCTTACAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR GCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGGAGTCCCATTCACTGTaGTCTAACCGTCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEESHSL*SNRLIC
Trigger: GCAGATCAGACGGTTAGAGCACAGTGAATGGGACTC...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCATAGACACTTCTCCCTaGCCTTTGGTGAAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAIDTSP*PLVKGK
Trigger: CTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTAT...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGATAGACACTTCTCCCTaGCCTTTGGTGAAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLIDTSP*PLVKGK
Trigger: CTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTAT...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGCTCAACTGTGCAGCTTaGTCTGCCTGTGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQLNCAA*SACVWL
Trigger: CAGCCAGACACAGGCAGAGCAAGCTGCACAGTTGAG...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393667.7
CDS-3UTR GCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCATGGAACTCAACTGTaGAGCTTGCTCTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEHGTQL*SLLCLC
Trigger: ACACAGGCAGAGCAAGCTGCACAGTTGAGTTCCATG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393667.7
CDS-3UTR CCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTCCATGTCAGATTCTTaGTGTAATTCAGGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSMSDS*CNSGSR
Trigger: CCTAGACCCTGAATTACACCAAGAATCTGACATGGA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340645.9
ENST00000393667.7
CDS-3UTR CCA 90 bp GTGAATGACAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTTCCAGTAGAATCTTaGACTCCTCTCTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: VNDRVNAGLASIQRHSGSFPVES*TPLFLF
Trigger: AAACAGAAAGAGAGGAGTCCAAGATTCTACTGGAAA...GGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTGTCATTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGGACTCTAGTTCAGCCTaGGCTTGGCCTGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQDSSSA*AWPACS
Trigger: TGAGCAAGCAGGCCAAGCCCAGGCTGAACTAGAGTC...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTGAATGACAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTCAGCCCTTTTTCCCTaGAGCTGTAATTTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: VNDRVNAGLASIQRHSGSSALFP*SCNLRN
Trigger: ATTTCTTAAATTACAGCTCCAGGGAAAAAGGGCTGA...GGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTGTCATTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGACTTATTTGTCCTGCTaGGCTCATCTCATCATAATT +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLTYLSC*AHLIII
Trigger: AATTATGATGAGATGAGCCCAGCAGGACAAATAAGT...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGAGCTGGGCCTTAATCTaGGCAACAGAAGTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKSWALI*ATEVPP
Trigger: GGGCGGAACTTCTGTTGCCCAGATTAAGGCCCAGCT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTCTATTTCCTTCAGCTaGGCCTTAATCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLSISFS*ALIWAT
Trigger: TGTTGCCCAGATTAAGGCCCAGCTGAAGGAAATAGA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTGCAGGCTTTCGGCATaGACTTCAGCTTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQECRLSA*TSASWD
Trigger: ATCCCATGAAGCTGAAGTCCATGCCGAAAGCCTGCA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCTACTTACAGCAGGGTTaGCACTCTTCGCTGATGGAA +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSYLQQG*HSSLME
Trigger: TTCCATCAGCGAAGAGTGCCAACCCTGCTGTAAGTA...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGAGCTGGACCTCTGTCTaGGCCTTGGACTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKSWTSV*ALDSQI
Trigger: GATTTGGGAGTCCAAGGCCCAGACAGAGGTCCAGCT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGTACTGGTCAGTTCTCTaGAGGCCTGAAGATCAGTCT +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWYWSVL*RPEDQS
Trigger: AGACTGATCTTCAGGCCTCCAGAGAACTGACCAGTA...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGTCTGCAGCAGCCTCTTaGATGAGTTGGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSAAAS*MSWSFS
Trigger: GGAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGA...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGGGGGATGCCTGTCTTTaGTATTGCACTTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEGDACL*YCTLRG
Trigger: GCCTCTCAAAGTGCAATACCAAAGACAGGCATCCCC...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCAAGCTGTCATTGAGCTaGGTCCTGAGAAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSKLSLS*VLRSSV
Trigger: GACAGAACTTCTCAGGACCCAGCTCAATGACAGCTT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCCATTCACTTCCTGTCTaGTGTTGCATAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSHSLPV*CCIAAA
Trigger: AGCAGCAGCTATGCAACACCAGACAGGAAGTGAATG...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTCAGCAGCCACTCTTTaGTCTCGTTCTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFSAATL*SRSSSS
Trigger: GCTGGAAGAAGAACGAGACCAAAGAGTGGCTGCTGA...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR CCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGGGAATAGGCACAAATaGAATTCTATCCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAGNRHK*NSILAV
Trigger: GACAGCCAGGATAGAATTCCATTTGTGCCTATTCCC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTGGAGCCCTCATATTCTaGTCAGTGTCATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSGALIF*SVSSSP
Trigger: AGGAGATGATGACACTGATCAGAATATGAGGGCTCC...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTCTTTCTGCTGCAGTTaGACATCCTTCTGTCTAATA +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSFCCS*TSFCLI
Trigger: TATTAGACAGAAGGATGTTCAACTGCAGCAGAAAGA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTGTGAACTCCATTCTTTTAGTTGCTCCTCTGACTaGGGTTCTGTAGGCAGAACA +
Preference number: 4 (lower is better)
Translates to: AAVPLVPQGHSFCELHSFSCSSD*GSVGRT
Trigger: TGTTCTGCCTACAGAACCTCAGTCAGAGGAGCAACT...AAAAGAATGGAGTTCACAGAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTGGTCAAGGACCTCATaGTCTGCTTCCTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQWSRTS*SASSAL
Trigger: AAGGGCTGAGGAAGCAGATCATGAGGTCCTTGACCA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTTGGTCAAGGACCTCATaGTCTGCTTCCTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSWSRTS*SASSAL
Trigger: AAGGGCTGAGGAAGCAGATCATGAGGTCCTTGACCA...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGATTTCTTGTGCTTTATaGAAGTTTAGCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPISCAL*KFSSSS
Trigger: GGAGCTCGAGCTAAACTTTCATAAAGCACAAGAAAT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTTCAAGTTCCTTCTGTaGAAGAGCCTGGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFFKFLL*KSLGQF
Trigger: GAACTGTCCCAGGCTCTTTCACAGAAGGAACTTGAA...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGGCTGTTCTGTGGCTTTaGATAAAGGTTCTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVAVLWL*IKVLLN
Trigger: GTTTAGAAGAACCTTTATTCAAAGCCACAGAACAGC...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCCTCGCATCTTCAGAATaGGAAGGCCAGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVILASSE*EGQSGH
Trigger: GTGCCCAGACTGGCCTTCTCATTCTGAAGATGCGAG...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTCTGCCAGAGACTTGGTaGGACGTTCAATGGTACCTC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSLPETW*DVQWYL
Trigger: GAGGTACCATTGAACGTCTCACCAAGTCTCTGGCAG...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCGCTTCCACCACATGCTaGATCCTTTCTGCTTCATTA +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSASTTC*ILSASL
Trigger: TAATGAAGCAGAAAGGATTCAGCATGTGGTGGAAGC...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTTTCATCATGTGAGCTaGAATCCTTACTTACAGCAG +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPFHHVS*NPYLQQ
Trigger: CTGCTGTAAGTAAGGATTTCAGCTCACATGATGAAA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTTGGTTACTTCCTCCTaGAGCATTTTTAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPLVTSS*SIFSSP
Trigger: TGGTGAACTAAAAATGCTTCAGGAGGAAGTAACCAA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCCGGTGTTCAACTGCTTaGGCCAGATTTTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSRCSTA*ARFSLV
Trigger: AACCAAAGAAAATCTGGCTCAAGCAGTTGAACACCG...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGCGGTGTTCAACTGCTTaGGCCAGATTTTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWRCSTA*ARFSLV
Trigger: AACCAAAGAAAATCTGGCTCAAGCAGTTGAACACCG...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCTTGCTGCTTCACTTTaGGTGTCATCTAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQELAASL*VSSSRT
Trigger: AGTCCTGCTAGATGACACTCAAAGTGAAGCAGCAAG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGGACATCTGTCTAAGTTaGTCCTTTAGAACACTGCAA +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPDICLS*SFRTLQ
Trigger: TTGCAGTGTTCTAAAGGATCAACTTAGACAGATGTC...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTCACAGACCTTCTGCTaGAGCTGGACCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVISQTFC*SWTSVW
Trigger: CCAGACAGAGGTCCAGCTTCAGCAGAAGGTCTGTGA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCTCACAGACCTTCTGCTaGAGCTGGACCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ERRASLSLFKSPCSFNCASQTFC*SWTSVW
Trigger: CCAGACAGAGGTCCAGCTTCAGCAGAAGGTCTGTGA...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTCTTTATCATGTTGCTaGCGCAGTTCAGCAATAGCT +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWASLSCC*RSSAIA
Trigger: AGCTATTGCTGAACTGCGTCAGCAACATGATAAAGA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGCTCAGTGGAGTTCATTaGAAAGGCGGTTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWLSGVH*KGGFRK
Trigger: CTTTCTGAAACCGCCTTTTCAATGAACTCCACTGAG...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCAGTTGTGAGGACAAGTaGAGCAATTGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWASCEDK*SNCSSL
Trigger: CAAAGATGAGCAATTGCTTCACTTGTCCTCACAACT...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGAGCTCATTCCACAGGTaGTCTCTCTCATTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLSSFHR*SLSFCR
Trigger: TCTGCAGAATGAGAGAGATCACCTGTGGAATGAGCT...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATTCTCCATCCTGAGCTaGTGCAGCTCATGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPFSILS*CSSCCQ
Trigger: CTGGCAGCATGAGCTGCATCAGCTCAGGATGGAGAA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCGATTCTGCAGATGACTaGGCTGCTGATCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSDSADD*AADLYL
Trigger: CAGATAAAGATCAGCAGCTCAGTCATCTGCAGAATC...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCTTCTCTTCCAGTAGCTaGGAGAAGTTGCTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSFSSSS*EKLLFS
Trigger: ACTGAACAGCAACTTCTCTCAGCTACTGGAAGAGAA...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCACTCGGGTCCGTGAATaGCAGAGTGAACGCAGGACT +
Preference number: 4 (lower is better)
Translates to: ERRASLSLFKSPCSFNCATRVRE*QSERRT
Trigger: AGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGT...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGACTCGGGTCCGTGAATaGCAGAGTGAACGCAGGACT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKTRVRE*QSERRT
Trigger: AGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGT...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTGAGAATTCCAAGTTTTaGGGGGAGTGGTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSENSKF*GEWSKE
Trigger: CTCTTTGGACCACTCCCCTCAAAACTTGGAATTCTC...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGGAGCCACCTTCCCCCTaGAACAGGAGAAAATACAGG +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKEPPSP*NRRKYR
Trigger: CCTGTATTTTCTCCTGTTTCAGGGGGAAGGTGGCTC...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGAAATCAGATGTCCTATaGGGTGACATGTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPKSDVL*GDMFIS
Trigger: GGAAATGAACATGTCACCTCATAGGACATCTGATTT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGCCCTCCAATTATATCTaGAATTGGCAGGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLPSNYI*NWQGRR
Trigger: TCTTCTTCCCTGCCAATTTCAGATATAATTGGAGGG...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGAGTCAGACTCCTGGCTaGGAGTCAATGCCTAATATT +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSQTPG*ESMPNI
Trigger: AATATTAGGCATTGACTCTCAGCCAGGAGTCTGACT...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACACCACCAATTGCTCTaGATAAGCCAGGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPHHQLL*ISQALL
Trigger: CAGGAGCGCCTGGCTTATGCAGAGCAATTGGTGGTG...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGCTGTGCAGGTTGTTCTaGCTGTGCCTGAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQLCRLF*LCLSKL
Trigger: CAGCTTACTCAGGCACAGGCAGAACAACCTGCACAG...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTGTGAACTCCATTCTTTTCTCTGTAGAACTCTGTaGAGGTTGTTCTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: AAVPLVPQGHSFCELHSFLCRTL*RLFCLC
Trigger: GCACAGGCAGAACAACCTGCACAGAGTTCTACAGAG...AAAAGAATGGAGTTCACAGAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGACTGTGCAGCTTGCTCTaGCTGTGTCTGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRLCSLL*LCLAEL
Trigger: CAGCTCAGCCAGACACAGGCAGAGCAAGCTGCACAG...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTACCTGCTGTGCAGCTTaGTCTGCCTGTGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVTCCAA*SACVWL
Trigger: CAGCCAGACACAGGCAGAGCAAGCTGCACAGCAGGT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340645.9
CDS-3UTR GCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGCAACTGCTGGAAGACTaGTCTCTTCATTTGGCATTA +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLQLLED*SLHLAL
Trigger: TAATGCCAAATGAAGAGAGCAGTCTTCCAGCAGTTG...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGCTAGAAGTGGCACTCGGGTCCGTGAATGACAGAGTGAACGCAGGACTCGCTTACTTTGATGTTCAGTaGTCGCCTGTTCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LLEVALGSVNDRVNAGLAYFDVQ*SPVLFQ
Trigger: TTGAAAAAGAACAGGCGAGCACTGAACATCAAAGTA...AGCGAGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGTGCCACTTCTAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAAAAATCCTTCCTTATATaGTGTAGTTCCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQKSFLI*CSSTSF
Trigger: GAAAGAAGTGGAACTACAGCATATAAGGAAGGATTT...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGACCAGAGCCTGGAATTaGTCTTCAGCTGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: RLGETFNGTSGQRQFLLETRAWN*SSAASF
Trigger: AAAGCTGGCAGCTGAAGAGCAATTCCAGGCTCTGGT...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCGGAGTCCCCATCACTTaGATCCGTGTTACTTGTGAT +
Preference number: 4 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFGVPIT*IRVTCD
Trigger: ATCACAAGTAACACGGATGCAAGTGATGGGGACTCC...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTACAGAAGTTCCGCCCTaGAGAGCACTCGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSTEVPP*RALASS
Trigger: TGAAGATGCGAGTGCTCTGCAGGGCGGAACTTCTGT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGACAGAAGTTCCGCCCTaGAGAGCACTCGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKTEVPP*RALASS
Trigger: TGAAGATGCGAGTGCTCTGCAGGGCGGAACTTCTGT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTCATGCTCTTTGGCTTaGATTTCTAGCTGTGTATGC +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWASCSLA*ISSCVC
Trigger: GCATACACAGCTAGAAATGCAAGCCAAAGAGCATGA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGAGTTCCACCTGTAGCTaGTTTATCCTCTCATCATGC +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSSTCS*FILSSC
Trigger: GCATGATGAGAGGATAAAGCAGCTACAGGTGGAACT...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTGTATCTCCTGCAGGGTaGACCTCTGCCCTAAGCCGG +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLVSPAG*TSALSR
Trigger: CCGGCTTAGGGCAGAGGTGCACCCTGCAGGAGATAC...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTCTGCTTGTGCCTTTTTaGGGTGTTCAACTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSLLVPF*GVQLLE
Trigger: CTCAAGCAGTTGAACACCGCAAAAAGGCACAAGCAG...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGCAGGTGCTTCTCTTCTaGCTGTTCCAGTCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKQVLLF*LFQSSL
Trigger: GAGCGAAGACTGGAACAGGCAGAAGAGAAGCACCTG...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGATTTCTCATTATCCCTaGATCATGATGAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLISHYP*IMMKML
Trigger: AAGCATCTTCATCATGATGCAGGGATAATGAGAAAT...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGTAGCTGAGAGAAGTTaGTGTTCAGTTGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAVAERS*CSVAEF
Trigger: GAATTCAGCAACTGAACAGCAACTTCTCTCAGCTAC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCTAACCGTCTGATCTaGTCCTCGGCCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQSNRLI*SSATER
Trigger: TCTCTCTGTGGCCGAGGAGCAGATCAGACGGTTAGA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGAACTCTTGTCATGCTTaGAAAGTTGCTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLNSCHA*KVAPLT
Trigger: AGTCAGAGGAGCAACTTTCCAAGCATGACAAGAGTT...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTGTGTCTGGCTGAGCTaGGCTTGTAAAGTGCTAATG +
Preference number: 4 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFCVWLS*ACKVLM
Trigger: CATTAGCACTTTACAAGCCCAGCTCAGCCAGACACA...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTCCTTATTTTGCAGCTaGCTTTGCAGGCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLSLFCS*LCRLLI
Trigger: GATAAGAAGCCTGCAAAGCCAGCTGCAAAATAAGGA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGATCCTTCTCCTCGATaGTTTGTTGGAGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLDPSPR*FVGGFP
Trigger: TGGAAACCCTCCAACAAACCATCGAGGAGAAGGATC...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTTGCTTCCTCAGCTCTaGATAATAAATTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLLLPQL*IINLAV
Trigger: AACAGCTAAATTTATTATCCAGAGCTGAGGAAGCAA...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGTGTTTGACCAGAGCCTaGAATTGCTCTTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RLGETFNGTSGQRQFLLECLTRA*NCSSAA
Trigger: GGCAGCTGAAGAGCAATTCCAGGCTCTGGTCAAACA...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTGAACACGATTCCTGCTaGTCTGTGCTTGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSEHDSC*SVLGSF
Trigger: AAAACTCCCAAGCACAGACCAGCAGGAATCGTGTTC...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAGCTGGGCCTTAATCTaGGCAACAGAAGTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKSWALI*ATEVPP
Trigger: GGGCGGAACTTCTGTTGCCCAGATTAAGGCCCAGCT...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCTCTATTTCCTTCAGCTaGGCCTTAATCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSSISFS*ALIWAT
Trigger: TGTTGCCCAGATTAAGGCCCAGCTGAAGGAAATAGA...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCCCTTCATGCTGGCATTaGAAGAAAGAAGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAPSCWH*KKEVFP
Trigger: TGGAAACACTTCTTTCTTCCAATGCCAGCATGAAGG...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTACTTACAGCAGGGTTaGCACTCTTCGCTGATGGAA +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSYLQQG*HSSLME
Trigger: TTCCATCAGCGAAGAGTGCCAACCCTGCTGTAAGTA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAAGCTGGACCTCTGTCTaGGCCTTGGACTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRSWTSV*ALDSQI
Trigger: GATTTGGGAGTCCAAGGCCCAGACAGAGGTCCAGCT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGAGCTGGACCTCTGTCTaGGCCTTGGACTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKSWTSV*ALDSQI
Trigger: GATTTGGGAGTCCAAGGCCCAGACAGAGGTCCAGCT...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTCTTCATGCAGCCTACTaGTCAGTTCTCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSLHAAY*SVLWRP
Trigger: AGGCCTCCAGAGAACTGACCAGTAGGCTGCATGAAG...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGCTTCATGCAGCCTACTaGTCAGTTCTCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQLHAAY*SVLWRP
Trigger: AGGCCTCCAGAGAACTGACCAGTAGGCTGCATGAAG...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCTCAGCAATAGCTACTTaGATTGCCTCTTCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSSAIAT*IASSLP
Trigger: TGGCAAGGAAGAGGCAATCCAAGTAGCTATTGCTGA...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTCTGCAGCAGCCTCTTaGATGAGTTGGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQESAAAS*MSWSFS
Trigger: GGAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGAGGTCTTCTCTATATTaGATCAGTTCTGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVRSSLY*ISSASS
Trigger: GCTAGATGCAGAACTGATCCAATATAGAGAAGACCT...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGAGCTATTCTCCTCAGTaGAGTTCATTGAAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSYSPQ*SSLKRR
Trigger: CCGCCTTTTCAATGAACTCCACTGAGGAGAATAGCT...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAACTCTGTACTTCAGCTaGGCTGGTGGAAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPTLYFS*AGGRLS
Trigger: GCTCAGCCTTCCACCAGCCCAGCTGAAGTACAGAGT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGACTCTGTACTTCAGCTaGGCTGGTGGAAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLTLYFS*AGGRLS
Trigger: GCTCAGCCTTCCACCAGCCCAGCTGAAGTACAGAGT...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp TTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTAAGATCTATTTCAGCAGCCACTCTTTaGTCTCGTTCTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FHPTPLRVLRQLLLVRSISAATL*SRSSSS
Trigger: GCTGGAAGAAGAACGAGACCAAAGAGTGGCTGCTGA...AATAGATCTTACAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR CCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTACCATCCTCTTGGCTTaGCTGAAAGACATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSTILLA*LKDIPQ
Trigger: CTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGT...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGACCATCCTCTTGGCTTaGCTGAAAGACATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLTILLA*LKDIPQ
Trigger: CTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGT...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR CAA 72 bp GCCCACCAAGGATTCTTCGTGTTCCTCAAGCTTCCTTaGCAGCACCCTCAATTTCTGTTGCATCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: AHQGFFVFLKLP*QHPQFLLHLCF
Trigger: GAAACAGAGATGCAACAGAAATTGAGGGTGCTGCAAAGGAAGCTTGAGGAACACGAAGAATCCTTGGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp TCTGTGAAAGAGCCTGGGACAGTTCTTCCACTTTACTaGAGATATGCCTTACACGTTCTGCCCCCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: SVKEPGTVLPLY*RYALHVLPPQA
Trigger: TGCTTGAGGGGGCAGAACGTGTAAGGCATATCTCAAGTAAAGTGGAAGAACTGTCCCAGGCTCTTTCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp CTGGAGTGGAAGAACACGATTCCTGCTGGTCTGTGCTaGGGAGTTTTCCGTCTATGGATTCCCTTACTTGAA +
Preference number: 4 (lower is better)
Translates to: LEWKNTIPAGLC*GVFRLWIPLLE
Trigger: TTCAAGTAAGGGAATCCATAGACGGAAAACTCCCAAGCACAGACCAGCAGGAATCGTGTTCTTCCACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCAGAAGCTCATCTTCATaGAGACGAACTTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWARSSSS*RRTCVS
Trigger: TGAAACACAAGTTCGTCTTCATGAAGATGAGCTTCT...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340645.9
ENST00000393667.7
CDS-3UTR TCA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCATCTGCTGTAACTGCTaGGAGAGAATCTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFICCNC*ERIWFL
Trigger: GAGAAACCAGATTCTCTCTCAGCAGTTACAGCAGAT...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGCTGAATGGTCTGGGCTaGCTGAACTGCTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQLNGLG*LNCLLI
Trigger: AATGAGCAAGCAGTTCAGTCAGCCCAGACCATTCAG...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGAATGCAATTTCCTCTTaGGCTTCTTTCATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPNAISS*ASFISN
Trigger: GTTGGAAATGAAAGAAGCTCAAGAGGAAATTGCATT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTGGTCAAGGACCTCATaGTCTGCTTCCTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIWSRTS*SASSAL
Trigger: AAGGGCTGAGGAAGCAGATCATGAGGTCCTTGACCA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCTGGTCAAGGACCTCATaGTCTGCTTCCTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: ERRASLSLFKSPCSFNCAWSRTS*SASSAL
Trigger: AAGGGCTGAGGAAGCAGATCATGAGGTCCTTGACCA...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTCAGATGTTCTACTTTaGTGTTCAGTGCTCGCCTGT +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLSDVLL*CSVLAC
Trigger: ACAGGCGAGCACTGAACATCAAAGTAGAACATCTGA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTCAGATGTTCTACTTTaGTGTTCAGTGCTCGCCTGT +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQESDVLL*CSVLAC
Trigger: ACAGGCGAGCACTGAACATCAAAGTAGAACATCTGA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCTTCTTCCAATCTACTaGCTCTTTGCAGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQELLPIY*LFAEAP
Trigger: AGGAGCTTCTGCAAAGAGTCAGTAGATTGGAAGAAG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTCTTCTTCCAATCTACTaGCTCTTTGCAGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSLLPIY*LFAEAP
Trigger: AGGAGCTTCTGCAAAGAGTCAGTAGATTGGAAGAAG...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTTGCTTGGTTTTCACTaGTTTCTGCTTGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWALLGFH*FLLGAN
Trigger: ATTTGCTCCAAGCAGAAATCAGTGAAAACCAAGCAA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGACTCGCATCTTCAGAATaGGAAGGCCAGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRLASSE*EGQSGH
Trigger: GTGCCCAGACTGGCCTTCTCATTCTGAAGATGCGAG...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGCAGCAATTCTTTCTTTaGGCTGATCAATCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLQQFFL*ADQSAV
Trigger: TACAGCAGATTGATCAGCTCAAAGAAAGAATTGCTG...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCGCACTAATTTTCTCTTaGTACCTGATGCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSALIFS*YLMQSF
Trigger: GAAGGACTGCATCAGGTATCAAGAGAAAATTAGTGC...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTAGTTCTCTGGAGGCCTaGAGATCAGTCTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSSSLEA*RSVSSC
Trigger: ACAACTGGAGACTGATCTTCAGGCCTCCAGAGAACT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGAGTTCTCTGGAGGCCTaGAGATCAGTCTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQSSLEA*RSVSSC
Trigger: ACAACTGGAGACTGATCTTCAGGCCTCCAGAGAACT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTTGAGATCATCCATATaGCTTCTCAAGCCTCGTATT +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWALRSSI*LLKPRI
Trigger: AATACGAGGCTTGAGAAGTCATATGGATGATCTCAA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCTCAGTGGAGTTCATTaGAAAGGCGGTTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQELSGVH*KGGFRK
Trigger: CTTTCTGAAACCGCCTTTTCAATGAACTCCACTGAG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGCTGCTGATCTTTATCTaGGATAGCCATAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWLLIFI*DSHKVL
Trigger: CAGTACCTTATGGCTATCTCAGATAAAGATCAGCAG...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTGCACTTTGAGAGGCTaGGTCTGGGAGGAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKCTLRG*VWEEED
Trigger: GTCTTCTTCCTCCCAGACTCAGCCTCTCAAAGTGCA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCCTCACCCTCCATCTGTTTCATTTCTTTCTGGTCAAGGACCTCATGATCTGTTTGGTATTGCACTTTaGGAGGCTGAGTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: FPHPPSVSFLSGQGPHDLFGIAL*EAESGR
Trigger: CCTCCCAGACTCAGCCTCTCAAAGTGCAATACCAAA...CAGATCATGAGGTCCTTGACCAGAAAGAAATGAAACAGATGGAGGGTGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTTGTGCTCTAACCGTCTaGTCTGCTCCTCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLCALTV*SAPRPQ
Trigger: CTGTGGCCGAGGAGCAGATCAGACGGTTAGAGCACA...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATGCAGGCACTTTCCGTaGAGAGTTGGAGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRCRHFP*RVGEKT
Trigger: GGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGGAGCCACCTTCCCCCTaGAACAGGAGAAAATACAGG +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKEPPSP*NRRKYR
Trigger: CCTGTATTTTCTCCTGTTTCAGGGGGAAGGTGGCTC...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGAGAATCTGGTTTCTCTaGTCAGCAGCAGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQRIWFL*SAAVSS
Trigger: GGAGCTGACTGCTGCTGAGCAGAGAAACCAGATTCT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTCTGCTTTGTGCTTCTaGTCCAAAGCACTATACCGA +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSSALCF*SKALYR
Trigger: TCGGTATAGTGCTTTGGAGCAGAAGCACAAAGCAGA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGGCATCACAGGCAGACTaGAGCTCTTGTCCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKASQAD*SSCPVF
Trigger: AAAGACTGGACAAGAGCTGCAGTCTGCCTGTGATGC...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTCTTCTTTGCCTTTCTaGTTCTGCAAGGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWASSLPF*FCKVHF
Trigger: GAAATGAACCTTGCAGAAGCAGAAAGGCAAAGAAGA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGACTTTACTTGAGATATaGCTTACACGTTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQETLLEI*LTRSAP
Trigger: GGGGGCAGAACGTGTAAGGCATATCTCAAGTAAAGT...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGACCAGAGCCTGGAATTaGTCTTCAGCTGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKTRAWN*SSAASF
Trigger: AAAGCTGGCAGCTGAAGAGCAATTCCAGGCTCTGGT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTGTGAACTCCATTCTTTTCTTTCCAATTTCTGCTaGAGGCTTTCGGCATGGACT +
Preference number: 4 (lower is better)
Translates to: AAVPLVPQGHSFCELHSFLSNFC*RLSAWT
Trigger: AGTCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAG...AAAAGAATGGAGTTCACAGAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTCTGCTTTCCAATTTCTaGTGCAGGCTTTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSLLSNF*CRLSAW
Trigger: CCATGCCGAAAGCCTGCAGCAGAAATTGGAAAGCAG...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGAGTTCCACCTGTAGCTaGTTTATCCTCTCATCATGC +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLSSTCS*FILSSC
Trigger: GCATGATGAGAGGATAAAGCAGCTACAGGTGGAACT...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTGCAGGGTGCACCTCTaGCCTAAGCCGGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLCRVHL*PKPVIL
Trigger: GAGAATGACCGGCTTAGGGCAGAGGTGCACCCTGCA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTTTAGCTGTATCTCCTaGAGGGTGCACCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFFSCIS*RVHLCP
Trigger: AGGGCAGAGGTGCACCCTGCAGGAGATACAGCTAAA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTTTAGCTGTATCTCCTaGAGGGTGCACCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKFSCIS*RVHLCP
Trigger: AGGGCAGAGGTGCACCCTGCAGGAGATACAGCTAAA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGATACTCAGAGAGTCTTaGTCTTCAGTCTCACCTGGT +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEILRES*SSVSPG
Trigger: ACCAGGTGAGACTGAAGAGCAAGACTCTCTGAGTAT...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTTTGCGGTGTTCAACTaGTTGAGCCAGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAFAVFN*LSQIFF
Trigger: AAAGAAAATCTGGCTCAAGCAGTTGAACACCGCAAA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGCAGGTGCTTCTCTTCTaGCTGTTCCAGTCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKQVLLF*LFQSSL
Trigger: GAGCGAAGACTGGAACAGGCAGAAGAGAAGCACCTG...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTAAGATCTATTGCTCTTAGTAAAGGCTaGAAGCTGGGTCACAGTACT +
Preference number: 4 (lower is better)
Translates to: FHPTPLRVLRQLLLVRSIALSKG*KLGHST
Trigger: AGTACTGTGACCCAGCTTGCAGCCTTTACTAAGAGC...AATAGATCTTACAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGATATCAGCCTCTTGCTaGCTTATGATCCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLISASC*LMIPSK
Trigger: CTTGGAAGGGATCATAAGGCAGCAAGAGGCTGATAT...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCAATAGCTACTTGGATTaGCTCTTCCTTGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSNSYLD*LFLARK
Trigger: CTTTCTGGCAAGGAAGAGGCAATCCAAGTAGCTATT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGAAAGGAATCCAACTGTaGCTTTTGCTGAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPKGIQL*LLLNVF
Trigger: GAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGATAGTCACCCACTATaGGGTCTCGATCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLDSHPL*GLDHFG
Trigger: TCCAAAATGATCGAGACCGCATAGTGGGTGACTATC...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGAAAGTACCTTCTTCTTaGAAGGCTGTTACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVKVPSS*KAVTCL
Trigger: AAGACAAGTAACAGCCTTGCAAGAAGAAGGTACTTT...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTGTAAGTATTGCTGCTaGAGATTCTTCAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPCKYCC*RFFNSF
Trigger: GAAGGAATTGAAGAATCTGCAGCAGCAATACTTACA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGATCTGTAAGTATTGCTaGTGCAGATTCTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPICKYC*CRFFNS
Trigger: GGAATTGAAGAATCTGCAGCAGCAATACTTACAGAT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTCAGAAAAGCTTTGCTaGGGTTCCCTTAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLSEKLC*GSLSSS
Trigger: TGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTCAGAAAAGCTTTGCTaGGGTTCCCTTAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQESEKLC*GSLSSS
Trigger: TGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTCAGAAAAGCTTTGCTaGGGTTCCCTTAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFSEKLC*GSLSSS
Trigger: TGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGA...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR GCA 90 bp GCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTGTGAACTCCATTCTTTTGCTTCAGAAAAGCTTTaGTGCGGTTCCCTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: AAVPLVPQGHSFCELHSFASEKL*CGSLSS
Trigger: GGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGC...AAAAGAATGGAGTTCACAGAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATCTAACCGTCTGATCTaGTCCTCGGCCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPSNRLI*SSATER
Trigger: TCTCTCTGTGGCCGAGGAGCAGATCAGACGGTTAGA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTGTTTGACCAGAGCCTaGAATTGCTCTTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQCLTRA*NCSSAA
Trigger: GGCAGCTGAAGAGCAATTCCAGGCTCTGGTCAAACA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTTGTTTGACCAGAGCCTaGAATTGCTCTTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSCLTRA*NCSSAA
Trigger: GGCAGCTGAAGAGCAATTCCAGGCTCTGGTCAAACA...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTCTATTTCCTTCAGCTaGGCCTTAATCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLSISFS*ALIWAT
Trigger: TGTTGCCCAGATTAAGGCCCAGCTGAAGGAAATAGA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTGCAGGCTTTCGGCATaGACTTCAGCTTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKCRLSA*TSASWD
Trigger: ATCCCATGAAGCTGAAGTCCATGCCGAAAGCCTGCA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGTCTCATCATGCTCTTTaGCTTGCATTTCTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSHHAL*LAFLAV
Trigger: CACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGA...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCATTGTCTCTTCCAAGTaGACTTTTTCTCTGCGCAAA +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAIVSSK*TFSLRK
Trigger: TTTGCGCAGAGAAAAAGTCCACTTGGAAGAGACAAT...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCCCTCTGTCTGGGCCTTaGACTCCCAAATCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFPLSGP*TPKSAC
Trigger: ACAAGCAGATTTGGGAGTCCAAGGCCCAGACAGAGG...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCCCTCTGTCTGGGCCTTaGACTCCCAAATCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIPLSGP*TPKSAC
Trigger: ACAAGCAGATTTGGGAGTCCAAGGCCCAGACAGAGG...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTAGCTGGACCTCTGTCTaGGCCTTGGACTCCCAAATC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVSWTSV*ALDSQI
Trigger: GATTTGGGAGTCCAAGGCCCAGACAGAGGTCCAGCT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGCTTCATGCAGCCTACTaGTCAGTTCTCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKLHAAY*SVLWRP
Trigger: AGGCCTCCAGAGAACTGACCAGTAGGCTGCATGAAG...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTCAGCAATAGCTACTTaGATTGCCTCTTCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSSAIAT*IASSLP
Trigger: TGGCAAGGAAGAGGCAATCCAAGTAGCTATTGCTGA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTCAGCAATAGCTACTTaGATTGCCTCTTCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLSAIAT*IASSLP
Trigger: TGGCAAGGAAGAGGCAATCCAAGTAGCTATTGCTGA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTGGGGATGCCTGTCTTTaGTATTGCACTTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSGDACL*YCTLRG
Trigger: GCCTCTCAAAGTGCAATACCAAAGACAGGCATCCCC...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGCACGAAGACTCTGACTaGTATCGCAGAGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKHEDSD*YRRAEW
Trigger: CCATTCAGCTCTGCGATACCAGTCAGAGTCTTCGTG...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCTCATTAGAAAGTAGATaGCTGCTAGAAGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSSLESR*LLEVAL
Trigger: GAGTGCCACTTCTAGCAGCCATCTACTTTCTAATGA...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGACCATCCTCTTGGCTTaGCTGAAAGACATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RLGETFNGTSGQRQFLLETILLA*LKDIPQ
Trigger: CTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGT...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCCCTGAACTCTGTTTATaGCAGAGCCACCTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFPELCL*QSHLPP
Trigger: AGGGGGAAGGTGGCTCTGCCATAAACAGAGTTCAGG...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGAATGGAATTCTATCCTaGCTGTCCTTCTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWNGILS*LSFSGL
Trigger: TAGACCTGAGAAGGACAGCCAGGATAGAATTCCATT...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTGGGCTTGCAAAGTGCTaGTTAGTTCCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSGLAKC*LVPPSP
Trigger: AGGAGAAGGAGGAACTAATCAGCACTTTGCAAGCCC...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGGGGCTTGCAAAGTGCTaGTTAGTTCCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKGLAKC*LVPPSP
Trigger: AGGAGAAGGAGGAACTAATCAGCACTTTGCAAGCCC...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCCTGCCTGTGTCTGGCTaGGCTGGGCTTGTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQILPVSG*AGLVKC
Trigger: GCACTTTACAAGCCCAGCTCAGCCAGACACAGGCAG...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTAGCAAGTCAACGACCTaGGCACGGCCCACCAAGGAT +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPSKSTT*ARPTKD
Trigger: ATCCTTGGTGGGCCGTGCTCAGGTCGTTGACTTGCT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGATGGTCTGGGCTGACTaGACTGCTTGCTCATTCTTA +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKMVWAD*TACSFL
Trigger: TAAGAATGAGCAAGCAGTTCAGTCAGCCCAGACCAT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACTGAATGGTCTGGGCTaGCTGAACTGCTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPLNGLG*LNCLLI
Trigger: AATGAGCAAGCAGTTCAGTCAGCCCAGACCATTCAG...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGCAATATTCTCCTCAGTaGCTGCCTGTGTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKQYSPQ*LPVCPH
Trigger: ATGAGGGCACACAGGCAGTCACTGAGGAGAATATTG...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTCTAGGAGAGTAATCTaGGAAGACAGTTTTTCATTC +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLSRRVI*EDSFSF
Trigger: GAATGAAAAACTGTCTTCTCAGATTACTCTCCTAGA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATATGGATCTGTTCAGTaGGCAGGTTGTCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRYGSVQ*AGCHGQ
Trigger: CTGCCCATGACAACCTGCTCACTGAACAGATCCATA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATTTGGCTTCTATGCTaGGACTATGGATCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSIWLLC*DYGSVQ
Trigger: CTGAACAGATCCATAGTCTCAGCATAGAAGCCAAAT...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTTTCATACTCCATTTTaGCCCTTTCAAGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLFHTPF*PFQVLP
Trigger: AGGAAGAACTTGAAAGGGTCAAAATGGAGTATGAAA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCTTGGTTACTTCCTCCTaGAGCATTTTTAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSLVTSS*SIFSSP
Trigger: TGGTGAACTAAAAATGCTTCAGGAGGAAGTAACCAA...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTTAAGTTCTGCTAATTaGTTCATAAGCCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWALSSAN*FISLSS
Trigger: GGAAGAGAGGCTTATGAATCAATTAGCAGAACTTAA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTTAAGTTCTGCTAATTaGTTCATAAGCCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLLSSAN*FISLSS
Trigger: GGAAGAGAGGCTTATGAATCAATTAGCAGAACTTAA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGGCACTAATTTTCTCTTaGTACCTGATGCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEALIFS*YLMQSF
Trigger: GAAGGACTGCATCAGGTATCAAGAGAAAATTAGTGC...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTTCACAGACCTTCTGCTaGAGCTGGACCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLSQTFC*SWTSVW
Trigger: CCAGACAGAGGTCCAGCTTCAGCAGAAGGTCTGTGA...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTCACAGACCTTCTGCTaGAGCTGGACCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLSQTFC*SWTSVW
Trigger: CCAGACAGAGGTCCAGCTTCAGCAGAAGGTCTGTGA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTTTCTCCATCCTGAGCTaGTGCAGCTCATGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLFSILS*CSSCCQ
Trigger: CTGGCAGCATGAGCTGCATCAGCTCAGGATGGAGAA...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTCTGCTGATCTTTATCTaGGATAGCCATAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSLLIFI*DSHKVL
Trigger: CAGTACCTTATGGCTATCTCAGATAAAGATCAGCAG...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTGCACTTTGAGAGGCTaGGTCTGGGAGGAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVCTLRG*VWEEED
Trigger: GTCTTCTTCCTCCCAGACTCAGCCTCTCAAAGTGCA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTTTGGTATTGCACTTTaGGAGGCTGAGTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKFGIAL*EAESGR
Trigger: CCTCCCAGACTCAGCCTCTCAAAGTGCAATACCAAA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTTTGGTATTGCACTTTaGGAGGCTGAGTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKFGIAL*EAESGR
Trigger: CCTCCCAGACTCAGCCTCTCAAAGTGCAATACCAAA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTGTGAACTCCATTCTTTTTTCTCTTCCAGTAGCTaGGAGAAGTTGCTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: AAVPLVPQGHSFCELHSFFSSSS*EKLLFS
Trigger: ACTGAACAGCAACTTCTCTCAGCTACTGGAAGAGAA...AAAAGAATGGAGTTCACAGAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR TCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAACAGTGCCTGCTCCTaGGTGCCACAGGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQINSACS*VPQEPM
Trigger: CATTGGCTCCTGTGGCACTCAGGAGCAGGCACTGTT...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCCTCTTGGCTTGGCTaGAAGACATTCCTCAGTATC +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQSSWLG*KTFLSI
Trigger: GATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCAAATCAGATGTCCTATaGGGTGACATGTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSKSDVL*GDMFIS
Trigger: GGAAATGAACATGTCACCTCATAGGACATCTGATTT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCCACCACCAATTGCTCTaGATAAGCCAGGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLHHQLL*ISQALL
Trigger: CAGGAGCGCCTGGCTTATGCAGAGCAATTGGTGGTG...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAGCATCACAGGCAGACTaGAGCTCTTGTCCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRASQAD*SSCPVF
Trigger: AAAGACTGGACAAGAGCTGCAGTCTGCCTGTGATGC...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGAAAGAAGTCTGAGATaGTGTTTCATGTTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAERSLR*CFMLLQ
Trigger: TTGCAACAACATGAAACAGCATCTCAGACTTCTTTC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCATGCCTTACACGTTCTaGCCCCTCAAGCACTTCACT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFMPYTF*PLKHFT
Trigger: AGTGAAGTGCTTGAGGGGGCAGAACGTGTAAGGCAT...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAATGCCTTACACGTTCTaGCCCCTCAAGCACTTCACT +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPMPYTF*PLKHFT
Trigger: AGTGAAGTGCTTGAGGGGGCAGAACGTGTAAGGCAT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCATGCCTTACACGTTCTaGCCCCTCAAGCACTTCACT +
Preference number: 4 (lower is better)
Translates to: ERRASLSLFKSPCSFNCAMPYTF*PLKHFT
Trigger: AGTGAAGTGCTTGAGGGGGCAGAACGTGTAAGGCAT...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCTCTGTTAATAAGAGCTaGCTGGAGCTTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSSVNKS*LELSLS
Trigger: AGAAAGAGAAAGCTCCAGGCAGCTCTTATTAACAGA...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGTCTGTTAATAAGAGCTaGCTGGAGCTTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSVNKS*LELSLS
Trigger: AGAAAGAGAAAGCTCCAGGCAGCTCTTATTAACAGA...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGGAAGAACACGATTCCTaGTGGTCTGTGCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLEEHDS*WSVLGS
Trigger: ACTCCCAAGCACAGACCAGCAGGAATCGTGTTCTTC...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCCTGCTTTCCAATTTCTaGTGCAGGCTTTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVILLSNF*CRLSAW
Trigger: CCATGCCGAAAGCCTGCAGCAGAAATTGGAAAGCAG...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTCATCCAGTTTAGGTTaGAATTCTCTTAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSSSLG*NSLRCS
Trigger: AGAACATCTAAGAGAATTGCAACCTAAACTGGATGA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATTGGCTTTCCACATCTaGCAGAGACTTGGTGAGACG +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPLAFHI*QRLGET
Trigger: CGTCTCACCAAGTCTCTGGCAGATGTGGAAAGCCAA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTCTTGCTCAGCTTCCTaGAACTGCTTTTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKSCSAS*NCFSVS
Trigger: GGAGACAGAAAAGCAGTTGCAGGAAGCTGAGCAAGA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTGCAGGGTGCACCTCTaGCCTAAGCCGGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQICRVHL*PKPVIL
Trigger: GAGAATGACCGGCTTAGGGCAGAGGTGCACCCTGCA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTAAGATCTATTGATAGTCACCCACTATaGGGTCTCGATCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: FHPTPLRVLRQLLLVRSIDSHPL*GLDHFG
Trigger: TCCAAAATGATCGAGACCGCATAGTGGGTGACTATC...AATAGATCTTACAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGGTGGAAGGCTGAGCTaGAGACCTCTGCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPGGRLS*RPLLPF
Trigger: GAAGGGAAGCAGAGGTCTGCAGCTCAGCCTTCCACC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGGCTTCAGAAAAGCTTTaGTGCGGTTCCCTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKASEKL*CGSLSS
Trigger: GGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGC...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTCTAACCGTCTGATCTaGTCCTCGGCCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVSNRLI*SSATER
Trigger: TCTCTCTGTGGCCGAGGAGCAGATCAGACGGTTAGA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGCTGGCTGAGAGTCAATaGCTAATATTGGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKLAESQ*LILAPS
Trigger: ACTGGGAGCCAATATTAGGCATTGACTCTCAGCCAG...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGCTGGCTGAGAGTCAATaGCTAATATTGGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQLAESQ*LILAPS
Trigger: ACTGGGAGCCAATATTAGGCATTGACTCTCAGCCAG...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATCTCGGACCACCTGCTaGATGGAACTCAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRSRTTC*MELNCA
Trigger: TGCACAGTTGAGTTCCATGCAGCAGGTGGTCCGAGA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393667.7
ENST00000482512.5
CDS-3UTR CCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTGTGTCTGGCTGAGCTaGGCTTGTAAAGTGCTAATG +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQCVWLS*ACKVLM
Trigger: CATTAGCACTTTACAAGCCCAGCTCAGCCAGACACA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCGACTCTAGTTCAGCCTaGGCTTGGCCTGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLDSSSA*AWPACS
Trigger: TGAGCAAGCAGGCCAAGCCCAGGCTGAACTAGAGTC...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTACTTTCATTTTAATTaGAGCTATTCCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLYFHFN*SYSLTL
Trigger: GAGGGTGAGGGAATAGCTCCAATTAAAATGAAAGTA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCAACTCCTCAATCAACTaGTTTAGGTTGCTAATTTCC +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWANSSIN*FRLLIS
Trigger: GGAAATTAGCAACCTAAACCAGTTGATTGAGGAGTT...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTTCTGTGAAAGAGCCTaGGACAGTTCTTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSFCERA*DSSSTL
Trigger: TAAAGTGGAAGAACTGTCCCAGGCTCTTTCACAGAA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTTCTGTGAAAGAGCCTaGGACAGTTCTTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEFCERA*DSSSTL
Trigger: TAAAGTGGAAGAACTGTCCCAGGCTCTTTCACAGAA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp TTCCCTCACCCTCCATCTGTTTCATTTCTTTCTGGTCAAGGACCTCATGATCTGGATCCTTCTCCTCGATaGTTTGTTGGAGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: FPHPPSVSFLSGQGPHDLDPSPR*FVGGFP
Trigger: TGGAAACCCTCCAACAAACCATCGAGGAGAAGGATC...CAGATCATGAGGTCCTTGACCAGAAAGAAATGAAACAGATGGAGGGTGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTGTTTGACCAGAGCCTaGAATTGCTCTTCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKCLTRA*NCSSAA
Trigger: GGCAGCTGAAGAGCAATTCCAGGCTCTGGTCAAACA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACTGCTGGTCTGTGCTTaGGAGTTTTCCGTCTATGGA +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPLLVCA*EFSVYG
Trigger: TCCATAGACGGAAAACTCCCAAGCACAGACCAGCAG...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTCTCATCATGCTCTTTaGCTTGCATTTCTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFSHHAL*LAFLAV
Trigger: CACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGA...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAGAACTGTGGTATAGGTaGCGTGTCTCTTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPELWYR*RVSSSW
Trigger: CCAGCTAGAAGAGACACGCCACCTATACCACAGTTC...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCGAACTGTGGTATAGGTaGCGTGTCTCTTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFELWYR*RVSSSW
Trigger: CCAGCTAGAAGAGACACGCCACCTATACCACAGTTC...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGCTTAAATCAGTCAACTaGTCTTTGAGACTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: LSATGANDRSPGRVPFTVLKSVN*SLRLLS
Trigger: ACTTAAGAGTCTCAAAGACCAGTTGACTGATTTAAG...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCAGGTCTTCTCTATATTaGATCAGTTCTGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSRSSLY*ISSASS
Trigger: GCTAGATGCAGAACTGATCCAATATAGAGAAGACCT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAGGGGATGCCTGTCTTTaGTATTGCACTTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRGDACL*YCTLRG
Trigger: GCCTCTCAAAGTGCAATACCAAAGACAGGCATCCCC...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTAAGCTGTCATTGAGCTaGGTCCTGAGAAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSKLSLS*VLRSSV
Trigger: GACAGAACTTCTCAGGACCCAGCTCAATGACAGCTT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTCAGCAGCCACTCTTTaGTCTCGTTCTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKSAATL*SRSSSS
Trigger: GCTGGAAGAAGAACGAGACCAAAGAGTGGCTGCTGA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTGGAAAGTTGCTCCTCTaGCTGAGGTTCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVGKLLL*LRFCRQ
Trigger: CTGCCTACAGAACCTCAGTCAGAGGAGCAACTTTCC...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCGGAAAGTTGCTCCTCTaGCTGAGGTTCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLGKLLL*LRFCRQ
Trigger: CTGCCTACAGAACCTCAGTCAGAGGAGCAACTTTCC...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCAGAAGCTTTGAATTTTaGTCCTTTAGAGCATCACAG +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSRSFEF*SFRASQ
Trigger: CTGTGATGCTCTAAAGGATCAAAATTCAAAGCTTCT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAATGGTCTGGGCTGACTaGACTGCTTGCTCATTCTTA +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPMVWAD*TACSFL
Trigger: TAAGAATGAGCAAGCAGTTCAGTCAGCCCAGACCAT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTCAAGTTCCTTCTGTaGAAGAGCCTGGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRFKFLL*KSLGQF
Trigger: GAACTGTCCCAGGCTCTTTCACAGAAGGAACTTGAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGCTTCTTCCAATCTACTaGCTCTTTGCAGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKLLPIY*LFAEAP
Trigger: AGGAGCTTCTGCAAAGAGTCAGTAGATTGGAAGAAG...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTTCTGATTCATCTGTTTaGCCAGAGCCTGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSSDSSV*PEPGIA
Trigger: AGCAATTCCAGGCTCTGGTCAAACAGATGAATCAGA...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTTGCTTGGTTTTCACTaGTTTCTGCTTGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLLLGFH*FLLGAN
Trigger: ATTTGCTCCAAGCAGAAATCAGTGAAAACCAAGCAA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTATGGATTCCCTTACTTaGATCTGGAGTTGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSMDSLT*IWSCLS
Trigger: GCTAAGGCAACTCCAGATTCAAGTAAGGGAATCCAT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCCTGCCAGAGACTTGGTaGGACGTTCAATGGTACCTC +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLLPETW*DVQWYL
Trigger: GAGGTACCATTGAACGTCTCACCAAGTCTCTGGCAG...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTGAGCTGCTGAGACTCTaGTTTTCCAATAAAGACCTG +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSELLRL*FSNKDL
Trigger: CAGGTCTTTATTGGAAAATCAGAGTCTCAGCAGCTC...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGCCTCTTGCTGCCTTATaGTCCCTTCCAAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKPLAAL*SLPSFL
Trigger: AAGGAAACTTGGAAGGGATCATAAGGCAGCAAGAGG...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGACCTCTTGCTGCCTTATaGTCCCTTCCAAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRPLAAL*SLPSFL
Trigger: AAGGAAACTTGGAAGGGATCATAAGGCAGCAAGAGG...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTCTGAACTTAGAATTTTaGATATCAGCCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSLNLEF*ISASCC
Trigger: GCAGCAAGAGGCTGATATTCAAAATTCTAAGTTCAG...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCTGAACTTAGAATTTTaGATATCAGCCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQELNLEF*ISASCC
Trigger: GCAGCAAGAGGCTGATATTCAAAATTCTAAGTTCAG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCCAGCAGCCTCTTGGATaGGTTGGTCTTTTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFQQPLG*VGLFPR
Trigger: TCTTGGAAAAAGACCAACTCATCCAAGAGGCTGCTG...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTGGCATTCTCAGAATTaGGATCATCCATATGACTTC +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSWHSQN*DHPYDF
Trigger: GAAGTCATATGGATGATCTCAATTCTGAGAATGCCA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTTAAGTTTCTCAAGGTaGGACAAGCTATTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFLSFSR*DKLFSS
Trigger: TGAGGAGAATAGCTTGTCTCACCTTGAGAAACTTAA...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp AGTGACTGCCTGTGTGCCCTCATTATAAACATCTGGGAAAGAAGTCTGAGATGCGATTCTGCAGATGACTaGGCTGCTGATCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: SDCLCALIINIWERSLRCDSADD*AADLYL
Trigger: CAGATAAAGATCAGCAGCTCAGTCATCTGCAGAATC...GCATCTCAGACTTCTTTCCCAGATGTTTATAATGAGGGCACACAGGCAGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTGCACTTTGAGAGGCTaGGTCTGGGAGGAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLCTLRG*VWEEED
Trigger: GTCTTCTTCCTCCCAGACTCAGCCTCTCAAAGTGCA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGGAGAATTCCAAGTTTTaGGGGGAGTGGTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLENSKF*GEWSKE
Trigger: CTCTTTGGACCACTCCCCTCAAAACTTGGAATTCTC...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTCCTCTTGGCTTGGCTaGAAGACATTCCTCAGTATC +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKSSWLG*KTFLSI
Trigger: GATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTCAGAGACAATGGGGCTaGGAAACTGTAATAACTGTC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSQRQWG*ETVITV
Trigger: GACAGTTATTACAGTTTCTCAGCCCCATTGTCTCTG...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCACATCACGTATGCAATaGGAAAATAACCAACTGGTA +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSTSRMQ*ENNQLV
Trigger: TACCAGTTGGTTATTTTCTCATTGCATACGTGATGT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCTGTGCAGGTTGTTCTaGCTGTGCCTGAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVLCRLF*LCLSKL
Trigger: CAGCTTACTCAGGCACAGGCAGAACAACCTGCACAG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTAGAATCTGGTTTCTCTaGTCAGCAGCAGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVRIWFL*SAAVSS
Trigger: GGAGCTGACTGCTGCTGAGCAGAGAAACCAGATTCT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTGGGCTTGGCCTGCTTaGTCAAACTGTTCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQWAWPA*SNCSKR
Trigger: TCTTTTAGAACAGTTTGAGCAAGCAGGCCAAGCCCA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTGTGAACTCCATTCTTTTCTTCTCTTCCATTTCTaGTTTGTGCTTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: AAVPLVPQGHSFCELHSFLLFHF*FVLLLQ
Trigger: TTGGAGCAGAAGCACAAAGCAGAAATGGAAGAGAAG...AAAAGAATGGAGTTCACAGAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGACTGACTTCTCTGTCTaGCTCCCCAGTTCTATTCTG +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKTDFSV*LPSSIL
Trigger: CAGAATAGAACTGGGGAGGCAGACAGAGAAGTCAGT...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCAAATCCTTCCTTATATaGTGTAGTTCCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAKSFLI*CSSTSF
Trigger: GAAAGAAGTGGAACTACAGCATATAAGGAAGGATTT...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGGGAGTCCCCATCACTTaGATCCGTGTTACTTGTGAT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKGVPIT*IRVTCD
Trigger: ATCACAAGTAACACGGATGCAAGTGATGGGGACTCC...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTCCTGCTGGTCTGTaGTTGGGAGTTTTCCGTCTA +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKIPAGL*LGVFRL
Trigger: TAGACGGAAAACTCCCAAGCACAGACCAGCAGGAAT...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTGAAGAACACGATTCCTaGTGGTCTGTGCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVEEHDS*WSVLGS
Trigger: ACTCCCAAGCACAGACCAGCAGGAATCGTGTTCTTC...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGCTTTCCAATTTCTGCTaGAGGCTTTCGGCATGGACT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKLSNFC*RLSAWT
Trigger: AGTCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAG...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCCTTTCCAATTTCTGCTaGAGGCTTTCGGCATGGACT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFLSNFC*RLSAWT
Trigger: AGTCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAG...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTATTTTAGTGAGAGCTaGTTCTTTCTCACTAAGTTG +
Preference number: 4 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLYFSES*FFLTKL
Trigger: CAACTTAGTGAGAAAGAAGCAGCTCTCACTAAAATA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTTTGCGGTGTTCAACTaGTTGAGCCAGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLFAVFN*LSQIFF
Trigger: AAAGAAAATCTGGCTCAAGCAGTTGAACACCGCAAA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCCTGCTTGTGCCTTTTTaGGGTGTTCAACTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFLLVPF*GVQLLE
Trigger: CTCAAGCAGTTGAACACCGCAAAAAGGCACAAGCAG...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCCTGCTTGTGCCTTTTTaGGGTGTTCAACTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: ERRASLSLFKSPCSFNCALLVPF*GVQLLE
Trigger: CTCAAGCAGTTGAACACCGCAAAAAGGCACAAGCAG...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCAGGTGCTTCTCTTCTaGCTGTTCCAGTCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVQVLLF*LFQSSL
Trigger: GAGCGAAGACTGGAACAGGCAGAAGAGAAGCACCTG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCGCTCTTAGTAAAGGCTaGAAGCTGGGTCACAGTACT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFALSKG*KLGHST
Trigger: AGTACTGTGACCCAGCTTGCAGCCTTTACTAAGAGC...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAGGAGAGGTTTTCCTaGCTGAGCTCTTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPQERFS*LSSSCI
Trigger: TATGCAAGAAGAGCTCAGGCAGGAAAACCTCTCCTG...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACTGGCTGAGAGTCAATaGCTAATATTGGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPLAESQ*LILAPS
Trigger: ACTGGGAGCCAATATTAGGCATTGACTCTCAGCCAG...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTGTGTCTGGCTGAGCTaGGCTTGTAAAGTGCTAATG +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKCVWLS*ACKVLM
Trigger: CATTAGCACTTTACAAGCCCAGCTCAGCCAGACACA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTGCTCTGCCTGTGTCTaGCTGAGCTGGGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLCSACV*LSWACK
Trigger: TTTACAAGCCCAGCTCAGCCAGACACAGGCAGAGCA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTTGCTCTGCCTGTGTCTaGCTGAGCTGGGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLCSACV*LSWACK
Trigger: TTTACAAGCCCAGCTCAGCCAGACACAGGCAGAGCA...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGTCAGCCCTTTTTCCCTaGAGCTGTAATTTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSALFP*SCNLRN
Trigger: ATTTCTTAAATTACAGCTCCAGGGAAAAAGGGCTGA...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCTTCTTTTTCAACTGCTaGAAGACTGCTCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSFFFNC*KTALFI
Trigger: AATGAAGAGAGCAGTCTTCCAGCAGTTGAAAAAGAA...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGACACTGACCAATATCTaGTACAGCAGAAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLTLTNI*YSRKGF
Trigger: AAATCCCTTTCTGCTGTACCAGATATTGGTCAGTGT...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTCTATGCTGAGACTATaGATCTGTTCAGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKSMLRL*ICSVSR
Trigger: CCTGCTCACTGAACAGATCCATAGTCTCAGCATAGA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTTCTATGCTGAGACTATaGATCTGTTCAGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSSMLRL*ICSVSR
Trigger: CCTGCTCACTGAACAGATCCATAGTCTCAGCATAGA...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCGATCCTTCTCCTCGATaGTTTGTTGGAGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIDPSPR*FVGGFP
Trigger: TGGAAACCCTCCAACAAACCATCGAGGAGAAGGATC...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTGCAGGCTTTCGGCATaGACTTCAGCTTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVCRLSA*TSASWD
Trigger: ATCCCATGAAGCTGAAGTCCATGCCGAAAGCCTGCA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGCCAGCAATTTGTAGTTaGCTGCTTTCCAATTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLGETFNGTSGQRQFLLEPAICS*LLSNFC
Trigger: GCAGAAATTGGAAAGCAGCCAACTACAAATTGCTGG...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTACTTACAGCAGGGTTaGCACTCTTCGCTGATGGAA +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKYLQQG*HSSLME
Trigger: TTCCATCAGCGAAGAGTGCCAACCCTGCTGTAAGTA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGCGTGTCTCTTCTAGCTaGGACAAAAGTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLRVSSS*DKSSLF
Trigger: AAACAAAGAACTTTTGTCCCAGCTAGAAGAGACACG...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTCGTGTCTCTTCTAGCTaGGACAAAAGTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSRVSSS*DKSSLF
Trigger: AAACAAAGAACTTTTGTCCCAGCTAGAAGAGACACG...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTGAACTGTGGTATAGGTaGCGTGTCTCTTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVELWYR*RVSSSW
Trigger: CCAGCTAGAAGAGACACGCCACCTATACCACAGTTC...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCCTTAAATCAGTCAACTaGTCTTTGAGACTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWALKSVN*SLRLLS
Trigger: ACTTAAGAGTCTCAAAGACCAGTTGACTGATTTAAG...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTACTGGTCAGTTCTCTaGAGGCCTGAAGATCAGTCT +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKYWSVL*RPEDQS
Trigger: AGACTGATCTTCAGGCCTCCAGAGAACTGACCAGTA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGTACTGGTCAGTTCTCTaGAGGCCTGAAGATCAGTCT +
Preference number: 4 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLYWSVL*RPEDQS
Trigger: AGACTGATCTTCAGGCCTCCAGAGAACTGACCAGTA...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTACTGGTCAGTTCTCTaGAGGCCTGAAGATCAGTCT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKYWSVL*RPEDQS
Trigger: AGACTGATCTTCAGGCCTCCAGAGAACTGACCAGTA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTAGCTATTCTCCTCAGTaGAGTTCATTGAAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSSYSPQ*SSLKRR
Trigger: CCGCCTTTTCAATGAACTCCACTGAGGAGAATAGCT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTACTCTGTACTTCAGCTaGGCTGGTGGAAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPTLYFS*AGGRLS
Trigger: GCTCAGCCTTCCACCAGCCCAGCTGAAGTACAGAGT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGAAGCTGTCATTGAGCTaGGTCCTGAGAAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLKLSLS*VLRSSV
Trigger: GACAGAACTTCTCAGGACCCAGCTCAATGACAGCTT...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTCACGAAGACTCTGACTaGTATCGCAGAGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVHEDSD*YRRAEW
Trigger: CCATTCAGCTCTGCGATACCAGTCAGAGTCTTCGTG...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACATTCACTTCCTGTCTaGTGTTGCATAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPHSLPV*CCIAAA
Trigger: AGCAGCAGCTATGCAACACCAGACAGGAAGTGAATG...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGGAGAAGACCTGTAAATaGGAAGACTGTTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQEKTCK*EDCSTG
Trigger: TCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTC...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCCTGAACTCTGTTTATaGCAGAGCCACCTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLPELCL*QSHLPP
Trigger: AGGGGGAAGGTGGCTCTGCCATAAACAGAGTTCAGG...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCCTGAACTCTGTTTATaGCAGAGCCACCTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVPELCL*QSHLPP
Trigger: AGGGGGAAGGTGGCTCTGCCATAAACAGAGTTCAGG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGGGGAATAGGCACAAATaGAATTCTATCCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQGNRHK*NSILAV
Trigger: GACAGCCAGGATAGAATTCCATTTGTGCCTATTCCC...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR CAA 72 bp TCCACCTGTAGCTGCTTTATCCTCTCATCATGCTCTTaGGCTTGCATTTCTAGCTGTGTATGCAGAGCCTTA +
Preference number: 4 (lower is better)
Translates to: STCSCFILSSCS*ACISSCVCRAL
Trigger: TAAGGCTCTGCATACACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGAGGATAAAGCAGCTACAGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp TCATCATGTGAGCTGAAATCCTTACTTACAGCAGGGTaGGCACTCTTCGCTGATGGAACCGATTCTGAACAT +
Preference number: 4 (lower is better)
Translates to: SSCELKSLLTAG*ALFADGTDSEH
Trigger: ATGTTCAGAATCGGTTCCATCAGCGAAGAGTGCCAACCCTGCTGTAAGTAAGGATTTCAGCTCACATGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGGAAAGTTGCTCCTCTaGCTGAGGTTCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPGKLLL*LRFCRQ
Trigger: CTGCCTACAGAACCTCAGTCAGAGGAGCAACTTTCC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCGGGCTTGCAAAGTGCTaGTTAGTTCCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLGLAKC*LVPPSP
Trigger: AGGAGAAGGAGGAACTAATCAGCACTTTGCAAGCCC...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAATCTGCTGTAACTGCTaGGAGAGAATCTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRICCNC*ERIWFL
Trigger: GAGAAACCAGATTCTCTCTCAGCAGTTACAGCAGAT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCATCTGCTGTAACTGCTaGGAGAGAATCTGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIICCNC*ERIWFL
Trigger: GAGAAACCAGATTCTCTCTCAGCAGTTACAGCAGAT...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTAGAAGCTTTGAATTTTaGTCCTTTAGAGCATCACAG +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSRSFEF*SFRASQ
Trigger: CTGTGATGCTCTAAAGGATCAAAATTCAAAGCTTCT...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCTGAATGGTCTGGGCTaGCTGAACTGCTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVLNGLG*LNCLLI
Trigger: AATGAGCAAGCAGTTCAGTCAGCCCAGACCATTCAG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTCTAGGAGAGTAATCTaGGAAGACAGTTTTTCATTC +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSSRRVI*EDSFSF
Trigger: GAATGAAAAACTGTCTTCTCAGATTACTCTCCTAGA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATCAGATGTTCTACTTTaGTGTTCAGTGCTCGCCTGT +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRSDVLL*CSVLAC
Trigger: ACAGGCGAGCACTGAACATCAAAGTAGAACATCTGA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTACCATCCTGCTTTGTTaGTTTCAATTCTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSTILLC*FQFYSS
Trigger: GCTGGAGTAGAATTGAAATCAACAAAGCAGGATGGT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCCTTCAGACAAAGCAGTaGATGCACTGCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVILQTKQ*MHCCCC
Trigger: ACAACAACAGCAGTGCATTCACTGCTTTGTCTGAAG...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATCCAGTTGCTTTACCTaGGCCCTCAATTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRSSCFT*ALNSVT
Trigger: GGTAACAGAATTGAGGGCTCAGGTAAAGCAACTGGA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTATGGATCTGTTCAGTaGGCAGGTTGTCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLYGSVQ*AGCHGQ
Trigger: CTGCCCATGACAACCTGCTCACTGAACAGATCCATA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATTCAAGTTCCTTCTGTaGAAGAGCCTGGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRFKFLL*KSLGQF
Trigger: GAACTGTCCCAGGCTCTTTCACAGAAGGAACTTGAA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTCTGATTCATCTGTTTaGCCAGAGCCTGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFSDSSV*PEPGIA
Trigger: AGCAATTCCAGGCTCTGGTCAAACAGATGAATCAGA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCTGCCAGAGACTTGGTaGGACGTTCAATGGTACCTC +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPLPETW*DVQWYL
Trigger: GAGGTACCATTGAACGTCTCACCAAGTCTCTGGCAG...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGGAGCTGCTGAGACTCTaGTTTTCCAATAAAGACCTG +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKELLRL*FSNKDL
Trigger: CAGGTCTTTATTGGAAAATCAGAGTCTCAGCAGCTC...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGGCTTCCACCACATGCTaGATCCTTTCTGCTTCATTA +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKASTTC*ILSASL
Trigger: TAATGAAGCAGAAAGGATTCAGCATGTGGTGGAAGC...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTGTGTTCCCTCTTCAGTaGCATTCGTTTGGTTATCAT +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSVFPLQ*HSFGYH
Trigger: ATGATAACCAAACGAATGTCACTGAAGAGGGAACAC...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCCTCACCCTCCATCTGTTTCATTTCTTTCTGGTCAAGGACCTCATGATCTGGTGTTCCCTCTTCAGTaGCATTCGTTTGGTTATCAT +
Preference number: 4 (lower is better)
Translates to: FPHPPSVSFLSGQGPHDLVFPLQ*HSFGYH
Trigger: ATGATAACCAAACGAATGTCACTGAAGAGGGAACAC...CAGATCATGAGGTCCTTGACCAGAAAGAAATGAAACAGATGGAGGGTGAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGGTGTTCCCTCTTCAGTaGCATTCGTTTGGTTATCAT +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKVFPLQ*HSFGYH
Trigger: ATGATAACCAAACGAATGTCACTGAAGAGGGAACAC...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTCGGTGTTCAACTGCTTaGGCCAGATTTTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSRCSTA*ARFSLV
Trigger: AACCAAAGAAAATCTGGCTCAAGCAGTTGAACACCG...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTCCTCTTGCTGCCTTATaGTCCCTTCCAAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVPLAAL*SLPSFL
Trigger: AAGGAAACTTGGAAGGGATCATAAGGCAGCAAGAGG...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCAGTTCTCTGGAGGCCTaGAGATCAGTCTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLSSLEA*RSVSSC
Trigger: ACAACTGGAGACTGATCTTCAGGCCTCCAGAGAACT...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGGATTCTGCAGATGACTaGGCTGCTGATCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKDSADD*AADLYL
Trigger: CAGATAAAGATCAGCAGCTCAGTCATCTGCAGAATC...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTGCACTTTGAGAGGCTaGGTCTGGGAGGAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQICTLRG*VWEEED
Trigger: GTCTTCTTCCTCCCAGACTCAGCCTCTCAAAGTGCA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCTTCTCTTCCAGTAGCTaGGAGAAGTTGCTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: ERRASLSLFKSPCSFNCAFSSSS*EKLLFS
Trigger: ACTGAACAGCAACTTCTCTCAGCTACTGGAAGAGAA...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTCTGGTATCGCAGAGCTaGATGGAAAGGGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVLVSQS*MERVFF
Trigger: GAAAAACACCCTTTCCATTCAGCTCTGCGATACCAG...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTGCAGGCACTTTCCGTaGAGAGTTGGAGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQICRHFP*RVGEKT
Trigger: GGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAAGTCAGACTCCTGGCTaGGAGTCAATGCCTAATATT +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRSQTPG*ESMPNI
Trigger: AATATTAGGCATTGACTCTCAGCCAGGAGTCTGACT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTTCTCCTGGAGCTGTTaGTTCATCATTACAAATTCT +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLFSWSC*FIITNS
Trigger: AGAATTTGTAATGATGAAGCAACAGCTCCAGGAGAA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATCCTCAAGCTTCCTTTaGAGCACCCTCAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRSSSFL*STLNFC
Trigger: ACAGAAATTGAGGGTGCTGCAAAGGAAGCTTGAGGA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTCCTCAAGCTTCCTTTaGAGCACCCTCAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKSSSFL*STLNFC
Trigger: ACAGAAATTGAGGGTGCTGCAAAGGAAGCTTGAGGA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCAGAATCTGGTTTCTCTaGTCAGCAGCAGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLRIWFL*SAAVSS
Trigger: GGAGCTGACTGCTGCTGAGCAGAGAAACCAGATTCT...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTCTGCTTTGTGCTTCTaGTCCAAAGCACTATACCGA +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFSALCF*SKALYR
Trigger: TCGGTATAGTGCTTTGGAGCAGAAGCACAAAGCAGA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTCTGCTTTGTGCTTCTaGTCCAAAGCACTATACCGA +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVISALCF*SKALYR
Trigger: TCGGTATAGTGCTTTGGAGCAGAAGCACAAAGCAGA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGCTTCTCTTCCATTTCTaGTTTGTGCTTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQLLFHF*FVLLLQ
Trigger: TTGGAGCAGAAGCACAAAGCAGAAATGGAAGAGAAG...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAATTCTCCTCAGTGACTaGCTGTGTGCCCTCATTATA +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRILLSD*LCALII
Trigger: TATAATGAGGGCACACAGGCAGTCACTGAGGAGAAT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTCAACTGCTGGAAGACTaGTCTCTTCATTTGGCATTA +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSQLLED*SLHLAL
Trigger: TAATGCCAAATGAAGAGAGCAGTCTTCCAGCAGTTG...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGCTGTTCTTTTTCAACTaGTGGAAGACTGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQLFFFN*WKTALF
Trigger: GAAGAGAGCAGTCTTCCAGCAGTTGAAAAAGAACAG...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTCTGTTCTTTTTCAACTaGTGGAAGACTGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSLFFFN*WKTALF
Trigger: GAAGAGAGCAGTCTTCCAGCAGTTGAAAAAGAACAG...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAGACAAAGCAGTGAATaGACTGCTGTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKRQSSE*TAVVVS
Trigger: GCTGACAACAACAGCAGTGCATTCACTGCTTTGTCT...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTTTTGCAGCTGGCTTTaGAGGCTTCTTATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFFCSWL*RLLIRV
Trigger: TACCCTGATAAGAAGCCTGCAAAGCCAGCTGCAAAA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTTTTGCAGCTGGCTTTaGAGGCTTCTTATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIFCSWL*RLLIRV
Trigger: TACCCTGATAAGAAGCCTGCAAAGCCAGCTGCAAAA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATTTTGCAGCTGGCTTTaGAGGCTTCTTATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPFCSWL*RLLIRV
Trigger: TACCCTGATAAGAAGCCTGCAAAGCCAGCTGCAAAA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTTCACTTTCCTTATTTTaGAGCTGGCTTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSSLSLF*SWLCRL
Trigger: AAGCCTGCAAAGCCAGCTGCAAAATAAGGAAAGTGA...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAACTTTACTTGAGATATaGCTTACACGTTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPTLLEI*LTRSAP
Trigger: GGGGGCAGAACGTGTAAGGCATATCTCAAGTAAAGT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTGTTTCCTTTACAAGTaGTACGGAGTCCCCATCACT +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVICFLYK*YGVPIT
Trigger: AGTGATGGGGACTCCGTAGCACTTGTAAAGGAAACA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGCAATTTGTAGTTGGCTaGTTTCCAATTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RLGETFNGTSGQRQFLLEQFVVG*FPISAA
Trigger: TGCAGCAGAAATTGGAAAGCAGCCAACTACAAATTG...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTCAGCTTCCTGCAACTaGTTTTCTGTCTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKSASCN*FSVSFL
Trigger: CAAGAAGGAGACAGAAAAGCAGTTGCAGGAAGCTGA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTCAGCTTCCTGCAACTaGTTTTCTGTCTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVISASCN*FSVSFL
Trigger: CAAGAAGGAGACAGAAAAGCAGTTGCAGGAAGCTGA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGAGCTCTAGGATTTTCTaGTGTTTAGATTTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSSRIF*CLDLAN
Trigger: GTTTGCTAAATCTAAACAGCAGAAAATCCTAGAGCT...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAATACTCAGAGAGTCTTaGTCTTCAGTCTCACCTGGT +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPILRES*SSVSPG
Trigger: ACCAGGTGAGACTGAAGAGCAAGACTCTCTGAGTAT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGATACTCAGAGAGTCTTaGTCTTCAGTCTCACCTGGT +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKILRES*SSVSPG
Trigger: ACCAGGTGAGACTGAAGAGCAAGACTCTCTGAGTAT...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCAGTCCTTCTGTAGCTaGTTTACTTCTTGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEQSFCS*FTSCCF
Trigger: AAAACAACAAGAAGTAAAGCAGCTACAGAAGGACTG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTGGACTCCCAAATCTaGTTGTCATGTTCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRLDSQI*LSCSSL
Trigger: CAGGCTTGAACATGACAAGCAGATTTGGGAGTCCAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTTGGACTCCCAAATCTaGTTGTCATGTTCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVILDSQI*LSCSSL
Trigger: CAGGCTTGAACATGACAAGCAGATTTGGGAGTCCAA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGATATTTATTTCTTCATaGAGCCTACTGGTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWIFISS*SLLVSS
Trigger: AGAACTGACCAGTAGGCTGCATGAAGAAATAAATAT...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGAAGCTTATTATTCTCTaGAGCAGCCTCTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKKLIIL*SSLLDE
Trigger: CTCATCCAAGAGGCTGCTGCAGAGAATAATAAGCTT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTCAGAAAAGCTTTGCTaGGGTTCCCTTAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKSEKLC*GSLSSS
Trigger: TGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAATAGACACTTCTCCCTaGCCTTTGGTGAAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPIDTSP*PLVKGK
Trigger: CTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTAT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTCTCTCGGACCACCTaGTGCATGGAACTCAACTGT +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVFSRTT*CMELNC
Trigger: ACAGTTGAGTTCCATGCAGCAGGTGGTCCGAGAGAA...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393667.7
ENST00000482512.5
CDS-3UTR CCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATGTGTCTGGCTGAGCTaGGCTTGTAAAGTGCTAATG +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRCVWLS*ACKVLM
Trigger: CATTAGCACTTTACAAGCCCAGCTCAGCCAGACACA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTGCTCTGCCTGTGTCTaGCTGAGCTGGGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPCSACV*LSWACK
Trigger: TTTACAAGCCCAGCTCAGCCAGACACAGGCAGAGCA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTGCTCTGCCTGTGTCTaGCTGAGCTGGGCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQICSACV*LSWACK
Trigger: TTTACAAGCCCAGCTCAGCCAGACACAGGCAGAGCA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTCAGCCCTTTTTCCCTaGAGCTGTAATTTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQESALFP*SCNLRN
Trigger: ATTTCTTAAATTACAGCTCCAGGGAAAAAGGGCTGA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTTCTTTTTCAACTGCTaGAAGACTGCTCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFFFFNC*KTALFI
Trigger: AATGAAGAGAGCAGTCTTCCAGCAGTTGAAAAAGAA...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGTTCTGGATAATTGCTTaGTTTTCACTGATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWFWIIA*FSLISA
Trigger: AGCAGAAATCAGTGAAAACCAAGCAATTATCCAGAA...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTGCTGGTCTGTGCTTaGGAGTTTTCCGTCTATGGA +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLLLVCA*EFSVYG
Trigger: TCCATAGACGGAAAACTCCCAAGCACAGACCAGCAG...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAGAACACGATTCCTGCTaGTCTGTGCTTGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKREHDSC*SVLGSF
Trigger: AAAACTCCCAAGCACAGACCAGCAGGAATCGTGTTC...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACTTCTAAACCTGGAGTaGAAGAACACGATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPLLNLE*KNTIPA
Trigger: AGCAGGAATCGTGTTCTTCCACTCCAGGTTTAGAAG...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCCTTCTAAACCTGGAGTaGAAGAACACGATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVILLNLE*KNTIPA
Trigger: AGCAGGAATCGTGTTCTTCCACTCCAGGTTTAGAAG...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCAGTCTGGGCACAAGTTaGACTCTAAAACAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVISLGTS*TLKQVE
Trigger: CTCAACCTGTTTTAGAGTCCAACTTGTGCCCAGACT...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTGCAGGCTTTCGGCATaGACTTCAGCTTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVCRLSA*TSASWD
Trigger: ATCCCATGAAGCTGAAGTCCATGCCGAAAGCCTGCA...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTCCTTCATGCTGGCATTaGAAGAAAGAAGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSPSCWH*KKEVFP
Trigger: TGGAAACACTTCTTTCTTCCAATGCCAGCATGAAGG...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTGAACTGTGGTATAGGTaGCGTGTCTCTTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVELWYR*RVSSSW
Trigger: CCAGCTAGAAGAGACACGCCACCTATACCACAGTTC...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCCTTAAATCAGTCAACTaGTCTTTGAGACTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSLKSVN*SLRLLS
Trigger: ACTTAAGAGTCTCAAAGACCAGTTGACTGATTTAAG...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATCAGCAATAGCTACTTaGATTGCCTCTTCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPSAIAT*IASSLP
Trigger: TGGCAAGGAAGAGGCAATCCAAGTAGCTATTGCTGA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCCTCTTGGATGAGTTaGTCTTTTTCCAAGATTATA +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLASWMS*SFSKII
Trigger: TATAATCTTGGAAAAAGACCAACTCATCCAAGAGGC...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCACGAAGACTCTGACTaGTATCGCAGAGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLHEDSD*YRRAEW
Trigger: CCATTCAGCTCTGCGATACCAGTCAGAGTCTTCGTG...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCGAGAAGACCTGTAAATaGGAAGACTGTTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIEKTCK*EDCSTG
Trigger: TCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTC...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTAATGGAATTCTATCCTaGCTGTCCTTCTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSNGILS*LSFSGL
Trigger: TAGACCTGAGAAGGACAGCCAGGATAGAATTCCATT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR CAA 72 bp AGCATCACAGGCAGACTGCAGCTCTTGTCCAGTCTTTaGAAGACTCAAAATATGAGAGGTCTTCTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SITGRLQLLSSL*KTQNMRGLLFH
Trigger: ATGGAAGAGAAGACCTCTCATATTTTGAGTCTTCAAAAGACTGGACAAGAGCTGCAGTCTGCCTGTGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp TCTTGTCCACTTTCCTCAGCAGAAGAGCTCCTCTTGTaGGCAATATCAACAATGCTGATCTCACTGACTTCT +
Preference number: 4 (lower is better)
Translates to: SCPLSSAEELLL*AISTMLISLTS
Trigger: AGAAGTCAGTGAGATCAGCATTGTTGATATTGCCAACAAGAGGAGCTCTTCTGCTGAGGAAAGTGGACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp ACATCTTGTCCACTTTCCTCAGCAGAAGAGCTCCTCTaGTTGGCAATATCAACAATGCTGATCTCACTGACT +
Preference number: 4 (lower is better)
Translates to: TSCPLSSAEELL*LAISTMLISLT
Trigger: AGTCAGTGAGATCAGCATTGTTGATATTGCCAACAAGAGGAGCTCTTCTGCTGAGGAAAGTGGACAAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp TGGACCTCTGTCTGGGCCTTGGACTCCCAAATCTGCTaGTCATGTTCAAGCCTGGAAATGTTAATCTTTAAT +
Preference number: 4 (lower is better)
Translates to: WTSVWALDSQIC*SCSSLEMLIFN
Trigger: ATTAAAGATTAACATTTCCAGGCTTGAACATGACAAGCAGATTTGGGAGTCCAAGGCCCAGACAGAGGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp CGCAGTTCAGCAATAGCTACTTGGATTGCCTCTTCCTaGCCAGAAAGCAGGCTTATAATCTTTTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RSSAIATWIASS*PESRLIIFCSF
Trigger: GAAAGAGCAAAAGATTATAAGCCTGCTTTCTGGCAAGGAAGAGGCAATCCAAGTAGCTATTGCTGAACTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp TTCCAAGATTATAGAGAGATGTCGCTCTTCCAGCTGTaGATAGTCACCCACTATGCGGTCTCGATCATTTTG +
Preference number: 4 (lower is better)
Translates to: FQDYREMSLFQL*IVTHYAVSIIL
Trigger: CAAAATGATCGAGACCGCATAGTGGGTGACTATCAACAGCTGGAAGAGCGACATCTCTCTATAATCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGGGCTTGCAAAGTGCTaGTTAGTTCCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPGLAKC*LVPPSP
Trigger: AGGAGAAGGAGGAACTAATCAGCACTTTGCAAGCCC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGAGAAGCTCATCTTCATaGAGACGAACTTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQRSSSS*RRTCVS
Trigger: TGAAACACAAGTTCGTCTTCATGAAGATGAGCTTCT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340645.9
ENST00000393667.7
CDS-3UTR TCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGAGAAGCTCATCTTCATaGAGACGAACTTGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKRSSSS*RRTCVS
Trigger: TGAAACACAAGTTCGTCTTCATGAAGATGAGCTTCT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
CDS-3UTR TCA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCATGGTCTGGGCTGACTaGACTGCTTGCTCATTCTTA +
Preference number: 4 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLMVWAD*TACSFL
Trigger: TAAGAATGAGCAAGCAGTTCAGTCAGCCCAGACCAT...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTATGGTCTGGGCTGACTaGACTGCTTGCTCATTCTTA +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLMVWAD*TACSFL
Trigger: TAAGAATGAGCAAGCAGTTCAGTCAGCCCAGACCAT...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAATATTCTCCTCAGTaGCTGCCTGTGTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPQYSPQ*LPVCPH
Trigger: ATGAGGGCACACAGGCAGTCACTGAGGAGAATATTG...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTAAGATCTATTAATGCAATTTCCTCTTaGGCTTCTTTCATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: FHPTPLRVLRQLLLVRSINAISS*ASFISN
Trigger: GTTGGAAATGAAAGAAGCTCAAGAGGAAATTGCATT...AATAGATCTTACAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAACCATCCTGCTTTGTTaGTTTCAATTCTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRTILLC*FQFYSS
Trigger: GCTGGAGTAGAATTGAAATCAACAAAGCAGGATGGT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGATTTCTTGTGCTTTATaGAAGTTTAGCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQISCAL*KFSSSS
Trigger: GGAGCTCGAGCTAAACTTTCATAAAGCACAAGAAAT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTCCAGTTGCTTTACCTaGGCCCTCAATTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLSSCFT*ALNSVT
Trigger: GGTAACAGAATTGAGGGCTCAGGTAAAGCAACTGGA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAATTTGGCTTCTATGCTaGGACTATGGATCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRIWLLC*DYGSVQ
Trigger: CTGAACAGATCCATAGTCTCAGCATAGAAGCCAAAT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTTCTTCCACTTTACTTaGGATATGCCTTACACGTTC +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQFFHFT*DMPYTF
Trigger: GAACGTGTAAGGCATATCTCAAGTAAAGTGGAAGAA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTTTCAAGTTCCTTCTGTaGAAGAGCCTGGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLFKFLL*KSLGQF
Trigger: GAACTGTCCCAGGCTCTTTCACAGAAGGAACTTGAA...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATCTGATTCATCTGTTTaGCCAGAGCCTGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRSDSSV*PEPGIA
Trigger: AGCAATTCCAGGCTCTGGTCAAACAGATGAATCAGA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTTGCTTGGTTTTCACTaGTTTCTGCTTGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQLLGFH*FLLGAN
Trigger: ATTTGCTCCAAGCAGAAATCAGTGAAAACCAAGCAA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AGTGACTGCCTGTGTGCCCTCATTATAAACATCTGGGAAAGAAGTCTGAGATGCTTGCTTGGTTTTCACTaGTTTCTGCTTGGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: SDCLCALIINIWERSLRCLLGFH*FLLGAN
Trigger: ATTTGCTCCAAGCAGAAATCAGTGAAAACCAAGCAA...GCATCTCAGACTTCTTTCCCAGATGTTTATAATGAGGGCACACAGGCAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAATGGATTCCCTTACTTaGATCTGGAGTTGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRMDSLT*IWSCLS
Trigger: GCTAAGGCAACTCCAGATTCAAGTAAGGGAATCCAT...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTATGGATTCCCTTACTTaGATCTGGAGTTGCCTTAGC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVMDSLT*IWSCLS
Trigger: GCTAAGGCAACTCCAGATTCAAGTAAGGGAATCCAT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAGAGCTGCTGAGACTCTaGTTTTCCAATAAAGACCTG +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRELLRL*FSNKDL
Trigger: CAGGTCTTTATTGGAAAATCAGAGTCTCAGCAGCTC...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTCAGCAATTCTTTCTTTaGGCTGATCAATCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSQQFFL*ADQSAV
Trigger: TACAGCAGATTGATCAGCTCAAAGAAAGAATTGCTG...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCTTGCTGCTTCACTTTaGGTGTCATCTAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVLAASL*VSSSRT
Trigger: AGTCCTGCTAGATGACACTCAAAGTGAAGCAGCAAG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTCTGAACTTAGAATTTTaGATATCAGCCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSLNLEF*ISASCC
Trigger: GCAGCAAGAGGCTGATATTCAAAATTCTAAGTTCAG...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGTCTTTATCATGTTGCTaGCGCAGTTCAGCAATAGCT +
Preference number: 4 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLSLSCC*RSSAIA
Trigger: AGCTATTGCTGAACTGCGTCAGCAACATGATAAAGA...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTCTTTATCATGTTGCTaGCGCAGTTCAGCAATAGCT +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVISLSCC*RSSAIA
Trigger: AGCTATTGCTGAACTGCGTCAGCAACATGATAAAGA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTTAAGTTTCTCAAGGTaGGACAAGCTATTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKLSFSR*DKLFSS
Trigger: TGAGGAGAATAGCTTGTCTCACCTTGAGAAACTTAA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTAGCTCATTCCACAGGTaGTCTCTCTCATTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLSSFHR*SLSFCR
Trigger: TCTGCAGAATGAGAGAGATCACCTGTGGAATGAGCT...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGCTGCTGATCTTTATCTaGGATAGCCATAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLLLIFI*DSHKVL
Trigger: CAGTACCTTATGGCTATCTCAGATAAAGATCAGCAG...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCTGGTATCGCAGAGCTaGATGGAAAGGGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVLVSQS*MERVFF
Trigger: GAAAAACACCCTTTCCATTCAGCTCTGCGATACCAG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCGAGAATTCCAAGTTTTaGGGGGAGTGGTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLENSKF*GEWSKE
Trigger: CTCTTTGGACCACTCCCCTCAAAACTTGGAATTCTC...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCCTGTTCCACTGGAATTaGTGTTCTGATGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFLFHWN*CSDVRG
Trigger: ACCTCTAACATCAGAACATCAATTCCAGTGGAACAG...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCAGATGTCCTATGAGGTaGCATGTTCATTTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIRCPMR*HVHFPE
Trigger: TTCAGGGAAATGAACATGTCACCTCATAGGACATCT...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAGATGTCCTATGAGGTaGCATGTTCATTTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKRCPMR*HVHFPE
Trigger: TTCAGGGAAATGAACATGTCACCTCATAGGACATCT...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTAAATCAGATGTCCTATaGGGTGACATGTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSKSDVL*GDMFIS
Trigger: GGAAATGAACATGTCACCTCATAGGACATCTGATTT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCCCCTCCAATTATATCTaGAATTGGCAGGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFPSNYI*NWQGRR
Trigger: TCTTCTTCCCTGCCAATTTCAGATATAATTGGAGGG...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGACCTTAGTATACATGTaGTCAAGGGCAAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQTLVYM*SRAKAK
Trigger: CTTTGCTTTTGCCCTTGATCACATGTATACTAAGGT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTCAGAGACAATGGGGCTaGGAAACTGTAATAACTGTC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVQRQWG*ETVITV
Trigger: GACAGTTATTACAGTTTCTCAGCCCCATTGTCTCTG...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTAGAATCTGGTTTCTCTaGTCAGCAGCAGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPRIWFL*SAAVSS
Trigger: GGAGCTGACTGCTGCTGAGCAGAGAAACCAGATTCT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTTCCTCAAAGTATTATaGTCAGCTTCCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQFLKVL*SASICC
Trigger: ACAGCAGATGGAAGCTGAGCATAATACTTTGAGGAA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTTCCTCAAAGTATTATaGTCAGCTTCCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKFLKVL*SASICC
Trigger: ACAGCAGATGGAAGCTGAGCATAATACTTTGAGGAA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTGGGCTTGGCCTGCTTaGTCAAACTGTTCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVWAWPA*SNCSKR
Trigger: TCTTTTAGAACAGTTTGAGCAAGCAGGCCAAGCCCA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAATTCTCCTCAGTGACTaGCTGTGTGCCCTCATTATA +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRILLSD*LCALII
Trigger: TATAATGAGGGCACACAGGCAGTCACTGAGGAGAAT...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTACTGACTTCTCTGTCTaGCTCCCCAGTTCTATTCTG +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLTDFSV*LPSSIL
Trigger: CAGAATAGAACTGGGGAGGCAGACAGAGAAGTCAGT...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTCAACTGCTGGAAGACTaGTCTCTTCATTTGGCATTA +
Preference number: 4 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSQLLED*SLHLAL
Trigger: TAATGCCAAATGAAGAGAGCAGTCTTCCAGCAGTTG...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGACTGTTCTTTTTCAACTaGTGGAAGACTGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRLFFFN*WKTALF
Trigger: GAAGAGAGCAGTCTTCCAGCAGTTGAAAAAGAACAG...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTAGACAAAGCAGTGAATaGACTGCTGTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVRQSSE*TAVVVS
Trigger: GCTGACAACAACAGCAGTGCATTCACTGCTTTGTCT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCTTCTTTGCCTTTCTaGTTCTGCAAGGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQSSLPF*FCKVHF
Trigger: GAAATGAACCTTGCAGAAGCAGAAAGGCAAAGAAGA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATTTTGCAGCTGGCTTTaGAGGCTTCTTATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRFCSWL*RLLIRV
Trigger: TACCCTGATAAGAAGCCTGCAAAGCCAGCTGCAAAA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTCACTTTCCTTATTTTaGAGCTGGCTTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKSLSLF*SWLCRL
Trigger: AAGCCTGCAAAGCCAGCTGCAAAATAAGGAAAGTGA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCTGTTAATAAGAGCTaGCTGGAGCTTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQSVNKS*LELSLS
Trigger: AGAAAGAGAAAGCTCCAGGCAGCTCTTATTAACAGA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGAAATCCTTCCTTATATaGTGTAGTTCCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEKSFLI*CSSTSF
Trigger: GAAAGAAGTGGAACTACAGCATATAAGGAAGGATTT...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCACCAGAGCCTGGAATTaGTCTTCAGCTGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQITRAWN*SSAASF
Trigger: AAAGCTGGCAGCTGAAGAGCAATTCCAGGCTCTGGT...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATGTTTCCTTTACAAGTaGTACGGAGTCCCCATCACT +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRCFLYK*YGVPIT
Trigger: AGTGATGGGGACTCCGTAGCACTTGTAAAGGAAACA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTGTTTCCTTTACAAGTaGTACGGAGTCCCCATCACT +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVCFLYK*YGVPIT
Trigger: AGTGATGGGGACTCCGTAGCACTTGTAAAGGAAACA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCTGCTTTCCAATTTCTaGTGCAGGCTTTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPLLSNF*CRLSAW
Trigger: CCATGCCGAAAGCCTGCAGCAGAAATTGGAAAGCAG...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGCAATTTGTAGTTGGCTaGTTTCCAATTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKQFVVG*FPISAA
Trigger: TGCAGCAGAAATTGGAAAGCAGCCAACTACAAATTG...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATCATGCTCTTTGGCTTaGATTTCTAGCTGTGTATGC +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPSCSLA*ISSCVC
Trigger: GCATACACAGCTAGAAATGCAAGCCAAAGAGCATGA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTCATGCTCTTTGGCTTaGATTTCTAGCTGTGTATGC +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFSCSLA*ISSCVC
Trigger: GCATACACAGCTAGAAATGCAAGCCAAAGAGCATGA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGATCTCTTCTGGTTTTTaGTTCATTTCACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEISSGF*FISQSS
Trigger: GGAACTTTGTGAAATGAAGCAAAAACCAGAAGAGAT...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTTCTTGCTCAGCTTCCTaGAACTGCTTTTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLSCSAS*NCFSVS
Trigger: GGAGACAGAAAAGCAGTTGCAGGAAGCTGAGCAAGA...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCAGCTCTAGGATTTTCTaGTGTTTAGATTTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFSSRIF*CLDLAN
Trigger: GTTTGCTAAATCTAAACAGCAGAAAATCCTAGAGCT...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp TTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTAAGATCTATTCAGTCCTTCTGTAGCTaGTTTACTTCTTGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: FHPTPLRVLRQLLLVRSIQSFCS*FTSCCF
Trigger: AAAACAACAAGAAGTAAAGCAGCTACAGAAGGACTG...AATAGATCTTACAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTTGGACTCCCAAATCTaGTTGTCATGTTCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVLDSQI*LSCSSL
Trigger: CAGGCTTGAACATGACAAGCAGATTTGGGAGTCCAA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATTGGACTCCCAAATCTaGTTGTCATGTTCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRLDSQI*LSCSSL
Trigger: CAGGCTTGAACATGACAAGCAGATTTGGGAGTCCAA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTATATCAGCCTCTTGCTaGCTTATGATCCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVISASC*LMIPSK
Trigger: CTTGGAAGGGATCATAAGGCAGCAAGAGGCTGATAT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAGATAGTCACCCACTATaGGGTCTCGATCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRDSHPL*GLDHFG
Trigger: TCCAAAATGATCGAGACCGCATAGTGGGTGACTATC...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGAAGCTTATTATTCTCTaGAGCAGCCTCTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKKLIIL*SSLLDE
Trigger: CTCATCCAAGAGGCTGCTGCAGAGAATAATAAGCTT...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTAAGATCTATTATCTGTAAGTATTGCTaGTGCAGATTCTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: FHPTPLRVLRQLLLVRSIICKYC*CRFFNS
Trigger: GGAATTGAAGAATCTGCAGCAGCAATACTTACAGAT...AATAGATCTTACAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCAGGAGAGGTTTTCCTaGCTGAGCTCTTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLQERFS*LSSSCI
Trigger: TATGCAAGAAGAGCTCAGGCAGGAAAACCTCTCCTG...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGGTAGCTGAGAGAAGTTaGTGTTCAGTTGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKVAERS*CSVAEF
Trigger: GAATTCAGCAACTGAACAGCAACTTCTCTCAGCTAC...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTCAGAAAAGCTTTGCTaGGGTTCCCTTAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVSEKLC*GSLSSS
Trigger: TGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTGCTTCAGAAAAGCTTTaGTGCGGTTCCCTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVASEKL*CGSLSS
Trigger: GGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGC...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCAGAGTCCCATTCACTGTaGTCTAACCGTCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSESHSL*SNRLIC
Trigger: GCAGATCAGACGGTTAGAGCACAGTGAATGGGACTC...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCGAGTCCCATTCACTGTaGTCTAACCGTCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIESHSL*SNRLIC
Trigger: GCAGATCAGACGGTTAGAGCACAGTGAATGGGACTC...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCACATGGAACTCAACTGTaGAGCTTGCTCTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSHGTQL*SLLCLC
Trigger: ACACAGGCAGAGCAAGCTGCACAGTTGAGTTCCATG...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCACCCTCAATTTCTGTaGAGCTTGCTCTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPHPQFL*SLLCLC
Trigger: ACACAGGCAGAGCAAGCTGCACAGAAATTGAGGGTG...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614479.4
CDS-3UTR CCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTCCTTATTTTGCAGCTaGCTTTGCAGGCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKSLFCS*LCRLLI
Trigger: GATAAGAAGCCTGCAAAGCCAGCTGCAAAATAAGGA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTTCCTTATTTTGCAGCTaGCTTTGCAGGCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSSLFCS*LCRLLI
Trigger: GATAAGAAGCCTGCAAAGCCAGCTGCAAAATAAGGA...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTTCTGTGAAAGAGCCTaGGACAGTTCTTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKFCERA*DSSSTL
Trigger: TAAAGTGGAAGAACTGTCCCAGGCTCTTTCACAGAA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCGATCCTTCTCCTCGATaGTTTGTTGGAGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLDPSPR*FVGGFP
Trigger: TGGAAACCCTCCAACAAACCATCGAGGAGAAGGATC...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTTAATAAGAGCTGCCTaGAGCTTTCTCTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKLIRAA*SFLFLC
Trigger: GCAGAGAAAGAGAAAGCTCCAGGCAGCTCTTATTAA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTCACTGATTTCTGCTTaGAGCAAATCTATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSSLISA*SKSIWF
Trigger: AAACCAAATAGATTTGCTCCAAGCAGAAATCAGTGA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTTCTGGATAATTGCTTaGTTTTCACTGATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: STSRGQELQCGVRPVRLLFWIIA*FSLISA
Trigger: AGCAGAAATCAGTGAAAACCAAGCAATTATCCAGAA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTTCTGGATAATTGCTTaGTTTTCACTGATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSFWIIA*FSLISA
Trigger: AGCAGAAATCAGTGAAAACCAAGCAATTATCCAGAA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGACTACCTGTACAAGGTaGACTTATCACCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKTTCTR*TYHHCF
Trigger: GAAACAGTGGTGATAAGTCCACCTTGTACAGGTAGT...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGGGAGTTTTCCGTCTATaGATTCCCTTACTTGAATCT +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKGVFRL*IPLLES
Trigger: AGATTCAAGTAAGGGAATCCATAGACGGAAAACTCC...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCGAACACGATTCCTGCTaGTCTGTGCTTGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLEHDSC*SVLGSF
Trigger: AAAACTCCCAAGCACAGACCAGCAGGAATCGTGTTC...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAAGTCTGGGCACAAGTTaGACTCTAAAACAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRSLGTS*TLKQVE
Trigger: CTCAACCTGTTTTAGAGTCCAACTTGTGCCCAGACT...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACCAGCAATTTGTAGTTaGCTGCTTTCCAATTTCTGC +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPPAICS*LLSNFC
Trigger: GCAGAAATTGGAAAGCAGCCAACTACAAATTGCTGG...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATCTCATCATGCTCTTTaGCTTGCATTTCTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPSHHAL*LAFLAV
Trigger: CACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTGTTCAATGGTACCTCTaGCCAAAGACAATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSVQWYL*PKTIPL
Trigger: AAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAAC...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGGTTCAATGGTACCTCTaGCCAAAGACAATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKVQWYL*PKTIPL
Trigger: AAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAAC...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGACCTTCATGCTGGCATTaGAAGAAAGAAGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRPSCWH*KKEVFP
Trigger: TGGAAACACTTCTTTCTTCCAATGCCAGCATGAAGG...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGCGGTCTCGATCATTTTaGAGAGAAGACATGGATTTA +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKRSRSF*REDMDL
Trigger: TAAATCCATGTCTTCTCTCCAAAATGATCGAGACCG...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTCTGCAGCAGCCTCTTaGATGAGTTGGTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVSAAAS*MSWSFS
Trigger: GGAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGA...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATGGGGATGCCTGTCTTTaGTATTGCACTTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDGDACL*YCTLRG
Trigger: GCCTCTCAAAGTGCAATACCAAAGACAGGCATCCCC...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTAAGCTGTCATTGAGCTaGGTCCTGAGAAGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVKLSLS*VLRSSV
Trigger: GACAGAACTTCTCAGGACCCAGCTCAATGACAGCTT...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCCATTCACTTCCTGTCTaGTGTTGCATAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLHSLPV*CCIAAA
Trigger: AGCAGCAGCTATGCAACACCAGACAGGAAGTGAATG...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTCAGCAGCCACTCTTTaGTCTCGTTCTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPSAATL*SRSSSS
Trigger: GCTGGAAGAAGAACGAGACCAAAGAGTGGCTGCTGA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTCATTAGAAAGTAGATaGCTGCTAGAAGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFSLESR*LLEVAL
Trigger: GAGTGCCACTTCTAGCAGCCATCTACTTTCTAATGA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATCATTAGAAAGTAGATaGCTGCTAGAAGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRSLESR*LLEVAL
Trigger: GAGTGCCACTTCTAGCAGCCATCTACTTTCTAATGA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAGAGAAGACCTGTAAATaGGAAGACTGTTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKREKTCK*EDCSTG
Trigger: TCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTC...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTACCATCCTCTTGGCTTaGCTGAAAGACATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVTILLA*LKDIPQ
Trigger: CTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGT...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCAATGGAATTCTATCCTaGCTGTCCTTCTCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVINGILS*LSFSGL
Trigger: TAGACCTGAGAAGGACAGCCAGGATAGAATTCCATT...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
3UTR CAA 72 bp GTCATGGGCAGTTTGGCTTTCATAATCAAGTCTTCTTaGCCTTTCTGCTTCTGCAAGGTTCATTTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: VMGSLAFIIKSS*PFCFCKVHFQL
Trigger: CAACTGGAAATGAACCTTGCAGAAGCAGAAAGGCAAAGAAGACTTGATTATGAAAGCCAAACTGCCCATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCGGAGCCCTCATATTCTaGTCAGTGTCATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIGALIF*SVSSSP
Trigger: AGGAGATGATGACACTGATCAGAATATGAGGGCTCC...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTTCAGACAAAGCAGTaGATGCACTGCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLLQTKQ*MHCCCC
Trigger: ACAACAACAGCAGTGCATTCACTGCTTTGTCTGAAG...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTTCTTCCACTTTACTTaGGATATGCCTTACACGTTC +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKFFHFT*DMPYTF
Trigger: GAACGTGTAAGGCATATCTCAAGTAAAGTGGAAGAA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTTCTTCCACTTTACTTaGGATATGCCTTACACGTTC +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKFFHFT*DMPYTF
Trigger: GAACGTGTAAGGCATATCTCAAGTAAAGTGGAAGAA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCGCTGTTCTGTGGCTTTaGATAAAGGTTCTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIAVLWL*IKVLLN
Trigger: GTTTAGAAGAACCTTTATTCAAAGCCACAGAACAGC...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTTTTCATCATGTGAGCTaGAATCCTTACTTACAGCAG +
Preference number: 4 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSFHHVS*NPYLQQ
Trigger: CTGCTGTAAGTAAGGATTTCAGCTCACATGATGAAA...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTTTCATCATGTGAGCTaGAATCCTTACTTACAGCAG +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIFHHVS*NPYLQQ
Trigger: CTGCTGTAAGTAAGGATTTCAGCTCACATGATGAAA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGCAGCAATTCTTTCTTTaGGCTGATCAATCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLQQFFL*ADQSAV
Trigger: TACAGCAGATTGATCAGCTCAAAGAAAGAATTGCTG...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTTTAAGTTCTGCTAATTaGTTCATAAGCCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSLSSAN*FISLSS
Trigger: GGAAGAGAGGCTTATGAATCAATTAGCAGAACTTAA...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCGGTGTTCAACTGCTTaGGCCAGATTTTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLRCSTA*ARFSLV
Trigger: AACCAAAGAAAATCTGGCTCAAGCAGTTGAACACCG...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCCTTGCTGCTTCACTTTaGGTGTCATCTAGCAGGACT +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQILAASL*VSSSRT
Trigger: AGTCCTGCTAGATGACACTCAAAGTGAAGCAGCAAG...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCCTCACCCTCCATCTGTTTCATTTCTTTCTGGTCAAGGACCTCATGATCTGTCTTCTTCTTTGCTTTaGATCGCATCACTAAACTTC +
Preference number: 4 (lower is better)
Translates to: FPHPPSVSFLSGQGPHDLSSSLL*IASLNF
Trigger: GAAGTTTAGTGATGCGATTCAAAGCAAAGAAGAAGA...CAGATCATGAGGTCCTTGACCAGAAAGAAATGAAACAGATGGAGGGTGAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTTCTTCTTCTTTGCTTTaGATCGCATCACTAAACTTC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSSSSLL*IASLNF
Trigger: GAAGTTTAGTGATGCGATTCAAAGCAAAGAAGAAGA...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGGACATCTGTCTAAGTTaGTCCTTTAGAACACTGCAA +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKDICLS*SFRTLQ
Trigger: TTGCAGTGTTCTAAAGGATCAACTTAGACAGATGTC...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGGACATCTGTCTAAGTTaGTCCTTTAGAACACTGCAA +
Preference number: 4 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLDICLS*SFRTLQ
Trigger: TTGCAGTGTTCTAAAGGATCAACTTAGACAGATGTC...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTGAGATCATCCATATaGCTTCTCAAGCCTCGTATT +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRLRSSI*LLKPRI
Trigger: AATACGAGGCTTGAGAAGTCATATGGATGATCTCAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTTGAGATCATCCATATaGCTTCTCAAGCCTCGTATT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFLRSSI*LLKPRI
Trigger: AATACGAGGCTTGAGAAGTCATATGGATGATCTCAA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTGGCATTCTCAGAATTaGGATCATCCATATGACTTC +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIWHSQN*DHPYDF
Trigger: GAAGTCATATGGATGATCTCAATTCTGAGAATGCCA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTGGCATTCTCAGAATTaGGATCATCCATATGACTTC +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFWHSQN*DHPYDF
Trigger: GAAGTCATATGGATGATCTCAATTCTGAGAATGCCA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTGACCTTCCAAAAGACTaGATTTGTGCTGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLDLPKD*ICAVRP
Trigger: AGGTCTCACAGCACAAATTCAGTCTTTTGGAAGGTC...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCAGTGGAGTTCATTaGAAAGGCGGTTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLLSGVH*KGGFRK
Trigger: CTTTCTGAAACCGCCTTTTCAATGAACTCCACTGAG...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTAAGTTTCTCAAGGTaGGACAAGCTATTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRLSFSR*DKLFSS
Trigger: TGAGGAGAATAGCTTGTCTCACCTTGAGAAACTTAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTGATTCTGCAGATGACTaGGCTGCTGATCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLDSADD*AADLYL
Trigger: CAGATAAAGATCAGCAGCTCAGTCATCTGCAGAATC...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTCTGTTCCACTGGAATTaGTGTTCTGATGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVLFHWN*CSDVRG
Trigger: ACCTCTAACATCAGAACATCAATTCCAGTGGAACAG...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTCCTCTTGGCTTGGCTaGAAGACATTCCTCAGTATC +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQISSWLG*KTFLSI
Trigger: GATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTCCTCTTGGCTTGGCTaGAAGACATTCCTCAGTATC +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPSSWLG*KTFLSI
Trigger: GATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAAGATGTCCTATGAGGTaGCATGTTCATTTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRRCPMR*HVHFPE
Trigger: TTCAGGGAAATGAACATGTCACCTCATAGGACATCT...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCACCTTAGTATACATGTaGTCAAGGGCAAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVITLVYM*SRAKAK
Trigger: CTTTGCTTTTGCCCTTGATCACATGTATACTAAGGT...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCAGAGACAATGGGGCTaGGAAACTGTAATAACTGTC +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVQRQWG*ETVITV
Trigger: GACAGTTATTACAGTTTCTCAGCCCCATTGTCTCTG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTACATCACGTATGCAATaGGAAAATAACCAACTGGTA +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSTSRMQ*ENNQLV
Trigger: TACCAGTTGGTTATTTTCTCATTGCATACGTGATGT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTCCTCAAGCTTCCTTTaGAGCACCCTCAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLSSSFL*STLNFC
Trigger: ACAGAAATTGAGGGTGCTGCAAAGGAAGCTTGAGGA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTCCTCAAGCTTCCTTTaGAGCACCCTCAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVSSSFL*STLNFC
Trigger: ACAGAAATTGAGGGTGCTGCAAAGGAAGCTTGAGGA...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCTTCCTCAAAGTATTATaGTCAGCTTCCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ERRASLSLFKSPCSFNCAFLKVL*SASICC
Trigger: ACAGCAGATGGAAGCTGAGCATAATACTTTGAGGAA...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCATTCTCCTCAGTGACTaGCTGTGTGCCCTCATTATA +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLILLSD*LCALII
Trigger: TATAATGAGGGCACACAGGCAGTCACTGAGGAGAAT...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTCTACCACTCTCTTCTaGAAAGAAGCAATATTCTCC +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVISTTLF*KEAIFS
Trigger: GGAGAATATTGCTTCTTTGCAGAAGAGAGTGGTAGA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTTCTTCTTTGCCTTTCTaGTTCTGCAAGGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSSSLPF*FCKVHF
Trigger: GAAATGAACCTTGCAGAAGCAGAAAGGCAAAGAAGA...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTCACTTTCCTTATTTTaGAGCTGGCTTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVSLSLF*SWLCRL
Trigger: AAGCCTGCAAAGCCAGCTGCAAAATAAGGAAAGTGA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCACTTTACTTGAGATATaGCTTACACGTTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLTLLEI*LTRSAP
Trigger: GGGGGCAGAACGTGTAAGGCATATCTCAAGTAAAGT...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCACTTTACTTGAGATATaGCTTACACGTTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLTLLEI*LTRSAP
Trigger: GGGGGCAGAACGTGTAAGGCATATCTCAAGTAAAGT...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGGAGTCCCCATCACTTaGATCCGTGTTACTTGTGAT +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPGVPIT*IRVTCD
Trigger: ATCACAAGTAACACGGATGCAAGTGATGGGGACTCC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCATTCCTGCTGGTCTGTaGTTGGGAGTTTTCCGTCTA +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIIPAGL*LGVFRL
Trigger: TAGACGGAAAACTCCCAAGCACAGACCAGCAGGAAT...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCCTTTCCAATTTCTGCTaGAGGCTTTCGGCATGGACT +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQILSNFC*RLSAWT
Trigger: AGTCCATGCCGAAAGCCTGCAGCAGAAATTGGAAAG...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTCTGCTTTCCAATTTCTaGTGCAGGCTTTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLLLSNF*CRLSAW
Trigger: CCATGCCGAAAGCCTGCAGCAGAAATTGGAAAGCAG...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCCAATTTGTAGTTGGCTaGTTTCCAATTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIQFVVG*FPISAA
Trigger: TGCAGCAGAAATTGGAAAGCAGCCAACTACAAATTG...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTTTATCCTCTCATCATaGTCTTTGGCTTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQFILSS*SLACIS
Trigger: AGAAATGCAAGCCAAAGAGCATGATGAGAGGATAAA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGTGACTGCCTGTGTGCCCTCATTATAAACATCTGGGAAAGAAGTCTGAGATGCGAAATAAGGGCAGCTTaGAGTTTCCTTTGTATTTGT +
Preference number: 4 (lower is better)
Translates to: SDCLCALIINIWERSLRCEIRAA*SFLCIC
Trigger: ACAAATACAAAGGAAACTGCAAGCTGCCCTTATTTC...GCATCTCAGACTTCTTTCCCAGATGTTTATAATGAGGGCACACAGGCAGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTCTTGTTTGCCTCTGTaGTTCTTAACTTGCCATACA +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVISCLPL*FLTCHT
Trigger: TGTATGGCAAGTTAAGAAGCACAGAGGCAAACAAGA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTCAGCTTCCTGCAACTaGTTTTCTGTCTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLSASCN*FSVSFL
Trigger: CAAGAAGGAGACAGAAAAGCAGTTGCAGGAAGCTGA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCATCTTGCTCAGCTTCCTaGAACTGCTTTTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSSCSAS*NCFSVS
Trigger: GGAGACAGAAAAGCAGTTGCAGGAAGCTGAGCAAGA...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTTGCGGTGTTCAACTaGTTGAGCCAGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRFAVFN*LSQIFF
Trigger: AAAGAAAATCTGGCTCAAGCAGTTGAACACCGCAAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGCTCTTAGTAAAGGCTaGAAGCTGGGTCACAGTACT +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPALSKG*KLGHST
Trigger: AGTACTGTGACCCAGCTTGCAGCCTTTACTAAGAGC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGAAAGGAATCCAACTGTaGCTTTTGCTGAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQKGIQL*LLLNVF
Trigger: GAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGATCTGTAAGTATTGCTaGTGCAGATTCTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKICKYC*CRFFNS
Trigger: GGAATTGAAGAATCTGCAGCAGCAATACTTACAGAT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTCACCACCCTATTCTaGAAGAGACCTAAATCAGAT +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRFTTLF*KRPKSD
Trigger: ATCTGATTTAGGTCTCTTGCAGAATAGGGTGGTGAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATTCACCACCCTATTCTaGAAGAGACCTAAATCAGAT +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPFTTLF*KRPKSD
Trigger: ATCTGATTTAGGTCTCTTGCAGAATAGGGTGGTGAA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTTACTTTCATTTTAATTaGAGCTATTCCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSYFHFN*SYSLTL
Trigger: GAGGGTGAGGGAATAGCTCCAATTAAAATGAAAGTA...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGACACTGACCAATATCTaGTACAGCAGAAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKTLTNI*YSRKGF
Trigger: AAATCCCTTTCTGCTGTACCAGATATTGGTCAGTGT...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCACACTGACCAATATCTaGTACAGCAGAAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVITLTNI*YSRKGF
Trigger: AAATCCCTTTCTGCTGTACCAGATATTGGTCAGTGT...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGAACTCCTCAATCAACTaGTTTAGGTTGCTAATTTCC +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQNSSIN*FRLLIS
Trigger: GGAAATTAGCAACCTAAACCAGTTGATTGAGGAGTT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTCCTTATTTTGCAGCTaGCTTTGCAGGCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVSLFCS*LCRLLI
Trigger: GATAAGAAGCCTGCAAAGCCAGCTGCAAAATAAGGA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGTTCTGGATAATTGCTTaGTTTTCACTGATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RLGETFNGTSGQRQFLLEFWIIA*FSLISA
Trigger: AGCAGAAATCAGTGAAAACCAAGCAATTATCCAGAA...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAACTACCTGTACAAGGTaGACTTATCACCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRTTCTR*TYHHCF
Trigger: GAAACAGTGGTGATAAGTCCACCTTGTACAGGTAGT...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTACTACCTGTACAAGGTaGACTTATCACCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVTTCTR*TYHHCF
Trigger: GAAACAGTGGTGATAAGTCCACCTTGTACAGGTAGT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAGGAGTTTTCCGTCTATaGATTCCCTTACTTGAATCT +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRGVFRL*IPLLES
Trigger: AGATTCAAGTAAGGGAATCCATAGACGGAAAACTCC...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCGAACACGATTCCTGCTaGTCTGTGCTTGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIEHDSC*SVLGSF
Trigger: AAAACTCCCAAGCACAGACCAGCAGGAATCGTGTTC...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCCTTCTAAACCTGGAGTaGAAGAACACGATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLLLNLE*KNTIPA
Trigger: AGCAGGAATCGTGTTCTTCCACTCCAGGTTTAGAAG...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCTTCTAAACCTGGAGTaGAAGAACACGATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVLLNLE*KNTIPA
Trigger: AGCAGGAATCGTGTTCTTCCACTCCAGGTTTAGAAG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCAGTCTGGGCACAAGTTaGACTCTAAAACAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLSLGTS*TLKQVE
Trigger: CTCAACCTGTTTTAGAGTCCAACTTGTGCCCAGACT...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTCCAGCAATTTGTAGTTaGCTGCTTTCCAATTTCTGC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVPAICS*LLSNFC
Trigger: GCAGAAATTGGAAAGCAGCCAACTACAAATTGCTGG...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTCAGTGACATTCGTTTaGTTATCATGTTTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVISVTFV*LSCFSV
Trigger: CACCGAGAAACATGATAACCAAACGAATGTCACTGA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTCAGTGACATTCGTTTaGTTATCATGTTTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKSVTFV*LSCFSV
Trigger: CACCGAGAAACATGATAACCAAACGAATGTCACTGA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTACTTACAGCAGGGTTaGCACTCTTCGCTGATGGAA +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPYLQQG*HSSLME
Trigger: TTCCATCAGCGAAGAGTGCCAACCCTGCTGTAAGTA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAATTGTCTCTTCCAAGTaGACTTTTTCTCTGCGCAAA +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPIVSSK*TFSLRK
Trigger: TTTGCGCAGAGAAAAAGTCCACTTGGAAGAGACAAT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAATTGTCTCTTCCAAGTaGACTTTTTCTCTGCGCAAA +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRIVSSK*TFSLRK
Trigger: TTTGCGCAGAGAAAAAGTCCACTTGGAAGAGACAAT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACGGTCTCGATCATTTTaGAGAGAAGACATGGATTTA +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPRSRSF*REDMDL
Trigger: TAAATCCATGTCTTCTCTCCAAAATGATCGAGACCG...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAAGGTCTTCTCTATATTaGATCAGTTCTGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPRSSLY*ISSASS
Trigger: GCTAGATGCAGAACTGATCCAATATAGAGAAGACCT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTAGCTATTCTCCTCAGTaGAGTTCATTGAAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVSYSPQ*SSLKRR
Trigger: CCGCCTTTTCAATGAACTCCACTGAGGAGAATAGCT...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCATTCACTTCCTGTCTaGTGTTGCATAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPHSLPV*CCIAAA
Trigger: AGCAGCAGCTATGCAACACCAGACAGGAAGTGAATG...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR CAA 72 bp TTTCTCAGTCATACTAAAGCTGATTTCTGTCACTTGTaGATCCTTCTCCTCGATGGTTTGTTGGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: FLSHTKADFCHL*ILLLDGLLEGF
Trigger: GAAACCCTCCAACAAACCATCGAGGAGAAGGATCAACAAGTGACAGAAATCAGCTTTAGTATGACTGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp CAGCAGGTTTTCCAGCTCTTTAATTTCTTTATCATGTaGCTGACGCAGTTCAGCAATAGCTACTTGGATTGC +
Preference number: 4 (lower is better)
Translates to: QQVFQLFNFFIM*LTQFSNSYLDC
Trigger: GCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATTAAAGAGCTGGAAAACCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp CTGTTGATAGTCACCCACTATGCGGTCTCGATCATTTaGGAGAGAAGACATGGATTTAACAAAGGAATCCAA +
Preference number: 4 (lower is better)
Translates to: LLIVTHYAVSII*ERRHGFNKGIQ
Trigger: TTGGATTCCTTTGTTAAATCCATGTCTTCTCTCCAAAATGATCGAGACCGCATAGTGGGTGACTATCAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp AAGCTTATTATTCTCTGCAGCAGCCTCTTGGATGAGTaGGTCTTTTTCCAAGATTATAGAGAGATGTCGCTC +
Preference number: 4 (lower is better)
Translates to: KLIILCSSLLDE*VFFQDYREMSL
Trigger: GAGCGACATCTCTCTATAATCTTGGAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGAGAATAATAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp GATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTaGAGGGGAGTGGTCCAAAGAGTAACAACTAAGTCT +
Preference number: 4 (lower is better)
Translates to: DVLMLEVREFQV*RGVVQRVTTKS
Trigger: AGACTTAGTTGTTACTCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGAGAAGCTTTGAATTTTaGTCCTTTAGAGCATCACAG +
Preference number: 4 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLRSFEF*SFRASQ
Trigger: CTGTGATGCTCTAAAGGATCAAAATTCAAAGCTTCT...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGAGAAGCTTTGAATTTTaGTCCTTTAGAGCATCACAG +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKRSFEF*SFRASQ
Trigger: CTGTGATGCTCTAAAGGATCAAAATTCAAAGCTTCT...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTCTAGGAGAGTAATCTaGGAAGACAGTTTTTCATTC +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKSRRVI*EDSFSF
Trigger: GAATGAAAAACTGTCTTCTCAGATTACTCTCCTAGA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCAATGCAATTTCCTCTTaGGCTTCTTTCATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFNAISS*ASFISN
Trigger: GTTGGAAATGAAAGAAGCTCAAGAGGAAATTGCATT...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAATTTCTTGTGCTTTATaGAAGTTTAGCTCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRISCAL*KFSSSS
Trigger: GGAGCTCGAGCTAAACTTTCATAAAGCACAAGAAAT...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCCTTCAGACAAAGCAGTaGATGCACTGCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQILQTKQ*MHCCCC
Trigger: ACAACAACAGCAGTGCATTCACTGCTTTGTCTGAAG...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCATTTGGCTTCTATGCTaGGACTATGGATCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLIWLLC*DYGSVQ
Trigger: CTGAACAGATCCATAGTCTCAGCATAGAAGCCAAAT...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATTCTTCCACTTTACTTaGGATATGCCTTACACGTTC +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRFFHFT*DMPYTF
Trigger: GAACGTGTAAGGCATATCTCAAGTAAAGTGGAAGAA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCTTCTTCCAATCTACTaGCTCTTTGCAGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPLLPIY*LFAEAP
Trigger: AGGAGCTTCTGCAAAGAGTCAGTAGATTGGAAGAAG...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCATCTGATTCATCTGTTTaGCCAGAGCCTGGAATTGCT +
Preference number: 4 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSSDSSV*PEPGIA
Trigger: AGCAATTCCAGGCTCTGGTCAAACAGATGAATCAGA...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTTTCATACTCCATTTTaGCCCTTTCAAGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFFHTPF*PFQVLP
Trigger: AGGAAGAACTTGAAAGGGTCAAAATGGAGTATGAAA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGTTAAGTTCTGCTAATTaGTTCATAAGCCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLLSSAN*FISLSS
Trigger: GGAAGAGAGGCTTATGAATCAATTAGCAGAACTTAA...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTTAAGTTTCTCAAGGTaGGACAAGCTATTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVLSFSR*DKLFSS
Trigger: TGAGGAGAATAGCTTGTCTCACCTTGAGAAACTTAA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTAGTTGTGAGGACAAGTaGAGCAATTGCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVSCEDK*SNCSSL
Trigger: CAAAGATGAGCAATTGCTTCACTTGTCCTCACAACT...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCCTGCTGATCTTTATCTaGGATAGCCATAAGGTACTG +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLLLIFI*DSHKVL
Trigger: CAGTACCTTATGGCTATCTCAGATAAAGATCAGCAG...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCCTTAACTCCTTTTGGTaGATTTCCTTTAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVILNSFW*ISFKLS
Trigger: TGACAGCTTAAAGGAAATTCACCAAAAGGAGTTAAG...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCCCTCCAATTATATCTaGAATTGGCAGGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVPSNYI*NWQGRR
Trigger: TCTTCTTCCCTGCCAATTTCAGATATAATTGGAGGG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAACCTTAGTATACATGTaGTCAAGGGCAAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRTLVYM*SRAKAK
Trigger: CTTTGCTTTTGCCCTTGATCACATGTATACTAAGGT...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGACATCACGTATGCAATaGGAAAATAACCAACTGGTA +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKTSRMQ*ENNQLV
Trigger: TACCAGTTGGTTATTTTCTCATTGCATACGTGATGT...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCGTAGAACTCTTGTCATaGTTGGAAAGTTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLVELLS*LESCSS
Trigger: AGAGGAGCAACTTTCCAAGCATGACAAGAGTTCTAC...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTTCTCCTGGAGCTGTTaGTTCATCATTACAAATTCT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFFSWSC*FIITNS
Trigger: AGAATTTGTAATGATGAAGCAACAGCTCCAGGAGAA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTTCTCCTGGAGCTGTTaGTTCATCATTACAAATTCT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKFSWSC*FIITNS
Trigger: AGAATTTGTAATGATGAAGCAACAGCTCCAGGAGAA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCCTTCTCTTCCATTTCTaGTTTGTGCTTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLLLFHF*FVLLLQ
Trigger: TTGGAGCAGAAGCACAAAGCAGAAATGGAAGAGAAG...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGGAAAGAAGTCTGAGATaGTGTTTCATGTTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKERSLR*CFMLLQ
Trigger: TTGCAACAACATGAAACAGCATCTCAGACTTCTTTC...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATACTTTGATGTTCAGTaGTCGCCTGTTCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPYFDVQ*SPVLFQ
Trigger: TTGAAAAAGAACAGGCGAGCACTGAACATCAAAGTA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTACTTTGATGTTCAGTaGTCGCCTGTTCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFYFDVQ*SPVLFQ
Trigger: TTGAAAAAGAACAGGCGAGCACTGAACATCAAAGTA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCAAGACAAAGCAGTGAATaGACTGCTGTTGTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSRQSSE*TAVVVS
Trigger: GCTGACAACAACAGCAGTGCATTCACTGCTTTGTCT...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATCTGTTAATAAGAGCTaGCTGGAGCTTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRSVNKS*LELSLS
Trigger: AGAAAGAGAAAGCTCCAGGCAGCTCTTATTAACAGA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGAAATCCTTCCTTATATaGTGTAGTTCCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKKSFLI*CSSTSF
Trigger: GAAAGAAGTGGAACTACAGCATATAAGGAAGGATTT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTCATCCAGTTTAGGTTaGAATTCTCTTAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKSSSLG*NSLRCS
Trigger: AGAACATCTAAGAGAATTGCAACCTAAACTGGATGA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTTTATCCTCTCATCATaGTCTTTGGCTTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFFILSS*SLACIS
Trigger: AGAAATGCAAGCCAAAGAGCATGATGAGAGGATAAA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGATCTCTTCTGGTTTTTaGTTCATTTCACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQISSGF*FISQSS
Trigger: GGAACTTTGTGAAATGAAGCAAAAACCAGAAGAGAT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGGAAATAAGGGCAGCTTaGAGTTTCCTTTGTATTTGT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKEIRAA*SFLCIC
Trigger: ACAAATACAAAGGAAACTGCAAGCTGCCCTTATTTC...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAGAAATAAGGGCAGCTTaGAGTTTCCTTTGTATTTGT +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPEIRAA*SFLCIC
Trigger: ACAAATACAAAGGAAACTGCAAGCTGCCCTTATTTC...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATCTTGTTTGCCTCTGTaGTTCTTAACTTGCCATACA +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRSCLPL*FLTCHT
Trigger: TGTATGGCAAGTTAAGAAGCACAGAGGCAAACAAGA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTCTTGTTTGCCTCTGTaGTTCTTAACTTGCCATACA +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVSCLPL*FLTCHT
Trigger: TGTATGGCAAGTTAAGAAGCACAGAGGCAAACAAGA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGAGCTCTAGGATTTTCTaGTGTTTAGATTTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQSSRIF*CLDLAN
Trigger: GTTTGCTAAATCTAAACAGCAGAAAATCCTAGAGCT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTTTGCGGTGTTCAACTaGTTGAGCCAGATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVFAVFN*LSQIFF
Trigger: AAAGAAAATCTGGCTCAAGCAGTTGAACACCGCAAA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCAAAGGAATCCAACTGTaGCTTTTGCTGAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFKGIQL*LLLNVF
Trigger: GAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTT...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGATAGTCACCCACTATaGGGTCTCGATCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPDSHPL*GLDHFG
Trigger: TCCAAAATGATCGAGACCGCATAGTGGGTGACTATC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTAAGCTTATTATTCTCTaGAGCAGCCTCTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVKLIIL*SSLLDE
Trigger: CTCATCCAAGAGGCTGCTGCAGAGAATAATAAGCTT...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGAAAGTACCTTCTTCTTaGAAGGCTGTTACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKKVPSS*KAVTCL
Trigger: AAGACAAGTAACAGCCTTGCAAGAAGAAGGTACTTT...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAAAAGTACCTTCTTCTTaGAAGGCTGTTACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRKVPSS*KAVTCL
Trigger: AAGACAAGTAACAGCCTTGCAAGAAGAAGGTACTTT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTATTTCTCATTATCCCTaGATCATGATGAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSISHYP*IMMKML
Trigger: AAGCATCTTCATCATGATGCAGGGATAATGAGAAAT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTGTAAGTATTGCTGCTaGAGATTCTTCAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFCKYCC*RFFNSF
Trigger: GAAGGAATTGAAGAATCTGCAGCAGCAATACTTACA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTCAGGAGAGGTTTTCCTaGCTGAGCTCTTCTTGCATA +
Preference number: 4 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLQERFS*LSSSCI
Trigger: TATGCAAGAAGAGCTCAGGCAGGAAAACCTCTCCTG...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTCCATGTCAGATTCTTaGTGTAATTCAGGGTCTAGG +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVSMSDS*CNSGSR
Trigger: CCTAGACCCTGAATTACACCAAGAATCTGACATGGA...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340645.9
ENST00000393667.7
CDS-3UTR CCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTTTCCAGTAGAATCTTaGACTCCTCTCTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIFPVES*TPLFLF
Trigger: AAACAGAAAGAGAGGAGTCCAAGATTCTACTGGAAA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTCAGCCCTTTTTCCCTaGAGCTGTAATTTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFSALFP*SCNLRN
Trigger: ATTTCTTAAATTACAGCTCCAGGGAAAAAGGGCTGA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTACTTTCATTTTAATTaGAGCTATTCCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIYFHFN*SYSLTL
Trigger: GAGGGTGAGGGAATAGCTCCAATTAAAATGAAAGTA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTTCTTTTTCAACTGCTaGAAGACTGCTCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFFFFNC*KTALFI
Trigger: AATGAAGAGAGCAGTCTTCCAGCAGTTGAAAAAGAA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTTGCTTCCTCAGCTCTaGATAATAAATTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQLLPQL*IINLAV
Trigger: AACAGCTAAATTTATTATCCAGAGCTGAGGAAGCAA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCACTTATTTGTCCTGCTaGGCTCATCTCATCATAATT +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFTYLSC*AHLIII
Trigger: AATTATGATGAGATGAGCCCAGCAGGACAAATAAGT...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAACTTATTTGTCCTGCTaGGCTCATCTCATCATAATT +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPTYLSC*AHLIII
Trigger: AATTATGATGAGATGAGCCCAGCAGGACAAATAAGT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTTAATAAGAGCTGCCTaGAGCTTTCTCTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLLIRAA*SFLFLC
Trigger: GCAGAGAAAGAGAAAGCTCCAGGCAGCTCTTATTAA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTAATAAGAGCTGCCTaGAGCTTTCTCTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVLIRAA*SFLFLC
Trigger: GCAGAGAAAGAGAAAGCTCCAGGCAGCTCTTATTAA...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTGGAGTTGCCTTAGCTaGTCTCCAATATTCTCATTT +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVWSCLS*SPIFSF
Trigger: AAATGAGAATATTGGAGACCAGCTAAGGCAACTCCA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCCCAGCAATTTGTAGTTaGCTGCTTTCCAATTTCTGC +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLPAICS*LLSNFC
Trigger: GCAGAAATTGGAAAGCAGCCAACTACAAATTGCTGG...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTGTTCAATGGTACCTCTaGCCAAAGACAATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLVQWYL*PKTIPL
Trigger: AAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAAC...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATCAGTGACATTCGTTTaGTTATCATGTTTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRSVTFV*LSCFSV
Trigger: CACCGAGAAACATGATAACCAAACGAATGTCACTGA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGCTTAAATCAGTCAACTaGTCTTTGAGACTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: VFAGTFREELERRPVNGKLKSVN*SLRLLS
Trigger: ACTTAAGAGTCTCAAAGACCAGTTGACTGATTTAAG...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCGCCTCTTGGATGAGTTaGTCTTTTTCCAAGATTATA +
Preference number: 4 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIASWMS*SFSKII
Trigger: TATAATCTTGGAAAAAGACCAACTCATCCAAGAGGC...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAGCCTCTTGGATGAGTTaGTCTTTTTCCAAGATTATA +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPASWMS*SFSKII
Trigger: TATAATCTTGGAAAAAGACCAACTCATCCAAGAGGC...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTAGGTCTTCTCTATATTaGATCAGTTCTGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVRSSLY*ISSASS
Trigger: GCTAGATGCAGAACTGATCCAATATAGAGAAGACCT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAGAAGCTGCTTTTGTTaGCTGTCCTTTATTGTTATC +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKRSCFC*LSFIVI
Trigger: GATAACAATAAAGGACAGCCAACAAAAGCAGCTTCT...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATGAGAAGACCTGTAAATaGGAAGACTGTTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDEKTCK*EDCSTG
Trigger: TCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTC...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCGGGAATAGGCACAAATaGAATTCTATCCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIGNRHK*NSILAV
Trigger: GACAGCCAGGATAGAATTCCATTTGTGCCTATTCCC...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTTCAGATGTTCTACTTTaGTGTTCAGTGCTCGCCTGT +
Preference number: 4 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLSDVLL*CSVLAC
Trigger: ACAGGCGAGCACTGAACATCAAAGTAGAACATCTGA...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTACCATCCTGCTTTGTTaGTTTCAATTCTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPTILLC*FQFYSS
Trigger: GCTGGAGTAGAATTGAAATCAACAAAGCAGGATGGT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCAACCATCCTGCTTTGTTaGTTTCAATTCTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSTILLC*FQFYSS
Trigger: GCTGGAGTAGAATTGAAATCAACAAAGCAGGATGGT...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTCTTCAGACAAAGCAGTaGATGCACTGCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLLQTKQ*MHCCCC
Trigger: ACAACAACAGCAGTGCATTCACTGCTTTGTCTGAAG...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTGCTGTTCTGTGGCTTTaGATAAAGGTTCTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVAVLWL*IKVLLN
Trigger: GTTTAGAAGAACCTTTATTCAAAGCCACAGAACAGC...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTTTCATACTCCATTTTaGCCCTTTCAAGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVFHTPF*PFQVLP
Trigger: AGGAAGAACTTGAAAGGGTCAAAATGGAGTATGAAA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATTTCATACTCCATTTTaGCCCTTTCAAGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRFHTPF*PFQVLP
Trigger: AGGAAGAACTTGAAAGGGTCAAAATGGAGTATGAAA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTTTCATCATGTGAGCTaGAATCCTTACTTACAGCAG +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLFHHVS*NPYLQQ
Trigger: CTGCTGTAAGTAAGGATTTCAGCTCACATGATGAAA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCAGCAATTCTTTCTTTaGGCTGATCAATCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVQQFFL*ADQSAV
Trigger: TACAGCAGATTGATCAGCTCAAAGAAAGAATTGCTG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTTGGTTACTTCCTCCTaGAGCATTTTTAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLLVTSS*SIFSSP
Trigger: TGGTGAACTAAAAATGCTTCAGGAGGAAGTAACCAA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGCACTAATTTTCTCTTaGTACCTGATGCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPALIFS*YLMQSF
Trigger: GAAGGACTGCATCAGGTATCAAGAGAAAATTAGTGC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTCTTTATCATGTTGCTaGCGCAGTTCAGCAATAGCT +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQISLSCC*RSSAIA
Trigger: AGCTATTGCTGAACTGCGTCAGCAACATGATAAAGA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGACTTAACTCCTTTTGGTaGATTTCCTTTAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRLNSFW*ISFKLS
Trigger: TGACAGCTTAAAGGAAATTCACCAAAAGGAGTTAAG...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTCTTAACTCCTTTTGGTaGATTTCCTTTAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVLNSFW*ISFKLS
Trigger: TGACAGCTTAAAGGAAATTCACCAAAAGGAGTTAAG...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCTGTTCCACTGGAATTaGTGTTCTGATGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPLFHWN*CSDVRG
Trigger: ACCTCTAACATCAGAACATCAATTCCAGTGGAACAG...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTTTCCTCAAAGTATTATaGTCAGCTTCCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLFLKVL*SASICC
Trigger: ACAGCAGATGGAAGCTGAGCATAATACTTTGAGGAA...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTTCTGCTTTGTGCTTCTaGTCCAAAGCACTATACCGA +
Preference number: 4 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLSALCF*SKALYR
Trigger: TCGGTATAGTGCTTTGGAGCAGAAGCACAAAGCAGA...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCCTTCTCTTCCATTTCTaGTTTGTGCTTCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQILLFHF*FVLLLQ
Trigger: TTGGAGCAGAAGCACAAAGCAGAAATGGAAGAGAAG...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTGAAAGAAGTCTGAGATaGTGTTTCATGTTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVERSLR*CFMLLQ
Trigger: TTGCAACAACATGAAACAGCATCTCAGACTTCTTTC...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTCTACCACTCTCTTCTaGAAAGAAGCAATATTCTCC +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLSTTLF*KEAIFS
Trigger: GGAGAATATTGCTTCTTTGCAGAAGAGAGTGGTAGA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCCAACTGCTGGAAGACTaGTCTCTTCATTTGGCATTA +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIQLLED*SLHLAL
Trigger: TAATGCCAAATGAAGAGAGCAGTCTTCCAGCAGTTG...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTCTTCTTTGCCTTTCTaGTTCTGCAAGGTTCATTTC +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVSSLPF*FCKVHF
Trigger: GAAATGAACCTTGCAGAAGCAGAAAGGCAAAGAAGA...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCAATTTGTAGTTGGCTaGTTTCCAATTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVQFVVG*FPISAA
Trigger: TGCAGCAGAAATTGGAAAGCAGCCAACTACAAATTG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATCATCCAGTTTAGGTTaGAATTCTCTTAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPSSSLG*NSLRCS
Trigger: AGAACATCTAAGAGAATTGCAACCTAAACTGGATGA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATCATCCAGTTTAGGTTaGAATTCTCTTAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRSSSLG*NSLRCS
Trigger: AGAACATCTAAGAGAATTGCAACCTAAACTGGATGA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTATTTTAGTGAGAGCTaGTTCTTTCTCACTAAGTTG +
Preference number: 4 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFYFSES*FFLTKL
Trigger: CAACTTAGTGAGAAAGAAGCAGCTCTCACTAAAATA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATATTTTAGTGAGAGCTaGTTCTTTCTCACTAAGTTG +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPYFSES*FFLTKL
Trigger: CAACTTAGTGAGAAAGAAGCAGCTCTCACTAAAATA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATATTTTAGTGAGAGCTaGTTCTTTCTCACTAAGTTG +
Preference number: 4 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRYFSES*FFLTKL
Trigger: CAACTTAGTGAGAAAGAAGCAGCTCTCACTAAAATA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTTTATCCTCTCATCATaGTCTTTGGCTTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVFILSS*SLACIS
Trigger: AGAAATGCAAGCCAAAGAGCATGATGAGAGGATAAA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCATCTCTTCTGGTTTTTaGTTCATTTCACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ERRASLSLFKSPCSFNCAISSGF*FISQSS
Trigger: GGAACTTTGTGAAATGAAGCAAAAACCAGAAGAGAT...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATATTTATTTCTTCATaGAGCCTACTGGTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKIFISS*SLLVSS
Trigger: AGAACTGACCAGTAGGCTGCATGAAGAAATAAATAT...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCATATTTATTTCTTCATaGAGCCTACTGGTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ERRASLSLFKSPCSFNCAIFISS*SLLVSS
Trigger: AGAACTGACCAGTAGGCTGCATGAAGAAATAAATAT...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAATATTTATTTCTTCATaGAGCCTACTGGTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPIFISS*SLLVSS
Trigger: AGAACTGACCAGTAGGCTGCATGAAGAAATAAATAT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTAATAGCTACTTGGATTaGCTCTTCCTTGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPNSYLD*LFLARK
Trigger: CTTTCTGGCAAGGAAGAGGCAATCCAAGTAGCTATT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCAAATAGCTACTTGGATTaGCTCTTCCTTGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSNSYLD*LFLARK
Trigger: CTTTCTGGCAAGGAAGAGGCAATCCAAGTAGCTATT...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATAAGCTTATTATTCTCTaGAGCAGCCTCTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDKLIIL*SSLLDE
Trigger: CTCATCCAAGAGGCTGCTGCAGAGAATAATAAGCTT...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTAAAGTACCTTCTTCTTaGAAGGCTGTTACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVKVPSS*KAVTCL
Trigger: AAGACAAGTAACAGCCTTGCAAGAAGAAGGTACTTT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTTCTCATTATCCCTaGATCATGATGAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKISHYP*IMMKML
Trigger: AAGCATCTTCATCATGATGCAGGGATAATGAGAAAT...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCGTAGCTGAGAGAAGTTaGTGTTCAGTTGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIVAERS*CSVAEF
Trigger: GAATTCAGCAACTGAACAGCAACTTCTCTCAGCTAC...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGTAGCTGAGAGAAGTTaGTGTTCAGTTGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPVAERS*CSVAEF
Trigger: GAATTCAGCAACTGAACAGCAACTTCTCTCAGCTAC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTTTCACCACCCTATTCTaGAAGAGACCTAAATCAGAT +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLFTTLF*KRPKSD
Trigger: ATCTGATTTAGGTCTCTTGCAGAATAGGGTGGTGAA...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTAACTCTTGTCATGCTTaGAAAGTTGCTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPNSCHA*KVAPLT
Trigger: AGTCAGAGGAGCAACTTTCCAAGCATGACAAGAGTT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATACTTTCATTTTAATTaGAGCTATTCCCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRYFHFN*SYSLTL
Trigger: GAGGGTGAGGGAATAGCTCCAATTAAAATGAAAGTA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTTCTTTTTCAACTGCTaGAAGACTGCTCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVFFFNC*KTALFI
Trigger: AATGAAGAGAGCAGTCTTCCAGCAGTTGAAAAAGAA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCACACTGACCAATATCTaGTACAGCAGAAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLTLTNI*YSRKGF
Trigger: AAATCCCTTTCTGCTGTACCAGATATTGGTCAGTGT...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTAACTCCTCAATCAACTaGTTTAGGTTGCTAATTTCC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVNSSIN*FRLLIS
Trigger: GGAAATTAGCAACCTAAACCAGTTGATTGAGGAGTT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTTCTGTGAAAGAGCCTaGGACAGTTCTTCCACTTTA +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIFCERA*DSSSTL
Trigger: TAAAGTGGAAGAACTGTCCCAGGCTCTTTCACAGAA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTTGCTTCCTCAGCTCTaGATAATAAATTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKLLPQL*IINLAV
Trigger: AACAGCTAAATTTATTATCCAGAGCTGAGGAAGCAA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATTGCTTCCTCAGCTCTaGATAATAAATTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPLLPQL*IINLAV
Trigger: AACAGCTAAATTTATTATCCAGAGCTGAGGAAGCAA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATTTAATAAGAGCTGCCTaGAGCTTTCTCTTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDLIRAA*SFLFLC
Trigger: GCAGAGAAAGAGAAAGCTCCAGGCAGCTCTTATTAA...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTCACTGATTTCTGCTTaGAGCAAATCTATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKSLISA*SKSIWF
Trigger: AAACCAAATAGATTTGCTCCAAGCAGAAATCAGTGA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCACTACCTGTACAAGGTaGACTTATCACCACTGTTTC +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQITTCTR*TYHHCF
Trigger: GAAACAGTGGTGATAAGTCCACCTTGTACAGGTAGT...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTGGAGTTGCCTTAGCTaGTCTCCAATATTCTCATTT +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVWSCLS*SPIFSF
Trigger: AAATGAGAATATTGGAGACCAGCTAAGGCAACTCCA...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTGGAGTTGCCTTAGCTaGTCTCCAATATTCTCATTT +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLWSCLS*SPIFSF
Trigger: AAATGAGAATATTGGAGACCAGCTAAGGCAACTCCA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCGTTCAATGGTACCTCTaGCCAAAGACAATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIVQWYL*PKTIPL
Trigger: AAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAAC...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTATTGTCTCTTCCAAGTaGACTTTTTCTCTGCGCAAA +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVIVSSK*TFSLRK
Trigger: TTTGCGCAGAGAAAAAGTCCACTTGGAAGAGACAAT...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AATTTCTTTATCATGTTGCTGACGCAGTTCAGCAATAGCTACTTGGATTGCCTCCGTGTCTCTTCTAGCTaGGACAAAAGTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: NFFIMLLTQFSNSYLDCLRVSSS*DKSSLF
Trigger: AAACAAAGAACTTTTGTCCCAGCTAGAAGAGACACG...GAGGCAATCCAAGTAGCTATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCCGTGTCTCTTCTAGCTaGGACAAAAGTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLRVSSS*DKSSLF
Trigger: AAACAAAGAACTTTTGTCCCAGCTAGAAGAGACACG...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTAGAAGCTGCTTTTGTTaGCTGTCCTTTATTGTTATC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVRSCFC*LSFIVI
Trigger: GATAACAATAAAGGACAGCCAACAAAAGCAGCTTCT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTCATTAGAAAGTAGATaGCTGCTAGAAGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPSLESR*LLEVAL
Trigger: GAGTGCCACTTCTAGCAGCCATCTACTTTCTAATGA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR CAA 72 bp AAGCTGCTTTTGTTGGCTGTCCTTTATTGTTATCACTaGGTTCAGGTCTTCTCTATATTGGATCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KLLLLAVLYCYH*VQVFSILDQFC
Trigger: GCAGAACTGATCCAATATAGAGAAGACCTGAACCAAGTGATAACAATAAAGGACAGCCAACAAAAGCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTAATGCAATTTCCTCTTaGGCTTCTTTCATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLNAISS*ASFISN
Trigger: GTTGGAAATGAAAGAAGCTCAAGAGGAAATTGCATT...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCATTGGTTACTTCCTCCTaGAGCATTTTTAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSLVTSS*SIFSSP
Trigger: TGGTGAACTAAAAATGCTTCAGGAGGAAGTAACCAA...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTCTTCTTCTTTGCTTTaGATCGCATCACTAAACTTC +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVSSSLL*IASLNF
Trigger: GAAGTTTAGTGATGCGATTCAAAGCAAAGAAGAAGA...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCGACATCTGTCTAAGTTaGTCCTTTAGAACACTGCAA +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIDICLS*SFRTLQ
Trigger: TTGCAGTGTTCTAAAGGATCAACTTAGACAGATGTC...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR TCA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATTTGAGATCATCCATATaGCTTCTCAAGCCTCGTATT +
Preference number: 4 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDLRSSI*LLKPRI
Trigger: AATACGAGGCTTGAGAAGTCATATGGATGATCTCAA...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTGAAAGAAGTCTGAGATaGTGTTTCATGTTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVERSLR*CFMLLQ
Trigger: TTGCAACAACATGAAACAGCATCTCAGACTTCTTTC...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTACTTTGATGTTCAGTaGTCGCCTGTTCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLYFDVQ*SPVLFQ
Trigger: TTGAAAAAGAACAGGCGAGCACTGAACATCAAAGTA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTTCATGCTCTTTGGCTTaGATTTCTAGCTGTGTATGC +
Preference number: 4 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLSCSLA*ISSCVC
Trigger: GCATACACAGCTAGAAATGCAAGCCAAAGAGCATGA...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCGAAATAAGGGCAGCTTaGAGTTTCCTTTGTATTTGT +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLEIRAA*SFLCIC
Trigger: ACAAATACAAAGGAAACTGCAAGCTGCCCTTATTTC...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTAGCTCTAGGATTTTCTaGTGTTTAGATTTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVSSRIF*CLDLAN
Trigger: GTTTGCTAAATCTAAACAGCAGAAAATCCTAGAGCT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCAACTCCTCAATCAACTaGTTTAGGTTGCTAATTTCC +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLNSSIN*FRLLIS
Trigger: GGAAATTAGCAACCTAAACCAGTTGATTGAGGAGTT...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTACTTATTTGTCCTGCTaGGCTCATCTCATCATAATT +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVTYLSC*AHLIII
Trigger: AATTATGATGAGATGAGCCCAGCAGGACAAATAAGT...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCGGAGTTTTCCGTCTATaGATTCCCTTACTTGAATCT +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIGVFRL*IPLLES
Trigger: AGATTCAAGTAAGGGAATCCATAGACGGAAAACTCC...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCAGGAGTTTTCCGTCTATaGATTCCCTTACTTGAATCT +
Preference number: 4 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSGVFRL*IPLLES
Trigger: AGATTCAAGTAAGGGAATCCATAGACGGAAAACTCC...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTCAGTGACATTCGTTTaGTTATCATGTTTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQISVTFV*LSCFSV
Trigger: CACCGAGAAACATGATAACCAAACGAATGTCACTGA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCACGGTCTCGATCATTTTaGAGAGAAGACATGGATTTA +
Preference number: 4 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSRSRSF*REDMDL
Trigger: TAAATCCATGTCTTCTCTCCAAAATGATCGAGACCG...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CCA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTGCCTCTTGGATGAGTTaGTCTTTTTCCAAGATTATA +
Preference number: 4 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVASWMS*SFSKII
Trigger: TATAATCTTGGAAAAAGACCAACTCATCCAAGAGGC...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR CAA 72 bp CTGGTACAGCAGAAAGGGATTTATCACCATCCTGCTTaGTTGATTTCAATTCTACTCCAGCATCATTTAAAG +
Preference number: 4 (lower is better)
Translates to: LVQQKGIYHHPA*LISILLQHHLK
Trigger: CTTTAAATGATGCTGGAGTAGAATTGAAATCAACAAAGCAGGATGGTGATAAATCCCTTTCTGCTGTACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTCTTCTTCTTTGCTTTaGATCGCATCACTAAACTTC +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPSSSLL*IASLNF
Trigger: GAAGTTTAGTGATGCGATTCAAAGCAAAGAAGAAGA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR TCA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTTGGCATTCTCAGAATTaGGATCATCCATATGACTTC +
Preference number: 4 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLWHSQN*DHPYDF
Trigger: GAAGTCATATGGATGATCTCAATTCTGAGAATGCCA...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR TCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCTTAACTCCTTTTGGTaGATTTCCTTTAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPLNSFW*ISFKLS
Trigger: TGACAGCTTAAAGGAAATTCACCAAAAGGAGTTAAG...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCATTCTCCTGGAGCTGTTaGTTCATCATTACAAATTCT +
Preference number: 4 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSFSWSC*FIITNS
Trigger: AGAATTTGTAATGATGAAGCAACAGCTCCAGGAGAA...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR GCA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCATCTCTTCTGGTTTTTaGTTCATTTCACAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLISSGF*FISQSS
Trigger: GGAACTTTGTGAAATGAAGCAAAAACCAGAAGAGAT...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTCCTTCTGTAGCTaGTTTACTTCTTGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPQSFCS*FTSCCF
Trigger: AAAACAACAAGAAGTAAAGCAGCTACAGAAGGACTG...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR GCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTATTTCTCATTATCCCTaGATCATGATGAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLISHYP*IMMKML
Trigger: AAGCATCTTCATCATGATGCAGGGATAATGAGAAAT...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTGTAAGTATTGCTGCTaGAGATTCTTCAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQICKYCC*RFFNSF
Trigger: GAAGGAATTGAAGAATCTGCAGCAGCAATACTTACA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR GCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCATCTGTAAGTATTGCTaGTGCAGATTCTTCAATTCC +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIICKYC*CRFFNS
Trigger: GGAATTGAAGAATCTGCAGCAGCAATACTTACAGAT...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTTTCCAGTAGAATCTTaGACTCCTCTCTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIFPVES*TPLFLF
Trigger: AAACAGAAAGAGAGGAGTCCAAGATTCTACTGGAAA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTTTCCAGTAGAATCTTaGACTCCTCTCTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: QIIRFIETILLAWLKDIPFPVES*TPLFLF
Trigger: AAACAGAAAGAGAGGAGTCCAAGATTCTACTGGAAA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CCA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTTCACTGATTTCTGCTTaGAGCAAATCTATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: QDLITTVDLEQISQPTCLSLISA*SKSIWF
Trigger: AAACCAAATAGATTTGCTCCAAGCAGAAATCAGTGA...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CCA 90 bp TGCAAGGCTGTTACTTGTCTTGTTAGCTGGGATATAGATACTTTCAAACTCTCAAGAAGCTGCTTTTGTTaGCTGTCCTTTATTGTTATC +
Preference number: 4 (lower is better)
Translates to: CKAVTCLVSWDIDTFKLSRSCFC*LSFIVI
Trigger: GATAACAATAAAGGACAGCCAACAAAAGCAGCTTCT...TGAGAGTTTGAAAGTATCTATATCCCAGCTAACAAGACAAGTAACAGCCTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp GAACTTCAGATTATTAGGTTTATTGAAACCATCCTCTaGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTA +
Preference number: 4 (lower is better)
Translates to: ELQIIRFIETIL*AWLKDIPQYLL
Trigger: TAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTGAAGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
3UTR CAA 72 bp AAGGTCAAATTCATGCTGAAGTTCTTCCTTACTTATTaGTCCTGCTGGGCTCATCTCATCATAATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KVKFMLKFFLTY*SCWAHLIIILF
Trigger: AAACAAAATTATGATGAGATGAGCCCAGCAGGACAAATAAGTAAGGAAGAACTTCAGCATGAATTTGACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
3UTR CAA 72 bp CTTCCTCCTGAAGCATTTTTAGTTCACCATCCTTTGTaGATATCTGACTCAGTAAGGTATTTTTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: LPPEAFLVHHPL*ISDSVRYFSHF
Trigger: AAAATGAGAAAAATACCTTACTGAGTCAGATATCAACAAAGGATGGTGAACTAAAAATGCTTCAGGAGGAAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGCTCAGCAGCCACTCTTaGGTCTCGTTCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLLSSHS*VSFFFQ
Trigger: CTGGAAGAAGAACGAGACCAAAGAGTGGCTGCTGAG...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGAGCAGTCAGCTCCTGTaGCAGCAAGTCAACGACCTG +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSSQLL*QQVNDL
Trigger: CAGGTCGTTGACTTGCTGCAACAGGAGCTGACTGCT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGGACCAGAGCCTGGAATaGCTCTTCAGCTGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPDQSLE*LFSCQL
Trigger: AAGCTGGCAGCTGAAGAGCAATTCCAGGCTCTGGTC...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGCCTGCTGGTCTGTGCTaGGGAGTTTTCCGTCTATGG +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLPAGLC*GVFRLW
Trigger: CCATAGACGGAAAACTCCCAAGCACAGACCAGCAGG...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAAACATCTGCCAGAGACTaGGTGAGACGTTCAATGGTA +
Preference number: 5 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQTSARD*VRRSMV
Trigger: TACCATTGAACGTCTCACCAAGTCTCTGGCAGATGT...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTTCACTTTCCTTATTTaGCAGCTGGCTTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: RVNAGLASIQRHSGSFDNFTFLI*QLALQA
Trigger: AGCCTGCAAAGCCAGCTGCAAAATAAGGAAAGTGAA...GTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGCTCCTCGATGGTTTGTaGGAGGGTTTCCACATCTCT +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPLLDGL*EGFHIS
Trigger: AGAGATGTGGAAACCCTCCAACAAACCATCGAGGAG...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTGAATGACAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCGCTGTCTCCTTTAGTTaGGTAACTCTGGAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: VNDRVNAGLASIQRHSGSAVSFS*VTLESS
Trigger: AGAACTCTCCAGAGTTACCAAACTAAAGGAGACAGC...GGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTGTCATTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTGTCTGCTAGGACCCTaGCTGCTTCACTTTGAGTGT +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPCLLGP*LLHFEC
Trigger: ACACTCAAAGTGAAGCAGCAAGGGTCCTAGCAGACA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGTCTCCACCAAATCTCTaGCTAGCTCTGCCACTCTCT +
Preference number: 5 (lower is better)
Translates to: LSATGANDRSPGRVPFTVSPPNL*LALPLS
Trigger: AGAGAGTGGCAGAGCTAGCAAGAGATTTGGTGGAGA...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGAGATGCTGTTTCATGTaGTTGCAAGGGCAGTCTATT +
Preference number: 5 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLRCCFM*LQGQSI
Trigger: AATAGACTGCCCTTGCAACAACATGAAACAGCATCT...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGCAATCTACTGACTCTTaGCAGAAGCTCCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: SERRTRFHPTPLRVLRQLQSTDS*QKLLSV
Trigger: AACAGAAAGGAGCTTCTGCAAAGAGTCAGTAGATTG...CAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGACCAGAGCCTGGAATaGCTCTTCAGCTGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLDQSLE*LFSCQL
Trigger: AAGCTGGCAGCTGAAGAGCAATTCCAGGCTCTGGTC...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTTACTTACAGCAGGGTaGGCACTCTTCGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLLLTAG*ALFADG
Trigger: TCCATCAGCGAAGAGTGCCAACCCTGCTGTAAGTAA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGGCGGTGTTCAACTGCTaGAGCCAGATTTTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPAVFNC*SQIFFG
Trigger: ACCAAAGAAAATCTGGCTCAAGCAGTTGAACACCGC...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTTTTTCAACTTGAGATaGTCTGCTAGGACCCTTGCT +
Preference number: 5 (lower is better)
Translates to: AGLASIQRHSGSFDNCCLFFNLR*SARTLA
Trigger: AGCAAGGGTCCTAGCAGACAATCTCAAGTTGAAAAA...CAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGGACTCCCAAATCTGCTaGTCATGTTCAAGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPDSQIC*SCSSLE
Trigger: TTCCAGGCTTGAACATGACAAGCAGATTTGGGAGTC...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCCTCTGCAGCAGCCTCTaGGATGAGTTGGTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWALCSSL*DELVFF
Trigger: GAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGAG...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCCTCAGCAGCCACTCTTaGGTCTCGTTCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSLSSHS*VSFFFQ
Trigger: CTGGAAGAAGAACGAGACCAAAGAGTGGCTGCTGAG...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAAATTGAAACCATCCTCTaGGCTTGGCTGAAAGACATT +
Preference number: 5 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQIETIL*AWLKDI
Trigger: AATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAAT...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTCAAGAGGTCAGGAGTaGCAGTGTGGTGTTAGACCA +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWASRGQE*QCGVRP
Trigger: TGGTCTAACACCACACTGCAACTCCTGACCTCTTGA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGAACTCTTGTCATGCTaGGAAAGTTGCTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAELLSC*ESCSSD
Trigger: GTCAGAGGAGCAACTTTCCAAGCATGACAAGAGTTC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGCTCAGATGTTCTACTTaGATGTTCAGTGCTCGCCTG +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLLRCST*MFSARL
Trigger: CAGGCGAGCACTGAACATCAAAGTAGAACATCTGAG...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAAGTGAATGCACTGCTGTaGTTGTCAGCATTTTTCTTA +
Preference number: 5 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQVNALL*LSAFFL
Trigger: TAAGAAAAATGCTGACAACAACAGCAGTGCATTCAC...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CTGCTAGAAGTGGCACTCGGGTCCGTGAATGACAGAGTGAACGCAGGACTCGCTGTTGTCATGGGCAGTTaGGCTTTCATAATCAAGTCT +
Preference number: 5 (lower is better)
Translates to: LLEVALGSVNDRVNAGLAVVMGS*AFIIKS
Trigger: AGACTTGATTATGAAAGCCAAACTGCCCATGACAAC...AGCGAGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGTGCCACTTCTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGCTTCTCCTCGATGGTTaGTTGGAGGGTTTCCACATC +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWLLLDG*LEGFHI
Trigger: GATGTGGAAACCCTCCAACAAACCATCGAGGAGAAG...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTTCTTCCTTACTTATTaGTCCTGCTGGGCTCATCTC +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPFFLTY*SCWAHL
Trigger: GAGATGAGCCCAGCAGGACAAATAAGTAAGGAAGAA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTTCTGGATAATTGCTaGGTTTTCACTGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQLLDNC*VFTDFC
Trigger: GCAGAAATCAGTGAAAACCAAGCAATTATCCAGAAG...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGCTCTCATCATGCTCTTaGGCTTGCATTTCTAGCTGT +
Preference number: 5 (lower is better)
Translates to: LSATGANDRSPGRVPFTVLSSCS*ACISSC
Trigger: ACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGAG...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTCCTTCATGCTGGCATaGGAAGAAAGAAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSFMLA*EERSVS
Trigger: GGAAACACTTCTTTCTTCCAATGCCAGCATGAAGGA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGGCTGTCTCCTTTAGTTaGGTAACTCTGGAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPAVSFS*VTLESS
Trigger: AGAACTCTCCAGAGTTACCAAACTAAAGGAGACAGC...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGCGGTGTTCAACTGCTaGAGCCAGATTTTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAAVFNC*SQIFFG
Trigger: ACCAAAGAAAATCTGGCTCAAGCAGTTGAACACCGC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGACTCCCAAATCTGCTaGTCATGTTCAAGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWADSQIC*SCSSLE
Trigger: TTCCAGGCTTGAACATGACAAGCAGATTTGGGAGTC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAACTCAGTCAACTGGTCTTaGAGACTCTTAAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: RVNAGLASIQRHSGSFDNSVNWS*RLLSSD
Trigger: ATCAGAACTTAAGAGTCTCAAAGACCAGTTGACTGA...GTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTGGATTGCCTCTTCCTaGCCAGAAAGCAGGCTTATA +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAWIASS*PESRLI
Trigger: TATAAGCCTGCTTTCTGGCAAGGAAGAGGCAATCCA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTCCGCAGATCCTCATTaGCTTCCTCAGATTCCTTCA +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLSADPH*LPQIPS
Trigger: TGAAGGAATCTGAGGAAGCAAATGAGGATCTGCGGA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTAGACTGGCCATAGCCTaGGAAAAGGACTGCACTTGG +
Preference number: 5 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSRLAIA*EKDCTW
Trigger: CCAAGTGCAGTCCTTTTCCAAGGCTATGGCCAGTCT...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTAGAAGTGGCACTCGGGTCCGTGAATGACAGAGTGAACGCAGGACTCGCTCTGCCTGAGCTCTTCTaGCATAATCTGAAATGCTTT +
Preference number: 5 (lower is better)
Translates to: LLEVALGSVNDRVNAGLALPELF*HNLKCF
Trigger: AAAGCATTTCAGATTATGCAAGAAGAGCTCAGGCAG...AGCGAGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGTGCCACTTCTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCTGGGGATGCCTGTCTTaGGTATTGCACTTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSWGCLS*VLHFER
Trigger: CCTCTCAAAGTGCAATACCAAAGACAGGCATCCCCA...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTCTCAGCAGCCACTCTTaGGTCTCGTTCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSLSSHS*VSFFFQ
Trigger: CTGGAAGAAGAACGAGACCAAAGAGTGGCTGCTGAG...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAAGTCCTTCGACAACTGTaGCTTGTAAGATCTATTAAC +
Preference number: 5 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQVLRQL*LVRSIN
Trigger: GTTAATAGATCTTACAAGCAACAGTTGTCGAAGGAC...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482512.5
ENST00000491690.1
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTCCTCTGTAGAACTCTaGTCATGCTTGGAAAGTTGC +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLSSVEL*SCLESC
Trigger: GCAACTTTCCAAGCATGACAAGAGTTCTACAGAGGA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGAGTGCCACAGGAGCCAATGATAGGAGTCCGGGAAGAGTCCCATTCACTGTGCTTCTCCTGGAGCTGTaGCTTCATCATTACAAATTC +
Preference number: 5 (lower is better)
Translates to: LSATGANDRSPGRVPFTVLLLEL*LHHYKF
Trigger: GAATTTGTAATGATGAAGCAACAGCTCCAGGAGAAG...CACAGTGAATGGGACTCTTCCCGGACTCCTATCATTGGCTCCTGTGGCACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGCTTCTCCTGGAGCTGTaGCTTCATCATTACAAATTC +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPLLLEL*LHHYKF
Trigger: GAATTTGTAATGATGAAGCAACAGCTCCAGGAGAAG...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGAGCAGTCAGCTCCTGTaGCAGCAAGTCAACGACCTG +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKSSQLL*QQVNDL
Trigger: CAGGTCGTTGACTTGCTGCAACAGGAGCTGACTGCT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGGAAGAGCTCCTCTTGTaGGCAATATCAACAATGCTG +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLEELLL*AISTML
Trigger: CAGCATTGTTGATATTGCCAACAAGAGGAGCTCTTC...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTTCGACAATATCACCATCCTGCTTaGTTGATTTCAATTCTACTC +
Preference number: 5 (lower is better)
Translates to: QSERRTRFHPTPLRVLRQYHHPA*LISILL
Trigger: GAGTAGAATTGAAATCAACAAAGCAGGATGGTGATA...TTGTCGAAGGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CTGCTAGAAGTGGCACTCGGGTCCGTGAATGACAGAGTGAACGCAGGACTCGCTGTTCTTCCACTTTACTaGAGATATGCCTTACACGTT +
Preference number: 5 (lower is better)
Translates to: LLEVALGSVNDRVNAGLAVLPLY*RYALHV
Trigger: AACGTGTAAGGCATATCTCAAGTAAAGTGGAAGAAC...AGCGAGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGTGCCACTTCTAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTCCTGCTGGTCTGTGCTaGGGAGTTTTCCGTCTATGG +
Preference number: 5 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSPAGLC*GVFRLW
Trigger: CCATAGACGGAAAACTCCCAAGCACAGACCAGCAGG...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTGAATGACAGAGTGAACGCAGGACTCGCTTCCATCCAACGCCACTCCGGGTCCTGCTGTTCTGTGGCTTaGAATAAAGGTTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: VNDRVNAGLASIQRHSGSCCSVA*NKGSSK
Trigger: TTTAGAAGAACCTTTATTCAAAGCCACAGAACAGCA...GGACCCGGAGTGGCGTTGGATGGAAGCGAGTCCTGCGTTCACTCTGTCATTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTCTTTTTGTAGCTCCTaGTGTTTCTCTTGCCACTCA +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSFCSS*CFSCHS
Trigger: TGAGTGGCAAGAGAAACACAAGGAGCTACAAAAAGA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGCTGTCTCCTTCTTGTTaGCCTCTGTGCTTCTTAACT +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLLSPSC*PLCFLT
Trigger: AGTTAAGAAGCACAGAGGCAAACAAGAAGGAGACAG...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTCCTTCATGCTGGCATaGGAAGAAAGAAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLSFMLA*EERSVS
Trigger: GGAAACACTTCTTTCTTCCAATGCCAGCATGAAGGA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTCCTTCATGCTGGCATaGGAAGAAAGAAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWASFMLA*EERSVS
Trigger: GGAAACACTTCTTTCTTCCAATGCCAGCATGAAGGA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGACCTCTGTCTGGGCCTaGGACTCCCAAATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQTSVWA*DSQICL
Trigger: CAAGCAGATTTGGGAGTCCAAGGCCCAGACAGAGGT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTCTCTGCAGCAGCCTCTaGGATGAGTTGGTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSLCSSL*DELVFF
Trigger: GAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGAG...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGTCCGCAGATCCTCATTaGCTTCCTCAGATTCCTTCA +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSADPH*LPQIPS
Trigger: TGAAGGAATCTGAGGAAGCAAATGAGGATCTGCGGA...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTAGAAGTGGCACTCGGGTCCGTGAATGACAGAGTGAACGCAGGACTCGCTTTCTGCAATTCTCTTTaGAGAGGAGGAAAACAAAGC +
Preference number: 5 (lower is better)
Translates to: LLEVALGSVNDRVNAGLAFCNSL*RGGKQS
Trigger: GCTTTGTTTTCCTCCTCTCAAAAGAGAATTGCAGAA...AGCGAGTCCTGCGTTCACTCTGTCATTCACGGACCCGAGTGCCACTTCTAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTGGGGATGCCTGTCTTaGGTATTGCACTTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSWGCLS*VLHFER
Trigger: CCTCTCAAAGTGCAATACCAAAGACAGGCATCCCCA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGTCCTTTAAGCTGTCATaGAGCTGGGTCCTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSFKLS*SWVLRS
Trigger: ACTTCTCAGGACCCAGCTCAATGACAGCTTAAAGGA...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGCTCAGCAGCCACTCTTaGGTCTCGTTCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: RLGETFNGTSGQRQFLLELSSHS*VSFFFQ
Trigger: CTGGAAGAAGAACGAGACCAAAGAGTGGCTGCTGAG...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCAACCATCCTCTTGGCTaGGCTGAAAGACATTCCTCA +
Preference number: 5 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSNHPLG*AERHSS
Trigger: TGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGATCAGTCAGCCCACTaGTCTTCTCTCTTCTTTAGG +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWDQSAH*SSLFFR
Trigger: CCTAAAGAAGAGAGAAGACAAGTGGGCTGACTGATC...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGATCTTTCTGCTGCAGTaGAACATCCTTCTGTCTAAT +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPIFLLQ*NILLSN
Trigger: ATTAGACAGAAGGATGTTCAACTGCAGCAGAAAGAT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGTCCTCTGTAGAACTCTaGTCATGCTTGGAAAGTTGC +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSSVEL*SCLESC
Trigger: GCAACTTTCCAAGCATGACAAGAGTTCTACAGAGGA...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAAGCAGTCAGCTCCTGTaGCAGCAAGTCAACGACCTG +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRSSQLL*QQVNDL
Trigger: CAGGTCGTTGACTTGCTGCAACAGGAGCTGACTGCT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAAGCAGTCAGCTCCTGTaGCAGCAAGTCAACGACCTG +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPSSQLL*QQVNDL
Trigger: CAGGTCGTTGACTTGCTGCAACAGGAGCTGACTGCT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGAGATGCTGTTTCATGTaGTTGCAAGGGCAGTCTATT +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLRCCFM*LQGQSI
Trigger: AATAGACTGCCCTTGCAACAACATGAAACAGCATCT...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGGACTGCTCTCTTCATTaGGCATTAAGGGAAAATCTT +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPDCSLH*ALRENL
Trigger: AAGATTTTCCCTTAATGCCAAATGAAGAGAGCAGTC...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCGATTTCTGTCACTTGTaGATCCTTCTCCTCGATGGT +
Preference number: 5 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSDFCHL*ILLLDG
Trigger: ACCATCGAGGAGAAGGATCAACAAGTGACAGAAATC...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCTGATTTCTGTCACTaGTTGATCCTTCTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWADFCH*LILLLD
Trigger: ATCGAGGAGAAGGATCAACAAGTGACAGAAATCAGC...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGGACCAGAGCCTGGAATaGCTCTTCAGCTGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKDQSLE*LFSCQL
Trigger: AAGCTGGCAGCTGAAGAGCAATTCCAGGCTCTGGTC...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGCCTGCTGGTCTGTGCTaGGGAGTTTTCCGTCTATGG +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKPAGLC*GVFRLW
Trigger: CCATAGACGGAAAACTCCCAAGCACAGACCAGCAGG...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGACATCTGCCAGAGACTaGGTGAGACGTTCAATGGTA +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQETSARD*VRRSMV
Trigger: TACCATTGAACGTCTCACCAAGTCTCTGGCAGATGT...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTAAGATCTATTTTACTTACAGCAGGGTaGGCACTCTTCGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: FHPTPLRVLRQLLLVRSILLTAG*ALFADG
Trigger: TCCATCAGCGAAGAGTGCCAACCCTGCTGTAAGTAA...AATAGATCTTACAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGGTTCACCATCCTTTGTaGATATCTGACTCAGTAAGG +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLVHHPL*ISDSVR
Trigger: CCTTACTGAGTCAGATATCAACAAAGGATGGTGAAC...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGACCTCTGTCTGGGCCTaGGACTCCCAAATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKTSVWA*DSQICL
Trigger: CAAGCAGATTTGGGAGTCCAAGGCCCAGACAGAGGT...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAACCTCTGTCTGGGCCTaGGACTCCCAAATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPTSVWA*DSQICL
Trigger: CAAGCAGATTTGGGAGTCCAAGGCCCAGACAGAGGT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTCAGTCAACTGGTCTTaGAGACTCTTAAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSVNWS*RLLSSD
Trigger: ATCAGAACTTAAGAGTCTCAAAGACCAGTTGACTGA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTGGATTGCCTCTTCCTaGCCAGAAAGCAGGCTTATA +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEWIASS*PESRLI
Trigger: TATAAGCCTGCTTTCTGGCAAGGAAGAGGCAATCCA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCGCGGTCTCGATCATTTaGGAGAGAAGACATGGATTT +
Preference number: 5 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSAVSII*ERRHGF
Trigger: AAATCCATGTCTTCTCTCCAAAATGATCGAGACCGC...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCGCTCTTCCAGCTGTaGATAGTCACCCACTATGCG +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQSLFQL*IVTHYA
Trigger: CGCATAGTGGGTGACTATCAACAGCTGGAAGAGCGA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTCGCTCTTCCAGCTGTaGATAGTCACCCACTATGCG +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKSLFQL*IVTHYA
Trigger: CGCATAGTGGGTGACTATCAACAGCTGGAAGAGCGA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGAGCCTCTTGGATGAGTaGGTCTTTTTCCAAGATTAT +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPSLLDE*VFFQDY
Trigger: ATAATCTTGGAAAAAGACCAACTCATCCAAGAGGCT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGTTGGCTGTCCTTTATaGTTATCACTTGGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAVGCPL*LSLGSG
Trigger: ACCTGAACCAAGTGATAACAATAAAGGACAGCCAAC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGAGACTGGCCATAGCCTaGGAAAAGGACTGCACTTGG +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKRLAIA*EKDCTW
Trigger: CCAAGTGCAGTCCTTTTCCAAGGCTATGGCCAGTCT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGCTGCCTGAGCTCTTCTaGCATAATCTGAAATGCTTT +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLLPELF*HNLKCF
Trigger: AAAGCATTTCAGATTATGCAAGAAGAGCTCAGGCAG...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTGCCTGTCTTTGGTATaGCACTTTGAGAGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSCLSLV*HFERLS
Trigger: ACTCAGCCTCTCAAAGTGCAATACCAAAGACAGGCA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGAACCATCCTCTTGGCTaGGCTGAAAGACATTCCTCA +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQENHPLG*AERHSS
Trigger: TGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCATTGAAACCATCCTCTaGGCTTGGCTGAAAGACATT +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAIETIL*AWLKDI
Trigger: AATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAAT...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGATCAGTCAGCCCACTaGTCTTCTCTCTTCTTTAGG +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLDQSAH*SSLFFR
Trigger: CCTAAAGAAGAGAGAAGACAAGTGGGCTGACTGATC...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGCAATTTCTGTGCAGCTaGCTCTGCCTGTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQQFLCS*LCLCLA
Trigger: AGCCAGACACAGGCAGAGCAAGCTGCACAGAAATTG...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614479.4
CDS TCA 90 bp TACACTACACCCAGTCACCATACCTTGGAAAGTTGCTCCTCTGACTaGGGTTCTGTAGGCAGAACAGTCCCTCCTTGTGCTTTCATTTCT +
Preference number: 5 (lower is better)
Translates to: YTTPSHHTLESCSSD*GSVGRTVPPCAFIS
Trigger: AGAAATGAAAGCACAAGGAGGGACTGTTCTGCCTACAGAACCTCAGTCAGAGGAGCAACTTTCCAAGGTATGGTGACTGGGTGTAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472829.1
CDS-3UTR CAA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCAGATGCTGTTTCATGTaGTTGCAAGGGCAGTCTATT +
Preference number: 5 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSRCCFM*LQGQSI
Trigger: AATAGACTGCCCTTGCAACAACATGAAACAGCATCT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCGACTGCTCTCTTCATTaGGCATTAAGGGAAAATCTT +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWADCSLH*ALRENL
Trigger: AAGATTTTCCCTTAATGCCAAATGAAGAGAGCAGTC...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTGTTCAGTGAGCAGGTaGTCATGGGCAGTTTGGCTT +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQCSVSR*SWAVWL
Trigger: AAGCCAAACTGCCCATGACAACCTGCTCACTGAACA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCGCTGATTTCTGTCACTaGTTGATCCTTCTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFADFCH*LILLLD
Trigger: ATCGAGGAGAAGGATCAACAAGTGACAGAAATCAGC...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTTCTTCCTTACTTATTaGTCCTGCTGGGCTCATCTC +
Preference number: 5 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSFFLTY*SCWAHL
Trigger: GAGATGAGCCCAGCAGGACAAATAAGTAAGGAAGAA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GAGCTTCAGAAAAGCTTTGCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTTCTTCCTTACTTATTaGTCCTGCTGGGCTCATCTC +
Preference number: 5 (lower is better)
Translates to: ELQKSFAAVPLVPQGHSFFFLTY*SCWAHL
Trigger: GAGATGAGCCCAGCAGGACAAATAAGTAAGGAAGAA...GAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGCAAAGCTTTTCTGAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTTCTTCCTTACTTATTaGTCCTGCTGGGCTCATCTC +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLFFLTY*SCWAHL
Trigger: GAGATGAGCCCAGCAGGACAAATAAGTAAGGAAGAA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGTTCACTGATTTCTGCTaGGAGCAAATCTATTTGGTT +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPFTDFC*EQIYLV
Trigger: AACCAAATAGATTTGCTCCAAGCAGAAATCAGTGAA...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTTTTTAAGAATTGCCTaGCGGGAGGTTAAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSFLRIA*REVKAS
Trigger: GGAAGCCTTAACCTCCCGCAAGGCAATTCTTAAAAA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCCTCATCAAACTGTTCTaGCAAGCGATTATAGTCATC +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWALIKLF*QAIIVI
Trigger: GATGACTATAATCGCTTGCAAGAACAGTTTGATGAG...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTCCTGCTGGTCTGTGCTaGGGAGTTTTCCGTCTATGG +
Preference number: 5 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVPAGLC*GVFRLW
Trigger: CCATAGACGGAAAACTCCCAAGCACAGACCAGCAGG...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGTCTTTTTGTAGCTCCTaGTGTTTCTCTTGCCACTCA +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSFCSS*CFSCHS
Trigger: TGAGTGGCAAGAGAAACACAAGGAGCTACAAAAAGA...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTCAGTCAACTGGTCTTaGAGACTCTTAAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWASVNWS*RLLSSD
Trigger: ATCAGAACTTAAGAGTCTCAAAGACCAGTTGACTGA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTTGAATATCAGCCTCTaGCTGCCTTATGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQELNISL*LPYDPF
Trigger: GAAGGGATCATAAGGCAGCAAGAGGCTGATATTCAA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CCTGCAGCTCCAACCTGTCCTCGTATCCACCTCTGTTTTTGCAGGCACTTTCCGAAGATCAGTCTCCAGTaGTTCATAACTGAACTTAGA +
Preference number: 5 (lower is better)
Translates to: PAAPTCPRIHLCFCRHFPKISLQ*FITELR
Trigger: TCTAAGTTCAGTTATGAACAACTGGAGACTGATCTT...CGGAAAGTGCCTGCAAAAACAGAGGTGGATACGAGGACAGGTTGGAGCTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGTTCAGCAATAGCTACTaGGATTGCCTCTTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: RLGETFNGTSGQRQFLLEFSNSY*DCLFLA
Trigger: GGCAAGGAAGAGGCAATCCAAGTAGCTATTGCTGAA...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCGGTCTCGATCATTTaGGAGAGAAGACATGGATTT +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLAVSII*ERRHGF
Trigger: AAATCCATGTCTTCTCTCCAAAATGATCGAGACCGC...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGTCGCTCTTCCAGCTGTaGATAGTCACCCACTATGCG +
Preference number: 5 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLSLFQL*IVTHYA
Trigger: CGCATAGTGGGTGACTATCAACAGCTGGAAGAGCGA...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCAGTTCTGCATCTAGCTaGGCATTCTCAGAATTGAGA +
Preference number: 5 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSSSASS*AFSELR
Trigger: TCTCAATTCTGAGAATGCCAAGCTAGATGCAGAACT...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTAAGATCTATTTCCGCAGATCCTCATTaGCTTCCTCAGATTCCTTCA +
Preference number: 5 (lower is better)
Translates to: FHPTPLRVLRQLLLVRSISADPH*LPQIPS
Trigger: TGAAGGAATCTGAGGAAGCAAATGAGGATCTGCGGA...AATAGATCTTACAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGTTCTGCAATTCTCTTTaGAGAGGAGGAAAACAAAGC +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLFCNSL*RGGKQS
Trigger: GCTTTGTTTTCCTCCTCTCAAAAGAGAATTGCAGAA...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTCTCCACCAAATCTCTaGCTAGCTCTGCCACTCTCT +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKSPPNL*LALPLS
Trigger: AGAGAGTGGCAGAGCTAGCAAGAGATTTGGTGGAGA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGCTGCCTGAGCTCTTCTaGCATAATCTGAAATGCTTT +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWLPELF*HNLKCF
Trigger: AAAGCATTTCAGATTATGCAAGAAGAGCTCAGGCAG...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GCTGCGGTTCCCTTAGTTCCTCAGGGTCACTCTTTCTGTGAACTCCATTCTTTTTGCCTGTCTTTGGTATaGCACTTTGAGAGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: AAVPLVPQGHSFCELHSFCLSLV*HFERLS
Trigger: ACTCAGCCTCTCAAAGTGCAATACCAAAGACAGGCA...AAAAGAATGGAGTTCACAGAAAGAGTGACCCTGAGGAACTAAGGGAACCGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGCAATTATATCTGAAATaGGCAGGGAAGAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLQLYLK*AGKKML
Trigger: CAGCATCTTCTTCCCTGCCAATTTCAGATATAATTG...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTTCTCCCTGCCCTTaGGTGAAAGGAAAGACTTGG +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKTSPCP*VKGKTW
Trigger: CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS TCA 90 bp AATATACACTACACCCAGTCACCATACCTTGGAAAGTTGCTCCTCTaGCTGAGGTTCTGTAGGCAGAACAGTCCCTCCTTGTGCTTTCAT +
Preference number: 5 (lower is better)
Translates to: NIHYTQSPYLGKLLL*LRFCRQNSPSLCFH
Trigger: ATGAAAGCACAAGGAGGGACTGTTCTGCCTACAGAACCTCAGTCAGAGGAGCAACTTTCCAAGGTATGGTGACTGGGTGTAGTGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472829.1
CDS-3UTR CAA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCCATGCAAAACAACATTaGCTAATCCTGATAATCGGC +
Preference number: 5 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSHAKQH*LILIIG
Trigger: GCCGATTATCAGGATTAGCAAATGTTGTTTTGCATG...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGGAACTCTTGTCATGCTaGGAAAGTTGCTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQELLSC*ESCSSD
Trigger: GTCAGAGGAGCAACTTTCCAAGCATGACAAGAGTTC...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGTCCTCTGTAGAACTCTaGTCATGCTTGGAAAGTTGC +
Preference number: 5 (lower is better)
Translates to: RLGETFNGTSGQRQFLLESSVEL*SCLESC
Trigger: GCAACTTTCCAAGCATGACAAGAGTTCTACAGAGGA...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGCTTCTCCTGGAGCTGTaGCTTCATCATTACAAATTC +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLLLLEL*LHHYKF
Trigger: GAATTTGTAATGATGAAGCAACAGCTCCAGGAGAAG...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGGAAGAGCTCCTCTTGTaGGCAATATCAACAATGCTG +
Preference number: 5 (lower is better)
Translates to: RLGETFNGTSGQRQFLLEEELLL*AISTML
Trigger: CAGCATTGTTGATATTGCCAACAAGAGGAGCTCTTC...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCACCATCCTGCTTTGTaGATTTCAATTCTACTCCAG +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEHHPAL*ISILLQ
Trigger: CTGGAGTAGAATTGAAATCAACAAAGCAGGATGGTG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGGTTGTCATGGGCAGTTaGGCTTTCATAATCAAGTCT +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEVVMGS*AFIIKS
Trigger: AGACTTGATTATGAAAGCCAAACTGCCCATGACAAC...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCTGTTCAGTGAGCAGGTaGTCATGGGCAGTTTGGCTT +
Preference number: 5 (lower is better)
Translates to: ERRASLSLFKSPCSFNCACSVSR*SWAVWL
Trigger: AAGCCAAACTGCCCATGACAACCTGCTCACTGAACA...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGATTTTGCAGCTGGCTTaGCAGGCTTCTTATCAGGGT +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKILQLA*QASYQG
Trigger: ACCCTGATAAGAAGCCTGCAAAGCCAGCTGCAAAAT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGTTCTTCCACTTTACTaGAGATATGCCTTACACGTT +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWVLPLY*RYALHV
Trigger: AACGTGTAAGGCATATCTCAAGTAAAGTGGAAGAAC...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGCTCCTCGATGGTTTGTaGGAGGGTTTCCACATCTCT +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKLLDGL*EGFHIS
Trigger: AGAGATGTGGAAACCCTCCAACAAACCATCGAGGAG...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGCTTCTCCTCGATGGTTaGTTGGAGGGTTTCCACATC +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKLLLDG*LEGFHI
Trigger: GATGTGGAAACCCTCCAACAAACCATCGAGGAGAAG...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTCTTCTCCTCGATGGTTaGTTGGAGGGTTTCCACATC +
Preference number: 5 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSLLLDG*LEGFHI
Trigger: GATGTGGAAACCCTCCAACAAACCATCGAGGAGAAG...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTCAATCTACTGACTCTTaGCAGAAGCTCCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSQSTDS*QKLLSV
Trigger: AACAGAAAGGAGCTTCTGCAAAGAGTCAGTAGATTG...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTGACCAGAGCCTGGAATaGCTCTTCAGCTGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVDQSLE*LFSCQL
Trigger: AAGCTGGCAGCTGAAGAGCAATTCCAGGCTCTGGTC...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGGCCTTCACTGATTTCTGCTaGGAGCAAATCTATTTGGTT +
Preference number: 5 (lower is better)
Translates to: LLSIDTSPCPLVKGKTWAFTDFC*EQIYLV
Trigger: AACCAAATAGATTTGCTCCAAGCAGAAATCAGTGAA...GGCCCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGTTCTTTCTCACTAAGTaGTCCAGAAAGGTAGCTAAC +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWFFLTK*SRKVAN
Trigger: GTTAGCTACCTTTCTGGACAACTTAGTGAGAAAGAA...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGGGAAATAAGGGCAGCTaGCAGTTTCCTTTGTATTTG +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEGNKGS*QFPLYL
Trigger: CAAATACAAAGGAAACTGCAAGCTGCCCTTATTTCC...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTACTTACAGCAGGGTaGGCACTCTTCGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRLLTAG*ALFADG
Trigger: TCCATCAGCGAAGAGTGCCAACCCTGCTGTAAGTAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTTACTTACAGCAGGGTaGGCACTCTTCGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKLLTAG*ALFADG
Trigger: TCCATCAGCGAAGAGTGCCAACCCTGCTGTAAGTAA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGAGCACTAATTTTCTCTaGATACCTGATGCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSTNFL*IPDAVL
Trigger: AAGGACTGCATCAGGTATCAAGAGAAAATTAGTGCT...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTGTCTGCTAGGACCCTaGCTGCTTCACTTTGAGTGT +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKCLLGP*LLHFEC
Trigger: ACACTCAAAGTGAAGCAGCAAGGGTCCTAGCAGACA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTTTTTCAACTTGAGATaGTCTGCTAGGACCCTTGCT +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLFFNLR*SARTLA
Trigger: AGCAAGGGTCCTAGCAGACAATCTCAAGTTGAAAAA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTGGCCCCTGAGCACTGTCTCAGGGTCCACATTCCAGGAATATTCAGATATTCCTCAGTCAACTGGTCTTaGAGACTCTTAAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: VAPEHCLRVHIPGIFRYSSVNWS*RLLSSD
Trigger: ATCAGAACTTAAGAGTCTCAAAGACCAGTTGACTGA...GGAATATCTGAATATTCCTGGAATGTGGACCCTGAGACAGTGCTCAGGGGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTGGATTGCCTCTTCCTaGCCAGAAAGCAGGCTTATA +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKWIASS*PESRLI
Trigger: TATAAGCCTGCTTTCTGGCAAGGAAGAGGCAATCCA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATCGCTCTTCCAGCTGTaGATAGTCACCCACTATGCG +
Preference number: 5 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRSLFQL*IVTHYA
Trigger: CGCATAGTGGGTGACTATCAACAGCTGGAAGAGCGA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGAGCCTCTTGGATGAGTaGGTCTTTTTCCAAGATTAT +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWSLLDE*VFFQDY
Trigger: ATAATCTTGGAAAAAGACCAACTCATCCAAGAGGCT...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTCTCTGCAGCAGCCTCTaGGATGAGTTGGTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSLCSSL*DELVFF
Trigger: GAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGAG...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATCTCCACCAAATCTCTaGCTAGCTCTGCCACTCTCT +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPSPPNL*LALPLS
Trigger: AGAGAGTGGCAGAGCTAGCAAGAGATTTGGTGGAGA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGCTGATGATCTCTACTATTTaGCAAGGAACTCATAGACCT +
Preference number: 5 (lower is better)
Translates to: LQEVRSCSVVLDQSDSWLMISTI*QGTHRP
Trigger: AGGTCTATGAGTTCCTTGCAAAATAGTAGAGATCAT...CAGCCAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGAGCAATTGCTCATCTTaGGATAGGAGCTGTTGGTTA +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLSNCSS*DRSCWL
Trigger: TAACCAACAGCTCCTATCCAAAGATGAGCAATTGCT...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAAGACTGGCCATAGCCTaGGAAAAGGACTGCACTTGG +
Preference number: 5 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRRLAIA*EKDCTW
Trigger: CCAAGTGCAGTCCTTTTCCAAGGCTATGGCCAGTCT...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTGCCTGTCTTTGGTATaGCACTTTGAGAGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQCLSLV*HFERLS
Trigger: ACTCAGCCTCTCAAAGTGCAATACCAAAGACAGGCA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGACTTTCCGTGAAGAGTaGGAGAGAAGACCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQETFREE*ERRPVN
Trigger: ATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGT...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCTCACCCTCCATCTGTTTCATTTCTTTCTGGTCAAGGACCTCATGATCTGAACCATCCTCTTGGCTaGGCTGAAAGACATTCCTCA +
Preference number: 5 (lower is better)
Translates to: FPHPPSVSFLSGQGPHDLNHPLG*AERHSS
Trigger: TGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT...CAGATCATGAGGTCCTTGACCAGAAAGAAATGAAACAGATGGAGGGTGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAACTTCTCCCTGCCCTTaGGTGAAAGGAAAGACTTGG +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPTSPCP*VKGKTW
Trigger: CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATCAAGAGGTCAGGAGTaGCAGTGTGGTGTTAGACCA +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPSRGQE*QCGVRP
Trigger: TGGTCTAACACCACACTGCAACTCCTGACCTCTTGA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGGATCAGTCAGCCCACTaGTCTTCTCTCTTCTTTAGG +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQDQSAH*SSLFFR
Trigger: CCTAAAGAAGAGAGAAGACAAGTGGGCTGACTGATC...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAGAACTCTTGTCATGCTaGGAAAGTTGCTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPELLSC*ESCSSD
Trigger: GTCAGAGGAGCAACTTTCCAAGCATGACAAGAGTTC...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCCTCTGTAGAACTCTaGTCATGCTTGGAAAGTTGC +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQSSVEL*SCLESC
Trigger: GCAACTTTCCAAGCATGACAAGAGTTCTACAGAGGA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGGACTGCTCTCTTCATTaGGCATTAAGGGAAAATCTT +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLDCSLH*ALRENL
Trigger: AAGATTTTCCCTTAATGCCAAATGAAGAGAGCAGTC...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGACTCAGATGTTCTACTTaGATGTTCAGTGCTCGCCTG +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRLRCST*MFSARL
Trigger: CAGGCGAGCACTGAACATCAAAGTAGAACATCTGAG...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGCTCAGATGTTCTACTTaGATGTTCAGTGCTCGCCTG +
Preference number: 5 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLLRCST*MFSARL
Trigger: CAGGCGAGCACTGAACATCAAAGTAGAACATCTGAG...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGGTGAATGCACTGCTGTaGTTGTCAGCATTTTTCTTA +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEVNALL*LSAFFL
Trigger: TAAGAAAAATGCTGACAACAACAGCAGTGCATTCAC...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCATTTTGCAGCTGGCTTaGCAGGCTTCTTATCAGGGT +
Preference number: 5 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFILQLA*QASYQG
Trigger: ACCCTGATAAGAAGCCTGCAAAGCCAGCTGCAAAAT...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTCTCCTCGATGGTTTGTaGGAGGGTTTCCACATCTCT +
Preference number: 5 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVLLDGL*EGFHIS
Trigger: AGAGATGTGGAAACCCTCCAACAAACCATCGAGGAG...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTCTTCTCCTCGATGGTTaGTTGGAGGGTTTCCACATC +
Preference number: 5 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVLLLDG*LEGFHI
Trigger: GATGTGGAAACCCTCCAACAAACCATCGAGGAGAAG...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGGATTTCTGTCACTTGTaGATCCTTCTCCTCGATGGT +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKDFCHL*ILLLDG
Trigger: ACCATCGAGGAGAAGGATCAACAAGTGACAGAAATC...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGGCTGATTTCTGTCACTaGTTGATCCTTCTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQADFCH*LILLLD
Trigger: ATCGAGGAGAAGGATCAACAAGTGACAGAAATCAGC...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGCTTCTGGATAATTGCTaGGTTTTCACTGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQELLDNC*VFTDFC
Trigger: GCAGAAATCAGTGAAAACCAAGCAATTATCCAGAAG...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTCTTCTGGATAATTGCTaGGTTTTCACTGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSLLDNC*VFTDFC
Trigger: GCAGAAATCAGTGAAAACCAAGCAATTATCCAGAAG...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTTTTTAAGAATTGCCTaGCGGGAGGTTAAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQFLRIA*REVKAS
Trigger: GGAAGCCTTAACCTCCCGCAAGGCAATTCTTAAAAA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTTCTTTCTCACTAAGTaGTCCAGAAAGGTAGCTAAC +
Preference number: 5 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSFFLTK*SRKVAN
Trigger: GTTAGCTACCTTTCTGGACAACTTAGTGAGAAAGAA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGCTCTCATCATGCTCTTaGGCTTGCATTTCTAGCTGT +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQLSSCS*ACISSC
Trigger: ACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGAG...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGATTTTGAGCAGAAACTaGGCTTTCCACATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQILSRN*AFHICQ
Trigger: CTGGCAGATGTGGAAAGCCAAGTTTCTGCTCAAAAT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTCTGTCTCCTTCTTGTTaGCCTCTGTGCTTCTTAACT +
Preference number: 5 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSLSPSC*PLCFLT
Trigger: AGTTAAGAAGCACAGAGGCAAACAAGAAGGAGACAG...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCCTTCATGCTGGCATaGGAAGAAAGAAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQSFMLA*EERSVS
Trigger: GGAAACACTTCTTTCTTCCAATGCCAGCATGAAGGA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTTCAGTGACATTCGTTaGGTTATCATGTTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLFSDIR*VIMFLG
Trigger: ACCGAGAAACATGATAACCAAACGAATGTCACTGAA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGGCTGTCTCCTTTAGTTaGGTAACTCTGGAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQAVSFS*VTLESS
Trigger: AGAACTCTCCAGAGTTACCAAACTAAAGGAGACAGC...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCGCGGTGTTCAACTGCTaGAGCCAGATTTTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIAVFNC*SQIFFG
Trigger: ACCAAAGAAAATCTGGCTCAAGCAGTTGAACACCGC...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGCCTGAATCTCTCCAATaGTCTCTTCCAAGTGGACTT +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQPESLQ*SLPSGL
Trigger: AAGTCCACTTGGAAGAGACAATTGGAGAGATTCAGG...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCACCTCTGTCTGGGCCTaGGACTCCCAAATCTGCTTG +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQITSVWA*DSQICL
Trigger: CAAGCAGATTTGGGAGTCCAAGGCCCAGACAGAGGT...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTTCAGCAATAGCTACTaGGATTGCCTCTTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIFSNSY*DCLFLA
Trigger: GGCAAGGAAGAGGCAATCCAAGTAGCTATTGCTGAA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp ACCCTGCTGTCCATAGACACTTCTCCCTGCCCTTTGGTGAAAGGAAAGACTTGGATCCAACTGTGCCTTTaGCTGAATGTTTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: TLLSIDTSPCPLVKGKTWIQLCL*LNVFLF
Trigger: AAAAAGGAAAACATTCAGCAAAAGGCACAGTTGGAT...CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGTGTCTATGGACAGCAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCATCCAACGCCACTCCGGGTCCTTCGACAACTGTTGCTTGTAAGATCTATTGTTGGCTGTCCTTTATaGTTATCACTTGGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: FHPTPLRVLRQLLLVRSIVGCPL*LSLGSG
Trigger: ACCTGAACCAAGTGATAACAATAAAGGACAGCCAAC...AATAGATCTTACAAGCAACAGTTGTCGAAGGACCCGGAGTGGCGTTGGATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTTCAAGAAGCTGCTTTaGTTGGCTGTCCTTTATTGT +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEFKKLL*LAVLYC
Trigger: ACAATAAAGGACAGCCAACAAAAGCAGCTTCTTGAA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTCCGCAGATCCTCATTaGCTTCCTCAGATTCCTTCA +
Preference number: 5 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKSADPH*LPQIPS
Trigger: TGAAGGAATCTGAGGAAGCAAATGAGGATCTGCGGA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATCTCCACCAAATCTCTaGCTAGCTCTGCCACTCTCT +
Preference number: 5 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRSPPNL*LALPLS
Trigger: AGAGAGTGGCAGAGCTAGCAAGAGATTTGGTGGAGA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTGCTTTTGTCTTATCTaGATACTCCTGAAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLCFCLI*ILLKLS
Trigger: GCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATGGGGATGCCTGTCTTaGGTATTGCACTTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRWGCLS*VLHFER
Trigger: CCTCTCAAAGTGCAATACCAAAGACAGGCATCCCCA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTCCTTTAAGCTGTCATaGAGCTGGGTCCTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVISFKLS*SWVLRS
Trigger: ACTTCTCAGGACCCAGCTCAATGACAGCTTAAAGGA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GGAGCTCCTGGAGCAACATCTATATTTAGTGGCCCCTACATAAAACTCTTGTCTTCCTTTAAGCTGTCATaGAGCTGGGTCCTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: GAPGATSIFSGPYIKLLSSFKLS*SWVLRS
Trigger: ACTTCTCAGGACCCAGCTCAATGACAGCTTAAAGGA...AGACAAGAGTTTTATGTAGGGGCCACTAAATATAGATGTTGCTCCAGGAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491690.1
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATCCTTTAAGCTGTCATaGAGCTGGGTCCTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPSFKLS*SWVLRS
Trigger: ACTTCTCAGGACCCAGCTCAATGACAGCTTAAAGGA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCCTCAGCAGCCACTCTTaGGTCTCGTTCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLLSSHS*VSFFFQ
Trigger: CTGGAAGAAGAACGAGACCAAAGAGTGGCTGCTGAG...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGGCAGAAGAGCTCCTCTaGTTGGCAATATCAACAATG +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKAEELL*LAISTM
Trigger: CATTGTTGATATTGCCAACAAGAGGAGCTCTTCTGC...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCGCAGAAGAGCTCCTCTaGTTGGCAATATCAACAATG +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIAEELL*LAISTM
Trigger: CATTGTTGATATTGCCAACAAGAGGAGCTCTTCTGC...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGCACCATCCTGCTTTGTaGATTTCAATTCTACTCCAG +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKHHPAL*ISILLQ
Trigger: CTGGAGTAGAATTGAAATCAACAAAGCAGGATGGTG...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTTCACATCTTTAGATTaGGCTTCTATGCTGAGACTA +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLFTSLD*ASMLRL
Trigger: TAGTCTCAGCATAGAAGCCAAATCTAAAGATGTGAA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTCACTTTCCTTATTTaGCAGCTGGCTTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRFTFLI*QLALQA
Trigger: AGCCTGCAAAGCCAGCTGCAAAATAAGGAAAGTGAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTTCACTTTCCTTATTTaGCAGCTGGCTTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIFTFLI*QLALQA
Trigger: AGCCTGCAAAGCCAGCTGCAAAATAAGGAAAGTGAA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCCTCCTCGATGGTTTGTaGGAGGGTTTCCACATCTCT +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLLLDGL*EGFHIS
Trigger: AGAGATGTGGAAACCCTCCAACAAACCATCGAGGAG...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGGATTTCTGTCACTTGTaGATCCTTCTCCTCGATGGT +
Preference number: 5 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLDFCHL*ILLLDG
Trigger: ACCATCGAGGAGAAGGATCAACAAGTGACAGAAATC...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTTCACTGATTTCTGCTaGGAGCAAATCTATTTGGTT +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQEFTDFC*EQIYLV
Trigger: AACCAAATAGATTTGCTCCAAGCAGAAATCAGTGAA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTTTTAAGAATTGCCTaGCGGGAGGTTAAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRFLRIA*REVKAS
Trigger: GGAAGCCTTAACCTCCCGCAAGGCAATTCTTAAAAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGCTAAAACCCCTAGGGAGTTCCTTCAGCTTTCACCACCCTATTCTGCAAGAGTGCTGTTCTGTGGCTTaGAATAAAGGTTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: QLKPLGSSFSFHHPILQECCSVA*NKGSSK
Trigger: TTTAGAAGAACCTTTATTCAAAGCCACAGAACAGCA...CTCTTGCAGAATAGGGTGGTGAAAGCTGAAGGAACTCCCTAGGGGTTTTAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGTTTGCTTATGAGTTTTaGCAGTTCATCCAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLFAYEF*QFIQFR
Trigger: CCTAAACTGGATGAACTGCAAAAACTCATAAGCAAA...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTTTTGCTTATGAGTTTTaGCAGTTCATCCAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSFAYEF*QFIQFR
Trigger: CCTAAACTGGATGAACTGCAAAAACTCATAAGCAAA...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGACTCTCATCATGCTCTTaGGCTTGCATTTCTAGCTGT +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRLSSCS*ACISSC
Trigger: ACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGAG...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAATTTTGAGCAGAAACTaGGCTTTCCACATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRILSRN*AFHICQ
Trigger: CTGGCAGATGTGGAAAGCCAAGTTTCTGCTCAAAAT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCGCTGTCTCCTTTAGTTaGGTAACTCTGGAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFAVSFS*VTLESS
Trigger: AGAACTCTCCAGAGTTACCAAACTAAAGGAGACAGC...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCGTTCCTGAAGTTCCTTaGCATGGCTTTTATTTCCGG +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIVPEVP*HGFYFR
Trigger: CCGGAAATAAAAGCCATGCAAAGGAACTTCAGGAAC...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTCATCTAGCAGGACTTaGAAGCTAGCTAATTCTGCT +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKSSSRT*KLANSA
Trigger: AGCAGAATTAGCTAGCTTCAAAGTCCTGCTAGATGA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTGTCTGCTAGGACCCTaGCTGCTTCACTTTGAGTGT +
Preference number: 5 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVCLLGP*LLHFEC
Trigger: ACACTCAAAGTGAAGCAGCAAGGGTCCTAGCAGACA...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGCCTGAATCTCTCCAATaGTCTCTTCCAAGTGGACTT +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKPESLQ*SLPSGL
Trigger: AAGTCCACTTGGAAGAGACAATTGGAGAGATTCAGG...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTGACTCCCAAATCTGCTaGTCATGTTCAAGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVDSQIC*SCSSLE
Trigger: TTCCAGGCTTGAACATGACAAGCAGATTTGGGAGTC...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GAGGCAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTAAGATCAGTCTCCAGTaGTTCATAACTGAACTTAGA +
Preference number: 5 (lower is better)
Translates to: EAGNRHKWNSILAVLLRSKISLQ*FITELR
Trigger: TCTAAGTTCAGTTATGAACAACTGGAGACTGATCTT...AGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATTCAGCAATAGCTACTaGGATTGCCTCTTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRFSNSY*DCLFLA
Trigger: GGCAAGGAAGAGGCAATCCAAGTAGCTATTGCTGAA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAGCGGTCTCGATCATTTaGGAGAGAAGACATGGATTT +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPAVSII*ERRHGF
Trigger: AAATCCATGTCTTCTCTCCAAAATGATCGAGACCGC...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTGCAGCAGCCTCTaGGATGAGTTGGTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: QDLITTVDLEQISQPTCLLCSSL*DELVFF
Trigger: GAAAAAGACCAACTCATCCAAGAGGCTGCTGCAGAG...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTCAGACTCCTGAAGAAGCTGCTTTTGTaGGCTGTCCTTTATTGTTAT +
Preference number: 5 (lower is better)
Translates to: STSRGQELQCGVRPVRLLKKLLL*AVLYCY
Trigger: ATAACAATAAAGGACAGCCAACAAAAGCAGCTTCTT...CAGGAGTCTGACTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATAGACTGGCCATAGCCTaGGAAAAGGACTGCACTTGG +
Preference number: 5 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDRLAIA*EKDCTW
Trigger: CCAAGTGCAGTCCTTTTCCAAGGCTATGGCCAGTCT...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTGCCTGTCTTTGGTATaGCACTTTGAGAGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVCLSLV*HFERLS
Trigger: ACTCAGCCTCTCAAAGTGCAATACCAAAGACAGGCA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATCCTTTAAGCTGTCATaGAGCTGGGTCCTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRSFKLS*SWVLRS
Trigger: ACTTCTCAGGACCCAGCTCAATGACAGCTTAAAGGA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTCAAGAGGTCAGGAGTaGCAGTGTGGTGTTAGACCA +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLSRGQE*QCGVRP
Trigger: TGGTCTAACACCACACTGCAACTCCTGACCTCTTGA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGCATGCAAAACAACATTaGCTAATCCTGATAATCGGC +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKHAKQH*LILIIG
Trigger: GCCGATTATCAGGATTAGCAAATGTTGTTTTGCATG...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGACTTCTCCTGGAGCTGTaGCTTCATCATTACAAATTC +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRLLLEL*LHHYKF
Trigger: GAATTTGTAATGATGAAGCAACAGCTCCAGGAGAAG...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGTGACTGCCTGTGTGCCCTCATTATAAACATCTGGGAAAGAAGTCTGAGATGCTTTTCCAGTAGAATCTaGGACTCCTCTCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: SDCLCALIINIWERSLRCFSSRI*DSSLSV
Trigger: AACAGAAAGAGAGGAGTCCAAGATTCTACTGGAAAA...GCATCTCAGACTTCTTTCCCAGATGTTTATAATGAGGGCACACAGGCAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTGCAGAAGAGCTCCTCTaGTTGGCAATATCAACAATG +
Preference number: 5 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVAEELL*LAISTM
Trigger: CATTGTTGATATTGCCAACAAGAGGAGCTCTTCTGC...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGACACCATCCTGCTTTGTaGATTTCAATTCTACTCCAG +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRHHPAL*ISILLQ
Trigger: CTGGAGTAGAATTGAAATCAACAAAGCAGGATGGTG...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGGTGAATGCACTGCTGTaGTTGTCAGCATTTTTCTTA +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQVNALL*LSAFFL
Trigger: TAAGAAAAATGCTGACAACAACAGCAGTGCATTCAC...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCGTTGTCATGGGCAGTTaGGCTTTCATAATCAAGTCT +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIVVMGS*AFIIKS
Trigger: AGACTTGATTATGAAAGCCAAACTGCCCATGACAAC...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTGTTCAGTGAGCAGGTaGTCATGGGCAGTTTGGCTT +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPCSVSR*SWAVWL
Trigger: AAGCCAAACTGCCCATGACAACCTGCTCACTGAACA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTGTTCAGTGAGCAGGTaGTCATGGGCAGTTTGGCTT +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQICSVSR*SWAVWL
Trigger: AAGCCAAACTGCCCATGACAACCTGCTCACTGAACA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTATTTTGCAGCTGGCTTaGCAGGCTTCTTATCAGGGT +
Preference number: 5 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVILQLA*QASYQG
Trigger: ACCCTGATAAGAAGCCTGCAAAGCCAGCTGCAAAAT...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTGTTCTTCCACTTTACTaGAGATATGCCTTACACGTT +
Preference number: 5 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSVLPLY*RYALHV
Trigger: AACGTGTAAGGCATATCTCAAGTAAAGTGGAAGAAC...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCCAATCTACTGACTCTTaGCAGAAGCTCCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFQSTDS*QKLLSV
Trigger: AACAGAAAGGAGCTTCTGCAAAGAGTCAGTAGATTG...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAATCTACTGACTCTTaGCAGAAGCTCCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPQSTDS*QKLLSV
Trigger: AACAGAAAGGAGCTTCTGCAAAGAGTCAGTAGATTG...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGACTTGGTGAGACGTTCAATGGTACCTCTGGCCAAAGACAATTCCTCTTGGAGTTTGCTTATGAGTTTTaGCAGTTCATCCAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: RLGETFNGTSGQRQFLLEFAYEF*QFIQFR
Trigger: CCTAAACTGGATGAACTGCAAAAACTCATAAGCAAA...CTCCAAGAGGAATTGTCTTTGGCCAGAGGTACCATTGAACGTCTCACCAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGGGAAATAAGGGCAGCTaGCAGTTTCCTTTGTATTTG +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKGNKGS*QFPLYL
Trigger: CAAATACAAAGGAAACTGCAAGCTGCCCTTATTTCC...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAGGAAATAAGGGCAGCTaGCAGTTTCCTTTGTATTTG +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPGNKGS*QFPLYL
Trigger: CAAATACAAAGGAAACTGCAAGCTGCCCTTATTTCC...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTACATCTGCCAGAGACTaGGTGAGACGTTCAATGGTA +
Preference number: 5 (lower is better)
Translates to: QDLITTVDLEQISQPTCLTSARD*VRRSMV
Trigger: TACCATTGAACGTCTCACCAAGTCTCTGGCAGATGT...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTCTTTTTGTAGCTCCTaGTGTTTCTCTTGCCACTCA +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVISFCSS*CFSCHS
Trigger: TGAGTGGCAAGAGAAACACAAGGAGCTACAAAAAGA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTGTTTCATACTCCATTTaGACCCTTTCAAGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSVSYSI*TLSSSS
Trigger: GGAAGAACTTGAAAGGGTCAAAATGGAGTATGAAAC...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGGTTCACCATCCTTTGTaGATATCTGACTCAGTAAGG +
Preference number: 5 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKVHHPL*ISDSVR
Trigger: CCTTACTGAGTCAGATATCAACAAAGGATGGTGAAC...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGGTTCACCATCCTTTGTaGATATCTGACTCAGTAAGG +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKVHHPL*ISDSVR
Trigger: CCTTACTGAGTCAGATATCAACAAAGGATGGTGAAC...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAGTTCCTGAAGTTCCTTaGCATGGCTTTTATTTCCGG +
Preference number: 5 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRVPEVP*HGFYFR
Trigger: CCGGAAATAAAAGCCATGCAAAGGAACTTCAGGAAC...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTTCATCTAGCAGGACTTaGAAGCTAGCTAATTCTGCT +
Preference number: 5 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSSSSRT*KLANSA
Trigger: AGCAGAATTAGCTAGCTTCAAAGTCCTGCTAGATGA...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTTTTTCAACTTGAGATaGTCTGCTAGGACCCTTGCT +
Preference number: 5 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKFFNLR*SARTLA
Trigger: AGCAAGGGTCCTAGCAGACAATCTCAAGTTGAAAAA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTTTTCAACTTGAGATaGTCTGCTAGGACCCTTGCT +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRFFNLR*SARTLA
Trigger: AGCAAGGGTCCTAGCAGACAATCTCAAGTTGAAAAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTCCTGAATCTCTCCAATaGTCTCTTCCAAGTGGACTT +
Preference number: 5 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVPESLQ*SLPSGL
Trigger: AAGTCCACTTGGAAGAGACAATTGGAGAGATTCAGG...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTGACTCCCAAATCTGCTaGTCATGTTCAAGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVDSQIC*SCSSLE
Trigger: TTCCAGGCTTGAACATGACAAGCAGATTTGGGAGTC...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATTGAATATCAGCCTCTaGCTGCCTTATGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRLNISL*LPYDPF
Trigger: GAAGGGATCATAAGGCAGCAAGAGGCTGATATTCAA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTGGATTGCCTCTTCCTaGCCAGAAAGCAGGCTTATA +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLWIASS*PESRLI
Trigger: TATAAGCCTGCTTTCTGGCAAGGAAGAGGCAATCCA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTTTCAGCAATAGCTACTaGGATTGCCTCTTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: QDLITTVDLEQISQPTCLFSNSY*DCLFLA
Trigger: GGCAAGGAAGAGGCAATCCAAGTAGCTATTGCTGAA...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCAGTTCTGCATCTAGCTaGGCATTCTCAGAATTGAGA +
Preference number: 5 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFSSASS*AFSELR
Trigger: TCTCAATTCTGAGAATGCCAAGCTAGATGCAGAACT...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAAGTTCTGCATCTAGCTaGGCATTCTCAGAATTGAGA +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRSSASS*AFSELR
Trigger: TCTCAATTCTGAGAATGCCAAGCTAGATGCAGAACT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTTCAAGAAGCTGCTTTaGTTGGCTGTCCTTTATTGT +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKFKKLL*LAVLYC
Trigger: ACAATAAAGGACAGCCAACAAAAGCAGCTTCTTGAA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAGCAATTGCTCATCTTaGGATAGGAGCTGTTGGTTA +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKSNCSS*DRSCWL
Trigger: TAACCAACAGCTCCTATCCAAAGATGAGCAATTGCT...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTGCTTTTGTCTTATCTaGATACTCCTGAAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKCFCLI*ILLKLS
Trigger: GCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGTGACTGCCTGTGTGCCCTCATTATAAACATCTGGGAAAGAAGTCTGAGATGCTGCTTTTGTCTTATCTaGATACTCCTGAAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: SDCLCALIINIWERSLRCCFCLI*ILLKLS
Trigger: GCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCA...GCATCTCAGACTTCTTTCCCAGATGTTTATAATGAGGGCACACAGGCAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCCTGCCTGAGCTCTTCTaGCATAATCTGAAATGCTTT +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVILPELF*HNLKCF
Trigger: AAAGCATTTCAGATTATGCAAGAAGAGCTCAGGCAG...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTGGGGATGCCTGTCTTaGGTATTGCACTTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIWGCLS*VLHFER
Trigger: CCTCTCAAAGTGCAATACCAAAGACAGGCATCCCCA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGGTCCTTCGACAACTGTaGCTTGTAAGATCTATTAAC +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKVLRQL*LVRSIN
Trigger: GTTAATAGATCTTACAAGCAACAGTTGTCGAAGGAC...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCTCACCCTCCATCTGTTTCATTTCTTTCTGGTCAAGGACCTCATGATCTGGTCCTTCGACAACTGTaGCTTGTAAGATCTATTAAC +
Preference number: 5 (lower is better)
Translates to: FPHPPSVSFLSGQGPHDLVLRQL*LVRSIN
Trigger: GTTAATAGATCTTACAAGCAACAGTTGTCGAAGGAC...CAGATCATGAGGTCCTTGACCAGAAAGAAATGAAACAGATGGAGGGTGAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTAGAGAATTCCAAGTTTaGAGGGGAGTGGTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVREFQV*RGVVQR
Trigger: TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCACTTTCCGTGAAGAGTaGGAGAGAAGACCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFTFREE*ERRPVN
Trigger: ATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGT...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGACTTTCCGTGAAGAGTaGGAGAGAAGACCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKTFREE*ERRPVN
Trigger: ATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGT...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCATTGAAACCATCCTCTaGGCTTGGCTGAAAGACATT +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIIETIL*AWLKDI
Trigger: AATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAAT...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAATTGAAACCATCCTCTaGGCTTGGCTGAAAGACATT +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRIETIL*AWLKDI
Trigger: AATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAAT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTACTTCTCCCTGCCCTTaGGTGAAAGGAAAGACTTGG +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPTSPCP*VKGKTW
Trigger: CCAAGTCTTTCCTTTCACCAAAGGGCAGGGAGAAGT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGCATGCAAAACAACATTaGCTAATCCTGATAATCGGC +
Preference number: 5 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLHAKQH*LILIIG
Trigger: GCCGATTATCAGGATTAGCAAATGTTGTTTTGCATG...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGAACTCTTGTCATGCTaGGAAAGTTGCTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPELLSC*ESCSSD
Trigger: GTCAGAGGAGCAACTTTCCAAGCATGACAAGAGTTC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTTTCATGAAGACGAACTaGTGTTTCAAAGCGGGCATC +
Preference number: 5 (lower is better)
Translates to: QDLITTVDLEQISQPTCLFMKTN*CFKAGI
Trigger: GATGCCCGCTTTGAAACACAAGTTCGTCTTCATGAA...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340645.9
ENST00000393667.7
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTTCATGAAGACGAACTaGTGTTTCAAAGCGGGCATC +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLFMKTN*CFKAGI
Trigger: GATGCCCGCTTTGAAACACAAGTTCGTCTTCATGAA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTTTTCCAGTAGAATCTaGGACTCCTCTCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKFSSRI*DSSLSV
Trigger: AACAGAAAGAGAGGAGTCCAAGATTCTACTGGAAAA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTGAAGAGCTCCTCTTGTaGGCAATATCAACAATGCTG +
Preference number: 5 (lower is better)
Translates to: QDLITTVDLEQISQPTCLEELLL*AISTML
Trigger: CAGCATTGTTGATATTGCCAACAAGAGGAGCTCTTC...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCGACTGCTCTCTTCATTaGGCATTAAGGGAAAATCTT +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIDCSLH*ALRENL
Trigger: AAGATTTTCCCTTAATGCCAAATGAAGAGAGCAGTC...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCTCAGATGTTCTACTTaGATGTTCAGTGCTCGCCTG +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPLRCST*MFSARL
Trigger: CAGGCGAGCACTGAACATCAAAGTAGAACATCTGAG...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGATCAACTGGTTTAGGTaGCTAATTTCCTTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQINWFR*LISLAF
Trigger: GAAAGCTAAGGAAATTAGCAACCTAAACCAGTTGAT...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTTTCACATCTTTAGATTaGGCTTCTATGCTGAGACTA +
Preference number: 5 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSFTSLD*ASMLRL
Trigger: TAGTCTCAGCATAGAAGCCAAATCTAAAGATGTGAA...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCATTTTGCAGCTGGCTTaGCAGGCTTCTTATCAGGGT +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIILQLA*QASYQG
Trigger: ACCCTGATAAGAAGCCTGCAAAGCCAGCTGCAAAAT...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTGATTTCTGTCACTTGTaGATCCTTCTCCTCGATGGT +
Preference number: 5 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVDFCHL*ILLLDG
Trigger: ACCATCGAGGAGAAGGATCAACAAGTGACAGAAATC...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTGCTGATTTCTGTCACTaGTTGATCCTTCTCCTCGAT +
Preference number: 5 (lower is better)
Translates to: QDLITTVDLEQISQPTCLADFCH*LILLLD
Trigger: ATCGAGGAGAAGGATCAACAAGTGACAGAAATCAGC...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGTTGGTTTGTTTTATCTaGCAAGGTCTGATTCATCTG +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKLVCFI*QGLIHL
Trigger: CAGATGAATCAGACCTTGCAAGATAAAACAAACCAA...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGCTCATCAAACTGTTCTaGCAAGCGATTATAGTCATC +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKLIKLF*QAIIVI
Trigger: GATGACTATAATCGCTTGCAAGAACAGTTTGATGAG...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTTTCTTTCTCACTAAGTaGTCCAGAAAGGTAGCTAAC +
Preference number: 5 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSFFLTK*SRKVAN
Trigger: GTTAGCTACCTTTCTGGACAACTTAGTGAGAAAGAA...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp TTCCCTCACCCTCCATCTGTTTCATTTCTTTCTGGTCAAGGACCTCATGATCTGTCCTCTTGGAGACTTTaGTTTTCTTTTAGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: FPHPPSVSFLSGQGPHDLSSWRL*FSFSAS
Trigger: AGAAGCACTAAAAGAAAACAAAAGTCTCCAAGAGGA...CAGATCATGAGGTCCTTGACCAGAAAGAAATGAAACAGATGGAGGGTGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATCTTTTTGTAGCTCCTaGTGTTTCTCTTGCCACTCA +
Preference number: 5 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRSFCSS*CFSCHS
Trigger: TGAGTGGCAAGAGAAACACAAGGAGCTACAAAAAGA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCGTTTCATACTCCATTTaGACCCTTTCAAGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIVSYSI*TLSSSS
Trigger: GGAAGAACTTGAAAGGGTCAAAATGGAGTATGAAAC...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTTCAGTGACATTCGTTaGGTTATCATGTTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKFSDIR*VIMFLG
Trigger: ACCGAGAAACATGATAACCAAACGAATGTCACTGAA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAAGTAGCTTAGTACTTCAAGAGGTCAGGAGTTGCAGTGTGGTGTTAGACCAGTTAGTTCACCATCCTTaGTTGATATCTGACTCAGTA +
Preference number: 5 (lower is better)
Translates to: QSSLVLQEVRSCSVVLDQLVHHP*LISDSV
Trigger: TACTGAGTCAGATATCAACAAAGGATGGTGAACTAA...CTGGTCTAACACCACACTGCAACTCCTGACCTCTTGAAGTACTAAGCTACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTGTTCCTGAAGTTCCTTaGCATGGCTTTTATTTCCGG +
Preference number: 5 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVVPEVP*HGFYFR
Trigger: CCGGAAATAAAAGCCATGCAAAGGAACTTCAGGAAC...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAAGCACTAATTTTCTCTaGATACCTGATGCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRSTNFL*IPDAVL
Trigger: AAGGACTGCATCAGGTATCAAGAGAAAATTAGTGCT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAAGCACTAATTTTCTCTaGATACCTGATGCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPSTNFL*IPDAVL
Trigger: AAGGACTGCATCAGGTATCAAGAGAAAATTAGTGCT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGCGGTGTTCAACTGCTaGAGCCAGATTTTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPAVFNC*SQIFFG
Trigger: ACCAAAGAAAATCTGGCTCAAGCAGTTGAACACCGC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATCATCTAGCAGGACTTaGAAGCTAGCTAATTCTGCT +
Preference number: 5 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRSSSRT*KLANSA
Trigger: AGCAGAATTAGCTAGCTTCAAAGTCCTGCTAGATGA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTTGAATATCAGCCTCTaGCTGCCTTATGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLLNISL*LPYDPF
Trigger: GAAGGGATCATAAGGCAGCAAGAGGCTGATATTCAA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTAAGATCAGTCTCCAGTaGTTCATAACTGAACTTAGA +
Preference number: 5 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSKISLQ*FITELR
Trigger: TCTAAGTTCAGTTATGAACAACTGGAGACTGATCTT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCGCGGTCTCGATCATTTaGGAGAGAAGACATGGATTT +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLAVSII*ERRHGF
Trigger: AAATCCATGTCTTCTCTCCAAAATGATCGAGACCGC...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGGGAATAGGCACAAATGGAATTCTATCCTGGCTGTCCTTCTCAGGTCTATCTAAGAAGCTGCTTTTGTaGGCTGTCCTTTATTGTTAT +
Preference number: 5 (lower is better)
Translates to: QGIGTNGILSWLSFSGLSKKLLL*AVLYCY
Trigger: ATAACAATAAAGGACAGCCAACAAAAGCAGCTTCTT...AGATAGACCTGAGAAGGACAGCCAGGATAGAATTCCATTTGTGCCTATTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTTCAAGAAGCTGCTTTaGTTGGCTGTCCTTTATTGT +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIFKKLL*LAVLYC
Trigger: ACAATAAAGGACAGCCAACAAAAGCAGCTTCTTGAA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTCCAGCTCCTTATTTaGCTGAAGTTGAACTTCAAG +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRFQLLI*LKLNFK
Trigger: CTTGAAGTTCAACTTCAGCAAAATAAGGAGCTGGAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGTTCCAGCTCCTTATTTaGCTGAAGTTGAACTTCAAG +
Preference number: 5 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLFQLLI*LKLNFK
Trigger: CTTGAAGTTCAACTTCAGCAAAATAAGGAGCTGGAA...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTTCCAGCTCCTTATTTaGCTGAAGTTGAACTTCAAG +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKFQLLI*LKLNFK
Trigger: CTTGAAGTTCAACTTCAGCAAAATAAGGAGCTGGAA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTTCTGCAATTCTCTTTaGAGAGGAGGAAAACAAAGC +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKFCNSL*RGGKQS
Trigger: GCTTTGTTTTCCTCCTCTCAAAAGAGAATTGCAGAA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTTTTGCAGGCACTTTCCGTGAAGAGTTGGAGAGAAGACCTGTAAATGGGAAGATGATCTCTACTATTTaGCAAGGAACTCATAGACCT +
Preference number: 5 (lower is better)
Translates to: VFAGTFREELERRPVNGKMISTI*QGTHRP
Trigger: AGGTCTATGAGTTCCTTGCAAAATAGTAGAGATCAT...CTTCCCATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGTGCCTGCAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTAACCATCCTCTTGGCTaGGCTGAAAGACATTCCTCA +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPNHPLG*AERHSS
Trigger: TGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGCAATTATATCTGAAATaGGCAGGGAAGAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKQLYLK*AGKKML
Trigger: CAGCATCTTCTTCCCTGCCAATTTCAGATATAATTG...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTTTTCCAGTAGAATCTaGGACTCCTCTCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVFSSRI*DSSLSV
Trigger: AACAGAAAGAGAGGAGTCCAAGATTCTACTGGAAAA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGAAGAGCTCCTCTTGTaGGCAATATCAACAATGCTG +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPEELLL*AISTML
Trigger: CAGCATTGTTGATATTGCCAACAAGAGGAGCTCTTC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATGCAGAAGAGCTCCTCTaGTTGGCAATATCAACAATG +
Preference number: 5 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDAEELL*LAISTM
Trigger: CATTGTTGATATTGCCAACAAGAGGAGCTCTTCTGC...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTATCACCATCCTGCTTaGTTGATTTCAATTCTACTC +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVIYHHPA*LISILL
Trigger: GAGTAGAATTGAAATCAACAAAGCAGGATGGTGATA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTATCACCATCCTGCTTaGTTGATTTCAATTCTACTC +
Preference number: 5 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFYHHPA*LISILL
Trigger: GAGTAGAATTGAAATCAACAAAGCAGGATGGTGATA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTCTGCCTGTTCCAGTCTTCGCTCAAGATCTTCATCCTTTTGTTTCATCTGATCAACTGGTTTAGGTaGCTAATTTCCTTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: LFCLFQSSLKIFILLFHLINWFR*LISLAF
Trigger: GAAAGCTAAGGAAATTAGCAACCTAAACCAGTTGAT...CAGATGAAACAAAAGGATGAAGATCTTGAGCGAAGACTGGAACAGGCAGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp TGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGTTCACATCTTTAGATTaGGCTTCTATGCTGAGACTA +
Preference number: 5 (lower is better)
Translates to: CSDVRGERIPSFEGSGPKFTSLD*ASMLRL
Trigger: TAGTCTCAGCATAGAAGCCAAATCTAAAGATGTGAA...CTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTCACATCTTTAGATTaGGCTTCTATGCTGAGACTA +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRFTSLD*ASMLRL
Trigger: TAGTCTCAGCATAGAAGCCAAATCTAAAGATGTGAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTTCACTTTCCTTATTTaGCAGCTGGCTTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPFTFLI*QLALQA
Trigger: AGCCTGCAAAGCCAGCTGCAAAATAAGGAAAGTGAA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATTGGTTTGTTTTATCTaGCAAGGTCTGATTCATCTG +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPLVCFI*QGLIHL
Trigger: CAGATGAATCAGACCTTGCAAGATAAAACAAACCAA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGTTCACTGATTTCTGCTaGGAGCAAATCTATTTGGTT +
Preference number: 5 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKFTDFC*EQIYLV
Trigger: AACCAAATAGATTTGCTCCAAGCAGAAATCAGTGAA...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTCTCTCTTCTGCTGTTCTGTGGCTTaGAATAAAGGTTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: NHHSRFRADQSAHLSSLFCCSVA*NKGSSK
Trigger: TTTAGAAGAACCTTTATTCAAAGCCACAGAACAGCA...GAAGAGAGAAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGATTTGCTTATGAGTTTTaGCAGTTCATCCAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRFAYEF*QFIQFR
Trigger: CCTAAACTGGATGAACTGCAAAAACTCATAAGCAAA...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCCTCTCATCATGCTCTTaGGCTTGCATTTCTAGCTGT +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQILSSCS*ACISSC
Trigger: ACAGCTAGAAATGCAAGCCAAAGAGCATGATGAGAG...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCATCCTCTTGGAGACTTTaGTTTTCTTTTAGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPSSWRL*FSFSAS
Trigger: AGAAGCACTAAAAGAAAACAAAAGTCTCCAAGAGGA...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCCAATTATATCTGAAATTGGCAGGGAAGAAGATGCTGTCCTCCCATGTGATCTCCTCTTGGAGACTTTaGTTTTCTTTTAGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: LQLYLKLAGKKMLSSHVISSWRL*FSFSAS
Trigger: AGAAGCACTAAAAGAAAACAAAAGTCTCCAAGAGGA...GATCACATGGGAGGACAGCATCTTCTTCCCTGCCAATTTCAGATATAATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTATTTTGAGCAGAAACTaGGCTTTCCACATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPILSRN*AFHICQ
Trigger: CTGGCAGATGTGGAAAGCCAAGTTTCTGCTCAAAAT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCTGTCTCCTTCTTGTTaGCCTCTGTGCTTCTTAACT +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPLSPSC*PLCFLT
Trigger: AGTTAAGAAGCACAGAGGCAAACAAGAAGGAGACAG...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCGTTCCTGAAGTTCCTTaGCATGGCTTTTATTTCCGG +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIVPEVP*HGFYFR
Trigger: CCGGAAATAAAAGCCATGCAAAGGAACTTCAGGAAC...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TCTGAAATGCTTTTGTCTTATCTTGATACTCCTGAAGTTGAGCCTTCAGTGGATTTGAATATCAGCCTCTaGCTGCCTTATGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: SEMLLSYLDTPEVEPSVDLNISL*LPYDPF
Trigger: GAAGGGATCATAAGGCAGCAAGAGGCTGATATTCAA...ATCCACTGAAGGCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCATTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp GAAAGAAGAGCATCTCTCTCTCTGTTTAAGAGTCCCTGTTCTTTCAACTGTGCCAAGATCAGTCTCCAGTaGTTCATAACTGAACTTAGA +
Preference number: 5 (lower is better)
Translates to: ERRASLSLFKSPCSFNCAKISLQ*FITELR
Trigger: TCTAAGTTCAGTTATGAACAACTGGAGACTGATCTT...GGCACAGTTGAAAGAACAGGGACTCTTAAACAGAGAGAGAGATGCTCTTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp GTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTTTGAGGGGAGTGGTCCAAAGAAATTTCTTTATCATGTaGCTGACGCAGTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: VLMLEVREFQVLRGVVQRNFFIM*LTQFSN
Trigger: ATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT...TCTTTGGACCACTCCCCTCAAAACTTGGAATTCTCTCACCTCTAACATCAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AATGTGATTCTCAGATTAAGCAGAAGCGTTCAGGCTCAGGGCAGTAGAAGAAAGAATTTCTTTATCATGTaGCTGACGCAGTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: NVILRLSRSVQAQGSRRKNFFIM*LTQFSN
Trigger: ATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT...CTTTCTTCTACTGCCCTGAGCCTGAACGCTTCTGCTTAATCTGAGAATCACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AACCATCCTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCAATCCAACTGTGCCTTTaGCTGAATGTTTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: NHPLGLAERHSSVSFTGPIQLCL*LNVFLF
Trigger: AAAAAGGAAAACATTCAGCAAAAGGCACAGTTGGAT...TGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTGTTGGCTGTCCTTTATaGTTATCACTTGGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: QDLITTVDLEQISQPTCLVGCPL*LSLGSG
Trigger: ACCTGAACCAAGTGATAACAATAAAGGACAGCCAAC...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GCTCTTGAACCTGCTTCTCCAAGACTGCACAGTGATTTAAAAGGTCACCATAGTATGATCTCTACTATTTaGCAAGGAACTCATAGACCT +
Preference number: 5 (lower is better)
Translates to: ALEPASPRLHSDLKGHHSMISTI*QGTHRP
Trigger: AGGTCTATGAGTTCCTTGCAAAATAGTAGAGATCAT...ACTATGGTGACCTTTTAAATCACTGTGCAGTCTTGGAGAAGCAGGTTCAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCAGCAATTGCTCATCTTaGGATAGGAGCTGTTGGTTA +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLSNCSS*DRSCWL
Trigger: TAACCAACAGCTCCTATCCAAAGATGAGCAATTGCT...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGATGCTTTTGTCTTATCTaGATACTCCTGAAGTTGAGC +
Preference number: 5 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRCFCLI*ILLKLS
Trigger: GCTCAACTTCAGGAGTATCAAGATAAGACAAAAGCA...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CTCTTGGCTTGGCTGAAAGACATTCCTCAGTATCTTTTACAGGACCACAAAAGAGTCCTTCGACAACTGTaGCTTGTAAGATCTATTAAC +
Preference number: 5 (lower is better)
Translates to: LLAWLKDIPQYLLQDHKRVLRQL*LVRSIN
Trigger: GTTAATAGATCTTACAAGCAACAGTTGTCGAAGGAC...TCTTTTGTGGTCCTGTAAAAGATACTGAGGAATGTCTTTCAGCCAAGCCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCCATGCAAAACAACATTaGCTAATCCTGATAATCGGC +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLHAKQH*LILIIG
Trigger: GCCGATTATCAGGATTAGCAAATGTTGTTTTGCATG...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTTTCATGAAGACGAACTaGTGTTTCAAAGCGGGCATC +
Preference number: 5 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLFMKTN*CFKAGI
Trigger: GATGCCCGCTTTGAAACACAAGTTCGTCTTCATGAA...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTAGATGCTGTTTCATGTaGTTGCAAGGGCAGTCTATT +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPRCCFM*LQGQSI
Trigger: AATAGACTGCCCTTGCAACAACATGAAACAGCATCT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCGTTGTCATGGGCAGTTaGGCTTTCATAATCAAGTCT +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIVVMGS*AFIIKS
Trigger: AGACTTGATTATGAAAGCCAAACTGCCCATGACAAC...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCGTTCTTCCACTTTACTaGAGATATGCCTTACACGTT +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLVLPLY*RYALHV
Trigger: AACGTGTAAGGCATATCTCAAGTAAAGTGGAAGAAC...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCTTCTGGATAATTGCTaGGTTTTCACTGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVLLDNC*VFTDFC
Trigger: GCAGAAATCAGTGAAAACCAAGCAATTATCCAGAAG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTCTCATCAAACTGTTCTaGCAAGCGATTATAGTCATC +
Preference number: 5 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVLIKLF*QAIIVI
Trigger: GATGACTATAATCGCTTGCAAGAACAGTTTGATGAG...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTGTTTCATACTCCATTTaGACCCTTTCAAGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVVSYSI*TLSSSS
Trigger: GGAAGAACTTGAAAGGGTCAAAATGGAGTATGAAAC...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGTTCACCATCCTTTGTaGATATCTGACTCAGTAAGG +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPVHHPL*ISDSVR
Trigger: CCTTACTGAGTCAGATATCAACAAAGGATGGTGAAC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTTTAGTTCACCATCCTTaGTTGATATCTGACTCAGTA +
Preference number: 5 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVLVHHP*LISDSV
Trigger: TACTGAGTCAGATATCAACAAAGGATGGTGAACTAA...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTCATCTAGCAGGACTTaGAAGCTAGCTAATTCTGCT +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPSSSRT*KLANSA
Trigger: AGCAGAATTAGCTAGCTTCAAAGTCCTGCTAGATGA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTAGCCTCTTGGATGAGTaGGTCTTTTTCCAAGATTAT +
Preference number: 5 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVSLLDE*VFFQDY
Trigger: ATAATCTTGGAAAAAGACCAACTCATCCAAGAGGCT...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTTCTGCATCTAGCTaGGCATTCTCAGAATTGAGA +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQISSASS*AFSELR
Trigger: TCTCAATTCTGAGAATGCCAAGCTAGATGCAGAACT...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTGTTGGCTGTCCTTTATaGTTATCACTTGGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPVGCPL*LSLGSG
Trigger: ACCTGAACCAAGTGATAACAATAAAGGACAGCCAAC...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTTTCCAGCTCCTTATTTaGCTGAAGTTGAACTTCAAG +
Preference number: 5 (lower is better)
Translates to: QDLITTVDLEQISQPTCLFQLLI*LKLNFK
Trigger: CTTGAAGTTCAACTTCAGCAAAATAAGGAGCTGGAA...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGAGTTGGAGAGAAGACCTGTAAATGGGAAGACTGTTCCACTGGAATTGATGTTATGATCTCTACTATTTaGCAAGGAACTCATAGACCT +
Preference number: 5 (lower is better)
Translates to: RVGEKTCKWEDCSTGIDVMISTI*QGTHRP
Trigger: AGGTCTATGAGTTCCTTGCAAAATAGTAGAGATCAT...AACATCAATTCCAGTGGAACAGTCTTCCCATTTACAGGTCTTCTCTCCAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGCAATTGCTCATCTTaGGATAGGAGCTGTTGGTTA +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQISNCSS*DRSCWL
Trigger: TAACCAACAGCTCCTATCCAAAGATGAGCAATTGCT...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTACTTTCCGTGAAGAGTaGGAGAGAAGACCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPTFREE*ERRPVN
Trigger: ATTTACAGGTCTTCTCTCCAACTCTTCACGGAAAGT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTTTTCCAGTAGAATCTaGGACTCCTCTCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIFSSRI*DSSLSV
Trigger: AACAGAAAGAGAGGAGTCCAAGATTCTACTGGAAAA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTCACCATCCTGCTTTGTaGATTTCAATTCTACTCCAG +
Preference number: 5 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLHHPAL*ISILLQ
Trigger: CTGGAGTAGAATTGAAATCAACAAAGCAGGATGGTG...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTATCACCATCCTGCTTaGTTGATTTCAATTCTACTC +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLYHHPA*LISILL
Trigger: GAGTAGAATTGAAATCAACAAAGCAGGATGGTGATA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCATCAACTGGTTTAGGTaGCTAATTTCCTTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLINWFR*LISLAF
Trigger: GAAAGCTAAGGAAATTAGCAACCTAAACCAGTTGAT...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCGTGAATGCACTGCTGTaGTTGTCAGCATTTTTCTTA +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIVNALL*LSAFFL
Trigger: TAAGAAAAATGCTGACAACAACAGCAGTGCATTCAC...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TTACAGGACCACAAAAGATCAGGGTCCTGCAAAATCTCAACAAATATTAGGCTCTTGGTTTGTTTTATCTaGCAAGGTCTGATTCATCTG +
Preference number: 5 (lower is better)
Translates to: LQDHKRSGSCKISTNIRLLVCFI*QGLIHL
Trigger: CAGATGAATCAGACCTTGCAAGATAAAACAAACCAA...GAGCCTAATATTTGTTGAGATTTTGCAGGACCCTGATCTTTTGTGGTCCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTTCTTTCTCACTAAGTaGTCCAGAAAGGTAGCTAAC +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPFFLTK*SRKVAN
Trigger: GTTAGCTACCTTTCTGGACAACTTAGTGAGAAAGAA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTTCAGTGACATTCGTTaGGTTATCATGTTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPFSDIR*VIMFLG
Trigger: ACCGAGAAACATGATAACCAAACGAATGTCACTGAA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGCACTAATTTTCTCTaGATACCTGATGCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQISTNFL*IPDAVL
Trigger: AAGGACTGCATCAGGTATCAAGAGAAAATTAGTGCT...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTAATTTCTTTATCATGTaGCTGACGCAGTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVNFFIM*LTQFSN
Trigger: ATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAAGATTTAATCACCACAGTAGATTTAGAGCAGATCAGTCAGCCCACTTGTCTTAATTTCTTTATCATGTaGCTGACGCAGTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: QDLITTVDLEQISQPTCLNFFIM*LTQFSN
Trigger: ATTGCTGAACTGCGTCAGCAACATGATAAAGAAATT...AAGACAAGTGGGCTGACTGATCTGCTCTAAATCTACTGTGGTGATTAAATCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp GACTGTTCCACTGGAATTGATGTTCTGATGTTAGAGGTGAGAGAATTCCAAGTTATCCAACTGTGCCTTTaGCTGAATGTTTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: DCSTGIDVLMLEVREFQVIQLCL*LNVFLF
Trigger: AAAAAGGAAAACATTCAGCAAAAGGCACAGTTGGAT...AACTTGGAATTCTCTCACCTCTAACATCAGAACATCAATTCCAGTGGAACAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTTCTGCAATTCTCTTTaGAGAGGAGGAAAACAAAGC +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIFCNSL*RGGKQS
Trigger: GCTTTGTTTTCCTCCTCTCAAAAGAGAATTGCAGAA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCATCAACTGGTTTAGGTaGCTAATTTCCTTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQIINWFR*LISLAF
Trigger: GAAAGCTAAGGAAATTAGCAACCTAAACCAGTTGAT...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTCTCATCAAACTGTTCTaGCAAGCGATTATAGTCATC +
Preference number: 5 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLLIKLF*QAIIVI
Trigger: GATGACTATAATCGCTTGCAAGAACAGTTTGATGAG...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTGCTGTTCTGTGGCTTaGAATAAAGGTTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPCCSVA*NKGSSK
Trigger: TTTAGAAGAACCTTTATTCAAAGCCACAGAACAGCA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp TTCCCAGGATGTTGTAACCAAGATTTAATCACCACAGTAGATTTAGAGCAGATCTCCTCTTGGAGACTTTaGTTTTCTTTTAGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: FPGCCNQDLITTVDLEQISSWRL*FSFSAS
Trigger: AGAAGCACTAAAAGAAAACAAAAGTCTCCAAGAGGA...GATCTGCTCTAAATCTACTGTGGTGATTAAATCTTGGTTACAACATCCTGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTTTAGTTCACCATCCTTaGTTGATATCTGACTCAGTA +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPLVHHP*LISDSV
Trigger: TACTGAGTCAGATATCAACAAAGGATGGTGAACTAA...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp CAGATTATTAGGTTTATTGAAACCATCCTCTTGGCTTGGCTGAAAGACATTCCTAAGAAGCTGCTTTTGTaGGCTGTCCTTTATTGTTAT +
Preference number: 5 (lower is better)
Translates to: QIIRFIETILLAWLKDIPKKLLL*AVLYCY
Trigger: ATAACAATAAAGGACAGCCAACAAAAGCAGCTTCTT...AGGAATGTCTTTCAGCCAAGCCAAGAGGATGGTTTCAATAAACCTAATAATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000614479.4
CDS-3UTR CAA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTTTCAAGAAGCTGCTTTaGTTGGCTGTCCTTTATTGT +
Preference number: 5 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLFKKLL*LAVLYC
Trigger: ACAATAAAGGACAGCCAACAAAAGCAGCTTCTTGAA...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTATCCAACTGTGCCTTTaGCTGAATGTTTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLIQLCL*LNVFLF
Trigger: AAAAAGGAAAACATTCAGCAAAAGGCACAGTTGGAT...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS-3UTR CAA 90 bp AGACATGGATTTAACAAAGGAATCCAACTGTGCCTTTTGCTGAATGTTTTCCTTAAGAAGCTGCTTTTGTaGGCTGTCCTTTATTGTTAT +
Preference number: 5 (lower is better)
Translates to: RHGFNKGIQLCLLLNVFLKKLLL*AVLYCY
Trigger: ATAACAATAAAGGACAGCCAACAAAAGCAGCTTCTT...AAGGAAAACATTCAGCAAAAGGCACAGTTGGATTCCTTTGTTAAATCCATGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482512.5
CDS TCA 72 bp CCCAGTCACCATACCTTGGAAAGTTGCTCCTCTGACTaGGGTTCTGTAGGCAGAACAGTCCCTCCTTGTGCT +
Preference number: 6 (lower is better)
Translates to: PSHHTLESCSSD*GSVGRTVPPCA
Trigger: AGCACAAGGAGGGACTGTTCTGCCTACAGAACCTCAGTCAGAGGAGCAACTTTCCAAGGTATGGTGACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472829.1
CDS GCA 72 bp CCCACCAAGGATTCTTCGTGTTCCTCAAGCTTCCTTTaGAGCACCCTCAATTTCTGTGCAGCTTGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: PTKDSSCSSSFL*STLNFCAACSA
Trigger: GGCAGAGCAAGCTGCACAGAAATTGAGGGTGCTGCAAAGGAAGCTTGAGGAACACGAAGAATCCTTGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494517.5
ENST00000614479.4
CDS CAA 72 bp GCCCACCAAGGATTCTTCGTGTTCCTCAAGCTTCCTTaGCAGCACCCTCAATTTCTGTGCAGCTTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: AHQGFFVFLKLP*QHPQFLCSLLC
Trigger: GCAGAGCAAGCTGCACAGAAATTGAGGGTGCTGCAAAGGAAGCTTGAGGAACACGAAGAATCCTTGGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494517.5
ENST00000614479.4
CDS TCA 72 bp TACACCCAGTCACCATACCTTGGAAAGTTGCTCCTCTaGCTGAGGTTCTGTAGGCAGAACAGTCCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: YTQSPYLGKLLL*LRFCRQNSPSL
Trigger: CAAGGAGGGACTGTTCTGCCTACAGAACCTCAGTCAGAGGAGCAACTTTCCAAGGTATGGTGACTGGGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472829.1
CDS CCA 72 bp TGCTGTGCAGCTTGCTCTGCCTGTGTCTGGCTGAGCTaGGCTTGTAAAGTGCTAATGAATTCTTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: CCAACSACVWLS*ACKVLMNSSFS
Trigger: GGAGAAGGAAGAATTCATTAGCACTTTACAAGCCCAGCTCAGCCAGACACAGGCAGAGCAAGCTGCACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340645.9
CDS CAA 72 bp GCCCACCAAGGATTCTTCGTGTTCCTCAAGCTTCCTTaGCAGCACCCTCAATTTCTGTGCAGGTTGTTCTGC +
Preference number: 6 (lower is better)
Translates to: AHQGFFVFLKLP*QHPQFLCRLFC
Trigger: GCAGAACAACCTGCACAGAAATTGAGGGTGCTGCAAAGGAAGCTTGAGGAACACGAAGAATCCTTGGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489400.1
CDS CCA 72 bp TTCTGTGCAGCTTGCTCTGCCTGTGTCTGGCTGAGCTaGGCTTGTAAAGTGCTAATGAATTCTTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: FCAACSACVWLS*ACKVLMNSSFS
Trigger: GGAGAAGGAAGAATTCATTAGCACTTTACAAGCCCAGCTCAGCCAGACACAGGCAGAGCAAGCTGCACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494517.5
ENST00000614479.4
CDS GCA 72 bp ATTAGCATTAGCAGGATTATTGGACAGGCCTCCGTTTaGATTAATATCTCCAATGATTCTGTGATCTCCGCC +
Preference number: 6 (lower is better)
Translates to: ISISRIIGQASV*INISNDSVISA
Trigger: GGCGGAGATCACAGAATCATTGGAGATATTAATGCAAACGGAGGCCTGTCCAATAATCCTGCTAATGCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472475.1
CDS CAA 72 bp CATCTTTCCAGTAACCCATTAGCATTAGCAGGATTATaGGACAGGCCTCCGTTTGCATTAATATCTCCAATG +
Preference number: 6 (lower is better)
Translates to: HLSSNPLALAGL*DRPPFALISPM
Trigger: CATTGGAGATATTAATGCAAACGGAGGCCTGTCCAATAATCCTGCTAATGCTAATGGGTTACTGGAAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472475.1
CDS CAA 72 bp TGTCATCATCTCCTGATAATTCATGCAAAACAACATTaGCTAATCCTGATAATCGGCTCAGCATTTCTAGAA +
Preference number: 6 (lower is better)
Translates to: CHHLLIIHAKQH*LILIIGSAFLE
Trigger: TTCTAGAAATGCTGAGCCGATTATCAGGATTAGCAAATGTTGTTTTGCATGAATTATCAGGAGATGATGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340645.9
ENST00000393667.7
ENST00000482512.5
ENST00000494517.5
ENST00000614479.4