RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNPDA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000113552

Ensembl transcript IDs: ENST00000311337.11, ENST00000500692.6, ENST00000503229.5, ENST00000503794.5, ENST00000504139.5, ENST00000504424.1, ENST00000505689.5, ENST00000507107.1, ENST00000507559.1, ENST00000508177.5, ENST00000510194.5, ENST00000513454.5, ENST00000515747.1

Found 459 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGCCAGGAGGAGGCAGCATCCACTCCATGAAGGCCTAAGACAATaGAAGGAAGCCAGAGCAACAGACCACCTTGGGATCCGGGGAGAA +
Preference number: 1 (lower is better)
Translates to: TARRRQHPLHEGLRQ*KEARATDHLGIRGE
Trigger: TTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGGCTTCCTTTCATTGTCTTAGGCCTTCATGGAGTGGATGCTGCCTCCTCCTGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR CCA 90 bp TGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTaGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTACTAATGAGT +
Preference number: 1 (lower is better)
Translates to: CLPRPSPWLNTTLKL*QCLLPQWTSHLLMS
Trigger: ACTCATTAGTAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR GCA 90 bp GTGCCTTCACTTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTaGAAGAAGGACTCTCAAGACTCTTCAAAGAGGTGGTATCCAATA +
Preference number: 1 (lower is better)
Translates to: VPSLGTMVLNQGAGL*KKDSQDSSKRWYPI
Trigger: TATTGGATACCACCTCTTTGAAGAGTCTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR TCA 90 bp TGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGTTGTATTTCCTaGTGCTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGG +
Preference number: 1 (lower is better)
Translates to: WDPGRRVNGQKGCIS*CSQNIRPHHVNLSR
Trigger: CCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAGCATCAGGAAATACAACCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR CCA 90 bp GCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACTTGGAACAATaGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAG +
Preference number: 1 (lower is better)
Translates to: ALILDIESLCLHLEQ*FSTKGQACARRTLK
Trigger: CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAGGCACAAACTCTCAATATCTAAAATAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR GCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTaGCTTCACTTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGT +
Preference number: 1 (lower is better)
Translates to: QRDCFLALILDIESL*LHLEQWFSTKGQAC
Trigger: ACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR GCA 90 bp AGGGATCGTTTTCTTTCCATTGCACTTGTTACTGACCAAAGAGACTaGTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCAC +
Preference number: 1 (lower is better)
Translates to: RDRFLSIALVTDQRD*FLALILDIESLCLH
Trigger: GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTGGTCAGTAACAAGTGCAATGGAAAGAAAACGATCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR CCA 90 bp GAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTaGGGAAACAATACTAGAAGCATTTGGTGTATTTTCCTGGCACTC +
Preference number: 1 (lower is better)
Translates to: EHQTTPCEFKQDYFK*GNNTRSIWCIFLAL
Trigger: GAGTGCCAGGAAAATACACCAAATGCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGCAAGGGGCAGGCCTGTaGAAGAAGGACTCTCAAGAC +
Preference number: 2 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGQGAGL*KKDSQD
Trigger: GTCTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTG...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACTGTGGCAGTGTCTGTTaGCCCAGTGGACCTCCCACT +
Preference number: 2 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHCGSVC*PSGPPT
Trigger: AGTGGGAGGTCCACTGGGGCAACAGACACTGCCACA...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAATGTGGCAGTGTCTGTTaGCCCAGTGGACCTCCCACT +
Preference number: 2 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTECGSVC*PSGPPT
Trigger: AGTGGGAGGTCCACTGGGGCAACAGACACTGCCACA...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGAACTCACACTTAAGCTaGCTGCCCAGACCGTCCCCT +
Preference number: 2 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGNSHLS*LPRPSP
Trigger: AGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTT...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAGAGAGAAGTTTGACGTaGCTGGGCCCCTTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEERSLT*LGPLRL
Trigger: GAGCCTCAAGGGGCCCAGCCACGTCAAACTTCTCTC...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR CAA 90 bp AGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATaGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTACTAATG +
Preference number: 2 (lower is better)
Translates to: SCLPRPSPWLNTTLK*WQCLLPQWTSHLLM
Trigger: CATTAGTAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGAGTGTGTCATATGTGTaGACCATGGCTGAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: GAGESLRERSLTWLGPLRSVSYV*TMAEAE
Trigger: TTCTGCTTCAGCCATGGTTCACACATATGACACACT...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGCATTGCACTTGTTACTaGCCAAAGAGACTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: GAGESLRERSLTWLGPLRHCTCY*PKRLLP
Trigger: AGGAAGCAGTCTCTTTGGTCAGTAACAAGTGCAATG...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGCAAGGGGCAGGCCTGTaGAAGAAGGACTCTCAAGAC +
Preference number: 2 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLQGAGL*KKDSQD
Trigger: GTCTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTG...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGCCTTCTGCCTTTTGGTaGTGGAGAGTCCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLPSAFW*WRVPEG
Trigger: TCCCTCAGGGACTCTCCAGCACCAAAAGGCAGAAGG...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACCCACCTTCTGCCTTTTaGTGCTGGAGAGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHPPSAF*CWRVPE
Trigger: CTCAGGGACTCTCCAGCACCAAAAGGCAGAAGGTGG...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGCCCAGACCGTCCCCTTaGCTGAACACAACACTGAAA +
Preference number: 2 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGPRPSP*LNTTLK
Trigger: TTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGG...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGAGTGTGTCATATGTGTaGACCATGGCTGAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLESVSYV*TMAEAE
Trigger: TTCTGCTTCAGCCATGGTTCACACATATGACACACT...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGACCTGCCTTTCCCTATaGGTACTTGACACTAGGTCC +
Preference number: 2 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGTCLSL*VLDTRS
Trigger: GGACCTAGTGTCAAGTACCCATAGGGAAAGGCAGGT...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGCGTGGCTGGGCCCCTTaGGGCTCTGGATTTATCAAT +
Preference number: 2 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMRGWAP*GSGFIN
Trigger: ATTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACG...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGATTTCCAGAAAGACCTaGCTTTCCCTATGGGTACTT +
Preference number: 2 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLEISRKT*LSLWVL
Trigger: AAGTACCCATAGGGAAAGGCAGGTCTTTCTGGAAAT...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGCCTTCTGCCTTTTGGTaGTGGAGAGTCCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMPSAFW*WRVPEG
Trigger: TCCCTCAGGGACTCTCCAGCACCAAAAGGCAGAAGG...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGTTAAAACTCCCAACCTaGGTTTGGCAGACATCAAAA +
Preference number: 2 (lower is better)
Translates to: GAGESLRERSLTWLGPLRLKLPT*VWQTSK
Trigger: TTTTGATGTCTGCCAAACCCAGGTTGGGAGTTTTAA...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTAGAGAGAAGTTTGACGTaGCTGGGCCCCTTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLERSLT*LGPLRL
Trigger: GAGCCTCAAGGGGCCCAGCCACGTCAAACTTCTCTC...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGAGCAACAGACCACCTTaGGATCCGGGGAGAAGGGTA +
Preference number: 2 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMSNRPP*DPGRRV
Trigger: TACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCT...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR CAA 90 bp GTTGTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTaGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCA +
Preference number: 2 (lower is better)
Translates to: VVTKLTLKLPAQTVP*AEHNTEIVAVSVAP
Trigger: TGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGATATTGAGAGTTTGTaGCTTCACTTGGAACAATGG +
Preference number: 2 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLEDIESL*LHLEQW
Trigger: CCATTGTTCCAAGTGAAGGCACAAACTCTCAATATC...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTACCTTCTGCCTTTTGGTaGTGGAGAGTCCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLPSAFW*WRVPEG
Trigger: TCCCTCAGGGACTCTCCAGCACCAAAAGGCAGAAGG...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAACTTCACTTGGAACAATaGTTCTCAACCAAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTELHLEQ*FSTKGQ
Trigger: CTGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAG...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTACCACCTTCTGCCTTTTaGTGCTGGAGAGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLPPSAF*CWRVPE
Trigger: CTCAGGGACTCTCCAGCACCAAAAGGCAGAAGGTGG...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAAGGAGAGAAATTCCTaGCGGGAGTGTGTCATATGT +
Preference number: 2 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHKERNS*RECVIC
Trigger: ACATATGACACACTCCCGTCAGGAATTTCTCTCCTT...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACCATTGCACTTGTTACTaGCCAAAGAGACTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHHCTCY*PKRLLP
Trigger: AGGAAGCAGTCTCTTTGGTCAGTAACAAGTGCAATG...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGCCTTCTGCCTTTTGGTaGTGGAGAGTCCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGPSAFW*WRVPEG
Trigger: TCCCTCAGGGACTCTCCAGCACCAAAAGGCAGAAGG...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGCCACCTTCTGCCTTTTaGTGCTGGAGAGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGPPSAF*CWRVPE
Trigger: CTCAGGGACTCTCCAGCACCAAAAGGCAGAAGGTGG...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR CAA 90 bp CAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGTaGTATTTCCTGATGCTCTCAGAACATCAGACCACACCATGTGAA +
Preference number: 2 (lower is better)
Translates to: QTTLGSGEKGKWAKG*YFLMLSEHQTTPCE
Trigger: TTCACATGGTGTGGTCTGATGTTCTGAGAGCATCAGGAAATACAACCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGACAGAGGAGCCACAGTaGGGCTTTCACAAAAACACA +
Preference number: 2 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMTEEPQ*GFHKNT
Trigger: TGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGT...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGATTTCCAGAAAGACCTaGCTTTCCCTATGGGTACTT +
Preference number: 2 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLISRKT*LSLWVL
Trigger: AAGTACCCATAGGGAAAGGCAGGTCTTTCTGGAAAT...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTAACCTGCCTTTCCCTATaGGTACTTGACACTAGGTCC +
Preference number: 2 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLTCLSL*VLDTRS
Trigger: GGACCTAGTGTCAAGTACCCATAGGGAAAGGCAGGT...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGCTTCACTTGGAACAATaGTTCTCAACCAAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMLHLEQ*FSTKGQ
Trigger: CTGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAG...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGGACACTCAGGAGTTGTaGCTAAACTCACACTTAAGC +
Preference number: 2 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMDTQEL*LNSHLS
Trigger: GCTTAAGTGTGAGTTTAGTCACAACTCCTGAGTGTC...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACGATATTGAGAGTTTGTaGCTTCACTTGGAACAATGG +
Preference number: 2 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHDIESL*LHLEQW
Trigger: CCATTGTTCCAAGTGAAGGCACAAACTCTCAATATC...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGTTAAAACTCCCAACCTaGGTTTGGCAGACATCAAAA +
Preference number: 2 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLLKLPT*VWQTSK
Trigger: TTTTGATGTCTGCCAAACCCAGGTTGGGAGTTTTAA...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACCATATGTGTGAACCATaGCTGAAGCAGAACAAAAAG +
Preference number: 2 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHHMCEP*LKQNKK
Trigger: CTTTTTGTTCTGCTTCAGCCATGGTTCACACATATG...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGATTTCCAGAAAGACCTaGCTTTCCCTATGGGTACTT +
Preference number: 2 (lower is better)
Translates to: LEQWFSTKGQACARRTLKISRKT*LSLWVL
Trigger: AAGTACCCATAGGGAAAGGCAGGTCTTTCTGGAAAT...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACACTGACCAAAGAGACTaGTTCCTTGCACTTATTTTA +
Preference number: 2 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHTDQRD*FLALIL
Trigger: TAAAATAAGTGCAAGGAAGCAGTCTCTTTGGTCAGT...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAACTGACCAAAGAGACTaGTTCCTTGCACTTATTTTA +
Preference number: 2 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTETDQRD*FLALIL
Trigger: TAAAATAAGTGCAAGGAAGCAGTCTCTTTGGTCAGT...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAACGGCTTCCACCTTCTaGCTTTTGGTGCTGGAGAGT +
Preference number: 2 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTTASTF*LLVLES
Trigger: ACTCTCCAGCACCAAAAGGCAGAAGGTGGAAGCCGT...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGAGAGAAGTTTGACGTaGCTGGGCCCCTTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWERSLT*LGPLRL
Trigger: GAGCCTCAAGGGGCCCAGCCACGTCAAACTTCTCTC...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGCGTGGCTGGGCCCCTTaGGGCTCTGGATTTATCAAT +
Preference number: 2 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWRGWAP*GSGFIN
Trigger: ATTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACG...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAACCTGCCTTTCCCTATaGGTACTTGACACTAGGTCC +
Preference number: 2 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTTCLSL*VLDTRS
Trigger: GGACCTAGTGTCAAGTACCCATAGGGAAAGGCAGGT...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGTTAAAACTCCCAACCTaGGTTTGGCAGACATCAAAA +
Preference number: 2 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMLKLPT*VWQTSK
Trigger: TTTTGATGTCTGCCAAACCCAGGTTGGGAGTTTTAA...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR CAA 90 bp TGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACTaGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGG +
Preference number: 2 (lower is better)
Translates to: CFLALILDIESLCLH*EQWFSTKGQACARR
Trigger: CCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR CAA 90 bp GACCAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTaGTGCCTTCACTTGGAACAATGGTTCTCAACCAAGGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: DQRDCFLALILDIES*CLHLEQWFSTKGQA
Trigger: GGCCTGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAGTGTGTCATATGTGTaGACCATGGCTGAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTSVSYV*TMAEAE
Trigger: TTCTGCTTCAGCCATGGTTCACACATATGACACACT...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACACATTGCACTTGTTACTaGCCAAAGAGACTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTHCTCY*PKRLLP
Trigger: AGGAAGCAGTCTCTTTGGTCAGTAACAAGTGCAATG...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGACCTGCCTTTCCCTATaGGTACTTGACACTAGGTCC +
Preference number: 2 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWTCLSL*VLDTRS
Trigger: GGACCTAGTGTCAAGTACCCATAGGGAAAGGCAGGT...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGTTAAAACTCCCAACCTaGGTTTGGCAGACATCAAAA +
Preference number: 2 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGLKLPT*VWQTSK
Trigger: TTTTGATGTCTGCCAAACCCAGGTTGGGAGTTTTAA...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR GCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCACGGCTTCCACCTTCTaGCTTTTGGTGCTGGAGAGT +
Preference number: 2 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSTASTF*LLVLES
Trigger: ACTCTCCAGCACCAAAAGGCAGAAGGTGGAAGCCGT...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGCATTGCACTTGTTACTaGCCAAAGAGACTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWHCTCY*PKRLLP
Trigger: AGGAAGCAGTCTCTTTGGTCAGTAACAAGTGCAATG...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACACATATGTGTGAACCATaGCTGAAGCAGAACAAAAAG +
Preference number: 2 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTHMCEP*LKQNKK
Trigger: CTTTTTGTTCTGCTTCAGCCATGGTTCACACATATG...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCTGTCTGTTGCCCCAGTaGACCTCCCACTTACTAATG +
Preference number: 2 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSCLLPQ*TSHLLM
Trigger: CATTAGTAAGTGGGAGGTCCACTGGGGCAACAGACA...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAGTTCACCCACTTATCTaGAGTAACCATACTAGATTA +
Preference number: 2 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTVHPLI*SNHTRL
Trigger: TAATCTAGTATGGTTACTCCAGATAAGTGGGTGAAC...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCAGTGTGTCATATGTGTaGACCATGGCTGAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSSVSYV*TMAEAE
Trigger: TTCTGCTTCAGCCATGGTTCACACATATGACACACT...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR TCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCGACACTCAGGAGTTGTaGCTAAACTCACACTTAAGC +
Preference number: 2 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSDTQEL*LNSHLS
Trigger: GCTTAAGTGTGAGTTTAGTCACAACTCCTGAGTGTC...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACCATATGTGTGAACCATaGCTGAAGCAGAACAAAAAG +
Preference number: 2 (lower is better)
Translates to: QRDCFLALILDIESLCLHHMCEP*LKQNKK
Trigger: CTTTTTGTTCTGCTTCAGCCATGGTTCACACATATG...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGCTGAGGGAGAGAAGTTaGACGTGGCTGGGCCCCTTG +
Preference number: 3 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMLRERS*TWLGPL
Trigger: CAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAG...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR CCA 72 bp AGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTaGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTA +
Preference number: 3 (lower is better)
Translates to: RPSPWLNTTLKL*QCLLPQWTSHL
Trigger: TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACTTTCCCTATGGGTACTaGACACTAGGTCCCAGCACA +
Preference number: 3 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHFPYGY*TLGPST
Trigger: TGTGCTGGGACCTAGTGTCAAGTACCCATAGGGAAA...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGTTAGATATTGAGAGTTaGTGCCTTCACTTGGAACAA +
Preference number: 3 (lower is better)
Translates to: GAGESLRERSLTWLGPLRLDIES*CLHLEQ
Trigger: TTGTTCCAAGTGAAGGCACAAACTCTCAATATCTAA...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTAACGTGGCTGGGCCCCTaGAGGCTCTGGATTTATCAA +
Preference number: 3 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLTWLGP*RLWIYQ
Trigger: TTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACGT...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGTTTCCCTATGGGTACTaGACACTAGGTCCCAGCACA +
Preference number: 3 (lower is better)
Translates to: LEQWFSTKGQACARRTLKFPYGY*TLGPST
Trigger: TGTGCTGGGACCTAGTGTCAAGTACCCATAGGGAAA...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACACTGAGGGAGAGAAGTTaGACGTGGCTGGGCCCCTTG +
Preference number: 3 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTLRERS*TWLGPL
Trigger: CAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAG...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR TCA 72 bp CACAAAAACAGCCAGGAGGAGGCAGCATCCACTCCATaGAGGCCTAAGACAATGAAAGGAAGCCAGAGCAAC +
Preference number: 3 (lower is better)
Translates to: HKNSQEEAASTP*RPKTMKGSQSN
Trigger: GTTGCTCTGGCTTCCTTTCATTGTCTTAGGCCTTCATGGAGTGGATGCTGCCTCCTCCTGGCTGTTTTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR GCA 72 bp CTTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTaGAAGAAGGACTCTCAAGACTCTTCAAAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: LGTMVLNQGAGL*KKDSQDSSKRW
Trigger: CCACCTCTTTGAAGAGTCTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR CCA 72 bp AAGACAATGAAAGGAAGCCAGAGCAACAGACCACCTTaGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGT +
Preference number: 3 (lower is better)
Translates to: KTMKGSQSNRPP*DPGRRVNGQKG
Trigger: ACCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGGCTTCCTTTCATTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGACTCCCAACCTGGGTTaGGCAGACATCAAAATGATG +
Preference number: 3 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGTPNLG*ADIKMM
Trigger: CATCATTTTGATGTCTGCCAAACCCAGGTTGGGAGT...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGCCCAGACCGTCCCCTaGGCTGAACACAACACTGAA +
Preference number: 3 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWAQTVP*AEHNTE
Trigger: TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGC...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGACGTGGCTGGGCCCCTaGAGGCTCTGGATTTATCAA +
Preference number: 3 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWTWLGP*RLWIYQ
Trigger: TTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACGT...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCCTGAGGGAGAGAAGTTaGACGTGGCTGGGCCCCTTG +
Preference number: 3 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSLRERS*TWLGPL
Trigger: CAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAG...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR CCA 72 bp TTAGATATTGAGAGTTTGTGCCTTCACTTGGAACAATaGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGG +
Preference number: 3 (lower is better)
Translates to: LDIESLCLHLEQ*FSTKGQACARR
Trigger: CCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAGGCACAAACTCTCAATATCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR TCA 72 bp GGGAGAAGGGTAAATGGGCAAAAGGGTTGTATTTCCTaGTGCTCTCAGAACATCAGACCACACCATGTGAAT +
Preference number: 3 (lower is better)
Translates to: GRRVNGQKGCIS*CSQNIRPHHVN
Trigger: ATTCACATGGTGTGGTCTGATGTTCTGAGAGCATCAGGAAATACAACCCTTTTGCCCATTTACCCTTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAATTTCCCTATGGGTACTaGACACTAGGTCCCAGCACA +
Preference number: 3 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKFPYGY*TLGPST
Trigger: TGTGCTGGGACCTAGTGTCAAGTACCCATAGGGAAA...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCACGTGGCTGGGCCCCTaGAGGCTCTGGATTTATCAA +
Preference number: 3 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSTWLGP*RLWIYQ
Trigger: TTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACGT...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCTTTCCCTATGGGTACTaGACACTAGGTCCCAGCACA +
Preference number: 3 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSFPYGY*TLGPST
Trigger: TGTGCTGGGACCTAGTGTCAAGTACCCATAGGGAAA...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR GCA 72 bp TGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTaGCTTCACTTGGAACAATGGTTCTCAACCAAGGGG +
Preference number: 3 (lower is better)
Translates to: CFLALILDIESL*LHLEQWFSTKG
Trigger: CCCCTTGGTTGAGAACCATTGTTCCAAGTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR CCA 72 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATaGCTGAAGCAGAACAAAAAGTTTAAAACTCCCAAC +
Preference number: 3 (lower is better)
Translates to: KFLTGVCHMCEP*LKQNKKFKTPN
Trigger: GTTGGGAGTTTTAAACTTTTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR-3UTR CAA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACATTAGATATTGAGAGTTaGTGCCTTCACTTGGAACAA +
Preference number: 3 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTLDIES*CLHLEQ
Trigger: TTGTTCCAAGTGAAGGCACAAACTCTCAATATCTAA...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
3UTR TCA 72 bp AGGAAGGGATCGTTTTCTTTCCATTGCACTTGTTACTaGCCAAAGAGACTGCTTCCTTGCACTTATTTTAGA +
Preference number: 3 (lower is better)
Translates to: RKGSFSFHCTCY*PKRLLPCTYFR
Trigger: TCTAAAATAAGTGCAAGGAAGCAGTCTCTTTGGTCAGTAACAAGTGCAATGGAAAGAAAACGATCCCTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGCGCCTCCCTCATCCCTaGCCCTACCGGAACGGGATA +
Preference number: 4 (lower is better)
Translates to: GAGESLRERSLTWLGPLRRLPHP*PYRNGI
Trigger: TATCCCGTTCCGGTAGGGGCAGGGATGAGGGAGGCG...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAACCGCGCGGTCGTCGGTaGGGTACAGCGTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEPRGRR*GTACPP
Trigger: TGGGGGACACGCTGTACCCCACCGACGACCGCGCGG...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503794.5
CDS-3UTR CCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAGGAAAGAGGCGAAGGTaGCCCGCGCGGTCGTCGGTG +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEGKRRR*PARSSV
Trigger: CACCGACGACCGCGCGGGCCACCTTCGCCTCTTTCC...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503794.5
CDS-3UTR TCA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGCGTGGCTGGGCCCCTTaGGGCTCTGGATTTATCAAT +
Preference number: 4 (lower is better)
Translates to: GAGESLRERSLTWLGPLRRGWAP*GSGFIN
Trigger: ATTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACG...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGCACACACAAACACGGTaGGGGGATGCTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLEHTQTR*GDAAGR
Trigger: CCTTCCAGCAGCATCCCCGCACCGTGTTTGTGTGTG...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGCAAGGGGCAGGCCTGTaGAAGAAGGACTCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: GAGESLRERSLTWLGPLRQGAGL*KKDSQD
Trigger: GTCTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTG...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGCTTGTAGCAGCCAAGTaGGGTACTCCCAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLELVAAK*GTPSGE
Trigger: CTCCCCACTGGGAGTACCCCACTTGGCTGCTACAAG...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGTCTTCACACGGGTCCTaGACACCAGACTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLESSHGS*TPDWSL
Trigger: CAGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAGA...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGAGAGAAGTTTGACGTaGCTGGGCCCCTTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLEERSLT*LGPLRL
Trigger: GAGCCTCAAGGGGCCCAGCCACGTCAAACTTCTCTC...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAATGGGGAGCCCCAGGGTaGAGTACTTCTCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEWGAPG*STSLAL
Trigger: CAGGGCCAGAGAAGTACTTCACCCTGGGGCTCCCCA...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAACGGTGCGGGGATGCTaGTGGAAGGCAGACACGGTC +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTETVRGC*WKADTV
Trigger: GACCGTGTCTGCCTTCCAGCAGCATCCCCGCACCGT...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACACGGTGCGGGGATGCTaGTGGAAGGCAGACACGGTC +
Preference number: 4 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHTVRGC*WKADTV
Trigger: GACCGTGTCTGCCTTCCAGCAGCATCCCCGCACCGT...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGAACTCACACTTAAGCTaGCTGCCCAGACCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLENSHLS*LPRPSP
Trigger: AGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTT...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGAGCAACAGACCACCTTaGGATCCGGGGAGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLESNRPP*DPGRRV
Trigger: TACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCT...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGACGGCTTCCACCTTCTaGCTTTTGGTGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLETASTF*LLVLES
Trigger: ACTCTCCAGCACCAAAAGGCAGAAGGTGGAAGCCGT...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAACCTACTGGCCCACCTTaGTTTGCGAACCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEPTGPP*FANPSG
Trigger: CCCAGAGGGGTTCGCAAAGCAAGGTGGGCCAGTAGG...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR TCA 90 bp AAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGAGAATTAGCCTGCCATCTTGGGGAGCCCCAGGGTaGAGTACTTCTCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KSAGPIRLCPGVRISLPSWGAPG*STSLAL
Trigger: CAGGGCCAGAGAAGTACTTCACCCTGGGGCTCCCCA...AGATGGCAGGCTAATTCTCACACCAGGGCACAGTCTAATGGGTCCAGCTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR TCA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGGAAGGCCTAAGACAATaGAAGGAAGCCAGAGCAACA +
Preference number: 4 (lower is better)
Translates to: GAGESLRERSLTWLGPLREGLRQ*KEARAT
Trigger: TGTTGCTCTGGCTTCCTTTCATTGTCTTAGGCCTTC...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGGCAGCATCCACTCCATaGAGGCCTAAGACAATGAAA +
Preference number: 4 (lower is better)
Translates to: GAGESLRERSLTWLGPLRAASTP*RPKTMK
Trigger: TTTCATTGTCTTAGGCCTTCATGGAGTGGATGCTGC...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGACGGTGCGGGGATGCTaGTGGAAGGCAGACACGGTC +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKTVRGC*WKADTV
Trigger: GACCGTGTCTGCCTTCCAGCAGCATCCCCGCACCGT...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGACGGTGCGGGGATGCTaGTGGAAGGCAGACACGGTC +
Preference number: 4 (lower is better)
Translates to: QVDQVRKSAGPIRLCPGVTVRGC*WKADTV
Trigger: GACCGTGTCTGCCTTCCAGCAGCATCCCCGCACCGT...CACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR GCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAACACACACAAACACGGTaGGGGGATGCTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEHTQTR*GDAAGR
Trigger: CCTTCCAGCAGCATCCCCGCACCGTGTTTGTGTGTG...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGTGTGGCAGTGTCTGTTaGCCCAGTGGACCTCCCACT +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLCGSVC*PSGPPT
Trigger: AGTGGGAGGTCCACTGGGGCAACAGACACTGCCACA...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACTCTTCACACGGGTCCTaGACACCAGACTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHSSHGS*TPDWSL
Trigger: CAGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAGA...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGTCTTCACACGGGTCCTaGACACCAGACTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLSSHGS*TPDWSL
Trigger: CAGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAGA...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAACCAGGATGGTATCCATaGCCAGCGTCTTCACACGGG +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEPGWYP*PASSHG
Trigger: CCCGTGTGAAGACGCTGGCCATGGATACCATCCTGG...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGGTCATGGGATCATGCTaGGCCACTAGAGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLVMGSC*ATRAGG
Trigger: CCCACCTGCTCTAGTGGCCCAGCATGATCCCATGAC...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR TCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGACAGAGGAGCCACAGTaGGGCTTTCACAAAAACACA +
Preference number: 4 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLETEEPQ*GFHKNT
Trigger: TGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGT...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGGACACTCAGGAGTTGTaGCTAAACTCACACTTAAGC +
Preference number: 4 (lower is better)
Translates to: GAGESLRERSLTWLGPLRDTQEL*LNSHLS
Trigger: GCTTAAGTGTGAGTTTAGTCACAACTCCTGAGTGTC...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp AAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGAGAATTAGCCTGCCATCTAACACGGTGCGGGGATaGTGCTGGAAGGCAGACACG +
Preference number: 4 (lower is better)
Translates to: KSAGPIRLCPGVRISLPSNTVRG*CWKADT
Trigger: CGTGTCTGCCTTCCAGCAGCATCCCCGCACCGTGTT...AGATGGCAGGCTAATTCTCACACCAGGGCACAGTCTAATGGGTCCAGCTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR GCA 90 bp GGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGCACACACAAACACGGTaGGGGGATGCTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GKLIKSGSQLDPLDCALVHTQTR*GDAAGR
Trigger: CCTTCCAGCAGCATCCCCGCACCGTGTTTGTGTGTG...CACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR GCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAACAAGGGGCAGGCCTGTaGAAGAAGGACTCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEQGAGL*KKDSQD
Trigger: GTCTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTG...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGAACTCACACTTAAGCTaGCTGCCCAGACCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLNSHLS*LPRPSP
Trigger: AGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTT...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGTGGGGCAATGAGCTCTaGCTGGGGAGCTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMWGNEL*LGSCVL
Trigger: GAGCACACAGCTCCCCAGGCAGAGCTCATTGCCCCA...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR CCA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGGGCCCTGGGTTAAACTaGATGATGCGGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGGPGLN*MMRFLM
Trigger: CATCAGGAACCGCATCATCCAGTTTAACCCAGGGCC...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAACACCAGACTGGAGCCTaGCTCGTTGAAGGCAATGTG +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEHQTGA*LVEGNV
Trigger: CACATTGCCTTCAACGAGCCAGGCTCCAGTCTGGTG...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACCACCAGACTGGAGCCTaGCTCGTTGAAGGCAATGTG +
Preference number: 4 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHHQTGA*LVEGNV
Trigger: CACATTGCCTTCAACGAGCCAGGCTCCAGTCTGGTG...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGAGCAACAGACCACCTTaGGATCCGGGGAGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLSNRPP*DPGRRV
Trigger: TACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCT...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGCCCTCCGATCCCTCCTaGAAAATGTGTGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKPSDPS*KMCEGG
Trigger: GCCGCCCTCACACATTTTCCAGGAGGGATCGGAGGG...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503794.5
CDS-3UTR CCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAGAGGGGTCTTCCTACTaGCCCACCTTGCTTTGCGAA +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEEGSSY*PTLLCE
Trigger: TTCGCAAAGCAAGGTGGGCCAGTAGGAAGACCCCTC...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR TCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGAAGGAGAGAAATTCCTaGCGGGAGTGTGTCATATGT +
Preference number: 4 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLEKERNS*RECVIC
Trigger: ACATATGACACACTCCCGTCAGGAATTTCTCTCCTT...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGCACACACAAACACGGTaGGGGGATGCTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMHTQTR*GDAAGR
Trigger: CCTTCCAGCAGCATCCCCGCACCGTGTTTGTGTGTG...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGGGCCCTGGGTTAAACTaGATGATGCGGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLGPGLN*MMRFLM
Trigger: CATCAGGAACCGCATCATCCAGTTTAACCCAGGGCC...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGCTTGTAGCAGCCAAGTaGGGTACTCCCAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMLVAAK*GTPSGE
Trigger: CTCCCCACTGGGAGTACCCCACTTGGCTGCTACAAG...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp ACACTGGGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTTGTAGCAGCCAAGTaGGGTACTCCCAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TLGKLIKSGSQLDPLDCALVAAK*GTPSGE
Trigger: CTCCCCACTGGGAGTACCCCACTTGGCTGCTACAAG...GGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCCCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp ACACTGGGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCTCTTCACACGGGTCCTaGACACCAGACTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TLGKLIKSGSQLDPLDCASSHGS*TPDWSL
Trigger: CAGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAGA...GGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCCCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp CAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGCCAGGATGGTATCCATaGCCAGCGTCTTCACACGGG +
Preference number: 4 (lower is better)
Translates to: QVDQVRKSAGPIRLCPGVPGWYP*PASSHG
Trigger: CCCGTGTGAAGACGCTGGCCATGGATACCATCCTGG...CACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGTCACTCCCTCCTCGATaGCCTTGTACAGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGSLPPR*PCTEQM
Trigger: CATTTGCTCTGTACAAGGCCATCGAGGAGGGAGTGA...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGGAGAGAAGTTTGACGTaGCTGGGCCCCTTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKERSLT*LGPLRL
Trigger: GAGCCTCAAGGGGCCCAGCCACGTCAAACTTCTCTC...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGGAGAGAAGTTTGACGTaGCTGGGCCCCTTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMERSLT*LGPLRL
Trigger: GAGCCTCAAGGGGCCCAGCCACGTCAAACTTCTCTC...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGCCCAGACCGTCCCCTTaGCTGAACACAACACTGAAA +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLPRPSP*LNTTLK
Trigger: TTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGG...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAACTTTGCGAACCCCTCTaGGTCTTCAGTTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTELCEPL*VFSFPQ
Trigger: TTGGGGGAAACTGAAGACCCAGAGGGGTTCGCAAAG...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGGCAATGAGCTCTGCCTaGGGAGCTGTGTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMAMSSA*GAVCSL
Trigger: GAGAGAGCACACAGCTCCCCAGGCAGAGCTCATTGC...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR TCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGTGGTGGGCACCTTGGTaGGTTCTCCATCGAAGAACC +
Preference number: 4 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMWWAPW*VLHRRT
Trigger: GGTTCTTCGATGGAGAACTCACCAAGGTGCCCACCA...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGTGGTGGGCACCTTGGTaGGTTCTCCATCGAAGAACC +
Preference number: 4 (lower is better)
Translates to: QVDQVRKSAGPIRLCPGVWWAPW*VLHRRT
Trigger: GGTTCTTCGATGGAGAACTCACCAAGGTGCCCACCA...CACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR TCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGCAGTTTCTTTCTCTTTaGTACTGTACAAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLEQFLSL*YCTRGP
Trigger: TGGACCCCTTGTACAGTATCAAAGAGAAAGAAACTG...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGAAGGGTTGTATTTCCTaGTGCTCTCAGAACATCAGA +
Preference number: 4 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLEKGCIS*CSQNIR
Trigger: TCTGATGTTCTGAGAGCATCAGGAAATACAACCCTT...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGGCAGCATCCACTCCATaGAGGCCTAAGACAATGAAA +
Preference number: 4 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGAASTP*RPKTMK
Trigger: TTTCATTGTCTTAGGCCTTCATGGAGTGGATGCTGC...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGCGGTTAGTGGGAGTGTaGAGGAAAGAGGCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKRLVGV*RKEAKV
Trigger: CACCTTCGCCTCTTTCCTTCACACTCCCACTAACCG...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503794.5
CDS-3UTR GCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGAACACGGTGCGGGGATaGTGCTGGAAGGCAGACACG +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGNTVRG*CWKADT
Trigger: CGTGTCTGCCTTCCAGCAGCATCCCCGCACCGTGTT...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGCCTTCTGCCTTTTGGTaGTGGAGAGTCCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKPSAFW*WRVPEG
Trigger: TCCCTCAGGGACTCTCCAGCACCAAAAGGCAGAAGG...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACTTCACAGACTTGCTTTaGGAACCCCTCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHFTDLL*EPLWVF
Trigger: GAAGACCCAGAGGGGTTCGCAAAGCAAGTCTGTGAA...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503794.5
CDS-3UTR CCA 90 bp GGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGGGCCCTGGGTTAAACTaGATGATGCGGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: GKLIKSGSQLDPLDCALVGPGLN*MMRFLM
Trigger: CATCAGGAACCGCATCATCCAGTTTAACCCAGGGCC...CACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp CAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGCACCAGACTGGAGCCTaGCTCGTTGAAGGCAATGTG +
Preference number: 4 (lower is better)
Translates to: QVDQVRKSAGPIRLCPGVHQTGA*LVEGNV
Trigger: CACATTGCCTTCAACGAGCCAGGCTCCAGTCTGGTG...CACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGCTTTCAGCTCCAAGGTaGCATCCTCGTCACACACAA +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLLSAPR*HPRHTQ
Trigger: TTGTGTGTGACGAGGATGCCACCTTGGAGCTGAAAG...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAACCTGCCTTTCCCTATaGGTACTTGACACTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTETCLSL*VLDTRS
Trigger: GGACCTAGTGTCAAGTACCCATAGGGAAAGGCAGGT...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACTGTCTGTTGCCCCAGTaGACCTCCCACTTACTAATG +
Preference number: 4 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHCLLPQ*TSHLLM
Trigger: CATTAGTAAGTGGGAGGTCCACTGGGGCAACAGACA...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAATGGGGAGCCCCAGGGTaGAGTACTTCTCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKWGAPG*STSLAL
Trigger: CAGGGCCAGAGAAGTACTTCACCCTGGGGCTCCCCA...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTATGGTGGGCACCTTGGTaGGTTCTCCATCGAAGAACC +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLWWAPW*VLHRRT
Trigger: GGTTCTTCGATGGAGAACTCACCAAGGTGCCCACCA...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGAGTGTGTCATATGTGTaGACCATGGCTGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGSVSYV*TMAEAE
Trigger: TTCTGCTTCAGCCATGGTTCACACATATGACACACT...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTACGTGGCTGGGCCCCTTaGGGCTCTGGATTTATCAAT +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLRGWAP*GSGFIN
Trigger: ATTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACG...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGACAGAGGAGCCACAGTaGGGCTTTCACAAAAACACA +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLTEEPQ*GFHKNT
Trigger: TGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGT...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAGAAGGCCTAAGACAATaGAAGGAAGCCAGAGCAACA +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEEGLRQ*KEARAT
Trigger: TGTTGCTCTGGCTTCCTTTCATTGTCTTAGGCCTTC...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACGCAGCATCCACTCCATaGAGGCCTAAGACAATGAAA +
Preference number: 4 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHAASTP*RPKTMK
Trigger: TTTCATTGTCTTAGGCCTTCATGGAGTGGATGCTGC...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTAGACCTAAGTTCTCTCTaGGCCGTTTCCTCACGGACG +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLDLSSL*AVSSRT
Trigger: CGTCCGTGAGGAAACGGCTCAGAGAGAACTTAGGTC...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500692.6
CDS-3UTR TCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGGACCTAAGTTCTCTCTaGGCCGTTTCCTCCTATGTA +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLDLSSL*AVSSYV
Trigger: TACATAGGAGGAAACGGCTCAGAGAGAACTTAGGTC...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGCCTTCCCAAGCTGTCTaGGCCAGGAAAAAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMPSQAV*ARKKAF
Trigger: AAAGGCCTTTTTCCTGGCTCAGACAGCTTGGGAAGG...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR GCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGCACACACAAACACGGTaGGGGGATGCTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGHTQTR*GDAAGR
Trigger: CCTTCCAGCAGCATCCCCGCACCGTGTTTGTGTGTG...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTACAAGGGGCAGGCCTGTaGAAGAAGGACTCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLQGAGL*KKDSQD
Trigger: GTCTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTG...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCGGTCCCGACCCCGAGTaGCGTAGGGCTGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSGPDPE*RRAGAA
Trigger: CGCTGCCCCAGCCCTACGGCACTCGGGGTCGGGACC...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000503794.5
CDS-3UTR CCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGGGCCCTGGGTTAAACTaGATGATGCGGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMGPGLN*MMRFLM
Trigger: CATCAGGAACCGCATCATCCAGTTTAACCCAGGGCC...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp GGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGGTACTTCTCTGGCCCTaGGTTAAACTGGATGATGCG +
Preference number: 4 (lower is better)
Translates to: GKLIKSGSQLDPLDCALVVLLWP*VKLDDA
Trigger: CGCATCATCCAGTTTAACCCAGGGCCAGAGAAGTAC...CACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAGGTGAAGTACTTCTCTaGCCCTGGGTTAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEGEVLL*PWVKLD
Trigger: ATCCAGTTTAACCCAGGGCCAGAGAAGTACTTCACC...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGCCAGGATGGTATCCATaGCCAGCGTCTTCACACGGG +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGPGWYP*PASSHG
Trigger: CCCGTGTGAAGACGCTGGCCATGGATACCATCCTGG...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTAGACACGGTCCACATGTaGTTCACTCCCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLDTVHM*FTPSSM
Trigger: CATCGAGGAGGGAGTGAACCACATGTGGACCGTGTC...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGGGTTTCTTCGAAGATTaGCTTTTCTCAGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GAGESLRERSLTWLGPLRGFFED*LFSVSF
Trigger: GAAAGAAACTGAGAAAAGCCAATCTTCGAAGAAACC...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGGTTCACCCACTTATCTaGAGTAACCATACTAGATTA +
Preference number: 4 (lower is better)
Translates to: GAGESLRERSLTWLGPLRVHPLI*SNHTRL
Trigger: TAATCTAGTATGGTTACTCCAGATAAGTGGGTGAAC...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACCTTCACTTGGAACAATaGTTCTCAACCAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHLHLEQ*FSTKGQ
Trigger: CTGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAG...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGCTTTGCGAACCCCTCTaGGTCTTCAGTTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKLCEPL*VFSFPQ
Trigger: TTGGGGGAAACTGAAGACCCAGAGGGGTTCGCAAAG...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTATGGGGAGCCCCAGGGTaGAGTACTTCTCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILWGAPG*STSLAL
Trigger: CAGGGCCAGAGAAGTACTTCACCCTGGGGCTCCCCA...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAGTGTGTCATATGTGTaGACCATGGCTGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHSVSYV*TMAEAE
Trigger: TTCTGCTTCAGCCATGGTTCACACATATGACACACT...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGGACACTCAGGAGTTGTaGCTAAACTCACACTTAAGC +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLDTQEL*LNSHLS
Trigger: GCTTAAGTGTGAGTTTAGTCACAACTCCTGAGTGTC...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGAAGGGTTGTATTTCCTaGTGCTCTCAGAACATCAGA +
Preference number: 4 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGKGCIS*CSQNIR
Trigger: TCTGATGTTCTGAGAGCATCAGGAAATACAACCCTT...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp AGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGAGAATTAGCCTGCCAAAACACTGGGCAAGTTaGTCAAGTCAGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RKSAGPIRLCPGVRISLPKHWAS*SSQEVS
Trigger: GCTGACTTCCTGACTTGATCAACTTGCCCAGTGTTT...TGGCAGGCTAATTCTCACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR GCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAACACGGTGCGGGGATaGTGCTGGAAGGCAGACACG +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTNTVRG*CWKADT
Trigger: CGTGTCTGCCTTCCAGCAGCATCCCCGCACCGTGTT...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGACTGACCAAAGAGACTaGTTCCTTGCACTTATTTTA +
Preference number: 4 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLETDQRD*FLALIL
Trigger: TAAAATAAGTGCAAGGAAGCAGTCTCTTTGGTCAGT...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTAACGGCTTCCACCTTCTaGCTTTTGGTGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLTASTF*LLVLES
Trigger: ACTCTCCAGCACCAAAAGGCAGAAGGTGGAAGCCGT...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGTGGGTGTTTTCTGGGTaGATGTCAATGTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLWVFSG*MSMCLK
Trigger: CTTCAAGCACATTGACATCCACCCAGAAAACACCCA...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAATGGGTGTTTTCTGGGTaGATGTCAATGTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEWVFSG*MSMCLK
Trigger: CTTCAAGCACATTGACATCCACCCAGAAAACACCCA...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp ACACTGGGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTTTCAGCTCCAAGGTaGCATCCTCGTCACACACAA +
Preference number: 4 (lower is better)
Translates to: TLGKLIKSGSQLDPLDCALSAPR*HPRHTQ
Trigger: TTGTGTGTGACGAGGATGCCACCTTGGAGCTGAAAG...GGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCCCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACGGGGAGAAGGGTAAATaGGCAAAAGGGTTGTATTTC +
Preference number: 4 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHGEKGK*AKGLYF
Trigger: GAAATACAACCCTTTTGCCCATTTACCCTTCTCCCC...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGAGCAACAGACCACCTTaGGATCCGGGGAGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGSNRPP*DPGRRV
Trigger: TACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCT...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGCTCCTATGTAAAAATTaGGACAATAGTACCTACTTC +
Preference number: 4 (lower is better)
Translates to: GAGESLRERSLTWLGPLRLLCKN*DNSTYF
Trigger: GAAGTAGGTACTATTGTCCCAATTTTTACATAGGAG...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGCAGTTTCTTTCTCTTTaGTACTGTACAAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLQFLSL*YCTRGP
Trigger: TGGACCCCTTGTACAGTATCAAAGAGAAAGAAACTG...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGACGGCTTCCACCTTCTaGCTTTTGGTGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGTASTF*LLVLES
Trigger: ACTCTCCAGCACCAAAAGGCAGAAGGTGGAAGCCGT...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTATTCATCTTGTCCACCTaGAGGACCTCGGTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLFILST*RTSVKG
Trigger: TCCTTTGACCGAGGTCCTGCAGGTGGACAAGATGAA...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500692.6
ENST00000503794.5
CDS-3UTR GCA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAATGGCCCACCTTGCTTTaGGAACCCCTCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKWPTLL*EPLWVF
Trigger: GAAGACCCAGAGGGGTTCGCAAAGCAAGGTGGGCCA...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR CCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGAATGTGGGTGTTTTCTaGGTGGATGTCAATGTGCTT +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLNVGVF*VDVNVL
Trigger: AAGCACATTGACATCCACCCAGAAAACACCCACATT...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACACCAGGATGGTATCCATaGCCAGCGTCTTCACACGGG +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTPGWYP*PASSHG
Trigger: CCCGTGTGAAGACGCTGGCCATGGATACCATCCTGG...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTATCACTCCCTCCTCGATaGCCTTGTACAGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLSLPPR*PCTEQM
Trigger: CATTTGCTCTGTACAAGGCCATCGAGGAGGGAGTGA...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTAAACACTGGGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGGACACGGTCCACATGTaGTTCACTCCCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: LNTGQVDQVRKSAGPIRLDTVHM*FTPSSM
Trigger: CATCGAGGAGGGAGTGAACCACATGTGGACCGTGTC...CAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCCCAGTGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTACTTTCAGCTCCAAGGTaGCATCCTCGTCACACACAA +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLLSAPR*HPRHTQ
Trigger: TTGTGTGTGACGAGGATGCCACCTTGGAGCTGAAAG...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGAGGCTAATCGCTGTATaGTTTCTTCGAAGATTGGCT +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLRLIAV*FLRRLA
Trigger: AGCCAATCTTCGAAGAAACCATACAGCGATTAGCCT...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAGGCTAATCGCTGTATaGTTTCTTCGAAGATTGGCT +
Preference number: 4 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHRLIAV*FLRRLA
Trigger: AGCCAATCTTCGAAGAAACCATACAGCGATTAGCCT...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGCTTCACTTGGAACAATaGTTCTCAACCAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKLHLEQ*FSTKGQ
Trigger: CTGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAG...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGTCCACCAACTTGTTATaGACAAGCATTAAACCTTTG +
Preference number: 4 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGSTNLL*TSIKPL
Trigger: CAAAGGTTTAATGCTTGTTCATAACAAGTTGGTGGA...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGAAGGAGAGAAATTCCTaGCGGGAGTGTGTCATATGT +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKKERNS*RECVIC
Trigger: ACATATGACACACTCCCGTCAGGAATTTCTCTCCTT...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACACGTGGCTGGGCCCCTTaGGGCTCTGGATTTATCAAT +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTRGWAP*GSGFIN
Trigger: ATTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACG...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACACGGTGCGGGGATGCTaGTGGAAGGCAGACACGGTC +
Preference number: 4 (lower is better)
Translates to: QRDCFLALILDIESLCLHTVRGC*WKADTV
Trigger: GACCGTGTCTGCCTTCCAGCAGCATCCCCGCACCGT...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAAAACACGGTGCGGGGATaGTGCTGGAAGGCAGACACG +
Preference number: 4 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKNTVRG*CWKADT
Trigger: CGTGTCTGCCTTCCAGCAGCATCCCCGCACCGTGTT...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACACCTTCTGCCTTTTGGTaGTGGAGAGTCCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTPSAFW*WRVPEG
Trigger: TCCCTCAGGGACTCTCCAGCACCAAAAGGCAGAAGG...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTATGTGGCAGTGTCTGTTaGCCCAGTGGACCTCCCACT +
Preference number: 4 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILCGSVC*PSGPPT
Trigger: AGTGGGAGGTCCACTGGGGCAACAGACACTGCCACA...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGCCTGGGGAGCTGTGTaGTCTCTCTGGACTAGCGGA +
Preference number: 4 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWAWGAV*SLWTSG
Trigger: TCCGCTAGTCCAGAGAGAGCACACAGCTCCCCAGGC...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR CCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGGTACTTCTCTGGCCCTaGGTTAAACTGGATGATGCG +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGVLLWP*VKLDDA
Trigger: CGCATCATCCAGTTTAACCCAGGGCCAGAGAAGTAC...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTAGGTGAAGTACTTCTCTaGCCCTGGGTTAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLGEVLL*PWVKLD
Trigger: ATCCAGTTTAACCCAGGGCCAGAGAAGTACTTCACC...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGAGAATTAGCCTGCCATCTTGGGTGTTTTCTGGGTaGATGTCAATGTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: KSAGPIRLCPGVRISLPSWVFSG*MSMCLK
Trigger: CTTCAAGCACATTGACATCCACCCAGAAAACACCCA...AGATGGCAGGCTAATTCTCACACCAGGGCACAGTCTAATGGGTCCAGCTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACACACCAGACTGGAGCCTaGCTCGTTGAAGGCAATGTG +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTHQTGA*LVEGNV
Trigger: CACATTGCCTTCAACGAGCCAGGCTCCAGTCTGGTG...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAAGACACGGTCCACATGTaGTTCACTCCCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKDTVHM*FTPSSM
Trigger: CATCGAGGAGGGAGTGAACCACATGTGGACCGTGTC...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGCTTTCAGCTCCAAGGTaGCATCCTCGTCACACACAA +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGLSAPR*HPRHTQ
Trigger: TTGTGTGTGACGAGGATGCCACCTTGGAGCTGAAAG...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGGGTTTCTTCGAAGATTaGCTTTTCTCAGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGGFFED*LFSVSF
Trigger: GAAAGAAACTGAGAAAAGCCAATCTTCGAAGAAACC...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAATTAAAACTCCCAACCTaGGTTTGGCAGACATCAAAA +
Preference number: 4 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTELKLPT*VWQTSK
Trigger: TTTTGATGTCTGCCAAACCCAGGTTGGGAGTTTTAA...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTACTTCACTTGGAACAATaGTTCTCAACCAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLLHLEQ*FSTKGQ
Trigger: CTGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAG...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACACCACCTTCTGCCTTTTaGTGCTGGAGAGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTPPSAF*CWRVPE
Trigger: CTCAGGGACTCTCCAGCACCAAAAGGCAGAAGGTGG...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGAGAATTAGCCTGCCACTTCCTGTTGACCTGTaGAGGAGCTTTGAAATACTT +
Preference number: 4 (lower is better)
Translates to: RKSAGPIRLCPGVRISLPLPVDL*RSFEIL
Trigger: AAGTATTTCAAAGCTCCTCCACAGGTCAACAGGAAG...TGGCAGGCTAATTCTCACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp GGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGATTAGCCTGCCATCTTaGCTAAATCCCGAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: GKLIKSGSQLDPLDCALVISLPS*LNPEVC
Trigger: ACAAACTTCGGGATTTAGCCAAGATGGCAGGCTAAT...CACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR TCA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTATGGTGGGCACCTTGGTaGGTTCTCCATCGAAGAACC +
Preference number: 4 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILWWAPW*VLHRRT
Trigger: GGTTCTTCGATGGAGAACTCACCAAGGTGCCCACCA...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTACATTGCACTTGTTACTaGCCAAAGAGACTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLHCTCY*PKRLLP
Trigger: AGGAAGCAGTCTCTTTGGTCAGTAACAAGTGCAATG...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGGAAGGCCTAAGACAATaGAAGGAAGCCAGAGCAACA +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGEGLRQ*KEARAT
Trigger: TGTTGCTCTGGCTTCCTTTCATTGTCTTAGGCCTTC...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGAATCCCGAAGTTTGTTaGGTAGATGTATCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QVDQVRKSAGPIRLCPGVNPEVC*VDVSLP
Trigger: AGGAAGGGATACATCTACTCAACAAACTTCGGGATT...CACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR GCA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGACTGACCAAAGAGACTaGTTCCTTGCACTTATTTTA +
Preference number: 4 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLTDQRD*FLALIL
Trigger: TAAAATAAGTGCAAGGAAGCAGTCTCTTTGGTCAGT...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTAGAGGTCATGGGATCATaGTGGGCCACTAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILEVMGS*WATRAG
Trigger: ACCTGCTCTAGTGGCCCAGCATGATCCCATGACCTC...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR GCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACACCTTCACTTACCACCTaGAGGACCTCGGTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTPSLTT*RTSVKG
Trigger: TCCTTTGACCGAGGTCCTGCAGGTGGTAAGTGAAGG...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR GCA 90 bp TTAAACACTGGGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGGGACCCATTAGACTGTaGCCTGGTGTGAGAATTAGC +
Preference number: 4 (lower is better)
Translates to: LNTGQVDQVRKSAGPIRLGPIRL*PGVRIS
Trigger: GCTAATTCTCACACCAGGGCACAGTCTAATGGGTCC...CAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCCCAGTGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGGGTGAAGTACTTCTCTaGCCCTGGGTTAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGGEVLL*PWVKLD
Trigger: ATCCAGTTTAACCCAGGGCCAGAGAAGTACTTCACC...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAACTTGTAGCAGCCAAGTaGGGTACTCCCAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKLVAAK*GTPSGE
Trigger: CTCCCCACTGGGAGTACCCCACTTGGCTGCTACAAG...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGAATGTGGGTGTTTTCTaGGTGGATGTCAATGTGCTT +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKNVGVF*VDVNVL
Trigger: AAGCACATTGACATCCACCCAGAAAACACCCACATT...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp ACACTGGGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCAATGTGGGTGTTTTCTaGGTGGATGTCAATGTGCTT +
Preference number: 4 (lower is better)
Translates to: TLGKLIKSGSQLDPLDCANVGVF*VDVNVL
Trigger: AAGCACATTGACATCCACCCAGAAAACACCCACATT...GGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCCCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGCCAGGATGGTATCCATaGCCAGCGTCTTCACACGGG +
Preference number: 4 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWPGWYP*PASSHG
Trigger: CCCGTGTGAAGACGCTGGCCATGGATACCATCCTGG...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTAAACACTGGGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTCACTCCCTCCTCGATaGCCTTGTACAGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: LNTGQVDQVRKSAGPIRLSLPPR*PCTEQM
Trigger: CATTTGCTCTGTACAAGGCCATCGAGGAGGGAGTGA...CAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCCCAGTGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGAGGCTAATCGCTGTATaGTTTCTTCGAAGATTGGCT +
Preference number: 4 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMRLIAV*FLRRLA
Trigger: AGCCAATCTTCGAAGAAACCATACAGCGATTAGCCT...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTACCACCTTCTGCCTTTTaGTGCTGGAGAGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILPPSAF*CWRVPE
Trigger: CTCAGGGACTCTCCAGCACCAAAAGGCAGAAGGTGG...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAACCCAGACCGTCCCCTTaGCTGAACACAACACTGAAA +
Preference number: 4 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKPRPSP*LNTTLK
Trigger: TTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGG...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACACCCAGACCGTCCCCTTaGCTGAACACAACACTGAAA +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTPRPSP*LNTTLK
Trigger: TTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGG...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACACGAGGAGGCGCCACTaGGGGCAGATCTGGGTTCTA +
Preference number: 4 (lower is better)
Translates to: QRDCFLALILDIESLCLHTRRRH*GQIWVL
Trigger: TAGAACCCAGATCTGCCCCCAGTGGCGCCTCCTCGT...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR TCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGTGGAGCCTGGCTCGTTaGAGGCAATGTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWWSLAR*RQCVHQ
Trigger: CTGATGGACACATTGCCTTCAACGAGCCAGGCTCCA...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTAAAGGGTTGTATTTCCTaGTGCTCTCAGAACATCAGA +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLKGCIS*CSQNIR
Trigger: TCTGATGTTCTGAGAGCATCAGGAAATACAACCCTT...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGGAGCTTAAAACAGAATaGCGGCACAATCACATAGAA +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKELKTE*RHNHIE
Trigger: TTCTATGTGATTGTGCCGTCATTCTGTTTTAAGCTC...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp ACACTGGGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCTCCTGCTCGGCTTCTTaGAAAACATCATTAAACACT +
Preference number: 4 (lower is better)
Translates to: TLGKLIKSGSQLDPLDCASCSAS*KTSLNT
Trigger: AGTGTTTAATGATGTTTTTCAAGAAGCCGAGCAGGA...GGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR GCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCAACACGGTGCGGGGATaGTGCTGGAAGGCAGACACG +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSNTVRG*CWKADT
Trigger: CGTGTCTGCCTTCCAGCAGCATCCCCGCACCGTGTT...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGGATATTGAGAGTTTGTaGCTTCACTTGGAACAATGG +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKDIESL*LHLEQW
Trigger: CCATTGTTCCAAGTGAAGGCACAAACTCTCAATATC...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAAAACTCACACTTAAGCTaGCTGCCCAGACCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKNSHLS*LPRPSP
Trigger: AGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTT...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACATTCATCTTGTCCACCTaGAGGACCTCGGTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTFILST*RTSVKG
Trigger: TCCTTTGACCGAGGTCCTGCAGGTGGACAAGATGAA...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000500692.6
ENST00000503794.5
CDS-3UTR CCA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTAGGCCCTGGGTTAAACTaGATGATGCGGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILGPGLN*MMRFLM
Trigger: CATCAGGAACCGCATCATCCAGTTTAACCCAGGGCC...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAGTACTTCTCTGGCCCTaGGTTAAACTGGATGATGCG +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTVLLWP*VKLDDA
Trigger: CGCATCATCCAGTTTAACCCAGGGCCAGAGAAGTAC...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAAGTACTTCTCTGGCCCTaGGTTAAACTGGATGATGCG +
Preference number: 4 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKVLLWP*VKLDDA
Trigger: CGCATCATCCAGTTTAACCCAGGGCCAGAGAAGTAC...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTAAACACTGGGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGGGTGAAGTACTTCTCTaGCCCTGGGTTAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: LNTGQVDQVRKSAGPIRLGEVLL*PWVKLD
Trigger: ATCCAGTTTAACCCAGGGCCAGAGAAGTACTTCACC...CAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCCCAGTGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACCTTGTAGCAGCCAAGTaGGGTACTCCCAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QRDCFLALILDIESLCLHLVAAK*GTPSGE
Trigger: CTCCCCACTGGGAGTACCCCACTTGGCTGCTACAAG...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGTGGGTGTTTTCTGGGTaGATGTCAATGTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGWVFSG*MSMCLK
Trigger: CTTCAAGCACATTGACATCCACCCAGAAAACACCCA...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAAGACACGGTCCACATGTaGTTCACTCCCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKDTVHM*FTPSSM
Trigger: CATCGAGGAGGGAGTGAACCACATGTGGACCGTGTC...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACACTTTCAGCTCCAAGGTaGCATCCTCGTCACACACAA +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTLSAPR*HPRHTQ
Trigger: TTGTGTGTGACGAGGATGCCACCTTGGAGCTGAAAG...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTAAGGCTAATCGCTGTATaGTTTCTTCGAAGATTGGCT +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLRLIAV*FLRRLA
Trigger: AGCCAATCTTCGAAGAAACCATACAGCGATTAGCCT...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGCATATGTGTGAACCATaGCTGAAGCAGAACAAAAAG +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKHMCEP*LKQNKK
Trigger: CTTTTTGTTCTGCTTCAGCCATGGTTCACACATATG...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACGAGAGAAGTTTGACGTaGCTGGGCCCCTTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QRDCFLALILDIESLCLHERSLT*LGPLRL
Trigger: GAGCCTCAAGGGGCCCAGCCACGTCAAACTTCTCTC...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGAGCAACAGACCACCTTaGGATCCGGGGAGAAGGGTA +
Preference number: 4 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWSNRPP*DPGRRV
Trigger: TACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCT...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGCATCTTGTCCTGCAGTaGGGGAGAGGGGATGACAGA +
Preference number: 4 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWHLVLQ*GRGDDR
Trigger: TCTGTCATCCCCTCTCCCCCACTGCAGGACAAGATG...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR TCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACTGGTGGGCACCTTGGTaGGTTCTCCATCGAAGAACC +
Preference number: 4 (lower is better)
Translates to: QRDCFLALILDIESLCLHWWAPW*VLHRRT
Trigger: GGTTCTTCGATGGAGAACTCACCAAGGTGCCCACCA...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAACAGAGGAGCCACAGTaGGGCTTTCACAAAAACACA +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTTEEPQ*GFHKNT
Trigger: TGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGT...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAGCAGCATCCACTCCATaGAGGCCTAAGACAATGAAA +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTAASTP*RPKTMK
Trigger: TTTCATTGTCTTAGGCCTTCATGGAGTGGATGCTGC...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAGACCTAAGTTCTCTCTaGGCCGTTTCCTCCTATGTA +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTDLSSL*AVSSYV
Trigger: TACATAGGAGGAAACGGCTCAGAGAGAACTTAGGTC...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGACTGACCAAAGAGACTaGTTCCTTGCACTTATTTTA +
Preference number: 4 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMTDQRD*FLALIL
Trigger: TAAAATAAGTGCAAGGAAGCAGTCTCTTTGGTCAGT...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCTACCATCCAGATAGATaGTCGGCTCAGCCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSYHPDR*SAQPRL
Trigger: GAGGCGGGGCTGAGCCGAGCATCTATCTGGATGGTA...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR CCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGAATGTGGGTGTTTTCTaGGTGGATGTCAATGTGCTT +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGNVGVF*VDVNVL
Trigger: AAGCACATTGACATCCACCCAGAAAACACCCACATT...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCTCTTCACACGGGTCCTaGACACCAGACTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSSSHGS*TPDWSL
Trigger: CAGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAGA...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTATCACTCCCTCCTCGATaGCCTTGTACAGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILSLPPR*PCTEQM
Trigger: CATTTGCTCTGTACAAGGCCATCGAGGAGGGAGTGA...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACGACACGGTCCACATGTaGTTCACTCCCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: QRDCFLALILDIESLCLHDTVHM*FTPSSM
Trigger: CATCGAGGAGGGAGTGAACCACATGTGGACCGTGTC...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGGGTTTCTTCGAAGATTaGCTTTTCTCAGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LEQWFSTKGQACARRTLKGFFED*LFSVSF
Trigger: GAAAGAAACTGAGAAAAGCCAATCTTCGAAGAAACC...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGGTTCACCCACTTATCTaGAGTAACCATACTAGATTA +
Preference number: 4 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMVHPLI*SNHTRL
Trigger: TAATCTAGTATGGTTACTCCAGATAAGTGGGTGAAC...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAAAGTGTGTCATATGTGTaGACCATGGCTGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKSVSYV*TMAEAE
Trigger: TTCTGCTTCAGCCATGGTTCACACATATGACACACT...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAAAAGGAGAGAAATTCCTaGCGGGAGTGTGTCATATGT +
Preference number: 4 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKKERNS*RECVIC
Trigger: ACATATGACACACTCCCGTCAGGAATTTCTCTCCTT...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAACATTGCACTTGTTACTaGCCAAAGAGACTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKHCTCY*PKRLLP
Trigger: AGGAAGCAGTCTCTTTGGTCAGTAACAAGTGCAATG...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCCGTGGCTGGGCCCCTTaGGGCTCTGGATTTATCAAT +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSRGWAP*GSGFIN
Trigger: ATTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACG...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCCAAGGGGCAGGCCTGTaGAAGAAGGACTCTCAAGAC +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSQGAGL*KKDSQD
Trigger: GTCTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTG...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTAGGTTTCTTCGAAGATTaGCTTTTCTCAGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLGFFED*LFSVSF
Trigger: GAAAGAAACTGAGAAAAGCCAATCTTCGAAGAAACC...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAAACCTGCCTTTCCCTATaGGTACTTGACACTAGGTCC +
Preference number: 4 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKTCLSL*VLDTRS
Trigger: GGACCTAGTGTCAAGTACCCATAGGGAAAGGCAGGT...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGTGTCTGTTGCCCCAGTaGACCTCCCACTTACTAATG +
Preference number: 4 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWCLLPQ*TSHLLM
Trigger: CATTAGTAAGTGGGAGGTCCACTGGGGCAACAGACA...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAAGGGGAGAAGGGTAAATaGGCAAAAGGGTTGTATTTC +
Preference number: 4 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKGEKGK*AKGLYF
Trigger: GAAATACAACCCTTTTGCCCATTTACCCTTCTCCCC...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGAAGAGATGGAGGTGGTaGGAGAAGCTTCTCTTACCC +
Preference number: 4 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWKRWRW*EKLLLP
Trigger: GGGTAAGAGAAGCTTCTCCCACCACCTCCATCTCTT...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR TCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGTCCACCAACTTGTTATaGACAAGCATTAAACCTTTG +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGSTNLL*TSIKPL
Trigger: CAAAGGTTTAATGCTTGTTCATAACAAGTTGGTGGA...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACGTACTTCTCTGGCCCTaGGTTAAACTGGATGATGCG +
Preference number: 4 (lower is better)
Translates to: QRDCFLALILDIESLCLHVLLWP*VKLDDA
Trigger: CGCATCATCCAGTTTAACCCAGGGCCAGAGAAGTAC...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAAAATGTGGGTGTTTTCTaGGTGGATGTCAATGTGCTT +
Preference number: 4 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKNVGVF*VDVNVL
Trigger: AAGCACATTGACATCCACCCAGAAAACACCCACATT...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACTCACTCCCTCCTCGATaGCCTTGTACAGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: QRDCFLALILDIESLCLHSLPPR*PCTEQM
Trigger: CATTTGCTCTGTACAAGGCCATCGAGGAGGGAGTGA...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGGTTCACCCACTTATCTaGAGTAACCATACTAGATTA +
Preference number: 4 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGVHPLI*SNHTRL
Trigger: TAATCTAGTATGGTTACTCCAGATAAGTGGGTGAAC...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTAGGGGAGAAGGGTAAATaGGCAAAAGGGTTGTATTTC +
Preference number: 4 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILGEKGK*AKGLYF
Trigger: GAAATACAACCCTTTTGCCCATTTACCCTTCTCCCC...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAAAAGGAGAGAAATTCCTaGCGGGAGTGTGTCATATGT +
Preference number: 4 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKKERNS*RECVIC
Trigger: ACATATGACACACTCCCGTCAGGAATTTCTCTCCTT...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGACACTCAGGAGTTGTaGCTAAACTCACACTTAAGC +
Preference number: 4 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWDTQEL*LNSHLS
Trigger: GCTTAAGTGTGAGTTTAGTCACAACTCCTGAGTGTC...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAAGACACTCAGGAGTTGTaGCTAAACTCACACTTAAGC +
Preference number: 4 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKDTQEL*LNSHLS
Trigger: GCTTAAGTGTGAGTTTAGTCACAACTCCTGAGTGTC...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACGAAGGCCTAAGACAATaGAAGGAAGCCAGAGCAACA +
Preference number: 4 (lower is better)
Translates to: QRDCFLALILDIESLCLHEGLRQ*KEARAT
Trigger: TGTTGCTCTGGCTTCCTTTCATTGTCTTAGGCCTTC...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAGATATTGAGAGTTTGTaGCTTCACTTGGAACAATGG +
Preference number: 4 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTDIESL*LHLEQW
Trigger: CCATTGTTCCAAGTGAAGGCACAAACTCTCAATATC...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAATGGGTGTTTTCTGGGTaGATGTCAATGTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKWVFSG*MSMCLK
Trigger: CTTCAAGCACATTGACATCCACCCAGAAAACACCCA...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAACATATGTGTGAACCATaGCTGAAGCAGAACAAAAAG +
Preference number: 4 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKHMCEP*LKQNKK
Trigger: CTTTTTGTTCTGCTTCAGCCATGGTTCACACATATG...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGGGAGAAGGGTAAATaGGCAAAAGGGTTGTATTTC +
Preference number: 4 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWGEKGK*AKGLYF
Trigger: GAAATACAACCCTTTTGCCCATTTACCCTTCTCCCC...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCGAAGTAGAGAGGTCATaGGATCATGCTGGGCCACTA +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSEVERS*DHAGPL
Trigger: TAGTGGCCCAGCATGATCCCATGACCTCTCTACTTC...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR TCA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAACAGTTTCTTTCTCTTTaGTACTGTACAAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKQFLSL*YCTRGP
Trigger: TGGACCCCTTGTACAGTATCAAAGAGAAAGAAACTG...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGATTTCCAGAAAGACCTaGCTTTCCCTATGGGTACTT +
Preference number: 4 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWISRKT*LSLWVL
Trigger: AAGTACCCATAGGGAAAGGCAGGTCTTTCTGGAAAT...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCGGTGAAGTACTTCTCTaGCCCTGGGTTAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSGEVLL*PWVKLD
Trigger: ATCCAGTTTAACCCAGGGCCAGAGAAGTACTTCACC...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTATTAAAACTCCCAACCTaGGTTTGGCAGACATCAAAA +
Preference number: 4 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILLKLPT*VWQTSK
Trigger: TTTTGATGTCTGCCAAACCCAGGTTGGGAGTTTTAA...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCCTTCACTTGGAACAATaGTTCTCAACCAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSLHLEQ*FSTKGQ
Trigger: CTGCCCCTTGGTTGAGAACCATTGTTCCAAGTGAAG...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCCATTGCACTTGTTACTaGCCAAAGAGACTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSHCTCY*PKRLLP
Trigger: AGGAAGCAGTCTCTTTGGTCAGTAACAAGTGCAATG...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACAAGGGTTGTATTTCCTaGTGCTCTCAGAACATCAGA +
Preference number: 4 (lower is better)
Translates to: QRDCFLALILDIESLCLHKGCIS*CSQNIR
Trigger: TCTGATGTTCTGAGAGCATCAGGAAATACAACCCTT...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACATTTCCAGAAAGACCTaGCTTTCCCTATGGGTACTT +
Preference number: 4 (lower is better)
Translates to: QRDCFLALILDIESLCLHISRKT*LSLWVL
Trigger: AAGTACCCATAGGGAAAGGCAGGTCTTTCTGGAAAT...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAAGATATTGAGAGTTTGTaGCTTCACTTGGAACAATGG +
Preference number: 4 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKDIESL*LHLEQW
Trigger: CCATTGTTCCAAGTGAAGGCACAAACTCTCAATATC...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGATATTGAGAGTTTGTaGCTTCACTTGGAACAATGG +
Preference number: 4 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWDIESL*LHLEQW
Trigger: CCATTGTTCCAAGTGAAGGCACAAACTCTCAATATC...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR GCA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTAACTGACCAAAGAGACTaGTTCCTTGCACTTATTTTA +
Preference number: 4 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILTDQRD*FLALIL
Trigger: TAAAATAAGTGCAAGGAAGCAGTCTCTTTGGTCAGT...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGTTAAAACTCCCAACCTaGGTTTGGCAGACATCAAAA +
Preference number: 4 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWLKLPT*VWQTSK
Trigger: TTTTGATGTCTGCCAAACCCAGGTTGGGAGTTTTAA...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAACATATGTGTGAACCATaGCTGAAGCAGAACAAAAAG +
Preference number: 4 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKHMCEP*LKQNKK
Trigger: CTTTTTGTTCTGCTTCAGCCATGGTTCACACATATG...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAACTCCTATGTAAAAATTaGGACAATAGTACCTACTTC +
Preference number: 4 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKLLCKN*DNSTYF
Trigger: GAAGTAGGTACTATTGTCCCAATTTTTACATAGGAG...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503794.5
ENST00000508177.5
3UTR CAA 72 bp GACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTaGTGCCTTCACTTGGAACAATGGTTCTCAACCAAG +
Preference number: 4 (lower is better)
Translates to: DCFLALILDIES*CLHLEQWFSTK
Trigger: CTTGGTTGAGAACCATTGTTCCAAGTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCCAGTTTCTTTCTCTTTaGTACTGTACAAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSQFLSL*YCTRGP
Trigger: TGGACCCCTTGTACAGTATCAAAGAGAAAGAAACTG...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACGAGCTTAAAACAGAATaGCGGCACAATCACATAGAA +
Preference number: 4 (lower is better)
Translates to: QRDCFLALILDIESLCLHELKTE*RHNHIE
Trigger: TTCTATGTGATTGTGCCGTCATTCTGTTTTAAGCTC...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CCA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAAGTTCACCCACTTATCTaGAGTAACCATACTAGATTA +
Preference number: 4 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKVHPLI*SNHTRL
Trigger: TAATCTAGTATGGTTACTCCAGATAAGTGGGTGAAC...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCGAGCTTAAAACAGAATaGCGGCACAATCACATAGAA +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSELKTE*RHNHIE
Trigger: TTCTATGTGATTGTGCCGTCATTCTGTTTTAAGCTC...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR TCA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCTCCACCAACTTGTTATaGACAAGCATTAAACCTTTG +
Preference number: 4 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSSTNLL*TSIKPL
Trigger: CAAAGGTTTAATGCTTGTTCATAACAAGTTGGTGGA...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS TCA 90 bp TCTTGTCCACCTGCAGGACCTCGGTCAAAGGACCTAAGTTCTCTCTaGGCCGTTTCCTCACGGACGCCTCCCGCGGCGGCTGCAGCGACT +
Preference number: 5 (lower is better)
Translates to: SCPPAGPRSKDLSSL*AVSSRTPPAAAAAT
Trigger: AGTCGCTGCAGCCGCCGCGGGAGGCGTCCGTGAGGAAACGGCTCAGAGAGAACTTAGGTCCTTTGACCGAGGTCCTGCAGGTGGACAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500692.6
CDS-3UTR CAA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGCTGAGGGAGAGAAGTTaGACGTGGCTGGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: GAGESLRERSLTWLGPLRLRERS*TWLGPL
Trigger: CAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAG...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS TCA 90 bp GAGAGGTCATGGGATCATGCTGGGCCACTAGAGCAGGTGGGGCAATaGGCTCTGCCTGGGGAGCTGTGTGCTCTCTCTGGACTAGCGGAG +
Preference number: 5 (lower is better)
Translates to: ERSWDHAGPLEQVGQ*ALPGELCALSGLAE
Trigger: CTCCGCTAGTCCAGAGAGAGCACACAGCTCCCCAGGCAGAGCTCATTGCCCCACCTGCTCTAGTGGCCCAGCATGATCCCATGACCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS CCA 90 bp CATGGCCAGCGTCTTCACACGGGTCCTGGACACCAGACTGGAGCCTaGCTCGTTGAAGGCAATGTGTCCATCAGGGCCGATGCCTCCAAC +
Preference number: 5 (lower is better)
Translates to: HGQRLHTGPGHQTGA*LVEGNVSIRADASN
Trigger: GTTGGAGGCATCGGCCCTGATGGACACATTGCCTTCAACGAGCCAGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAGACGCTGGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000504139.5
ENST00000505689.5
ENST00000507559.1
ENST00000508177.5
ENST00000513454.5
CDS CCA 90 bp GGATCATGCTGGGCCACTAGAGCAGGTGGGGCAATGAGCTCTGCCTaGGGAGCTGTGTGCTCTCTCTGGACTAGCGGAGGGGTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: GSCWATRAGGAMSSA*GAVCSLWTSGGVFL
Trigger: TAGGAAGACCCCTCCGCTAGTCCAGAGAGAGCACACAGCTCCCCAGGCAGAGCTCATTGCCCCACCTGCTCTAGTGGCCCAGCATGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR CAA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGGCCATGGTGGGCACCTaGGTGAGTTCTCCATCGAAG +
Preference number: 5 (lower is better)
Translates to: GAGESLRERSLTWLGPLRAMVGT*VSSPSK
Trigger: CTTCGATGGAGAACTCACCAAGGTGCCCACCATGGC...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGGCCCAGACCGTCCCCTaGGCTGAACACAACACTGAA +
Preference number: 5 (lower is better)
Translates to: GAGESLRERSLTWLGPLRAQTVP*AEHNTE
Trigger: TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGC...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS CCA 90 bp CATGGCCAGCGTCTTCACACGGGTCCTGGACACCAGACTGGAGCCTaGCTCGTTGAAGGCAATGTGTCCATCAGGGCCGATGCCTATAGG +
Preference number: 5 (lower is better)
Translates to: HGQRLHTGPGHQTGA*LVEGNVSIRADAYR
Trigger: CCTATAGGCATCGGCCCTGATGGACACATTGCCTTCAACGAGCCAGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAGACGCTGGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515747.1
CDS-3UTR CAA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGCTGGAGCCTGGCTCGTaGAAGGCAATGTGTCCATCA +
Preference number: 5 (lower is better)
Translates to: GAGESLRERSLTWLGPLRLEPGS*KAMCPS
Trigger: TGATGGACACATTGCCTTCAACGAGCCAGGCTCCAG...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGCCATGGTGGGCACCTaGGTGAGTTCTCCATCGAAG +
Preference number: 5 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLEAMVGT*VSSPSK
Trigger: CTTCGATGGAGAACTCACCAAGGTGCCCACCATGGC...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS CCA 90 bp GTGGGGAGCCCCAGGGTGAAGTACTTCTCTGGCCCTGGGTTAAACTaGATGATGCGGTTCCTGATGTATTTAGCCGCCCACTCGCTCGCC +
Preference number: 5 (lower is better)
Translates to: VGSPRVKYFSGPGLN*MMRFLMYLAAHSLA
Trigger: GGCGAGCGAGTGGGCGGCTAAATACATCAGGAACCGCATCATCCAGTTTAACCCAGGGCCAGAGAAGTACTTCACCCTGGGGCTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503229.5
ENST00000503794.5
ENST00000504139.5
ENST00000505689.5
ENST00000507107.1
ENST00000508177.5
ENST00000510194.5
ENST00000513454.5
CDS-3UTR CAA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGCTGGAGCCTGGCTCGTaGAAGGCAATGTGTCCATCA +
Preference number: 5 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLELEPGS*KAMCPS
Trigger: TGATGGACACATTGCCTTCAACGAGCCAGGCTCCAG...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGGAGCAACAGACCACCTaGGGATCCGGGGAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGEQQTT*GSGEKG
Trigger: ACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTC...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGCTTCACAGACTTGCTTaGCGAACCCCTCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: GAGESLRERSLTWLGPLRLHRLA*RTPLGL
Trigger: AAGACCCAGAGGGGTTCGCAAAGCAAGTCTGTGAAG...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503794.5
CDS TCA 90 bp GCGTCTTCACACGGGTCCTGGACACCAGACTGGAGCCTGGCTCGTTaGAGGCAATGTGTCCATCAGGGCCGATGCCTCCAACAAATAGCT +
Preference number: 5 (lower is better)
Translates to: ASSHGSWTPDWSLAR*RQCVHQGRCLQQIA
Trigger: AGCTATTTGTTGGAGGCATCGGCCCTGATGGACACATTGCCTTCAACGAGCCAGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000504139.5
ENST00000505689.5
ENST00000507559.1
ENST00000508177.5
ENST00000513454.5
CDS CCA 90 bp CTGTCTGCAGACAGGCATTGTGTCTTGTCCTCCTTCCCACGGGTCTaGCCCTGGACATGTGTGCTGCAGAGTGTCAAGCTCACCTCCAAC +
Preference number: 5 (lower is better)
Translates to: LSADRHCVLSSFPRV*PWTCVLQSVKLTSN
Trigger: GTTGGAGGTGAGCTTGACACTCTGCAGCACACATGTCCAGGGCCAGACCCGTGGGAAGGAGGACAAGACACAATGCCTGTCTGCAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507107.1
CDS-3UTR CAA 90 bp GGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGGTTTCCCTATGGGTACTaGACACTAGGTCCCAGCACA +
Preference number: 5 (lower is better)
Translates to: GAGESLRERSLTWLGPLRFPYGY*TLGPST
Trigger: TGTGCTGGGACCTAGTGTCAAGTACCCATAGGGAAA...CCTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACGAGCAACAGACCACCTaGGGATCCGGGGAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHEQQTT*GSGEKG
Trigger: ACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTC...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGACGTGGCTGGGCCCCTaGAGGCTCTGGATTTATCAA +
Preference number: 5 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGTWLGP*RLWIYQ
Trigger: TTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACGT...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGCAGAAGGAGGACATTTaGTTCCCCCAGCACTGCGGT +
Preference number: 5 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLQKEDI*FPQHCG
Trigger: ACCGCAGTGCTGGGGGAACAAAATGTCCTCCTTCTG...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503794.5
ENST00000508177.5
CDS TCA 90 bp TCTTGTCCACCTGCAGGACCTCGGTCAAAGGACCTAAGTTCTCTCTaGGCCGTTTCCTCCTTGCTTTGCGAACCCCTCTGGGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: SCPPAGPRSKDLSSL*AVSSLLCEPLWVFS
Trigger: ACTGAAGACCCAGAGGGGTTCGCAAAGCAAGGAGGAAACGGCTCAGAGAGAACTTAGGTCCTTTGACCGAGGTCCTGCAGGTGGACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504424.1
CDS-3UTR CAA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGTCGAAGAACCTAGCATaGGCCAGGATGGTATCCATG +
Preference number: 5 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGSKNLA*ARMVSM
Trigger: CATGGATACCATCCTGGCCAATGCTAGGTTCTTCGA...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGGCCATGGTGGGCACCTaGGTGAGTTCTCCATCGAAG +
Preference number: 5 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMAMVGT*VSSPSK
Trigger: CTTCGATGGAGAACTCACCAAGGTGCCCACCATGGC...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGAGAATTAGCCTGCCATCTGCCATGGTGGGCACCTaGGTGAGTTCTCCATCGAAG +
Preference number: 5 (lower is better)
Translates to: KSAGPIRLCPGVRISLPSAMVGT*VSSPSK
Trigger: CTTCGATGGAGAACTCACCAAGGTGCCCACCATGGC...AGATGGCAGGCTAATTCTCACACCAGGGCACAGTCTAATGGGTCCAGCTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CAA 90 bp GGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGCCCTCCTCGATGGCCTaGTACAGAGCAAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: GKLIKSGSQLDPLDCALVPSSMA*YRANAL
Trigger: CAAGGCATTTGCTCTGTACAAGGCCATCGAGGAGGG...CACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CAA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGTTTCCCTATGGGTACTaGACACTAGGTCCCAGCACA +
Preference number: 5 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGFPYGY*TLGPST
Trigger: TGTGCTGGGACCTAGTGTCAAGTACCCATAGGGAAA...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTACTGAGGGAGAGAAGTTaGACGTGGCTGGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLLRERS*TWLGPL
Trigger: CAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAG...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGATGATGAGCTTCATCTaGTCCTGCAGTGGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLMMSFI*SCSGGE
Trigger: CTCTCCCCCACTGCAGGACAAGATGAAGCTCATCAT...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS GCA 90 bp TGGGGGCAGATCTGGGTTCTAATCTCAGCTCCTTCACTTACCACCTaGAGGACCTCGGTCAAAGGACCTAAGTTCTCTCTGAGCCGTTTC +
Preference number: 5 (lower is better)
Translates to: WGQIWVLISAPSLTT*RTSVKGPKFSLSRF
Trigger: GAAACGGCTCAGAGAGAACTTAGGTCCTTTGACCGAGGTCCTGCAGGTGGTAAGTGAAGGAGCTGAGATTAGAACCCAGATCTGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS CCA 90 bp ATCCAAGAACGCACCAGTGGGGAGCCCCAGGGTGAAGTACTTCTCTaGCCCTGGGTTAAACTGGATGATGCGGTTCCTGATGTATTTAGC +
Preference number: 5 (lower is better)
Translates to: IQERTSGEPQGEVLL*PWVKLDDAVPDVFS
Trigger: GCTAAATACATCAGGAACCGCATCATCCAGTTTAACCCAGGGCCAGAGAAGTACTTCACCCTGGGGCTCCCCACTGGTGCGTTCTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505689.5
CDS-3UTR CAA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATCCCACCTGCAGCCTaGATCTTCTCTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEIPPAA*IFSSKA
Trigger: TGCCTTTGAAGAGAAGATCAAGGCTGCAGGTGGGAT...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGCTGGAGCCTGGCTCGTaGAAGGCAATGTGTCCATCA +
Preference number: 5 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMLEPGS*KAMCPS
Trigger: TGATGGACACATTGCCTTCAACGAGCCAGGCTCCAG...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGCTGGAGCCTGGCTCGTaGAAGGCAATGTGTCCATCA +
Preference number: 5 (lower is better)
Translates to: QVDQVRKSAGPIRLCPGVLEPGS*KAMCPS
Trigger: TGATGGACACATTGCCTTCAACGAGCCAGGCTCCAG...CACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CAA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAATCGAAGAACCTAGCATaGGCCAGGATGGTATCCATG +
Preference number: 5 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTESKNLA*ARMVSM
Trigger: CATGGATACCATCCTGGCCAATGCTAGGTTCTTCGA...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGCCCTCCTCGATGGCCTaGTACAGAGCAAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: LEQWFSTKGQACARRTLKPSSMA*YRANAL
Trigger: CAAGGCATTTGCTCTGTACAAGGCCATCGAGGAGGG...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TGGTGCTGGAGAGTCCCTGAGGGAGAGAAGTTTGACGTGGCTGGGCCCCTTGAGTCAGTTTCTTTCTCTTaGATACTGTACAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: WCWRVPEGEKFDVAGPLESVSFS*ILYKGS
Trigger: GGACCCCTTGTACAGTATCAAAGAGAAAGAAACTGA...CTCAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAGGGACTCTCCAGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGACTCCCAACCTGGGTTaGGCAGACATCAAAATGATG +
Preference number: 5 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGTPNLG*ADIKMM
Trigger: CATCATTTTGATGTCTGCCAAACCCAGGTTGGGAGT...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGGAGCAACAGACCACCTaGGGATCCGGGGAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGEQQTT*GSGEKG
Trigger: ACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTC...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGATGTGCTTGAAGAAGTaGTTCCACATGAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGMCLKK*FHMKEW
Trigger: CCACTCCTTCATGTGGAACAACTTCTTCAAGCACAT...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGAGAATTAGCCTGCCATCGAAGAACCTAGCATaGGCCAGGATGGTATCCATG +
Preference number: 5 (lower is better)
Translates to: RKSAGPIRLCPGVRISLPSKNLA*ARMVSM
Trigger: CATGGATACCATCCTGGCCAATGCTAGGTTCTTCGA...TGGCAGGCTAATTCTCACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CAA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACAACACTGAAATaGTGGCAGTGTCTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHNTTLK*WQCLLP
Trigger: GGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGGCCCAGACCGTCCCCTaGGCTGAACACAACACTGAA +
Preference number: 5 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGAQTVP*AEHNTE
Trigger: TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGC...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS GCA 90 bp GGGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTaGCCTGGTGTGAGAATTAGCCTGCCATCTTGGCTAAATCCCGAA +
Preference number: 5 (lower is better)
Translates to: GQVDQVRKSAGPIRL*PGVRISLPSWLNPE
Trigger: TTCGGGATTTAGCCAAGATGGCAGGCTAATTCTCACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CAA 90 bp CTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATGTGCTTGAAGAAGTaGTTCCACATGAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: LTLKLPAQTVPLAEHNTEMCLKK*FHMKEW
Trigger: CCACTCCTTCATGTGGAACAACTTCTTCAAGCACAT...TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGATCCCACCTGCAGCCTaGATCTTCTCTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: QVDQVRKSAGPIRLCPGVIPPAA*IFSSKA
Trigger: TGCCTTTGAAGAGAAGATCAAGGCTGCAGGTGGGAT...CACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CAA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGTCGAAGAACCTAGCATaGGCCAGGATGGTATCCATG +
Preference number: 5 (lower is better)
Translates to: LEQWFSTKGQACARRTLKSKNLA*ARMVSM
Trigger: CATGGATACCATCCTGGCCAATGCTAGGTTCTTCGA...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CCAGAGCAACAGACCACCTTGGGATCCGGGGAGAAGGGTAAATGGGCAAAAGGGTCAGTTTCTTTCTCTTaGATACTGTACAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PEQQTTLGSGEKGKWAKGSVSFS*ILYKGS
Trigger: GGACCCCTTGTACAGTATCAAAGAGAAAGAAACTGA...CCCTTTTGCCCATTTACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAACTGAGGGAGAGAAGTTaGACGTGGCTGGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKLRERS*TWLGPL
Trigger: CAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAG...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp ACACTGGGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCATGTATCCCTTCCTGTaGACCTGTGGAGGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: TLGKLIKSGSQLDPLDCAMYPFL*TCGGAL
Trigger: CAAAGCTCCTCCACAGGTCAACAGGAAGGGATACAT...GGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCCCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CAA 90 bp GTGACTAAACTCACACTTAAGCTGCCTGCCCAGACCGTCCCCTTGGCTGAACACTGGATGTCAATGTGCTaGAAGAAGTTGTTCCACATG +
Preference number: 5 (lower is better)
Translates to: VTKLTLKLPAQTVPLAEHWMSMC*KKLFHM
Trigger: CATGTGGAACAACTTCTTCAAGCACATTGACATCCA...GTGTTCAGCCAAGGGGACGGTCTGGGCAGGCAGCTTAAGTGTGAGTTTAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CTGCCCAGACCGTCCCCTTGGCTGAACACAACACTGAAATTGTGGCAGTGTCTGTCAGTTTCTTTCTCTTaGATACTGTACAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LPRPSPWLNTTLKLWQCLSVSFS*ILYKGS
Trigger: GGACCCCTTGTACAGTATCAAAGAGAAAGAAACTGA...CAGACACTGCCACAATTTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGATGTGCTTGAAGAAGTaGTTCCACATGAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: LEQWFSTKGQACARRTLKMCLKK*FHMKEW
Trigger: CCACTCCTTCATGTGGAACAACTTCTTCAAGCACAT...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGATGTGCTTGAAGAAGTaGTTCCACATGAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: QVDQVRKSAGPIRLCPGVMCLKK*FHMKEW
Trigger: CCACTCCTTCATGTGGAACAACTTCTTCAAGCACAT...CACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CAA 90 bp AGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGAGAATTAGCCTGCCATGGATGTCAATGTGCTaGAAGAAGTTGTTCCACATG +
Preference number: 5 (lower is better)
Translates to: RKSAGPIRLCPGVRISLPWMSMC*KKLFHM
Trigger: CATGTGGAACAACTTCTTCAAGCACATTGACATCCA...TGGCAGGCTAATTCTCACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CAA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTAGCCATGGTGGGCACCTaGGTGAGTTCTCCATCGAAG +
Preference number: 5 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILAMVGT*VSSPSK
Trigger: CTTCGATGGAGAACTCACCAAGGTGCCCACCATGGC...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAAACGTGGCTGGGCCCCTaGAGGCTCTGGATTTATCAA +
Preference number: 5 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKTWLGP*RLWIYQ
Trigger: TTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACGT...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AACACAACACTGAAATTGTGGCAGTGTCTGTTGCCCCAGTGGACCTCCCACTTAAACACAACACTGAAATaGTGGCAGTGTCTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: NTTLKLWQCLLPQWTSHLNTTLK*WQCLLP
Trigger: GGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT...TAAGTGGGAGGTCCACTGGGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGCTGGCCCACCTTGCTTaGCGAACCCCTCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWLAHLA*RTPLGL
Trigger: AAGACCCAGAGGGGTTCGCAAAGCAAGGTGGGCCAG...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR CAA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAATCCTACTGGCCCACCTaGCTTTGCGAACCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKSYWPT*LCEPLW
Trigger: CCAGAGGGGTTCGCAAAGCAAGGTGGGCCAGTAGGA...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR CAA 90 bp AGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGAGAATTAGCCTGCCAGCTAAATCCCGAAGTTaGTTGAGTAGATGTATCCCT +
Preference number: 5 (lower is better)
Translates to: RKSAGPIRLCPGVRISLPAKSRS*LSRCIP
Trigger: AGGGATACATCTACTCAACAAACTTCGGGATTTAGC...TGGCAGGCTAATTCTCACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS TCA 90 bp TCACCTTTCTCATTTGCAGCCCTGGGCAGGTACACCTTAAACATGTaGTCTGTCCCCCTCCCTACCATTTCTTTCTCTTTGCCATACTGT +
Preference number: 5 (lower is better)
Translates to: SPFSFAALGRYTLNM*SVPLPTISFSLPYC
Trigger: ACAGTATGGCAAAGAGAAAGAAATGGTAGGGAGGGGGACAGATCACATGTTTAAGGTGTACCTGCCCAGGGCTGCAAATGAGAAAGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515747.1
CDS CCA 90 bp TGTAGGTCGACTGCATTCCCATCCAGAATGTGGGTGTTTTCTGGGTaGATGTCAATGTGCTTGAAGAAGTTGTTCCACATGAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: CRSTAFPSRMWVFSG*MSMCLKKLFHMKEW
Trigger: CCACTCCTTCATGTGGAACAACTTCTTCAAGCACATTGACATCCACCCAGAAAACACCCACATTCTGGATGGGAATGCAGTCGACCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503229.5
ENST00000503794.5
ENST00000504139.5
ENST00000505689.5
ENST00000507107.1
ENST00000507559.1
ENST00000508177.5
ENST00000510194.5
ENST00000513454.5
CDS-3UTR CAA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGTGGATGTCAATGTGCTaGAAGAAGTTGTTCCACATG +
Preference number: 5 (lower is better)
Translates to: LEQWFSTKGQACARRTLKWMSMC*KKLFHM
Trigger: CATGTGGAACAACTTCTTCAAGCACATTGACATCCA...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTACTGGAGCCTGGCTCGTaGAAGGCAATGTGTCCATCA +
Preference number: 5 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILLEPGS*KAMCPS
Trigger: TGATGGACACATTGCCTTCAACGAGCCAGGCTCCAG...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGTCAGTTTCTTTCTCTTaGATACTGTACAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMSVSFS*ILYKGS
Trigger: GGACCCCTTGTACAGTATCAAAGAGAAAGAAACTGA...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTAACGTGGCTGGGCCCCTaGAGGCTCTGGATTTATCAA +
Preference number: 5 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILTWLGP*RLWIYQ
Trigger: TTGATAAATCCAGAGCCTCAAGGGGCCCAGCCACGT...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACCTGAGGGAGAGAAGTTaGACGTGGCTGGGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: QRDCFLALILDIESLCLHLRERS*TWLGPL
Trigger: CAAGGGGCCCAGCCACGTCAAACTTCTCTCCCTCAG...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGAACACAACACTGAAATaGTGGCAGTGTCTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGNTTLK*WQCLLP
Trigger: GGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTACAGAAGGAGGACATTTaGTTCCCCCAGCACTGCGGT +
Preference number: 5 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILQKEDI*FPQHCG
Trigger: ACCGCAGTGCTGGGGGAACAAAATGTCCTCCTTCTG...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAAACCTACTTCACAGACTaGCTTTGCGAACCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKTYFTD*LCEPLW
Trigger: CCAGAGGGGTTCGCAAAGCAAGTCTGTGAAGTAGGT...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503794.5
CDS-3UTR CAA 90 bp CAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGGGAGCTTTGAAATACTaGACAGTCTTCACTTTCAGC +
Preference number: 5 (lower is better)
Translates to: QVDQVRKSAGPIRLCPGVGALKY*TVFTFS
Trigger: GCTGAAAGTGAAGACTGTCAAGTATTTCAAAGCTCC...CACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CAA 90 bp CAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTGCCCTGGTGTGAAATCCCGAAGTTTGTaGAGTAGATGTATCCCTTCC +
Preference number: 5 (lower is better)
Translates to: QVDQVRKSAGPIRLCPGVKSRSL*SRCIPS
Trigger: GGAAGGGATACATCTACTCAACAAACTTCGGGATTT...CACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS TCA 90 bp TCTTGTCCACCTGCAGGACCTCGGTCAAAGGACCTAAGTTCTCTCTaGGCCGTTTCCTCCTATGTAAAAATTGGGACAATAGTACCTACT +
Preference number: 5 (lower is better)
Translates to: SCPPAGPRSKDLSSL*AVSSYVKIGTIVPT
Trigger: AGTAGGTACTATTGTCCCAATTTTTACATAGGAGGAAACGGCTCAGAGAGAACTTAGGTCCTTTGACCGAGGTCCTGCAGGTGGACAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503229.5
ENST00000503794.5
CDS TCA 90 bp CACTTACCACCTGCAGGACCTCGGTCAAAGGACCTAAGTTCTCTCTaGGCCGTTTCCTCCTATGTAAAAATTGGGACAATAGTACCTACT +
Preference number: 5 (lower is better)
Translates to: HLPPAGPRSKDLSSL*AVSSYVKIGTIVPT
Trigger: AGTAGGTACTATTGTCCCAATTTTTACATAGGAGGAAACGGCTCAGAGAGAACTTAGGTCCTTTGACCGAGGTCCTGCAGGTGGTAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS TCA 90 bp GGTGTGAGAATTAGCCTGCCATCTTGGCTAAATCCCGAAGTTTGTTaGGTAGATGTATCCCTTCCTGTTGACCTGTGGAGGAGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: GVRISLPSWLNPEVC*VDVSLPVDLWRSFE
Trigger: TTCAAAGCTCCTCCACAGGTCAACAGGAAGGGATACATCTACTCAACAAACTTCGGGATTTAGCCAAGATGGCAGGCTAATTCTCACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CAA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAAATCCCACCTGCAGCCTaGATCTTCTCTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKIPPAA*IFSSKA
Trigger: TGCCTTTGAAGAGAAGATCAAGGCTGCAGGTGGGAT...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGCCCTCCTCGATGGCCTaGTACAGAGCAAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWPSSMA*YRANAL
Trigger: CAAGGCATTTGCTCTGTACAAGGCCATCGAGGAGGG...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAACCCTCCTCGATGGCCTaGTACAGAGCAAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKPSSMA*YRANAL
Trigger: CAAGGCATTTGCTCTGTACAAGGCCATCGAGGAGGG...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CTCCCACTTACTAATGAGTATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACATTTCCCTATGGGTACTaGACACTAGGTCCCAGCACA +
Preference number: 5 (lower is better)
Translates to: LPLTNEYVKQRSHSEAFTFPYGY*TLGPST
Trigger: TGTGCTGGGACCTAGTGTCAAGTACCCATAGGGAAA...TGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATACTCATTAGTAAGTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACGCCCAGACCGTCCCCTaGGCTGAACACAACACTGAA +
Preference number: 5 (lower is better)
Translates to: QRDCFLALILDIESLCLHAQTVP*AEHNTE
Trigger: TTCAGTGTTGTGTTCAGCCAAGGGGACGGTCTGGGC...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCGAGCAACAGACCACCTaGGGATCCGGGGAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSEQQTT*GSGEKG
Trigger: ACCCTTCTCCCCGGATCCCAAGGTGGTCTGTTGCTC...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS CCA 90 bp TTCTTTCTTCTAAAGACAATTTCCAGAAAGACCTGCCTTTCCCTATaGGTACTTGACACTAGGTCCCAGCACAGGCTAATCGCTGTATGG +
Preference number: 5 (lower is better)
Translates to: FFLLKTISRKTCLSL*VLDTRSQHRLIAVW
Trigger: CCATACAGCGATTAGCCTGTGCTGGGACCTAGTGTCAAGTACCCATAGGGAAAGGCAGGTCTTTCTGGAAATTGTCTTTAGAAGAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGTGGATGTCAATGTGCTaGAAGAAGTTGTTCCACATG +
Preference number: 5 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGWMSMC*KKLFHM
Trigger: CATGTGGAACAACTTCTTCAAGCACATTGACATCCA...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TTGGAACAATGGTTCTCAACCAAGGGGCAGGCCTGTGCAAGAAGGACTCTCAAGTGGTTTCTTCGAAGATaGGCTTTTCTCAGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LEQWFSTKGQACARRTLKWFLRR*AFLSFF
Trigger: AAAGAAACTGAGAAAAGCCAATCTTCGAAGAAACCA...CTTGAGAGTCCTTCTTGCACAGGCCTGCCCCTTGGTTGAGAACCATTGTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAAACTCCCAACCTGGGTTaGGCAGACATCAAAATGATG +
Preference number: 5 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKTPNLG*ADIKMM
Trigger: CATCATTTTGATGTCTGCCAAACCCAGGTTGGGAGT...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CCAAACATAGCCCTTAGGCCTGGGCTAGGCTCTCAAAGGTCTTTCCCAGAAATGTTAGATATTGAGAGTTaGTGCCTTCACTTGGAACAA +
Preference number: 5 (lower is better)
Translates to: PNIALRPGLGSQRSFPEMLDIES*CLHLEQ
Trigger: TTGTTCCAAGTGAAGGCACAAACTCTCAATATCTAA...CATTTCTGGGAAAGACCTTTGAGAGCCTAGCCCAGGCCTAAGGGCTATGTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TTAAACACTGGGCAAGTTGATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGACCTGTGGAGGAGCTTaGAAATACTTGACAGTCTTC +
Preference number: 5 (lower is better)
Translates to: LNTGQVDQVRKSAGPIRLTCGGA*KYLTVF
Trigger: GAAGACTGTCAAGTATTTCAAAGCTCCTCCACAGGT...CAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATCAACTTGCCCAGTGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS-3UTR CAA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAAATCCCACCTGCAGCCTaGATCTTCTCTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKIPPAA*IFSSKA
Trigger: TGCCTTTGAAGAGAAGATCAAGGCTGCAGGTGGGAT...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCCCCTCCTCGATGGCCTaGTACAGAGCAAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSPSSMA*YRANAL
Trigger: CAAGGCATTTGCTCTGTACAAGGCCATCGAGGAGGG...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGTTTCCCTATGGGTACTaGACACTAGGTCCCAGCACA +
Preference number: 5 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWFPYGY*TLGPST
Trigger: TGTGCTGGGACCTAGTGTCAAGTACCCATAGGGAAA...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACTCGAAGAACCTAGCATaGGCCAGGATGGTATCCATG +
Preference number: 5 (lower is better)
Translates to: QRDCFLALILDIESLCLHSKNLA*ARMVSM
Trigger: CATGGATACCATCCTGGCCAATGCTAGGTTCTTCGA...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TATGTAAAACAGAGGAGCCACAGTGAGGCTTTCACAAAAACACAGGGCTCTGGGTGGTTTCTTCGAAGATaGGCTTTTCTCAGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: YVKQRSHSEAFTKTQGSGWFLRR*AFLSFF
Trigger: AAAGAAACTGAGAAAAGCCAATCTTCGAAGAAACCA...CCCAGAGCCCTGTGTTTTTGTGAAAGCCTCACTGTGGCTCCTCTGTTTTACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAAACTCCCAACCTGGGTTaGGCAGACATCAAAATGATG +
Preference number: 5 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKTPNLG*ADIKMM
Trigger: CATCATTTTGATGTCTGCCAAACCCAGGTTGGGAGT...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AAATTCCTGACGGGAGTGTGTCATATGTGTGAACCATGGCTGAAGCAGAACAAAAAATGGGCAAAAGGGTaGTATTTCCTGATGCTCTCA +
Preference number: 5 (lower is better)
Translates to: KFLTGVCHMCEPWLKQNKKWAKG*YFLMLS
Trigger: TGAGAGCATCAGGAAATACAACCCTTTTGCCCATTT...TTTGTTCTGCTTCAGCCATGGTTCACACATATGACACACTCCCGTCAGGAATTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAAATGTGCTTGAAGAAGTaGTTCCACATGAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKMCLKK*FHMKEW
Trigger: CCACTCCTTCATGTGGAACAACTTCTTCAAGCACAT...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACAACACAACACTGAAATaGTGGCAGTGTCTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: QRDCFLALILDIESLCLHNTTLK*WQCLLP
Trigger: GGGCAACAGACACTGCCACAATTTCAGTGTTGTGTT...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp AGCCTCATGGCCAAGAACAATAAGTTCACCCACTTATCTGGAGTAACCATACTAAAATGGGCAAAAGGGTaGTATTTCCTGATGCTCTCA +
Preference number: 5 (lower is better)
Translates to: SLMAKNNKFTHLSGVTILKWAKG*YFLMLS
Trigger: TGAGAGCATCAGGAAATACAACCCTTTTGCCCATTT...TAGTATGGTTACTCCAGATAAGTGGGTGAACTTATTGTTCTTGGCCATGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS TCA 90 bp CCAAGATTTCAAGAATGGACAATCTCTCCTTCCCTAACTAGGGTCTaGAGAAAAATCATTGAAAGCTGTGTCACCTTTCTCATTTGCAGC +
Preference number: 5 (lower is better)
Translates to: PRFQEWTISPSLTRV*RKIIESCVTFLICS
Trigger: GCTGCAAATGAGAAAGGTGACACAGCTTTCAATGATTTTTCTTCAGACCCTAGTTAGGGAAGGAGAGATTGTCCATTCTTGAAATCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515747.1
CDS-3UTR CAA 90 bp CTCTCAGAACATCAGACCACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGAAATGGGCAAAAGGGTaGTATTTCCTGATGCTCTCA +
Preference number: 5 (lower is better)
Translates to: LSEHQTTPCEFKQDYFKWKWAKG*YFLMLS
Trigger: TGAGAGCATCAGGAAATACAACCCTTTTGCCCATTT...CCACTTAAAATAGTCCTGCTTAAATTCACATGGTGTGGTCTGATGTTCTGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCTGGATGTCAATGTGCTaGAAGAAGTTGTTCCACATG +
Preference number: 5 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSWMSMC*KKLFHM
Trigger: CATGTGGAACAACTTCTTCAAGCACATTGACATCCA...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAATGGTTTCTTCGAAGATaGGCTTTTCTCAGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKWFLRR*AFLSFF
Trigger: AAAGAAACTGAGAAAAGCCAATCTTCGAAGAAACCA...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp TTCAAAGAGGTGGTATCCAATATACATAAGCCCCTAATTCCCTCCCACTTGAAATTAGATATTGAGAGTTaGTGCCTTCACTTGGAACAA +
Preference number: 5 (lower is better)
Translates to: FKEVVSNIHKPLIPSHLKLDIES*CLHLEQ
Trigger: TTGTTCCAAGTGAAGGCACAAACTCTCAATATCTAA...TTTCAAGTGGGAGGGAATTAGGGGCTTATGTATATTGGATACCACCTCTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS-3UTR CAA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCAAATGGGCAAAAGGGTaGTATTTCCTGATGCTCTCA +
Preference number: 5 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSKWAKG*YFLMLS
Trigger: TGAGAGCATCAGGAAATACAACCCTTTTGCCCATTT...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS TCA 90 bp GACAATAGTACCTACTTCACAGACTTCACGACGGGTAATATGAAATaGGAGAATGCATGTAAACAACTTAGTATTTTCTACGTTGGCTGT +
Preference number: 5 (lower is better)
Translates to: DNSTYFTDFTTGNMK*ENACKQLSIFYVGC
Trigger: ACAGCCAACGTAGAAAATACTAAGTTGTTTACATGCATTCTCTCATTTCATATTACCCGTCGTGAAGTCTGTGAAGTAGGTACTATTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR CAA 90 bp CAAAGAGACTGCTTCCTTGCACTTATTTTAGATATTGAGAGTTTGTGCCTTCACTTAGTATTTTCTACGTaGGCTGTTACCATCCAGATA +
Preference number: 5 (lower is better)
Translates to: QRDCFLALILDIESLCLHLVFST*AVTIQI
Trigger: TATCTGGATGGTAACAGCCAACGTAGAAAATACTAA...GTGAAGGCACAAACTCTCAATATCTAAAATAAGTGCAAGGAAGCAGTCTCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS TCA 90 bp ATTGGGACAATAGTACCTACTTCACAGACTTCACGACGGGTAATATaGAATGAGAGAATGCATGTAAACAACTTAGTATTTTCTACGTTG +
Preference number: 5 (lower is better)
Translates to: IGTIVPTSQTSRRVI*NERMHVNNLVFSTL
Trigger: CAACGTAGAAAATACTAAGTTGTTTACATGCATTCTCTCATTTCATATTACCCGTCGTGAAGTCTGTGAAGTAGGTACTATTGTCCCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS-3UTR CAA 90 bp ACACCATGTGAATTTAAGCAGGACTATTTTAAGTGGGGAAACAATACTAGAAGCTGGTTTCTTCGAAGATaGGCTTTTCTCAGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: TPCEFKQDYFKWGNNTRSWFLRR*AFLSFF
Trigger: AAAGAAACTGAGAAAAGCCAATCTTCGAAGAAACCA...GCTTCTAGTATTGTTTCCCCACTTAAAATAGTCCTGCTTAAATTCACATGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS TCA 72 bp CCTGCAGGACCTCGGTCAAAGGACCTAAGTTCTCTCTaGGCCGTTTCCTCACGGACGCCTCCCGCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: PAGPRSKDLSSL*AVSSRTPPAAA
Trigger: AGCCGCCGCGGGAGGCGTCCGTGAGGAAACGGCTCAGAGAGAACTTAGGTCCTTTGACCGAGGTCCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500692.6
CDS CAA 72 bp ACACGGGTCCTGGACACCAGACTGGAGCCTGGCTCGTaGAAGGCAATGTGTCCATCAGGGCCGATGCCTCCA +
Preference number: 6 (lower is better)
Translates to: TRVLDTRLEPGS*KAMCPSGPMPP
Trigger: TGGAGGCATCGGCCCTGATGGACACATTGCCTTCAACGAGCCAGGCTCCAGTCTGGTGTCCAGGACCCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000504139.5
ENST00000505689.5
ENST00000507559.1
ENST00000508177.5
ENST00000510194.5
ENST00000513454.5
CDS CAA 72 bp GTGCCCACCCCCACCGTCAAGGCCATGGTGGGCACCTaGGTGAGTTCTCCATCGAAGAACCTAGCATTGGCC +
Preference number: 6 (lower is better)
Translates to: VPTPTVKAMVGT*VSSPSKNLALA
Trigger: GGCCAATGCTAGGTTCTTCGATGGAGAACTCACCAAGGTGCCCACCATGGCCTTGACGGTGGGGGTGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000505689.5
ENST00000507559.1
ENST00000508177.5
ENST00000513454.5
ENST00000515747.1
CDS CCA 72 bp CGTCTTCACACGGGTCCTGGACACCAGACTGGAGCCTaGCTCGTTGAAGGCAATGTGTCCATCAGGGCCGAT +
Preference number: 6 (lower is better)
Translates to: RLHTGPGHQTGA*LVEGNVSIRAD
Trigger: ATCGGCCCTGATGGACACATTGCCTTCAACGAGCCAGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000504139.5
ENST00000505689.5
ENST00000507559.1
ENST00000508177.5
ENST00000513454.5
ENST00000515747.1
CDS CCA 72 bp TGTGCTCTCTCTGGACTAGCGGAGGGGTCTTCCTACTaGCCCACCTTGCTTTGCGAACCCCTCTGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: CALSGLAEGSSY*PTLLCEPLWVF
Trigger: GAAGACCCAGAGGGGTTCGCAAAGCAAGGTGGGCCAGTAGGAAGACCCCTCCGCTAGTCCAGAGAGAGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS CAA 72 bp TCTGGACTAGCGGAGGGGTCTTCCTACTGGCCCACCTaGCTTTGCGAACCCCTCTGGGTCTTCAGTTTCCCC +
Preference number: 6 (lower is better)
Translates to: SGLAEGSSYWPT*LCEPLWVFSFP
Trigger: GGGGAAACTGAAGACCCAGAGGGGTTCGCAAAGCAAGGTGGGCCAGTAGGAAGACCCCTCCGCTAGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS CAA 90 bp AGCGTCTTCACACGGGTCCTGGACACCAGACTGGAGCCTGGCTCGTaGAAGGCAATGTGTCCATCAGGGCCGATGCCTATAGGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: SVFTRVLDTRLEPGS*KAMCPSGPMPIGRE
Trigger: CTCTCTCCCTATAGGCATCGGCCCTGATGGACACATTGCCTTCAACGAGCCAGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAGACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515747.1
CDS CAA 90 bp AGCGTCTTCACACGGGTCCTGGACACCAGACTGGAGCCTGGCTCGTaGAAGGCAATGTGTCCATCAGGGCCGATGCCTCCAACAAATAGC +
Preference number: 6 (lower is better)
Translates to: SVFTRVLDTRLEPGS*KAMCPSGPMPPTNS
Trigger: GCTATTTGTTGGAGGCATCGGCCCTGATGGACACATTGCCTTCAACGAGCCAGGCTCCAGTCTGGTGTCCAGGACCCGTGTGAAGACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000504139.5
ENST00000505689.5
ENST00000507559.1
ENST00000508177.5
ENST00000513454.5
CDS CAA 90 bp TCCATGACAGTGCCCACCCCCACCGTCAAGGCCATGGTGGGCACCTaGGTGAGTTCTCCATCGAAGAACCTAGCATTGGCCAGGATGGTA +
Preference number: 6 (lower is better)
Translates to: SMTVPTPTVKAMVGT*VSSPSKNLALARMV
Trigger: TACCATCCTGGCCAATGCTAGGTTCTTCGATGGAGAACTCACCAAGGTGCCCACCATGGCCTTGACGGTGGGGGTGGGCACTGTCATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000505689.5
ENST00000507559.1
ENST00000508177.5
ENST00000513454.5
ENST00000515747.1
CDS CCA 72 bp CATTGTGTCTTGTCCTCCTTCCCACGGGTCTGGCCCTaGACATGTGTGCTGCAGAGTGTCAAGCTCACCTCC +
Preference number: 6 (lower is better)
Translates to: HCVLSSFPRVWP*TCVLQSVKLTS
Trigger: GGAGGTGAGCTTGACACTCTGCAGCACACATGTCCAGGGCCAGACCCGTGGGAAGGAGGACAAGACACAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507107.1
CDS CCA 72 bp GACAGGCATTGTGTCTTGTCCTCCTTCCCACGGGTCTaGCCCTGGACATGTGTGCTGCAGAGTGTCAAGCTC +
Preference number: 6 (lower is better)
Translates to: DRHCVLSSFPRV*PWTCVLQSVKL
Trigger: GAGCTTGACACTCTGCAGCACACATGTCCAGGGCCAGACCCGTGGGAAGGAGGACAAGACACAATGCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507107.1
CDS CAA 72 bp ACACGGGTCCTGGACACCAGACTGGAGCCTGGCTCGTaGAAGGCAATGTGTCCATCAGGGCCGATGCCTATA +
Preference number: 6 (lower is better)
Translates to: TRVLDTRLEPGS*KAMCPSGPMPI
Trigger: TATAGGCATCGGCCCTGATGGACACATTGCCTTCAACGAGCCAGGCTCCAGTCTGGTGTCCAGGACCCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515747.1
CDS TCA 72 bp CCTGCAGGACCTCGGTCAAAGGACCTAAGTTCTCTCTaGGCCGTTTCCTCCTTGCTTTGCGAACCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: PAGPRSKDLSSL*AVSSLLCEPLW
Trigger: CCAGAGGGGTTCGCAAAGCAAGGAGGAAACGGCTCAGAGAGAACTTAGGTCCTTTGACCGAGGTCCTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504424.1
CDS GCA 72 bp GACTCTTCCTCCAGAAGTAGAGAGGTCATGGGATCATaGTGGGCCACTAGAGCAGGTGGGGCAATGAGCTCT +
Preference number: 6 (lower is better)
Translates to: DSSSRSREVMGS*WATRAGGAMSS
Trigger: AGAGCTCATTGCCCCACCTGCTCTAGTGGCCCAGCATGATCCCATGACCTCTCTACTTCTGGAGGAAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS CCA 72 bp TACCCCAAGACTCTTCCTCCAGAAGTAGAGAGGTCATaGGATCATGCTGGGCCACTAGAGCAGGTGGGGCAA +
Preference number: 6 (lower is better)
Translates to: YPKTLPPEVERS*DHAGPLEQVGQ
Trigger: TTGCCCCACCTGCTCTAGTGGCCCAGCATGATCCCATGACCTCTCTACTTCTGGAGGAAGAGTCTTGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS CCA 72 bp CCCAGGGTGAAGTACTTCTCTGGCCCTGGGTTAAACTaGATGATGCGGTTCCTGATGTATTTAGCCGCCCAC +
Preference number: 6 (lower is better)
Translates to: PRVKYFSGPGLN*MMRFLMYLAAH
Trigger: GTGGGCGGCTAAATACATCAGGAACCGCATCATCCAGTTTAACCCAGGGCCAGAGAAGTACTTCACCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503229.5
ENST00000503794.5
ENST00000504139.5
ENST00000505689.5
ENST00000507107.1
ENST00000508177.5
ENST00000510194.5
ENST00000513454.5
CDS CAA 72 bp GGACCTAAGTTCTCTCTGAGCCGTTTCCTCCTTGCTTaGCGAACCCCTCTGGGTCTTCAGTTTCCCCCAAAG +
Preference number: 6 (lower is better)
Translates to: GPKFSLSRFLLA*RTPLGLQFPPK
Trigger: CTTTGGGGGAAACTGAAGACCCAGAGGGGTTCGCAAAGCAAGGAGGAAACGGCTCAGAGAGAACTTAGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504424.1
CDS GCA 72 bp GATCAAGTCAGGAAGTCAGCTGGACCCATTAGACTGTaGCCTGGTGTGAGAATTAGCCTGCCATCTTGGCTA +
Preference number: 6 (lower is better)
Translates to: DQVRKSAGPIRL*PGVRISLPSWL
Trigger: TAGCCAAGATGGCAGGCTAATTCTCACACCAGGGCACAGTCTAATGGGTCCAGCTGACTTCCTGACTTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS TCA 72 bp TCTCTTACCCAGCAACAATCCCCTTCCCAAGCTGTCTaGGCCAGGAAAAAGGCCTTTCTATTCACAGAGGAG +
Preference number: 6 (lower is better)
Translates to: SLTQQQSPSQAV*ARKKAFLFTEE
Trigger: CTCCTCTGTGAATAGAAAGGCCTTTTTCCTGGCTCAGACAGCTTGGGAAGGGGATTGTTGCTGGGTAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS GCA 72 bp ATCTGGGTTCTAATCTCAGCTCCTTCACTTACCACCTaGAGGACCTCGGTCAAAGGACCTAAGTTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: IWVLISAPSLTT*RTSVKGPKFSL
Trigger: CAGAGAGAACTTAGGTCCTTTGACCGAGGTCCTGCAGGTGGTAAGTGAAGGAGCTGAGATTAGAACCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS TCA 72 bp CCTGCAGGACCTCGGTCAAAGGACCTAAGTTCTCTCTaGGCCGTTTCCTCCTATGTAAAAATTGGGACAATA +
Preference number: 6 (lower is better)
Translates to: PAGPRSKDLSSL*AVSSYVKIGTI
Trigger: TATTGTCCCAATTTTTACATAGGAGGAAACGGCTCAGAGAGAACTTAGGTCCTTTGACCGAGGTCCTGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000503229.5
ENST00000503794.5
ENST00000508177.5
CDS TCA 72 bp ATTAGCCTGCCATCTTGGCTAAATCCCGAAGTTTGTTaGGTAGATGTATCCCTTCCTGTTGACCTGTGGAGG +
Preference number: 6 (lower is better)
Translates to: ISLPSWLNPEVC*VDVSLPVDLWR
Trigger: CCTCCACAGGTCAACAGGAAGGGATACATCTACTCAACAAACTTCGGGATTTAGCCAAGATGGCAGGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513454.5
CDS CCA 72 bp GTCGACTGCATTCCCATCCAGAATGTGGGTGTTTTCTaGGTGGATGTCAATGTGCTTGAAGAAGTTGTTCCA +
Preference number: 6 (lower is better)
Translates to: VDCIPIQNVGVF*VDVNVLEEVVP
Trigger: TGGAACAACTTCTTCAAGCACATTGACATCCACCCAGAAAACACCCACATTCTGGATGGGAATGCAGTCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503229.5
ENST00000503794.5
ENST00000504139.5
ENST00000505689.5
ENST00000507107.1
ENST00000507559.1
ENST00000508177.5
ENST00000510194.5
ENST00000513454.5
CDS CCA 72 bp CTTGACACTAGGTCCCAGCACAGGCTAATCGCTGTATaGTTTCTTCGAAGATTGGCTTTTCTCAGTTTCTTT +
Preference number: 6 (lower is better)
Translates to: LDTRSQHRLIAV*FLRRLAFLSFF
Trigger: AAAGAAACTGAGAAAAGCCAATCTTCGAAGAAACCATACAGCGATTAGCCTGTGCTGGGACCTAGTGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311337.11
ENST00000500692.6
ENST00000503794.5
ENST00000508177.5
CDS GCA 72 bp AGAAAAATCATTGAAAGCTGTGTCACCTTTCTCATTTaGAGCCCTGGGCAGGTACACCTTAAACATGTGATC +
Preference number: 6 (lower is better)
Translates to: RKIIESCVTFLI*SPGQVHLKHVI
Trigger: GATCACATGTTTAAGGTGTACCTGCCCAGGGCTGCAAATGAGAAAGGTGACACAGCTTTCAATGATTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515747.1
CDS CAA 72 bp GAGAGAATGCATGTAAACAACTTAGTATTTTCTACGTaGGCTGTTACCATCCAGATAGATGCTCGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: ERMHVNNLVFST*AVTIQIDARLS
Trigger: GCTGAGCCGAGCATCTATCTGGATGGTAACAGCCAACGTAGAAAATACTAAGTTGTTTACATGCATTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS TCA 72 bp CAAGAATGGACAATCTCTCCTTCCCTAACTAGGGTCTaGAGAAAAATCATTGAAAGCTGTGTCACCTTTCTC +
Preference number: 6 (lower is better)
Translates to: QEWTISPSLTRV*RKIIESCVTFL
Trigger: GAGAAAGGTGACACAGCTTTCAATGATTTTTCTTCAGACCCTAGTTAGGGAAGGAGAGATTGTCCATTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515747.1
CDS TCA 72 bp ACCTACTTCACAGACTTCACGACGGGTAATATGAAATaGGAGAATGCATGTAAACAACTTAGTATTTTCTAC +
Preference number: 6 (lower is better)
Translates to: TYFTDFTTGNMK*ENACKQLSIFY
Trigger: GTAGAAAATACTAAGTTGTTTACATGCATTCTCTCATTTCATATTACCCGTCGTGAAGTCTGTGAAGTAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508177.5
CDS TCA 72 bp ATAGTACCTACTTCACAGACTTCACGACGGGTAATATaGAATGAGAGAATGCATGTAAACAACTTAGTATTT +
Preference number: 6 (lower is better)
Translates to: IVPTSQTSRRVI*NERMHVNNLVF
Trigger: AAATACTAAGTTGTTTACATGCATTCTCTCATTTCATATTACCCGTCGTGAAGTCTGTGAAGTAGGTACTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508177.5