Pregenerated sensors for GNG5 (Homo sapiens)

Ensembl gene IDs: ENSG00000174021

Ensembl transcript IDs: ENST00000370641.3, ENST00000370645.9, ENST00000487806.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GGCGGGGGCGGGGCTCCGAACTTTGTCTCTAAGTTTCCGGTTCTGTaGTCAGCGGCTCCACCCTCGGTGCGCATGCGCGCCTTGCCAGCC	+
Preference number: 5 (lower is better) Translates to: GGGGAPNFVSKFPVL*SAAPPSVRMRALPA Trigger: GGCTGGCAAGGCGCGCATGCGCACCGAGGGTGGAGCCGCTGAGCACAGAACCGGAAACTTAGAGACAAAGTTCGGAGCCCCGCCCCCGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370641.3 ENST00000370645.9
CDS GCA 90 bp	TTGTCTCTAAGTTTCCGGTTCTGTGCTCAGCGGCTCCACCCTCGGTaGGCATGCGCGCCTTGCCAGCCCTCTGTTCCAGCTCCACACCCG	+
Preference number: 5 (lower is better) Translates to: LSLSFRFCAQRLHPR*ACAPCQPSVPAPHP Trigger: CGGGTGTGGAGCTGGAACAGAGGGCTGGCAAGGCGCGCATGCGCACCGAGGGTGGAGCCGCTGAGCACAGAACCGGAAACTTAGAGACAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370641.3 ENST00000370645.9
CDS CCA 90 bp	CTAAGAGGGGGTCTGAAGAGGACCAGGGAGGGAAGGCAGAGCTTGTaGGAGTTTCTAAAAGGCCCGGCGGCGGGTGACCAGGAGGTCTCA	+
Preference number: 5 (lower is better) Translates to: LRGGLKRTREGRQSL*EFLKGPAAGDQEVS Trigger: TGAGACCTCCTGGTCACCCGCCGCCGGGCCTTTTAGAAACTCCCACAAGCTCTGCCTTCCCTCCCTGGTCCTCTTCAGACCCCCTCTTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370641.3 ENST00000370645.9
CDS TCA 90 bp	GGGAAGGCAGAGCTTGTGGGAGTTTCTAAAAGGCCCGGCGGCGGGTaGCCAGGAGGTCTCAGTTTTCCTCCCAGTTTGTGGGAAGGGTTG	+
Preference number: 5 (lower is better) Translates to: GKAELVGVSKRPGGG*PGGLSFPPSLWEGL Trigger: CAACCCTTCCCACAAACTGGGAGGAAAACTGAGACCTCCTGGTCACCCGCCGCCGGGCCTTTTAGAAACTCCCACAAGCTCTGCCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370645.9
CDS GCA 90 bp	GGGGTCCAATGTAACTCGCTTTCACAATTTTCAAGCACCACTATGTaGCGCATATACTTACAGGCACTAAGAATACATAAGAACAGCCAG	+
Preference number: 5 (lower is better) Translates to: GVQCNSLSQFSSTTM*RIYLQALRIHKNSQ Trigger: CTGGCTGTTCTTATGTATTCTTAGTGCCTGTAAGTATATGCGGCACATAGTGGTGCTTGAAAATTGTGAAAGCGAGTTACATTGGACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487806.5
CDS CAA 90 bp	CCGGTTCTGTGCTCAGCGGCTCCACCCTCGGTGCGCATGCGCGCCTaGCCAGCCCTCTGTTCCAGCTCCACACCCGGCCCCGAGCGCGAG	+
Preference number: 6 (lower is better) Translates to: PVLCSAAPPSVRMRA*PALCSSSTPGPERE Trigger: CTCGCGCTCGGGGCCGGGTGTGGAGCTGGAACAGAGGGCTGGCAAGGCGCGCATGCGCACCGAGGGTGGAGCCGCTGAGCACAGAACCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370641.3 ENST00000370645.9
CDS GCA 72 bp	AGTTTCCGGTTCTGTGCTCAGCGGCTCCACCCTCGGTaGGCATGCGCGCCTTGCCAGCCCTCTGTTCCAGCT	+
Preference number: 6 (lower is better) Translates to: SFRFCAQRLHPR*ACAPCQPSVPA Trigger: AGCTGGAACAGAGGGCTGGCAAGGCGCGCATGCGCACCGAGGGTGGAGCCGCTGAGCACAGAACCGGAAACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370641.3 ENST00000370645.9
CDS GCA 72 bp	GGGGCTCCGAACTTTGTCTCTAAGTTTCCGGTTCTGTaGTCAGCGGCTCCACCCTCGGTGCGCATGCGCGCC	+
Preference number: 6 (lower is better) Translates to: GAPNFVSKFPVL*SAAPPSVRMRA Trigger: GGCGCGCATGCGCACCGAGGGTGGAGCCGCTGAGCACAGAACCGGAAACTTAGAGACAAAGTTCGGAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370641.3 ENST00000370645.9
CDS TCA 72 bp	GAGCTTGTGGGAGTTTCTAAAAGGCCCGGCGGCGGGTaGCCAGGAGGTCTCAGTTTTCCTCCCAGTTTGTGG	+
Preference number: 6 (lower is better) Translates to: ELVGVSKRPGGG*PGGLSFPPSLW Trigger: CCACAAACTGGGAGGAAAACTGAGACCTCCTGGTCACCCGCCGCCGGGCCTTTTAGAAACTCCCACAAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370641.3 ENST00000370645.9