RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GMPS (Homo sapiens)

Ensembl gene IDs: ENSG00000163655

Ensembl transcript IDs: ENST00000295920.7, ENST00000476145.1, ENST00000496455.7

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGAAACTCTTCCCTTGCTGGTCCAGCAGCAGTTTTCTTGTTCCCTaGACCAGCCAGAATAAAAAGATGACTTCTGCCACGCATCATTTT +
Preference number: 1 (lower is better)
Translates to: QKLFPCWSSSSFLVP*TSQNKKMTSATHHF
Trigger: AAAATGATGCGTGGCAGAAGTCATCTTTTTATTCTGGCTGGTCCAGGGAACAAGAAAACTGCTGCTGGACCAGCAAGGGAAGAGTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR GCA 90 bp CTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTCCTCTTCCATaGAGAGAATCAGAAAGCTTGGATTCTAGCTCTAGCTCCCAACAA +
Preference number: 1 (lower is better)
Translates to: LLRFALKGPRAFPLP*RESESLDSSSSSQQ
Trigger: TTGTTGGGAGCTAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 90 bp ACTCAGCTCTTAAGCCGTAGATTTTTGCTGTGGAGAACTCAGATGTaGTGTAGCTGCTCCAGTAACTCTTTTCACAGTACTGCATGTCAA +
Preference number: 1 (lower is better)
Translates to: TQLLSRRFLLWRTQM*CSCSSNSFHSTACQ
Trigger: TTGACATGCAGTACTGTGAAAAGAGTTACTGGAGCAGCTACATCACATCTGAGTTCTCCACAGCAAAAATCTACGGCTTAAGAGCTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 90 bp AATCTCCAGGAAAGGACAAGTGAGCTTATGTTCCCCAAACTTATATaGCCACCTAATCCTTTTTACATGGACCTTCTCAGTGGAGCAGTG +
Preference number: 1 (lower is better)
Translates to: NLQERTSELMFPKLI*PPNPFYMDLLSGAV
Trigger: CACTGCTCCACTGAGAAGGTCCATGTAAAAAGGATTAGGTGGTCATATAAGTTTGGGGAACATAAGCTCACTTGTCCTTTCCTGGAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CCA 90 bp GCGCCACTGTGCCTGGTCACAAATATGTTAATGAGCCAATTAAGATaGTGCTGCTCAAATGATTCTAATTCAGGAAACTTAGGTTGCAGC +
Preference number: 1 (lower is better)
Translates to: APLCLVTNMLMSQLR*CCSNDSNSGNLGCS
Trigger: GCTGCAACCTAAGTTTCCTGAATTAGAATCATTTGAGCAGCACCATCTTAATTGGCTCATTAACATATTTGTGACCAGGCACAGTGGCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR GCA 90 bp GGCAAAGGCAAAAGCAGTATCAATCTGTCTGAGTGTAGGCAATGGTaGTTTGATTATTTACCCGTACAAACTCTTCAGTCCCTTTTGGTT +
Preference number: 1 (lower is better)
Translates to: GKGKSSINLSECRQW*FDYLPVQTLQSLLV
Trigger: AACCAAAAGGGACTGAAGAGTTTGTACGGGTAAATAATCAAAGCACCATTGCCTACACTCAGACAGATTGATACTGCTTTTGCCTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CCA 90 bp GAGCTGATGATCATAGATGTGGCCTTTAAGGCAGGACTGGGTATTTaGTTCTTAAAAATGATTCTGTGCCTGCCAATCTTAGGAATAAAT +
Preference number: 1 (lower is better)
Translates to: ELMIIDVAFKAGLGI*FLKMILCLPILGIN
Trigger: ATTTATTCCTAAGATTGGCAGGCACAGAATCATTTTTAAGAACCAAATACCCAGTCCTGCCTTAAAGGCCACATCTATGATCATCAGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 90 bp TTGACACTCTTTGGGGGATTCTATATCTCTTCACTTGCCATTAAGTaGAACGTTCAGAAATTTAAGAGTCAACAATGCCACCATTACTGC +
Preference number: 1 (lower is better)
Translates to: LTLFGGFYISSLAIK*NVQKFKSQQCHHYC
Trigger: GCAGTAATGGTGGCATTGTTGACTCTTAAATTTCTGAACGTTTCACTTAATGGCAAGTGAAGAGATATAGAATCCCCCAAAGAGTGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CCA 90 bp TATGGTAGCTTACATTTTATACCCTCAGTGTCCTTCAAAAGTGGCTaGAATAGCCCACCTATACCTTTATCTGATATGTTCATCTCTTTT +
Preference number: 1 (lower is better)
Translates to: YGSLHFIPSVSFKSG*NSPPIPLSDMFISF
Trigger: AAAAGAGATGAACATATCAGATAAAGGTATAGGTGGGCTATTCCAGCCACTTTTGAAGGACACTGAGGGTATAAAATGTAAGCTACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CCA 90 bp GTTCTTAAATCCTCTCTTATAGCTAGTAGAAAGGATTACAAAGTTTaGCAAACATCTTGCATGTATCAAGACTGTTCACAGGTGTCTGAG +
Preference number: 1 (lower is better)
Translates to: VLKSSLIASRKDYKV*QTSCMYQDCSQVSE
Trigger: CTCAGACACCTGTGAACAGTCTTGATACATGCAAGATGTTTGCCAAACTTTGTAATCCTTTCTACTAGCTATAAGAGAGGATTTAAGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR GCA 90 bp GCCTTTAAGGCAGGACTGGGTATTTGGTTCTTAAAAATGATTCTGTaGCTGCCAATCTTAGGAATAAATAATGCTTTCAATGATCTACAT +
Preference number: 1 (lower is better)
Translates to: AFKAGLGIWFLKMIL*LPILGINNAFNDLH
Trigger: ATGTAGATCATTGAAAGCATTATTTATTCCTAAGATTGGCAGGCACAGAATCATTTTTAAGAACCAAATACCCAGTCCTGCCTTAAAGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 90 bp ATATTCACAGAGACATCAACAGTGAATTTATACATAAAGAATAAGTaGGGCAAAGGCAAAAGCAGTATCAATCTGTCTGAGTGTAGGCAA +
Preference number: 1 (lower is better)
Translates to: IFTETSTVNLYIKNK*GKGKSSINLSECRQ
Trigger: TTGCCTACACTCAGACAGATTGATACTGCTTTTGCCTTTGCCTCACTTATTCTTTATGTATAAATTCACTGTTGATGTCTCTGTGAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTTCAGAACCGTTTCTCTaGCCAGCAAAAGAAGAGATG +
Preference number: 2 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFSEPFL*PAKEEM
Trigger: CATCTCTTCTTTTGCTGGTCAGAGAAACGGTTCTGA...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTCTGTTCACAGGTGTCTaGGCAATGAATAATATGTCT +
Preference number: 2 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFLFTGV*AMNNMS
Trigger: AGACATATTATTCATTGCTCAGACACCTGTGAACAG...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR GCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACCTCTTGACCTCTATCTaGACTACACCAGAAACGTCA +
Preference number: 2 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANLLTSI*TTPETS
Trigger: TGACGTTTCTGGTGTAGTGCAGATAGAGGTCAAGAG...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCTGGAGAACTCAGATGTaGTGTAGCTGCTCCAGTAAC +
Preference number: 2 (lower is better)
Translates to: NLAIRPSARPSLWPASLSWRTQM*CSCSSN
Trigger: GTTACTGGAGCAGCTACATCACATCTGAGTTCTCCA...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTTTCCTCCCAAGGCTGTaGAATAAAATTCAAAAGTAC +
Preference number: 2 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFFLPRL*NKIQKY
Trigger: GTACTTTTGAATTTTATTTCACAGCCTTGGGAGGAA...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCGTTAGAAACTGGTGGTaGTGGCAACAAGTCCTACAC +
Preference number: 2 (lower is better)
Translates to: NLAIRPSARPSLWPASLSVRNWW*WQQVLH
Trigger: GTGTAGGACTTGTTGCCATCACCACCAGTTTCTAAC...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTTTCCCCAAACTTATATaGCCACCTAATCCTTTTTAC +
Preference number: 2 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFFPKLI*PPNPFY
Trigger: GTAAAAAGGATTAGGTGGTCATATAAGTTTGGGGAA...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCCCAGGAAAGGACAAGTaGGCTTATGTTCCCCAAACT +
Preference number: 2 (lower is better)
Translates to: NLAIRPSARPSLWPASLSPGKDK*AYVPQT
Trigger: AGTTTGGGGAACATAAGCTCACTTGTCCTTTCCTGG...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTAGAACAGAAATGACTTaGCCAAGTTCACATTGTTGT +
Preference number: 2 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFRTEMT*PSSHCC
Trigger: ACAACAATGTGAACTTGGTCAAGTCATTTCTGTTCT...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR GCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTGCTTGTTTGACTAAATaGATGCAGTTTACCTCAAGA +
Preference number: 2 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFACLTK*MQFTSR
Trigger: TCTTGAGGTAAACTGCATGCATTTAGTCAAACAAGC...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR GCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCTCTCACAGCAGAAGATaGCCCAAGTGGTCAAACCTT +
Preference number: 2 (lower is better)
Translates to: NLAIRPSARPSLWPASLSSHSRR*PKWSNL
Trigger: AAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGA...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR GCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACGAGTGTAGGCAATGGTaGTTTGATTATTTACCCGTA +
Preference number: 2 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANECRQW*FDYLPV
Trigger: TACGGGTAAATAATCAAAGCACCATTGCCTACACTC...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR GCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCCAATGCCACCATTACTaGTGTCAAAGTCCTTCAGTG +
Preference number: 2 (lower is better)
Translates to: NLAIRPSARPSLWPASLSQCHHY*CQSPSV
Trigger: CACTGAAGGACTTTGACAGCAGTAATGGTGGCATTG...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCGCCAGAATAAAAAGATaGCTTCTGCCACGCATCATT +
Preference number: 2 (lower is better)
Translates to: NLAIRPSARPSLWPASLSARIKR*LLPRII
Trigger: AATGATGCGTGGCAGAAGTCATCTTTTTATTCTGGC...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCCTCGCCACATATCAATaGGATTTCTGGAGGGGAGTA +
Preference number: 2 (lower is better)
Translates to: PTCIQFPITFWIWVNERSLATYQ*DFWRGV
Trigger: TACTCCCCTCCAGAAATCTCATTGATATGTGGCGAG...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR GCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACCTCTTTTCACAGTACTaGATGTCAATAATGGGAATG +
Preference number: 2 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANLFSQY*MSIMGM
Trigger: CATTCCCATTATTGACATGCAGTACTGTGAAAAGAG...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CCA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCTTCTATGCAAGGCTGTaGGGGGCTGGTAATATAAGG +
Preference number: 2 (lower is better)
Translates to: PTCIQFPITFWIWVNERSFYARL*GAGNIR
Trigger: CCTTATATTACCAGCCCCCCACAGCCTTGCATAGAA...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CAA 90 bp GAGTTCAGTGAGACACTGAGGCCTCTTCAGTACATAAAAATAGGGTaGGAAGTTAGCATCTTGACACTCTTTGGGGGATTCTATATCTCT +
Preference number: 2 (lower is better)
Translates to: EFSETLRPLQYIKIG*EVSILTLFGGFYIS
Trigger: AGAGATATAGAATCCCCCAAAGAGTGTCAAGATGCTAACTTCCAACCCTATTTTTATGTACTGAAGAGGCCTCAGTGTCTCACTGAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCCTTTACGGTGCATTTTaGTGTTTCCCTTTGTGTCAT +
Preference number: 2 (lower is better)
Translates to: NLAIRPSARPSLWPASLSLYGAF*CFPLCH
Trigger: ATGACACAAAGGGAAACATCAAAATGCACCGTAAAG...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATGATACCCTGATCCCTTaGTCATCTGGTGGTGTTAAA +
Preference number: 2 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDDTLIP*SSGGVK
Trigger: TTTAACACCACCAGATGATCAAGGGATCAGGGTATC...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR GCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACTGTCATGTCAAGATGTaGTTTGGAGTAACAATTTTC +
Preference number: 2 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANCHVKM*FGVTIF
Trigger: GAAAATTGTTACTCCAAAGCACATCTTGACATGACA...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CAA 90 bp AAGGCAAAAGCAGTATCAATCTGTCTGAGTGTAGGCAATGGTGCTTaGATTATTTACCCGTACAAACTCTTCAGTCCCTTTTGGTTATCC +
Preference number: 2 (lower is better)
Translates to: KAKAVSICLSVGNGA*IIYPYKLFSPFWLS
Trigger: GGATAACCAAAAGGGACTGAAGAGTTTGTACGGGTAAATAATCAAAGCACCATTGCCTACACTCAGACAGATTGATACTGCTTTTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCTCAGATGAAATACTGTaGAGGTACAGAGTAATGCTA +
Preference number: 2 (lower is better)
Translates to: NLAIRPSARPSLWPASLSSDEIL*RYRVML
Trigger: TAGCATTACTCTGTACCTTCACAGTATTTCATCTGA...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTAACGGGAATAAAGTCATaGTATGCCCAGAATAACCAA +
Preference number: 2 (lower is better)
Translates to: LEHFLFHAENQKAWILALTGIKS*YAQNNQ
Trigger: TTGGTTATTCTGGGCATATCATGACTTTATTCCCGT...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTACTACCAGGAAAACTTTaGTGGGTGTTTTTCAAGTGT +
Preference number: 2 (lower is better)
Translates to: LEHFLFHAENQKAWILALLPGKL*WVFFKC
Trigger: ACACTTGAAAAACACCCATCAAAGTTTTCCTGGTAG...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR GCA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCGCATTTCCTCTTCCATaGAGAGAATCAGAAAGCTTG +
Preference number: 2 (lower is better)
Translates to: PTCIQFPITFWIWVNERSAFPLP*RESESL
Trigger: CAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGC...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CCA 90 bp ACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTTCTATTCCTTCAAAAGTGGCTaGAATAGCCCACCTATACCT +
Preference number: 2 (lower is better)
Translates to: TRNVIEPVSSKEITETFYSFKSG*NSPPIP
Trigger: AGGTATAGGTGGGCTATTCCAGCCACTTTTGAAGGA...ATAGAAAGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTAACATCAACAAATTCCTaGTGCTTTTCCATCTTATGG +
Preference number: 2 (lower is better)
Translates to: LEHFLFHAENQKAWILALTSTNS*CFSILW
Trigger: CCATAAGATGGAAAAGCACCAGGAATTTGTTGATGT...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTACAGAGTAATGCTATATaGCACAAAGCAAAAAGTGCT +
Preference number: 2 (lower is better)
Translates to: LEHFLFHAENQKAWILALQSNAI*HKAKSA
Trigger: AGCACTTTTTGCTTTGTGCCATATAGCATTACTCTG...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR TCA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCCAAGCAGCAGCAACCTaGGATGGAATTGTTAAGAGA +
Preference number: 2 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTQAAAT*DGIVKR
Trigger: TCTCTTAACAATTCCATCTCAGGTTGCTGCTGCTTG...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR GCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATTTTAAGAGTCAACAATaGCACCATTACTGCTGTCAA +
Preference number: 2 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDFKSQQ*HHYCCQ
Trigger: TTGACAGCAGTAATGGTGGCATTGTTGACTCTTAAA...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CCA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCTGGAGGGGAGTAGTGTaGGAAAGTGGTTATAACATT +
Preference number: 2 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTWRGVV*ESGYNI
Trigger: AATGTTATAACCACTTTCCCACACTACTCCCCTCCA...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CCA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCCATCTTGACACTCTTTaGGGGATTCTATATCTCTTC +
Preference number: 2 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTHLDTL*GILYLF
Trigger: GAAGAGATATAGAATCCCCCAAAGAGTGTCAAGATG...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 72 bp GGAGAATGGCGTGAACCCACGAAGCGGAGCTTGCAGTaGGCCGAGATTGTGCCACTGCACTTGGGGACAGAG +
Preference number: 3 (lower is better)
Translates to: GEWREPTKRSLQ*AEIVPLHLGTE
Trigger: CTCTGTCCCCAAGTGCAGTGGCACAATCTCGGCTCACTGCAAGCTCCGCTTCGTGGGTTCACGCCATTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CAA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCCCAGCAGCAGTTTTCTaGTTCCCTGGACCAGCCAGA +
Preference number: 3 (lower is better)
Translates to: NLAIRPSARPSLWPASLSPAAVF*FPGPAR
Trigger: TCTGGCTGGTCCAGGGAACAAGAAAACTGCTGCTGG...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR GCA 72 bp TTTGCCCTGAAGGGCCCTAGAGCATTTCCTCTTCCATaGAGAGAATCAGAAAGCTTGGATTCTAGCTCTAGC +
Preference number: 3 (lower is better)
Translates to: FALKGPRAFPLP*RESESLDSSSS
Trigger: GCTAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAGGGCCCTTCAGGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CAA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCTTGGAAGTTAGCATCTaGACACTCTTTGGGGGATTC +
Preference number: 3 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVLEVSI*TLFGGF
Trigger: GAATCCCCCAAAGAGTGTCAAGATGCTAACTTCCAA...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CAA 90 bp CACTACACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTACTCTTCAGTCCCTTTaGGTTATCCCCAACTCAGCT +
Preference number: 3 (lower is better)
Translates to: HYTRNVIEPVSSKEITETTLQSL*VIPNSA
Trigger: AGCTGAGTTGGGGATAACCAAAAGGGACTGAAGAGT...AGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGTGTAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CAA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCATTGTGCCACTGCACTaGGGGACAGAGCGAGACTCT +
Preference number: 3 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTIVPLH*GTERDS
Trigger: AGAGTCTCGCTCTGTCCCCAAGTGCAGTGGCACAAT...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 72 bp TGCATCATAGCTTCTGTGATCTCAGAACCGTTTCTCTaGCCAGCAAAAGAAGAGATGAAAATGCTCCTCTTG +
Preference number: 3 (lower is better)
Translates to: CIIASVISEPFL*PAKEEMKMLLL
Trigger: CAAGAGGAGCATTTTCATCTCTTCTTTTGCTGGTCAGAGAAACGGTTCTGAGATCACAGAAGCTATGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CCA 72 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTaGGTCAATGAAAGAAGCATCCATTGGGGTGATAGC +
Preference number: 3 (lower is better)
Translates to: PTCIQFPITFWI*VNERSIHWGDS
Trigger: GCTATCACCCCAATGGATGCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CAA 90 bp AGCTTACATTTTATACCCTCAGTGTCCTTCAAAAGTGGCTGGAATAGCCCACCTGTAGGCAATGGTGCTTaGATTATTTACCCGTACAAA +
Preference number: 3 (lower is better)
Translates to: SLHFIPSVSFKSGWNSPPVGNGA*IIYPYK
Trigger: TTTGTACGGGTAAATAATCAAAGCACCATTGCCTAC...AGGTGGGCTATTCCAGCCACTTTTGAAGGACACTGAGGGTATAAAATGTAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 72 bp TTAAGCCGTAGATTTTTGCTGTGGAGAACTCAGATGTaGTGTAGCTGCTCCAGTAACTCTTTTCACAGTACT +
Preference number: 3 (lower is better)
Translates to: LSRRFLLWRTQM*CSCSSNSFHST
Trigger: AGTACTGTGAAAAGAGTTACTGGAGCAGCTACATCACATCTGAGTTCTCCACAGCAAAAATCTACGGCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 72 bp ACACGCAGTAAAGAGAGATTCCTACCAGGAAAACTTTaGTGGGTGTTTTTCAAGTGTCATCTCACAGCAGAA +
Preference number: 3 (lower is better)
Translates to: TRSKERFLPGKL*WVFFKCHLTAE
Trigger: TTCTGCTGTGAGATGACACTTGAAAAACACCCATCAAAGTTTTCCTGGTAGGAATCTCTCTTTACTGCGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 72 bp GTGTTGAGGAACACTGACAAAAAGGTTAGAGTTCAGTaGGACACTGAGGCCTCTTCAGTACATAAAAATAGG +
Preference number: 3 (lower is better)
Translates to: VLRNTDKKVRVQ*DTEASSVHKNR
Trigger: CCTATTTTTATGTACTGAAGAGGCCTCAGTGTCTCACTGAACTCTAACCTTTTTGTCAGTGTTCCTCAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR GCA 72 bp AAAGAAGAGATGAAAATGCTCCTCTTGACCTCTATCTaGACTACACCAGAAACGTCATTGAGCCAGTTTCTT +
Preference number: 3 (lower is better)
Translates to: KEEMKMLLLTSI*TTPETSLSQFL
Trigger: AAGAAACTGGCTCAATGACGTTTCTGGTGTAGTGCAGATAGAGGTCAAGAGGAGCATTTTCATCTCTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CCA 72 bp AGACATCCAACTTGTATTCAGTTCCCCATTACATTCTaGATTTGGGTCAATGAAAGAAGCATCCATTGGGGT +
Preference number: 3 (lower is better)
Translates to: RHPTCIQFPITF*IWVNERSIHWG
Trigger: ACCCCAATGGATGCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGGATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CAA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATTTAAGCCGTAGATTTTaGCTGTGGAGAACTCAGATG +
Preference number: 3 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDLSRRF*LWRTQM
Trigger: CATCTGAGTTCTCCACAGCAAAAATCTACGGCTTAA...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CAA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCATGAAAATGCTCCTCTaGACCTCTATCTGCACTACA +
Preference number: 3 (lower is better)
Translates to: PTCIQFPITFWIWVNERSMKMLL*TSICTT
Trigger: TGTAGTGCAGATAGAGGTCAAGAGGAGCATTTTCAT...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR-3UTR CAA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCTCCTGCCTTCCTAATTaGAATGCTCTTATTCTCTAC +
Preference number: 3 (lower is better)
Translates to: PTCIQFPITFWIWVNERSSCLPN*NALILY
Trigger: GTAGAGAATAAGAGCATTCAAATTAGGAAGGCAGGA...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 72 bp GAAAGGACAAGTGAGCTTATGTTCCCCAAACTTATATaGCCACCTAATCCTTTTTACATGGACCTTCTCAGT +
Preference number: 3 (lower is better)
Translates to: ERTSELMFPKLI*PPNPFYMDLLS
Trigger: ACTGAGAAGGTCCATGTAAAAAGGATTAGGTGGTCATATAAGTTTGGGGAACATAAGCTCACTTGTCCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 72 bp GTTATAACATTGCGCAAGCAGATGTCAGAGAATTTCTaGAAGACAGGGCTATCTCTAGAAACTCACTGTAAG +
Preference number: 3 (lower is better)
Translates to: VITLRKQMSENF*KTGLSLETHCK
Trigger: CTTACAGTGAGTTTCTAGAGATAGCCCTGTCTTTCAGAAATTCTCTGACATCTGCTTGCGCAATGTTATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 72 bp AACTCCTCAGGTTATGTAATAATACGCATCCAGTGTTaGGGAACACTGACAAAAAGGTTAGAGTTCAGTGAG +
Preference number: 3 (lower is better)
Translates to: NSSGYVIIRIQC*GTLTKRLEFSE
Trigger: CTCACTGAACTCTAACCTTTTTGTCAGTGTTCCTCAACACTGGATGCGTATTATTACATAACCTGAGGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR GCA 72 bp AAAAGCAGTATCAATCTGTCTGAGTGTAGGCAATGGTaGTTTGATTATTTACCCGTACAAACTCTTCAGTCC +
Preference number: 3 (lower is better)
Translates to: KSSINLSECRQW*FDYLPVQTLQS
Trigger: GGACTGAAGAGTTTGTACGGGTAAATAATCAAAGCACCATTGCCTACACTCAGACAGATTGATACTGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR GCA 72 bp GCTAGTAGAAAGGATTACAAAGTTTGGCAAACATCTTaGATGTATCAAGACTGTTCACAGGTGTCTGAGCAA +
Preference number: 3 (lower is better)
Translates to: ASRKDYKVWQTS*MYQDCSQVSEQ
Trigger: TTGCTCAGACACCTGTGAACAGTCTTGATACATGCAAGATGTTTGCCAAACTTTGTAATCCTTTCTACTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CCA 72 bp TTGATTATTTACCCGTACAAACTCTTCAGTCCCTTTTaGTTATCCCCAACTCAGCTCTTAAGCCGTAGATTT +
Preference number: 3 (lower is better)
Translates to: LIIYPYKLFSPF*LSPTQLLSRRF
Trigger: AAATCTACGGCTTAAGAGCTGAGTTGGGGATAACCAAAAGGGACTGAAGAGTTTGTACGGGTAAATAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CCA 72 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATaGCCTGCATCTCTCTCCTATAGGTTTGACAAAGAT +
Preference number: 3 (lower is better)
Translates to: NLAIRPSARPSL*PASLSYRFDKD
Trigger: ATCTTTGTCAAACCTATAGGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CCA 72 bp TTACATTTTATACCCTCAGTGTCCTTCAAAAGTGGCTaGAATAGCCCACCTATACCTTTATCTGATATGTTC +
Preference number: 3 (lower is better)
Translates to: LHFIPSVSFKSG*NSPPIPLSDMF
Trigger: GAACATATCAGATAAAGGTATAGGTGGGCTATTCCAGCCACTTTTGAAGGACACTGAGGGTATAAAATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 72 bp TGTGAATGTTATAAAAGATCTGTTAGAAACTGGTGGTaGTGGCAACAAGTCCTACACCAGTTCTTAAATCCT +
Preference number: 3 (lower is better)
Translates to: CECYKRSVRNWW*WQQVLHQFLNP
Trigger: AGGATTTAAGAACTGGTGTAGGACTTGTTGCCATCACCACCAGTTTCTAACAGATCTTTTATAACATTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 72 bp TTTGGGGGATTCTATATCTCTTCACTTGCCATTAAGTaGAACGTTCAGAAATTTAAGAGTCAACAATGCCAC +
Preference number: 3 (lower is better)
Translates to: FGGFYISSLAIK*NVQKFKSQQCH
Trigger: GTGGCATTGTTGACTCTTAAATTTCTGAACGTTTCACTTAATGGCAAGTGAAGAGATATAGAATCCCCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR TCA 72 bp TTCAGAATTTCTCAGAGCTTTGAATATTATATACCATaGATCTCCAGGAAAGGACAAGTGAGCTTATGTTCC +
Preference number: 3 (lower is better)
Translates to: FRISQSFEYYIP*ISRKGQVSLCS
Trigger: GGAACATAAGCTCACTTGTCCTTTCCTGGAGATTCATGGTATATAATATTCAAAGCTCTGAGAAATTCTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR GCA 72 bp GTTCAGAAATTTAAGAGTCAACAATGCCACCATTACTaGTGTCAAAGTCCTTCAGTGATTAAAAAGATACCA +
Preference number: 3 (lower is better)
Translates to: VQKFKSQQCHHY*CQSPSVIKKIP
Trigger: TGGTATCTTTTTAATCACTGAAGGACTTTGACAGCAGTAATGGTGGCATTGTTGACTCTTAAATTTCTGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR GCA 72 bp GTCACAAATATGTTAATGAGCCAATTAAGATGGTGCTaGTCAAATGATTCTAATTCAGGAAACTTAGGTTGC +
Preference number: 3 (lower is better)
Translates to: VTNMLMSQLRWC*SNDSNSGNLGC
Trigger: GCAACCTAAGTTTCCTGAATTAGAATCATTTGAGCAGCACCATCTTAATTGGCTCATTAACATATTTGTGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR GCA 72 bp CTGGTCACAAATATGTTAATGAGCCAATTAAGATGGTaGTGCTCAAATGATTCTAATTCAGGAAACTTAGGT +
Preference number: 3 (lower is better)
Translates to: LVTNMLMSQLRW*CSNDSNSGNLG
Trigger: ACCTAAGTTTCCTGAATTAGAATCATTTGAGCAGCACCATCTTAATTGGCTCATTAACATATTTGTGACCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CCA 72 bp TGCCTGGTCACAAATATGTTAATGAGCCAATTAAGATaGTGCTGCTCAAATGATTCTAATTCAGGAAACTTA +
Preference number: 3 (lower is better)
Translates to: CLVTNMLMSQLR*CCSNDSNSGNL
Trigger: TAAGTTTCCTGAATTAGAATCATTTGAGCAGCACCATCTTAATTGGCTCATTAACATATTTGTGACCAGGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTCCACGAAGCGGAGCTTaGAGTGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFPRSGA*SEPRLC
Trigger: GCACAATCTCGGCTCACTGCAAGCTCCGCTTCGTGG...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCGCTTGGAGTCTCCGTTaGACAGAGCCATCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVAWSLR*TEPSGP
Trigger: TGGCCCCGATGGCTCTGTGCAACGGAGACTCCAAGC...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACTGCCAGGCCAGGACCTaGAAATGGATGCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANCQART*KWMPGN
Trigger: GTTTCCAGGCATCCATTTCCAGGTCCTGGCCTGGCA...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCCAGAAAAGCGCCGAATaGAGCAACAGCAGCGGAGCG +
Preference number: 4 (lower is better)
Translates to: NLAIRPSARPSLWPASLSQKSAE*SNSSGA
Trigger: CGCTCCGCTGCTGTTGCTCCATTCGGCGCTTTTCTG...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTTTCTATGCAAGGCTGTaGGGGGCTGGTAATATAAGG +
Preference number: 4 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFFYARL*GAGNIR
Trigger: CCTTATATTACCAGCCCCCCACAGCCTTGCATAGAA...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCACTGAGGCAGGAGAATaGCGTGAACCCACGAAGCGG +
Preference number: 4 (lower is better)
Translates to: NLAIRPSARPSLWPASLSTEAGE*REPTKR
Trigger: CCGCTTCGTGGGTTCACGCCATTCTCCTGCCTCAGT...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCCTCTGTTCTGCACGGTaGAGGTTCCACTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: NLAIRPSARPSLWPASLSLCSAR*RFHCIQ
Trigger: CTGGATGCAGTGGAACCTTCACCGTGCAGAACAGAG...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTCTGTTGTGCAGGCTTTaGCTCTCTGTAATAGGGTAT +
Preference number: 4 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFLLCRL*LSVIGY
Trigger: ATACCCTATTACAGAGAGTCAAAGCCTGCACAACAG...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATGATCTCCTGATCTCGTaGTCCACCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDDLLIS*STHLGL
Trigger: GAGGCCGAGGTGGGTGGATCACGAGATCAGGAGATC...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTATACGCATCCAGTGTTaGGGAACACTGACAAAAAGG +
Preference number: 4 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFIRIQC*GTLTKR
Trigger: CCTTTTTGTCAGTGTTCCTCAACACTGGATGCGTAT...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTCTCTTGACCTCTATCTaGACTACACCAGAAACGTCA +
Preference number: 4 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFLLTSI*TTPETS
Trigger: TGACGTTTCTGGTGTAGTGCAGATAGAGGTCAAGAG...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCTTCACCAGGCCGGAGTaGAGTGGCACTATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVFTRPE*SGTISA
Trigger: AGCTGAGATAGTGCCACTGCACTCCGGCCTGGTGAA...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCAGCCTTCCGAGTAGCTaGGATTACAGGCGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: PTCIQFPITFWIWVNERSSLPSS*DYRRAP
Trigger: TGGCGCGCGCCTGTAATCCCAGCTACTCGGAAGGCT...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTCAAGAAGGCATTCAGTaGATGCAGACTGGTAATTTG +
Preference number: 4 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFQEGIQ*MQTGNL
Trigger: CAAATTACCAGTCTGCATTCACTGAATGCCTTCTTG...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACCTGGATTTGGGTCAATaGAAGAAGCATCCATTGGGG +
Preference number: 4 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANLDLGQ*KKHPLG
Trigger: CCCCAATGGATGCTTCTTTCATTGACCCAAATCCAG...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCATGACTTTCCCGTACTaGGCACCAGCATCCAGAATG +
Preference number: 4 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVMTFPY*APASRM
Trigger: CATTCTGGATGCTGGTGCTCAGTACGGGAAAGTCAT...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCTCACTCTTCGGTCTATaGCTTTCCCGTACTGAGCAC +
Preference number: 4 (lower is better)
Translates to: NLAIRPSARPSLWPASLSSLFGL*LSRTEH
Trigger: GTGCTCAGTACGGGAAAGTCATAGACCGAAGAGTGA...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTACGGGAATAAAGTCATaGTATGCCCAGAATAACCAA +
Preference number: 4 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFTGIKS*YAQNNQ
Trigger: TTGGTTATTCTGGGCATATCATGACTTTATTCCCGT...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTCTACCAGGAAAACTTTaGTGGGTGTTTTTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFLPGKL*WVFFKC
Trigger: ACACTTGAAAAACACCCATCAAAGTTTTCCTGGTAG...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp GCAAAAGCAGTATCAATCTGTCTGAGTGTAGGCAATGGTGCTTTGATTATTTACAAGCGGAGCTTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: AKAVSICLSVGNGALIIYKRSLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAAGCTCCGCTT...GTAAATAATCAAAGCACCATTGCCTACACTCAGACAGATTGATACTGCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTGCAATGACTTGTTCTTaGTTCAAAGCACGATTTAGC +
Preference number: 4 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFAMTCS*FKARFS
Trigger: GCTAAATCGTGCTTTGAACCAAGAACAAGTCATTGC...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp ACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTTCTATGCAAGCTCCGCCTCCTaGGTTCAGGCCATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TRNVIEPVSSKEITETFYASSAS*VQAILL
Trigger: CAGGAGAATGGCCTGAACCCAGGAGGCGGAGCTTGC...ATAGAAAGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACTGCCTACTCTCTCTTTaGTCTCTCGAATACACTCAA +
Preference number: 4 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANCLLSL*SLEYTQ
Trigger: TTGAGTGTATTCGAGAGATCAAAGAGAGAGTAGGCA...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp AGCTTACATTTTATACCCTCAGTGTCCTTCAAAAGTGGCTGGAATAGCCCACCTAGCTGTACAAACTGTTaGGTCTACTCCACCACTGAG +
Preference number: 4 (lower is better)
Translates to: SLHFIPSVSFKSGWNSPPSCTNC*VYSTTE
Trigger: CTCAGTGGTGGAGTAGACTCAACAGTTTGTACAGCT...AGGTGGGCTATTCCAGCCACTTTTGAAGGACACTGAGGGTATAAAATGTAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATCAGCACATATTACTCTaGTTGCCAGGCCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDQHILL*LPGQDL
Trigger: CAGGTCCTGGCCTGGCAATCAGAGTAATATGTGCTG...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp CACTACACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTAAAACTGTAAATGCTTaGCGGGCGTGGTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: HYTRNVIEPVSSKEITETKTVNA*RAWWLT
Trigger: CGTGAGCCACCACGCCCGGCAAGCATTTACAGTTTT...AGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGTGTAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCAGGCCAACTTCAGGGTaGAACTGTGCTCCATATAAC +
Preference number: 4 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVRPTSG*NCAPYN
Trigger: GTTATATGGAGCACAGTTCCACCCTGAAGTTGGCCT...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACGCCTCTTCAACAGACTaGCTTTCTCGTTTTCTCATA +
Preference number: 4 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANASSTD*LSRFLI
Trigger: TATGAGAAAACGAGAAAGCCAGTCTGTTGAAGAGGC...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTAGGCCGTAAAGTACCTTaGGCAAGGAAAACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LEHFLFHAENQKAWILALGRKVP*ARKTSS
Trigger: AGAGGAGGTTTTCCTTGCCCAAGGTACTTTACGGCC...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CACTACACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTCAGCATTCTCCAGCTTaGAGTCTCCGTTGCACAGAG +
Preference number: 4 (lower is better)
Translates to: HYTRNVIEPVSSKEITETQHSPA*SLRCTE
Trigger: CTCTGTGCAACGGAGACTCCAAGCTGGAGAATGCTG...AGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGTGTAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTATGAGCCAATTAAGATaGTGCTGCTCAAATGATTCT +
Preference number: 4 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFMSQLR*CCSNDS
Trigger: AGAATCATTTGAGCAGCACCATCTTAATTGGCTCAT...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CACTACACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTGGGGTTTCACCATGTTaGCCACGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: HYTRNVIEPVSSKEITETGVSPC*PRWSQT
Trigger: AGTTTGAGACCAGCGTGGCCAACATGGTGAAACCCC...AGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGTGTAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCCAAGCAGCAGCAACCTaGGATGGAATTGTTAAGAGA +
Preference number: 4 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVQAAAT*DGIVKR
Trigger: TCTCTTAACAATTCCATCTCAGGTTGCTGCTGCTTG...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACATGTCAGAGAATTTCTaGAAGACAGGGCTATCTCTA +
Preference number: 4 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANMSENF*KTGLSL
Trigger: TAGAGATAGCCCTGTCTTTCAGAAATTCTCTGACAT...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTACTCGCCACATATCAATaGGATTTCTGGAGGGGAGTA +
Preference number: 4 (lower is better)
Translates to: LEHFLFHAENQKAWILALLATYQ*DFWRGV
Trigger: TACTCCCCTCCAGAAATCTCATTGATATGTGGCGAG...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTATCAAGTTCTCTGTTCTaGACGGTGAAGGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LEHFLFHAENQKAWILALSSSLF*TVKVPL
Trigger: CAGTGGAACCTTCACCGTGCAGAACAGAGAACTTGA...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp AGCTTACATTTTATACCCTCAGTGTCCTTCAAAAGTGGCTGGAATAGCCCACCTACATATTACTCTGATTaGCAGGCCAGGACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SLHFIPSVSFKSGWNSPPTYYSD*QARTWK
Trigger: TTTCCAGGTCCTGGCCTGGCAATCAGAGTAATATGT...AGGTGGGCTATTCCAGCCACTTTTGAAGGACACTGAGGGTATAAAATGTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp AGCTTACATTTTATACCCTCAGTGTCCTTCAAAAGTGGCTGGAATAGCCCACCTGGGAAAATTTCAGACTaGACGAACAGTTCCCTCACT +
Preference number: 4 (lower is better)
Translates to: SLHFIPSVSFKSGWNSPPGKISD*TNSSLT
Trigger: AGTGAGGGAACTGTTCGTGCAGTCTGAAATTTTCCC...AGGTGGGCTATTCCAGCCACTTTTGAAGGACACTGAGGGTATAAAATGTAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTAATGGTCTTAGGAGATaGAAAGACGAAAAACTACTT +
Preference number: 4 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFNGLRR*KDEKLL
Trigger: AAGTAGTTTTTCGTCTTTGCATCTCCTAAGACCATT...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CAA 72 bp GAGACACTGAGGCCTCTTCAGTACATAAAAATAGGGTaGGAAGTTAGCATCTTGACACTCTTTGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: ETLRPLQYIKIG*EVSILTLFGGF
Trigger: GAATCCCCCAAAGAGTGTCAAGATGCTAACTTCCAACCCTATTTTTATGTACTGAAGAGGCCTCAGTGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTAAACGTGCCACAACCTTaGATCCATCAGCTACTTTGT +
Preference number: 4 (lower is better)
Translates to: LEHFLFHAENQKAWILALNVPQP*IHQLLC
Trigger: ACAAAGTAGCTGATGGATTCAAGGTTGTGGCACGTT...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CACTACACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTGGAGAACTCAGATGTaGTGTAGCTGCTCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: HYTRNVIEPVSSKEITETWRTQM*CSCSSN
Trigger: GTTACTGGAGCAGCTACATCACATCTGAGTTCTCCA...AGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGTGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACAACATAAACGTGTACTaGCACATGTTGGTAAGCATT +
Preference number: 4 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANNINVY*HMLVSI
Trigger: AATGCTTACCAACATGTGTCAGTACACGTTTATGTT...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATCCTCAGTGGCTCAGATaGAATACTGTGAAGGTACAG +
Preference number: 4 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDPQWLR*NTVKVQ
Trigger: CTGTACCTTCACAGTATTTCATCTGAGCCACTGAGG...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTATGGAAGTTAGCATCTTaGCACTCTTTGGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: LEHFLFHAENQKAWILALWKLAS*HSLGDS
Trigger: AGAATCCCCCAAAGAGTGTCAAGATGCTAACTTCCA...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATAAGGTTAGAGTTCAGTaGGACACTGAGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDKVRVQ*DTEASS
Trigger: TGAAGAGGCCTCAGTGTCTCACTGAACTCTAACCTT...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATTCTCACAGCAGAAGATaGCCCAAGTGGTCAAACCTT +
Preference number: 4 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDSHSRR*PKWSNL
Trigger: AAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGA...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACTTTAAGAGTCAACAATaGCACCATTACTGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANFKSQQ*HHYCCQ
Trigger: TTGACAGCAGTAATGGTGGCATTGTTGACTCTTAAA...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCTGGAGGGGAGTAGTGTaGGAAAGTGGTTATAACATT +
Preference number: 4 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVWRGVV*ESGYNI
Trigger: AATGTTATAACCACTTTCCCACACTACTCCCCTCCA...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACTTCCCCATTACATTCTaGATTTGGGTCAATGAAAGA +
Preference number: 4 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANFPITF*IWVNER
Trigger: TCTTTCATTGACCCAAATCCAGAATGTAATGGGGAA...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CACTACACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTGCAAGACCATCTCTATaGCCTGCATCTCTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: HYTRNVIEPVSSKEITETARPSL*PASLSY
Trigger: ATAGGAGAGAGATGCAGGCCATAGAGATGGTCTTGC...AGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGTGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CAA 72 bp AGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTaGGATTCTAGCTCTAGCTCCCAACAATTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: RAFPLPCRESES*DSSSSSQQLAV
Trigger: TACAGCTAATTGTTGGGAGCTAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CAA 72 bp CAAAAGATGTGCTTTCCAAGGGTGGAGACATCCAACTaGTATTCAGTTCCCCATTACATTCTGGATTTGGGT +
Preference number: 4 (lower is better)
Translates to: QKMCFPRVETSN*YSVPHYILDLG
Trigger: ACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGGATGTCTCCACCCTTGGAAAGCACATCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CACTACACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTGAATTCCAAGCTTTTTaGGGGCCTCTTCAACAGACT +
Preference number: 4 (lower is better)
Translates to: HYTRNVIEPVSSKEITETEFQAF*GPLQQT
Trigger: AGTCTGTTGAAGAGGCCCTCAAAAAGCTTGGAATTC...AGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGTGTAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CACTACACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTCAGAACCGTTTCTCTaGCCAGCAAAAGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: HYTRNVIEPVSSKEITETSEPFL*PAKEEM
Trigger: CATCTCTTCTTTTGCTGGTCAGAGAAACGGTTCTGA...AGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGTGTAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp AGCTTACATTTTATACCCTCAGTGTCCTTCAAAAGTGGCTGGAATAGCCCACCTCTGTTCACAGGTGTCTaGGCAATGAATAATATGTCT +
Preference number: 4 (lower is better)
Translates to: SLHFIPSVSFKSGWNSPPLFTGV*AMNNMS
Trigger: AGACATATTATTCATTGCTCAGACACCTGTGAACAG...AGGTGGGCTATTCCAGCCACTTTTGAAGGACACTGAGGGTATAAAATGTAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTATATGTTTCCAGAACGTaGCACAACCTTGAATCCATC +
Preference number: 4 (lower is better)
Translates to: LEHFLFHAENQKAWILALYVSRT*HNLESI
Trigger: GATGGATTCAAGGTTGTGGCACGTTCTGGAAACATA...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATGGACCTGGAAATGGATaGCTGGAAACTAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDGPGNG*LETNSS
Trigger: AGAAGAGTTAGTTTCCAGGCATCCATTTCCAGGTCC...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCTTCCTTTATAGCAAATaGTGGTGTTTCCAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: NLAIRPSARPSLWPASLSFLYSK*WCFQGE
Trigger: TTCCCCTTGGAAACACCAGCATTTGCTATAAAGGAA...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp GCAAAAGCAGTATCAATCTGTCTGAGTGTAGGCAATGGTGCTTTGATTATTTACCAGAAACTCTTCCCTTaGTGGTCCAGCAGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: AKAVSICLSVGNGALIIYQKLFP*WSSSSF
Trigger: AAAACTGCTGCTGGACCAGCAAGGGAAGAGTTTCTG...GTAAATAATCAAAGCACCATTGCCTACACTCAGACAGATTGATACTGCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATCAATGCCACCATTACTaGTGTCAAAGTCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDQCHHY*CQSPSV
Trigger: CACTGAAGGACTTTGACAGCAGTAATGGTGGCATTG...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACACCCTTGACACTATATaGAATTTCTTATGTCCCATA +
Preference number: 4 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANTLDTI*NFLCPI
Trigger: TATGGGACATAAGAAATTGCATATAGTGTCAAGGGT...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATTCCTTCAAAAGTGGCTaGAATAGCCCACCTATACCT +
Preference number: 4 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDSFKSG*NSPPIP
Trigger: AGGTATAGGTGGGCTATTCCAGCCACTTTTGAAGGA...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATAAACTCTTCCCTTGCTaGTCCAGCAGCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDKLFPC*SSSSFL
Trigger: AAGAAAACTGCTGCTGGACCAGCAAGGGAAGAGTTT...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACATTACATTCTGGATTTaGGTCAATGAAAGAAGCATC +
Preference number: 4 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANITFWI*VNERSI
Trigger: GATGCTTCTTTCATTGACCCAAATCCAGAATGTAAT...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
3UTR CAA 72 bp GCAGTATCAATCTGTCTGAGTGTAGGCAATGGTGCTTaGATTATTTACCCGTACAAACTCTTCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: AVSICLSVGNGA*IIYPYKLFSPF
Trigger: AAAGGGACTGAAGAGTTTGTACGGGTAAATAATCAAAGCACCATTGCCTACACTCAGACAGATTGATACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATCAATGTGCACAGCAATaGCTTGTTCTTGGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDQCAQQ*LVLGSK
Trigger: CTTTGAACCAAGAACAAGTCATTGCTGTGCACATTG...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp ACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTTCTATCACCAGCATCCAGAATaGCAACAGCTCCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: TRNVIEPVSSKEITETFYHQHPE*QQLLHS
Trigger: ACTATGAAGGAGCTGTTGTCATTCTGGATGCTGGTG...ATAGAAAGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCGCCAGAATAAAAAGATaGCTTCTGCCACGCATCATT +
Preference number: 4 (lower is better)
Translates to: PTCIQFPITFWIWVNERSARIKR*LLPRII
Trigger: AATGATGCGTGGCAGAAGTCATCTTTTTATTCTGGC...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp AGCTTACATTTTATACCCTCAGTGTCCTTCAAAAGTGGCTGGAATAGCCCACCTTCAGATGAAATACTGTaGAGGTACAGAGTAATGCTA +
Preference number: 4 (lower is better)
Translates to: SLHFIPSVSFKSGWNSPPSDEIL*RYRVML
Trigger: TAGCATTACTCTGTACCTTCACAGTATTTCATCTGA...AGGTGGGCTATTCCAGCCACTTTTGAAGGACACTGAGGGTATAAAATGTAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCACAGGATTTATGTGTTaGTGCAATAATAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVTGFMC*CNNSSV
Trigger: GACTGAGCTATTATTGCATCAACACATAAATCCTGT...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTAGAGTGTAGGCAATGGTaGTTTGATTATTTACCCGTA +
Preference number: 4 (lower is better)
Translates to: LEHFLFHAENQKAWILALECRQW*FDYLPV
Trigger: TACGGGTAAATAATCAAAGCACCATTGCCTACACTC...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp AGCTTACATTTTATACCCTCAGTGTCCTTCAAAAGTGGCTGGAATAGCCCACCTGTTTGGCAAACATCTTaGATGTATCAAGACTGTTCA +
Preference number: 4 (lower is better)
Translates to: SLHFIPSVSFKSGWNSPPVWQTS*MYQDCS
Trigger: TGAACAGTCTTGATACATGCAAGATGTTTGCCAAAC...AGGTGGGCTATTCCAGCCACTTTTGAAGGACACTGAGGGTATAAAATGTAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCAGCCTACACAGTTGTTaGCCAGATCTCAAAATTAGC +
Preference number: 4 (lower is better)
Translates to: PTCIQFPITFWIWVNERSSLHSC*PDLKIS
Trigger: GCTAATTTTGAGATCTGGGCAACAACTGTGTAGGCT...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp ACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTTCTATAGGCATGCGCCACTGTaGCTGGTCACAAATATGTTA +
Preference number: 4 (lower is better)
Translates to: TRNVIEPVSSKEITETFYRHAPL*LVTNML
Trigger: TAACATATTTGTGACCAGGCACAGTGGCGCATGCCT...ATAGAAAGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTAAAGGAAAACCTCCTCTaGTTTCAAGTTCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: LEHFLFHAENQKAWILALKENLL*FQVHFS
Trigger: GGAGAAATGAACTTGAAACCAGAGGAGGTTTTCCTT...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATCTGGAAATGGATGCCTaGAAACTAACTCTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDLEMDA*KLTLLE
Trigger: TTCCAGAAGAGTTAGTTTCCAGGCATCCATTTCCAG...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTAAATAGTGAATATTGCTaGATCAAACCAGGGAGCATC +
Preference number: 4 (lower is better)
Translates to: LEHFLFHAENQKAWILALNSEYC*IKPGSI
Trigger: GATGCTCCCTGGTTTGATCCAGCAATATTCACTATT...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCCAGAGTAATGCTATATaGCACAAAGCAAAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVQSNAI*HKAKSA
Trigger: AGCACTTTTTGCTTTGTGCCATATAGCATTACTCTG...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCGTTAGAAACTGGTGGTaGTGGCAACAAGTCCTACAC +
Preference number: 4 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTVRNWW*WQQVLH
Trigger: GTGTAGGACTTGTTGCCATCACCACCAGTTTCTAAC...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTATTCCCCAAACTTATATaGCCACCTAATCCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: LEHFLFHAENQKAWILALFPKLI*PPNPFY
Trigger: GTAAAAAGGATTAGGTGGTCATATAAGTTTGGGGAA...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCCCAGGAAAGGACAAGTaGGCTTATGTTCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTPGKDK*AYVPQT
Trigger: AGTTTGGGGAACATAAGCTCACTTGTCCTTTCCTGG...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCTGGCTTTCTCCTCTCTaGAGGAAAAGTAAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: PTCIQFPITFWIWVNERSWLSPL*RKSKEV
Trigger: TACTTCTTTACTTTTCCTTCAGAGAGGAGAAAGCCA...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CTAGAGCATTTCCTCTTCCATGCAGAGAATCAGAAAGCTTGGATTCTAGCTCTAGATATATACTCCACTTaGATAAGATACTGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LEHFLFHAENQKAWILALDIYST*IRYCSR
Trigger: CCTTGAGCAGTATCTTATTCAAGTGGAGTATATATC...TAGAGCTAGAATCCAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGCTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCTGTCATGTCAAGATGTaGTTTGGAGTAACAATTTTC +
Preference number: 4 (lower is better)
Translates to: NLAIRPSARPSLWPASLSCHVKM*FGVTIF
Trigger: GAAAATTGTTACTCCAAAGCACATCTTGACATGACA...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCCATCTTGACACTCTTTaGGGGATTCTATATCTCTTC +
Preference number: 4 (lower is better)
Translates to: PTCIQFPITFWIWVNERSHLDTL*GILYLF
Trigger: GAAGAGATATAGAATCCCCCAAAGAGTGTCAAGATG...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCTTCCTCCCAAGGCTGTaGAATAAAATTCAAAAGTAC +
Preference number: 4 (lower is better)
Translates to: PTCIQFPITFWIWVNERSFLPRL*NKIQKY
Trigger: GTACTTTTGAATTTTATTTCACAGCCTTGGGAGGAA...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCAGAACAGAAATGACTTaGCCAAGTTCACATTGTTGT +
Preference number: 4 (lower is better)
Translates to: PTCIQFPITFWIWVNERSRTEMT*PSSHCC
Trigger: ACAACAATGTGAACTTGGTCAAGTCATTTCTGTTCT...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp GCAAAAGCAGTATCAATCTGTCTGAGTGTAGGCAATGGTGCTTTGATTATTTACCTTTACGGTGCATTTTaGTGTTTCCCTTTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: AKAVSICLSVGNGALIIYLYGAF*CFPLCH
Trigger: ATGACACAAAGGGAAACATCAAAATGCACCGTAAAG...GTAAATAATCAAAGCACCATTGCCTACACTCAGACAGATTGATACTGCTTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCAAGCCATTATCAATGTaGACAGCAATGACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PTCIQFPITFWIWVNERSKPLSM*TAMTCS
Trigger: AGAACAAGTCATTGCTGTGCACATTGATAATGGCTT...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp GCAAAAGCAGTATCAATCTGTCTGAGTGTAGGCAATGGTGCTTTGATTATTTACAAGGCATTCAGTGAATaGAGACTGGTAATTTGCATC +
Preference number: 4 (lower is better)
Translates to: AKAVSICLSVGNGALIIYKAFSE*RLVICI
Trigger: GATGCAAATTACCAGTCTGCATTCACTGAATGCCTT...GTAAATAATCAAAGCACCATTGCCTACACTCAGACAGATTGATACTGCTTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCCTCTTTTCACAGTACTaGATGTCAATAATGGGAATG +
Preference number: 4 (lower is better)
Translates to: PTCIQFPITFWIWVNERSLFSQY*MSIMGM
Trigger: CATTCCCATTATTGACATGCAGTACTGTGAAAAGAG...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp ACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTTCTATGCATTTCCTCTTCCATaGAGAGAATCAGAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: TRNVIEPVSSKEITETFYAFPLP*RESESL
Trigger: CAAGCTTTCTGATTCTCTGCATGGAAGAGGAAATGC...ATAGAAAGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATAAACAAAACTGTAAATaGTTGAGTTCTACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDKQNCK*LSSTSS
Trigger: GGAGGAGGTAGAACTCAAGCATTTACAGTTTTGTTT...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CACTACACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTCTCTTCAGGACTTGTaGTCATATTTAACGTTTTGC +
Preference number: 4 (lower is better)
Translates to: HYTRNVIEPVSSKEITETSLQDL*SYLTFC
Trigger: GCAAAACGTTAAATATGACCACAAGTCCTGAAGAGA...AGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGTGTAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CACTACACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTGTAACCCTATCTCCTaGATATATCTACAGACTTGT +
Preference number: 4 (lower is better)
Translates to: HYTRNVIEPVSSKEITETCNPIS*IYLQTC
Trigger: ACAAGTCTGTAGATATATCCAGGAGATAGGGTTACA...AGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGTGTAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCGAGAATCAGAAAGCTTaGATTCTAGCTCTAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTENQKA*ILALAP
Trigger: GGGAGCTAGAGCTAGAATCCAAGCTTTCTGATTCTC...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCGAACGACAGTCACCCTaGACACCTACAGTTTTAATT +
Preference number: 4 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTERQSP*TPTVLI
Trigger: AATTAAAACTGTAGGTGTGCAGGGTGACTGTCGTTC...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCCCTTCTGAAGGCCCCTaGATAATGAACATGTATTAT +
Preference number: 4 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTPSEGP*IMNMYY
Trigger: ATAATACATGTTCATTATTCAGGGGCCTTCAGAAGG...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp ACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTTCTATACATCAACAAATTCCTaGTGCTTTTCCATCTTATGG +
Preference number: 4 (lower is better)
Translates to: TRNVIEPVSSKEITETFYTSTNS*CFSILW
Trigger: CCATAAGATGGAAAAGCACCAGGAATTTGTTGATGT...ATAGAAAGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR TCA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCCAGCATTTATCACTTTaGCCTGAATTCCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTQHLSL*PEFQAF
Trigger: AAAAGCTTGGAATTCAGGTCAAAGTGATAAATGCTG...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR GCA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCGCTTGTTTGACTAAATaGATGCAGTTTACCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTACLTK*MQFTSR
Trigger: TCTTGAGGTAAACTGCATGCATTTAGTCAAACAAGC...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CCA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCGCAGGACTGGGTATTTaGTTCTTAAAAATGATTCTG +
Preference number: 4 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTAGLGI*FLKMIL
Trigger: CAGAATCATTTTTAAGAACCAAATACCCAGTCCTGC...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS GCA 90 bp GGAGCCGCGGCGGTGACGGCGACAGTACGAGACGGGGCGGGAGGGTaGCGGAAGGGTCGGCGCCGCGGGCTGAGGTTGAGAAGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: GAAAVTATVRDGAGG*RKGRRRGLRLRRRP
Trigger: AGGCCTCCTTCTCAACCTCAGCCCGCGGCGCCGACCCTTCCGGCACCCTCCCGCCCCGTCTCGTACTGTCGCCGTCACCGCCGCGGCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7
CDS-3UTR CAA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTTGGGGTTTCACCATGTaGGCCACGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFWGFTM*ATLVSN
Trigger: GTTTGAGACCAGCGTGGCCAACATGGTGAAACCCCA...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp CCAACTTGTATTCAGTTCCCCATTACATTCTGGATTTGGGTCAATGAAAGAAGCCGCCGCGGGCTGAGGTaGAGAAGGAGGCCTGGTCGA +
Preference number: 5 (lower is better)
Translates to: PTCIQFPITFWIWVNERSRRGLR*RRRPGR
Trigger: TCGACCAGGCCTCCTTCTCAACCTCAGCCCGCGGCG...GCTTCTTTCATTGACCCAAATCCAGAATGTAATGGGGAACTGAATACAAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTGTTCAGCTTTGCCACTaGCAACAAGGGATGCACTTT +
Preference number: 5 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFVQLCH*QQGMHF
Trigger: AAAGTGCATCCCTTGTTGCAAGTGGCAAAGCTGAAC...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTGAGTCAAGTACCCCTTaGTCTTGGGGACAGATTTCT +
Preference number: 5 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFESSTP*SWGQIS
Trigger: AGAAATCTGTCCCCAAGACAAAGGGGTACTTGACTC...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp GCAAAAGCAGTATCAATCTGTCTGAGTGTAGGCAATGGTGCTTTGATTATTTACAGCTTGGAGTCTCCGTaGCACAGAGCCATCGGGGCC +
Preference number: 5 (lower is better)
Translates to: AKAVSICLSVGNGALIIYSLESP*HRAIGA
Trigger: GGCCCCGATGGCTCTGTGCAACGGAGACTCCAAGCT...GTAAATAATCAAAGCACCATTGCCTACACTCAGACAGATTGATACTGCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTGTGGAGACATCCAACTaGTATTCAGTTCCCCATTAC +
Preference number: 5 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFVETSN*YSVPHY
Trigger: GTAATGGGGAACTGAATACAAGTTGGATGTCTCCAC...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTATGAAAATGCTCCTCTaGACCTCTATCTGCACTACA +
Preference number: 5 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFMKMLL*TSICTT
Trigger: TGTAGTGCAGATAGAGGTCAAGAGGAGCATTTTCAT...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTGTAAGAAGAAAGAGGTaGAAAGAACAGCCTACACAG +
Preference number: 5 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFVRRKR*KEQPTQ
Trigger: CTGTGTAGGCTGTTCTTTCAACCTCTTTCTTCTTAC...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTCTGATATTGGTAGGGTaGTTGTTCCATTGTAGAAAG +
Preference number: 5 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFLILVG*LFHCRK
Trigger: CTTTCTACAATGGAACAACAACCCTACCAATATCAG...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACTTGATGAGTTCAGCTTaGCCACTTGCAACAAGGGAT +
Preference number: 5 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANLMSSA*PLATRD
Trigger: ATCCCTTGTTGCAAGTGGCAAAGCTGAACTCATCAA...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACATGCAGACTGGTAATTaGCATCAGCTTCTCCTGATC +
Preference number: 5 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANMQTGN*HQLLLI
Trigger: GATCAGGAGAAGCTGATGCAAATTACCAGTCTGCAT...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp CGCCCGGCCAAGAACTTCCTTTTAAGATTTGCCCTGAAGGGCCCTAGAGCATTTATTCCAAGAACAGGCTaGCCAATAGTGAATATTGCT +
Preference number: 5 (lower is better)
Translates to: RPAKNFLLRFALKGPRAFIPRTG*PIVNIA
Trigger: AGCAATATTCACTATTGGCAAGCCTGTTCTTGGAAT...AAATGCTCTAGGGCCCTTCAGGGCAAATCTTAAAAGGAAGTTCTTGGCCGGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATCCAGCAGCAGTTTTCTaGTTCCCTGGACCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDPAAVF*FPGPAR
Trigger: TCTGGCTGGTCCAGGGAACAAGAAAACTGCTGCTGG...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATATTGTGCCACTGCACTaGGGGACAGAGCGAGACTCT +
Preference number: 5 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDIVPLH*GTERDS
Trigger: AGAGTCTCGCTCTGTCCCCAAGTGCAGTGGCACAAT...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCGAACGTGCCACAACCTaGAATCCATCAGCTACTTTG +
Preference number: 5 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVERATT*NPSATL
Trigger: CAAAGTAGCTGATGGATTCAAGGTTGTGGCACGTTC...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCACTCTTCAGTCCCTTTaGGTTATCCCCAACTCAGCT +
Preference number: 5 (lower is better)
Translates to: NLAIRPSARPSLWPASLSTLQSL*VIPNSA
Trigger: AGCTGAGTTGGGGATAACCAAAAGGGACTGAAGAGT...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACAAAGTGGTTATAACATaGCGCAAGCAGATGTCAGAG +
Preference number: 5 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANKVVIT*RKQMSE
Trigger: CTCTGACATCTGCTTGCGCAATGTTATAACCACTTT...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACAATACGCATCCAGTGTaGAGGAACACTGACAAAAAG +
Preference number: 5 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANNTHPV*RNTDKK
Trigger: CTTTTTGTCAGTGTTCCTCAACACTGGATGCGTATT...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACCAAAACTGTAAATGCTaGAGTTCTACCTCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANQNCKC*SSTSSR
Trigger: TCTGGAGGAGGTAGAACTCAAGCATTTACAGTTTTG...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp TTTCAAGTGTCATCTCACAGCAGAAGATGCCCCAAGTGGTCAAACCTTGCCAACAATCCATCAGCTACTTaGTCTACACTATCTCCATGT +
Preference number: 5 (lower is better)
Translates to: FQVSSHSRRCPKWSNLANNPSAT*STLSPC
Trigger: ACATGGAGATAGTGTAGACAAAGTAGCTGATGGATT...GTTGGCAAGGTTTGACCACTTGGGGCATCTTCTGCTGTGAGATGACACTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCGTGCCTACTCTCTCTTaGATCTCTCGAATACACTCA +
Preference number: 5 (lower is better)
Translates to: NLAIRPSARPSLWPASLSVPTLS*ISRIHS
Trigger: TGAGTGTATTCGAGAGATCAAAGAGAGAGTAGGCAC...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCACACCAGAAACGTCATaGAGCCAGTTTCTTCTAAGG +
Preference number: 5 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVTPETS*SQFLLR
Trigger: CCTTAGAAGAAACTGGCTCAATGACGTTTCTGGTGT...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS CCA 90 bp GCAACAAGGGATGCACTTTCAATTAGATCAGGCCGTAAAGTACCTTaGGCAAGGAAAACCTCCTCTGGTTTCAAGTTCATTTCTCCAATT +
Preference number: 5 (lower is better)
Translates to: ATRDALSIRSGRKVP*ARKTSSGFKFISPI
Trigger: AATTGGAGAAATGAACTTGAAACCAGAGGAGGTTTTCCTTGCCCAAGGTACTTTACGGCCTGATCTAATTGAAAGTGCATCCCTTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7
CDS CCA 90 bp ACCATAGCAAATTCCAAGAACAGGCTTGCCAATAGTGAATATTGCTaGATCAAACCAGGGAGCATCTTCAGCATACACAGAATTAGGTCC +
Preference number: 5 (lower is better)
Translates to: TIANSKNRLANSEYC*IKPGSIFSIHRIRS
Trigger: GGACCTAATTCTGTGTATGCTGAAGATGCTCCCTGGTTTGATCCAGCAATATTCACTATTGGCAAGCCTGTTCTTGGAATTTGCTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476145.1
ENST00000496455.7
CDS-3UTR CAA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCCCAGCATTCTCCAGCTaGGAGTCTCCGTTGCACAGA +
Preference number: 5 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTPAFSS*ESPLHR
Trigger: TCTGTGCAACGGAGACTCCAAGCTGGAGAATGCTGG...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCTTAAGCCGTAGATTTTaGCTGTGGAGAACTCAGATG +
Preference number: 5 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVLSRRF*LWRTQM
Trigger: CATCTGAGTTCTCCACAGCAAAAATCTACGGCTTAA...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS GCA 90 bp CATACCATAGCAAATTCCAAGAACAGGCTTGCCAATAGTGAATATTaGTGGATCAAACCAGGGAGCATCTTCAGCATACACAGAATTAGG +
Preference number: 5 (lower is better)
Translates to: HTIANSKNRLANSEY*WIKPGSIFSIHRIR
Trigger: CCTAATTCTGTGTATGCTGAAGATGCTCCCTGGTTTGATCCAGCAATATTCACTATTGGCAAGCCTGTTCTTGGAATTTGCTATGGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476145.1
ENST00000496455.7
CDS GCA 90 bp TCCAGAGATGATAATAGCACGGAATCCTTGTTCCTTTATAGCAAATaGTGGTGTTTCCAAGGGGAAAATTTCAGACTGCACGAACAGTTC +
Preference number: 5 (lower is better)
Translates to: SRDDNSTESLFLYSK*WCFQGENFRLHEQF
Trigger: GAACTGTTCGTGCAGTCTGAAATTTTCCCCTTGGAAACACCAGCATTTGCTATAAAGGAACAAGGATTCCGTGCTATTATCATCTCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp AGCTTACATTTTATACCCTCAGTGTCCTTCAAAAGTGGCTGGAATAGCCCACCTAATAGCACGGAATCCTaGTTCCTTTATAGCAAATGC +
Preference number: 5 (lower is better)
Translates to: SLHFIPSVSFKSGWNSPPNSTES*FLYSKC
Trigger: GCATTTGCTATAAAGGAACAAGGATTCCGTGCTATT...AGGTGGGCTATTCCAGCCACTTTTGAAGGACACTGAGGGTATAAAATGTAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp AATTTAGCTATAAGACCTTCAGCAAGACCATCTCTATGGCCTGCATCTCTCTCCAGTTTGGCAAACATCTaGCATGTATCAAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: NLAIRPSARPSLWPASLSSLANI*HVSRLF
Trigger: GAACAGTCTTGATACATGCAAGATGTTTGCCAAACT...GGAGAGAGATGCAGGCCATAGAGATGGTCTTGCTGAAGGTCTTATAGCTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCTTGACCAAGTTCACATaGTTGTTTAACGGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVLTKFT*LFNGRK
Trigger: TTTCCTGCCGTTAAACAACAATGTGAACTTGGTCAA...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp AGCAACAAGTATGTCAGCTGTCCTAATTATTACCAAACAGGTCCTGGGAGTGTCTCTATATCTCTTCACTaGCCATTAAGTGAAACGTTC +
Preference number: 5 (lower is better)
Translates to: SNKYVSCPNYYQTGPGSVSISLH*PLSETF
Trigger: GAACGTTTCACTTAATGGCAAGTGAAGAGATATAGA...GACACTCCCAGGACCTGTTTGGTAATAATTAGGACAGCTGACATACTTGTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp ACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTTCTATTCTGTTGTGCAGGCTTaGACTCTCTGTAATAGGGTA +
Preference number: 5 (lower is better)
Translates to: TRNVIEPVSSKEITETFYSVVQA*TLCNRV
Trigger: TACCCTATTACAGAGAGTCAAAGCCTGCACAACAGA...ATAGAAAGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATTCCTGCCTTCCTAATTaGAATGCTCTTATTCTCTAC +
Preference number: 5 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDSCLPN*NALILY
Trigger: GTAGAGAATAAGAGCATTCAAATTAGGAAGGCAGGA...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS GCA 90 bp TCAACAGACTGGCTTTCTCGTTTTCTCATAAAGCCATTATCAATGTaGACAGCAATGACTTGTTCTTGGTTCAAAGCACGATTTAGCAAA +
Preference number: 5 (lower is better)
Translates to: STDWLSRFLIKPLSM*TAMTCSWFKARFSK
Trigger: TTTGCTAAATCGTGCTTTGAACCAAGAACAAGTCATTGCTGTGCACATTGATAATGGCTTTATGAGAAAACGAGAAAGCCAGTCTGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7
CDS-3UTR CAA 90 bp GCAAAAGCAGTATCAATCTGTCTGAGTGTAGGCAATGGTGCTTTGATTATTTACGTAAAACCAAAACTTTaGACGTGCCTACTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: AKAVSICLSVGNGALIIYVKPKL*TCLLSL
Trigger: AAGAGAGAGTAGGCACGTCAAAAGTTTTGGTTTTAC...GTAAATAATCAAAGCACCATTGCCTACACTCAGACAGATTGATACTGCTTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp TCTGACACACAACATAATATAGGTGCAATCAGTTCCAGAATCTGGTTCCTGGATTATCTTCATCTGATATaGGTAGGGTTGTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: SDTQHNIGAISSRIWFLDYLHLI*VGLLFH
Trigger: ATGGAACAACAACCCTACCAATATCAGATGAAGATA...ATCCAGGAACCAGATTCTGGAACTGATTGCACCTATATTATGTTGTGTGTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp CACTACACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTAAGAACAGAAATGACTaGACCAAGTTCACATTGTTG +
Preference number: 5 (lower is better)
Translates to: HYTRNVIEPVSSKEITETKNRND*TKFTLL
Trigger: CAACAATGTGAACTTGGTCAAGTCATTTCTGTTCTT...AGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGTGTAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp GCAAAAGCAGTATCAATCTGTCTGAGTGTAGGCAATGGTGCTTTGATTATTTACCTTGGCTCTTACTTCTaGGAATTTCTCATAAACACG +
Preference number: 5 (lower is better)
Translates to: AKAVSICLSVGNGALIIYLGSYF*EFLINT
Trigger: CGTGTTTATGAGAAATTCCAAGAAGTAAGAGCCAAG...GTAAATAATCAAAGCACCATTGCCTACACTCAGACAGATTGATACTGCTTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp ACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTTCTATGTAGGCAATGGTGCTTaGATTATTTACCCGTACAAA +
Preference number: 5 (lower is better)
Translates to: TRNVIEPVSSKEITETFYVGNGA*IIYPYK
Trigger: TTTGTACGGGTAAATAATCAAAGCACCATTGCCTAC...ATAGAAAGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCCCTACCAGGAAAACTTaGATGGGTGTTTTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTPTRKT*MGVFQV
Trigger: CACTTGAAAAACACCCATCAAAGTTTTCCTGGTAGG...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp ACCAGAAACGTCATTGAGCCAGTTTCTTCTAAGGAGATAACAGAAACTTTCTATTTATCCACACTAATGTaGAAAACTCCATCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: TRNVIEPVSSKEITETFYLSTLM*KTPSSL
Trigger: CAGAGAAGATGGAGTTTTCAACATTAGTGTGGATAA...ATAGAAAGTTTCTGTTATCTCCTTAGAAGAAACTGGCTCAATGACGTTTCTGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS-3UTR CAA 90 bp CTAAACTTTCATAATTTTGCTAACCAAGGGCCCTTAACAAAGTTAAAAGACACCATAATATCTGTCCTCTaGGCTCTTACTTCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: LNFHNFANQGPLTKLKDTIISVL*ALTSWN
Trigger: ATTCCAAGAAGTAAGAGCCAAGAGGACAGATATTAT...GGTGTCTTTTAACTTTGTTAAGGGCCCTTGGTTAGCAAAATTATGAAAGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS GCA 72 bp GCGGTGACGGCGACAGTACGAGACGGGGCGGGAGGGTaGCGGAAGGGTCGGCGCCGCGGGCTGAGGTTGAGA +
Preference number: 6 (lower is better)
Translates to: AVTATVRDGAGG*RKGRRRGLRLR
Trigger: TCTCAACCTCAGCCCGCGGCGCCGACCCTTCCGGCACCCTCCCGCCCCGTCTCGTACTGTCGCCGTCACCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7
CDS CCA 72 bp CAGCGGAGAGGAGCCAGCCGCCAGAAAAGCGCCGAATaGAGCAACAGCAGCGGAGCGCGGGCCCCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: QRRGASRQKSAE*SNSSGARAPAP
Trigger: CGGCGCTGGGGCCCGCGCTCCGCTGCTGTTGCTCCATTCGGCGCTTTTCTGGCGGCTGGCTCCTCTCCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7
CDS GCA 72 bp GGTCTCCTCCAGCATTCTCCAGCTTGGAGTCTCCGTTaGACAGAGCCATCGGGGCCAGGGCCGGAGCCGCGG +
Preference number: 6 (lower is better)
Translates to: GLLQHSPAWSLR*TEPSGPGPEPR
Trigger: CCGCGGCTCCGGCCCTGGCCCCGATGGCTCTGTGCAACGGAGACTCCAAGCTGGAGAATGCTGGAGGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS TCA 72 bp CCTTACAAATATAAGGTTCTTCAGCACATATTACTCTaGTTGCCAGGCCAGGACCTGGAAATGGATGCCTGG +
Preference number: 6 (lower is better)
Translates to: PYKYKVLQHILL*LPGQDLEMDAW
Trigger: CCAGGCATCCATTTCCAGGTCCTGGCCTGGCAATCAGAGTAATATGTGCTGAAGAACCTTATATTTGTAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7
CDS TCA 72 bp TGCCTGCTACTATGTTTCCAGAACGTGCCACAACCTTaGATCCATCAGCTACTTTGTCTACACTATCTCCAT +
Preference number: 6 (lower is better)
Translates to: CLLLCFQNVPQP*IHQLLCLHYLH
Trigger: ATGGAGATAGTGTAGACAAAGTAGCTGATGGATTCAAGGTTGTGGCACGTTCTGGAAACATAGTAGCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295920.7
ENST00000476145.1
ENST00000496455.7
CDS TCA 72 bp TCCTCTCTCAACTTTCTGATGAGCTCTGTGTCATTGTaGTGGGTTTTGATGAGTTCAGCTTTGCCACTTGCA +
Preference number: 6 (lower is better)
Translates to: SSLNFLMSSVSL*WVLMSSALPLA
Trigger: TGCAAGTGGCAAAGCTGAACTCATCAAAACCCATCACAATGACACAGAGCTCATCAGAAAGTTGAGAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7
CDS GCA 72 bp TCTTTGATCTCTCGAATACACTCAAGTTCTCTGTTCTaGACGGTGAAGGTTCCACTGCATCCAGCTATATCA +
Preference number: 6 (lower is better)
Translates to: SLISRIHSSSLF*TVKVPLHPAIS
Trigger: TGATATAGCTGGATGCAGTGGAACCTTCACCGTGCAGAACAGAGAACTTGAGTGTATTCGAGAGATCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7
CDS GCA 72 bp ACAAATATAAGGTTCTTCAGCACATATTACTCTGATTaGCAGGCCAGGACCTGGAAATGGATGCCTGGAAAC +
Preference number: 6 (lower is better)
Translates to: TNIRFFSTYYSD*QARTWKWMPGN
Trigger: GTTTCCAGGCATCCATTTCCAGGTCCTGGCCTGGCAATCAGAGTAATATGTGCTGAAGAACCTTATATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7
CDS CAA 72 bp ATGCCTGCTACTATGTTTCCAGAACGTGCCACAACCTaGAATCCATCAGCTACTTTGTCTACACTATCTCCA +
Preference number: 6 (lower is better)
Translates to: MPATMFPERATT*NPSATLSTLSP
Trigger: TGGAGATAGTGTAGACAAAGTAGCTGATGGATTCAAGGTTGTGGCACGTTCTGGAAACATAGTAGCAGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295920.7
ENST00000476145.1
ENST00000496455.7
CDS CAA 90 bp TCATTTGCTATGCCTGCTACTATGTTTCCAGAACGTGCCACAACCTaGAATCCATCAGCTACTTTGTCTACACTATCTCCATGTGTAAGC +
Preference number: 6 (lower is better)
Translates to: SFAMPATMFPERATT*NPSATLSTLSPCVS
Trigger: GCTTACACATGGAGATAGTGTAGACAAAGTAGCTGATGGATTCAAGGTTGTGGCACGTTCTGGAAACATAGTAGCAGGCATAGCAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295920.7
ENST00000476145.1
ENST00000496455.7
CDS GCA 72 bp TTCATTTGCTATGCCTGCTACTATGTTTCCAGAACGTaGCACAACCTTGAATCCATCAGCTACTTTGTCTAC +
Preference number: 6 (lower is better)
Translates to: FICYACYYVSRT*HNLESISYFVY
Trigger: GTAGACAAAGTAGCTGATGGATTCAAGGTTGTGGCACGTTCTGGAAACATAGTAGCAGGCATAGCAAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295920.7
ENST00000476145.1
ENST00000496455.7
CDS CCA 72 bp GATGCACTTTCAATTAGATCAGGCCGTAAAGTACCTTaGGCAAGGAAAACCTCCTCTGGTTTCAAGTTCATT +
Preference number: 6 (lower is better)
Translates to: DALSIRSGRKVP*ARKTSSGFKFI
Trigger: AATGAACTTGAAACCAGAGGAGGTTTTCCTTGCCCAAGGTACTTTACGGCCTGATCTAATTGAAAGTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7
CDS CAA 72 bp CCAGAACGTGCCACAACCTTGAATCCATCAGCTACTTaGTCTACACTATCTCCATGTGTAAGCAAAACAACT +
Preference number: 6 (lower is better)
Translates to: PERATTLNPSAT*STLSPCVSKTT
Trigger: AGTTGTTTTGCTTACACATGGAGATAGTGTAGACAAAGTAGCTGATGGATTCAAGGTTGTGGCACGTTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295920.7
ENST00000476145.1
ENST00000496455.7
CDS GCA 72 bp GATAATAGCACGGAATCCTTGTTCCTTTATAGCAAATaGTGGTGTTTCCAAGGGGAAAATTTCAGACTGCAC +
Preference number: 6 (lower is better)
Translates to: DNSTESLFLYSK*WCFQGENFRLH
Trigger: GTGCAGTCTGAAATTTTCCCCTTGGAAACACCAGCATTTGCTATAAAGGAACAAGGATTCCGTGCTATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496455.7
CDS CAA 90 bp ACTATGTTTCCAGAACGTGCCACAACCTTGAATCCATCAGCTACTTaGTCTACACTATCTCCATGTGTAAGCAAAACAACTTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: TMFPERATTLNPSAT*STLSPCVSKTTSSF
Trigger: GAAGGAAGAAGTTGTTTTGCTTACACATGGAGATAGTGTAGACAAAGTAGCTGATGGATTCAAGGTTGTGGCACGTTCTGGAAACATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295920.7
ENST00000476145.1
ENST00000496455.7
CDS GCA 72 bp TGGCTTTCTCGTTTTCTCATAAAGCCATTATCAATGTaGACAGCAATGACTTGTTCTTGGTTCAAAGCACGA +
Preference number: 6 (lower is better)
Translates to: WLSRFLIKPLSM*TAMTCSWFKAR
Trigger: TCGTGCTTTGAACCAAGAACAAGTCATTGCTGTGCACATTGATAATGGCTTTATGAGAAAACGAGAAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7
CDS CAA 72 bp TCCGTGGGGTTCTATCTTCATCTGATATTGGTAGGGTaGTTGTTCCATTGTAGAAAGAATGAGCAGCATTTA +
Preference number: 6 (lower is better)
Translates to: SVGFYLHLILVG*LFHCRKNEQHL
Trigger: TAAATGCTGCTCATTCTTTCTACAATGGAACAACAACCCTACCAATATCAGATGAAGATAGAACCCCACGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7
CDS CCA 72 bp AAGCCATTATCAATGTGCACAGCAATGACTTGTTCTTaGTTCAAAGCACGATTTAGCAAAGCTGTACAAACT +
Preference number: 6 (lower is better)
Translates to: KPLSMCTAMTCS*FKARFSKAVQT
Trigger: AGTTTGTACAGCTTTGCTAAATCGTGCTTTGAACCAAGAACAAGTCATTGCTGTGCACATTGATAATGGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295920.7
ENST00000496455.7