RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLT1D1 (Homo sapiens)

Ensembl gene IDs: ENSG00000151948

Ensembl transcript IDs: ENST00000281703.11, ENST00000413816.6, ENST00000441390.6, ENST00000442111.6, ENST00000537468.1, ENST00000539044.5

Found 589 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTaGCCTCGCTGTGTGGCTGCAAAGCCCTGCAGACCCAAGCTCCAT +
Preference number: 1 (lower is better)
Translates to: WGEATITMMARLAPD*PRCVAAKPCRPKLH
Trigger: ATGGAGCTTGGGTCTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR CCA 90 bp TGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTaGGAAGGGGAAGAGCCCACCCTGGACCCAAAGCCTCAGGCCTCC +
Preference number: 1 (lower is better)
Translates to: WRLVTLPTSIPGSLM*EGEEPTLDPKPQAS
Trigger: GGAGGCCTGAGGCTTTGGGTCCAGGGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR GCA 90 bp TACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTaGAAAGCCCTGCAGACCCAAGCTCCATCCTGCCAAAGGCTGGAG +
Preference number: 1 (lower is better)
Translates to: YHDGAAGPGLTSLCG*KALQTQAPSCQRLE
Trigger: CTCCAGCCTTTGGCAGGATGGAGCTTGGGTCTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR GCA 90 bp ACCTCGCTGTGTGGCTGCAAAGCCCTGCAGACCCAAGCTCCATCCTaGCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGG +
Preference number: 1 (lower is better)
Translates to: TSLCGCKALQTQAPS*QRLEAGDPSDIHPR
Trigger: CCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGTCTGCAGGGCTTTGCAGCCACACAGCGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR CCA 90 bp GTGGCTGCAAAGCCCTGCAGACCCAAGCTCCATCCTGCCAAAGGCTaGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATG +
Preference number: 1 (lower is better)
Translates to: VAAKPCRPKLHPAKG*RLVTLPTSIPGSLM
Trigger: CATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGTCTGCAGGGCTTTGCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR CCA 90 bp GCGGGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTaGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGGGCCTGCGG +
Preference number: 1 (lower is better)
Translates to: AGDLQAMRDVALVPS*FSTQIQPRGGRGLR
Trigger: CCGCAGGCCCCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR GCA 90 bp GGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTaGAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCA +
Preference number: 1 (lower is better)
Translates to: GPKASGLHLRVTRAI*RLCVTWRLFLPGFP
Trigger: TGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR TCA 90 bp GCACCTCCATCAGGACTGGCTGGTGAACACGCCTGGGACAGCATCTaGACGCACAGAAGGATATGGGATGAATGCAGTGGCTCTGGGGAC +
Preference number: 1 (lower is better)
Translates to: APPSGLAGEHAWDSI*THRRIWDECSGSGD
Trigger: GTCCCCAGAGCCACTGCATTCATCCCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGCGTGTTCACCAGCCAGTCCTGATGGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR TCA 90 bp CAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTATGCGTaGCGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCC +
Preference number: 1 (lower is better)
Translates to: QASISGSRGRFAGYA*RGACSFLVFHSNSA
Trigger: GGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR GCA 90 bp GCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTATaGGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTC +
Preference number: 1 (lower is better)
Translates to: ASGLHLRVTRAICRL*VTWRLFLPGFPLKF
Trigger: GAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR TCA 90 bp CCCAGTCAACCCAGTCACTCATGCACCTCCATCAGGACTGGCTGGTaGACACGCCTGGGACAGCATCTGAACGCACAGAAGGATATGGGA +
Preference number: 1 (lower is better)
Translates to: PSQPSHSCTSIRTGW*TRLGQHLNAQKDMG
Trigger: TCCCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGCGTGTTCACCAGCCAGTCCTGATGGAGGTGCATGAGTGACTGGGTTGACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR CCA 90 bp CTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTATGCGTGACGTaGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAG +
Preference number: 1 (lower is better)
Translates to: LHLRVTRAICRLCVT*RLFLPGFPLKFSQE
Trigger: CTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR TCA 90 bp TTCACCACCGCGAAGCAATTCTTCACCACCGCGTGCAGATCTTCTTaGGGCATCTCTCCAATCAATCGTACCCCAGCGGCTCTGAAACAC +
Preference number: 1 (lower is better)
Translates to: FTTAKQFFTTACRSS*GISPINRTPAALKH
Trigger: GTGTTTCAGAGCCGCTGGGGTACGATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGCGGTGGTGAAGAATTGCTTCGCGGTGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR CCA 90 bp CAGCTGACACGTCTGTTTTGCTTTTGCCTTTCAAACTGGCAACGATaGGGAGAGGTTGGTCAGAAGGCAGGCGGGAGGAGTCTGAACCAT +
Preference number: 1 (lower is better)
Translates to: QLTRLFCFCLSNWQR*GEVGQKAGGRSLNH
Trigger: ATGGTTCAGACTCCTCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAAGCAAAACAGACGTGTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR TCA 90 bp GCACAACTTTCAATTCCACCATTGAAAAGTGAGCTGTGCCGGGCGTaGGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGT +
Preference number: 1 (lower is better)
Translates to: AQLSIPPLKSELCRA*AHSQRFLVFREASG
Trigger: ACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTCACTTTTCAATGGTGGAATTGAAAGTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR TCA 90 bp TTGCCAGATGAACAAACTCCTGAGGATTGGAAAACAGTAGCCCTGTaGCTTCATGCTTCACCACGGCAGCATTCCCGGGGATGTTCCTGG +
Preference number: 1 (lower is better)
Translates to: LPDEQTPEDWKTVAL*LHASPRQHSRGCSW
Trigger: CCAGGAACATCCCCGGGAATGCTGCCGTGGTGAAGCATGAAGTCACAGGGCTACTGTTTTCCAATCCTCAGGAGTTTGTTCATCTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR TCA 90 bp TTCACCACCGCGAAGCAATTCTTCACCACCGCGTGCAGATCTTCTTaGGGCATCTCTCCAATCAATCGTACCCCAGCGGCTCTTTTCACT +
Preference number: 1 (lower is better)
Translates to: FTTAKQFFTTACRSS*GISPINRTPAALFT
Trigger: AGTGAAAAGAGCCGCTGGGGTACGATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGCGGTGGTGAAGAATTGCTTCGCGGTGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441390.6
3UTR GCA 90 bp GGAGAGGTTGGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTaGTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCA +
Preference number: 1 (lower is better)
Translates to: GEVGQKAGGRSLNHD*LKISLYCPHQSPKA
Trigger: TGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACCAACCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR TCA 90 bp CAGCCTGGCCACTTTTCTAAAAAGCACAACTTTCAATTCCACCATTaGAAAGTGAGCTGTGCCGGGCGTGAGCTCACTCACAGCGCTTTC +
Preference number: 1 (lower is better)
Translates to: QPGHFSKKHNFQFHH*KVSCAGRELTHSAF
Trigger: GAAAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTCACTTTTCAATGGTGGAATTGAAAGTTGTGCTTTTTAGAAAAGTGGCCAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR TCA 90 bp CAGCTTCCTGATGAGCTGTTGGTAGGTGTCTCTTTCCACCTGCCATaGATGATACATTCTCACGTATTCCCTTCCGTTCACTACGATTTC +
Preference number: 1 (lower is better)
Translates to: QLPDELLVGVSFHLP*MIHSHVFPSVHYDF
Trigger: GAAATCGTAGTGAACGGAAGGGAATACGTGAGAATGTATCATTCATGGCAGGTGGAAAGAGACACCTACCAACAGCTCATCAGGAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR TCA 90 bp TACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCCGGCTGGCCCCGGACTaGCCTCGCTGTGTGGCTGCA +
Preference number: 2 (lower is better)
Translates to: YHDGAAGPGLTSLCGCKARLAPD*PRCVAA
Trigger: TGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCG...GGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp TACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCCCATCCCCGGGTCCCTaGTGTGGGAAGGGGAAGAGC +
Preference number: 2 (lower is better)
Translates to: YHDGAAGPGLTSLCGCKAPSPGP*CGKGKS
Trigger: GCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGG...GGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGAGGCCACCATTACCATaGTGGCGCGGCTGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: LEAGDPSDIHPRVPDVGRRPPLP*WRGWPR
Trigger: CCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCT...CCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp TACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCGAGCTGTGCCGGGCGTaGGCTCACTCACAGCGCTTT +
Preference number: 2 (lower is better)
Translates to: YHDGAAGPGLTSLCGCKAELCRA*AHSQRF
Trigger: AAAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTC...GGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCCTGCAGTCCACCATTGAAAAGTaGGCTGTGCCGGGCGTGAGC +
Preference number: 2 (lower is better)
Translates to: DGAAGPGLTSLCGCKALQSTIEK*AVPGVS
Trigger: GCTCACGCCCGGCACAGCTCACTTTTCAATGGTGGA...CTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGGTCACGCGGGCGATTTaGAGGCTATGCGTGACGTGG +
Preference number: 2 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSVTRAI*RLCVTW
Trigger: CCACGTCACGCATAGCCTGCAAATCGCCCGCGTGAC...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp CATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCCCGGGTCCCTGATGTaGGAAGGGGAAGAGCCCACC +
Preference number: 2 (lower is better)
Translates to: HPAKGWRLVTLPTSIPGSPGSLM*EGEEPT
Trigger: GGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGG...GGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCCTGCAGCCAGAACTCTGTCTCTaGGTGTGCACCCAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: DGAAGPGLTSLCGCKALQPELCL*VCTQSC
Trigger: ACAGCTCTGGGTGCACACTCAGAGACAGAGTTCTGG...CTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCCTGCAGCAGAAGGATATGGGATaGATGCAGTGGCTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: DGAAGPGLTSLCGCKALQQKDMG*MQWLWG
Trigger: TCCCCAGAGCCACTGCATTCATCCCATATCCTTCTG...CTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGGAGGCTGGTTTTATTTaGACTGCACTGGGCCCACGT +
Preference number: 2 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSEAGFI*TALGPR
Trigger: ACGTGGGCCCAGTGCAGTTCAAATAAAACCAGCCTC...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp TTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGACGGCTGGCCCCGGACTaGCCTCGCTGTGTGGCTGCA +
Preference number: 2 (lower is better)
Translates to: FAFQTGNDGERLVRRQAGRLAPD*PRCVAA
Trigger: TGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCG...TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp GATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCCTGCAGAGGATATGGGATGAATaGAGTGGCTCTGGGGACTCA +
Preference number: 2 (lower is better)
Translates to: DGAAGPGLTSLCGCKALQRIWDE*SGSGDS
Trigger: TGAGTCCCCAGAGCCACTGCATTCATCCCATATCCT...CTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp TACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCGAGGCTGGTTTTATTTaGACTGCACTGGGCCCACGT +
Preference number: 2 (lower is better)
Translates to: YHDGAAGPGLTSLCGCKAEAGFI*TALGPR
Trigger: ACGTGGGCCCAGTGCAGTTCAAATAAAACCAGCCTC...GGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAGCCCACCCTGGCCTGGGACAGCATCTaGACGCACAGAAGGATATGG +
Preference number: 2 (lower is better)
Translates to: LPTSIPGSLMWEGEEPTLAWDSI*THRRIW
Trigger: CCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGC...CAGGGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATGAGCTGTGCCGGGCGTaGGCTCACTCACAGCGCTTT +
Preference number: 2 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHELCRA*AHSQRF
Trigger: AAAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTC...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGTCAAACTGGCAACGATaGGGAGAGGTTGGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSSNWQR*GEVGQK
Trigger: CTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGA...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGCCCGGGTCCCTGATGTaGGAAGGGGAAGAGCCCACC +
Preference number: 2 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTPGSLM*EGEEPT
Trigger: GGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGG...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR CAA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTaGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCC +
Preference number: 2 (lower is better)
Translates to: WTQSLRPPSQGHAGD*QAMRDVALVPSWFS
Trigger: GGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGCAGAAGGATATGGGATaGATGCAGTGGCTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: LEAGDPSDIHPRVPDVGRQKDMG*MQWLWG
Trigger: TCCCCAGAGCCACTGCATTCATCCCATATCCTTCTG...CCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCGAGCTGTGCCGGGCGTaGGCTCACTCACAGCGCTTT +
Preference number: 2 (lower is better)
Translates to: LVFREASGHPRACQSPEIELCRA*AHSQRF
Trigger: AAAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTC...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp GTCACGCGGGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTCCACCATTGAAAAGTaGGCTGTGCCGGGCGTGAGC +
Preference number: 2 (lower is better)
Translates to: VTRAICRLCVTWRLFLPGSTIEK*AVPGVS
Trigger: GCTCACGCCCGGCACAGCTCACTTTTCAATGGTGGA...ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACACCATCCCCGGGTCCCTaGTGTGGGAAGGGGAAGAGC +
Preference number: 2 (lower is better)
Translates to: FREASGHPRACQSPEITTPSPGP*CGKGKS
Trigger: GCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGG...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp CCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGTCACAACAAAAATCCTaGGAGGACTCGGCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: PAKGWRLVTLPTSIPGSLSQQKS*EDSAQL
Trigger: CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGA...CAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTGCGATTTGCAGGCTATaGGTGACGTGGCGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: WTQSLRPPSQGHAGDLQAAICRL*VTWRLF
Trigger: GAACAAGCGCCACGTCACGCATAGCCTGCAAATCGC...AGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp GCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAGCGATTTGCAGGCTATaGGTGACGTGGCGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: AGDPSDIHPRVPDVGRGRAICRL*VTWRLF
Trigger: GAACAAGCGCCACGTCACGCATAGCCTGCAAATCGC...TCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GGCGTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCATCAGGACTGGCTGGTaGACACGCCTGGGACAGCAT +
Preference number: 2 (lower is better)
Translates to: GVSSLTALSSVQRSLGSPIRTGW*TRLGQH
Trigger: ATGCTGTCCCAGGCGTGTTCACCAGCCAGTCCTGAT...GGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACAGAGCTGTGCCGGGCGTaGGCTCACTCACAGCGCTTT +
Preference number: 2 (lower is better)
Translates to: FREASGHPRACQSPEITTELCRA*AHSQRF
Trigger: AAAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTC...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp CCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGTTTCAATTCCACCATTaGAAAGTGAGCTGTGCCGGG +
Preference number: 2 (lower is better)
Translates to: PAKGWRLVTLPTSIPGSLFQFHH*KVSCAG
Trigger: CCCGGCACAGCTCACTTTTCAATGGTGGAATTGAAA...CAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CCTGTCAGAGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGCCATCCCCGGGTCCCTaGTGTGGGAAGGGGAAGAGC +
Preference number: 2 (lower is better)
Translates to: PVRVLRSQQKSCEDSAQLPSPGP*CGKGKS
Trigger: GCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGG...CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACTCTGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGAAGGCTGGAGGCTGGTaGCCCTTCCGACATCCATCC +
Preference number: 2 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTKAGGW*PFRHPS
Trigger: GGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTT...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCAAGGCTGGAGGCTGGTaGCCCTTCCGACATCCATCC +
Preference number: 2 (lower is better)
Translates to: LVFREASGHPRACQSPEIKAGGW*PFRHPS
Trigger: GGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTT...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCCTGCAGCAGGAAGAGTGGCTCTaGTTCCAAGAATTTACTTCA +
Preference number: 2 (lower is better)
Translates to: DGAAGPGLTSLCGCKALQQEEWL*FQEFTS
Trigger: TGAAGTAAATTCTTGGAATCAGAGCCACTCTTCCTG...CTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR-3UTR GCA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATACCCAAGCTCCATCCTaGCAAAGGCTGGAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHTQAPS*QRLEAG
Trigger: ACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp CCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCAGGCTATGCGTGACGTaGCGCTTGTTCCTTCCTGGT +
Preference number: 2 (lower is better)
Translates to: PKLHPAKGWRLVTLPTSIRLCVT*RLFLPG
Trigger: ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCT...GATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp TTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGAGGGAAGAGCCCACCCTaGACCCAAAGCCTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: FAFQTGNDGERLVRRQAGGKSPP*TQSLRP
Trigger: AGGCCTGAGGCTTTGGGTCCAGGGTGGGCTCTTCCC...TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATACTGACCTCGCTGTGTaGCTGCAAAGCCCTGCAGAC +
Preference number: 2 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHTDLAV*LQSPAD
Trigger: GTCTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGT...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR CAA 90 bp CTCAGGGTCACGCGGGCGATTTGCAGGCTATGCGTGACGTGGCGCTaGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: LRVTRAICRLCVTWR*FLPGFPLKFSQEVG
Trigger: GCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GTCACGCGGGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTGAGGCTGGTTTTATTTaGACTGCACTGGGCCCACGT +
Preference number: 2 (lower is better)
Translates to: VTRAICRLCVTWRLFLPGEAGFI*TALGPR
Trigger: ACGTGGGCCCAGTGCAGTTCAAATAAAACCAGCCTC...ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GGCGTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCGCCTGGGACAGCATCTaGACGCACAGAAGGATATGG +
Preference number: 2 (lower is better)
Translates to: GVSSLTALSSVQRSLGSPAWDSI*THRRIW
Trigger: CCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGC...GGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp CCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGGAGGAGTCTGAACCATaGCTGCTTGAAAATAAGCCT +
Preference number: 2 (lower is better)
Translates to: PAKGWRLVTLPTSIPGSLEESEP*LLENKP
Trigger: AGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTC...CAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTAGGACTCGGCTCAGCTaGCACGTCTGTTTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: WTQSLRPPSQGHAGDLQARTRLS*HVCFAF
Trigger: AAAAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCT...AGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGTGCCTGTCAGAGTCCTaGGATCACAACAAAAATCCT +
Preference number: 2 (lower is better)
Translates to: PAKGWRLVTLPTSIPGSLCLSES*DHNKNP
Trigger: AGGATTTTTGTTGTGATCTCAGGACTCTGACAGGCA...CAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCGTACCCCAGCGGCTCTaGAACACAAAGCAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: ALSSVQRSLGSPTCLSESVPQRL*NTKQEE
Trigger: CTCTTCCTGCTTTGTGTTTCAGAGCCGCTGGGGTAC...GGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR-3UTR GCA 90 bp GGCGTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCGCGATTTGCAGGCTATaGGTGACGTGGCGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: GVSSLTALSSVQRSLGSPAICRL*VTWRLF
Trigger: GAACAAGCGCCACGTCACGCATAGCCTGCAAATCGC...GGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAAGTCACGCGGGCGATTTaGAGGCTATGCGTGACGTGG +
Preference number: 2 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQVTRAI*RLCVTW
Trigger: CCACGTCACGCATAGCCTGCAAATCGCCCGCGTGAC...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACCCAAGCTCCATCCTaGCAAAGGCTGGAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: LVFREASGHPRACQSPEITQAPS*QRLEAG
Trigger: ACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGACCTCGCTGTGTGGCTaGAAAGCCCTGCAGACCCAA +
Preference number: 2 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTTSLCG*KALQTQ
Trigger: TTGGGTCTGCAGGGCTTTGCAGCCACACAGCGAGGT...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp CATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCACGCACAGAAGGATATaGGATGAATGCAGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: HPAKGWRLVTLPTSIPGSTHRRI*DECSGS
Trigger: AGAGCCACTGCATTCATCCCATATCCTTCTGTGCGT...GGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGCCAGAACTCTGTCTCTaGGTGTGCACCCAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTPELCL*VCTQSC
Trigger: ACAGCTCTGGGTGCACACTCAGAGACAGAGTTCTGG...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp CTGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTGCCTGTCAGAGTCCTaGGATCACAACAAAAATCCT +
Preference number: 2 (lower is better)
Translates to: LDPKPQASISGSRGRFAGCLSES*DHNKNP
Trigger: AGGATTTTTGTTGTGATCTCAGGACTCTGACAGGCA...GCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCTTTGCAGGCTATGCGTaGCGTGGCGCTTGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: LVFREASGHPRACQSPEIFAGYA*RGACSF
Trigger: GAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAA...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp CCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCTCACAACAAAAATCCTaGGAGGACTCGGCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: PKLHPAKGWRLVTLPTSISQQKS*EDSAQL
Trigger: CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGA...GATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp GTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGGTGGCTGCAAAGCCCTaGAGACCCAAGCTCCATCCT +
Preference number: 2 (lower is better)
Translates to: VALVPSWFSTQIQPRGGRVAAKP*RPKLHP
Trigger: AGGATGGAGCTTGGGTCTGCAGGGCTTTGCAGCCAC...CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACAACCTCGCTGTGTGGCTaGAAAGCCCTGCAGACCCAA +
Preference number: 2 (lower is better)
Translates to: FREASGHPRACQSPEITTTSLCG*KALQTQ
Trigger: TTGGGTCTGCAGGGCTTTGCAGCCACACAGCGAGGT...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCCACCTCCATCAGGACTaGCTGGTGAACACGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLHLHQD*LVNTPG
Trigger: CCCAGGCGTGTTCACCAGCCAGTCCTGATGGAGGTG...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CCA 90 bp CTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAGCCCACCCTGTTTTGCCTTTCAAACTaGCAACGATGGGGAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LPTSIPGSLMWEGEEPTLFCLSN*QRWGEV
Trigger: AACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA...CAGGGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp CATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCGCGCTTGTTCCTTCCTaGTTTTCCACTCAAATTCAG +
Preference number: 2 (lower is better)
Translates to: HPAKGWRLVTLPTSIPGSALVPS*FSTQIQ
Trigger: CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGC...GGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCAGGCTATGCGTGACGTaGCGCTTGTTCCTTCCTGGT +
Preference number: 2 (lower is better)
Translates to: LVFREASGHPRACQSPEIRLCVT*RLFLPG
Trigger: ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCT...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp CCTGTCAGAGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGCATCCTGCCAAAGGCTaGAGGCTGGTGACCCTTCCG +
Preference number: 2 (lower is better)
Translates to: PVRVLRSQQKSCEDSAQLHPAKG*RLVTLP
Trigger: CGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG...CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACTCTGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTGAGGCTGGTTTTATTTaGACTGCACTGGGCCCACGT +
Preference number: 2 (lower is better)
Translates to: HSQRFLVFREASGHPRACEAGFI*TALGPR
Trigger: ACGTGGGCCCAGTGCAGTTCAAATAAAACCAGCCTC...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGGAGGCTGGTTTTATTTaGACTGCACTGGGCCCACGT +
Preference number: 2 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTEAGFI*TALGPR
Trigger: ACGTGGGCCCAGTGCAGTTCAAATAAAACCAGCCTC...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGCAGAAGGATATGGGATaGATGCAGTGGCTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTQKDMG*MQWLWG
Trigger: TCCCCAGAGCCACTGCATTCATCCCATATCCTTCTG...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCATCAGGACTGGCTGGTaGACACGCCTGGGACAGCAT +
Preference number: 2 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLIRTGW*TRLGQH
Trigger: ATGCTGTCCCAGGCGTGTTCACCAGCCAGTCCTGAT...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp GTCACGCGGGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCAATTCCACCATTaGAAAGTGAGCTGTGCCGGG +
Preference number: 2 (lower is better)
Translates to: VTRAICRLCVTWRLFLPGFQFHH*KVSCAG
Trigger: CCCGGCACAGCTCACTTTTCAATGGTGGAATTGAAA...ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp TTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGACAACCCAGTCACTCATaGACCTCCATCAGGACTGGC +
Preference number: 2 (lower is better)
Translates to: FAFQTGNDGERLVRRQAGQPSHS*TSIRTG
Trigger: GCCAGTCCTGATGGAGGTGCATGAGTGACTGGGTTG...TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR GCA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAAGCGATTTGCAGGCTATaGGTGACGTGGCGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQAICRL*VTWRLF
Trigger: GAACAAGCGCCACGTCACGCATAGCCTGCAAATCGC...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp GCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGATTTTGCCTTTCAAACTaGCAACGATGGGGAGAGGTT +
Preference number: 2 (lower is better)
Translates to: AGDPSDIHPRVPDVGRGRFCLSN*QRWGEV
Trigger: AACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA...TCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACCCAGAACTCTGTCTCTaGGTGTGCACCCAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHPELCL*VCTQSC
Trigger: ACAGCTCTGGGTGCACACTCAGAGACAGAGTTCTGG...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp CATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAATTTCTAGGATTCCGCTaGGGCTGGTTTTATTTGAAC +
Preference number: 2 (lower is better)
Translates to: HYHDGAAGPGLTSLCGCKFLGFR*GWFYLN
Trigger: GTTCAAATAAAACCAGCCTCAGCGGAATCCTAGAAA...TTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGCAGAAGGATATGGGATaGATGCAGTGGCTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: VALVPSWFSTQIQPRGGRQKDMG*MQWLWG
Trigger: TCCCCAGAGCCACTGCATTCATCCCATATCCTTCTG...CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACACAGAAGGATATGGGATaGATGCAGTGGCTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: FREASGHPRACQSPEITTQKDMG*MQWLWG
Trigger: TCCCCAGAGCCACTGCATTCATCCCATATCCTTCTG...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp CCTGTCAGAGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGGCCTGGGACAGCATCTaGACGCACAGAAGGATATGG +
Preference number: 2 (lower is better)
Translates to: PVRVLRSQQKSCEDSAQLAWDSI*THRRIW
Trigger: CCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGC...CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACTCTGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp CCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCTGCCTGTCAGAGTCCTaGGATCACAACAAAAATCCT +
Preference number: 2 (lower is better)
Translates to: PKLHPAKGWRLVTLPTSICLSES*DHNKNP
Trigger: AGGATTTTTGTTGTGATCTCAGGACTCTGACAGGCA...GATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCGCGTGCAGATCTTCTTaGGGCATCTCTCCAATCAAT +
Preference number: 2 (lower is better)
Translates to: ALSSVQRSLGSPTCLSESACRSS*GISPIN
Trigger: ATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGC...GGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR TCA 90 bp GGCGTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCCTCCAAAATTGCAGCTaGCATGCCTTCAGAGACAGA +
Preference number: 2 (lower is better)
Translates to: GVSSLTALSSVQRSLGSPLQNCS*HAFRDR
Trigger: TCTGTCTCTGAAGGCATGTCAGCTGCAATTTTGGAG...GGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR TCA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTTCTTTCCACCTGCCATaGATGATACATTCTCACGTA +
Preference number: 2 (lower is better)
Translates to: WTQSLRPPSQGHAGDLQASFHLP*MIHSHV
Trigger: TACGTGAGAATGTATCATTCATGGCAGGTGGAAAGA...AGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR GCA 90 bp TACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCAGTCTGAACCATGACTaGTTGAAAATAAGCCTCTAT +
Preference number: 2 (lower is better)
Translates to: YHDGAAGPGLTSLCGCKASLNHD*LKISLY
Trigger: ATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACT...GGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCTCACAACAAAAATCCTaGGAGGACTCGGCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: LVFREASGHPRACQSPEISQQKS*EDSAQL
Trigger: CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGA...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTTCAAACTGGCAACGATaGGGAGAGGTTGGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: HSQRFLVFREASGHPRACSNWQR*GEVGQK
Trigger: CTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGA...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CCA 90 bp GTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACATCAAACTGGCAACGATaGGGAGAGGTTGGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: VFREASGHPRACQSPEITSNWQR*GEVGQK
Trigger: CTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGA...TGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CCA 90 bp CCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCTTTTGCCTTTCAAACTaGCAACGATGGGGAGAGGTT +
Preference number: 2 (lower is better)
Translates to: PKLHPAKGWRLVTLPTSIFCLSN*QRWGEV
Trigger: AACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA...GATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGGCCTGGGACAGCATCTaGACGCACAGAAGGATATGG +
Preference number: 2 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQAWDSI*THRRIW
Trigger: CCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGC...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGATCAGGACTGGCTGGTaGACACGCCTGGGACAGCAT +
Preference number: 2 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLIRTGW*TRLGQH
Trigger: ATGCTGTCCCAGGCGTGTTCACCAGCCAGTCCTGAT...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATGAGGAGTCTGAACCATaGCTGCTTGAAAATAAGCCT +
Preference number: 2 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHEESEP*LLENKP
Trigger: AGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTC...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAAAGGACTCGGCTCAGCTaGCACGTCTGTTTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQRTRLS*HVCFAF
Trigger: AAAAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCT...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGTCCACCATTGAAAAGTaGGCTGTGCCGGGCGTGAGC +
Preference number: 2 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLSTIEK*AVPGVS
Trigger: GCTCACGCCCGGCACAGCTCACTTTTCAATGGTGGA...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR GCA 90 bp GGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTAGGATATGGGATGAATaGAGTGGCTCTGGGGACTCA +
Preference number: 2 (lower is better)
Translates to: GDLQAMRDVALVPSWFSTRIWDE*SGSGDS
Trigger: TGAGTCCCCAGAGCCACTGCATTCATCCCATATCCT...AGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR GCA 90 bp CTGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCAGTCTGAACCATGACTaGTTGAAAATAAGCCTCTAT +
Preference number: 2 (lower is better)
Translates to: LDPKPQASISGSRGRFAGSLNHD*LKISLY
Trigger: ATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACT...GCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTACGCACAGAAGGATATaGGATGAATGCAGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: HSQRFLVFREASGHPRACTHRRI*DECSGS
Trigger: AGAGCCACTGCATTCATCCCATATCCTTCTGTGCGT...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CCA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAATCAAACTGGCAACGATaGGGAGAGGTTGGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQSNWQR*GEVGQK
Trigger: CTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGA...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CCA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGAGGCTATGCGTGACGTaGCGCTTGTTCCTTCCTGGT +
Preference number: 2 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQRLCVT*RLFLPG
Trigger: ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCT...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp GCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGGCTATGCGTGACGTaGCGCTTGTTCCTTCCTGGT +
Preference number: 2 (lower is better)
Translates to: AMRDVALVPSWFSTQIQPRLCVT*RLFLPG
Trigger: ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCT...TGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATCCCGGGTCCCTGATGTaGGAAGGGGAAGAGCCCACC +
Preference number: 2 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNPGSLM*EGEEPT
Trigger: GGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGG...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR CAA 90 bp GAGGTTGGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTaGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: EVGQKAGGRSLNHDC*KISLYCPHQSPKAG
Trigger: ACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACCAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR CAA 90 bp ATTCACCACCGCGAAGCAATTCTTCACCACCGCGTGCAGATCTTCTaGAGGCATCTCTCCAATCAATCGTACCCCAGCGGCTCTGAAACA +
Preference number: 2 (lower is better)
Translates to: IHHREAILHHRVQIF*RHLSNQSYPSGSET
Trigger: TGTTTCAGAGCCGCTGGGGTACGATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGCGGTGGTGAAGAATTGCTTCGCGGTGGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR CAA 90 bp ATTCACCACCGCGAAGCAATTCTTCACCACCGCGTGCAGATCTTCTaGAGGCATCTCTCCAATCAATCGTACCCCAGCGGCTCTTTTCAC +
Preference number: 2 (lower is better)
Translates to: IHHREAILHHRVQIF*RHLSNQSYPSGSFH
Trigger: GTGAAAAGAGCCGCTGGGGTACGATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGCGGTGGTGAAGAATTGCTTCGCGGTGGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441390.6
3UTR-3UTR TCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGCCAGAACTCTGTCTCTaGGTGTGCACCCAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLPELCL*VCTQSC
Trigger: ACAGCTCTGGGTGCACACTCAGAGACAGAGTTCTGG...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACAGGACTCGGCTCAGCTaGCACGTCTGTTTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHRTRLS*HVCFAF
Trigger: AAAAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCT...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR GCA 90 bp GGCGTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCCGTCTGTTTTGCTTTTaGCTTTCAAACTGGCAACGA +
Preference number: 2 (lower is better)
Translates to: GVSSLTALSSVQRSLGSPRLFCF*LSNWQR
Trigger: TCGTTGCCAGTTTGAAAGGCAAAAGCAAAACAGACG...GGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR GCA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACTCACAACAAAAATCCTaGGAGGACTCGGCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHSQQKS*EDSAQL
Trigger: CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGA...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR GCA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATAAATTGCAGCTGACATaGCTTCAGAGACAGAGCTAT +
Preference number: 2 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHKLQLT*LQRQSY
Trigger: ATAGCTCTGTCTCTGAAGGCATGTCAGCTGCAATTT...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR CCA 90 bp TTTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGTTCCCTTGTAAACACTaGATCGACTTCAGGACCCAC +
Preference number: 2 (lower is better)
Translates to: FCLSNWQRWGEVGQKAGGFPCKH*IDFRTH
Trigger: GTGGGTCCTGAAGTCGATCCAGTGTTTACAAGGGAA...CCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441390.6
3UTR-3UTR TCA 90 bp CGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTTTTCTAGGATTCCGCTaGGGCTGGTTTTATTTGAAC +
Preference number: 2 (lower is better)
Translates to: RFLVFREASGHPRACQSPFLGFR*GWFYLN
Trigger: GTTCAAATAAAACCAGCCTCAGCGGAATCCTAGAAA...AGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGAGGACTCGGCTCAGCTaGCACGTCTGTTTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQRTRLS*HVCFAF
Trigger: AAAAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCT...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp TTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGATGCCTGTCAGAGTCCTaGGATCACAACAAAAATCCT +
Preference number: 2 (lower is better)
Translates to: FAFQTGNDGERLVRRQAGCLSES*DHNKNP
Trigger: AGGATTTTTGTTGTGATCTCAGGACTCTGACAGGCA...TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATAAGGCTGGAGGCTGGTaGCCCTTCCGACATCCATCC +
Preference number: 2 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNKAGGW*PFRHPS
Trigger: GGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTT...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGAAAACAGTAGCCCTGTaGCTTCATGCTTCACCACGG +
Preference number: 2 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQKTVAL*LHASPR
Trigger: CCGTGGTGAAGCATGAAGTCACAGGGCTACTGTTTT...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR CCA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCACGCACAGAAGGATATaGGATGAATGCAGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLTHRRI*DECSGS
Trigger: AGAGCCACTGCATTCATCCCATATCCTTCTGTGCGT...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CCA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGTCAAACTGGCAACGATaGGGAGAGGTTGGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQSNWQR*GEVGQK
Trigger: CTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGA...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGTCCCGGGGATGTTCCTaGCCAATACCGGTACTTCTA +
Preference number: 2 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLSRGCS*PIPVLL
Trigger: TAGAAGTACCGGTATTGGCCAGGAACATCCCCGGGA...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR TCA 90 bp CAGGTAATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTATCAGGACTGGCTGGTaGACACGCCTGGGACAGCAT +
Preference number: 2 (lower is better)
Translates to: QVIKFSPKFPENQFPFPCIRTGW*TRLGQH
Trigger: ATGCTGTCCCAGGCGTGTTCACCAGCCAGTCCTGAT...ACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGATTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp CCTGTCAGAGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGTGCCTGTCAGAGTCCTaGGATCACAACAAAAATCCT +
Preference number: 2 (lower is better)
Translates to: PVRVLRSQQKSCEDSAQLCLSES*DHNKNP
Trigger: AGGATTTTTGTTGTGATCTCAGGACTCTGACAGGCA...CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACTCTGACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAATCTTTCCACCTGCCATaGATGATACATTCTCACGTA +
Preference number: 2 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQSFHLP*MIHSHV
Trigger: TACGTGAGAATGTATCATTCATGGCAGGTGGAAAGA...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR GCA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACGTCTGTTTTGCTTTTaGCTTTCAAACTGGCAACGA +
Preference number: 2 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQRLFCF*LSNWQR
Trigger: TCGTTGCCAGTTTGAAAGGCAAAAGCAAAACAGACG...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR GCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACACGTCTGTTTTGCTTTTaGCTTTCAAACTGGCAACGA +
Preference number: 2 (lower is better)
Translates to: FREASGHPRACQSPEITTRLFCF*LSNWQR
Trigger: TCGTTGCCAGTTTGAAAGGCAAAAGCAAAACAGACG...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CCA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACGCGCTTGTTCCTTCCTaGTTTTCCACTCAAATTCAG +
Preference number: 2 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHALVPS*FSTQIQ
Trigger: CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGC...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp CAGGTAATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCAGAACTCTGTCTCTaGGTGTGCACCCAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: QVIKFSPKFPENQFPFPCPELCL*VCTQSC
Trigger: ACAGCTCTGGGTGCACACTCAGAGACAGAGTTCTGG...ACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGATTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTTTCTAGGATTCCGCTaGGGCTGGTTTTATTTGAAC +
Preference number: 2 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLFLGFR*GWFYLN
Trigger: GTTCAAATAAAACCAGCCTCAGCGGAATCCTAGAAA...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGGCGTGCAGATCTTCTTaGGGCATCTCTCCAATCAAT +
Preference number: 2 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLACRSS*GISPIN
Trigger: ATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGC...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR GCA 90 bp AGCAGGTGTCTGATGAGGCGGGGCCCTCAATCTTCAGTGCTTCCTTCCAGCTTCAGTCTGAACCATGACTaGTTGAAAATAAGCCTCTAT +
Preference number: 2 (lower is better)
Translates to: SRCLMRRGPQSSVLPSSFSLNHD*LKISLY
Trigger: ATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACT...GAAGCTGGAAGGAAGCACTGAAGATTGAGGGCCCCGCCTCATCAGACACCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR CCA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGGCGCTTGTTCCTTCCTaGTTTTCCACTCAAATTCAG +
Preference number: 2 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQALVPS*FSTQIQ
Trigger: CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGC...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR TCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGGAGGAGTCTGAACCATaGCTGCTTGAAAATAAGCCT +
Preference number: 2 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLEESEP*LLENKP
Trigger: AGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTC...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTCTCCAAAATTGCAGCTaGCATGCCTTCAGAGACAGA +
Preference number: 2 (lower is better)
Translates to: ITTKILRGLGSADTSVLLLQNCS*HAFRDR
Trigger: TCTGTCTCTGAAGGCATGTCAGCTGCAATTTTGGAG...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR GCA 90 bp GGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGGATATGGGATGAATaGAGTGGCTCTGGGGACTCA +
Preference number: 2 (lower is better)
Translates to: GRSLNHDCLKISLYCPHQRIWDE*SGSGDS
Trigger: TGAGTCCCCAGAGCCACTGCATTCATCCCATATCCT...TTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR GCA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAAAGTCTGAACCATGACTaGTTGAAAATAAGCCTCTAT +
Preference number: 2 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQSLNHD*LKISLY
Trigger: ATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACT...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR GCA 90 bp CTGACATGCCTTCAGAGACAGAGCTATTCACCACCGCGAAGCAATTCTTCACCAGGCGTTTGGTGTTGTTaGAATTCCTGGGTCAAAGAA +
Preference number: 2 (lower is better)
Translates to: LTCLQRQSYSPPRSNSSPGVWCC*NSWVKE
Trigger: TTCTTTGACCCAGGAATTGCAACAACACCAAACGCC...TGGTGAAGAATTGCTTCGCGGTGGTGAATAGCTCTGTCTCTGAAGGCATGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR-3UTR TCA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTGAGGAGTCTGAACCATaGCTGCTTGAAAATAAGCCT +
Preference number: 2 (lower is better)
Translates to: ITTKILRGLGSADTSVLLEESEP*LLENKP
Trigger: AGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTC...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR GCA 90 bp CAGGTAATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTAGGATATGGGATGAATaGAGTGGCTCTGGGGACTCA +
Preference number: 2 (lower is better)
Translates to: QVIKFSPKFPENQFPFPCRIWDE*SGSGDS
Trigger: TGAGTCCCCAGAGCCACTGCATTCATCCCATATCCT...ACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGATTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR GCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGCGTCTGTTTTGCTTTTaGCTTTCAAACTGGCAACGA +
Preference number: 2 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLRLFCF*LSNWQR
Trigger: TCGTTGCCAGTTTGAAAGGCAAAAGCAAAACAGACG...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CCA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTACGCACAGAAGGATATaGGATGAATGCAGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSTHRRI*DECSGS
Trigger: AGAGCCACTGCATTCATCCCATATCCTTCTGTGCGT...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR GCA 90 bp AGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTAGTCTGAACCATGACTaGTTGAAAATAAGCCTCTAT +
Preference number: 2 (lower is better)
Translates to: SPEITTKILRGLGSADTSSLNHD*LKISLY
Trigger: ATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACT...AGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CCA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTTTTTGCCTTTCAAACTaGCAACGATGGGGAGAGGTT +
Preference number: 2 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSFCLSN*QRWGEV
Trigger: AACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR TCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATTCCACCTGCCATGAATaGTACATTCTCACGTATTCC +
Preference number: 2 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNSTCHE*YILTYS
Trigger: GGAATACGTGAGAATGTATCATTCATGGCAGGTGGA...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR CCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATTTTTGCCTTTCAAACTaGCAACGATGGGGAGAGGTT +
Preference number: 2 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNFCLSN*QRWGEV
Trigger: AACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CCA 90 bp CAGGTAATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTGTTAAAAGCGGCGTTTaGTGTTGTTGCAATTCCTGG +
Preference number: 2 (lower is better)
Translates to: QVIKFSPKFPENQFPFPCVKSGV*CCCNSW
Trigger: CCAGGAATTGCAACAACACCAAACGCCGCTTTTAAC...ACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGATTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR-3UTR TCA 90 bp CAGGTAATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTTTTCTAGGATTCCGCTaGGGCTGGTTTTATTTGAAC +
Preference number: 2 (lower is better)
Translates to: QVIKFSPKFPENQFPFPCFLGFR*GWFYLN
Trigger: GTTCAAATAAAACCAGCCTCAGCGGAATCCTAGAAA...ACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGATTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR CAA 90 bp TACTGTTGTTGCCTGCTCATGGCTCCCAGTCTGAGGCCTTCTCTCTaGATTAGCCAGAATTTTAGCATCAAACTAGAAGTTTTTCTTTCA +
Preference number: 2 (lower is better)
Translates to: YCCCLLMAPSLRPSL*ISQNFSIKLEVFLS
Trigger: TGAAAGAAAAACTTCTAGTTTGATGCTAAAATTCTGGCTAATCAAGAGAGAAGGCCTCAGACTGGGAGCCATGAGCAGGCAACAACAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539044.5
3UTR GCA 72 bp GGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTaGAAAGCCCTGCAGACCCAAGCTCCATCCTGCCAA +
Preference number: 3 (lower is better)
Translates to: GAAGPGLTSLCG*KALQTQAPSCQ
Trigger: TTGGCAGGATGGAGCTTGGGTCTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR TCA 72 bp GCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTaGCCTCGCTGTGTGGCTGCAAAGCCCTGCAGACCC +
Preference number: 3 (lower is better)
Translates to: ATITMMARLAPD*PRCVAAKPCRP
Trigger: GGGTCTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR CCA 72 bp GTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTaGGAAGGGGAAGAGCCCACCCTGGACCCAAAGCCT +
Preference number: 3 (lower is better)
Translates to: VTLPTSIPGSLM*EGEEPTLDPKP
Trigger: AGGCTTTGGGTCCAGGGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp GATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCCTGCAGAAGCGGCGTTTGGTGTaGTTGCAATTCCTGGGTCAA +
Preference number: 3 (lower is better)
Translates to: DGAAGPGLTSLCGCKALQKRRLV*LQFLGQ
Trigger: TTGACCCAGGAATTGCAACAACACCAAACGCCGCTT...CTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR GCA 72 bp GCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTaGAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCT +
Preference number: 3 (lower is better)
Translates to: ASGLHLRVTRAI*RLCVTWRLFLP
Trigger: AGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp CCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCAACGATGGGGAGAGGTaGGTCAGAAGGCAGGCGGGA +
Preference number: 3 (lower is better)
Translates to: PKLHPAKGWRLVTLPTSINDGER*VRRQAG
Trigger: TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTT...GATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR GCA 72 bp TGTGGCTGCAAAGCCCTGCAGACCCAAGCTCCATCCTaGCAAAGGCTGGAGGCTGGTGACCCTTCCGACATC +
Preference number: 3 (lower is better)
Translates to: CGCKALQTQAPS*QRLEAGDPSDI
Trigger: GATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGTCTGCAGGGCTTTGCAGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTTTCAATTCCACCATaGAAAAGTGAGCTGTGCCGG +
Preference number: 3 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSLSIPP*KSELCR
Trigger: CCGGCACAGCTCACTTTTCAATGGTGGAATTGAAAG...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp GCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGATGCGTGACGTGGCGCTaGTTCCTTCCTGGTTTTCCA +
Preference number: 3 (lower is better)
Translates to: AGDPSDIHPRVPDVGRGRCVTWR*FLPGFP
Trigger: TGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCA...TCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTTGCGTGACGTGGCGCTaGTTCCTTCCTGGTTTTCCA +
Preference number: 3 (lower is better)
Translates to: WTQSLRPPSQGHAGDLQACVTWR*FLPGFP
Trigger: TGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCA...AGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp GTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGGGTCACGCGGGCGATTaGCAGGCTATGCGTGACGTG +
Preference number: 3 (lower is better)
Translates to: VALVPSWFSTQIQPRGGRGHAGD*QAMRDV
Trigger: CACGTCACGCATAGCCTGCAAATCGCCCGCGTGACC...CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp TTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGAGGTCACGCGGGCGATTaGCAGGCTATGCGTGACGTG +
Preference number: 3 (lower is better)
Translates to: FAFQTGNDGERLVRRQAGGHAGD*QAMRDV
Trigger: CACGTCACGCATAGCCTGCAAATCGCCCGCGTGACC...TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp CTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGCGGCGTTTGGTGTTGTaGCAATTCCTGGGTCAAAGA +
Preference number: 3 (lower is better)
Translates to: LEAGDPSDIHPRVPDVGRRRLVL*QFLGQR
Trigger: TCTTTGACCCAGGAATTGCAACAACACCAAACGCCG...CCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR-3UTR CAA 90 bp CTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAGCCCACCCTGCTTTCAATTCCACCATaGAAAAGTGAGCTGTGCCGG +
Preference number: 3 (lower is better)
Translates to: LPTSIPGSLMWEGEEPTLLSIPP*KSELCR
Trigger: CCGGCACAGCTCACTTTTCAATGGTGGAATTGAAAG...CAGGGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp GGCGTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCTGCGTGACGTGGCGCTaGTTCCTTCCTGGTTTTCCA +
Preference number: 3 (lower is better)
Translates to: GVSSLTALSSVQRSLGSPCVTWR*FLPGFP
Trigger: TGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCA...GGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp TACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCGAGAGGATCCTTAACTaGTCGAAGTCCACATATCAG +
Preference number: 3 (lower is better)
Translates to: YHDGAAGPGLTSLCGCKAERILN*SKSTYQ
Trigger: CTGATATGTGGACTTCGACAAGTTAAGGATCCTCTC...GGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR TCA 72 bp CCCAGTCACTCATGCACCTCCATCAGGACTGGCTGGTaGACACGCCTGGGACAGCATCTGAACGCACAGAAG +
Preference number: 3 (lower is better)
Translates to: PSHSCTSIRTGW*TRLGQHLNAQK
Trigger: CTTCTGTGCGTTCAGATGCTGTCCCAGGCGTGTTCACCAGCCAGTCCTGATGGAGGTGCATGAGTGACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR GCA 72 bp CTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTATaGGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCA +
Preference number: 3 (lower is better)
Translates to: LHLRVTRAICRL*VTWRLFLPGFP
Trigger: TGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCGTGACGTGGCGCTaGTTCCTTCCTGGTTTTCCA +
Preference number: 3 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTCVTWR*FLPGFP
Trigger: TGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCA...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp GCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAGGTCACGCGGGCGATTaGCAGGCTATGCGTGACGTG +
Preference number: 3 (lower is better)
Translates to: AMRDVALVPSWFSTQIQPGHAGD*QAMRDV
Trigger: CACGTCACGCATAGCCTGCAAATCGCCCGCGTGACC...TGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGGGTCACGCGGGCGATTaGCAGGCTATGCGTGACGTG +
Preference number: 3 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQGHAGD*QAMRDV
Trigger: CACGTCACGCATAGCCTGCAAATCGCCCGCGTGACC...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR TCA 72 bp AGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTaGGATCACAACAAAAATCCTGCGAGGACTCGGCTC +
Preference number: 3 (lower is better)
Translates to: RSLGSPTCLSES*DHNKNPARTRL
Trigger: GAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR TCA 72 bp ATCTCAGGGTCACGCGGGCGATTTGCAGGCTATGCGTaGCGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCA +
Preference number: 3 (lower is better)
Translates to: ISGSRGRFAGYA*RGACSFLVFHS
Trigger: TGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp CCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGCTGAACCATGACTGCTaGAAAATAAGCCTCTATTGT +
Preference number: 3 (lower is better)
Translates to: PAKGWRLVTLPTSIPGSLLNHDC*KISLYC
Trigger: ACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAG...CAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR TCA 72 bp TCAGGACTGGCTGGTGAACACGCCTGGGACAGCATCTaGACGCACAGAAGGATATGGGATGAATGCAGTGGC +
Preference number: 3 (lower is better)
Translates to: SGLAGEHAWDSI*THRRIWDECSG
Trigger: GCCACTGCATTCATCCCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGCGTGTTCACCAGCCAGTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR CCA 72 bp TTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTaGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGG +
Preference number: 3 (lower is better)
Translates to: LQAMRDVALVPS*FSTQIQPRGGR
Trigger: CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR CCA 72 bp AGGGTCACGCGGGCGATTTGCAGGCTATGCGTGACGTaGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTC +
Preference number: 3 (lower is better)
Translates to: RVTRAICRLCVT*RLFLPGFPLKF
Trigger: GAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR TCA 72 bp GCGAAGCAATTCTTCACCACCGCGTGCAGATCTTCTTaGGGCATCTCTCCAATCAATCGTACCCCAGCGGCT +
Preference number: 3 (lower is better)
Translates to: AKQFFTTACRSS*GISPINRTPAA
Trigger: AGCCGCTGGGGTACGATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGCGGTGGTGAAGAATTGCTTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR CCA 72 bp CGTCTGTTTTGCTTTTGCCTTTCAAACTGGCAACGATaGGGAGAGGTTGGTCAGAAGGCAGGCGGGAGGAGT +
Preference number: 3 (lower is better)
Translates to: RLFCFCLSNWQR*GEVGQKAGGRS
Trigger: ACTCCTCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAAGCAAAACAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR CCA 72 bp CATGCTTCACCACGGCAGCATTCCCGGGGATGTTCCTaGCCAATACCGGTACTTCTAAATCCATTGCCTCCA +
Preference number: 3 (lower is better)
Translates to: HASPRQHSRGCS*PIPVLLNPLPP
Trigger: TGGAGGCAATGGATTTAGAAGTACCGGTATTGGCCAGGAACATCCCCGGGAATGCTGCCGTGGTGAAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR CAA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCCTTTCAATTCCACCATaGAAAAGTGAGCTGTGCCGG +
Preference number: 3 (lower is better)
Translates to: LVFREASGHPRACQSPEILSIPP*KSELCR
Trigger: CCGGCACAGCTCACTTTTCAATGGTGGAATTGAAAG...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR TCA 72 bp GAACAAACTCCTGAGGATTGGAAAACAGTAGCCCTGTaGCTTCATGCTTCACCACGGCAGCATTCCCGGGGA +
Preference number: 3 (lower is better)
Translates to: EQTPEDWKTVAL*LHASPRQHSRG
Trigger: TCCCCGGGAATGCTGCCGTGGTGAAGCATGAAGTCACAGGGCTACTGTTTTCCAATCCTCAGGAGTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR CAA 90 bp GTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAGCTGACACGTCTGTTTaGCTTTTGCCTTTCAAACTG +
Preference number: 3 (lower is better)
Translates to: VFREASGHPRACQSPEITADTSV*LLPFKL
Trigger: CAGTTTGAAAGGCAAAAGCAAAACAGACGTGTCAGC...TGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CAA 90 bp GTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGCTTTCAATTCCACCATaGAAAAGTGAGCTGTGCCGG +
Preference number: 3 (lower is better)
Translates to: VALVPSWFSTQIQPRGGRLSIPP*KSELCR
Trigger: CCGGCACAGCTCACTTTTCAATGGTGGAATTGAAAG...CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCAAATTATCAGCACTTaGGTTAATCTCAGAGCGTTG +
Preference number: 3 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHQIIST*VNLRAL
Trigger: CAACGCTCTGAGATTAACCAAAGTGCTGATAATTTG...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR TCA 72 bp CTGGGACAGCATCTGAACGCACAGAAGGATATGGGATaGATGCAGTGGCTCTGGGGACTCACGACTAACATT +
Preference number: 3 (lower is better)
Translates to: LGQHLNAQKDMG*MQWLWGLTTNI
Trigger: AATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATCCCATATCCTTCTGTGCGTTCAGATGCTGTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR TCA 72 bp GGTTGGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATaGCTGCTTGAAAATAAGCCTCTATTGTCCACACCA +
Preference number: 3 (lower is better)
Translates to: GWSEGRREESEP*LLENKPLLSTP
Trigger: TGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR GCA 72 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTaGTTGAAAATAAGCCTCTATTGTCCACACCAAAGC +
Preference number: 3 (lower is better)
Translates to: GQKAGGRSLNHD*LKISLYCPHQS
Trigger: GCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CAA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGCTGAACCATGACTGCTaGAAAATAAGCCTCTATTGT +
Preference number: 3 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTLNHDC*KISLYC
Trigger: ACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAG...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CAA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGGTTAATCTCAGAGCGTaGAAGAAAGGTATTCCAGTT +
Preference number: 3 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTVNLRA*KKGIPV
Trigger: AACTGGAATACCTTTCTTCAACGCTCTGAGATTAAC...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR TCA 72 bp TCAATTCCACCATTGAAAAGTGAGCTGTGCCGGGCGTaGGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAA +
Preference number: 3 (lower is better)
Translates to: SIPPLKSELCRA*AHSQRFLVFRE
Trigger: TTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTCACTTTTCAATGGTGGAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CAA 90 bp GGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCTGAACCATGACTGCTaGAAAATAAGCCTCTATTGT +
Preference number: 3 (lower is better)
Translates to: GDLQAMRDVALVPSWFSTLNHDC*KISLYC
Trigger: ACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAG...AGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR-3UTR CAA 90 bp GCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAGCTGACACGTCTGTTTaGCTTTTGCCTTTCAAACTG +
Preference number: 3 (lower is better)
Translates to: AMRDVALVPSWFSTQIQPADTSV*LLPFKL
Trigger: CAGTTTGAAAGGCAAAAGCAAAACAGACGTGTCAGC...TGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR TCA 72 bp CTAAAAAGCACAACTTTCAATTCCACCATTGAAAAGTaGGCTGTGCCGGGCGTGAGCTCACTCACAGCGCTT +
Preference number: 3 (lower is better)
Translates to: LKSTTFNSTIEK*AVPGVSSLTAL
Trigger: AAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTCACTTTTCAATGGTGGAATTGAAAGTTGTGCTTTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CAA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGGTACTTCTAAATCCATaGCCTCCAAAATTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQVLLNP*PPKLQL
Trigger: CAGCTGCAATTTTGGAGGCAATGGATTTAGAAGTAC...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR TCA 72 bp GATGAGCTGTTGGTAGGTGTCTCTTTCCACCTGCCATaGATGATACATTCTCACGTATTCCCTTCCGTTCAC +
Preference number: 3 (lower is better)
Translates to: DELLVGVSFHLP*MIHSHVFPSVH
Trigger: GTGAACGGAAGGGAATACGTGAGAATGTATCATTCATGGCAGGTGGAAAGAGACACCTACCAACAGCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
3UTR-3UTR CAA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTGCTGACACGTCTGTTTaGCTTTTGCCTTTCAAACTG +
Preference number: 3 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSADTSV*LLPFKL
Trigger: CAGTTTGAAAGGCAAAAGCAAAACAGACGTGTCAGC...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR TCA 72 bp CACTTTTCTAAAAAGCACAACTTTCAATTCCACCATTaGAAAGTGAGCTGTGCCGGGCGTGAGCTCACTCAC +
Preference number: 3 (lower is better)
Translates to: HFSKKHNFQFHH*KVSCAGRELTH
Trigger: GTGAGTGAGCTCACGCCCGGCACAGCTCACTTTTCAATGGTGGAATTGAAAGTTGTGCTTTTTAGAAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR-3UTR CAA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATCTGAACCATGACTGCTaGAAAATAAGCCTCTATTGT +
Preference number: 3 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNLNHDC*KISLYC
Trigger: ACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAG...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR CCA 72 bp GCGTTGAAGAAAGGTATTCCAGTTAAAAGCGGCGTTTaGTGTTGTTGCAATTCCTGGGTCAAAGAAACAAAA +
Preference number: 3 (lower is better)
Translates to: ALKKGIPVKSGV*CCCNSWVKETK
Trigger: TTTTGTTTCTTTGACCCAGGAATTGCAACAACACCAAACGCCGCTTTTAACTGGAATACCTTTCTTCAACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR TCA 72 bp TTTCATAATTGGAAAGCTGGTATCAAGCACTGTACCTaGGATGTGATCATCAGAATGAAAACAATGAAAAAG +
Preference number: 3 (lower is better)
Translates to: FHNWKAGIKHCT*DVIIRMKTMKK
Trigger: CTTTTTCATTGTTTTCATTCTGATGATCACATCTCAGGTACAGTGCTTGATACCAGCTTTCCAATTATGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR TCA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGGAACGCGCTGGGCCGTaGCCGCGTTGCCGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSERAGP*PRCRCV
Trigger: CACACACCGGCAACGCGGTCACGGCCCAGCGCGTTC...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp GATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCCTGCAGCCTGCAGCCTCTAGATaGGCCCGAACGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DGAAGPGLTSLCGCKALQPAASR*ARTRWA
Trigger: GGCCCAGCGCGTTCGGGCCCATCTAGAGGCTGCAGG...CTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGCGGCTGGCCCCGGACTaGCCTCGCTGTGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PAKGWRLVTLPTSIPGSLRLAPD*PRCVAA
Trigger: TGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCG...CAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CTGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTGGGCCCGAACGCGCTaGGCCGTGACCGCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: LDPKPQASISGSRGRFAGWARTR*AVTALP
Trigger: CGGCAACGCGGTCACGGCCCAGCGCGTTCGGGCCCA...GCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCGAACGCGCTGGGCCGTaGCCGCGTTGCCGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HPAKGWRLVTLPTSIPGSERAGP*PRCRCV
Trigger: CACACACCGGCAACGCGGTCACGGCCCAGCGCGTTC...GGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCCATCCCCGGGTCCCTaGTGTGGGAAGGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSPSPGP*CGKGKS
Trigger: GCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGG...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCAGGCCACCATTACCATaGTGGCGCGGCTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: HPAKGWRLVTLPTSIPGSRPPLP*WRGWPR
Trigger: CCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCT...GGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAGCCCACCCTGAGGCCACCATTACCATaGTGGCGCGGCTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LPTSIPGSLMWEGEEPTLRPPLP*WRGWPR
Trigger: CCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCT...CAGGGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAGCCCACCCTGCCTGCAGCCTCTAGATaGGCCCGAACGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPTSIPGSLMWEGEEPTLPAASR*ARTRWA
Trigger: GGCCCAGCGCGTTCGGGCCCATCTAGAGGCTGCAGG...CAGGGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp TACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCCCCGGGTCCCTGATGTaGGAAGGGGAAGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: YHDGAAGPGLTSLCGCKAPGSLM*EGEEPT
Trigger: GGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGG...GGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGGAGCTGTGCCGGGCGTaGGCTCACTCACAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: PAKGWRLVTLPTSIPGSLELCRA*AHSQRF
Trigger: AAAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTC...CAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGTCCACCATTGAAAAGTaGGCTGTGCCGGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSSTIEK*AVPGVS
Trigger: GCTCACGCCCGGCACAGCTCACTTTTCAATGGTGGA...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp TACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCAAGGCTGGAGGCTGGTaGCCCTTCCGACATCCATCC +
Preference number: 4 (lower is better)
Translates to: YHDGAAGPGLTSLCGCKAKAGGW*PFRHPS
Trigger: GGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTT...GGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp CCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGGTCACGCGGGCGATTTaGAGGCTATGCGTGACGTGG +
Preference number: 4 (lower is better)
Translates to: PAKGWRLVTLPTSIPGSLVTRAI*RLCVTW
Trigger: CCACGTCACGCATAGCCTGCAAATCGCCCGCGTGAC...CAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp GTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACATGGGCCCGAACGCGCTaGGCCGTGACCGCGTTGCCG +
Preference number: 4 (lower is better)
Translates to: VFREASGHPRACQSPEITWARTR*AVTALP
Trigger: CGGCAACGCGGTCACGGCCCAGCGCGTTCGGGCCCA...TGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CTGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCGGGAAGAGCCCACCCTaGACCCAAAGCCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LDPKPQASISGSRGRFAGGKSPP*TQSLRP
Trigger: AGGCCTGAGGCTTTGGGTCCAGGGTGGGCTCTTCCC...GCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTCCCGGGTCCCTGATGTaGGAAGGGGAAGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: WTQSLRPPSQGHAGDLQAPGSLM*EGEEPT
Trigger: GGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGG...AGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAGAGCTGTGCCGGGCGTaGGCTCACTCACAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: AGDPSDIHPRVPDVGRGRELCRA*AHSQRF
Trigger: AAAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTC...TCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGTTTGCAGGCTATGCGTaGCGTGGCGCTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSFAGYA*RGACSF
Trigger: GAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAA...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTCGGCTGGCCCCGGACTaGCCTCGCTGTGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RFLVFREASGHPRACQSPRLAPD*PRCVAA
Trigger: TGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCG...AGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCGGCTGGCCCCGGACTaGCCTCGCTGTGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HSQRFLVFREASGHPRACRLAPD*PRCVAA
Trigger: TGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCG...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGCATCCTGCCAAAGGCTaGAGGCTGGTGACCCTTCCG +
Preference number: 4 (lower is better)
Translates to: LEAGDPSDIHPRVPDVGRHPAKG*RLVTLP
Trigger: CGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG...CCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGACTGACCTCGCTGTGTaGCTGCAAAGCCCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PAKGWRLVTLPTSIPGSLTDLAV*LQSPAD
Trigger: GTCTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGT...CAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAAAGGCTGGAGGCTGGTaGCCCTTCCGACATCCATCC +
Preference number: 4 (lower is better)
Translates to: AGDPSDIHPRVPDVGRGRKAGGW*PFRHPS
Trigger: GGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTT...TCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp CTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAGCCCACCCTGGTGGCTGCAAAGCCCTaGAGACCCAAGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: LPTSIPGSLMWEGEEPTLVAAKP*RPKLHP
Trigger: AGGATGGAGCTTGGGTCTGCAGGGCTTTGCAGCCAC...CAGGGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGCCTGCAGCCTCTAGATaGGCCCGAACGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTPAASR*ARTRWA
Trigger: GGCCCAGCGCGTTCGGGCCCATCTAGAGGCTGCAGG...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCCTGCAGCCTCTAGATaGGCCCGAACGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: HSQRFLVFREASGHPRACPAASR*ARTRWA
Trigger: GGCCCAGCGCGTTCGGGCCCATCTAGAGGCTGCAGG...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR CAA 72 bp AGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTaGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLRPPSQGHAGD*QAMRDVALVPS
Trigger: GGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GACAGAGCTATTCACCACCGCGAAGCAATTCTTCACCACCGCGTGCAGATCTTCGAACGCGCTGGGCCGTaGCCGCGTTGCCGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: DRAIHHREAILHHRVQIFERAGP*PRCRCV
Trigger: CACACACCGGCAACGCGGTCACGGCCCAGCGCGTTC...GAAGATCTGCACGCGGTGGTGAAGAATTGCTTCGCGGTGGTGAATAGCTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
CDS-3UTR TCA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACGAACGCGCTGGGCCGTaGCCGCGTTGCCGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHERAGP*PRCRCV
Trigger: CACACACCGGCAACGCGGTCACGGCCCAGCGCGTTC...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGCCTGGGACAGCATCTaGACGCACAGAAGGATATGG +
Preference number: 4 (lower is better)
Translates to: LEAGDPSDIHPRVPDVGRAWDSI*THRRIW
Trigger: CCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGC...CCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp GTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGCGCGTTGCCGGTGTGTaGCCGCAGCACCGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VALVPSWFSTQIQPRGGRRVAGV*PQHRQE
Trigger: TTCCTGGCGGTGCTGCGGCCACACACCGGCAACGCG...CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281703.11
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTCCAAAATTGCAGCTaGCATGCCTTCAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSLQNCS*HAFRDR
Trigger: TCTGTCTCTGAAGGCATGTCAGCTGCAATTTTGGAG...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGAAAACAGTAGCCCTGTaGCTTCATGCTTCACCACGG +
Preference number: 4 (lower is better)
Translates to: PAKGWRLVTLPTSIPGSLKTVAL*LHASPR
Trigger: CCGTGGTGAAGCATGAAGTCACAGGGCTACTGTTTT...CAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CTGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCCAGAAGGATATGGGATaGATGCAGTGGCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LDPKPQASISGSRGRFAGQKDMG*MQWLWG
Trigger: TCCCCAGAGCCACTGCATTCATCCCATATCCTTCTG...GCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGCTGTGCCGGGCGTaGGCTCACTCACAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: RFLVFREASGHPRACQSPELCRA*AHSQRF
Trigger: AAAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTC...AGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp CGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGGCCAGTGTGTCGTCTaGCAGGCACCTCGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: RFLVFREASGHPRACQSPGQCVV*QAPRSQ
Trigger: CTGACTGCGAGGTGCCTGTCAGACGACACACTGGCC...AGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537468.1
CDS-3UTR CCA 90 bp CCTGTCAGAGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGCGCGTTGCCGGTGTGTaGCCGCAGCACCGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PVRVLRSQQKSCEDSAQLRVAGV*PQHRQE
Trigger: TTCCTGGCGGTGCTGCGGCCACACACCGGCAACGCG...CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACTCTGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281703.11
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGCCAAAAGGGATTCGGTaGCCTTGCAAAAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LEAGDPSDIHPRVPDVGRPKGIR*PCKSLP
Trigger: AGGCAGGCTTTTGCAAGGCCACCGAATCCCTTTTGG...CCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGTCCCGGGGATGTTCCTaGCCAATACCGGTACTTCTA +
Preference number: 4 (lower is better)
Translates to: LEAGDPSDIHPRVPDVGRSRGCS*PIPVLL
Trigger: TAGAAGTACCGGTATTGGCCAGGAACATCCCCGGGA...CCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp TTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGACCCGGGTCCCTGATGTaGGAAGGGGAAGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: FAFQTGNDGERLVRRQAGPGSLM*EGEEPT
Trigger: GGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGG...TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCATCCTGCCAAAGGCTaGAGGCTGGTGACCCTTCCG +
Preference number: 4 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHHPAKG*RLVTLP
Trigger: CGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTCCCTTAGCATGCGGCTaGCTTCCTCAAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: WTQSLRPPSQGHAGDLQAPLACG*LPQELC
Trigger: GCAGAGTTCTTGAGGAAGCCAGCCGCATGCTAAGGG...AGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441390.6
CDS-3UTR TCA 90 bp CATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCAAAACAGTAGCCCTGTaGCTTCATGCTTCACCACGG +
Preference number: 4 (lower is better)
Translates to: HPAKGWRLVTLPTSIPGSKTVAL*LHASPR
Trigger: CCGTGGTGAAGCATGAAGTCACAGGGCTACTGTTTT...GGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGTGCCTGTCAGAGTCCTaGGATCACAACAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSCLSES*DHNKNP
Trigger: AGGATTTTTGTTGTGATCTCAGGACTCTGACAGGCA...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GTCACGCGGGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTGCAGGCTATGCGTaGCGTGGCGCTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VTRAICRLCVTWRLFLPGFAGYA*RGACSF
Trigger: GAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAA...ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCCCATCCCCGGGTCCCTaGTGTGGGAAGGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLPSPGP*CGKGKS
Trigger: GCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGG...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CTGACATGCCTTCAGAGACAGAGCTATTCACCACCGCGAAGCAATTCTTCACCACGGCTGGCCCCGGACTaGCCTCGCTGTGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LTCLQRQSYSPPRSNSSPRLAPD*PRCVAA
Trigger: TGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCG...TGGTGAAGAATTGCTTCGCGGTGGTGAATAGCTCTGTCTCTGAAGGCATGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
CDS-3UTR GCA 90 bp CATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCTCACAACAAAAATCCTaGGAGGACTCGGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HPAKGWRLVTLPTSIPGSSQQKS*EDSAQL
Trigger: CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGA...GGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp GGCGTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACCCAAGCTCCATCCTaGCAAAGGCTGGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GVSSLTALSSVQRSLGSPTQAPS*QRLEAG
Trigger: ACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT...GGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATGTGGCTGCAAAGCCCTaGAGACCCAAGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHVAAKP*RPKLHP
Trigger: AGGATGGAGCTTGGGTCTGCAGGGCTTTGCAGCCAC...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp TCTAGATACTGTTGTTGCCTGCTCATGGCTCCCAGTCTGAGGCCTTCTCTCTTGCGCGTTGCCGGTGTGTaGCCGCAGCACCGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SRYCCCLLMAPSLRPSLLRVAGV*PQHRQE
Trigger: TTCCTGGCGGTGCTGCGGCCACACACCGGCAACGCG...CAAGAGAGAAGGCCTCAGACTGGGAGCCATGAGCAGGCAACAACAGTATCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CCA 90 bp TCTAGATACTGTTGTTGCCTGCTCATGGCTCCCAGTCTGAGGCCTTCTCTCTTGCCTGCAGCCTCTAGATaGGCCCGAACGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SRYCCCLLMAPSLRPSLLPAASR*ARTRWA
Trigger: GGCCCAGCGCGTTCGGGCCCATCTAGAGGCTGCAGG...CAAGAGAGAAGGCCTCAGACTGGGAGCCATGAGCAGGCAACAACAGTATCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CCA 90 bp CATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCTTCCCTTGTAAACACTaGATCGACCCACTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: HPAKGWRLVTLPTSIPGSFPCKH*IDPLRL
Trigger: CAAGCGCAGTGGGTCGATCCAGTGTTTACAAGGGAA...GGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281703.11
CDS-3UTR CCA 90 bp AACACTGGATCGACTTCAGGACCCACAATCACCAGGTGCACATTGGGCTCCTCCGGGAAGAGCCCACCCTaGACCCAAAGCCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: NTGSTSGPTITRCTLGSSGKSPP*TQSLRP
Trigger: AGGCCTGAGGCTTTGGGTCCAGGGTGGGCTCTTCCC...GGAGGAGCCCAATGTGCACCTGGTGATTGTGGGTCCTGAAGTCGATCCAGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441390.6
CDS-3UTR TCA 90 bp CATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAAAAACAGTAGCCCTGTaGCTTCATGCTTCACCACGG +
Preference number: 4 (lower is better)
Translates to: HYHDGAAGPGLTSLCGCKKTVAL*LHASPR
Trigger: CCGTGGTGAAGCATGAAGTCACAGGGCTACTGTTTT...TTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp TACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCTCCACCTGCCATGAATaGTACATTCTCACGTATTCC +
Preference number: 4 (lower is better)
Translates to: YHDGAAGPGLTSLCGCKASTCHE*YILTYS
Trigger: GGAATACGTGAGAATGTATCATTCATGGCAGGTGGA...GGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGTCCACCTGCCATGAATaGTACATTCTCACGTATTCC +
Preference number: 4 (lower is better)
Translates to: PAKGWRLVTLPTSIPGSLSTCHE*YILTYS
Trigger: GGAATACGTGAGAATGTATCATTCATGGCAGGTGGA...CAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp CGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGGGATTCGGTGGCCTTaGAAAAGCCTGCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: RFLVFREASGHPRACQSPGIRWP*KSLPPL
Trigger: TAGGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCC...AGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTACCCAAGCTCCATCCTaGCAAAGGCTGGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RFLVFREASGHPRACQSPTQAPS*QRLEAG
Trigger: ACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT...AGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTACCTCGCTGTGTGGCTaGAAAGCCCTGCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: HSQRFLVFREASGHPRACTSLCG*KALQTQ
Trigger: TTGGGTCTGCAGGGCTTTGCAGCCACACAGCGAGGT...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CTGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCACGCACAGAAGGATATaGGATGAATGCAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LDPKPQASISGSRGRFAGTHRRI*DECSGS
Trigger: AGAGCCACTGCATTCATCCCATATCCTTCTGTGCGT...GCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp GTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGCACCTCCATCAGGACTaGCTGGTGAACACGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VALVPSWFSTQIQPRGGRHLHQD*LVNTPG
Trigger: CCCAGGCGTGTTCACCAGCCAGTCCTGATGGAGGTG...CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTTCAAACTGGCAACGATaGGGAGAGGTTGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: WTQSLRPPSQGHAGDLQASNWQR*GEVGQK
Trigger: CTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGA...AGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp TTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGACATCCTGCCAAAGGCTaGAGGCTGGTGACCCTTCCG +
Preference number: 4 (lower is better)
Translates to: FAFQTGNDGERLVRRQAGHPAKG*RLVTLP
Trigger: CGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG...TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp TTTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGCATCCTGCCAAAGGCTaGAGGCTGGTGACCCTTCCG +
Preference number: 4 (lower is better)
Translates to: FCLSNWQRWGEVGQKAGGHPAKG*RLVTLP
Trigger: CGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG...CCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACTGACCTCGCTGTGTaGCTGCAAAGCCCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LVFREASGHPRACQSPEITDLAV*LQSPAD
Trigger: GTCTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGT...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp TCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTATGCGTGACGTGGCCTTCATTGACTCTGTaGAAGCGACAGCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: SGLHLRVTRAICRLCVTWPSLTL*KRQQIW
Trigger: CCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGG...CCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000442111.6
CDS-3UTR TCA 90 bp TACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCTCTTTCCACCTGCCATaGATGATACATTCTCACGTA +
Preference number: 4 (lower is better)
Translates to: YHDGAAGPGLTSLCGCKASFHLP*MIHSHV
Trigger: TACGTGAGAATGTATCATTCATGGCAGGTGGAAAGA...GGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGTCTTTCCACCTGCCATaGATGATACATTCTCACGTA +
Preference number: 4 (lower is better)
Translates to: PAKGWRLVTLPTSIPGSLSFHLP*MIHSHV
Trigger: TACGTGAGAATGTATCATTCATGGCAGGTGGAAAGA...CAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp AGCAGGTGTCTGATGAGGCGGGGCCCTCAATCTTCAGTGCTTCCTTCCAGCTTCGCCTGGGACAGCATCTaGACGCACAGAAGGATATGG +
Preference number: 4 (lower is better)
Translates to: SRCLMRRGPQSSVLPSSFAWDSI*THRRIW
Trigger: CCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGC...GAAGCTGGAAGGAAGCACTGAAGATTGAGGGCCCCGCCTCATCAGACACCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
CDS-3UTR TCA 90 bp TTTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGATCAGGACTGGCTGGTaGACACGCCTGGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: FCLSNWQRWGEVGQKAGGIRTGW*TRLGQH
Trigger: ATGCTGTCCCAGGCGTGTTCACCAGCCAGTCCTGAT...CCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTATCAGGACTGGCTGGTaGACACGCCTGGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: GDLQAMRDVALVPSWFSTIRTGW*TRLGQH
Trigger: ATGCTGTCCCAGGCGTGTTCACCAGCCAGTCCTGAT...AGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAGCCCACCCTGTGCCTGTCAGAGTCCTaGGATCACAACAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: LPTSIPGSLMWEGEEPTLCLSES*DHNKNP
Trigger: AGGATTTTTGTTGTGATCTCAGGACTCTGACAGGCA...CAGGGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp TTTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGTCCACCATTGAAAAGTaGGCTGTGCCGGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: FCLSNWQRWGEVGQKAGGSTIEK*AVPGVS
Trigger: GCTCACGCCCGGCACAGCTCACTTTTCAATGGTGGA...CCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACATCCACCATTGAAAAGTaGGCTGTGCCGGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: FREASGHPRACQSPEITTSTIEK*AVPGVS
Trigger: GCTCACGCCCGGCACAGCTCACTTTTCAATGGTGGA...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGATTTCAATTCCACCATTaGAAAGTGAGCTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: AGDPSDIHPRVPDVGRGRFQFHH*KVSCAG
Trigger: CCCGGCACAGCTCACTTTTCAATGGTGGAATTGAAA...TCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTTTTGCAGGCTATGCGTaGCGTGGCGCTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HSQRFLVFREASGHPRACFAGYA*RGACSF
Trigger: GAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAA...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCCTGCAGTTAATCTCAGAGCGTTaGAGAAAGGTATTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: DGAAGPGLTSLCGCKALQLISER*RKVFQL
Trigger: TAACTGGAATACCTTTCTTCAACGCTCTGAGATTAA...CTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp GTCACGCGGGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTAGGATATGGGATGAATaGAGTGGCTCTGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: VTRAICRLCVTWRLFLPGRIWDE*SGSGDS
Trigger: TGAGTCCCCAGAGCCACTGCATTCATCCCATATCCT...ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCGCGATTTGCAGGCTATaGGTGACGTGGCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LVFREASGHPRACQSPEIAICRL*VTWRLF
Trigger: GAACAAGCGCCACGTCACGCATAGCCTGCAAATCGC...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp GGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTGTGGCTGCAAAGCCCTaGAGACCCAAGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: GDLQAMRDVALVPSWFSTVAAKP*RPKLHP
Trigger: AGGATGGAGCTTGGGTCTGCAGGGCTTTGCAGCCAC...AGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp GCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAAAGCGACAGCAAATCTaGCTTCCTCAAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: AGDPSDIHPRVPDVGRGRKRQQI*LPQELC
Trigger: GCAGAGTTCTTGAGGAAGCCAGATTTGCTGTCGCTT...TCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000442111.6
CDS-3UTR CCA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATTCCCGGGGATGTTCCTaGCCAATACCGGTACTTCTA +
Preference number: 4 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHSRGCS*PIPVLL
Trigger: TAGAAGTACCGGTATTGGCCAGGAACATCCCCGGGA...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAACGCACAGAAGGATATaGGATGAATGCAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: HYHDGAAGPGLTSLCGCKTHRRI*DECSGS
Trigger: AGAGCCACTGCATTCATCCCATATCCTTCTGTGCGT...TTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACCACCTCCATCAGGACTaGCTGGTGAACACGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHHLHQD*LVNTPG
Trigger: CCCAGGCGTGTTCACCAGCCAGTCCTGATGGAGGTG...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAAGTTCTCAGCCAAGATaGGGTTTGCAATCTCAGATC +
Preference number: 4 (lower is better)
Translates to: AGDPSDIHPRVPDVGRGRSSQPR*GLQSQI
Trigger: GATCTGAGATTGCAAACCTCATCTTGGCTGAGAACT...TCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTAGTTCTCAGCCAAGATaGGGTTTGCAATCTCAGATC +
Preference number: 4 (lower is better)
Translates to: WTQSLRPPSQGHAGDLQASSQPR*GLQSQI
Trigger: GATCTGAGATTGCAAACCTCATCTTGGCTGAGAACT...AGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GTCACGCGGGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTGCGTGCAGATCTTCTTaGGGCATCTCTCCAATCAAT +
Preference number: 4 (lower is better)
Translates to: VTRAICRLCVTWRLFLPGACRSS*GISPIN
Trigger: ATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGC...ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCCAGAACTCTGTCTCTaGGTGTGCACCCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GDLQAMRDVALVPSWFSTPELCL*VCTQSC
Trigger: ACAGCTCTGGGTGCACACTCAGAGACAGAGTTCTGG...AGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACACCAGAACTCTGTCTCTaGGTGTGCACCCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FREASGHPRACQSPEITTPELCL*VCTQSC
Trigger: ACAGCTCTGGGTGCACACTCAGAGACAGAGTTCTGG...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCCAGAAGGATATGGGATaGATGCAGTGGCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LVFREASGHPRACQSPEIQKDMG*MQWLWG
Trigger: TCCCCAGAGCCACTGCATTCATCCCATATCCTTCTG...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACAGCCTGGGACAGCATCTaGACGCACAGAAGGATATGG +
Preference number: 4 (lower is better)
Translates to: FREASGHPRACQSPEITTAWDSI*THRRIW
Trigger: CCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGC...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp CAGAGACAGAGCTATTCACCACCGCGAAGCAATTCTTCACCACCGCGTGCAGATATCAGGACTGGCTGGTaGACACGCCTGGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: QRQSYSPPRSNSSPPRADIRTGW*TRLGQH
Trigger: ATGCTGTCCCAGGCGTGTTCACCAGCCAGTCCTGAT...ATCTGCACGCGGTGGTGAAGAATTGCTTCGCGGTGGTGAATAGCTCTGTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
CDS-3UTR TCA 90 bp CATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAATGCCTGTCAGAGTCCTaGGATCACAACAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: HYHDGAAGPGLTSLCGCKCLSES*DHNKNP
Trigger: AGGATTTTTGTTGTGATCTCAGGACTCTGACAGGCA...TTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAGGAAGGCTGGAGGCTGGTaGCCCTTCCGACATCCATCC +
Preference number: 4 (lower is better)
Translates to: ECSGSGDSRLTFSRIPLRKAGGW*PFRHPS
Trigger: GGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTT...CCTCAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp AGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTAAGGCTGGAGGCTGGTaGCCCTTCCGACATCCATCC +
Preference number: 4 (lower is better)
Translates to: SPEITTKILRGLGSADTSKAGGW*PFRHPS
Trigger: GGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTT...AGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAAGCGATTCTATTACATaGTGGAGGCAGCGGAATGAA +
Preference number: 4 (lower is better)
Translates to: AGDPSDIHPRVPDVGRGRSDSIT*WRQRNE
Trigger: TTCATTCCGCTGCCTCCATCATGTAATAGAATCGCT...TCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281703.11
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTTTCAAAACGCACACGTaGCCTGCAGCCTCTAGATGG +
Preference number: 4 (lower is better)
Translates to: HSQRFLVFREASGHPRACFKTHT*PAASRW
Trigger: CCATCTAGAGGCTGCAGGGCACGTGTGCGTTTTGAA...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp TCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTATGCGTGACGTGGAGCCAAGATGAGGTTTaGAATCTCAGATCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SGLHLRVTRAICRLCVTWSQDEV*NLRSAF
Trigger: GAAAGCCGATCTGAGATTGCAAACCTCATCTTGGCT...CCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp GACAGAGCTATTCACCACCGCGAAGCAATTCTTCACCACCGCGTGCAGATCTTCGGGATTCGGTGGCCTTaGAAAAGCCTGCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: DRAIHHREAILHHRVQIFGIRWP*KSLPPL
Trigger: TAGGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCC...GAAGATCTGCACGCGGTGGTGAAGAATTGCTTCGCGGTGGTGAATAGCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
CDS-3UTR GCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACTGGATCGACCCACTaGGCTTGTGCCATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LVFREASGHPRACQSPEITGSTH*ACAISF
Trigger: GAAGGAAATGGCACAAGCGCAGTGGGTCGATCCAGT...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281703.11
CDS-3UTR GCA 90 bp CATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCAAATTGCAGCTGACATaGCTTCAGAGACAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: HPAKGWRLVTLPTSIPGSKLQLT*LQRQSY
Trigger: ATAGCTCTGTCTCTGAAGGCATGTCAGCTGCAATTT...GGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp GGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAACCCAGTCACTCATaGACCTCCATCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GDLQAMRDVALVPSWFSTQPSHS*TSIRTG
Trigger: GCCAGTCCTGATGGAGGTGCATGAGTGACTGGGTTG...AGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp GTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGCAACCCAGTCACTCATaGACCTCCATCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: VALVPSWFSTQIQPRGGRQPSHS*TSIRTG
Trigger: GCCAGTCCTGATGGAGGTGCATGAGTGACTGGGTTG...CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp CATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCGTCTGTTTTGCTTTTaGCTTTCAAACTGGCAACGA +
Preference number: 4 (lower is better)
Translates to: HPAKGWRLVTLPTSIPGSRLFCF*LSNWQR
Trigger: TCGTTGCCAGTTTGAAAGGCAAAAGCAAAACAGACG...GGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACAGCGATTTGCAGGCTATaGGTGACGTGGCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: FREASGHPRACQSPEITTAICRL*VTWRLF
Trigger: GAACAAGCGCCACGTCACGCATAGCCTGCAAATCGC...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp TTTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGGCGATTTGCAGGCTATaGGTGACGTGGCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: FCLSNWQRWGEVGQKAGGAICRL*VTWRLF
Trigger: GAACAAGCGCCACGTCACGCATAGCCTGCAAATCGC...CCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTGGCGTTTGGTGTTGTTaGAATTCCTGGGTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: WTQSLRPPSQGHAGDLQAGVWCC*NSWVKE
Trigger: TTCTTTGACCCAGGAATTGCAACAACACCAAACGCC...AGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413816.6
CDS-3UTR CCA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGCCAAAAGGGATTCGGTaGCCTTGCAAAAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTPKGIR*PCKSLP
Trigger: AGGCAGGCTTTTGCAAGGCCACCGAATCCCTTTTGG...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCCAAAAGGGATTCGGTaGCCTTGCAAAAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: HSQRFLVFREASGHPRACPKGIR*PCKSLP
Trigger: AGGCAGGCTTTTGCAAGGCCACCGAATCCCTTTTGG...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp GTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACATCCCGGGGATGTTCCTaGCCAATACCGGTACTTCTA +
Preference number: 4 (lower is better)
Translates to: VFREASGHPRACQSPEITSRGCS*PIPVLL
Trigger: TAGAAGTACCGGTATTGGCCAGGAACATCCCCGGGA...TGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp GTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGAGGCTATGCGTGACGTaGCGCTTGTTCCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VALVPSWFSTQIQPRGGRRLCVT*RLFLPG
Trigger: ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCT...CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
3UTR CAA 72 bp CGCGAAGCAATTCTTCACCACCGCGTGCAGATCTTCTaGAGGCATCTCTCCAATCAATCGTACCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: REAILHHRVQIF*RHLSNQSYPSG
Trigger: GCCGCTGGGGTACGATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGCGGTGGTGAAGAATTGCTTCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
CDS-3UTR TCA 90 bp AGAAGTTTTTCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGCACATTGGGGAACGCGCTGGGCCGTaGCCGCGTTGCCGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RSFSFNVFRTHNHQVHIGERAGP*PRCRCV
Trigger: CACACACCGGCAACGCGGTCACGGCCCAGCGCGTTC...CCCAATGTGCACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGAAAAACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR TCA 90 bp GGCGTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCCCTTCATTGACTCTGTaGAAGCGACAGCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: GVSSLTALSSVQRSLGSPPSLTL*KRQQIW
Trigger: CCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGG...GGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCACGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAAAAACAGTAGCCCTGTaGCTTCATGCTTCACCACGG +
Preference number: 4 (lower is better)
Translates to: VFREASGHPRACQSPEITKTVAL*LHASPR
Trigger: CCGTGGTGAAGCATGAAGTCACAGGGCTACTGTTTT...TGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAAGAGGCTGGTTTTATTTaGACTGCACTGGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQEAGFI*TALGPR
Trigger: ACGTGGGCCCAGTGCAGTTCAAATAAAACCAGCCTC...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGAGGACTCGGCTCAGCTaGCACGTCTGTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTRTRLS*HVCFAF
Trigger: AAAAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCT...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCATCCACCATTGAAAAGTaGGCTGTGCCGGGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: AMRDVALVPSWFSTQIQPSTIEK*AVPGVS
Trigger: GCTCACGCCCGGCACAGCTCACTTTTCAATGGTGGA...TGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCCATCCCCGGGTCCCTaGTGTGGGAAGGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSPSPGP*CGKGKS
Trigger: GCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGG...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACATTCAAAACGCACACGTaGCCTGCAGCCTCTAGATGG +
Preference number: 4 (lower is better)
Translates to: FREASGHPRACQSPEITTFKTHT*PAASRW
Trigger: CCATCTAGAGGCTGCAGGGCACGTGTGCGTTTTGAA...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGGCCTTGCAAAAGCCTaGCTCCCCTATAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: RFLVFREASGHPRACQSPGLAKA*LPYRDE
Trigger: TTCATCTCTATAGGGGAGGCAGGCTTTTGCAAGGCC...AGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCGGCCTTGCAAAAGCCTaGCTCCCCTATAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: LVFREASGHPRACQSPEIGLAKA*LPYRDE
Trigger: TTCATCTCTATAGGGGAGGCAGGCTTTTGCAAGGCC...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAGGGGGATTCGGTGGCCTTaGAAAAGCCTGCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: ECSGSGDSRLTFSRIPLRGIRWP*KSLPPL
Trigger: TAGGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCC...CCTCAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp TCTAGATACTGTTGTTGCCTGCTCATGGCTCCCAGTCTGAGGCCTTCTCTCTTGGGGATTCGGTGGCCTTaGAAAAGCCTGCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: SRYCCCLLMAPSLRPSLLGIRWP*KSLPPL
Trigger: TAGGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCC...CAAGAGAGAAGGCCTCAGACTGGGAGCCATGAGCAGGCAACAACAGTATCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR GCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCAGGATATGGGATGAATaGAGTGGCTCTGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: LVFREASGHPRACQSPEIRIWDE*SGSGDS
Trigger: TGAGTCCCCAGAGCCACTGCATTCATCCCATATCCT...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACCAACCCAGTCACTCATaGACCTCCATCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHQPSHS*TSIRTG
Trigger: GCCAGTCCTGATGGAGGTGCATGAGTGACTGGGTTG...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp TCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTATGCGTGACGTGGCGTCTGTTTTGCTTTTaGCTTTCAAACTGGCAACGA +
Preference number: 4 (lower is better)
Translates to: SGLHLRVTRAICRLCVTWRLFCF*LSNWQR
Trigger: TCGTTGCCAGTTTGAAAGGCAAAAGCAAAACAGACG...CCACGTCACGCATAGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp CTGGTTTTATTTGAACTGCACTGGGCCCACGTGATCCAGAACTCTGTCTCTGAGGTCACGCGGGCGATTTaGAGGCTATGCGTGACGTGG +
Preference number: 4 (lower is better)
Translates to: LVLFELHWAHVIQNSVSEVTRAI*RLCVTW
Trigger: CCACGTCACGCATAGCCTGCAAATCGCCCGCGTGAC...CTCAGAGACAGAGTTCTGGATCACGTGGGCCCAGTGCAGTTCAAATAAAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp ACGGCAGCATTCCCGGGGATGTTCCTGGCCAATACCGGTACTTCTAAATCCATTACCCAAGCTCCATCCTaGCAAAGGCTGGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TAAFPGMFLANTGTSKSITQAPS*QRLEAG
Trigger: ACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT...AATGGATTTAGAAGTACCGGTATTGGCCAGGAACATCCCCGGGAATGCTGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
CDS-3UTR CCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGCACCTCCATCAGGACTaGCTGGTGAACACGCCTGGG +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLHLHQD*LVNTPG
Trigger: CCCAGGCGTGTTCACCAGCCAGTCCTGATGGAGGTG...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp CCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCGTTAAAAGCGGCGTTTaGTGTTGTTGCAATTCCTGG +
Preference number: 4 (lower is better)
Translates to: PKLHPAKGWRLVTLPTSIVKSGV*CCCNSW
Trigger: CCAGGAATTGCAACAACACCAAACGCCGCTTTTAAC...GATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413816.6
3UTR CAA 72 bp CGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTTaGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RGLGSADTSVLL*PFKLATMGRGW
Trigger: CCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
3UTR CAA 72 bp ACGCGGGCGATTTGCAGGCTATGCGTGACGTGGCGCTaGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: TRAICRLCVTWR*FLPGFPLKFSQ
Trigger: TTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATAGTTCTCAGCCAAGATaGGGTTTGCAATCTCAGATC +
Preference number: 4 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHSSQPR*GLQSQI
Trigger: GATCTGAGATTGCAAACCTCATCTTGGCTGAGAACT...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGCGTGCAGATCTTCTTaGGGCATCTCTCCAATCAAT +
Preference number: 4 (lower is better)
Translates to: RFLVFREASGHPRACQSPACRSS*GISPIN
Trigger: ATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGC...AGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCGAGGCTGGTTTTATTTaGACTGCACTGGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLEAGFI*TALGPR
Trigger: ACGTGGGCCCAGTGCAGTTCAAATAAAACCAGCCTC...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACAAGGACTCGGCTCAGCTaGCACGTCTGTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: FREASGHPRACQSPEITTRTRLS*HVCFAF
Trigger: AAAAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCT...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTGAGCTGTGCCGGGCGTaGGCTCACTCACAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSELCRA*AHSQRF
Trigger: AAAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTC...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCTTTCAATTCCACCATTaGAAAGTGAGCTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LVFREASGHPRACQSPEIFQFHH*KVSCAG
Trigger: CCCGGCACAGCTCACTTTTCAATGGTGGAATTGAAA...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAGGTTTGCAGGCTATGCGTaGCGTGGCGCTTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ECSGSGDSRLTFSRIPLRFAGYA*RGACSF
Trigger: GAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAA...CCTCAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp AGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTACCCCAGCGGCTCTaGAACACAAAGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SPEITTKILRGLGSADTSVPQRL*NTKQEE
Trigger: CTCTTCCTGCTTTGTGTTTCAGAGCCGCTGGGGTAC...AGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413816.6
CDS-3UTR GCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGGGGATTCGGTGGCCTTaGAAAAGCCTGCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLGIRWP*KSLPPL
Trigger: TAGGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCC...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GTCACGCGGGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTACTAACCAGTCTCTTTaGCAGATGAACAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: VTRAICRLCVTWRLFLPGTNQSL*QMNKLL
Trigger: CAGGAGTTTGTTCATCTGGCAAAGAGACTGGTTAGT...ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCCCGCGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp GTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGAGGATATGGGATGAATaGAGTGGCTCTGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: VALVPSWFSTQIQPRGGRRIWDE*SGSGDS
Trigger: TGAGTCCCCAGAGCCACTGCATTCATCCCATATCCT...CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp GAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAGGCAACCCAGTCACTCATaGACCTCCATCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: ECSGSGDSRLTFSRIPLRQPSHS*TSIRTG
Trigger: GCCAGTCCTGATGGAGGTGCATGAGTGACTGGGTTG...CCTCAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp TTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGATCACAACAAAAATCCTaGGAGGACTCGGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FAFQTGNDGERLVRRQAGSQQKS*EDSAQL
Trigger: CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGA...TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGACCTCGCTGTGTGGCTaGAAAGCCCTGCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLTSLCG*KALQTQ
Trigger: TTGGGTCTGCAGGGCTTTGCAGCCACACAGCGAGGT...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGGGCGTTTGGTGTTGTTaGAATTCCTTGACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTGVWCC*NSLTLD
Trigger: GTCCAGAGTCAAGGAATTGCAACAACACCAAACGCC...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGTCTTGCTTTCCACTaGGCTTGTGCCATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTCLAFH*ACAISF
Trigger: GAAGGAAATGGCACAAGCGCAGTGGAAAGCAAGACA...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537468.1
CDS-3UTR CCA 90 bp GTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACGCACAGAAGGATATaGGATGAATGCAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VFREASGHPRACQSPEITTHRRI*DECSGS
Trigger: AGAGCCACTGCATTCATCCCATATCCTTCTGTGCGT...TGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTCACCTCCATCAGGACTaGCTGGTGAACACGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ITTKILRGLGSADTSVLLHLHQD*LVNTPG
Trigger: CCCAGGCGTGTTCACCAGCCAGTCCTGATGGAGGTG...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATGCGCTTGTTCCTTCCTaGTTTTCCACTCAAATTCAG +
Preference number: 4 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHALVPS*FSTQIQ
Trigger: CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGC...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp GGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAGGGAAGAGCCCACCCTaGACCCAAAGCCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GRSLNHDCLKISLYCPHQGKSPP*TQSLRP
Trigger: AGGCCTGAGGCTTTGGGTCCAGGGTGGGCTCTTCCC...TTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGACTGACCTCGCTGTGTaGCTGCAAAGCCCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLTDLAV*LQSPAD
Trigger: GTCTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGT...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGCCTTCATTGACTCTGTaGAAGCGACAGCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: VALVPSWFSTQIQPRGGRPSLTL*KRQQIW
Trigger: CCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGG...CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000442111.6
CDS-3UTR TCA 90 bp TTTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGCCTTCATTGACTCTGTaGAAGCGACAGCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: FCLSNWQRWGEVGQKAGGPSLTL*KRQQIW
Trigger: CCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGG...CCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGCTCCAAAATTGCAGCTaGCATGCCTTCAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: VALVPSWFSTQIQPRGGRLQNCS*HAFRDR
Trigger: TCTGTCTCTGAAGGCATGTCAGCTGCAATTTTGGAG...CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATTCTTTCCACCTGCCATaGATGATACATTCTCACGTA +
Preference number: 4 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHSFHLP*MIHSHV
Trigger: TACGTGAGAATGTATCATTCATGGCAGGTGGAAAGA...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGGAGGCTGGTTTTATTTaGACTGCACTGGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQEAGFI*TALGPR
Trigger: ACGTGGGCCCAGTGCAGTTCAAATAAAACCAGCCTC...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAGAGGAGTCTGAACCATaGCTGCTTGAAAATAAGCCT +
Preference number: 4 (lower is better)
Translates to: VFREASGHPRACQSPEITEESEP*LLENKP
Trigger: AGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTC...TGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTTGCCTGTCAGAGTCCTaGGATCACAACAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: HSQRFLVFREASGHPRACCLSES*DHNKNP
Trigger: AGGATTTTTGTTGTGATCTCAGGACTCTGACAGGCA...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATGAGCTGTGCCGGGCGTaGGCTCACTCACAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNELCRA*AHSQRF
Trigger: AAAGCGCTGTGAGTGAGCTCACGCCCGGCACAGCTC...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCCAGGAACTGCACTTGTaGCAGCCAATGAGATCTGTC +
Preference number: 4 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLQELHL*QPMRSV
Trigger: GACAGATCTCATTGGCTGTCACAAGTGCAGTTCCTG...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537468.1
CDS-3UTR GCA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGTTCAAAACGCACACGTaGCCTGCAGCCTCTAGATGG +
Preference number: 4 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQFKTHT*PAASRW
Trigger: CCATCTAGAGGCTGCAGGGCACGTGTGCGTTTTGAA...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp CGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTAGCCAAGATGAGGTTTaGAATCTCAGATCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RFLVFREASGHPRACQSPSQDEV*NLRSAF
Trigger: GAAAGCCGATCTGAGATTGCAAACCTCATCTTGGCT...AGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCAAATTGCAGCTGACATaGCTTCAGAGACAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: ALSSVQRSLGSPTCLSESKLQLT*LQRQSY
Trigger: ATAGCTCTGTCTCTGAAGGCATGTCAGCTGCAATTT...GGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GGCGTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACTAACCAGTCTCTTTaGCAGATGAACAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: GVSSLTALSSVQRSLGSPTNQSL*QMNKLL
Trigger: CAGGAGTTTGTTCATCTGGCAAAGAGACTGGTTAGT...GGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGCAACCCAGTCACTCATaGACCTCCATCAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLQPSHS*TSIRTG
Trigger: GCCAGTCCTGATGGAGGTGCATGAGTGACTGGGTTG...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAAGTCTGAACCATGACTaGTTGAAAATAAGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: HYHDGAAGPGLTSLCGCKSLNHD*LKISLY
Trigger: ATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACT...TTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp CAGAGACAGAGCTATTCACCACCGCGAAGCAATTCTTCACCACCGCGTGCAGATTCACAACAAAAATCCTaGGAGGACTCGGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QRQSYSPPRSNSSPPRADSQQKS*EDSAQL
Trigger: CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGA...ATCTGCACGCGGTGGTGAAGAATTGCTTCGCGGTGGTGAATAGCTCTGTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
CDS-3UTR GCA 90 bp GGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAGTCACGCGGGCGATTTaGAGGCTATGCGTGACGTGG +
Preference number: 4 (lower is better)
Translates to: GRSLNHDCLKISLYCPHQVTRAI*RLCVTW
Trigger: CCACGTCACGCATAGCCTGCAAATCGCCCGCGTGAC...TTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTGTGGCTGCAAAGCCCTaGAGACCCAAGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: ITTKILRGLGSADTSVLLVAAKP*RPKLHP
Trigger: AGGATGGAGCTTGGGTCTGCAGGGCTTTGCAGCCAC...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp TTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGAGTTCAACATACCCACTaGGCTTGTGCCATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FAFQTGNDGERLVRRQAGVQHTH*ACAISF
Trigger: GAAGGAAATGGCACAAGCGCAGTGGGTATGTTGAAC...TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413816.6
CDS-3UTR GCA 90 bp CCTGTCAGAGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACCTTACCCTTAGCATaGGGCTGGCTTCCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: PVRVLRSQQKSCEDSAQLTLPLA*GWLPQE
Trigger: TTCTTGAGGAAGCCAGCCGCATGCTAAGGGTAAGGT...CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACTCTGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441390.6
CDS-3UTR CCA 90 bp CTGGTGAACACGCCTGGGACAGCATCTGAACGCACAGAAGGATATGGGATGAATTCCCGGGGATGTTCCTaGCCAATACCGGTACTTCTA +
Preference number: 4 (lower is better)
Translates to: LVNTPGTASERTEGYGMNSRGCS*PIPVLL
Trigger: TAGAAGTACCGGTATTGGCCAGGAACATCCCCGGGA...ATTCATCCCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGCGTGTTCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp GGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTACGCACAGAAGGATATaGGATGAATGCAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GDLQAMRDVALVPSWFSTTHRRI*DECSGS
Trigger: AGAGCCACTGCATTCATCCCATATCCTTCTGTGCGT...AGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAAACGCACAGAAGGATATaGGATGAATGCAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQTHRRI*DECSGS
Trigger: AGAGCCACTGCATTCATCCCATATCCTTCTGTGCGT...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTCAAACTGGCAACGATaGGGAGAGGTTGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLSNWQR*GEVGQK
Trigger: CTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGA...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp CCTGTCAGAGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGTCAAACTGGCAACGATaGGGAGAGGTTGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PVRVLRSQQKSCEDSAQLSNWQR*GEVGQK
Trigger: CTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGA...CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACTCTGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTGCGCTTGTTCCTTCCTaGTTTTCCACTCAAATTCAG +
Preference number: 4 (lower is better)
Translates to: HSQRFLVFREASGHPRACALVPS*FSTQIQ
Trigger: CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGC...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAGGCTATGCGTGACGTaGCGCTTGTTCCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLRLCVT*RLFLPG
Trigger: ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCT...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTAGTTCTCAGCCAAGATaGGGTTTGCAATCTCAGATC +
Preference number: 4 (lower is better)
Translates to: GDLQAMRDVALVPSWFSTSSQPR*GLQSQI
Trigger: GATCTGAGATTGCAAACCTCATCTTGGCTGAGAACT...AGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACCTCCAAAATTGCAGCTaGCATGCCTTCAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHLQNCS*HAFRDR
Trigger: TCTGTCTCTGAAGGCATGTCAGCTGCAATTTTGGAG...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAATCCACCTGCCATGAATaGTACATTCTCACGTATTCC +
Preference number: 4 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQSTCHE*YILTYS
Trigger: GGAATACGTGAGAATGTATCATTCATGGCAGGTGGA...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGGAGGCTGGTTTTATTTaGACTGCACTGGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLEAGFI*TALGPR
Trigger: ACGTGGGCCCAGTGCAGTTCAAATAAAACCAGCCTC...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTTTCTAGGATTCCGCTaGGGCTGGTTTTATTTGAAC +
Preference number: 4 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTFLGFR*GWFYLN
Trigger: GTTCAAATAAAACCAGCCTCAGCGGAATCCTAGAAA...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTTTTCTAGGATTCCGCTaGGGCTGGTTTTATTTGAAC +
Preference number: 4 (lower is better)
Translates to: HSQRFLVFREASGHPRACFLGFR*GWFYLN
Trigger: GTTCAAATAAAACCAGCCTCAGCGGAATCCTAGAAA...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGCAGAAGGATATGGGATaGATGCAGTGGCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLQKDMG*MQWLWG
Trigger: TCCCCAGAGCCACTGCATTCATCCCATATCCTTCTG...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp CTGGTTTTATTTGAACTGCACTGGGCCCACGTGATCCAGAACTCTGTCTCTGAGCAGAAGGATATGGGATaGATGCAGTGGCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LVLFELHWAHVIQNSVSEQKDMG*MQWLWG
Trigger: TCCCCAGAGCCACTGCATTCATCCCATATCCTTCTG...CTCAGAGACAGAGTTCTGGATCACGTGGGCCCAGTGCAGTTCAAATAAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp TTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGAGAGGAGTCTGAACCATaGCTGCTTGAAAATAAGCCT +
Preference number: 4 (lower is better)
Translates to: FAFQTGNDGERLVRRQAGEESEP*LLENKP
Trigger: AGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTC...TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTGAGGAGTCTGAACCATaGCTGCTTGAAAATAAGCCT +
Preference number: 4 (lower is better)
Translates to: GDLQAMRDVALVPSWFSTEESEP*LLENKP
Trigger: AGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTC...AGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CTGGTGAACACGCCTGGGACAGCATCTGAACGCACAGAAGGATATGGGATGAATAGGACTCGGCTCAGCTaGCACGTCTGTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LVNTPGTASERTEGYGMNRTRLS*HVCFAF
Trigger: AAAAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCT...ATTCATCCCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGCGTGTTCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGAGGTGGGCGGTGCCTGTCAGAGTCCTaGGATCACAACAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: VALVPSWFSTQIQPRGGRCLSES*DHNKNP
Trigger: AGGATTTTTGTTGTGATCTCAGGACTCTGACAGGCA...CCGCCCACCTCTTGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTTTCAATTCCACCATTaGAAAGTGAGCTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLFQFHH*KVSCAG
Trigger: CCCGGCACAGCTCACTTTTCAATGGTGGAATTGAAA...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp TCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGCACATTGGGCTCCTCCTGTTCAAAACGCACACGTaGCCTGCAGCCTCTAGATGG +
Preference number: 4 (lower is better)
Translates to: SFNVFRTHNHQVHIGLLLFKTHT*PAASRW
Trigger: CCATCTAGAGGCTGCAGGGCACGTGTGCGTTTTGAA...CAGGAGGAGCCCAATGTGCACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR GCA 90 bp CTGGTGAACACGCCTGGGACAGCATCTGAACGCACAGAAGGATATGGGATGAATGGCCTTGCAAAAGCCTaGCTCCCCTATAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: LVNTPGTASERTEGYGMNGLAKA*LPYRDE
Trigger: TTCATCTCTATAGGGGAGGCAGGCTTTTGCAAGGCC...ATTCATCCCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGCGTGTTCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTAAATTGCAGCTGACATaGCTTCAGAGACAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: HSQRFLVFREASGHPRACKLQLT*LQRQSY
Trigger: ATAGCTCTGTCTCTGAAGGCATGTCAGCTGCAATTT...ACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGAGGATATGGGATGAATaGAGTGGCTCTGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQRIWDE*SGSGDS
Trigger: TGAGTCCCCAGAGCCACTGCATTCATCCCATATCCT...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR GCA 90 bp CTGGTGAACACGCCTGGGACAGCATCTGAACGCACAGAAGGATATGGGATGAATTCACAACAAAAATCCTaGGAGGACTCGGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LVNTPGTASERTEGYGMNSQQKS*EDSAQL
Trigger: CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGA...ATTCATCCCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGCGTGTTCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGTTAGCATGCGGCCACTaGGCTTGTGCCATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLLACGH*ACAISF
Trigger: GAAGGAAATGGCACAAGCGCAGTGGCCGCATGCTAA...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442111.6
CDS-3UTR CCA 90 bp CCTGTCAGAGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGAAGCGACAGCAAATCTaGCTTCCTCAAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: PVRVLRSQQKSCEDSAQLKRQQI*LPQELC
Trigger: GCAGAGTTCTTGAGGAAGCCAGATTTGCTGTCGCTT...CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACTCTGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp CTGGTTTTATTTGAACTGCACTGGGCCCACGTGATCCAGAACTCTGTCTCTGAGTCCCGGGGATGTTCCTaGCCAATACCGGTACTTCTA +
Preference number: 4 (lower is better)
Translates to: LVLFELHWAHVIQNSVSESRGCS*PIPVLL
Trigger: TAGAAGTACCGGTATTGGCCAGGAACATCCCCGGGA...CTCAGAGACAGAGTTCTGGATCACGTGGGCCCAGTGCAGTTCAAATAAAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp CTGGTGAACACGCCTGGGACAGCATCTGAACGCACAGAAGGATATGGGATGAATTCAAACTGGCAACGATaGGGAGAGGTTGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LVNTPGTASERTEGYGMNSNWQR*GEVGQK
Trigger: CTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGA...ATTCATCCCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGCGTGTTCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp TTTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGGCGCTTGTTCCTTCCTaGTTTTCCACTCAAATTCAG +
Preference number: 4 (lower is better)
Translates to: FCLSNWQRWGEVGQKAGGALVPS*FSTQIQ
Trigger: CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGC...CCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp CCTGTCAGAGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGTTCCCTTGTAAACACTaGATCGACTTCAGGACCCAC +
Preference number: 4 (lower is better)
Translates to: PVRVLRSQQKSCEDSAQLFPCKH*IDFRTH
Trigger: GTGGGTCCTGAAGTCGATCCAGTGTTTACAAGGGAA...CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACTCTGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp GGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTATTGTCCACACCAACCTGCAGCCTCTAGATaGGCCAGTGTGTCGTCTGAC +
Preference number: 4 (lower is better)
Translates to: GRSLNHDCLKISLYCPHQPAASR*ASVSSD
Trigger: GTCAGACGACACACTGGCCCATCTAGAGGCTGCAGG...TTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537468.1
3UTR CAA 72 bp CAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTaGAAAATAAGCCTCTATTGTCCACACCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: QKAGGRSLNHDC*KISLYCPHQSP
Trigger: AGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGGCGTGCAGATCTTCTTaGGGCATCTCTCCAATCAAT +
Preference number: 4 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQACRSS*GISPIN
Trigger: ATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGC...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp CTGGTGAACACGCCTGGGACAGCATCTGAACGCACAGAAGGATATGGGATGAATCTCCAAAATTGCAGCTaGCATGCCTTCAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: LVNTPGTASERTEGYGMNLQNCS*HAFRDR
Trigger: TCTGTCTCTGAAGGCATGTCAGCTGCAATTTTGGAG...ATTCATCCCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGCGTGTTCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAAAACAGTAGCCCTGTaGCTTCATGCTTCACCACGG +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLKTVAL*LHASPR
Trigger: CCGTGGTGAAGCATGAAGTCACAGGGCTACTGTTTT...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACTCCACCTGCCATGAATaGTACATTCTCACGTATTCC +
Preference number: 4 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHSTCHE*YILTYS
Trigger: GGAATACGTGAGAATGTATCATTCATGGCAGGTGGA...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCCAGAACTCTGTCTCTaGGTGTGCACCCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSPELCL*VCTQSC
Trigger: ACAGCTCTGGGTGCACACTCAGAGACAGAGTTCTGG...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTTTTCTAGGATTCCGCTaGGGCTGGTTTTATTTGAAC +
Preference number: 4 (lower is better)
Translates to: GDLQAMRDVALVPSWFSTFLGFR*GWFYLN
Trigger: GTTCAAATAAAACCAGCCTCAGCGGAATCCTAGAAA...AGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAGCCTGGGACAGCATCTaGACGCACAGAAGGATATGG +
Preference number: 4 (lower is better)
Translates to: GRSLNHDCLKISLYCPHQAWDSI*THRRIW
Trigger: CCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGC...TTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAGGTTTCAATTCCACCATTaGAAAGTGAGCTGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: ECSGSGDSRLTFSRIPLRFQFHH*KVSCAG
Trigger: CCCGGCACAGCTCACTTTTCAATGGTGGAATTGAAA...CCTCAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCAGCCAAGATGAGGTTTaGAATCTCAGATCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLSQDEV*NLRSAF
Trigger: GAAAGCCGATCTGAGATTGCAAACCTCATCTTGGCT...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CAGGTAATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTGGGATTCGGTGGCCTTaGAAAAGCCTGCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: QVIKFSPKFPENQFPFPCGIRWP*KSLPPL
Trigger: TAGGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCC...ACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGATTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAGGATATGGGATGAATaGAGTGGCTCTGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLRIWDE*SGSGDS
Trigger: TGAGTCCCCAGAGCCACTGCATTCATCCCATATCCT...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATACCTCGCTGTGTGGCTaGAAAGCCCTGCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNTSLCG*KALQTQ
Trigger: TTGGGTCTGCAGGGCTTTGCAGCCACACAGCGAGGT...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp AGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTAAGCGACAGCAAATCTaGCTTCCTCAAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: SPEITTKILRGLGSADTSKRQQI*LPQELC
Trigger: GCAGAGTTCTTGAGGAAGCCAGATTTGCTGTCGCTT...AGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp CTGGTGAACACGCCTGGGACAGCATCTGAACGCACAGAAGGATATGGGATGAATAAGCGACAGCAAATCTaGCTTCCTCAAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: LVNTPGTASERTEGYGMNKRQQI*LPQELC
Trigger: GCAGAGTTCTTGAGGAAGCCAGATTTGCTGTCGCTT...ATTCATCCCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGCGTGTTCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp GACAGAGCTATTCACCACCGCGAAGCAATTCTTCACCACCGCGTGCAGATCTTCTTTTGCCTTTCAAACTaGCAACGATGGGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: DRAIHHREAILHHRVQIFFCLSN*QRWGEV
Trigger: AACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA...GAAGATCTGCACGCGGTGGTGAAGAATTGCTTCGCGGTGGTGAATAGCTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
CDS-3UTR CCA 90 bp GGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGGCTATGCGTGACGTaGCGCTTGTTCCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GRSLNHDCLKISLYCPHQRLCVT*RLFLPG
Trigger: ACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCT...TTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATGCCTGGGACAGCATCTaGACGCACAGAAGGATATGG +
Preference number: 4 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNAWDSI*THRRIW
Trigger: CCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGC...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCAAGCGATTCTATTACATaGTGGAGGCAGCGGAATGAA +
Preference number: 4 (lower is better)
Translates to: AMRDVALVPSWFSTQIQPSDSIT*WRQRNE
Trigger: TTCATTCCGCTGCCTCCATCATGTAATAGAATCGCT...TGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281703.11
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp AGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTACTTGTGACAGCCAATaGGATCTGTCTTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SPEITTKILRGLGSADTSTCDSQ*DLSCFP
Trigger: TGGAAAGCAAGACAGATCTCATTGGCTGTCACAAGT...AGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537468.1
CDS-3UTR GCA 90 bp GGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTATTGTCCACACCAATTCAAAACGCACACGTaGCCTGCAGCCTCTAGATGG +
Preference number: 4 (lower is better)
Translates to: GRSLNHDCLKISLYCPHQFKTHT*PAASRW
Trigger: CCATCTAGAGGCTGCAGGGCACGTGTGCGTTTTGAA...TTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCAAATTGCAGCTGACATaGCTTCAGAGACAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLKLQLT*LQRQSY
Trigger: ATAGCTCTGTCTCTGAAGGCATGTCAGCTGCAATTT...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCCGTCTGTTTTGCTTTTaGCTTTCAAACTGGCAACGA +
Preference number: 4 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLRLFCF*LSNWQR
Trigger: TCGTTGCCAGTTTGAAAGGCAAAAGCAAAACAGACG...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CAGGTAATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTGCGATTTGCAGGCTATaGGTGACGTGGCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: QVIKFSPKFPENQFPFPCAICRL*VTWRLF
Trigger: GAACAAGCGCCACGTCACGCATAGCCTGCAAATCGC...ACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGATTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp GGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTATTGTCCACACCAACCAAAAGGGATTCGGTaGCCTTGCAAAAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GRSLNHDCLKISLYCPHQPKGIR*PCKSLP
Trigger: AGGCAGGCTTTTGCAAGGCCACCGAATCCCTTTTGG...TTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTTCAAACTGGCAACGATaGGGAGAGGTTGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: ITTKILRGLGSADTSVLLSNWQR*GEVGQK
Trigger: CTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGA...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp AGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTTTTTGCCTTTCAAACTaGCAACGATGGGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SPEITTKILRGLGSADTSFCLSN*QRWGEV
Trigger: AACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA...AGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp TTCCAGTTAAAAGCGGCGTTTGGTGTTGTTGCAATTCCTGGGTCAAAGAAACAAACTGACCTCGCTGTGTaGCTGCAAAGCCCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: FQLKAAFGVVAIPGSKKQTDLAV*LQSPAD
Trigger: GTCTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGT...TTGTTTCTTTGACCCAGGAATTGCAACAACACCAAACGCCGCTTTTAACTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413816.6
CDS-3UTR TCA 90 bp CAGGTAATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCAGAAGGATATGGGATaGATGCAGTGGCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QVIKFSPKFPENQFPFPCQKDMG*MQWLWG
Trigger: TCCCCAGAGCCACTGCATTCATCCCATATCCTTCTG...ACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGATTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTAGGACTCGGCTCAGCTaGCACGTCTGTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSRTRLS*HVCFAF
Trigger: AAAAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCT...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAGCGATTCTATTACATaGTGGAGGCAGCGGAATGAA +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLSDSIT*WRQRNE
Trigger: TTCATTCCGCTGCCTCCATCATGTAATAGAATCGCT...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281703.11
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACATTAATCTCAGAGCGTTaGAGAAAGGTATTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: FREASGHPRACQSPEITTLISER*RKVFQL
Trigger: TAACTGGAATACCTTTCTTCAACGCTCTGAGATTAA...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp TCTAGATACTGTTGTTGCCTGCTCATGGCTCCCAGTCTGAGGCCTTCTCTCTTGATCAAGCACTGTACCTaGGATGTGATCATCAGAATG +
Preference number: 4 (lower is better)
Translates to: SRYCCCLLMAPSLRPSLLIKHCT*DVIIRM
Trigger: CATTCTGATGATCACATCTCAGGTACAGTGCTTGAT...CAAGAGAGAAGGCCTCAGACTGGGAGCCATGAGCAGGCAACAACAGTATCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR GCA 90 bp CTGGTTTTATTTGAACTGCACTGGGCCCACGTGATCCAGAACTCTGTCTCTGAGAGCCAAGATGAGGTTTaGAATCTCAGATCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LVLFELHWAHVIQNSVSESQDEV*NLRSAF
Trigger: GAAAGCCGATCTGAGATTGCAAACCTCATCTTGGCT...CTCAGAGACAGAGTTCTGGATCACGTGGGCCCAGTGCAGTTCAAATAAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp AGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTAAATTGCAGCTGACATaGCTTCAGAGACAGAGCTAT +
Preference number: 4 (lower is better)
Translates to: SPEITTKILRGLGSADTSKLQLT*LQRQSY
Trigger: ATAGCTCTGTCTCTGAAGGCATGTCAGCTGCAATTT...AGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp AGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTACTAACCAGTCTCTTTaGCAGATGAACAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: SPEITTKILRGLGSADTSTNQSL*QMNKLL
Trigger: CAGGAGTTTGTTCATCTGGCAAAGAGACTGGTTAGT...AGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CTGGTGAACACGCCTGGGACAGCATCTGAACGCACAGAAGGATATGGGATGAATACTAACCAGTCTCTTTaGCAGATGAACAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: LVNTPGTASERTEGYGMNTNQSL*QMNKLL
Trigger: CAGGAGTTTGTTCATCTGGCAAAGAGACTGGTTAGT...ATTCATCCCATATCCTTCTGTGCGTTCAGATGCTGTCCCAGGCGTGTTCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp TTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACAAGTCTGAACCATGACTaGTTGAAAATAAGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: FREASGHPRACQSPEITTSLNHD*LKISLY
Trigger: ATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACT...TGTTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAGGCGTCTGTTTTGCTTTTaGCTTTCAAACTGGCAACGA +
Preference number: 4 (lower is better)
Translates to: ECSGSGDSRLTFSRIPLRRLFCF*LSNWQR
Trigger: TCGTTGCCAGTTTGAAAGGCAAAAGCAAAACAGACG...CCTCAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTGGCGTTTGGTGTTGTTaGAATTCCTTGACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: ITTKILRGLGSADTSVLLGVWCC*NSLTLD
Trigger: GTCCAGAGTCAAGGAATTGCAACAACACCAAACGCC...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGTTTTGCCTTTCAAACTaGCAACGATGGGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLFCLSN*QRWGEV
Trigger: AACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTTTCCCTTGTAAACACTaGATCGACTTCAGGACCCAC +
Preference number: 4 (lower is better)
Translates to: ITTKILRGLGSADTSVLLFPCKH*IDFRTH
Trigger: GTGGGTCCTGAAGTCGATCCAGTGTTTACAAGGGAA...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAGCGTGCAGATCTTCTTaGGGCATCTCTCCAATCAAT +
Preference number: 4 (lower is better)
Translates to: GRSLNHDCLKISLYCPHQACRSS*GISPIN
Trigger: ATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGC...TTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTATTGTCCACACCAACTCCAAAATTGCAGCTaGCATGCCTTCAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: GRSLNHDCLKISLYCPHQLQNCS*HAFRDR
Trigger: TCTGTCTCTGAAGGCATGTCAGCTGCAATTTTGGAG...TTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATGGCCTTGCAAAAGCCTaGCTCCCCTATAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNGLAKA*LPYRDE
Trigger: TTCATCTCTATAGGGGAGGCAGGCTTTTGCAAGGCC...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CCTGTCAGAGTCCTGAGATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGAGTCTGAACCATGACTaGTTGAAAATAAGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: PVRVLRSQQKSCEDSAQLSLNHD*LKISLY
Trigger: ATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACT...CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGATCTCAGGACTCTGACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATTCACAACAAAAATCCTaGGAGGACTCGGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNSQQKS*EDSAQL
Trigger: CAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGA...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp TCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGCACATTGGGCTCCTCCTGGTTAAAAGCGGCGTTTaGTGTTGTTGCAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: SFNVFRTHNHQVHIGLLLVKSGV*CCCNSL
Trigger: CAAGGAATTGCAACAACACCAAACGCCGCTTTTAAC...CAGGAGGAGCCCAATGTGCACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CCA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTTTCCCTTGTAAACACTaGATCGACTTCAGGACCCAC +
Preference number: 4 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSFPCKH*IDFRTH
Trigger: GTGGGTCCTGAAGTCGATCCAGTGTTTACAAGGGAA...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATGCGTGCAGATCTTCTTaGGGCATCTCTCCAATCAAT +
Preference number: 4 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNACRSS*GISPIN
Trigger: ATTGATTGGAGAGATGCCTCAAGAAGATCTGCACGC...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTTTTCTAGGATTCCGCTaGGGCTGGTTTTATTTGAAC +
Preference number: 4 (lower is better)
Translates to: ITTKILRGLGSADTSVLLFLGFR*GWFYLN
Trigger: GTTCAAATAAAACCAGCCTCAGCGGAATCCTAGAAA...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCATTAATCTCAGAGCGTTaGAGAAAGGTATTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: AMRDVALVPSWFSTQIQPLISER*RKVFQL
Trigger: TAACTGGAATACCTTTCTTCAACGCTCTGAGATTAA...TGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR TCA 90 bp TCTAGATACTGTTGTTGCCTGCTCATGGCTCCCAGTCTGAGGCCTTCTCTCTTGTTAATCTCAGAGCGTTaGAGAAAGGTATTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: SRYCCCLLMAPSLRPSLLLISER*RKVFQL
Trigger: TAACTGGAATACCTTTCTTCAACGCTCTGAGATTAA...CAAGAGAGAAGGCCTCAGACTGGGAGCCATGAGCAGGCAACAACAGTATCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR GCA 90 bp AGAAGTTTTTCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGCACATTGGGGGCCTTGCAAAAGCCTaGCTCCCCTATAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: RSFSFNVFRTHNHQVHIGGLAKA*LPYRDE
Trigger: TTCATCTCTATAGGGGAGGCAGGCTTTTGCAAGGCC...CCCAATGTGCACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGAAAAACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR GCA 90 bp AGAAGTTTTTCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGCACATTGGGACCTTACCCTTAGCATaGGGCTGGCTTCCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: RSFSFNVFRTHNHQVHIGTLPLA*GWLPQE
Trigger: TTCTTGAGGAAGCCAGCCGCATGCTAAGGGTAAGGT...CCCAATGTGCACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGAAAAACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CCA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTGCGCTTGTTCCTTCCTaGTTTTCCACTCAAATTCAG +
Preference number: 4 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSALVPS*FSTQIQ
Trigger: CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGC...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CCA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTGTTAAAAGCGGCGTTTaGTGTTGTTGCAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: ITTKILRGLGSADTSVLLVKSGV*CCCNSL
Trigger: CAAGGAATTGCAACAACACCAAACGCCGCTTTTAAC...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp CATCAAACTAGAAGTTTTTCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGCCCTTAGCATGCGGCTaGCTTCCTCAAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: HQTRSFSFNVFRTHNHQVPLACG*LPQELC
Trigger: GCAGAGTTCTTGAGGAAGCCAGCCGCATGCTAAGGG...CACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGAAAAACTTCTAGTTTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539044.5
3UTR CAA 72 bp TGCCTGCTCATGGCTCCCAGTCTGAGGCCTTCTCTCTaGATTAGCCAGAATTTTAGCATCAAACTAGAAGTT +
Preference number: 4 (lower is better)
Translates to: CLLMAPSLRPSL*ISQNFSIKLEV
Trigger: AACTTCTAGTTTGATGCTAAAATTCTGGCTAATCAAGAGAGAAGGCCTCAGACTGGGAGCCATGAGCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR TCA 90 bp CAGGTAATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTAGTTCTCAGCCAAGATaGGGTTTGCAATCTCAGATC +
Preference number: 4 (lower is better)
Translates to: QVIKFSPKFPENQFPFPCSSQPR*GLQSQI
Trigger: GATCTGAGATTGCAAACCTCATCTTGGCTGAGAACT...ACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGATTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp CAGGTAATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTTCCACCTGCCATGAATaGTACATTCTCACGTATTCC +
Preference number: 4 (lower is better)
Translates to: QVIKFSPKFPENQFPFPCSTCHE*YILTYS
Trigger: GGAATACGTGAGAATGTATCATTCATGGCAGGTGGA...ACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGATTACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp GGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCTATTGTCCACACCAATCTTTCCACCTGCCATaGATGATACATTCTCACGTA +
Preference number: 4 (lower is better)
Translates to: GRSLNHDCLKISLYCPHQSFHLP*MIHSHV
Trigger: TACGTGAGAATGTATCATTCATGGCAGGTGGAAAGA...TTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTTTTCTAGGATTCCGCTaGGGCTGGTTTTATTTGAAC +
Preference number: 4 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSFLGFR*GWFYLN
Trigger: GTTCAAATAAAACCAGCCTCAGCGGAATCCTAGAAA...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTACTAACCAGTCTCTTTaGCAGATGAACAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSTNQSL*QMNKLL
Trigger: CAGGAGTTTGTTCATCTGGCAAAGAGACTGGTTAGT...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp CATCAAACTAGAAGTTTTTCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGCCAAAAGGGATTCGGTaGCCTTGCAAAAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: HQTRSFSFNVFRTHNHQVPKGIR*PCKSLP
Trigger: AGGCAGGCTTTTGCAAGGCCACCGAATCCCTTTTGG...CACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGAAAAACTTCTAGTTTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CCA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTGTTAAAAGCGGCGTTTaGTGTTGTTGCAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSVKSGV*CCCNSL
Trigger: CAAGGAATTGCAACAACACCAAACGCCGCTTTTAAC...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp CCCAGTCTGAGGCCTTCTCTCTTGATTAGCCAGAATTTTAGCATCAAACTAGAAAGTTCTCAGCCAAGATaGGGTTTGCAATCTCAGATC +
Preference number: 4 (lower is better)
Translates to: PSLRPSLLISQNFSIKLESSQPR*GLQSQI
Trigger: GATCTGAGATTGCAAACCTCATCTTGGCTGAGAACT...TTCTAGTTTGATGCTAAAATTCTGGCTAATCAAGAGAGAAGGCCTCAGACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR TCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATCAGGAAGAGTGGCTCTaGTTCCAAGAATTTACTTCA +
Preference number: 4 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNQEEWL*FQEFTS
Trigger: TGAAGTAAATTCTTGGAATCAGAGCCACTCTTCCTG...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413816.6
CDS-3UTR GCA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTAGTCTGAACCATGACTaGTTGAAAATAAGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: ITTKILRGLGSADTSVLLSLNHD*LKISLY
Trigger: ATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACT...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CAGGTAATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCGTCTGTTTTGCTTTTaGCTTTCAAACTGGCAACGA +
Preference number: 4 (lower is better)
Translates to: QVIKFSPKFPENQFPFPCRLFCF*LSNWQR
Trigger: TCGTTGCCAGTTTGAAAGGCAAAAGCAAAACAGACG...ACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGATTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp TTCACTACGATTTCCTTTTCTAATGCAGGATCACTAACCAGTCTCTTTGCCAGAGGCGTTTGGTGTTGTTaGAATTCCTTGACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: FTTISFSNAGSLTSLFARGVWCC*NSLTLD
Trigger: GTCCAGAGTCAAGGAATTGCAACAACACCAAACGCC...TCTGGCAAAGAGACTGGTTAGTGATCCTGCATTAGAAAAGGAAATCGTAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441390.6
CDS-3UTR CCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATGTTAAAAGCGGCGTTTaGTGTTGTTGCAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNVKSGV*CCCNSL
Trigger: CAAGGAATTGCAACAACACCAAACGCCGCTTTTAAC...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR TCA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTTTAATCTCAGAGCGTTaGAGAAAGGTATTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSLISER*RKVFQL
Trigger: TAACTGGAATACCTTTCTTCAACGCTCTGAGATTAA...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR GCA 90 bp CATCAAACTAGAAGTTTTTCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGGGCGTTTGGTGTTGTTaGAATTCCTTGACTCTGGAC +
Preference number: 4 (lower is better)
Translates to: HQTRSFSFNVFRTHNHQVGVWCC*NSLTLD
Trigger: GTCCAGAGTCAAGGAATTGCAACAACACCAAACGCC...CACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGAAAAACTTCTAGTTTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR GCA 90 bp CATCAAACTAGAAGTTTTTCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGAGCCAAGATGAGGTTTaGAATCTCAGATCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HQTRSFSFNVFRTHNHQVSQDEV*NLRSAF
Trigger: GAAAGCCGATCTGAGATTGCAAACCTCATCTTGGCT...CACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGAAAAACTTCTAGTTTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR GCA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATAGTCTGAACCATGACTaGTTGAAAATAAGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNSLNHD*LKISLY
Trigger: ATAGAGGCTTATTTTCAAGCAGTCATGGTTCAGACT...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CCA 90 bp CATCAAACTAGAAGTTTTTCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGGGCAATTTTCATAATTaGAAAGCTGGTATCAAGCAC +
Preference number: 4 (lower is better)
Translates to: HQTRSFSFNVFRTHNHQVGNFHN*KAGIKH
Trigger: GTGCTTGATACCAGCTTTCCAATTATGAAAATTGCC...CACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGAAAAACTTCTAGTTTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CAA 90 bp GCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGATGGGCCGTGACCGCGTaGCCGGTGTGTGGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: AGDPSDIHPRVPDVGRGRWAVTA*PVCGRS
Trigger: GCTGCGGCCACACACCGGCAACGCGGTCACGGCCCA...TCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp CATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAATGGGCCGTGACCGCGTaGCCGGTGTGTGGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: HYHDGAAGPGLTSLCGCKWAVTA*PVCGRS
Trigger: GCTGCGGCCACACACCGGCAACGCGGTCACGGCCCA...TTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp GATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGCCCTGCAGAACGATGGGGAGAGGTaGGTCAGAAGGCAGGCGGGA +
Preference number: 5 (lower is better)
Translates to: DGAAGPGLTSLCGCKALQNDGER*VRRQAG
Trigger: TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTT...CTGCAGGGCTTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGAACGATGGGGAGAGGTaGGTCAGAAGGCAGGCGGGA +
Preference number: 5 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSNDGER*VRRQAG
Trigger: TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTT...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp CTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAGCCCACCCTGGGTCACGCGGGCGATTaGCAGGCTATGCGTGACGTG +
Preference number: 5 (lower is better)
Translates to: LPTSIPGSLMWEGEEPTLGHAGD*QAMRDV
Trigger: CACGTCACGCATAGCCTGCAAATCGCCCGCGTGACC...CAGGGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp GGCGATTTGCAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTTGGGCCGTGACCGCGTaGCCGGTGTGTGGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: GDLQAMRDVALVPSWFSTWAVTA*PVCGRS
Trigger: GCTGCGGCCACACACCGGCAACGCGGTCACGGCCCA...AGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTGCAAATCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp CTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAGCCCACCCTGAGGGATTCGGTGGCCTaGCAAAAGCCTGCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: LPTSIPGSLMWEGEEPTLRDSVA*QKPASP
Trigger: AGGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCCT...CAGGGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGTGCGTGACGTGGCGCTaGTTCCTTCCTGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSCVTWR*FLPGFP
Trigger: TGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCA...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp CATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCTGTGTGGCTGCAAAGGTCACGCGGGCGATTaGCAGGCTATGCGTGACGTG +
Preference number: 5 (lower is better)
Translates to: HYHDGAAGPGLTSLCGCKGHAGD*QAMRDV
Trigger: CACGTCACGCATAGCCTGCAAATCGCCCGCGTGACC...TTTGCAGCCACACAGCGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp GCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAAGGGATTCGGTGGCCTaGCAAAAGCCTGCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: AGDPSDIHPRVPDVGRGRRDSVA*QKPASP
Trigger: AGGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCCT...TCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTAACGATGGGGAGAGGTaGGTCAGAAGGCAGGCGGGA +
Preference number: 5 (lower is better)
Translates to: WTQSLRPPSQGHAGDLQANDGER*VRRQAG
Trigger: TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTT...AGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp TCTAGATACTGTTGTTGCCTGCTCATGGCTCCCAGTCTGAGGCCTTCTCTCTTGTGGGCCGTGACCGCGTaGCCGGTGTGTGGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: SRYCCCLLMAPSLRPSLLWAVTA*PVCGRS
Trigger: GCTGCGGCCACACACCGGCAACGCGGTCACGGCCCA...CAAGAGAGAAGGCCTCAGACTGGGAGCCATGAGCAGGCAACAACAGTATCTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CAA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGCGCGTGCAGATCTTCTaGAGGCATCTCTCCAATCAA +
Preference number: 5 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSRVQIF*RHLSNQ
Trigger: TTGATTGGAGAGATGCCTCAAGAAGATCTGCACGCG...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp GCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCGGTCACGCGGGCGATTaGCAGGCTATGCGTGACGTG +
Preference number: 5 (lower is better)
Translates to: ALSSVQRSLGSPTCLSESGHAGD*QAMRDV
Trigger: CACGTCACGCATAGCCTGCAAATCGCCCGCGTGACC...GGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATAACGATGGGGAGAGGTaGGTCAGAAGGCAGGCGGGA +
Preference number: 5 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHNDGER*VRRQAG
Trigger: TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTT...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS GCA 90 bp TCAGATCGGCTTTCAAAGTCAAAGGCATCCTTCAAAACGCACACGTaGCCTGCAGCCTCTAGATGGGCCCGAACGCGCTGGGCCGTGACC +
Preference number: 5 (lower is better)
Translates to: SDRLSKSKASFKTHT*PAASRWARTRWAVT
Trigger: GGTCACGGCCCAGCGCGTTCGGGCCCATCTAGAGGCTGCAGGGCACGTGTGCGTTTTGAAGGATGCCTTTGACTTTGAAAGCCGATCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000539044.5
CDS-3UTR CAA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTTGGGCCGTGACCGCGTaGCCGGTGTGTGGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: ITTKILRGLGSADTSVLLWAVTA*PVCGRS
Trigger: GCTGCGGCCACACACCGGCAACGCGGTCACGGCCCA...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp CGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTAGGGATTCGGTGGCCTaGCAAAAGCCTGCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: RFLVFREASGHPRACQSPRDSVA*QKPASP
Trigger: AGGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCCT...AGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp ATGGGGCGAGGCCACCATTACCATGATGGCGCGGCTGGCCCCGGACTGACCTCGGCTGACACGTCTGTTTaGCTTTTGCCTTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: MGRGHHYHDGAAGPGLTSADTSV*LLPFKL
Trigger: CAGTTTGAAAGGCAAAAGCAAAACAGACGTGTCAGC...CGAGGTCAGTCCGGGGCCAGCCGCGCCATCATGGTAATGGTGGCCTCGCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp CCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCTGCGTGACGTGGCGCTaGTTCCTTCCTGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: PKLHPAKGWRLVTLPTSICVTWR*FLPGFP
Trigger: TGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCA...GATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAAAGGGATTCGGTGGCCTaGCAAAAGCCTGCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQRDSVA*QKPASP
Trigger: AGGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCCT...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp TTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGAAACGATGGGGAGAGGTaGGTCAGAAGGCAGGCGGGA +
Preference number: 5 (lower is better)
Translates to: FAFQTGNDGERLVRRQAGNDGER*VRRQAG
Trigger: TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTT...TCCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp CTGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCCTTTCAATTCCACCATaGAAAAGTGAGCTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: LDPKPQASISGSRGRFAGLSIPP*KSELCR
Trigger: CCGGCACAGCTCACTTTTCAATGGTGGAATTGAAAG...GCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp CTGGAGGCTGGTGACCCTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGAAGCGGCGTTTGGTGTaGTTGCAATTCCTTGACTCT +
Preference number: 5 (lower is better)
Translates to: LEAGDPSDIHPRVPDVGRKRRLV*LQFLDS
Trigger: AGAGTCAAGGAATTGCAACAACACCAAACGCCGCTT...CCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAGGGTCACCAGCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCTGCGTGACGTGGCGCTaGTTCCTTCCTGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LVFREASGHPRACQSPEICVTWR*FLPGFP
Trigger: TGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCA...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp CTTCCGACATCCATCCCCGGGTCCCTGATGTGGGAAGGGGAAGAGCCCACCCTGGAGAGGATCCTTAACTaGTCGAAGTCCACATATCAG +
Preference number: 5 (lower is better)
Translates to: LPTSIPGSLMWEGEEPTLERILN*SKSTYQ
Trigger: CTGATATGTGGACTTCGACAAGTTAAGGATCCTCTC...CAGGGTGGGCTCTTCCCCTTCCCACATCAGGGACCCGGGGATGGATGTCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp ACGGCAGCATTCCCGGGGATGTTCCTGGCCAATACCGGTACTTCTAAATCCATTAGGGATTCGGTGGCCTaGCAAAAGCCTGCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: TAAFPGMFLANTGTSKSIRDSVA*QKPASP
Trigger: AGGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCCT...AATGGATTTAGAAGTACCGGTATTGGCCAGGAACATCCCCGGGAATGCTGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
CDS-3UTR CAA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTGCTGACACGTCTGTTTaGCTTTTGCCTTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: WTQSLRPPSQGHAGDLQAADTSV*LLPFKL
Trigger: CAGTTTGAAAGGCAAAAGCAAAACAGACGTGTCAGC...AGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp ACCCAAGCTCCATCCTGCCAAAGGCTGGAGGCTGGTGACCCTTCCGACATCCATCGGCGTTTGGTGTTGTaGCAATTCCTTGACTCTGGA +
Preference number: 5 (lower is better)
Translates to: TQAPSCQRLEAGDPSDIHRRLVL*QFLDSG
Trigger: TCCAGAGTCAAGGAATTGCAACAACACCAAACGCCG...ATGGATGTCGGAAGGGTCACCAGCCTCCAGCCTTTGGCAGGATGGAGCTTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp GCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCCGGCGTTTGGTGTTGTaGCAATTCCTTGACTCTGGA +
Preference number: 5 (lower is better)
Translates to: ALSSVQRSLGSPTCLSESRRLVL*QFLDSG
Trigger: TCCAGAGTCAAGGAATTGCAACAACACCAAACGCCG...GGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS GCA 90 bp TCAGATCGGCTTTCAAAGTCAAAGGCATCCTTCAAAACGCACACGTaGCCTGCAGCCTCTAGATGGGCCAGTGTGTCGTCTGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: SDRLSKSKASFKTHT*PAASRWASVSSDRH
Trigger: GTGCCTGTCAGACGACACACTGGCCCATCTAGAGGCTGCAGGGCACGTGTGCGTTTTGAAGGATGCCTTTGACTTTGAAAGCCGATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537468.1
CDS-3UTR CAA 90 bp TCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGCACATTGGGCTCCTCCTGAGGGATTCGGTGGCCTaGCAAAAGCCTGCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: SFNVFRTHNHQVHIGLLLRDSVA*QKPASP
Trigger: AGGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCCT...CAGGAGGAGCCCAATGTGCACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CAA 90 bp GGCGTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCGCTGACACGTCTGTTTaGCTTTTGCCTTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: GVSSLTALSSVQRSLGSPADTSV*LLPFKL
Trigger: CAGTTTGAAAGGCAAAAGCAAAACAGACGTGTCAGC...GGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp TTTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGCGGCGTTTGGTGTTGTaGCAATTCCTGGGTCAAAGA +
Preference number: 5 (lower is better)
Translates to: FCLSNWQRWGEVGQKAGGRRLVL*QFLGQR
Trigger: TCTTTGACCCAGGAATTGCAACAACACCAAACGCCG...CCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413816.6
CDS-3UTR CAA 90 bp TGGACCCAAAGCCTCAGGCCTCCATCTCAGGGTCACGCGGGCGATTTGCAGGCTGTTAATCTCAGAGCGTaGAAGAAAGGTATTCCAGTT +
Preference number: 5 (lower is better)
Translates to: WTQSLRPPSQGHAGDLQAVNLRA*KKGIPV
Trigger: AACTGGAATACCTTTCTTCAACGCTCTGAGATTAAC...AGCCTGCAAATCGCCCGCGTGACCCTGAGATGGAGGCCTGAGGCTTTGGGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp GTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAAAGCGGCGTTTGGTGTaGTTGCAATTCCTTGACTCT +
Preference number: 5 (lower is better)
Translates to: VFREASGHPRACQSPEITKRRLV*LQFLDS
Trigger: AGAGTCAAGGAATTGCAACAACACCAAACGCCGCTT...TGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCGCTGACACGTCTGTTTaGCTTTTGCCTTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: LVFREASGHPRACQSPEIADTSV*LLPFKL
Trigger: CAGTTTGAAAGGCAAAAGCAAAACAGACGTGTCAGC...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp GTGAGCTCACTCACAGCGCTTTCTAGTGTTCAGAGAAGCCTCGGGTCACCCACGGCTGACACGTCTGTTTaGCTTTTGCCTTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: VSSLTALSSVQRSLGSPTADTSV*LLPFKL
Trigger: CAGTTTGAAAGGCAAAAGCAAAACAGACGTGTCAGC...CGTGGGTGACCCGAGGCTTCTCTGAACACTAGAAAGCGCTGTGAGTGAGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAACTTTCAATTCCACCATaGAAAAGTGAGCTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQLSIPP*KSELCR
Trigger: CCGGCACAGCTCACTTTTCAATGGTGGAATTGAAAG...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACAAGCGGCGTTTGGTGTaGTTGCAATTCCTGGGTCAA +
Preference number: 5 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHKRRLV*LQFLGQ
Trigger: TTGACCCAGGAATTGCAACAACACCAAACGCCGCTT...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413816.6
CDS-3UTR CAA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCCGGCGTTTGGTGTTGTaGCAATTCCTTGACTCTGGA +
Preference number: 5 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLRRLVL*QFLDSG
Trigger: TCCAGAGTCAAGGAATTGCAACAACACCAAACGCCG...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS TCA 90 bp TTTCCGCCTGGTTGGCATCTTCATTTACATCAGTTCCACCAAAGATaGCTCCAAAAGGGATTCGGTGGCCTTGCAAAAGCCTGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: FPPGWHLHLHQFHQR*LQKGFGGLAKACLP
Trigger: GGGGAGGCAGGCTTTTGCAAGGCCACCGAATCCCTTTTGGAGTCATCTTTGGTGGAACTGATGTAAATGAAGATGCCAACCAGGCGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
ENST00000539044.5
CDS-3UTR CAA 90 bp GCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCACGCGTGCAGATCTTCTaGAGGCATCTCTCCAATCAA +
Preference number: 5 (lower is better)
Translates to: AMRDVALVPSWFSTQIQPRVQIF*RHLSNQ
Trigger: TTGATTGGAGAGATGCCTCAAGAAGATCTGCACGCG...TGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCGCGTGCAGATCTTCTaGAGGCATCTCTCCAATCAA +
Preference number: 5 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQRVQIF*RHLSNQ
Trigger: TTGATTGGAGAGATGCCTCAAGAAGATCTGCACGCG...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACCTTTCAATTCCACCATaGAAAAGTGAGCTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHLSIPP*KSELCR
Trigger: CCGGCACAGCTCACTTTTCAATGGTGGAATTGAAAG...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS TCA 90 bp CTTACCCTTAGCATGCGGCCACTGCGCTTGTGCCATTTCCTTCATTaGCTCTGTGAAAGCGACAGCAAATCTGGCTTCCTCAAGAACTCT +
Preference number: 5 (lower is better)
Translates to: LTLSMRPLRLCHFLH*LCESDSKSGFLKNS
Trigger: AGAGTTCTTGAGGAAGCCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGGAAATGGCACAAGCGCAGTGGCCGCATGCTAAGGGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442111.6
CDS-3UTR CAA 90 bp CTGGTTTTATTTGAACTGCACTGGGCCCACGTGATCCAGAACTCTGTCTCTGAGCGCGTGCAGATCTTCTaGAGGCATCTCTCCAATCAA +
Preference number: 5 (lower is better)
Translates to: LVLFELHWAHVIQNSVSERVQIF*RHLSNQ
Trigger: TTGATTGGAGAGATGCCTCAAGAAGATCTGCACGCG...CTCAGAGACAGAGTTCTGGATCACGTGGGCCCAGTGCAGTTCAAATAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp TGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACAAGTACTTCTAAATCCATaGCCTCCAAAATTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: CSEKPRVTHVPVRVLRSQVLLNP*PPKLQL
Trigger: CAGCTGCAATTTTGGAGGCAATGGATTTAGAAGTAC...TTGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp CTAGTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCGTTAATCTCAGAGCGTaGAAGAAAGGTATTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LVFREASGHPRACQSPEIVNLRA*KKGIPV
Trigger: AACTGGAATACCTTTCTTCAACGCTCTGAGATTAAC...GATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp GTGTTCAGAGAAGCCTCGGGTCACCCACGTGCCTGTCAGAGTCCTGAGATCACACAAATTATCAGCACTTaGGTTAATCTCAGAGCGTTG +
Preference number: 5 (lower is better)
Translates to: VFREASGHPRACQSPEITQIIST*VNLRAL
Trigger: CAACGCTCTGAGATTAACCAAAGTGCTGATAATTTG...TGTGATCTCAGGACTCTGACAGGCACGTGGGTGACCCGAGGCTTCTCTGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACGAGAGGATCCTTAACTaGTCGAAGTCCACATATCAG +
Preference number: 5 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHERILN*SKSTYQ
Trigger: CTGATATGTGGACTTCGACAAGTTAAGGATCCTCTC...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp GACAGAGCTATTCACCACCGCGAAGCAATTCTTCACCACCGCGTGCAGATCTTCGAGAGGATCCTTAACTaGTCGAAGTCCACATATCAG +
Preference number: 5 (lower is better)
Translates to: DRAIHHREAILHHRVQIFERILN*SKSTYQ
Trigger: CTGATATGTGGACTTCGACAAGTTAAGGATCCTCTC...GAAGATCTGCACGCGGTGGTGAAGAATTGCTTCGCGGTGGTGAATAGCTCTGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
CDS TCA 90 bp TATAGAGATGAAGAGCCAGGGCAGCCTCGCAGTTCTCAGCCAAGATaGGGTTTGCAATCTCAGATCGGCTTTCAAAGTCAAAGGCATCCT +
Preference number: 5 (lower is better)
Translates to: YRDEEPGQPRSSQPR*GLQSQIGFQSQRHP
Trigger: AGGATGCCTTTGACTTTGAAAGCCGATCTGAGATTGCAAACCTCATCTTGGCTGAGAACTGCGAGGCTGCCCTGGCTCTTCATCTCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
ENST00000539044.5
CDS GCA 90 bp ATGAAGAGCCAGGGCAGCCTCGCAGTTCTCAGCCAAGATGAGGTTTaGAATCTCAGATCGGCTTTCAAAGTCAAAGGCATCCTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: MKSQGSLAVLSQDEV*NLRSAFKVKGILQN
Trigger: GTTTTGAAGGATGCCTTTGACTTTGAAAGCCGATCTGAGATTGCAAACCTCATCTTGGCTGAGAACTGCGAGGCTGCCCTGGCTCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
ENST00000539044.5
CDS-3UTR CAA 90 bp GGTCAGAAGGCAGGCGGGAGGAGTCTGAACCATGACTGCTTGAAAATAAGCCTCGTACTTCTAAATCCATaGCCTCCAAAATTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GQKAGGRSLNHDCLKISLVLLNP*PPKLQL
Trigger: CAGCTGCAATTTTGGAGGCAATGGATTTAGAAGTAC...GAGGCTTATTTTCAAGCAGTCATGGTTCAGACTCCTCCCGCCTGCCTTCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp TTTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGCTGAACCATGACTGCTaGAAAATAAGCCTCTATTGT +
Preference number: 5 (lower is better)
Translates to: FCLSNWQRWGEVGQKAGGLNHDC*KISLYC
Trigger: ACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAG...CCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGCTTTCAATTCCACCATaGAAAAGTGAGCTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLLSIPP*KSELCR
Trigger: CCGGCACAGCTCACTTTTCAATGGTGGAATTGAAAG...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp TTTTGCCTTTCAAACTGGCAACGATGGGGAGAGGTTGGTCAGAAGGCAGGCGGGCAAATTATCAGCACTTaGGTTAATCTCAGAGCGTTG +
Preference number: 5 (lower is better)
Translates to: FCLSNWQRWGEVGQKAGGQIIST*VNLRAL
Trigger: CAACGCTCTGAGATTAACCAAAGTGCTGATAATTTG...CCCGCCTGCCTTCTGACCAACCTCTCCCCATCGTTGCCAGTTTGAAAGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp TCTAGATACTGTTGTTGCCTGCTCATGGCTCCCAGTCTGAGGCCTTCTCTCTTGGAGAGGATCCTTAACTaGTCGAAGTCCACATATCAG +
Preference number: 5 (lower is better)
Translates to: SRYCCCLLMAPSLRPSLLERILN*SKSTYQ
Trigger: CTGATATGTGGACTTCGACAAGTTAAGGATCCTCTC...CAAGAGAGAAGGCCTCAGACTGGGAGCCATGAGCAGGCAACAACAGTATCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CAA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAAGCGGCGTTTGGTGTaGTTGCAATTCCTTGACTCT +
Preference number: 5 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLKRRLV*LQFLDS
Trigger: AGAGTCAAGGAATTGCAACAACACCAAACGCCGCTT...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS TCA 90 bp TGTAAACACTGGATCGACCCACTGCGCTTGTGCCATTTCCTTCATTaGCTCTGTGAAAGCGACAGCAAATCTGGCTTCCTCAAGAACTCT +
Preference number: 5 (lower is better)
Translates to: CKHWIDPLRLCHFLH*LCESDSKSGFLKNS
Trigger: AGAGTTCTTGAGGAAGCCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGGAAATGGCACAAGCGCAGTGGGTCGATCCAGTGTTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281703.11
CDS TCA 90 bp AGGGCAAGTTCAACATACCCACTGCGCTTGTGCCATTTCCTTCATTaGCTCTGTGAAAGCGACAGCAAATCTGGCTTCCTCAAGAACTCT +
Preference number: 5 (lower is better)
Translates to: RASSTYPLRLCHFLH*LCESDSKSGFLKNS
Trigger: AGAGTTCTTGAGGAAGCCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGGAAATGGCACAAGCGCAGTGGGTATGTTGAACTTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413816.6
CDS-3UTR CAA 90 bp GAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAGGGTACTTCTAAATCCATaGCCTCCAAAATTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ECSGSGDSRLTFSRIPLRVLLNP*PPKLQL
Trigger: CAGCTGCAATTTTGGAGGCAATGGATTTAGAAGTAC...CCTCAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp CCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCAACCCAGTCACCTGAACCATGACTGCTaGAAAATAAGCCTCTATTGT +
Preference number: 5 (lower is better)
Translates to: PKFPENQFPFPCPSQPSHLNHDC*KISLYC
Trigger: ACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAG...GTGACTGGGTTGACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp GATGAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGGAGAGGATCCTTAACTaGTCGAAGTCCACATATCAG +
Preference number: 5 (lower is better)
Translates to: DECSGSGDSRLTFSRIPLERILN*SKSTYQ
Trigger: CTGATATGTGGACTTCGACAAGTTAAGGATCCTCTC...CAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp GCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCCATGTTGTTGCAATTCCTaGACTCTGGACATAGACCTT +
Preference number: 5 (lower is better)
Translates to: AMRDVALVPSWFSTQIQPCCCNS*TLDIDL
Trigger: AAGGTCTATGTCCAGAGTCAAGGAATTGCAACAACA...TGGCTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp GAATGCAGTGGCTCTGGGGACTCACGACTAACATTTTCTAGGATTCCGCTGAGGTGTTGTTGCAATTCCTaGACTCTGGACATAGACCTT +
Preference number: 5 (lower is better)
Translates to: ECSGSGDSRLTFSRIPLRCCCNS*TLDIDL
Trigger: AAGGTCTATGTCCAGAGTCAAGGAATTGCAACAACA...CCTCAGCGGAATCCTAGAAAATGTTAGTCGTGAGTCCCCAGAGCCACTGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTCCAATGAGATCTGTCTaGCTTTCCACTGCGCTTGTG +
Preference number: 5 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSPMRSV*LSTALV
Trigger: CACAAGCGCAGTGGAAAGCAAGACAGATCTCATTGG...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537468.1
CDS-3UTR CAA 90 bp CAGGTAATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCGCGTGCAGATCTTCTaGAGGCATCTCTCCAATCAA +
Preference number: 5 (lower is better)
Translates to: QVIKFSPKFPENQFPFPCRVQIF*RHLSNQ
Trigger: TTGATTGGAGAGATGCCTCAAGAAGATCTGCACGCG...ACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGATTACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp CTGACATGCCTTCAGAGACAGAGCTATTCACCACCGCGAAGCAATTCTTCACCAGTACTTCTAAATCCATaGCCTCCAAAATTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LTCLQRQSYSPPRSNSSPVLLNP*PPKLQL
Trigger: CAGCTGCAATTTTGGAGGCAATGGATTTAGAAGTAC...TGGTGAAGAATTGCTTCGCGGTGGTGAATAGCTCTGTCTCTGAAGGCATGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413816.6
ENST00000441390.6
CDS-3UTR CAA 90 bp TCTAGATACTGTTGTTGCCTGCTCATGGCTCCCAGTCTGAGGCCTTCTCTCTTGGTTAATCTCAGAGCGTaGAAGAAAGGTATTCCAGTT +
Preference number: 5 (lower is better)
Translates to: SRYCCCLLMAPSLRPSLLVNLRA*KKGIPV
Trigger: AACTGGAATACCTTTCTTCAACGCTCTGAGATTAAC...CAAGAGAGAAGGCCTCAGACTGGGAGCCATGAGCAGGCAACAACAGTATCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CAA 90 bp CAGGCTATGCGTGACGTGGCGCTTGTTCCTTCCTGGTTTTCCACTCAAATTCAGCAAATTATCAGCACTTaGGTTAATCTCAGAGCGTTG +
Preference number: 5 (lower is better)
Translates to: QAMRDVALVPSWFSTQIQQIIST*VNLRAL
Trigger: CAACGCTCTGAGATTAACCAAAGTGCTGATAATTTG...CTGAATTTGAGTGGAAAACCAGGAAGGAACAAGCGCCACGTCACGCATAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
CDS-3UTR CAA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTGTACTTCTAAATCCATaGCCTCCAAAATTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ITTKILRGLGSADTSVLLVLLNP*PPKLQL
Trigger: CAGCTGCAATTTTGGAGGCAATGGATTTAGAAGTAC...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp ATCACAACAAAAATCCTGCGAGGACTCGGCTCAGCTGACACGTCTGTTTTGCTTCTGAACCATGACTGCTaGAAAATAAGCCTCTATTGT +
Preference number: 5 (lower is better)
Translates to: ITTKILRGLGSADTSVLLLNHDC*KISLYC
Trigger: ACAATAGAGGCTTATTTTCAAGCAGTCATGGTTCAG...AAGCAAAACAGACGTGTCAGCTGAGCCGAGTCCTCGCAGGATTTTTGTTGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp AGAAGTTTTTCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGCACATTGGGAAGCGGCGTTTGGTGTaGTTGCAATTCCTTGACTCT +
Preference number: 5 (lower is better)
Translates to: RSFSFNVFRTHNHQVHIGKRRLV*LQFLDS
Trigger: AGAGTCAAGGAATTGCAACAACACCAAACGCCGCTT...CCCAATGTGCACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGAAAAACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CAA 90 bp ATCAAATTCTCTCCCAAATTCCCTGAAAACCAGTTCCCCTTTCCCTGTCCCAGTGTTAATCTCAGAGCGTaGAAGAAAGGTATTCCAGTT +
Preference number: 5 (lower is better)
Translates to: IKFSPKFPENQFPFPCPSVNLRA*KKGIPV
Trigger: AACTGGAATACCTTTCTTCAACGCTCTGAGATTAAC...ACTGGGACAGGGAAAGGGGAACTGGTTTTCAGGGAATTTGGGAGAGAATTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp GACTGCTTGAAAATAAGCCTCTATTGTCCACACCAAAGCCCTAAGGCAGGTAATTGTTGTTGCAATTCCTaGACTCTGGACATAGACCTT +
Preference number: 5 (lower is better)
Translates to: DCLKISLYCPHQSPKAGNCCCNS*TLDIDL
Trigger: AAGGTCTATGTCCAGAGTCAAGGAATTGCAACAACA...ATTACCTGCCTTAGGGCTTTGGTGTGGACAATAGAGGCTTATTTTCAAGCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
CDS-3UTR CAA 90 bp CATCAAACTAGAAGTTTTTCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGCGGCGTTTGGTGTTGTaGCAATTCCTTGACTCTGGA +
Preference number: 5 (lower is better)
Translates to: HQTRSFSFNVFRTHNHQVRRLVL*QFLDSG
Trigger: TCCAGAGTCAAGGAATTGCAACAACACCAAACGCCG...CACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGAAAAACTTCTAGTTTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CAA 90 bp CCCAGTCTGAGGCCTTCTCTCTTGATTAGCCAGAATTTTAGCATCAAACTAGAATGTTGTTGCAATTCCTaGACTCTGGACATAGACCTT +
Preference number: 5 (lower is better)
Translates to: PSLRPSLLISQNFSIKLECCCNS*TLDIDL
Trigger: AAGGTCTATGTCCAGAGTCAAGGAATTGCAACAACA...TTCTAGTTTGATGCTAAAATTCTGGCTAATCAAGAGAGAAGGCCTCAGACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS-3UTR CAA 90 bp AGAAGTTTTTCTTTCAATGTTTTCAGGACCCACAATCACCAGGTGCACATTGGGCAAATTATCAGCACTTaGGTTAATCTCAGAGCGTTG +
Preference number: 5 (lower is better)
Translates to: RSFSFNVFRTHNHQVHIGQIIST*VNLRAL
Trigger: CAACGCTCTGAGATTAACCAAAGTGCTGATAATTTG...CCCAATGTGCACCTGGTGATTGTGGGTCCTGAAAACATTGAAAGAAAAACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539044.5
CDS CCA 72 bp CCGAACGCGCTGGGCCGTGACCGCGTTGCCGGTGTGTaGCCGCAGCACCGCCAGGAACAGGAGCCGCATGCC +
Preference number: 6 (lower is better)
Translates to: PNALGRDRVAGV*PQHRQEQEPHA
Trigger: GGCATGCGGCTCCTGTTCCTGGCGGTGCTGCGGCCACACACCGGCAACGCGGTCACGGCCCAGCGCGTTCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281703.11
ENST00000441390.6
ENST00000442111.6
CDS TCA 72 bp CTGCAGCCTCTAGATGGGCCCGAACGCGCTGGGCCGTaGCCGCGTTGCCGGTGTGTGGCCGCAGCACCGCCA +
Preference number: 6 (lower is better)
Translates to: LQPLDGPERAGP*PRCRCVAAAPP
Trigger: TGGCGGTGCTGCGGCCACACACCGGCAACGCGGTCACGGCCCAGCGCGTTCGGGCCCATCTAGAGGCTGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000441390.6
ENST00000442111.6
ENST00000539044.5
CDS CAA 90 bp CCTGCAGCCTCTAGATGGGCCCGAACGCGCTGGGCCGTGACCGCGTaGCCGGTGTGTGGCCGCAGCACCGCCAGGAACAGGAGCCGCATG +
Preference number: 6 (lower is better)
Translates to: PAASRWARTRWAVTA*PVCGRSTARNRSRM
Trigger: CATGCGGCTCCTGTTCCTGGCGGTGCTGCGGCCACACACCGGCAACGCGGTCACGGCCCAGCGCGTTCGGGCCCATCTAGAGGCTGCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281703.11
ENST00000441390.6
ENST00000442111.6
CDS CAA 72 bp TCTAGATGGGCCCGAACGCGCTGGGCCGTGACCGCGTaGCCGGTGTGTGGCCGCAGCACCGCCAGGAACAGG +
Preference number: 6 (lower is better)
Translates to: SRWARTRWAVTA*PVCGRSTARNR
Trigger: CCTGTTCCTGGCGGTGCTGCGGCCACACACCGGCAACGCGGTCACGGCCCAGCGCGTTCGGGCCCATCTAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281703.11
ENST00000441390.6
ENST00000442111.6
ENST00000539044.5
CDS GCA 72 bp CTTTCAAAGTCAAAGGCATCCTTCAAAACGCACACGTaGCCTGCAGCCTCTAGATGGGCCCGAACGCGCTGG +
Preference number: 6 (lower is better)
Translates to: LSKSKASFKTHT*PAASRWARTRW
Trigger: CCAGCGCGTTCGGGCCCATCTAGAGGCTGCAGGGCACGTGTGCGTTTTGAAGGATGCCTTTGACTTTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000539044.5
CDS TCA 72 bp AGCATGCGGCCACTGCGCTTGTGCCATTTCCTTCATTaGCTCTGTGAAAGCGACAGCAAATCTGGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: SMRPLRLCHFLH*LCESDSKSGFL
Trigger: GAGGAAGCCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGGAAATGGCACAAGCGCAGTGGCCGCATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442111.6
CDS GCA 72 bp CTTTCAAAGTCAAAGGCATCCTTCAAAACGCACACGTaGCCTGCAGCCTCTAGATGGGCCAGTGTGTCGTCT +
Preference number: 6 (lower is better)
Translates to: LSKSKASFKTHT*PAASRWASVSS
Trigger: AGACGACACACTGGCCCATCTAGAGGCTGCAGGGCACGTGTGCGTTTTGAAGGATGCCTTTGACTTTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537468.1
CDS TCA 72 bp GAAGAGCCAGGGCAGCCTCGCAGTTCTCAGCCAAGATaGGGTTTGCAATCTCAGATCGGCTTTCAAAGTCAA +
Preference number: 6 (lower is better)
Translates to: EEPGQPRSSQPR*GLQSQIGFQSQ
Trigger: TTGACTTTGAAAGCCGATCTGAGATTGCAAACCTCATCTTGGCTGAGAACTGCGAGGCTGCCCTGGCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
ENST00000539044.5
CDS TCA 72 bp TGGATCGACCCACTGCGCTTGTGCCATTTCCTTCATTaGCTCTGTGAAAGCGACAGCAAATCTGGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: WIDPLRLCHFLH*LCESDSKSGFL
Trigger: GAGGAAGCCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGGAAATGGCACAAGCGCAGTGGGTCGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281703.11
CDS GCA 72 bp CAGGGCAGCCTCGCAGTTCTCAGCCAAGATGAGGTTTaGAATCTCAGATCGGCTTTCAAAGTCAAAGGCATC +
Preference number: 6 (lower is better)
Translates to: QGSLAVLSQDEV*NLRSAFKVKGI
Trigger: GATGCCTTTGACTTTGAAAGCCGATCTGAGATTGCAAACCTCATCTTGGCTGAGAACTGCGAGGCTGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
ENST00000539044.5
CDS TCA 72 bp CCCACTGCGCTTGTGCCATTTCCTTCATTGACTCTGTaGAAGCGACAGCAAATCTGGCTTCCTCAAGAACTC +
Preference number: 6 (lower is better)
Translates to: PTALVPFPSLTL*KRQQIWLPQEL
Trigger: GAGTTCTTGAGGAAGCCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGGAAATGGCACAAGCGCAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281703.11
ENST00000413816.6
CDS TCA 72 bp GCCACTGCGCTTGTGCCATTTCCTTCATTGACTCTGTaGAAGCGACAGCAAATCTGGCTTCCTCAAGAACTC +
Preference number: 6 (lower is better)
Translates to: ATALVPFPSLTL*KRQQIWLPQEL
Trigger: GAGTTCTTGAGGAAGCCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGGAAATGGCACAAGCGCAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442111.6
CDS TCA 72 bp TCAACATACCCACTGCGCTTGTGCCATTTCCTTCATTaGCTCTGTGAAAGCGACAGCAAATCTGGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: STYPLRLCHFLH*LCESDSKSGFL
Trigger: GAGGAAGCCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGGAAATGGCACAAGCGCAGTGGGTATGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413816.6
CDS TCA 72 bp TCCACTGCGCTTGTGCCATTTCCTTCATTGACTCTGTaGAAGCGACAGCAAATCTGGCTTCCTCAAGAACTC +
Preference number: 6 (lower is better)
Translates to: STALVPFPSLTL*KRQQIWLPQEL
Trigger: GAGTTCTTGAGGAAGCCAGATTTGCTGTCGCTTTCACAGAGTCAATGAAGGAAATGGCACAAGCGCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537468.1
CDS TCA 72 bp GGTTGGCATCTTCATTTACATCAGTTCCACCAAAGATaGCTCCAAAAGGGATTCGGTGGCCTTGCAAAAGCC +
Preference number: 6 (lower is better)
Translates to: GWHLHLHQFHQR*LQKGFGGLAKA
Trigger: GGCTTTTGCAAGGCCACCGAATCCCTTTTGGAGTCATCTTTGGTGGAACTGATGTAAATGAAGATGCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281703.11
ENST00000413816.6
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
ENST00000539044.5
CDS CCA 72 bp GCGTTGAAGAAAGGTATTCCAGTTAAAAGCGGCGTTTaGTGTTGTTGCAATTCCTTGACTCTGGACATAGAC +
Preference number: 6 (lower is better)
Translates to: ALKKGIPVKSGV*CCCNSLTLDID
Trigger: GTCTATGTCCAGAGTCAAGGAATTGCAACAACACCAAACGCCGCTTTTAACTGGAATACCTTTCTTCAACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441390.6
ENST00000442111.6
ENST00000537468.1
ENST00000539044.5