RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000135423

Ensembl transcript IDs: ENST00000311966.9, ENST00000390288.6, ENST00000424141.6, ENST00000461077.1, ENST00000471282.5, ENST00000479952.5, ENST00000483347.1, ENST00000486433.5, ENST00000486896.5, ENST00000491880.1, ENST00000494345.5, ENST00000494474.5, ENST00000496006.5, ENST00000539272.5, ENST00000610413.4, ENST00000623608.3

Found 1071 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCACCACTACTGGACTCTTGGACCACGCGGTGCATCTCGCTCATaGAGTCTCGGAGCCGAGGATCTGATGTCTGCAGTCCAGTGGCCT +
Preference number: 1 (lower is better)
Translates to: GHHYWTLGPRGASRS*SLGAEDLMSAVQWP
Trigger: AGGCCACTGGACTGCAGACATCAGATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR GCA 90 bp TCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTaGATCTCGCTCATGCAGTCTCGGAGCCGAGGATCTGATGTCTGC +
Preference number: 1 (lower is better)
Translates to: SRSKRPPLLDSWTTR*ISLMQSRSRGSDVC
Trigger: GCAGACATCAGATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR CCA 90 bp TTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTaGACCACGCGGTGCATCTCGCTCATGCAGTCTCGGAGCCGAGGA +
Preference number: 1 (lower is better)
Translates to: FRKRSRSKRPPLLDS*TTRCISLMQSRSRG
Trigger: TCCTCGGCTCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR TCA 90 bp GGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATGACACTGCCTaGTTCACAAGTGACCTCCACAGAACACAGCTGGAAGTAGAGATC +
Preference number: 1 (lower is better)
Translates to: GADPTVGEGGCHDTA*FTSDLHRTQLEVEI
Trigger: GATCTCTACTTCCAGCTGTGTTCTGTGGAGGTCACTTGTGAATCAGGCAGTGTCATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR CCA 90 bp TCACACACTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTaGACTCTTGGACCACGCGGTGCATCTCGCTCATGCAGTCTCGGA +
Preference number: 1 (lower is better)
Translates to: SHTFGRDLGPRGHHY*TLGPRGASRSCSLG
Trigger: TCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAGTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR CCA 90 bp GGAGAGGAAGAGGAGACCTGGGTGAAGAGCTGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTGGA +
Preference number: 1 (lower is better)
Translates to: GEEEETWVKSWDGFE*GKPLGCTLKPSLSG
Trigger: TCCAGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGTCTCCTCTTCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR TCA 90 bp TGTTCCCCAGCTTGTCCAATGGGGGTGACAGGCACATCATTCCCATaGCATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACT +
Preference number: 1 (lower is better)
Translates to: CSPACPMGVTGTSFP*HWVPPGGWLLIQLT
Trigger: AGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATTGGACAAGCTGGGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR CCA 90 bp AGGTGTCCTCTGAGGCCCTTCTCTGTACTCTGTCTGCTGAGGGAATaGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAA +
Preference number: 1 (lower is better)
Translates to: RCPLRPFSVLCLLRE*GILTPIESTSLSHQ
Trigger: TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAGAAGGGCCTCAGAGGACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR CCA 90 bp TTGCCTCCAGTGAGCTCTTTGACATCCTCAAAGATGCGATCCACATaGCCCGTGAACTCCTCAAAATCAGGAATGACAAACTTCTTTCGG +
Preference number: 1 (lower is better)
Translates to: LPPVSSLTSSKMRST*PVNSSKSGMTNFFR
Trigger: CCGAAAGAAGTTTGTCATTCCTGATTTTGAGGAGTTCACGGGCCATGTGGATCGCATCTTTGAGGATGTCAAAGAGCTCACTGGAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR GCA 90 bp GTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGAT +
Preference number: 1 (lower is better)
Translates to: VYSHSHFPYSVDMYM*MVARVPPPEYLSHD
Trigger: ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR CCA 90 bp TCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATA +
Preference number: 1 (lower is better)
Translates to: SLSIKLAVSSSSSMS*PRGVDFSRLLKPCI
Trigger: TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR CAA 90 bp CTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTaGGACCACGCGGTGCATCTCGCTCATGCAGTCTCGGAGCCGAGG +
Preference number: 2 (lower is better)
Translates to: LSEEISVQEATTTGL*DHAVHLAHAVSEPR
Trigger: CCTCGGCTCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR-3UTR TCA 90 bp GACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCAGCACACTCTCGCCTGTaGTGGGGCAGATCCCACCGT +
Preference number: 2 (lower is better)
Translates to: DHLQMVELHSIIQGNVAPAHSRL*WGRSHR
Trigger: ACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGC...TGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp AGGCTTCTAGTATGGGCTGGTGCACCTGGTAGTGGGGTTAGAGAGCCACTGGGGCAATGGCACCAGCATTaGCCATGGGGTTATGGGGGA +
Preference number: 2 (lower is better)
Translates to: RLLVWAGAPGSGVREPLGQWHQH*PWGYGG
Trigger: TCCCCCATAACCCCATGGTCAATGCTGGTGCCATTG...CCCCAGTGGCTCTCTAACCCCACTACCAGGTGCACCAGCCCATACTAGAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000486896.5
3UTR-3UTR GCA 90 bp TGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTGGCCACTTGGCTCTTTaGCCACAAACTTGTGCACGT +
Preference number: 2 (lower is better)
Translates to: CMRLRVLRTASALSTLSPGHLAL*PQTCAR
Trigger: ACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCC...AGGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR GCA 90 bp CCTCCAGTGAGCTCTTTGACATCCTCAAAGATGCGATCCACATGGCCCGTGAACGGTGCATCTCGCTCATaGAGTCTCGGAGCCGAGGAT +
Preference number: 2 (lower is better)
Translates to: PPVSSLTSSKMRSTWPVNGASRS*SLGAED
Trigger: ATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACC...GTTCACGGGCCATGTGGATCGCATCTTTGAGGATGTCAAAGAGCTCACTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR-3UTR TCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAGCACACTCTCGCCTGTaGTGGGGCAGATCCCACCGT +
Preference number: 2 (lower is better)
Translates to: LCLLREWGILTPIESTSLAHSRL*WGRSHR
Trigger: ACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGC...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp GTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGTGTGGCCAGCTCATaGTTTTTCTTGAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: VLFRISAPSRRGSNFRAQCVASS*FFLSRG
Trigger: GCCCCTGCTCAAGAAAAAGCATGAGCTGGCCACACA...CTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp CCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCAATGTGTGCACGTAGTCAGTaGCTAGGGTGCTTATGGAGA +
Preference number: 2 (lower is better)
Translates to: PTSGRSWSPYGCSPACPMCARSQ*LGCLWR
Trigger: TCTCCATAAGCACCCTAGGCACTGACTACGTGCACA...CATTGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR CCA 90 bp GAATGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGTGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: ECMRLRVLRTASALSTLSWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...CGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp TGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACCTGTCCTTGGCAAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTC +
Preference number: 2 (lower is better)
Translates to: WLNCTASSRGMLPHLSLASSSMS*PRGVDF
Trigger: GAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCT...TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp TTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCGTAGCGCAGGCCACTTaGCTCTTTGCCCACAAACTT +
Preference number: 2 (lower is better)
Translates to: LFRISAPSRRGSNFRAQCVAQAT*LFAHKL
Trigger: AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTAC...GCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR CCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGCTGGCAGGCCCACGTaGAAGGCAAACTGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVAGRPT*KANWPE
Trigger: CTCTGGCCAGTTTGCCTTCCACGTGGGCCTGCCAGC...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp TGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACCTGTCCTTGGCAGTACCACCAGGAGGATaGCTCCTGATACAGCTGACT +
Preference number: 2 (lower is better)
Translates to: WLNCTASSRGMLPHLSLAVPPGG*LLIQLT
Trigger: AGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTAC...TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp CGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGGGAATGTGGCATTGCTaGAACCCATGTATTCATTCC +
Preference number: 2 (lower is better)
Translates to: RISAPSRRGSNFRAQCLRGMWHC*NPCIHS
Trigger: GGAATGAATACATGGGTTTCAGCAATGCCACATTCC...CCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR TCA 90 bp ACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCAATTGCCTGATTCACAAGTaGCCTCCACAGAACACAGCT +
Preference number: 2 (lower is better)
Translates to: TNFWQKLVPLWLFPSLSNCLIHK*PPQNTA
Trigger: AGCTGTGTTCTGTGGAGGTCACTTGTGAATCAGGCA...ATTGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp CATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACTTGGCTGGCAGGCTGTCTGCTGAGGGAATaGGGTATTTTGACTCCCATA +
Preference number: 2 (lower is better)
Translates to: HWVPPGGWLLIQLTWLAGCLLRE*GILTPI
Trigger: TATGGGAGTCAAAATACCCCATTCCCTCAGCAGACA...GCCTGCCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp TGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTTGTCTGCTGAGGGAATaGGGTATTTTGACTCCCATA +
Preference number: 2 (lower is better)
Translates to: CMRLRVLRTASALSTLSPCLLRE*GILTPI
Trigger: TATGGGAGTCAAAATACCCCATTCCCTCAGCAGACA...AGGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCGAAGCCCAGTCTCTCTaGATAGCTGTACTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSEAQSL*IAVLQV
Trigger: CACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTC...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp GACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCATGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: DHLQMVELHSIIQGNVAPWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...TGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp AGAACACAGCTGGAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGGTAGCGCAGGCCACTTaGCTCTTTGCCCACAAACTT +
Preference number: 2 (lower is better)
Translates to: RTQLEVEIKGSHHVHPLRVAQAT*LFAHKL
Trigger: AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTAC...CCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTCCAGCTGTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486896.5
3UTR-3UTR CCA 90 bp CTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAAAGCTGGTCCCCCTATaGCTGTTCCCCAGCTTGTCC +
Preference number: 2 (lower is better)
Translates to: LSIKLAVSSSSSMSWPRGKLVPL*LFPSLS
Trigger: GGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTT...TCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp CAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTAAGCTGGTCCCCCTATaGCTGTTCCCCAGCTTGTCC +
Preference number: 2 (lower is better)
Translates to: QFDHLQMVELHSIIQGNVKLVPL*LFPSLS
Trigger: GGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTT...AACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp CAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTCTGCTTGGTCCCCACTaGAGCAGTGTAGCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: QFDHLQMVELHSIIQGNVLLGPH*SSVALH
Trigger: ATGGAGAGCTACACTGCTTCAGTGGGGACCAAGCAG...AACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp ACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGCTGCTTGGTCCCCACTaGAGCAGTGTAGCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: TPIESTSLSHQMTAWSPLLLGPH*SSVALH
Trigger: ATGGAGAGCTACACTGCTTCAGTGGGGACCAAGCAG...CAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp AGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGGAGCTGGGATGGTTTTaGGTGGGGCAAGCCATTAGG +
Preference number: 2 (lower is better)
Translates to: SLTTSRWLNCTASSRGMLELGWF*VGQAIR
Trigger: CCTAATGGCTTGCCCCACTCAAAACCATCCCAGCTC...CAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp CGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGAGCACTTCTTTTCCTTaGGATAATAGCCGATGGCAT +
Preference number: 2 (lower is better)
Translates to: RISAPSRRGSNFRAQCLRSTSFP*DNSRWH
Trigger: ATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGCT...CCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486433.5
3UTR-3UTR GCA 90 bp TTGAAGAGAGACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAAGTCACCAAATGACTaGTTGGTCCCCACTGAAGCA +
Preference number: 2 (lower is better)
Translates to: LKRDTNFWQKLVPLWLFPKSPND*LVPTEA
Trigger: TGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTT...GGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGTCTCTCTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp CAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTCTTGTTCCGAATTTCTaGCCCTTCACGCCGTGGGTC +
Preference number: 2 (lower is better)
Translates to: QFDHLQMVELHSIIQGNVLVPNF*PFTPWV
Trigger: GACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAG...AACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp AGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGACCTGGGTGAAGAGCTaGGATGGTTTTGAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: SLTTSRWLNCTASSRGMLTWVKS*DGFEWG
Trigger: GCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGT...CAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTC +
Preference number: 2 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSSSSMS*PRGVDF
Trigger: GAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCT...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGAACTTCTGGCAGAAGCTaGTCCCCCTATGGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRTSGRS*SPYGCS
Trigger: GGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGT...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR CAA 90 bp TTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATaGACCATGGGGTTATGGGGGATTCCTTCCTCATTGAGGGAGAGC +
Preference number: 2 (lower is better)
Translates to: LQSILIRELTTMAPA*TMGLWGIPSSLRES
Trigger: GCTCTCCCTCAATGAGGAAGGAATCCCCCATAACCCCATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
3UTR-3UTR TCA 90 bp CAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGAC +
Preference number: 2 (lower is better)
Translates to: QFDHLQMVELHSIIQGNVAHAFS*AGAVHD
Trigger: GTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGC...AACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGAC +
Preference number: 2 (lower is better)
Translates to: VARVPPPEYLSHDGFFREAHAFS*AGAVHD
Trigger: GTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGC...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp GTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCCTGCTTGGTCCCCACTaGAGCAGTGTAGCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: VLAKGSRFLQTTKAMYIALLGPH*SSVALH
Trigger: ATGGAGAGCTACACTGCTTCAGTGGGGACCAAGCAG...GGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTACTGCTTGGTCCCCACTaGAGCAGTGTAGCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: LCLLREWGILTPIESTSLLLGPH*SSVALH
Trigger: ATGGAGAGCTACACTGCTTCAGTGGGGACCAAGCAG...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp CTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACCTGCTTGGTCCCCACTaGAGCAGTGTAGCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: LCTLSAEGMGYFDSHRKHLLGPH*SSVALH
Trigger: ATGGAGAGCTACACTGCTTCAGTGGGGACCAAGCAG...GTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCTGCTTGGTCCCCACTaGAGCAGTGTAGCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: LLREWGILTPIESTSLSHLLGPH*SSVALH
Trigger: ATGGAGAGCTACACTGCTTCAGTGGGGACCAAGCAG...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAGAGCTGGGATGGTTTTaGGTGGGGCAAGCCATTAGG +
Preference number: 2 (lower is better)
Translates to: LCLLREWGILTPIESTSLELGWF*VGQAIR
Trigger: CCTAATGGCTTGCCCCACTCAAAACCATCCCAGCTC...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp CTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACGGCACATCATTCCCATaGCATTGGGTACCACCAGGA +
Preference number: 2 (lower is better)
Translates to: LHQSISLMMVSSGRGRGDGTSFP*HWVPPG
Trigger: TCCTGGTGGTACCCAATGTCATGGGAATGATGTGCC...GTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp TCAAAATCAGGAATGACAAACTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTCGGAGCCGAGGATCTaGTGTCTGCAGTCCAGTGGC +
Preference number: 2 (lower is better)
Translates to: SKSGMTNFFRNAWVRSTMSEPRI*CLQSSG
Trigger: GCCACTGGACTGCAGACATCAGATCCTCGGCTCCGA...CATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTTTGTCATTCCTGATTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR-3UTR GCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGTGTGTGGCCAGCTCATaGTTTTTCTTGAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: VARVPPPEYLSHDGFFRECVASS*FFLSRG
Trigger: GCCCCTGCTCAAGAAAAAGCATGAGCTGGCCACACA...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR GCA 90 bp CAGCTGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATTGTGTGGCCAGCTCATaGTTTTTCTTGAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: QLQQHAELCASHSLSVPYCVASS*FFLSRG
Trigger: GCCCCTGCTCAAGAAAAAGCATGAGCTGGCCACACA...ATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp ATTGAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTAGTCAGTGCCTAGGGTaGTTATGGAGATGGCATAGG +
Preference number: 2 (lower is better)
Translates to: IEGELVVAQATWLFAHKLSQCLG*LWRWHR
Trigger: CCTATGCCATCTCCATAAGCACCCTAGGCACTGACT...AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
3UTR-3UTR GCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGTACATGCCGCAGGAATaGATGAGGCTGAGGGTGTTG +
Preference number: 2 (lower is better)
Translates to: VARVPPPEYLSHDGFFREYMPQE*MRLRVL
Trigger: CAACACCCTCAGCCTCATGCATTCCTGCGGCATGTA...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTTCAGCTGCAGCAACATaGAGAGCTGTGCGCGAGTCA +
Preference number: 2 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSSAAAT*RAVRES
Trigger: TGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTGA...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp CAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGAAGCCCAGTCTCTCTaGATAGCTGTACTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: QFDHLQMVELHSIIQGNVEAQSL*IAVLQV
Trigger: CACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTC...AACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp ACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGGAAGCCCAGTCTCTCTaGATAGCTGTACTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: TPIESTSLSHQMTAWSPLEAQSL*IAVLQV
Trigger: CACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTC...CAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAACCTGGGTGAAGAGCTaGGATGGTTTTGAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVTWVKS*DGFEWG
Trigger: GCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGT...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTACCTGGGTGAAGAGCTaGGATGGTTTTGAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSTWVKS*DGFEWG
Trigger: GCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGT...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp CTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTC +
Preference number: 2 (lower is better)
Translates to: LHQSISLMMVSSGRGRGDSSSMS*PRGVDF
Trigger: GAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCT...GTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTTCGAAGAGCTGAGACTGATACAGCTGACTTaGCTGGCAGGCCCACGTGGA +
Preference number: 2 (lower is better)
Translates to: SLSVPYPWLTRQTFEELRLIQLT*LAGPRG
Trigger: TCCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAG...TCTCAGCTCTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAACAGAAAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR CAA 90 bp TGCCTCAGCCTGAGTTTCAGAGAGTGTGTAGGAGTCCTGGTAATCTaGAAGCAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATC +
Preference number: 2 (lower is better)
Translates to: CLSLSFRECVGVLVI*KQFDHLQMVELHSI
Trigger: GATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTGCTTCAAGATTACCAGGACTCCTACACACTCTCTGAAACTCAGGCTGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGAC +
Preference number: 2 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSAHAFS*AGAVHD
Trigger: GTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGC...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGCTGGGATGGTTTTaGGTGGGGCAAGCCATTAGG +
Preference number: 2 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPELGWF*VGQAIR
Trigger: CCTAATGGCTTGCCCCACTCAAAACCATCCCAGCTC...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp CAGCTGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATTGCCTGATTCACAAGTaGCCTCCACAGAACACAGCT +
Preference number: 2 (lower is better)
Translates to: QLQQHAELCASHSLSVPYCLIHK*PPQNTA
Trigger: AGCTGTGTTCTGTGGAGGTCACTTGTGAATCAGGCA...ATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp GCAAGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACTGTGTGGCCAGCTCATaGTTTTTCTTGAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: ASLDQEFNNFDVSFSCSNCVASS*FFLSRG
Trigger: GCCCCTGCTCAAGAAAAAGCATGAGCTGGCCACACA...GTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp GATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATCTTGTTCCGAATTTCTaGCCCTTCACGCCGTGGGTC +
Preference number: 2 (lower is better)
Translates to: DMYMCMVARVPPPEYLSHLVPNF*PFTPWV
Trigger: GACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAG...ATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAATCAGCTGCAGCAACATaGAGAGCTGTGCGCGAGTCA +
Preference number: 2 (lower is better)
Translates to: LREWGILTPIESTSLSHQSAAAT*RAVRES
Trigger: TGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTGA...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp GAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGTTATTTTTGGTGGTTATaGATTACATGTGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: EFLPLHAVGLTSEHSASGYFWWL*ITCVAS
Trigger: GCTGGCCACACATGTAATCCATAACCACCAAAAATA...ACCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTCTGATACAGCTGACTTaGCTGGCAGGCCCACGTGGA +
Preference number: 2 (lower is better)
Translates to: WGILTPIESTSLSHQMTALIQLT*LAGPRG
Trigger: TCCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAG...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGTACCACCAGGAGGATaGCTCCTGATACAGCTGACT +
Preference number: 2 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVVPPGG*LLIQLT
Trigger: AGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTAC...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTTCGAAGAGCTGAGAACTTCTGGCAGAAGCTaGTCCCCCTATGGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: SLSVPYPWLTRQTFEELRTSGRS*SPYGCS
Trigger: GGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGT...TCTCAGCTCTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAACAGAAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR CAA 90 bp CTGAGGCCCTTCTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCT +
Preference number: 2 (lower is better)
Translates to: LRPFSVLCLLREWGI*TPIESTSLSHQMTA
Trigger: AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAGAAGGGCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATGAGCTGGGATGGTTTTaGGTGGGGCAAGCCATTAGG +
Preference number: 2 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYELGWF*VGQAIR
Trigger: CCTAATGGCTTGCCCCACTCAAAACCATCCCAGCTC...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAGAGTATCTCTCTCATaGTGGTTTCTTCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLRVSLS*WFLQGE
Trigger: CTCTCCCTGAAGAAACCATCATGAGAGAGATACTCT...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCAGGCACATCATTCCCATaGCATTGGGTACCACCAGGA +
Preference number: 2 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPGTSFP*HWVPPG
Trigger: TCCTGGTGGTACCCAATGTCATGGGAATGATGTGCC...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCACCTCCAGATGGTTaGACTGCACAGCATCATCCA +
Preference number: 2 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPPPPDG*TAQHHP
Trigger: TGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGG...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR GCA 90 bp TTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACGGCCACTTGGCTCTTTaGCCACAAACTTGTGCACGT +
Preference number: 2 (lower is better)
Translates to: FVTVHLDQGADNNGTSIDGHLAL*PQTCAR
Trigger: ACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCC...GTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
3UTR-3UTR GCA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTCTTGTTCCGAATTTCTaGCCCTTCACGCCGTGGGTC +
Preference number: 2 (lower is better)
Translates to: WGILTPIESTSLSHQMTALVPNF*PFTPWV
Trigger: GACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAG...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp CTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGACAACATGCAGAGCTGTaGGCGAGTCATAGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: LSIKLAVSSSSSMSWPRGQHAEL*ASHSLS
Trigger: AGAAAGACTATGACTCGCGCACAGCTCTGCATGTTG...TCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAGATGTGTCCTTCAGCTaGAGCAACATGCAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: LCLLREWGILTPIESTSLDVSFS*SNMQSC
Trigger: ACAGCTCTGCATGTTGCTGCAGCTGAAGGACACATC...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTACACCAAATGACTGCTTaGTCCCCACTGAAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVHQMTA*SPLKQC
Trigger: ACACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTG...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCACCAAATGACTGCTTaGTCCCCACTGAAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSHQMTA*SPLKQC
Trigger: ACACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTG...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAGAAGCCCAGTCTCTCTaGATAGCTGTACTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: LREWGILTPIESTSLSHQEAQSL*IAVLQV
Trigger: CACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTC...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTTCGAAGAGCTGAGAGAAGCCCAGTCTCTCTaGATAGCTGTACTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: SLSVPYPWLTRQTFEELREAQSL*IAVLQV
Trigger: CACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTC...TCTCAGCTCTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAACAGAAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp GATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGAAGCCCAGTCTCTCTaGATAGCTGTACTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: DMYMCMVARVPPPEYLSHEAQSL*IAVLQV
Trigger: CACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTC...ATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTATGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTACCTGGGTGAAGAGCTaGGATGGTTTTGAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: WGILTPIESTSLSHQMTATWVKS*DGFEWG
Trigger: GCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGT...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp GATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGTACCACCAGGAGGATaGCTCCTGATACAGCTGACT +
Preference number: 2 (lower is better)
Translates to: DMYMCMVARVPPPEYLSHVPPGG*LLIQLT
Trigger: AGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTAC...ATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGACTTCTGGCAGAAGCTaGTCCCCCTATGGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWTSGRS*SPYGCS
Trigger: GGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGT...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp GAAATAAGGCTTCTAGTATGGGCTGGTGCACCTGGTAGTGGGGTTAGAGAGCCAGTTTCCTTCTCTGACTaGAATCTGAAGCAAACACCC +
Preference number: 2 (lower is better)
Translates to: EIRLLVWAGAPGSGVREPVSFSD*NLKQTP
Trigger: GGGTGTTTGCTTCAGATTCCAGTCAGAGAAGGAAAC...TGGCTCTCTAACCCCACTACCAGGTGCACCAGCCCATACTAGAAGCCTTATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
3UTR-3UTR CCA 90 bp GAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTATAAGGCTTCTAGTATaGGCTGGTGCACCTGGTAGT +
Preference number: 2 (lower is better)
Translates to: EVEIKGSHHVHPLRKALLIRLLV*AGAPGS
Trigger: ACTACCAGGTGCACCAGCCCATACTAGAAGCCTTAT...AAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486896.5
3UTR-3UTR TCA 90 bp AGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGAGAGTATCTCTCTCATaGTGGTTTCTTCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: SLTTSRWLNCTASSRGMLRVSLS*WFLQGE
Trigger: CTCTCCCTGAAGAAACCATCATGAGAGAGATACTCT...CAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATACCCTGTTTCCTTCTCTaGCTGGAATGTGGCATTGCT +
Preference number: 2 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIPCFLL*LECGIA
Trigger: AGCAATGCCACATTCCAGTCAGAGAAGGAAACAGGG...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR TCA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTCTTGTCCAATGGGGGTaGCAGGCACATCATTCCCAT +
Preference number: 2 (lower is better)
Translates to: WGILTPIESTSLSHQMTALVQWG*QAHHSH
Trigger: ATGGGAATGATGTGCCTGTCACCCCCATTGGACAAG...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp CTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGACAGCAAATAACAGGTTaGCCACAGTCTTGTTCCGAA +
Preference number: 2 (lower is better)
Translates to: LESLHQSISLMMVSSGRGQQITG*PQSCSE
Trigger: TTCGGAACAAGACTGTGGTCAACCTGTTATTTGCTG...TCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCATGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTC +
Preference number: 2 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWSSSMS*PRGVDF
Trigger: GAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCT...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp TGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATTTGACCATGGGGTTATaGGGGATTCCTTCCTCATTG +
Preference number: 2 (lower is better)
Translates to: CSNMQSCARVIVFLFHIHLTMGL*GIPSSL
Trigger: CAATGAGGAAGGAATCCCCCATAACCCCATGGTCAA...ATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR CCA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGGTACCACCAGGAGGATaGCTCCTGATACAGCTGACT +
Preference number: 2 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWVPPGG*LLIQLT
Trigger: AGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTAC...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTTTGACCACCTCCAGATaGTTGAACTGCACAGCATCA +
Preference number: 2 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSLTTSR*LNCTAS
Trigger: TGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAA...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp TTGACCACAGTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCTCCCAGCCATTTTGTTaGGATACTGCAACACAAAAT +
Preference number: 2 (lower is better)
Translates to: LTTVLFRISAPSRRGSNFSQPFC*DTATQN
Trigger: ATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGA...GAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGTGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR GCA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTTGTGTGGCCAGCTCATaGTTTTTCTTGAGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVACVASS*FFLSRG
Trigger: GCCCCTGCTCAAGAAAAAGCATGAGCTGGCCACACA...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR GCA 90 bp GTGCCTCAGGTTGTCATAGTTGTGGAAATTGAAGAGAGACACCAACTTCTGGCAAAGTCACCAAATGACTaGTTGGTCCCCACTGAAGCA +
Preference number: 2 (lower is better)
Translates to: VPQVVIVVEIEERHQLLAKSPND*LVPTEA
Trigger: TGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTT...TGCCAGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATGACAACCTGAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp ACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGGAAGAGTGTGCACGTAGTCAGTaGCTAGGGTGCTTATGGAGA +
Preference number: 2 (lower is better)
Translates to: THVFIPSHFVEILQHLEECARSQ*LGCLWR
Trigger: TCTCCATAAGCACCCTAGGCACTGACTACGTGCACA...CTCTTCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
3UTR-3UTR GCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATAGAGGGTGTTGCGCACTaGTTCAGCACTCAGCACACT +
Preference number: 2 (lower is better)
Translates to: QTTKAMYIAIPTSHILWIEGVAH*FSTQHT
Trigger: AGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTC...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATGATGTGTCCTTCAGCTaGAGCAACATGCAGAGCTGT +
Preference number: 2 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYDVSFS*SNMQSC
Trigger: ACAGCTCTGCATGTTGCTGCAGCTGAAGGACACATC...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTTATTTTTGGTGGTTATaGATTACATGTGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSYFWWL*ITCVAS
Trigger: GCTGGCCACACATGTAATCCATAACCACCAAAAATA...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTATGTCTGCTGAGGGAATaGGGTATTTTGACTCCCATA +
Preference number: 2 (lower is better)
Translates to: LCLLREWGILTPIESTSLCLLRE*GILTPI
Trigger: TATGGGAGTCAAAATACCCCATTCCCTCAGCAGACA...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTGAAGCCCAGTCTCTCTaGATAGCTGTACTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTEAQSL*IAVLQV
Trigger: CACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTC...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: WGILTPIESTSLSHQMTAWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGACCTGGGTGAAGAGCTaGGATGGTTTTGAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMTWVKS*DGFEWG
Trigger: GCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGT...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTC +
Preference number: 2 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVASSSMS*PRGVDF
Trigger: GAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCT...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp GAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTGTTTCCTTCTCTGACTaGAATGTGGCATTGCTGAAA +
Preference number: 2 (lower is better)
Translates to: EVEIKGSHHVHPLRKALLVSFSD*NVALLK
Trigger: TTTCAGCAATGCCACATTCCAGTCAGAGAAGGAAAC...AAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR CCA 90 bp AGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTTCCTTGGTTTCCTTCTCTGACTaGAATGTGGCATTGCTGAAA +
Preference number: 2 (lower is better)
Translates to: RSRAAIMSTPLGKHFFSLVSFSD*NVALLK
Trigger: TTTCAGCAATGCCACATTCCAGTCAGAGAAGGAAAC...CAAGGAAAAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
3UTR-3UTR TCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATAGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGAC +
Preference number: 2 (lower is better)
Translates to: QTTKAMYIAIPTSHILWIAHAFS*AGAVHD
Trigger: GTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGC...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGAGTATCTCTCTCATaGTGGTTTCTTCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPRVSLS*WFLQGE
Trigger: CTCTCCCTGAAGAAACCATCATGAGAGAGATACTCT...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTAGAGTATCTCTCTCATaGTGGTTTCTTCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPRVSLS*WFLQGE
Trigger: CTCTCCCTGAAGAAACCATCATGAGAGAGATACTCT...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp TTCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCCAATGGCACCAGCATTaGCCATGGGGTTATGGGGGA +
Preference number: 2 (lower is better)
Translates to: FIPSHFVEILQHKIKLLCQWHQH*PWGYGG
Trigger: TCCCCCATAACCCCATGGTCAATGCTGGTGCCATTG...GCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
3UTR-3UTR TCA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGCTTGTCCAATGGGGGTaGCAGGCACATCATTCCCAT +
Preference number: 2 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMLVQWG*QAHHSH
Trigger: ATGGGAATGATGTGCCTGTCACCCCCATTGGACAAG...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp CTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGACATAGTTGTGGAAATTaGAGAGAGACACCAACTTCT +
Preference number: 2 (lower is better)
Translates to: LESLHQSISLMMVSSGRGHSCGN*RETPTS
Trigger: AGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATG...TCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCAAGTCACCAAATGACTaGTTGGTCCCCACTGAAGCA +
Preference number: 2 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSKSPND*LVPTEA
Trigger: TGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTT...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR GCA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGAAGTCACCAAATGACTaGTTGGTCCCCACTGAAGCA +
Preference number: 2 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWKSPND*LVPTEA
Trigger: TGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTT...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR GCA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR GCA 90 bp CAAGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACAGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: QASIRNLTTSMCPSAAATVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...TGTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp GTGCCTCAGGTTGTCATAGTTGTGGAAATTGAAGAGAGACACCAACTTCTGGCAGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: VPQVVIVVEIEERHQLLAVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...TGCCAGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATGACAACCTGAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp AAACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGGAAGAGTCAGTGCCTAGGGTaGTTATGGAGATGGCATAGG +
Preference number: 2 (lower is better)
Translates to: KPMYSFPAILLRYCNTWKSQCLG*LWRWHR
Trigger: CCTATGCCATCTCCATAAGCACCCTAGGCACTGACT...CTTCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
3UTR-3UTR GCA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGTACATGCCGCAGGAATaGATGAGGCTGAGGGTGTTG +
Preference number: 2 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMYMPQE*MRLRVL
Trigger: CAACACCCTCAGCCTCATGCATTCCTGCGGCATGTA...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATACATGCCGCAGGAATaGATGAGGCTGAGGGTGTTG +
Preference number: 2 (lower is better)
Translates to: QTTKAMYIAIPTSHILWIYMPQE*MRLRVL
Trigger: CAACACCCTCAGCCTCATGCATTCCTGCGGCATGTA...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCAACATGCAGAGCTGTaGGCGAGTCATAGTCTTTCT +
Preference number: 2 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYQHAEL*ASHSLS
Trigger: AGAAAGACTATGACTCGCGCACAGCTCTGCATGTTG...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR GCA 90 bp CTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGACAAAAGGATTCACTTTaGAAGCCTCGATCAGGAATT +
Preference number: 2 (lower is better)
Translates to: LESLHQSISLMMVSSGRGQKDSL*KPRSGI
Trigger: AATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTG...TCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp CTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACTATTTTTGGTGGTTATaGATTACATGTGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LHQSISLMMVSSGRGRGDYFWWL*ITCVAS
Trigger: GCTGGCCACACATGTAATCCATAACCACCAAAAATA...GTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCCACCAAATGACTGCTTaGTCCCCACTGAAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCHQMTA*SPLKQC
Trigger: ACACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTG...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATGTCTGCTGAGGGAATaGGGTATTTTGACTCCCATA +
Preference number: 2 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCICLLRE*GILTPI
Trigger: TATGGGAGTCAAAATACCCCATTCCCTCAGCAGACA...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCATGTCTGCTGAGGGAATaGGGTATTTTGACTCCCATA +
Preference number: 2 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPCLLRE*GILTPI
Trigger: TATGGGAGTCAAAATACCCCATTCCCTCAGCAGACA...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGAC +
Preference number: 2 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIAHAFS*AGAVHD
Trigger: GTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGC...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATAAAACCTTCGAAGAGCTaGGACATCGCCACTATAGGC +
Preference number: 2 (lower is better)
Translates to: QTTKAMYIAIPTSHILWIKPSKS*DIATIG
Trigger: GCCTATAGTGGCGATGTCTCAGCTCTTCGAAGGTTT...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR TCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCCACCTCCAGATGGTTaGACTGCACAGCATCATCCA +
Preference number: 2 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIPPPDG*TAQHHP
Trigger: TGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGG...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTATATTTTTGGTGGTTATaGATTACATGTGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LCLLREWGILTPIESTSLYFWWL*ITCVAS
Trigger: GCTGGCCACACATGTAATCCATAACCACCAAAAATA...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp GTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCTATTTTTGGTGGTTATaGATTACATGTGTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: VLCLLREWGILTPIESTSYFWWL*ITCVAS
Trigger: GCTGGCCACACATGTAATCCATAACCACCAAAAATA...GCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp TCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCTGTAGCGCAGGCCACTTaGCTCTTTGCCCACAAACTT +
Preference number: 2 (lower is better)
Translates to: SFPAILLRYCNTKSNFSAVAQAT*LFAHKL
Trigger: AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTAC...AGCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
3UTR-3UTR CCA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTGTTTCCTTCTCTGACTaGAATCTGAAGCAAACACCC +
Preference number: 2 (lower is better)
Translates to: WGILTPIESTSLSHQMTAVSFSD*NLKQTP
Trigger: GGGTGTTTGCTTCAGATTCCAGTCAGAGAAGGAAAC...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486433.5
3UTR-3UTR GCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR GCA 90 bp GTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCGGCCACTTGGCTCTTTaGCCACAAACTTGTGCACGT +
Preference number: 2 (lower is better)
Translates to: VFIPSHFVEILQHKIKLLGHLAL*PQTCAR
Trigger: ACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCC...GAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
3UTR-3UTR GCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCACAAAAGGATTCACTTTaGAAGCCTCGATCAGGAATT +
Preference number: 2 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPQKDSL*KPRSGI
Trigger: AATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTG...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTTGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR TCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTAGCACTTCTTTTCCTTaGGATAATAGCCGATGGCAT +
Preference number: 2 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTSTSFP*DNSRWH
Trigger: ATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGCT...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486433.5
3UTR-3UTR GCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTAAGTCACCAAATGACTaGTTGGTCCCCACTGAAGCA +
Preference number: 2 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIKSPND*LVPTEA
Trigger: TGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTT...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR GCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATAGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: QTTKAMYIAIPTSHILWIVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR GCA 90 bp GTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCAGTCAGTGCCTAGGGTaGTTATGGAGATGGCATAGG +
Preference number: 2 (lower is better)
Translates to: VFIPSHFVEILQHKIKLLSQCLG*LWRWHR
Trigger: CCTATGCCATCTCCATAAGCACCCTAGGCACTGACT...GAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
3UTR-3UTR GCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CCA 90 bp CACAAAATACTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTGTCTGCTGAGGGAATaGGGTATTTTGACTCCCATA +
Preference number: 2 (lower is better)
Translates to: HKILSLSIKLAVSSSSSMCLLRE*GILTPI
Trigger: TATGGGAGTCAAAATACCCCATTCCCTCAGCAGACA...CATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAGTATTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR TCA 72 bp TGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTGTaGTGGGGCAGATCCCACCGTTGGCGAGGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: CALLQHSAHSRL*WGRSHRWRGWL
Trigger: CAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp GTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGGGGCAGATCCCACCGTaGGCGAGGGTGGCTGCCATG +
Preference number: 3 (lower is better)
Translates to: VLFRISAPSRRGSNFRAQGQIPP*ARVAAM
Trigger: CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCC...CTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR CCA 72 bp CACCTGGTAGTGGGGTTAGAGAGCCACTGGGGCAGCTaGAGAGGACAGCATGCCATGGCGAAATGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: HLVVGLESHWGS*RGQHAMAKCSQ
Trigger: CTGGCTGCATTTCGCCATGGCATGCTGTCCTCTCCAGCTGCCCCAGTGGCTCTCTAACCCCACTACCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486896.5
3UTR GCA 72 bp AAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTaGATCTCGCTCATGCAGTCTCGGAGCCGAGGATCT +
Preference number: 3 (lower is better)
Translates to: KRPPLLDSWTTR*ISLMQSRSRGS
Trigger: AGATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR CCA 72 bp AGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTaGACCACGCGGTGCATCTCGCTCATGCAGTCTCGG +
Preference number: 3 (lower is better)
Translates to: RSRSKRPPLLDS*TTRCISLMQSR
Trigger: CCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR-3UTR CAA 90 bp TGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACCTGTCCTTGGCACCTGATACAGCTGACTaGGCTGGCAGGCCCACGTGG +
Preference number: 3 (lower is better)
Translates to: WLNCTASSRGMLPHLSLAPDTAD*AGRPTW
Trigger: CCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAGG...TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR TCA 72 bp CCCACCGTTGGCGAGGGTGGCTGCCATGACACTGCCTaGTTCACAAGTGACCTCCACAGAACACAGCTGGAA +
Preference number: 3 (lower is better)
Translates to: PTVGEGGCHDTA*FTSDLHRTQLE
Trigger: TTCCAGCTGTGTTCTGTGGAGGTCACTTGTGAATCAGGCAGTGTCATGGCAGCCACCCTCGCCAACGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR GCA 72 bp TACTGGACTCTTGGACCACGCGGTGCATCTCGCTCATaGAGTCTCGGAGCCGAGGATCTGATGTCTGCAGTC +
Preference number: 3 (lower is better)
Translates to: YWTLGPRGASRS*SLGAEDLMSAV
Trigger: GACTGCAGACATCAGATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR CCA 72 bp TTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTaGACTCTTGGACCACGCGGTGCATCTCGCTCATGC +
Preference number: 3 (lower is better)
Translates to: FGRDLGPRGHHY*TLGPRGASRSC
Trigger: GCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR GCA 72 bp GGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTaGCCACAAACTTGTGCACGTAGTCAGTGCCTAGGG +
Preference number: 3 (lower is better)
Translates to: GRACCSAGHLAL*PQTCARSQCLG
Trigger: CCCTAGGCACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
3UTR-3UTR CAA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCAGGGCAGATCCCACCGTaGGCGAGGGTGGCTGCCATG +
Preference number: 3 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPGQIPP*ARVAAM
Trigger: CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCC...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp GAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTCCTGATACAGCTGACTaGGCTGGCAGGCCCACGTGG +
Preference number: 3 (lower is better)
Translates to: EVEIKGSHHVHPLRKALLPDTAD*AGRPTW
Trigger: CCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAGG...AAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486433.5
3UTR-3UTR CAA 90 bp CCTCCAGTGAGCTCTTTGACATCCTCAAAGATGCGATCCACATGGCCCGTGAACACCACTACTGGACTCTaGGACCACGCGGTGCATCTC +
Preference number: 3 (lower is better)
Translates to: PPVSSLTSSKMRSTWPVNTTTGL*DHAVHL
Trigger: GAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGT...GTTCACGGGCCATGTGGATCGCATCTTTGAGGATGTCAAAGAGCTCACTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR GCA 72 bp TGGGGCAGCTGGAGAGGACAGCATGCCATGGCGAAATaGAGCCAGGGGCTAAGTAGCAAGGGAACTTACAAA +
Preference number: 3 (lower is better)
Translates to: WGSWRGQHAMAK*SQGLSSKGTYK
Trigger: TTTGTAAGTTCCCTTGCTACTTAGCCCCTGGCTGCATTTCGCCATGGCATGCTGTCCTCTCCAGCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486896.5
3UTR TCA 72 bp GCTTGTCCAATGGGGGTGACAGGCACATCATTCCCATaGCATTGGGTACCACCAGGAGGATGGCTCCTGATA +
Preference number: 3 (lower is better)
Translates to: ACPMGVTGTSFP*HWVPPGGWLLI
Trigger: TATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATTGGACAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp CTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAATGAGGCTGAGGGTGTaGCGCACTGCTTCAGCACTC +
Preference number: 3 (lower is better)
Translates to: LSIKLAVSSSSSMSWPRGMRLRV*RTASAL
Trigger: GAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCAT...TCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCACCTGATACAGCTGACTaGGCTGGCAGGCCCACGTGG +
Preference number: 3 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPPDTAD*AGRPTW
Trigger: CCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAGG...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp GCCTCCAGTGAGCTCTTTGACATCCTCAAAGATGCGATCCACATGGCCCGTGAAGTCAGGAGCACAATGTaGCTGCTCACACACTTTCGG +
Preference number: 3 (lower is better)
Translates to: ASSELFDILKDAIHMAREVRSTM*LLTHFR
Trigger: CCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGAC...TTCACGGGCCATGTGGATCGCATCTTTGAGGATGTCAAAGAGCTCACTGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR CCA 72 bp CTCATTGAGGGAGAGCTTGTTGTAGCGCAGGCCACTTaGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGT +
Preference number: 3 (lower is better)
Translates to: LIEGELVVAQAT*LFAHKLVHVVS
Trigger: ACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTCAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
3UTR-3UTR CAA 90 bp ATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACTCACCAAATGACTGCTaGGTCCCCACTGAAGCAGTG +
Preference number: 3 (lower is better)
Translates to: IIPMTLGTTRRMAPDTADSPNDC*VPTEAV
Trigger: CACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGA...GTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp AGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATGGCAGGCCACTTGGCTCTTaGCCCACAAACTTGTGCACG +
Preference number: 3 (lower is better)
Translates to: SNMQSCARVIVFLFHIHGRPLGS*PTNLCT
Trigger: CGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCT...GCCATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR CAA 90 bp AGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATGGCTGTAGCGCAGGCCACTaGGCTCTTTGCCCACAAACT +
Preference number: 3 (lower is better)
Translates to: SNMQSCARVIVFLFHIHGCSAGH*ALCPQT
Trigger: AGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACA...GCCATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR CAA 90 bp ACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCATCATTCCCAGCCATTTaGTTGAGATACTGCAACACA +
Preference number: 3 (lower is better)
Translates to: TPTSGRSWSPYGCSPACPSFPAI*LRYCNT
Trigger: TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA...TGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR CAA 90 bp CGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGCTCTCCATAGTATTTTaGGTGGTTATGGATTACATG +
Preference number: 3 (lower is better)
Translates to: RISAPSRRGSNFRAQCLRLSIVF*VVMDYM
Trigger: CATGTAATCCATAACCACCAAAAATACTATGGAGAG...CCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp TGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATTCACCAAATGACTGCTaGGTCCCCACTGAAGCAGTG +
Preference number: 3 (lower is better)
Translates to: CSNMQSCARVIVFLFHIHSPNDC*VPTEAV
Trigger: CACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGA...ATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp GTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCTCACCAAATGACTGCTaGGTCCCCACTGAAGCAGTG +
Preference number: 3 (lower is better)
Translates to: VLCLLREWGILTPIESTSSPNDC*VPTEAV
Trigger: CACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGA...GCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp CAAGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACATCACCAAATGACTGCTaGGTCCCCACTGAAGCAGTG +
Preference number: 3 (lower is better)
Translates to: QASIRNLTTSMCPSAAATSPNDC*VPTEAV
Trigger: CACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGA...TGTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp CCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGGAAGAGATGTAGCGCAGGCCACTaGGCTCTTTGCCCACAAACT +
Preference number: 3 (lower is better)
Translates to: PMYSFPAILLRYCNTWKRCSAGH*ALCPQT
Trigger: AGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACA...TCTCTTCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
3UTR-3UTR CAA 90 bp GATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATACCACCTCCAGATGGTaGAACTGCACAGCATCATCC +
Preference number: 3 (lower is better)
Translates to: DMYMCMVARVPPPEYLSHTTSRW*NCTASS
Trigger: GGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGT...ATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp GAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTTCCCAGCCATTTTGTaGAGATACTGCAACACCTGG +
Preference number: 3 (lower is better)
Translates to: EVEIKGSHHVHPLRKALLFPAIL*RYCNTW
Trigger: CCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAA...AAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486896.5
3UTR TCA 72 bp TATGGATTACATGTGTGGCCAGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGACCTGTGCTCATACCAT +
Preference number: 3 (lower is better)
Translates to: YGLHVWPAHAFS*AGAVHDLCSYH
Trigger: ATGGTATGAGCACAGGTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGCTGGCCACACATGTAATCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATTCACCAAATGACTGCTaGGTCCCCACTGAAGCAGTG +
Preference number: 3 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYSPNDC*VPTEAV
Trigger: CACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGA...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGAAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACT +
Preference number: 3 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRREWGI*TPIEST
Trigger: AGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCT...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp CTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACT +
Preference number: 3 (lower is better)
Translates to: LESLHQSISLMMVSSGRGREWGI*TPIEST
Trigger: AGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCT...TCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp CTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACT +
Preference number: 3 (lower is better)
Translates to: LHQSISLMMVSSGRGRGDREWGI*TPIEST
Trigger: AGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCT...GTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGATTGTTACAGTCCATCTaGATCAGGGAGCTGACAACA +
Preference number: 3 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRLLQSI*IRELTT
Trigger: TGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAA...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR CAA 90 bp GTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACT +
Preference number: 3 (lower is better)
Translates to: VLAKGSRFLQTTKAMYIAREWGI*TPIEST
Trigger: AGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCT...GGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp TTGCTGAAACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAGGCCACTTGGCTCTTaGCCCACAAACTTGTGCACG +
Preference number: 3 (lower is better)
Translates to: LLKPMYSFPAILLRYCNTRPLGS*PTNLCT
Trigger: CGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCT...TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTTCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
3UTR-3UTR CAA 90 bp ATCAAACTTCTCTGCTTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATTGTAGCGCAGGCCACTaGGCTCTTTGCCCACAAACT +
Preference number: 3 (lower is better)
Translates to: IKLLCFVTVHLDQGADNNCSAGH*ALCPQT
Trigger: AGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACA...ATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
3UTR-3UTR CAA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTATGAGGCTGAGGGTGTaGCGCACTGCTTCAGCACTC +
Preference number: 3 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIMRLRV*RTASAL
Trigger: GAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCAT...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAGCAGCAAATAACAGGTaGACCACAGTCTTGTTCCGA +
Preference number: 3 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPAANNR*TTVLFR
Trigger: TCGGAACAAGACTGTGGTCAACCTGTTATTTGCTGC...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTGCAAAAGGATTCACTTaGCAAGCCTCGATCAGGAAT +
Preference number: 3 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSAKGFT*QASIRN
Trigger: ATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTGC...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR CCA 72 bp GTGAGCTCTTTGACATCCTCAAAGATGCGATCCACATaGCCCGTGAACTCCTCAAAATCAGGAATGACAAAC +
Preference number: 3 (lower is better)
Translates to: VSSLTSSKMRST*PVNSSKSGMTN
Trigger: GTTTGTCATTCCTGATTTTGAGGAGTTCACGGGCCATGTGGATCGCATCTTTGAGGATGTCAAAGAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR-3UTR CAA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTCTCTCCATAGTATTTTaGGTGGTTATGGATTACATG +
Preference number: 3 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSLSIVF*VVMDYM
Trigger: CATGTAATCCATAACCACCAAAAATACTATGGAGAG...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp GTGCCTCAGGTTGTCATAGTTGTGGAAATTGAAGAGAGACACCAACTTCTGGCAGACTGGAATGTGGCATaGCTGAAACCCATGTATTCA +
Preference number: 3 (lower is better)
Translates to: VPQVVIVVEIEERHQLLADWNVA*LKPMYS
Trigger: TGAATACATGGGTTTCAGCAATGCCACATTCCAGTC...TGCCAGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATGACAACCTGAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR CAA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGGCAGCAAATAACAGGTaGACCACAGTCTTGTTCCGA +
Preference number: 3 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWAANNR*TTVLFR
Trigger: TCGGAACAAGACTGTGGTCAACCTGTTATTTGCTGC...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR CCA 72 bp ATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAG +
Preference number: 3 (lower is better)
Translates to: IKLAVSSSSSMS*PRGVDFSRLLK
Trigger: CTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACT +
Preference number: 3 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYREWGI*TPIEST
Trigger: AGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCT...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGTTGCCCCACCTGTCCTaGGCAAAAGGATTCACTTTG +
Preference number: 3 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMLPHLS*AKGFTL
Trigger: CAAAGTGAATCCTTTTGCCAAGGACAGGTGGGGCAA...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp GCAAGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACCTCTCCATAGTATTTTaGGTGGTTATGGATTACATG +
Preference number: 3 (lower is better)
Translates to: ASLDQEFNNFDVSFSCSNLSIVF*VVMDYM
Trigger: CATGTAATCCATAACCACCAAAAATACTATGGAGAG...GTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACT +
Preference number: 3 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTREWGI*TPIEST
Trigger: AGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCT...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTCTCTGTCTATAAAATaGGCTGTTAGCAGTAGCAGC +
Preference number: 3 (lower is better)
Translates to: WGILTPIESTSLSHQMTASLSIK*AVSSSS
Trigger: GCTGCTACTGCTAACAGCCAATTTTATAGACAGAGA...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp AGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACATGCTCTCCATAGTATTTTaGGTGGTTATGGATTACATG +
Preference number: 3 (lower is better)
Translates to: SLDQEFNNFDVSFSCSNMLSIVF*VVMDYM
Trigger: CATGTAATCCATAACCACCAAAAATACTATGGAGAG...CATGTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR-3UTR CAA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATCTCTGTCTATAAAATaGGCTGTTAGCAGTAGCAGC +
Preference number: 3 (lower is better)
Translates to: QTTKAMYIAIPTSHILWISLSIK*AVSSSS
Trigger: GCTGCTACTGCTAACAGCCAATTTTATAGACAGAGA...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTTTCCCAGCCATTTTGTaGAGATACTGCAACACAAAA +
Preference number: 3 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVAFPAIL*RYCNTK
Trigger: TTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAA...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424141.6
3UTR-3UTR CAA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCCTCTCCATAGTATTTTaGGTGGTTATGGATTACATG +
Preference number: 3 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCLSIVF*VVMDYM
Trigger: CATGTAATCCATAACCACCAAAAATACTATGGAGAG...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR-3UTR CAA 90 bp GTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTTGTTACAGTCCATCTaGATCAGGGAGCTGACAACA +
Preference number: 3 (lower is better)
Translates to: VFIPSHFVEILQHKIKLLLLQSI*IRELTT
Trigger: TGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAA...GAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
3UTR-3UTR CAA 90 bp TTGCTGAAACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACATCAAACTTCTCTGCTTaGTTACAGTCCATCTTGATC +
Preference number: 3 (lower is better)
Translates to: LLKPMYSFPAILLRYCNTSNFSA*LQSILI
Trigger: GATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGA...TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTTCAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR GCA 90 bp TCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATCTCGCTGCCTCACTGAGGTGGTaGCGGACGCCCCCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SVQEATTTGLLDHAVHLAASLRW*RTPPPR
Trigger: CCTTGGCGGGGGCGTCCGGCACCACCTCAGTGAGGC...AGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp CACCCCACAGGTCTGGGTTTGACTTGGCCAGCTGAGGGATGTAGGCTGCCACTTGCAAGCCTCCGGCTCTaGAGGTGCGCCCGGGACCTC +
Preference number: 4 (lower is better)
Translates to: HPTGLGLTWPAEGCRLPLASLRL*RCARDL
Trigger: GAGGTCCCGGGCGCACCTGCAGAGCCGGAGGCTTGC...AAGTGGCAGCCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp ATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATCTCCTCGCCCGCAGTGACTaGCAGCCCGGCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ISVQEATTTGLLDHAVHLLARSD*QPGSGP
Trigger: AGGCCCTGAGCCGGGCTGGCAGTCACTGCGGGCGAG...GAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp TCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATCTCGCGGCTCAGGGCCTTCTaGAGAGCCTTCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SRSKRPPLLDSWTTRCISRLRAF*RAFMER
Trigger: GCGCTCCATGAAGGCTCTGCAGAAGGCCCTGAGCCG...CGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp TACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCCTCGCCCGCAGTGACTaGCAGCCCGGCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: YLEAQSLWIAVLQVSSEALARSD*QPGSGP
Trigger: AGGCCCTGAGCCGGGCTGGCAGTCACTGCGGGCGAG...GGCCTCAGAGGACACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTCAAGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCGCCTCACTGAGGTGGTaGCGGACGCCCCCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: YLEAQSLWIAVLQVSSEAASLRW*RTPPPR
Trigger: CCTTGGCGGGGGCGTCCGGCACCACCTCAGTGAGGC...GGCCTCAGAGGACACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTCAAGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGCAGCCTCACTGAGGTGGTaGCGGACGCCCCCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GRACCSAGHLALCPQTCAASLRW*RTPPPR
Trigger: CCTTGGCGGGGGCGTCCGGCACCACCTCAGTGAGGC...TGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CCA 90 bp AGAACACAGCTGGAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGGCGGCCTCACTGAGGTaGTGCCGGACGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: RTQLEVEIKGSHHVHPLRAASLR*CRTPPP
Trigger: TGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGC...CCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTCCAGCTGTGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
CDS-3UTR CCA 90 bp ATGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCGGAAGACGGAGAATGTaGGCCCGGTGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: MHEAEGVAHCFSTQHTLAGRRRM*ARWVGL
Trigger: CAGCCCCACCCACCGGGCCCACATTCTCCGTCTTCC...GGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486433.5
CDS-3UTR TCA 90 bp GGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACTTTCGGAAGAGATCCTCCTCGCCCGCAGTaGCTGCCAGCCCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GMPGSGAQCCCSHTFGRDPPRPQ*LPARLR
Trigger: CCTGAGCCGGGCTGGCAGTCACTGCGGGCGAGGAGG...ATCTCTTCCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR TCA 90 bp TCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATCTCGTCGGAGCCGAGGATCTaGTGTCTGCAGTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SRSKRPPLLDSWTTRCISSEPRI*CLQSSG
Trigger: GCCACTGGACTGCAGACATCAGATCCTCGGCTCCGA...CGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp ATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACGCGGCCTCACTGAGGTaGTGCCGGACGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: IIPMTLGTTRRMAPDTADAASLR*CRTPPP
Trigger: TGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGC...GTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
CDS-3UTR CCA 90 bp TTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCGGCTGGTGGCTGTGTaGCGTCTCTCTGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LFRISAPSRRGSNFRAQCRLVAV*RLSALR
Trigger: GCGCAGGGCAGAGAGACGCCACACAGCCACCAGCCG...GCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
CDS-3UTR CCA 90 bp AAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATCTCGCTCATGCAGTGGTGCTGCGGCTGGTaGCTGTGTGGCGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KRPPLLDSWTTRCISLMQWCCGW*LCGVSL
Trigger: CAGAGAGACGCCACACAGCCACCAGCCGCAGCACCA...CTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp TCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATCTCGCTAGGGAGCGCTGGACCTaGAAGACGGAGAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: SVQEATTTGLLDHAVHLARERWT*KTENVG
Trigger: GCCCACATTCTCCGTCTTCCAGGTCCAGCGCTCCCT...AGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR CAA 72 bp AGCACACTCTCGCCTGTGATGGGGCAGATCCCACCGTaGGCGAGGGTGGCTGCCATGACACTGCCTGATTCA +
Preference number: 4 (lower is better)
Translates to: STLSPVMGQIPP*ARVAAMTLPDS
Trigger: TGAATCAGGCAGTGTCATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
3UTR CAA 72 bp GGTACCACCAGGAGGATGGCTCCTGATACAGCTGACTaGGCTGGCAGGCCCACGTGGAAGGCAAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: GTTRRMAPDTAD*AGRPTWKANWP
Trigger: TGGCCAGTTTGCCTTCCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp ACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGCCTCCTCGCCCGCAGTaGCTGCCAGCCCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TPIESTSLSHQMTAWSPLPPRPQ*LPARLR
Trigger: CCTGAGCCGGGCTGGCAGTCACTGCGGGCGAGGAGG...CAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTTCGGAGCCGAGGATCTaGTGTCTGCAGTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: CMRLRVLRTASALSTLSPSEPRI*CLQSSG
Trigger: GCCACTGGACTGCAGACATCAGATCCTCGGCTCCGA...AGGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAGCAAGCCTCCGGCTCTaGAGGTGCGCCCGGGACCTC +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLASLRL*RCARDL
Trigger: GAGGTCCCGGGCGCACCTGCAGAGCCGGAGGCTTGC...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGGCAAGCCTCCGGCTCTaGAGGTGCGCCCGGGACCTC +
Preference number: 4 (lower is better)
Translates to: LALCPQTCARSQCLGCLWASLRL*RCARDL
Trigger: GAGGTCCCGGGCGCACCTGCAGAGCCGGAGGCTTGC...CCATAAGCACCCTAGGCACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486896.5
ENST00000494474.5
CDS-3UTR GCA 90 bp ATTGAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGCAAGCCTCCGGCTCTaGAGGTGCGCCCGGGACCTC +
Preference number: 4 (lower is better)
Translates to: IEGELVVAQATWLFAHKLASLRL*RCARDL
Trigger: GAGGTCCCGGGCGCACCTGCAGAGCCGGAGGCTTGC...AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486896.5
ENST00000494474.5
CDS-3UTR GCA 90 bp AGAGACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGCCTTCATGGAGCGCATaGCCCAGCAAGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: RDTNFWQKLVPLWLFPSLPSWSA*PSKPPA
Trigger: AGCCGGAGGCTTGCTGGGGCATGCGCTCCATGAAGG...CAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479952.5
ENST00000486433.5
CDS-3UTR GCA 90 bp TTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGCTCGCCCGCAGTGACTaGCAGCCCGGCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LALCPQTCARSQCLGCLWLARSD*QPGSGP
Trigger: AGGCCCTGAGCCGGGCTGGCAGTCACTGCGGGCGAG...CCATAAGCACCCTAGGCACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR GCA 90 bp GCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATGACACTGCCCCAGGCGGGACAGCATaGCACTTTCTGATGAATCAT +
Preference number: 4 (lower is better)
Translates to: ACDGADPTVGEGGCHDTAPGGTA*HFLMNH
Trigger: ATGATTCATCAGAAAGTGGCATGCTGTCCCGCCTGG...GGCAGTGTCATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
CDS-3UTR GCA 90 bp ACCACGCGGTGCATCTCGCTCATGCAGTCTCGGAGCCGAGGATCTGATGTCTGCGGTGCATCTCGCTCATaGAGTCTCGGAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: TTRCISLMQSRSRGSDVCGASRS*SLGAED
Trigger: ATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACC...GCAGACATCAGATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACCGCGTGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp ACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATGGGCTTCACACAGGACTaGAGGCAGAAGGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: TLSPVMGQIPPLARVAAMGFTQD*RQKGIF
Trigger: AAAGATCCCCTTCTGCCTGCAGTCCTGTGTGAAGCC...CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp AGAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCAGCAGGAGAAGGGGCCTaGCCCTTTAAAGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RDLGPRGHHYWTLGPRGAAGEGA*PFKAGS
Trigger: GGAGCCAGCTTTAAAGGGGCAGGCCCCTTCTCCTGC...TGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGGCGGCCTCACTGAGGTaGTGCCGGACGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: VARVPPPEYLSHDGFFREAASLR*CRTPPP
Trigger: TGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGC...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCCGGCTGGTGGCTGTGTaGCGTCTCTCTGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSRLVAV*RLSALR
Trigger: GCGCAGGGCAGAGAGACGCCACACAGCCACCAGCCG...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGAGACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTGGTGCTGCGGCTGGTaGCTGTGTGGCGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RDTNFWQKLVPLWLFPSLWCCGW*LCGVSL
Trigger: CAGAGAGACGCCACACAGCCACCAGCCGCAGCACCA...CAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
CDS-3UTR CCA 90 bp TCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATCTCGCCACTACTGGACTCTTaGACCACGCGGTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: SRSKRPPLLDSWTTRCISPLLDS*TTRCIS
Trigger: CGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGG...CGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
3UTR CAA 72 bp GAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTaGGACCACGCGGTGCATCTCGCTCATGCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: EISVQEATTTGL*DHAVHLAHAVS
Trigger: CGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR TCA 90 bp GTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCCTCCTCGCCCGCAGTaGCTGCCAGCCCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VLCLLREWGILTPIESTSPPRPQ*LPARLR
Trigger: CCTGAGCCGGGCTGGCAGTCACTGCGGGCGAGGAGG...GCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACCCTCCTCGCCCGCAGTaGCTGCCAGCCCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LCTLSAEGMGYFDSHRKHPPRPQ*LPARLR
Trigger: CCTGAGCCGGGCTGGCAGTCACTGCGGGCGAGGAGG...GTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCCCTCCTCGCCCGCAGTaGCTGCCAGCCCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VLAKGSRFLQTTKAMYIAPPRPQ*LPARLR
Trigger: CCTGAGCCGGGCTGGCAGTCACTGCGGGCGAGGAGG...GGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp ATAAGGCTTCTAGTATGGGCTGGTGCACCTGGTAGTGGGGTTAGAGAGCCACTGTGCGGGGGAGTTCTGTaGGGGAGCGCTGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: IRLLVWAGAPGSGVREPLCGGVL*GSAGPG
Trigger: TCCAGGTCCAGCGCTCCCTCACAGAACTCCCCCGCA...CAGTGGCTCTCTAACCCCACTACCAGGTGCACCAGCCCATACTAGAAGCCTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR TCA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCTGCGGGGGAGTTCTGTaGGGGAGCGCTGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSCGGVL*GSAGPG
Trigger: TCCAGGTCCAGCGCTCCCTCACAGAACTCCCCCGCA...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCCTTCATGGAGCGCATaGCCCAGCAAGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: FRKRSRSKRPPLLDSWTTPSWSA*PSKPPA
Trigger: AGCCGGAGGCTTGCTGGGGCATGCGCTCCATGAAGG...CGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp GGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGCACCTTCATGGAGCGCATaGCCCAGCAAGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: GRACCSAGHLALCPQTCAPSWSA*PSKPPA
Trigger: AGCCGGAGGCTTGCTGGGGCATGCGCTCCATGAAGG...TGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486896.5
ENST00000494474.5
CDS-3UTR GCA 90 bp CTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTCGCCCGCAGTGACTaGCAGCCCGGCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LHQSISLMMVSSGRGRGDLARSD*QPGSGP
Trigger: AGGCCCTGAGCCGGGCTGGCAGTCACTGCGGGCGAG...GTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTCAGGGCCTCAGCTGCTaGCTCAGCCTGAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: CMRLRVLRTASALSTLSPQGLSC*LSLSFR
Trigger: TCTGAAACTCAGGCTGAGGCAGCAGCTGAGGCCCTG...AGGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGCGGCCTCACTGAGGTaGTGCCGGACGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVAASLR*CRTPPP
Trigger: TGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGC...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACGCGGCCTCACTGAGGTaGTGCCGGACGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHAASLR*CRTPPP
Trigger: TGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGC...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTCCTCAAAATCAGGAATGACAAACTTCTTTCGGAATGCCTGGGTCAGGAGCACGCGGCCTCACTGAGGTaGTGCCGGACGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LLKIRNDKLLSECLGQEHAASLR*CRTPPP
Trigger: TGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGC...GTGCTCCTGACCCAGGCATTCCGAAAGAAGTTTGTCATTCCTGATTTTGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp TCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCGCGGCCTCACTGAGGTaGTGCCGGACGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SVDMYMCMVARVPPPEYLAASLR*CRTPPP
Trigger: TGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGC...GAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACTTTCGGAAGAGATCTCCGGCTGGTGGCTGTGTaGCGTCTCTCTGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: MPGSGAQCCCSHTFGRDLRLVAV*RLSALR
Trigger: GCGCAGGGCAGAGAGACGCCACACAGCCACCAGCCG...GAGATCTCTTCCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp TACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCTGGTGCTGCGGCTGGTaGCTGTGTGGCGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: YLEAQSLWIAVLQVSSEAWCCGW*LCGVSL
Trigger: CAGAGAGACGCCACACAGCCACCAGCCGCAGCACCA...GGCCTCAGAGGACACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTCAAGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCAATTGGTGCTGCGGCTGGTaGCTGTGTGGCGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TNFWQKLVPLWLFPSLSNWCCGW*LCGVSL
Trigger: CAGAGAGACGCCACACAGCCACCAGCCGCAGCACCA...ATTGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
CDS-3UTR CCA 90 bp GGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGCATGGTGCTGCGGCTGGTaGCTGTGTGGCGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GRACCSAGHLALCPQTCAWCCGW*LCGVSL
Trigger: CAGAGAGACGCCACACAGCCACCAGCCGCAGCACCA...TGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CCA 90 bp GGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGCATCCTGGTGCTGCGGCTaGTGGCTGTGTGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: GRACCSAGHLALCPQTCASWCCG*WLCGVS
Trigger: AGAGACGCCACACAGCCACCAGCCGCAGCACCAGGA...TGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CCA 90 bp GCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATGACACTGCCGCAGTGGTGAACTTGTaGATAGGGATTCGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: ACDGADPTVGEGGCHDTAAVVNL*IGIRSC
Trigger: ACAGGAACGAATCCCTATCCACAAGTTCACCACTGC...GGCAGTGTCATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGAGAGGCCACCACTACTaGACTCTTGGACCACGCGGT +
Preference number: 4 (lower is better)
Translates to: RISAPSRRGSNFRAQCLRRGHHY*TLGPRG
Trigger: ACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCT...CCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp ACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCAATGCTGGCAGGCCCACGTaGAAGGCAAACTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TNFWQKLVPLWLFPSLSNAGRPT*KANWPE
Trigger: CTCTGGCCAGTTTGCCTTCCACGTGGGCCTGCCAGC...ATTGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACACCTCTAGCTGTGGCTaGGAAGGAGGGGCGGAGCGA +
Preference number: 4 (lower is better)
Translates to: LSEEISVQEATTTGLLDHTSSCG*EGGAER
Trigger: TCGCTCCGCCCCTCCTTCCCAGCCACAGCTAGAGGT...GTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR TCA 90 bp TCCAATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGTCGGAGCCGAGGATCTaGTGTCTGCAGTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SNGGDRHIIPMTLGTTRRSEPRI*CLQSSG
Trigger: GCCACTGGACTGCAGACATCAGATCCTCGGCTCCGA...CCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACTTGGCTGGCAGGCTGGAGATGGCATAGGTaGGGGGCTTCACACAGGACT +
Preference number: 4 (lower is better)
Translates to: HWVPPGGWLLIQLTWLAGWRWHR*GASHRT
Trigger: AGTCCTGTGTGAAGCCCCTCACCTATGCCATCTCCA...GCCTGCCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp ATGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTGGAGATGGCATAGGTaGGGGGCTTCACACAGGACT +
Preference number: 4 (lower is better)
Translates to: MHEAEGVAHCFSTQHTLAWRWHR*GASHRT
Trigger: AGTCCTGTGTGAAGCCCCTCACCTATGCCATCTCCA...GGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp TTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACTTTCGGAAGTGCGGGGGAGTTCTGTaGGGGAGCGCTGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: FRNAWVRSTMLLLTHFRKCGGVL*GSAGPG
Trigger: TCCAGGTCCAGCGCTCCCTCACAGAACTCCCCCGCA...CTTCCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTACTCGCCCGCAGTGACTaGCAGCCCGGCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVLARSD*QPGSGP
Trigger: AGGCCCTGAGCCGGGCTGGCAGTCACTGCGGGCGAG...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTCATCCAGGGGAATGTTaGCCCACCTGTCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CMRLRVLRTASALSTLSPHPGEC*PTCPWQ
Trigger: TTGCCAAGGACAGGTGGGGCAACATTCCCCTGGATG...AGGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp TTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACTTGGCTGGCAGGCCCCCAGGCGGGACAGCATaGCACTTTCTGATGAATCAC +
Preference number: 4 (lower is better)
Translates to: LGTTRRMAPDTADLAGRPPGGTA*HFLMNH
Trigger: GTGATTCATCAGAAAGTGGCATGCTGTCCCGCCTGG...GGGCCTGCCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539272.5
CDS-3UTR GCA 90 bp AGGCTTCTAGTATGGGCTGGTGCACCTGGTAGTGGGGTTAGAGAGCCACTGGGGCTGGAGAGGACAGCATaGCATGGCGAAATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RLLVWAGAPGSGVREPLGLERTA*HGEMQP
Trigger: TGGCTGCATTTCGCCATGGCATGCTGTCCTCTCCAG...CCCCAGTGGCTCTCTAACCCCACTACCAGGTGCACCAGCCCATACTAGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CCA 90 bp AGAGACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCTGCAGAGCCTTCATaGAGCGCATGCCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RDTNFWQKLVPLWLFPSLSAEPS*SACPSK
Trigger: CTTGCTGGGGCATGCGCTCCATGAAGGCTCTGCAGA...CAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
CDS-3UTR CCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGCGGCTGGTGGCTGTGTaGCGTCTCTCTGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: VARVPPPEYLSHDGFFRERLVAV*RLSALR
Trigger: GCGCAGGGCAGAGAGACGCCACACAGCCACCAGCCG...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ATCTCGCTCATGCAGTCTCGGAGCCGAGGATCTGATGTCTGCAGTCCAGTGGCCGGTCTGGGTTTGACTTaGCCAGCTGAGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: ISLMQSRSRGSDVCSPVAGLGLT*PAEGCR
Trigger: CCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACC...GGCCACTGGACTGCAGACATCAGATCCTCGGCTCCGAGACTGCATGAGCGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp TGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTGGTCTGGGTTTGACTTaGCCAGCTGAGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: CMRLRVLRTASALSTLSPGLGLT*PAEGCR
Trigger: CCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACC...AGGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp GCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGGCTGCCATGACACTGCCTGTCTGCTGAGGGAATaGGGTATTTTGACTCCCATA +
Preference number: 4 (lower is better)
Translates to: ACDGADPTVGEGGCHDTACLLRE*GILTPI
Trigger: TATGGGAGTCAAAATACCCCATTCCCTCAGCAGACA...GGCAGTGTCATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAGGAAGACGGAGAATGTaGGCCCGGTGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLGRRRM*ARWVGL
Trigger: CAGCCCCACCCACCGGGCCCACATTCTCCGTCTTCC...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGATGTCGGAGCCGAGGATCTaGTGTCTGCAGTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: NGGDRHIIPMTLGTTRRMSEPRI*CLQSSG
Trigger: GCCACTGGACTGCAGACATCAGATCCTCGGCTCCGA...CATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CCACCACTACTGGACTCTTGGACCACGCGGTGCATCTCGCTCATGCAGTCTCGGGATCCACATGGCCCGTaGACTCCTCAAAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: PPLLDSWTTRCISLMQSRDPHGP*TPQNQE
Trigger: TTCCTGATTTTGAGGAGTTCACGGGCCATGTGGATC...CCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR TCA 90 bp GCTCACACACTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCCCACAGGTCTGGGTTTaGCTTGGCCAGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: AHTLSEEISVQEATTTGLPQVWV*LGQLRD
Trigger: ATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGG...GAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAGTGTGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR TCA 90 bp CCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCAATGCAATGGCACCAGCATTaGCCATGGGGTTATGGGGGA +
Preference number: 4 (lower is better)
Translates to: PTSGRSWSPYGCSPACPMQWHQH*PWGYGG
Trigger: TCCCCCATAACCCCATGGTCAATGCTGGTGCCATTG...CATTGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp TTGACCACAGTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGGCTCAGGGCCTTCTaGAGAGCCTTCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: LTTVLFRISAPSRRGSNFRLRAF*RAFMER
Trigger: GCGCTCCATGAAGGCTCTGCAGAAGGCCCTGAGCCG...GAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGTGGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
CDS-3UTR GCA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATCTCGCCCGCAGTGACTaGCAGCCCGGCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDLARSD*QPGSGP
Trigger: AGGCCCTGAGCCGGGCTGGCAGTCACTGCGGGCGAG...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGCCTCACTGAGGTGGTaGCGGACGCCCCCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPASLRW*RTPPPR
Trigger: CCTTGGCGGGGGCGTCCGGCACCACCTCAGTGAGGC...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACATGGCCTCACTGAGGTGGTaGCGGACGCCCCCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SLDQEFNNFDVSFSCSNMASLRW*RTPPPR
Trigger: CCTTGGCGGGGGCGTCCGGCACCACCTCAGTGAGGC...CATGTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
CDS-3UTR GCA 90 bp GACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACAGGGCCTCAGCTGCTaGCTCAGCCTGAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: DHLQMVELHSIIQGNVAPQGLSC*LSLSFR
Trigger: TCTGAAACTCAGGCTGAGGCAGCAGCTGAGGCCCTG...TGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACCGGCTGGTGGCTGTGTaGCGTCTCTCTGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LCTLSAEGMGYFDSHRKHRLVAV*RLSALR
Trigger: GCGCAGGGCAGAGAGACGCCACACAGCCACCAGCCG...GTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTGACCACAGTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCTGGTGCTGCGGCTGGTaGCTGTGTGGCGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LTTVLFRISAPSRRGSNFWCCGW*LCGVSL
Trigger: CAGAGAGACGCCACACAGCCACCAGCCGCAGCACCA...GAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGTGGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
CDS-3UTR CCA 90 bp CCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTGGGTGGTGCTGCGGCTGGTaGCTGTGTGGCGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PEYLSHDGFFRERKRRPGWCCGW*LCGVSL
Trigger: CAGAGAGACGCCACACAGCCACCAGCCGCAGCACCA...CCCAGGTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACTTTCGGAAGATCCTGGTGCTGCGGCTaGTGGCTGTGTGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: FGMPGSGAQCCCSHTFGRSWCCG*WLCGVS
Trigger: AGAGACGCCACACAGCCACCAGCCGCAGCACCAGGA...TCTTCCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp GACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACCACTACTGGACTCTTaGACCACGCGGTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: DHLQMVELHSIIQGNVAPPLLDS*TTRCIS
Trigger: CGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGG...TGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CTATGGCTGTTCCCCAGCTTGTCCAATGGGGGTGACAGGCACATCATTCCCATGAGAGGCCACCACTACTaGACTCTTGGACCACGCGGT +
Preference number: 4 (lower is better)
Translates to: LWLFPSLSNGGDRHIIPMRGHHY*TLGPRG
Trigger: ACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCT...CATGGGAATGATGTGCCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp TTGAAGAGAGACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGAGGCCACCACTACTaGACTCTTGGACCACGCGGT +
Preference number: 4 (lower is better)
Translates to: LKRDTNFWQKLVPLWLFPRGHHY*TLGPRG
Trigger: ACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCT...GGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGTCTCTCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp AGGCTTCTAGTATGGGCTGGTGCACCTGGTAGTGGGGTTAGAGAGCCACTGGGGGTAGCGCAGGCCACTTaGCTCTTTGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: RLLVWAGAPGSGVREPLGVAQAT*LFAHKL
Trigger: AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTAC...CCCCAGTGGCTCTCTAACCCCACTACCAGGTGCACCAGCCCATACTAGAAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CCA 90 bp ATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACGCTGGCAGGCCCACGTaGAAGGCAAACTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: IIPMTLGTTRRMAPDTADAGRPT*KANWPE
Trigger: CTCTGGCCAGTTTGCCTTCCACGTGGGCCTGCCAGC...GTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAGCTGGCAGGCCCACGTaGAAGGCAAACTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLAGRPT*KANWPE
Trigger: CTCTGGCCAGTTTGCCTTCCACGTGGGCCTGCCAGC...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCCTGATACAGCTGACTTaGCTGGCAGGCCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: YLEAQSLWIAVLQVSSEALIQLT*LAGPRG
Trigger: TCCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAG...GGCCTCAGAGGACACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTCAAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGCTGATACAGCTGACTTaGCTGGCAGGCCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: EGELVVAQATWLFAHKLVLIQLT*LAGPRG
Trigger: TCCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAG...CACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424141.6
CDS-3UTR CCA 90 bp ATTGAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTACCTCTAGCTGTGGCTaGGAAGGAGGGGCGGAGCGA +
Preference number: 4 (lower is better)
Translates to: IEGELVVAQATWLFAHKLTSSCG*EGGAER
Trigger: TCGCTCCGCCCCTCCTTCCCAGCCACAGCTAGAGGT...AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486896.5
ENST00000494474.5
CDS-3UTR TCA 90 bp GTGCTCATACCATGCTTTCTAAGTTCTCTTTGGACAGGGCCTCAGCTGCTGCCTTCGGAGCCGAGGATCTaGTGTCTGCAGTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: VLIPCFLSSLWTGPQLLPSEPRI*CLQSSG
Trigger: GCCACTGGACTGCAGACATCAGATCCTCGGCTCCGA...AGGCAGCAGCTGAGGCCCTGTCCAAAGAGAACTTAGAAAGCATGGTATGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGGATCCACATGGCCCGTaGACTCCTCAAAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: RISAPSRRGSNFRAQCLRDPHGP*TPQNQE
Trigger: TTCCTGATTTTGAGGAGTTCACGGGCCATGTGGATC...CCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp ACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCAATCAATGGCACCAGCATTaGCCATGGGGTTATGGGGGA +
Preference number: 4 (lower is better)
Translates to: TNFWQKLVPLWLFPSLSNQWHQH*PWGYGG
Trigger: TCCCCCATAACCCCATGGTCAATGCTGGTGCCATTG...ATTGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp GGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGCACAATGGCACCAGCATTaGCCATGGGGTTATGGGGGA +
Preference number: 4 (lower is better)
Translates to: GRACCSAGHLALCPQTCAQWHQH*PWGYGG
Trigger: TCCCCCATAACCCCATGGTCAATGCTGGTGCCATTG...TGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR TCA 90 bp CGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGTGCCTGATTCACAAGTaGCCTCCACAGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: RISAPSRRGSNFRAQCLRCLIHK*PPQNTA
Trigger: AGCTGTGTTCTGTGGAGGTCACTTGTGAATCAGGCA...CCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp GAATGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCTTGTCCAATGGGGGTaGCAGGCACATCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: ECMRLRVLRTASALSTLSLVQWG*QAHHSH
Trigger: ATGGGAATGATGTGCCTGTCACCCCCATTGGACAAG...CGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp AGAGACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGCTTGTCCAATGGGGGTaGCAGGCACATCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: RDTNFWQKLVPLWLFPSLLVQWG*QAHHSH
Trigger: ATGGGAATGATGTGCCTGTCACCCCCATTGGACAAG...CAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp ATGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCAAACCTTCGAAGAGCTaGGACATCGCCACTATAGGC +
Preference number: 4 (lower is better)
Translates to: MHEAEGVAHCFSTQHTLAKPSKS*DIATIG
Trigger: GCCTATAGTGGCGATGTCTCAGCTCTTCGAAGGTTT...GGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp GGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACTTTCGGAAGAGATAGGACAGGGGCTAGGTaGGGAGCGTTGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: GMPGSGAQCCCSHTFGRDRTGAR*GALGMK
Trigger: CTTCATCCCCAACGCTCCTCACCTAGCCCCTGTCCT...ATCTCTTCCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR TCA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTAGGACAGGGGCTAGGTaGGGAGCGTTGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSRTGAR*GALGMK
Trigger: CTTCATCCCCAACGCTCCTCACCTAGCCCCTGTCCT...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGGATGTAGGCTGCCACTaGTCCTGGTGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VARVPPPEYLSHDGFFREDVGCH*SWCCGW
Trigger: CCAGCCGCAGCACCAGGATCAGTGGCAGCCTACATC...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610413.4
CDS-3UTR GCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGCGGCTCAGGGCCTTCTaGAGAGCCTTCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: VARVPPPEYLSHDGFFRERLRAF*RAFMER
Trigger: GCGCTCCATGAAGGCTCTGCAGAAGGCCCTGAGCCG...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp ACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGGAAGAGCTCGCCCGCAGTGACTaGCAGCCCGGCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: THVFIPSHFVEILQHLEELARSD*QPGSGP
Trigger: AGGCCCTGAGCCGGGCTGGCAGTCACTGCGGGCGAG...CTCTTCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR GCA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTGCCTCACTGAGGTGGTaGCGGACGCCCCCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: WGILTPIESTSLSHQMTAASLRW*RTPPPR
Trigger: CCTTGGCGGGGGCGTCCGGCACCACCTCAGTGAGGC...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCGCCTCACTGAGGTGGTaGCGGACGCCCCCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSASLRW*RTPPPR
Trigger: CCTTGGCGGGGGCGTCCGGCACCACCTCAGTGAGGC...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGCATCTTGGACCACGCGGTaGATCTCGCTCATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GRACCSAGHLALCPQTCASWTTR*ISLMQS
Trigger: AGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGA...TGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486896.5
CDS-3UTR GCA 90 bp ATGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTGTGCACGTAGTCAGTaGCTAGGGTGCTTATGGAGA +
Preference number: 4 (lower is better)
Translates to: MHEAEGVAHCFSTQHTLACARSQ*LGCLWR
Trigger: TCTCCATAAGCACCCTAGGCACTGACTACGTGCACA...GGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp CATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACTTGGCTGGCAGGCTGTGCACGTAGTCAGTaGCTAGGGTGCTTATGGAGA +
Preference number: 4 (lower is better)
Translates to: HWVPPGGWLLIQLTWLAGCARSQ*LGCLWR
Trigger: TCTCCATAAGCACCCTAGGCACTGACTACGTGCACA...GCCTGCCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp TTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCGAGGGTGTTGCGCACTaGTTCAGCACTCAGCACACT +
Preference number: 4 (lower is better)
Translates to: LFRISAPSRRGSNFRAQCEGVAH*FSTQHT
Trigger: AGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTC...GCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp TTGAAGAGAGACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCCTTGTTCCGAATTTCTaGCCCTTCACGCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LKRDTNFWQKLVPLWLFPLVPNF*PFTPWV
Trigger: GACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAG...GGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGTCTCTCTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp ATGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTCCAGATGGTTGAACTaGACAGCATCATCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: MHEAEGVAHCFSTQHTLASRWLN*TASSRG
Trigger: TCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGA...GGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp ATTGAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGCAGGAGAAGGGGCCTaGCCCTTTAAAGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: IEGELVVAQATWLFAHKLAGEGA*PFKAGS
Trigger: GGAGCCAGCTTTAAAGGGGCAGGCCCCTTCTCCTGC...AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494474.5
CDS-3UTR CCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATACGGCTGGTGGCTGTGTaGCGTCTCTCTGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIRLVAV*RLSALR
Trigger: GCGCAGGGCAGAGAGACGCCACACAGCCACCAGCCG...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GCGAAATGCAGCCAGGGGCTAAGTAGCAAGGGAACTTACAAAATCAAACTTCTCCGGCTGGTGGCTGTGTaGCGTCTCTCTGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: AKCSQGLSSKGTYKIKLLRLVAV*RLSALR
Trigger: GCGCAGGGCAGAGAGACGCCACACAGCCACCAGCCG...GAGAAGTTTGATTTTGTAAGTTCCCTTGCTACTTAGCCCCTGGCTGCATTTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGTCCTGGTGCTGCGGCTaGTGGCTGTGTGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: VARVPPPEYLSHDGFFRESWCCG*WLCGVS
Trigger: AGAGACGCCACACAGCCACCAGCCGCAGCACCAGGA...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGAACACAGCTGGAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGCCACTACTGGACTCTTaGACCACGCGGTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: RTQLEVEIKGSHHVHPLRPLLDS*TTRCIS
Trigger: CGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGG...CCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTCCAGCTGTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
CDS-3UTR CCA 90 bp ACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGGCTGGCAGGCCCACGTaGAAGGCAAACTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TPIESTSLSHQMTAWSPLAGRPT*KANWPE
Trigger: CTCTGGCCAGTTTGCCTTCCACGTGGGCCTGCCAGC...CAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGTGTACCACCAGGAGGATaGCTCCTGATACAGCTGACT +
Preference number: 4 (lower is better)
Translates to: EFLPLHAVGLTSEHSASGVPPGG*LLIQLT
Trigger: AGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTAC...ACCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp GTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGACTTCTGGCAGAAGCTaGTCCCCCTATGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VLFRISAPSRRGSNFRAQTSGRS*SPYGCS
Trigger: GGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGT...CTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp GACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCAACCTGGGTGAAGAGCTaGGATGGTTTTGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DHLQMVELHSIIQGNVAPTWVKS*DGFEWG
Trigger: GCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGT...TGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CTCCTCAAAATCAGGAATGACAAACTTCTTTCGGAATGCCTGGGTCAGGAGCACGGAAGACGGAGAATGTaGGCCCGGTGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLKIRNDKLLSECLGQEHGRRRM*ARWVGL
Trigger: CAGCCCCACCCACCGGGCCCACATTCTCCGTCTTCC...GTGCTCCTGACCCAGGCATTCCGAAAGAAGTTTGTCATTCCTGATTTTGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp TTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGTCTGTGAGGGAGCGCTaGACCTGGAAGACGGAGAAT +
Preference number: 4 (lower is better)
Translates to: FRKRSRSKRPPLLDSWTTSVRER*TWKTEN
Trigger: ATTCTCCGTCTTCCAGGTCCAGCGCTCCCTCACAGA...CGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp AGAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCAATGTCTGCAGTCCAGTaGCCTTTAGTGCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: RDLGPRGHHYWTLGPRGAMSAVQ*PLVLIL
Trigger: CAGGATCAGCACTAAAGGCCACTGGACTGCAGACAT...TGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR TCA 90 bp GCACTCAGCACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGCCTCAAAATCAGGAATaGCAAACTTCTTTCGGAATG +
Preference number: 4 (lower is better)
Translates to: ALSTLSPVMGQIPPLARVPQNQE*QTSFGM
Trigger: CATTCCGAAAGAAGTTTGTCATTCCTGATTTTGAGG...CACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGCTGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp ACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCAGATCCACATGGCCCGTaGACTCCTCAAAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: TPTSGRSWSPYGCSPACPDPHGP*TPQNQE
Trigger: TTCCTGATTTTGAGGAGTTCACGGGCCATGTGGATC...TGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp AGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTTCCTTGCCCACAGAGTGCCGTTaGCCATCCACAGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: RSRAAIMSTPLGKHFFSLPTECR*PSTVHR
Trigger: CCTGTGCACTGTGGATGGTCAACGGCACTCTGTGGG...CAAGGAAAAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
ENST00000494474.5
CDS-3UTR TCA 90 bp AGAGACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTGCCTGATTCACAAGTaGCCTCCACAGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: RDTNFWQKLVPLWLFPSLCLIHK*PPQNTA
Trigger: AGCTGTGTTCTGTGGAGGTCACTTGTGAATCAGGCA...CAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACGCACACTCTCGCCTGTaGTGGGGCAGATCCCACCGT +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHAHSRL*WGRSHR
Trigger: ACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGC...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCGCACACTCTCGCCTGTaGTGGGGCAGATCCCACCGT +
Preference number: 4 (lower is better)
Translates to: VLAKGSRFLQTTKAMYIAAHSRL*WGRSHR
Trigger: ACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGC...GGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACCTGTCCTTGGCAGGCACATCATTCCCATaGCATTGGGTACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: WLNCTASSRGMLPHLSLAGTSFP*HWVPPG
Trigger: TCCTGGTGGTACCCAATGTCATGGGAATGATGTGCC...TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp TACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCGGCACATCATTCCCATaGCATTGGGTACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: YLEAQSLWIAVLQVSSEAGTSFP*HWVPPG
Trigger: TCCTGGTGGTACCCAATGTCATGGGAATGATGTGCC...GGCCTCAGAGGACACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTCAAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCCTTGTCCAATGGGGGTaGCAGGCACATCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: YLEAQSLWIAVLQVSSEALVQWG*QAHHSH
Trigger: ATGGGAATGATGTGCCTGTCACCCCCATTGGACAAG...GGCCTCAGAGGACACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTCAAGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACCTGTCCTTGGCACCACCTCCAGATGGTTaGACTGCACAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: WLNCTASSRGMLPHLSLAPPPDG*TAQHHP
Trigger: TGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGG...TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp AATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGAGCTGGGATGGTTTTaGGTGGGGCAAGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: NGGDRHIIPMTLGTTRRMELGWF*VGQAIR
Trigger: CCTAATGGCTTGCCCCACTCAAAACCATCCCAGCTC...CATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATTGCGGGGGAGTTCTGTaGGGGAGCGCTGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDCGGVL*GSAGPG
Trigger: TCCAGGTCCAGCGCTCCCTCACAGAACTCCCCCGCA...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTCCTCAAAATCAGGAATGACAAACTTCTTTCGGAATGCCTGGGTCAGGAGCACGAGGAGCGTTGGGGATaGAGGAGAACCCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LLKIRNDKLLSECLGQEHEERWG*RRTRVA
Trigger: AGCCACCCGGGTTCTCCTTCATCCCCAACGCTCCTC...GTGCTCCTGACCCAGGCATTCCGAAAGAAGTTTGTCATTCCTGATTTTGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTGCAAGCCTCCGGCTCTaGAGGTGCGCCCGGGACCTC +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTASLRL*RCARDL
Trigger: GAGGTCCCGGGCGCACCTGCAGAGCCGGAGGCTTGC...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCCGGCTCAGGGCCTTCTaGAGAGCCTTCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: VLAKGSRFLQTTKAMYIARLRAF*RAFMER
Trigger: GCGCTCCATGAAGGCTCTGCAGAAGGCCCTGAGCCG...GGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGCGGCTCAGGGCCTTCTaGAGAGCCTTCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQRLRAF*RAFMER
Trigger: GCGCTCCATGAAGGCTCTGCAGAAGGCCCTGAGCCG...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGTCGAGGATCTGATGTCTaGAGTCCAGTGGCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: EFLPLHAVGLTSEHSASGRGSDV*SPVAFS
Trigger: ACTAAAGGCCACTGGACTGCAGACATCAGATCCTCG...ACCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp AATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGATGTCTTGGACCACGCGGTaGATCTCGCTCATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: NGGDRHIIPMTLGTTRRMSWTTR*ISLMQS
Trigger: AGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGA...CATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp AGAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATCAGGAGCACAATGTTaGTGCTCACACACTTTCGGA +
Preference number: 4 (lower is better)
Translates to: RDLGPRGHHYWTLGPRGASGAQC*CSHTFG
Trigger: TCCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGA...TGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp CCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCAATGAGTCAGTGCCTAGGGTaGTTATGGAGATGGCATAGG +
Preference number: 4 (lower is better)
Translates to: PTSGRSWSPYGCSPACPMSQCLG*LWRWHR
Trigger: CCTATGCCATCTCCATAAGCACCCTAGGCACTGACT...CATTGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp CTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACGCAGGAGAAGGGGCCTaGCCCTTTAAAGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LHQSISLMMVSSGRGRGDAGEGA*PFKAGS
Trigger: GGAGCCAGCTTTAAAGGGGCAGGCCCCTTCTCCTGC...GTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTGGGTCTGCAGAGCCTTCATaGAGCGCATGCCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PEYLSHDGFFRERKRRPGSAEPS*SACPSK
Trigger: CTTGCTGGGGCATGCGCTCCATGAAGGCTCTGCAGA...CCCAGGTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AATGTTGCTGCTCACACACTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTTCTGCAGAGCCTTCATaGAGCGCATGCCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: NVAAHTLSEEISVQEATTSAEPS*SACPSK
Trigger: CTTGCTGGGGCATGCGCTCCATGAAGGCTCTGCAGA...AGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAGTGTGTGAGCAGCAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCGGCTGGTGGCTGTGTaGCGTCTCTCTGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSRLVAV*RLSALR
Trigger: GCGCAGGGCAGAGAGACGCCACACAGCCACCAGCCG...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTATGGTGCTGCGGCTGGTaGCTGTGTGGCGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LCLLREWGILTPIESTSLWCCGW*LCGVSL
Trigger: CAGAGAGACGCCACACAGCCACCAGCCGCAGCACCA...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTATCCTGGTGCTGCGGCTaGTGGCTGTGTGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVSWCCG*WLCGVS
Trigger: AGAGACGCCACACAGCCACCAGCCGCAGCACCAGGA...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTTCCTGGTGCTGCGGCTaGTGGCTGTGTGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSSWCCG*WLCGVS
Trigger: AGAGACGCCACACAGCCACCAGCCGCAGCACCAGGA...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTGGGCCACTACTGGACTCTTaGACCACGCGGTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: PEYLSHDGFFRERKRRPGPLLDS*TTRCIS
Trigger: CGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGG...CCCAGGTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CCA 90 bp TTTCGGAATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACTTTCGGAAGAGAGGCCACCACTACTaGACTCTTGGACCACGCGGT +
Preference number: 4 (lower is better)
Translates to: FRNAWVRSTMLLLTHFRKRGHHY*TLGPRG
Trigger: ACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCT...CTTCCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp TCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATCTCGCTCATGTTCTTTCGGAATGCCTaGGTCAGGAGCACAATGTTG +
Preference number: 4 (lower is better)
Translates to: SKRPPLLDSWTTRCISLMFFRNA*VRSTML
Trigger: CAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAA...CATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp ATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATCTCAAGATGCGATCCACATaGCCCGTGAACTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: ISVQEATTTGLLDHAVHLKMRST*PVNSSK
Trigger: TTTTGAGGAGTTCACGGGCCATGTGGATCGCATCTT...GAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CCA 90 bp ACAGTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCAGGTCTGGGTTTGACTTaGCCAGCTGAGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: TVLFRISAPSRRGSNFRAGLGLT*PAEGCR
Trigger: CCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACC...TGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCGCTGGCAGGCCCACGTaGAAGGCAAACTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFAGRPT*KANWPE
Trigger: CTCTGGCCAGTTTGCCTTCCACGTGGGCCTGCCAGC...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTGGGCTGATACAGCTGACTTaGCTGGCAGGCCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: PEYLSHDGFFRERKRRPGLIQLT*LAGPRG
Trigger: TCCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAG...CCCAGGTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTCTGATACAGCTGACTTaGCTGGCAGGCCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSLIQLT*LAGPRG
Trigger: TCCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAG...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GCACTCAGCACACTCTCGCCTGTGATGGGGCAGATCCCACCGTTGGCGAGGGTGTATTTTTGGTGGTTATaGATTACATGTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ALSTLSPVMGQIPPLARVYFWWL*ITCVAS
Trigger: GCTGGCCACACATGTAATCCATAACCACCAAAAATA...CACCCTCGCCAACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGCTGAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp ACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACTTGGCTGGCAGGTGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TLGTTRRMAPDTADLAGRWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...CCTGCCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp ACAGTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCAACCTGGGTGAAGAGCTaGGATGGTTTTGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TVLFRISAPSRRGSNFRATWVKS*DGFEWG
Trigger: GCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGT...TGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCAGGAAGACGGAGAATGTaGGCCCGGTGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPGRRRM*ARWVGL
Trigger: CAGCCCCACCCACCGGGCCCACATTCTCCGTCTTCC...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTTCCTTGAGGGAGCGCTGGACCTaGAAGACGGAGAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: RSRAAIMSTPLGKHFFSLRERWT*KTENVG
Trigger: GCCCACATTCTCCGTCTTCCAGGTCCAGCGCTCCCT...CAAGGAAAAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000494474.5
CDS-3UTR CCA 90 bp CTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAAGGGAGCGCTGGACCTaGAAGACGGAGAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSIKLAVSSSSSMSWPRGRERWT*KTENVG
Trigger: GCCCACATTCTCCGTCTTCCAGGTCCAGCGCTCCCT...TCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTGCCTCCAGTGAGCTCTTTGACATCCTCAAAGATGCGATCCACATGGCCCGTGGAAGGAGAACCCGGGTaGCTTTCTAGTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LPPVSSLTSSKMRSTWPVEGEPG*LSSGWR
Trigger: TCTCCACCCACTAGAAAGCCACCCGGGTTCTCCTTC...CACGGGCCATGTGGATCGCATCTTTGAGGATGTCAAAGAGCTCACTGGAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR TCA 90 bp ATAAGGCTTCTAGTATGGGCTGGTGCACCTGGTAGTGGGGTTAGAGAGCCACTGCTTTCTGATGAATCATaGTCCTGGTGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: IRLLVWAGAPGSGVREPLLSDES*SWCCGW
Trigger: CCAGCCGCAGCACCAGGATCATGATTCATCAGAAAG...CAGTGGCTCTCTAACCCCACTACCAGGTGCACCAGCCCATACTAGAAGCCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR TCA 90 bp GTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCCCACAGAGTGCCGTTaGCCATCCACAGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: VLCLLREWGILTPIESTSPTECR*PSTVHR
Trigger: CCTGTGCACTGTGGATGGTCAACGGCACTCTGTGGG...GCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGCCCACAGAGTGCCGTTaGCCATCCACAGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: LQSILIRELTTMAPALTMPTECR*PSTVHR
Trigger: CCTGTGCACTGTGGATGGTCAACGGCACTCTGTGGG...CATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR TCA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGCACACTCTCGCCTGTaGTGGGGCAGATCCCACCGT +
Preference number: 4 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDAHSRL*WGRSHR
Trigger: ACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGC...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGCACACTCTCGCCTGTaGTGGGGCAGATCCCACCGT +
Preference number: 4 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPAHSRL*WGRSHR
Trigger: ACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGC...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACCTGTCCTTGGCAAAACCTTCGAAGAGCTaGGACATCGCCACTATAGGC +
Preference number: 4 (lower is better)
Translates to: WLNCTASSRGMLPHLSLAKPSKS*DIATIG
Trigger: GCCTATAGTGGCGATGTCTCAGCTCTTCGAAGGTTT...TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGAAGCAGTGGCATTGCTaGAACCCATGTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: RISAPSRRGSNFRAQCLRKQWHC*NPCIHS
Trigger: GGAATGAATACATGGGTTTCAGCAATGCCACTGCTT...CCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479952.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CAAGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACAGAGGAGCGTTGGGGATaGAGGAGAACCCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QASIRNLTTSMCPSAAATEERWG*RRTRVA
Trigger: AGCCACCCGGGTTCTCCTTCATCCCCAACGCTCCTC...TGTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486433.5
CDS-3UTR TCA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCAGGACAGGGGCTAGGTaGGGAGCGTTGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFRTGAR*GALGMK
Trigger: CTTCATCCCCAACGCTCCTCACCTAGCCCCTGTCCT...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATACCTTCATGGAGCGCATaGCCCAGCAAGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIPSWSA*PSKPPA
Trigger: AGCCGGAGGCTTGCTGGGGCATGCGCTCCATGAAGG...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCTTCATGGAGCGCATaGCCCAGCAAGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPPSWSA*PSKPPA
Trigger: AGCCGGAGGCTTGCTGGGGCATGCGCTCCATGAAGG...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCACCTTCATGGAGCGCATaGCCCAGCAAGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPPSWSA*PSKPPA
Trigger: AGCCGGAGGCTTGCTGGGGCATGCGCTCCATGAAGG...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTTCGAAGAGCTGAGACGGCTCAGGGCCTTCTaGAGAGCCTTCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SLSVPYPWLTRQTFEELRRLRAF*RAFMER
Trigger: GCGCTCCATGAAGGCTCTGCAGAAGGCCCTGAGCCG...TCTCAGCTCTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAACAGAAAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
CDS-3UTR GCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATACTCGCCCGCAGTGACTaGCAGCCCGGCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QTTKAMYIAIPTSHILWILARSD*QPGSGP
Trigger: AGGCCCTGAGCCGGGCTGGCAGTCACTGCGGGCGAG...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACCGAGGATCTGATGTCTaGAGTCCAGTGGCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: LSEEISVQEATTTGLLDHRGSDV*SPVAFS
Trigger: ACTAAAGGCCACTGGACTGCAGACATCAGATCCTCG...GTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGAGGTGCATCTCGCTCATaGAGTCTCGGAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRGASRS*SLGAED
Trigger: ATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACC...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp ATGCCTGGGTCAGGAGCACAATGTTGCTGCTCACACACTTTCGGAAGAGATCTCTCTTGGACCACGCGGTaGATCTCGCTCATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: MPGSGAQCCCSHTFGRDLSWTTR*ISLMQS
Trigger: AGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGA...GAGATCTCTTCCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp GAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATAAACTTCTTTCGGAATaGCTGGGTCAGGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: EISVQEATTTGLLDHAVHKLLSE*LGQEHN
Trigger: ATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTTT...ATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp TGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTAAACTTCTTTCGGAATaGCTGGGTCAGGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: CMRLRVLRTASALSTLSPKLLSE*LGQEHN
Trigger: ATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTTT...AGGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp AGAACACAGCTGGAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGGGCTTCACACAGGACTaGAGGCAGAAGGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: RTQLEVEIKGSHHVHPLRGFTQD*RQKGIF
Trigger: AAAGATCCCCTTCTGCCTGCAGTCCTGTGTGAAGCC...CCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTCCAGCTGTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
CDS-3UTR GCA 90 bp AGAACACAGCTGGAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGGGCCACTTGGCTCTTTaGCCACAAACTTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: RTQLEVEIKGSHHVHPLRGHLAL*PQTCAR
Trigger: ACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCC...CCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTCCAGCTGTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
CDS-3UTR GCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTACTTGTTCCGAATTTCTaGCCCTTCACGCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLLVPNF*PFTPWV
Trigger: GACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAG...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCAATGCAACATGCAGAGCTGTaGGCGAGTCATAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PTSGRSWSPYGCSPACPMQHAEL*ASHSLS
Trigger: AGAAAGACTATGACTCGCGCACAGCTCTGCATGTTG...CATTGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTTCAGCTGCAGCAACATaGAGAGCTGTGCGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSSAAAT*RAVRES
Trigger: TGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTGA...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGCATCCAGGGGAATGTTaGCCCACCTGTCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LALCPQTCARSQCLGCLWHPGEC*PTCPWQ
Trigger: TTGCCAAGGACAGGTGGGGCAACATTCCCCTGGATG...CCATAAGCACCCTAGGCACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424141.6
CDS-3UTR GCA 90 bp TTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCTCCAGATGGTTGAACTaGACAGCATCATCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LFRISAPSRRGSNFRAQCSRWLN*TASSRG
Trigger: TCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGA...GCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp CTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGACAGGGCCTCAGCTGCTaGCTCAGCCTGAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSIKLAVSSSSSMSWPRGQGLSC*LSLSFR
Trigger: TCTGAAACTCAGGCTGAGGCAGCAGCTGAGGCCCTG...TCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGCAGGGCCTCAGCTGCTaGCTCAGCCTGAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: VARVPPPEYLSHDGFFREQGLSC*LSLSFR
Trigger: TCTGAAACTCAGGCTGAGGCAGCAGCTGAGGCCCTG...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCAATGAAGTCACCAAATGACTaGTTGGTCCCCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PTSGRSWSPYGCSPACPMKSPND*LVPTEA
Trigger: TGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTT...CATTGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp GAAATAAGGCTTCTAGTATGGGCTGGTGCACCTGGTAGTGGGGTTAGAGAGCCACATGCCATGGCGAAATaGAGCCAGGGGCTAAGTAGC +
Preference number: 4 (lower is better)
Translates to: EIRLLVWAGAPGSGVREPHAMAK*SQGLSS
Trigger: GCTACTTAGCCCCTGGCTGCATTTCGCCATGGCATG...TGGCTCTCTAACCCCACTACCAGGTGCACCAGCCCATACTAGAAGCCTTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTGCGGCCTCACTGAGGTaGTGCCGGACGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIAASLR*CRTPPP
Trigger: TGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGC...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GCGAAATGCAGCCAGGGGCTAAGTAGCAAGGGAACTTACAAAATCAAACTTCTCTGGTGCTGCGGCTGGTaGCTGTGTGGCGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: AKCSQGLSSKGTYKIKLLWCCGW*LCGVSL
Trigger: CAGAGAGACGCCACACAGCCACCAGCCGCAGCACCA...GAGAAGTTTGATTTTGTAAGTTCCCTTGCTACTTAGCCCCTGGCTGCATTTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CCA 90 bp AGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACATGTCCTGGTGCTGCGGCTaGTGGCTGTGTGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: SLDQEFNNFDVSFSCSNMSWCCG*WLCGVS
Trigger: AGAGACGCCACACAGCCACCAGCCGCAGCACCAGGA...CATGTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
CDS-3UTR CCA 90 bp CTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGACCACTACTGGACTCTTaGACCACGCGGTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: LESLHQSISLMMVSSGRGPLLDS*TTRCIS
Trigger: CGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGG...TCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CCA 90 bp CCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTGGGGGTCTGGGTTTGACTTaGCCAGCTGAGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: PEYLSHDGFFRERKRRPGGLGLT*PAEGCR
Trigger: CCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACC...CCCAGGTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ATTGAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGGTCTGGGTTTGACTTaGCCAGCTGAGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: IEGELVVAQATWLFAHKLGLGLT*PAEGCR
Trigger: CCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACC...AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CCA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCGTAGCGCAGGCCACTTaGCTCTTTGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSVAQAT*LFAHKL
Trigger: AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTAC...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTGCTGGCAGGCCCACGTaGAAGGCAAACTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPAGRPT*KANWPE
Trigger: CTCTGGCCAGTTTGCCTTCCACGTGGGCCTGCCAGC...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCGTACCACCAGGAGGATaGCTCCTGATACAGCTGACT +
Preference number: 4 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSVPPGG*LLIQLT
Trigger: AGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTAC...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGAAGCTGGTCCCCCTATaGCTGTTCCCCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SLTTSRWLNCTASSRGMLKLVPL*LFPSLS
Trigger: GGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTT...CAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp AGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTTCCTTGAAGCTGGTCCCCCTATaGCTGTTCCCCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RSRAAIMSTPLGKHFFSLKLVPL*LFPSLS
Trigger: GGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTT...CAAGGAAAAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486433.5
CDS-3UTR CCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAACCTGGGTGAAGAGCTaGGATGGTTTTGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLTWVKS*DGFEWG
Trigger: GCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGT...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GTGCTCATACCATGCTTTCTAAGTTCTCTTTGGACAGGGCCTCAGCTGCTGCCTACCTGGGTGAAGAGCTaGGATGGTTTTGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VLIPCFLSSLWTGPQLLPTWVKS*DGFEWG
Trigger: GCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGT...AGGCAGCAGCTGAGGCCCTGTCCAAAGAGAACTTAGAAAGCATGGTATGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp AATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGATGAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTC +
Preference number: 4 (lower is better)
Translates to: NGGDRHIIPMTLGTTRRMSSSMS*PRGVDF
Trigger: GAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCT...CATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp GCACTTCTTTTCCTTGAGATAATAGCCGATGGCATAATTCCGATCCCCTGTTTCGGAAGACGGAGAATGTaGGCCCGGTGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALLFLEIIADGIIPIPCFGRRRM*ARWVGL
Trigger: CAGCCCCACCCACCGGGCCCACATTCTCCGTCTTCC...GAAACAGGGGATCGGAATTATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000494474.5
CDS-3UTR CCA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTTCTGTGAGGGAGCGCTaGACCTGGAAGACGGAGAAT +
Preference number: 4 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSSVRER*TWKTEN
Trigger: ATTCTCCGTCTTCCAGGTCCAGCGCTCCCTCACAGA...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GAAATAAGGCTTCTAGTATGGGCTGGTGCACCTGGTAGTGGGGTTAGAGAGCCATCTGTGAGGGAGCGCTaGACCTGGAAGACGGAGAAT +
Preference number: 4 (lower is better)
Translates to: EIRLLVWAGAPGSGVREPSVRER*TWKTEN
Trigger: ATTCTCCGTCTTCCAGGTCCAGCGCTCCCTCACAGA...TGGCTCTCTAACCCCACTACCAGGTGCACCAGCCCATACTAGAAGCCTTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAACCTCTAGCTGTGGCTaGGAAGGAGGGGCGGAGCGA +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQTSSCG*EGGAER
Trigger: TCGCTCCGCCCCTCCTTCCCAGCCACAGCTAGAGGT...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATAACCTCTAGCTGTGGCTaGGAAGGAGGGGCGGAGCGA +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCITSSCG*EGGAER
Trigger: TCGCTCCGCCCCTCCTTCCCAGCCACAGCTAGAGGT...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATTCGGAGCCGAGGATCTaGTGTCTGCAGTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: DMYMCMVARVPPPEYLSHSEPRI*CLQSSG
Trigger: GCCACTGGACTGCAGACATCAGATCCTCGGCTCCGA...ATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR TCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCATCGGAGCCGAGGATCTaGTGTCTGCAGTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPSEPRI*CLQSSG
Trigger: GCCACTGGACTGCAGACATCAGATCCTCGGCTCCGA...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR TCA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCCACAGGTCTGGGTTTaGCTTGGCCAGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSPQVWV*LGQLRD
Trigger: ATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGG...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGCCACAGGTCTGGGTTTaGCTTGGCCAGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LQSILIRELTTMAPALTMPQVWV*LGQLRD
Trigger: ATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGG...CATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR TCA 90 bp GTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCCACAGGTCTGGGTTTaGCTTGGCCAGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: VLCLLREWGILTPIESTSPQVWV*LGQLRD
Trigger: ATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGG...GCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATACCCACAGAGTGCCGTTaGCCATCCACAGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIPTECR*PSTVHR
Trigger: CCTGTGCACTGTGGATGGTCAACGGCACTCTGTGGG...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GCGAAATGCAGCCAGGGGCTAAGTAGCAAGGGAACTTACAAAATCAAACTTCTCCCCACAGAGTGCCGTTaGCCATCCACAGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: AKCSQGLSSKGTYKIKLLPTECR*PSTVHR
Trigger: CCTGTGCACTGTGGATGGTCAACGGCACTCTGTGGG...GAGAAGTTTGATTTTGTAAGTTCCCTTGCTACTTAGCCCCTGGCTGCATTTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR TCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGTGGAGATGGCATAGGTaGGGGGCTTCACACAGGACT +
Preference number: 4 (lower is better)
Translates to: VARVPPPEYLSHDGFFREWRWHR*GASHRT
Trigger: AGTCCTGTGTGAAGCCCCTCACCTATGCCATCTCCA...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTGCACACTCTCGCCTGTaGTGGGGCAGATCCCACCGT +
Preference number: 4 (lower is better)
Translates to: WGILTPIESTSLSHQMTAAHSRL*WGRSHR
Trigger: ACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGC...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGATGAAACCTTCGAAGAGCTaGGACATCGCCACTATAGGC +
Preference number: 4 (lower is better)
Translates to: NGGDRHIIPMTLGTTRRMKPSKS*DIATIG
Trigger: GCCTATAGTGGCGATGTCTCAGCTCTTCGAAGGTTT...CATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTGGGCCACCTCCAGATGGTTaGACTGCACAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: PEYLSHDGFFRERKRRPGPPPDG*TAQHHP
Trigger: TGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGG...CCCAGGTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTACCACCTCCAGATGGTTaGACTGCACAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLPPPDG*TAQHHP
Trigger: TGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGG...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGAC +
Preference number: 4 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSAHAFS*AGAVHD
Trigger: GTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGC...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTTGCGGGGGAGTTCTGTaGGGGAGCGCTGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVACGGVL*GSAGPG
Trigger: TCCAGGTCCAGCGCTCCCTCACAGAACTCCCCCGCA...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTGAGGAGCGTTGGGGATaGAGGAGAACCCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: WGILTPIESTSLSHQMTAEERWG*RRTRVA
Trigger: AGCCACCCGGGTTCTCCTTCATCCCCAACGCTCCTC...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGGAGGAGCGTTGGGGATaGAGGAGAACCCGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GILTPIESTSLSHQMTAWEERWG*RRTRVA
Trigger: AGCCACCCGGGTTCTCCTTCATCCCCAACGCTCCTC...CCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCGGCTCAGGGCCTTCTaGAGAGCCTTCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYRLRAF*RAFMER
Trigger: GCGCTCCATGAAGGCTCTGCAGAAGGCCCTGAGCCG...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GCACTTCTTTTCCTTGAGATAATAGCCGATGGCATAATTCCGATCCCCTGTTTCCGGCTCAGGGCCTTCTaGAGAGCCTTCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: ALLFLEIIADGIIPIPCFRLRAF*RAFMER
Trigger: GCGCTCCATGAAGGCTCTGCAGAAGGCCCTGAGCCG...GAAACAGGGGATCGGAATTATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
ENST00000494474.5
CDS-3UTR GCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTCGCCCGCAGTGACTaGCAGCCCGGCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHILARSD*QPGSGP
Trigger: AGGCCCTGAGCCGGGCTGGCAGTCACTGCGGGCGAG...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCCGAGGATCTGATGTCTaGAGTCCAGTGGCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSRGSDV*SPVAFS
Trigger: ACTAAAGGCCACTGGACTGCAGACATCAGATCCTCG...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp ACAGTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACGAGGATCTGATGTCTaGAGTCCAGTGGCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: TVLFRISAPSRRGSNFRARGSDV*SPVAFS
Trigger: ACTAAAGGCCACTGGACTGCAGACATCAGATCCTCG...TGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp TCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCGGTGCATCTCGCTCATaGAGTCTCGGAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: SVDMYMCMVARVPPPEYLGASRS*SLGAED
Trigger: ATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACC...GAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp AGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTTCCTTGTCTTGGACCACGCGGTaGATCTCGCTCATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RSRAAIMSTPLGKHFFSLSWTTR*ISLMQS
Trigger: AGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGA...CAAGGAAAAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
CDS-3UTR GCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGTCTTGGACCACGCGGTaGATCTCGCTCATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: VARVPPPEYLSHDGFFRESWTTR*ISLMQS
Trigger: AGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGA...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp ACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACTTGGCTGGCAGGAAACTTCTTTCGGAATaGCTGGGTCAGGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: TLGTTRRMAPDTADLAGRKLLSE*LGQEHN
Trigger: ATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTTT...CCTGCCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp ATTGAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGGCTTCACACAGGACTaGAGGCAGAAGGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: IEGELVVAQATWLFAHKLGFTQD*RQKGIF
Trigger: AAAGATCCCCTTCTGCCTGCAGTCCTGTGTGAAGCC...AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR GCA 90 bp CTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGAGGGTGTTGCGCACTaGTTCAGCACTCAGCACACT +
Preference number: 4 (lower is better)
Translates to: LSIKLAVSSSSSMSWPRGEGVAH*FSTQHT
Trigger: AGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTC...TCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGAGAGGGTGTTGCGCACTaGTTCAGCACTCAGCACACT +
Preference number: 4 (lower is better)
Translates to: PPPEYLSHDGFFRERKRREGVAH*FSTQHT
Trigger: AGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTC...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTATACATGCCGCAGGAATaGATGAGGCTGAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLYMPQE*MRLRVL
Trigger: CAACACCCTCAGCCTCATGCATTCCTGCGGCATGTA...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTGGGTACATGCCGCAGGAATaGATGAGGCTGAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PEYLSHDGFFRERKRRPGYMPQE*MRLRVL
Trigger: CAACACCCTCAGCCTCATGCATTCCTGCGGCATGTA...CCCAGGTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp ACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGTCAGCTGCAGCAACATaGAGAGCTGTGCGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: TPIESTSLSHQMTAWSPLSAAAT*RAVRES
Trigger: TGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTGA...CAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGCAGGGCCTCAGCTGCTaGCTCAGCCTGAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQQGLSC*LSLSFR
Trigger: TCTGAAACTCAGGCTGAGGCAGCAGCTGAGGCCCTG...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GCAAGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACCAGGGCCTCAGCTGCTaGCTCAGCCTGAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: ASLDQEFNNFDVSFSCSNQGLSC*LSLSFR
Trigger: TCTGAAACTCAGGCTGAGGCAGCAGCTGAGGCCCTG...GTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp AGAGACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RDTNFWQKLVPLWLFPSLVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...CAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp ACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCAGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: TPTSGRSWSPYGCSPACPVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...TGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGCAGGAGAAGGGGCCTaGCCCTTTAAAGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPAGEGA*PFKAGS
Trigger: GGAGCCAGCTTTAAAGGGGCAGGCCCCTTCTCCTGC...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTATCTGCAGAGCCTTCATaGAGCGCATGCCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVSAEPS*SACPSK
Trigger: CTTGCTGGGGCATGCGCTCCATGAAGGCTCTGCAGA...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCGCGGCCTCACTGAGGTaGTGCCGGACGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: VFIPSHFVEILQHKIKLLAASLR*CRTPPP
Trigger: TGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGC...GAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR CCA 90 bp ACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGGAAGAGTCCTGGTGCTGCGGCTaGTGGCTGTGTGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: THVFIPSHFVEILQHLEESWCCG*WLCGVS
Trigger: AGAGACGCCACACAGCCACCAGCCGCAGCACCAGGA...CTCTTCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CCA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCAGAGGCCACCACTACTaGACTCTTGGACCACGCGGT +
Preference number: 4 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFRGHHY*TLGPRG
Trigger: ACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCT...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CCA 90 bp TTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGAGAGGCCACCACTACTaGACTCTTGGACCACGCGGT +
Preference number: 4 (lower is better)
Translates to: LQSILIRELTTMAPALTMRGHHY*TLGPRG
Trigger: ACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCT...CATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486896.5
CDS-3UTR CCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAAGAGGCCACCACTACTaGACTCTTGGACCACGCGGT +
Preference number: 4 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVRGHHY*TLGPRG
Trigger: ACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCT...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CCA 90 bp AGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTTCCTTGGGTCTGGGTTTGACTTaGCCAGCTGAGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: RSRAAIMSTPLGKHFFSLGLGLT*PAEGCR
Trigger: CCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACC...CAAGGAAAAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CCA 90 bp TTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGGTAGCGCAGGCCACTTaGCTCTTTGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: LALCPQTCARSQCLGCLWVAQAT*LFAHKL
Trigger: AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTAC...CCATAAGCACCCTAGGCACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CCA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGGCTGGCAGGCCCACGTaGAAGGCAAACTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWAGRPT*KANWPE
Trigger: CTCTGGCCAGTTTGCCTTCCACGTGGGCCTGCCAGC...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACCTGATACAGCTGACTTaGCTGGCAGGCCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: LCTLSAEGMGYFDSHRKHLIQLT*LAGPRG
Trigger: TCCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAG...GTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCAAGCTGGTCCCCCTATaGCTGTTCCCCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFKLVPL*LFPSLS
Trigger: GGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTT...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCTTGACCACCTCCAGATaGTTGAACTGCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: YLEAQSLWIAVLQVSSEALTTSR*LNCTAS
Trigger: TGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAA...GGCCTCAGAGGACACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTCAAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTGAAGAGAGACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCTTGACCACCTCCAGATaGTTGAACTGCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: LKRDTNFWQKLVPLWLFPLTTSR*LNCTAS
Trigger: TGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAA...GGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGTCTCTCTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCTGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAACCTGGGTGAAGAGCTaGGATGGTTTTGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LESLHQSISLMMVSSGRGTWVKS*DGFEWG
Trigger: GCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGT...TCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATAGGGAGCGCTGGACCTaGAAGACGGAGAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDRERWT*KTENVG
Trigger: GCCCACATTCTCCGTCTTCCAGGTCCAGCGCTCCCT...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTTCCTTGTCTGTGAGGGAGCGCTaGACCTGGAAGACGGAGAAT +
Preference number: 4 (lower is better)
Translates to: RSRAAIMSTPLGKHFFSLSVRER*TWKTEN
Trigger: ATTCTCCGTCTTCCAGGTCCAGCGCTCCCTCACAGA...CAAGGAAAAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CCA 90 bp GCGAAATGCAGCCAGGGGCTAAGTAGCAAGGGAACTTACAAAATCAAACTTCTCGAGGACAGCATGCCATaGCGAAATGCAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: AKCSQGLSSKGTYKIKLLEDSMP*RNAARG
Trigger: GCCCCTGGCTGCATTTCGCCATGGCATGCTGTCCTC...GAGAAGTTTGATTTTGTAAGTTCCCTTGCTACTTAGCCCCTGGCTGCATTTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CCA 90 bp ACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGGAAGGAGAACCCGGGTaGCTTTCTAGTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: TPIESTSLSHQMTAWSPLEGEPG*LSSGWR
Trigger: TCTCCACCCACTAGAAAGCCACCCGGGTTCTCCTTC...CAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAACCACAGGTCTGGGTTTaGCTTGGCCAGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQPQVWV*LGQLRD
Trigger: ATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGG...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTACAATGGCACCAGCATTaGCCATGGGGTTATGGGGGA +
Preference number: 4 (lower is better)
Translates to: LCLLREWGILTPIESTSLQWHQH*PWGYGG
Trigger: TCCCCCATAACCCCATGGTCAATGCTGGTGCCATTG...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGGGAATGTGGCATTGCTaGAACCCATGTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: EGELVVAQATWLFAHKLVGMWHC*NPCIHS
Trigger: GGAATGAATACATGGGTTTCAGCAATGCCACATTCC...CACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR TCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTACCCTGTTTCCTTCTCTaGCTGGAATGTGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLPCFLL*LECGIA
Trigger: AGCAATGCCACATTCCAGTCAGAGAAGGAAACAGGG...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp ACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCAAGCACTTCTTTTCCTTaGGATAATAGCCGATGGCAT +
Preference number: 4 (lower is better)
Translates to: TPTSGRSWSPYGCSPACPSTSFP*DNSRWH
Trigger: ATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGCT...TGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486433.5
CDS-3UTR TCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTGCACACTCTCGCCTGTaGTGGGGCAGATCCCACCGT +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTAHSRL*WGRSHR
Trigger: ACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGC...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTGCACACTCTCGCCTGTaGTGGGGCAGATCCCACCGT +
Preference number: 4 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVAAHSRL*WGRSHR
Trigger: ACGGTGGGATCTGCCCCATCACAGGCGAGAGTGTGC...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp ATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGGGGTTATGGCTTGTCCAATGGGGGTaGCAGGCACATCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: ILIRELTTMAPALTMGLWLVQWG*QAHHSH
Trigger: ATGGGAATGATGTGCCTGTCACCCCCATTGGACAAG...CCATAACCCCATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424141.6
CDS-3UTR TCA 90 bp ATTGAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTAAACCTTCGAAGAGCTaGGACATCGCCACTATAGGC +
Preference number: 4 (lower is better)
Translates to: IEGELVVAQATWLFAHKLKPSKS*DIATIG
Trigger: GCCTATAGTGGCGATGTCTCAGCTCTTCGAAGGTTT...AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424141.6
CDS-3UTR TCA 90 bp CTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGACCACCTCCAGATGGTTaGACTGCACAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: LSIKLAVSSSSSMSWPRGPPPDG*TAQHHP
Trigger: TGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGG...TCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCACCTCCAGATGGTTaGACTGCACAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: SLTTSRWLNCTASSRGMLPPPDG*TAQHHP
Trigger: TGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGG...CAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGAGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGAC +
Preference number: 4 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRAHAFS*AGAVHD
Trigger: GTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGC...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCCTGCTTGGTCCCCACTaGAGCAGTGTAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SVDMYMCMVARVPPPEYLLLGPH*SSVALH
Trigger: ATGGAGAGCTACACTGCTTCAGTGGGGACCAAGCAG...GAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGGAGCTGGGATGGTTTTaGGTGGGGCAAGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQELGWF*VGQAIR
Trigger: CCTAATGGCTTGCCCCACTCAAAACCATCCCAGCTC...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCAGAGTATCTCTCTCATaGTGGTTTCTTCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: YLEAQSLWIAVLQVSSEARVSLS*WFLQGE
Trigger: CTCTCCCTGAAGAAACCATCATGAGAGAGATACTCT...GGCCTCAGAGGACACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTCAAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTATGGCTGTTCCCCAGCTTGTCCAATGGGGGTGACAGGCACATCATTCCCATGAGAGTATCTCTCTCATaGTGGTTTCTTCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LWLFPSLSNGGDRHIIPMRVSLS*WFLQGE
Trigger: CTCTCCCTGAAGAAACCATCATGAGAGAGATACTCT...CATGGGAATGATGTGCCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp TTGCTGAAACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACATGCGGGGGAGTTCTGTaGGGGAGCGCTGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: LLKPMYSFPAILLRYCNTCGGVL*GSAGPG
Trigger: TCCAGGTCCAGCGCTCCCTCACAGAACTCCCCCGCA...TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTTCAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000494474.5
CDS-3UTR TCA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCCTTCCGTGGCATTGCTaGAACCCATGTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSLPWHC*NPCIHS
Trigger: GGAATGAATACATGGGTTTCAGCAATGCCACGGAAG...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486433.5
CDS-3UTR TCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGGAAAGTGGGGCCTaGGAACTGCTACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPEESGA*ELLPAP
Trigger: AGGAGCAGGTAGCAGTTCTCAGGCCCCACTTTCCTC...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539272.5
CDS-3UTR GCA 90 bp GTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCGCCTCACTGAGGTGGTaGCGGACGCCCCCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: VFIPSHFVEILQHKIKLLASLRW*RTPPPR
Trigger: CCTTGGCGGGGGCGTCCGGCACCACCTCAGTGAGGC...GAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR GCA 90 bp TACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCAAACTTCTTTCGGAATaGCTGGGTCAGGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: YLEAQSLWIAVLQVSSEAKLLSE*LGQEHN
Trigger: ATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTTT...GGCCTCAGAGGACACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTCAAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGGGCTTCACACAGGACTaGAGGCAGAAGGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: VARVPPPEYLSHDGFFREGFTQD*RQKGIF
Trigger: AAAGATCCCCTTCTGCCTGCAGTCCTGTGTGAAGCC...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGGCTTCACACAGGACTaGAGGCAGAAGGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: QFDHLQMVELHSIIQGNVGFTQD*RQKGIF
Trigger: AAAGATCCCCTTCTGCCTGCAGTCCTGTGTGAAGCC...AACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAGTCAGTGCCTAGGGTaGTTATGGAGATGGCATAGG +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLSQCLG*LWRWHR
Trigger: CCTATGCCATCTCCATAAGCACCCTAGGCACTGACT...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGTGTGCACGTAGTCAGTaGCTAGGGTGCTTATGGAGA +
Preference number: 4 (lower is better)
Translates to: LALCPQTCARSQCLGCLWCARSQ*LGCLWR
Trigger: TCTCCATAAGCACCCTAGGCACTGACTACGTGCACA...CCATAAGCACCCTAGGCACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR GCA 90 bp AGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGGGCCACTTGGCTCTTTaGCCACAAACTTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: SLTTSRWLNCTASSRGMLGHLAL*PQTCAR
Trigger: ACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCC...CAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp AGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTTCCTTGGGCCACTTGGCTCTTTaGCCACAAACTTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: RSRAAIMSTPLGKHFFSLGHLAL*PQTCAR
Trigger: ACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCC...CAAGGAAAAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
ENST00000494474.5
CDS-3UTR GCA 90 bp TCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCGAGGGTGTTGCGCACTaGTTCAGCACTCAGCACACT +
Preference number: 4 (lower is better)
Translates to: SVDMYMCMVARVPPPEYLEGVAH*FSTQHT
Trigger: AGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTC...GAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GCAAGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACGAGGGTGTTGCGCACTaGTTCAGCACTCAGCACACT +
Preference number: 4 (lower is better)
Translates to: ASLDQEFNNFDVSFSCSNEGVAH*FSTQHT
Trigger: AGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTC...GTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp GTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCCTTGTTCCGAATTTCTaGCCCTTCACGCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: VLAKGSRFLQTTKAMYIALVPNF*PFTPWV
Trigger: GACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAG...GGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTACTTGTTCCGAATTTCTaGCCCTTCACGCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LCLLREWGILTPIESTSLLVPNF*PFTPWV
Trigger: GACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAG...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTCAGCTGCAGCAACATaGAGAGCTGTGCGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFSAAAT*RAVRES
Trigger: TGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTGA...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGCATCCAGGGGAATGTTaGCCCACCTGTCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQHPGEC*PTCPWQ
Trigger: TTGCCAAGGACAGGTGGGGCAACATTCCCCTGGATG...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTACATCCAGGGGAATGTTaGCCCACCTGTCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVHPGEC*PTCPWQ
Trigger: TTGCCAAGGACAGGTGGGGCAACATTCCCCTGGATG...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCATCCAGGGGAATGTTaGCCCACCTGTCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHHPGEC*PTCPWQ
Trigger: TTGCCAAGGACAGGTGGGGCAACATTCCCCTGGATG...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGGCAGGAGAAGGGGCCTaGCCCTTTAAAGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GILTPIESTSLSHQMTAWAGEGA*PFKAGS
Trigger: GGAGCCAGCTTTAAAGGGGCAGGCCCCTTCTCCTGC...CCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCCGGCTGGTGGCTGTGTaGCGTCTCTCTGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: FIPSHFVEILQHKIKLLCRLVAV*RLSALR
Trigger: GCGCAGGGCAGAGAGACGCCACACAGCCACCAGCCG...GCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR CCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCTGGTGCTGCGGCTaGTGGCTGTGTGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTSWCCG*WLCGVS
Trigger: AGAGACGCCACACAGCCACCAGCCGCAGCACCAGGA...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACAGAGGCCACCACTACTaGACTCTTGGACCACGCGGT +
Preference number: 4 (lower is better)
Translates to: FVTVHLDQGADNNGTSIDRGHHY*TLGPRG
Trigger: ACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCT...GTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486896.5
CDS-3UTR CCA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCTTCTTTCGGAATGCCTaGGTCAGGAGCACAATGTTG +
Preference number: 4 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSFFRNA*VRSTML
Trigger: CAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAA...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACGGTCTGGGTTTGACTTaGCCAGCTGAGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHGLGLT*PAEGCR
Trigger: CCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACC...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTGGTCTGGGTTTGACTTaGCCAGCTGAGGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSGLGLT*PAEGCR
Trigger: CCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACC...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GTGCCTCAGGTTGTCATAGTTGTGGAAATTGAAGAGAGACACCAACTTCTGGCACTGATACAGCTGACTTaGCTGGCAGGCCCACGTGGA +
Preference number: 4 (lower is better)
Translates to: VPQVVIVVEIEERHQLLALIQLT*LAGPRG
Trigger: TCCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAG...TGCCAGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATGACAACCTGAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACGTACCACCAGGAGGATaGCTCCTGATACAGCTGACT +
Preference number: 4 (lower is better)
Translates to: LHQSISLMMVSSGRGRGDVPPGG*LLIQLT
Trigger: AGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTAC...GTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAAAGCTGGTCCCCCTATaGCTGTTCCCCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQKLVPL*LFPSLS
Trigger: GGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTT...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCACTTCTGGCAGAAGCTaGTCCCCCTATGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SVDMYMCMVARVPPPEYLTSGRS*SPYGCS
Trigger: GGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGT...GAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTCACCAAATGACTGCTTaGTCCCCACTGAAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSHQMTA*SPLKQC
Trigger: ACACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTG...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCTGTCTGCTGAGGGAATaGGGTATTTTGACTCCCATA +
Preference number: 4 (lower is better)
Translates to: LFRISAPSRRGSNFRAQCCLLRE*GILTPI
Trigger: TATGGGAGTCAAAATACCCCATTCCCTCAGCAGACA...GCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTATGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTCTGTGAGGGAGCGCTaGACCTGGAAGACGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LCTLSAEGMGYFDSHRKHSVRER*TWKTEN
Trigger: ATTCTCCGTCTTCCAGGTCCAGCGCTCCCTCACAGA...GTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGGTTTCCTTCTCTGACTaGAATCTGAAGCAAACACCC +
Preference number: 4 (lower is better)
Translates to: EGELVVAQATWLFAHKLVVSFSD*NLKQTP
Trigger: GGGTGTTTGCTTCAGATTCCAGTCAGAGAAGGAAAC...CACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACGAAGGAGAACCCGGGTaGCTTTCTAGTGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHEGEPG*LSSGWR
Trigger: TCTCCACCCACTAGAAAGCCACCCGGGTTCTCCTTC...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610413.4
ENST00000623608.3
3UTR CAA 72 bp AACTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTaGCTGCTCACACACTTTCGGAAGAGATCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: NFFRNAWVRSTM*LLTHFRKRSRS
Trigger: GGACCGAGATCTCTTCCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR TCA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGCCACAGGTCTGGGTTTaGCTTGGCCAGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWPQVWV*LGQLRD
Trigger: ATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGG...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCCACAGGTCTGGGTTTaGCTTGGCCAGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSPQVWV*LGQLRD
Trigger: ATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGG...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTTTTGGTGGTTATGGATTACATGTGTGGCCAGCTCATGCTTTTTCTTGAGCAGCCCACAGAGTGCCGTTaGCCATCCACAGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: FLVVMDYMCGQLMLFLEQPTECR*PSTVHR
Trigger: CCTGTGCACTGTGGATGGTCAACGGCACTCTGTGGG...CTGCTCAAGAAAAAGCATGAGCTGGCCACACATGTAATCCATAACCACCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCCCCACAGAGTGCCGTTaGCCATCCACAGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCPTECR*PSTVHR
Trigger: CCTGTGCACTGTGGATGGTCAACGGCACTCTGTGGG...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GCGAAATGCAGCCAGGGGCTAAGTAGCAAGGGAACTTACAAAATCAAACTTCTCTGGAGATGGCATAGGTaGGGGGCTTCACACAGGACT +
Preference number: 4 (lower is better)
Translates to: AKCSQGLSSKGTYKIKLLWRWHR*GASHRT
Trigger: AGTCCTGTGTGAAGCCCCTCACCTATGCCATCTCCA...GAGAAGTTTGATTTTGTAAGTTCCCTTGCTACTTAGCCCCTGGCTGCATTTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR TCA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTTGGAGATGGCATAGGTaGGGGGCTTCACACAGGACT +
Preference number: 4 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPWRWHR*GASHRT
Trigger: AGTCCTGTGTGAAGCCCCTCACCTATGCCATCTCCA...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATCAATGGCACCAGCATTaGCCATGGGGTTATGGGGGA +
Preference number: 4 (lower is better)
Translates to: DMYMCMVARVPPPEYLSHQWHQH*PWGYGG
Trigger: TCCCCCATAACCCCATGGTCAATGCTGGTGCCATTG...ATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp ACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCATCCCAGCCATTTTGTTaGGATACTGCAACACAAAAT +
Preference number: 4 (lower is better)
Translates to: TPTSGRSWSPYGCSPACPSQPFC*DTATQN
Trigger: ATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGA...TGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCCTGTTTCCTTCTCTaGCTGGAATGTGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRPCFLL*LECGIA
Trigger: AGCAATGCCACATTCCAGTCAGAGAAGGAAACAGGG...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACGGCACATCATTCCCATaGCATTGGGTACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHGTSFP*HWVPPG
Trigger: TCCTGGTGGTACCCAATGTCATGGGAATGATGTGCC...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAGGCACATCATTCCCATaGCATTGGGTACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LCLLREWGILTPIESTSLGTSFP*HWVPPG
Trigger: TCCTGGTGGTACCCAATGTCATGGGAATGATGTGCC...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTGGGTTCCATATCCATGGCTaGCAAGGCAAACCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: PEYLSHDGFFRERKRRPGFHIHG*QGKPSK
Trigger: CTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAA...CCCAGGTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTACCACCTCCAGATGGTTaGACTGCACAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: LCLLREWGILTPIESTSLPPPDG*TAQHHP
Trigger: TGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGG...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGAC +
Preference number: 4 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVAHAFS*AGAVHD
Trigger: GTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGC...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGAC +
Preference number: 4 (lower is better)
Translates to: VLCLLREWGILTPIESTSAHAFS*AGAVHD
Trigger: GTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGC...GCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GCAAGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGAC +
Preference number: 4 (lower is better)
Translates to: ASLDQEFNNFDVSFSCSNAHAFS*AGAVHD
Trigger: GTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGC...GTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGAC +
Preference number: 4 (lower is better)
Translates to: LCTLSAEGMGYFDSHRKHAHAFS*AGAVHD
Trigger: GTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGC...GTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACTGCTTGGTCCCCACTaGAGCAGTGTAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPLLGPH*SSVALH
Trigger: ATGGAGAGCTACACTGCTTCAGTGGGGACCAAGCAG...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATAGAGCTGGGATGGTTTTaGGTGGGGCAAGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIELGWF*VGQAIR
Trigger: CCTAATGGCTTGCCCCACTCAAAACCATCCCAGCTC...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGAGCTGGGATGGTTTTaGGTGGGGCAAGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDELGWF*VGQAIR
Trigger: CCTAATGGCTTGCCCCACTCAAAACCATCCCAGCTC...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGATGACCCAATTTAGTACTTaGAGTTGGAGGAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: NGGDRHIIPMTLGTTRRMTQFST*SWRSGC
Trigger: ACACCCACTCCTCCAACTTCAAGTACTAAATTGGGT...CATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486433.5
CDS-3UTR GCA 90 bp TTGCTGAAACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACACGGCTCAGGGCCTTCTaGAGAGCCTTCATGGAGCGC +
Preference number: 4 (lower is better)
Translates to: LLKPMYSFPAILLRYCNTRLRAF*RAFMER
Trigger: GCGCTCCATGAAGGCTCTGCAGAAGGCCCTGAGCCG...TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTTCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR GCA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGGGTGCATCTCGCTCATaGAGTCTCGGAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWGASRS*SLGAED
Trigger: ATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACC...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAGGCTTCACACAGGACTaGAGGCAGAAGGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LCLLREWGILTPIESTSLGFTQD*RQKGIF
Trigger: AAAGATCCCCTTCTGCCTGCAGTCCTGTGTGAAGCC...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTTGTGCACGTAGTCAGTaGCTAGGGTGCTTATGGAGA +
Preference number: 4 (lower is better)
Translates to: QFDHLQMVELHSIIQGNVCARSQ*LGCLWR
Trigger: TCTCCATAAGCACCCTAGGCACTGACTACGTGCACA...AACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCAGAGGGTGTTGCGCACTaGTTCAGCACTCAGCACACT +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPEGVAH*FSTQHT
Trigger: AGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTC...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTACATGCCGCAGGAATaGATGAGGCTGAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFYMPQE*MRLRVL
Trigger: CAACACCCTCAGCCTCATGCATTCCTGCGGCATGTA...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTATACATGCCGCAGGAATaGATGAGGCTGAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVYMPQE*MRLRVL
Trigger: CAACACCCTCAGCCTCATGCATTCCTGCGGCATGTA...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATCTTGTTCCGAATTTCTaGCCCTTCACGCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDLVPNF*PFTPWV
Trigger: GACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAG...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTGGGCAACATGCAGAGCTGTaGGCGAGTCATAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PEYLSHDGFFRERKRRPGQHAEL*ASHSLS
Trigger: AGAAAGACTATGACTCGCGCACAGCTCTGCATGTTG...CCCAGGTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCATCAGCTGCAGCAACATaGAGAGCTGTGCGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPSAAAT*RAVRES
Trigger: TGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTGA...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTATGTGTGGCCAGCTCATaGTTTTTCTTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LCLLREWGILTPIESTSLCVASS*FFLSRG
Trigger: GCCCCTGCTCAAGAAAAAGCATGAGCTGGCCACACA...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGTGTGTGGCCAGCTCATaGTTTTTCTTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQCVASS*FFLSRG
Trigger: GCCCCTGCTCAAGAAAAAGCATGAGCTGGCCACACA...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTATGTGTGGCCAGCTCATaGTTTTTCTTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVCVASS*FFLSRG
Trigger: GCCCCTGCTCAAGAAAAAGCATGAGCTGGCCACACA...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ATTGAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGCAGTGGTGAACTTGTaGATAGGGATTCGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: IEGELVVAQATWLFAHKLAVVNL*IGIRSC
Trigger: ACAGGAACGAATCCCTATCCACAAGTTCACCACTGC...AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486896.5
CDS-3UTR CCA 90 bp CCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTGGGTTCTTTCGGAATGCCTaGGTCAGGAGCACAATGTTG +
Preference number: 4 (lower is better)
Translates to: PEYLSHDGFFRERKRRPGFFRNA*VRSTML
Trigger: CAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAA...CCCAGGTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGGTAGCGCAGGCCACTTaGCTCTTTGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQVAQAT*LFAHKL
Trigger: AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTAC...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTGACCACAGTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCTTGACCATGGGGTTATaGGGGATTCCTTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: LTTVLFRISAPSRRGSNFLTMGL*GIPSSL
Trigger: CAATGAGGAAGGAATCCCCCATAACCCCATGGTCAA...GAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGTGGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTATTGACCATGGGGTTATaGGGGATTCCTTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLLTMGL*GIPSSL
Trigger: CAATGAGGAAGGAATCCCCCATAACCCCATGGTCAA...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATGTACCACCAGGAGGATaGCTCCTGATACAGCTGACT +
Preference number: 4 (lower is better)
Translates to: CSNMQSCARVIVFLFHIHVPPGG*LLIQLT
Trigger: AGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTAC...ATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGGTACCACCAGGAGGATaGCTCCTGATACAGCTGACT +
Preference number: 4 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQVPPGG*LLIQLT
Trigger: AGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTAC...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGAAGCTGGTCCCCCTATaGCTGTTCCCCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GILTPIESTSLSHQMTAWKLVPL*LFPSLS
Trigger: GGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTT...CCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCAACTTCTGGCAGAAGCTaGTCCCCCTATGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPTSGRS*SPYGCS
Trigger: GGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGT...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTACTTCTGGCAGAAGCTaGTCCCCCTATGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPTSGRS*SPYGCS
Trigger: GGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGT...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAACTTCTGGCAGAAGCTaGTCCCCCTATGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQTSGRS*SPYGCS
Trigger: GGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGT...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTATTGACCACCTCCAGATaGTTGAACTGCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLLTTSR*LNCTAS
Trigger: TGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAA...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CAGCTGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCACCAAATGACTGCTTaGTCCCCACTGAAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: QLQQHAELCASHSLSVPYHQMTA*SPLKQC
Trigger: ACACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTG...ATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGTGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VARVPPPEYLSHDGFFREWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAACCTGGGTGAAGAGCTaGGATGGTTTTGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPTWVKS*DGFEWG
Trigger: GCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGT...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTC +
Preference number: 4 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQSSSMS*PRGVDF
Trigger: GAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCT...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGACCTCTAGCTGTGGCTaGGAAGGAGGGGCGGAGCGA +
Preference number: 4 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMTSSCG*EGGAER
Trigger: TCGCTCCGCCCCTCCTTCCCAGCCACAGCTAGAGGT...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACTTTCTGATGAATCATaGTCCTGGTGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPLSDES*SWCCGW
Trigger: CCAGCCGCAGCACCAGGATCATGATTCATCAGAAAG...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000623608.3
CDS-3UTR TCA 90 bp ATCAAACTTCTCTGCTTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATTCGGAGCCGAGGATCTaGTGTCTGCAGTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: IKLLCFVTVHLDQGADNNSEPRI*CLQSSG
Trigger: GCCACTGGACTGCAGACATCAGATCCTCGGCTCCGA...ATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486896.5
CDS-3UTR TCA 90 bp CACTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCCCTCAAAATCAGGAATaGCAAACTTCTTTCGGAATG +
Preference number: 4 (lower is better)
Translates to: HFRKRSRSKRPPLLDSWTPQNQE*QTSFGM
Trigger: CATTCCGAAAGAAGTTTGTCATTCCTGATTTTGAGG...GGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR TCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATACCCACAGAGTGCCGTTaGCCATCCACAGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: QTTKAMYIAIPTSHILWIPTECR*PSTVHR
Trigger: CCTGTGCACTGTGGATGGTCAACGGCACTCTGTGGG...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCAATGGCACCAGCATTaGCCATGGGGTTATGGGGGA +
Preference number: 4 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYQWHQH*PWGYGG
Trigger: TCCCCCATAACCCCATGGTCAATGCTGGTGCCATTG...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGCAATGGCACCAGCATTaGCCATGGGGTTATGGGGGA +
Preference number: 4 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWQWHQH*PWGYGG
Trigger: TCCCCCATAACCCCATGGTCAATGCTGGTGCCATTG...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAGGAATGTGGCATTGCTaGAACCCATGTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLGMWHC*NPCIHS
Trigger: GGAATGAATACATGGGTTTCAGCAATGCCACATTCC...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGCCCTGTTTCCTTCTCTaGCTGGAATGTGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: LQSILIRELTTMAPALTMPCFLL*LECGIA
Trigger: AGCAATGCCACATTCCAGTCAGAGAAGGAAACAGGG...CATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR TCA 90 bp GATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGGCACATCATTCCCATaGCATTGGGTACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: DMYMCMVARVPPPEYLSHGTSFP*HWVPPG
Trigger: TCCTGGTGGTACCCAATGTCATGGGAATGATGTGCC...ATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCACTTGTCCAATGGGGGTaGCAGGCACATCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPLVQWG*QAHHSH
Trigger: ATGGGAATGATGTGCCTGTCACCCCCATTGGACAAG...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCATAGTTGTGGAAATTaGAGAGAGACACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LFRISAPSRRGSNFRAQCHSCGN*RETPTS
Trigger: AGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATG...GCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp TCCAATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGCATAGTTGTGGAAATTaGAGAGAGACACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: SNGGDRHIIPMTLGTTRRHSCGN*RETPTS
Trigger: AGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATG...CCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACTTCCATATCCATGGCTaGCAAGGCAAACCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: LHQSISLMMVSSGRGRGDFHIHG*QGKPSK
Trigger: CTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAA...GTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GTGCCTCAGGTTGTCATAGTTGTGGAAATTGAAGAGAGACACCAACTTCTGGCACCACCTCCAGATGGTTaGACTGCACAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: VPQVVIVVEIEERHQLLAPPPDG*TAQHHP
Trigger: TGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGG...TGCCAGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATGACAACCTGAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCTGCTTGGTCCCCACTaGAGCAGTGTAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSLLGPH*SSVALH
Trigger: ATGGAGAGCTACACTGCTTCAGTGGGGACCAAGCAG...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGGAGCTGGGATGGTTTTaGGTGGGGCAAGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: GILTPIESTSLSHQMTAWELGWF*VGQAIR
Trigger: CCTAATGGCTTGCCCCACTCAAAACCATCCCAGCTC...CCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCTGATGTAGGCTGCCACTaGTCCTGGTGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFPAILLRYCNTKSNFSADVGCH*SWCCGW
Trigger: CCAGCCGCAGCACCAGGATCAGTGGCAGCCTACATC...AGCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494474.5
CDS-3UTR GCA 90 bp CACAAAATACTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGCCTTCATGGAGCGCATaGCCCAGCAAGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: HKILSLSIKLAVSSSSSMPSWSA*PSKPPA
Trigger: AGCCGGAGGCTTGCTGGGGCATGCGCTCCATGAAGG...CATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAGTATTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000479952.5
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCTCCTTCATGGAGCGCATaGCCCAGCAAGCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SFPAILLRYCNTKSNFSAPSWSA*PSKPPA
Trigger: AGCCGGAGGCTTGCTGGGGCATGCGCTCCATGAAGG...AGCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494474.5
CDS-3UTR GCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTACCAGGCGGGACAGCATaGCACTTTCTGATGAATCAT +
Preference number: 4 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVPGGTA*HFLMNH
Trigger: ATGATTCATCAGAAAGTGGCATGCTGTCCCGCCTGG...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000623608.3
CDS-3UTR GCA 90 bp TTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGCCAGGCGGGACAGCATaGCACTTTCTGATGAATCAT +
Preference number: 4 (lower is better)
Translates to: LQSILIRELTTMAPALTMPGGTA*HFLMNH
Trigger: ATGATTCATCAGAAAGTGGCATGCTGTCCCGCCTGG...CATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486896.5
CDS-3UTR GCA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCCCAGGCGGGACAGCATaGCACTTTCTGATGAATCAT +
Preference number: 4 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFPGGTA*HFLMNH
Trigger: ATGATTCATCAGAAAGTGGCATGCTGTCCCGCCTGG...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000623608.3
CDS-3UTR GCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTGGTGCATCTCGCTCATaGAGTCTCGGAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTGASRS*SLGAED
Trigger: ATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACC...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp AAACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGGAAGGGTGCATCTCGCTCATaGAGTCTCGGAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: KPMYSFPAILLRYCNTWKGASRS*SLGAED
Trigger: ATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACC...CTTCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR GCA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCGGTGCATCTCGCTCATaGAGTCTCGGAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCGASRS*SLGAED
Trigger: ATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACC...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTCTTGGACCACGCGGTaGATCTCGCTCATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: WGILTPIESTSLSHQMTASWTTR*ISLMQS
Trigger: AGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGA...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp CTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGATCAGGAGCACAATGTTaGTGCTCACACACTTTCGGA +
Preference number: 4 (lower is better)
Translates to: LESLHQSISLMMVSSGRGSGAQC*CSHTFG
Trigger: TCCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGA...TCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAGGCTTCACACAGGACTaGAGGCAGAAGGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQGFTQD*RQKGIF
Trigger: AAAGATCCCCTTCTGCCTGCAGTCCTGTGTGAAGCC...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAGGCTTCACACAGGACTaGAGGCAGAAGGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPGFTQD*RQKGIF
Trigger: AAAGATCCCCTTCTGCCTGCAGTCCTGTGTGAAGCC...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGAGTCAGTGCCTAGGGTaGTTATGGAGATGGCATAGG +
Preference number: 4 (lower is better)
Translates to: LQSILIRELTTMAPALTMSQCLG*LWRWHR
Trigger: CCTATGCCATCTCCATAAGCACCCTAGGCACTGACT...CATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR GCA 90 bp CTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTGTGCACGTAGTCAGTaGCTAGGGTGCTTATGGAGA +
Preference number: 4 (lower is better)
Translates to: LCTLSAEGMGYFDSHRKHCARSQ*LGCLWR
Trigger: TCTCCATAAGCACCCTAGGCACTGACTACGTGCACA...GTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCTGTGCACGTAGTCAGTaGCTAGGGTGCTTATGGAGA +
Preference number: 4 (lower is better)
Translates to: VLAKGSRFLQTTKAMYIACARSQ*LGCLWR
Trigger: TCTCCATAAGCACCCTAGGCACTGACTACGTGCACA...GGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCAGGCCACTTGGCTCTTTaGCCACAAACTTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPGHLAL*PQTCAR
Trigger: ACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCC...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAGGCCACTTGGCTCTTTaGCCACAAACTTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQGHLAL*PQTCAR
Trigger: ACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCC...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTGGCCACTTGGCTCTTTaGCCACAAACTTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPGHLAL*PQTCAR
Trigger: ACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCC...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATGAGGGTGTTGCGCACTaGTTCAGCACTCAGCACACT +
Preference number: 4 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYEGVAH*FSTQHT
Trigger: AGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTC...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GTGCCTCAGGTTGTCATAGTTGTGGAAATTGAAGAGAGACACCAACTTCTGGCATACATGCCGCAGGAATaGATGAGGCTGAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: VPQVVIVVEIEERHQLLAYMPQE*MRLRVL
Trigger: CAACACCCTCAGCCTCATGCATTCCTGCGGCATGTA...TGCCAGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATGACAACCTGAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp TCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCGATGTGTCCTTCAGCTaGAGCAACATGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SVDMYMCMVARVPPPEYLDVSFS*SNMQSC
Trigger: ACAGCTCTGCATGTTGCTGCAGCTGAAGGACACATC...GAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACGATGTGTCCTTCAGCTaGAGCAACATGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHDVSFS*SNMQSC
Trigger: ACAGCTCTGCATGTTGCTGCAGCTGAAGGACACATC...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACAAAAGGATTCACTTTaGAAGCCTCGATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: DHLQMVELHSIIQGNVAPQKDSL*KPRSGI
Trigger: AATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTG...TGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTATCCAGATGGTTGAACTaGACAGCATCATCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVSRWLN*TASSRG
Trigger: TCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGA...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTTCCAGATGGTTGAACTaGACAGCATCATCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSSRWLN*TASSRG
Trigger: TCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGA...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTCAGGGCCTCAGCTGCTaGCTCAGCCTGAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTQGLSC*LSLSFR
Trigger: TCTGAAACTCAGGCTGAGGCAGCAGCTGAGGCCCTG...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTTCGAAGAGCTGAGATGTGTGGCCAGCTCATaGTTTTTCTTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SLSVPYPWLTRQTFEELRCVASS*FFLSRG
Trigger: GCCCCTGCTCAAGAAAAAGCATGAGCTGGCCACACA...TCTCAGCTCTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAACAGAAAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGAGCAGTGGTGAACTTGTaGATAGGGATTCGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRAVVNL*IGIRSC
Trigger: ACAGGAACGAATCCCTATCCACAAGTTCACCACTGC...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTCCACTACTGGACTCTTaGACCACGCGGTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTPLLDS*TTRCIS
Trigger: CGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGG...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CCA 90 bp GAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTAAGATGCGATCCACATaGCCCGTGAACTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: EVEIKGSHHVHPLRKALLKMRST*PVNSSK
Trigger: TTTTGAGGAGTTCACGGGCCATGTGGATCGCATCTT...AAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000486896.5
CDS-3UTR CCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCAGTAGCGCAGGCCACTTaGCTCTTTGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPVAQAT*LFAHKL
Trigger: AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTAC...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTTCCTTGTTGACCATGGGGTTATaGGGGATTCCTTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: RSRAAIMSTPLGKHFFSLLTMGL*GIPSSL
Trigger: CAATGAGGAAGGAATCCCCCATAACCCCATGGTCAA...CAAGGAAAAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CCA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTGTACCACCAGGAGGATaGCTCCTGATACAGCTGACT +
Preference number: 4 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPVPPGG*LLIQLT
Trigger: AGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTAC...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCACTTCTGGCAGAAGCTaGTCCCCCTATGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSTSGRS*SPYGCS
Trigger: GGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGT...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTTCCTTGTTTCTAAGTTCTCTTTaGACAGGGCCTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RSRAAIMSTPLGKHFFSLFLSSL*TGPQLL
Trigger: CAGCAGCTGAGGCCCTGTCCAAAGAGAACTTAGAAA...CAAGGAAAAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486433.5
CDS-3UTR CCA 90 bp TACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCTATTTTTGGTGGTTATaGATTACATGTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: YLEAQSLWIAVLQVSSEAYFWWL*ITCVAS
Trigger: GCTGGCCACACATGTAATCCATAACCACCAAAAATA...GGCCTCAGAGGACACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTCAAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTATTTTTGGTGGTTATaGATTACATGTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VLFRISAPSRRGSNFRAQYFWWL*ITCVAS
Trigger: GCTGGCCACACATGTAATCCATAACCACCAAAAATA...CTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACCACCAAATGACTGCTTaGTCCCCACTGAAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LCTLSAEGMGYFDSHRKHHQMTA*SPLKQC
Trigger: ACACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTG...GTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCACCAAATGACTGCTTaGTCCCCACTGAAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHHQMTA*SPLKQC
Trigger: ACACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTG...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GTGCTCATACCATGCTTTCTAAGTTCTCTTTGGACAGGGCCTCAGCTGCTGCCTTGTCTGCTGAGGGAATaGGGTATTTTGACTCCCATA +
Preference number: 4 (lower is better)
Translates to: VLIPCFLSSLWTGPQLLPCLLRE*GILTPI
Trigger: TATGGGAGTCAAAATACCCCATTCCCTCAGCAGACA...AGGCAGCAGCTGAGGCCCTGTCCAAAGAGAACTTAGAAAGCATGGTATGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp GTGCCTCAGGTTGTCATAGTTGTGGAAATTGAAGAGAGACACCAACTTCTGGCAGAAGCCCAGTCTCTCTaGATAGCTGTACTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VPQVVIVVEIEERHQLLAEAQSL*IAVLQV
Trigger: CACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTC...TGCCAGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATGACAACCTGAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGAAGCCCAGTCTCTCTaGATAGCTGTACTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDEAQSL*IAVLQV
Trigger: CACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTC...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SVDMYMCMVARVPPPEYLWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...GAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTC +
Preference number: 4 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPSSSMS*PRGVDF
Trigger: GAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCT...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTC +
Preference number: 4 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPSSSMS*PRGVDF
Trigger: GAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCT...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTC +
Preference number: 4 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDSSSMS*PRGVDF
Trigger: GAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCT...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTGTTTCCTTCTCTGACTaGAATCTGAAGCAAACACCC +
Preference number: 4 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSVSFSD*NLKQTP
Trigger: GGGTGTTTGCTTCAGATTCCAGTCAGAGAAGGAAAC...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486433.5
CDS-3UTR TCA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCTTTCTGATGAATCATaGTCCTGGTGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSLSDES*SWCCGW
Trigger: CCAGCCGCAGCACCAGGATCATGATTCATCAGAAAG...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000623608.3
CDS-3UTR TCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGATCCACATGGCCCGTaGACTCCTCAAAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPDPHGP*TPQNQE
Trigger: TTCCTGATTTTGAGGAGTTCACGGGCCATGTGGATC...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp ATCAAACTTCTCTGCTTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATCCACAGGTCTGGGTTTaGCTTGGCCAGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: IKLLCFVTVHLDQGADNNPQVWV*LGQLRD
Trigger: ATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGG...ATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR TCA 90 bp AGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACATGCCCTGTTTCCTTCTCTaGCTGGAATGTGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: SLDQEFNNFDVSFSCSNMPCFLL*LECGIA
Trigger: AGCAATGCCACATTCCAGTCAGAGAAGGAAACAGGG...CATGTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424141.6
CDS-3UTR TCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAACCCTGTTTCCTTCTCTaGCTGGAATGTGGCATTGCT +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQPCFLL*LECGIA
Trigger: AGCAATGCCACATTCCAGTCAGAGAAGGAAACAGGG...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAATGCCTGATTCACAAGTaGCCTCCACAGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQCLIHK*PPQNTA
Trigger: AGCTGTGTTCTGTGGAGGTCACTTGTGAATCAGGCA...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGCTTGTCCAATGGGGGTaGCAGGCACATCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: GILTPIESTSLSHQMTAWLVQWG*QAHHSH
Trigger: ATGGGAATGATGTGCCTGTCACCCCCATTGGACAAG...CCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTCAGCAAATAACAGGTTaGCCACAGTCTTGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: QFDHLQMVELHSIIQGNVQQITG*PQSCSE
Trigger: TTCGGAACAAGACTGTGGTCAACCTGTTATTTGCTG...AACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGACAGCAAATAACAGGTTaGCCACAGTCTTGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: LSIKLAVSSSSSMSWPRGQQITG*PQSCSE
Trigger: TTCGGAACAAGACTGTGGTCAACCTGTTATTTGCTG...TCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACAGCAAATAACAGGTTaGCCACAGTCTTGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRQQITG*PQSCSE
Trigger: TTCGGAACAAGACTGTGGTCAACCTGTTATTTGCTG...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATAAACCTTCGAAGAGCTaGGACATCGCCACTATAGGC +
Preference number: 4 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDKPSKS*DIATIG
Trigger: GCCTATAGTGGCGATGTCTCAGCTCTTCGAAGGTTT...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCTTCCATATCCATGGCTaGCAAGGCAAACCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: VLAKGSRFLQTTKAMYIAFHIHG*QGKPSK
Trigger: CTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAA...GGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTCTGCTTGGTCCCCACTaGAGCAGTGTAGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTLLGPH*SSVALH
Trigger: ATGGAGAGCTACACTGCTTCAGTGGGGACCAAGCAG...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGAAGAGTATCTCTCTCATaGTGGTTTCTTCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRRVSLS*WFLQGE
Trigger: CTCTCCCTGAAGAAACCATCATGAGAGAGATACTCT...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGCTTCCGTGGCATTGCTaGAACCCATGTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: LQSILIRELTTMAPALTMLPWHC*NPCIHS
Trigger: GGAATGAATACATGGGTTTCAGCAATGCCACGGAAG...CATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR GCA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGGTGCATCTCGCTCATaGAGTCTCGGAGCCGAGGAT +
Preference number: 4 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMGASRS*SLGAED
Trigger: ATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACC...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCTTGGACCACGCGGTaGATCTCGCTCATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTSWTTR*ISLMQS
Trigger: AGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGA...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTTCAGGAGCACAATGTTaGTGCTCACACACTTTCGGA +
Preference number: 4 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSSGAQC*CSHTFG
Trigger: TCCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGA...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAAGTCAGTGCCTAGGGTaGTTATGGAGATGGCATAGG +
Preference number: 4 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPSQCLG*LWRWHR
Trigger: CCTATGCCATCTCCATAAGCACCCTAGGCACTGACT...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GCGAAATGCAGCCAGGGGCTAAGTAGCAAGGGAACTTACAAAATCAAACTTCTCAGTCAGTGCCTAGGGTaGTTATGGAGATGGCATAGG +
Preference number: 4 (lower is better)
Translates to: AKCSQGLSSKGTYKIKLLSQCLG*LWRWHR
Trigger: CCTATGCCATCTCCATAAGCACCCTAGGCACTGACT...GAGAAGTTTGATTTTGTAAGTTCCCTTGCTACTTAGCCCCTGGCTGCATTTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR GCA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTAGTCAGTGCCTAGGGTaGTTATGGAGATGGCATAGG +
Preference number: 4 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPSQCLG*LWRWHR
Trigger: CCTATGCCATCTCCATAAGCACCCTAGGCACTGACT...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATAGTCAGTGCCTAGGGTaGTTATGGAGATGGCATAGG +
Preference number: 4 (lower is better)
Translates to: DMYMCMVARVPPPEYLSHSQCLG*LWRWHR
Trigger: CCTATGCCATCTCCATAAGCACCCTAGGCACTGACT...ATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGGAAGAGAGGCCACTTGGCTCTTTaGCCACAAACTTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: PMYSFPAILLRYCNTWKRGHLAL*PQTCAR
Trigger: ACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCC...TCTCTTCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR GCA 90 bp TGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATCAACATGCAGAGCTGTaGGCGAGTCATAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CSNMQSCARVIVFLFHIHQHAEL*ASHSLS
Trigger: AGAAAGACTATGACTCGCGCACAGCTCTGCATGTTG...ATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTGATGTGTCCTTCAGCTaGAGCAACATGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPDVSFS*SNMQSC
Trigger: ACAGCTCTGCATGTTGCTGCAGCTGAAGGACACATC...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTTCGAAGAGCTGAGAGATGTGTCCTTCAGCTaGAGCAACATGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SLSVPYPWLTRQTFEELRDVSFS*SNMQSC
Trigger: ACAGCTCTGCATGTTGCTGCAGCTGAAGGACACATC...TCTCAGCTCTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAACAGAAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATAGATGTGTCCTTCAGCTaGAGCAACATGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIDVSFS*SNMQSC
Trigger: ACAGCTCTGCATGTTGCTGCAGCTGAAGGACACATC...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCCATCCAGGGGAATGTTaGCCCACCTGTCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCHPGEC*PTCPWQ
Trigger: TTGCCAAGGACAGGTGGGGCAACATTCCCCTGGATG...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAATCCAGATGGTTGAACTaGACAGCATCATCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQSRWLN*TASSRG
Trigger: TCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGA...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTTCGAAGAGCTGAGATCCAGATGGTTGAACTaGACAGCATCATCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SLSVPYPWLTRQTFEELRSRWLN*TASSRG
Trigger: TCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGA...TCTCAGCTCTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAACAGAAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp GGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTGTGTGGCCAGCTCATaGTTTTTCTTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GILTPIESTSLSHQMTAWCVASS*FFLSRG
Trigger: GCCCCTGCTCAAGAAAAAGCATGAGCTGGCCACACA...CCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACAAGTCACCAAATGACTaGTTGGTCCCCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHKSPND*LVPTEA
Trigger: TGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTT...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp GTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCAAGTCACCAAATGACTaGTTGGTCCCCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: VLAKGSRFLQTTKAMYIAKSPND*LVPTEA
Trigger: TGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTT...GGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCAAGTCACCAAATGACTaGTTGGTCCCCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFKSPND*LVPTEA
Trigger: TGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTT...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGAGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCGCAGTGGTGAACTTGTaGATAGGGATTCGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFAVVNL*IGIRSC
Trigger: ACAGGAACGAATCCCTATCCACAAGTTCACCACTGC...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CCA 90 bp GTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCGCAGTGGTGAACTTGTaGATAGGGATTCGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VLCLLREWGILTPIESTSAVVNL*IGIRSC
Trigger: ACAGGAACGAATCCCTATCCACAAGTTCACCACTGC...GCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATACCACTACTGGACTCTTaGACCACGCGGTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: QTTKAMYIAIPTSHILWIPLLDS*TTRCIS
Trigger: CGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGG...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CCA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTATTCTTTCGGAATGCCTaGGTCAGGAGCACAATGTTG +
Preference number: 4 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVFFRNA*VRSTML
Trigger: CAACATTGTGCTCCTGACCCAGGCATTCCGAAAGAA...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp TGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATAAGATGCGATCCACATaGCCCGTGAACTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: CSNMQSCARVIVFLFHIHKMRST*PVNSSK
Trigger: TTTTGAGGAGTTCACGGGCCATGTGGATCGCATCTT...ATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGGTAGCGCAGGCCACTTaGCTCTTTGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWVAQAT*LFAHKL
Trigger: AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTAC...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTGACCATGGGGTTATaGGGGATTCCTTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFLTMGL*GIPSSL
Trigger: CAATGAGGAAGGAATCCCCCATAACCCCATGGTCAA...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGGTTTCCTTCTCTGACTaGAATGTGGCATTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: LALCPQTCARSQCLGCLWVSFSD*NVALLK
Trigger: TTTCAGCAATGCCACATTCCAGTCAGAGAAGGAAAC...CCATAAGCACCCTAGGCACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR CCA 90 bp TTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGTTGACCACCTCCAGATaGTTGAACTGCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: LQSILIRELTTMAPALTMLTTSR*LNCTAS
Trigger: TGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAA...CATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424141.6
CDS-3UTR CCA 90 bp TGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATTTTCTAAGTTCTCTTTaGACAGGGCCTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CSNMQSCARVIVFLFHIHFLSSL*TGPQLL
Trigger: CAGCAGCTGAGGCCCTGTCCAAAGAGAACTTAGAAA...ATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACTTTCTAAGTTCTCTTTaGACAGGGCCTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHFLSSL*TGPQLL
Trigger: CAGCAGCTGAGGCCCTGTCCAAAGAGAACTTAGAAA...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCACACCAAATGACTGCTTaGTCCCCACTGAAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPHQMTA*SPLKQC
Trigger: ACACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTG...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGTGTCTGCTGAGGGAATaGGGTATTTTGACTCCCATA +
Preference number: 4 (lower is better)
Translates to: VARVPPPEYLSHDGFFRECLLRE*GILTPI
Trigger: TATGGGAGTCAAAATACCCCATTCCCTCAGCAGACA...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCGAAGCCCAGTCTCTCTaGATAGCTGTACTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSEAQSL*IAVLQV
Trigger: CACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTC...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCAGCAGCAGCATGTCCTaGCCAAGGGGAGTAGATTTC +
Preference number: 4 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSSSSMS*PRGVDF
Trigger: GAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCT...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCTAGGGAGCGCTGGACCTaGAAGACGGAGAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: SFPAILLRYCNTKSNFSARERWT*KTENVG
Trigger: GCCCACATTCTCCGTCTTCCAGGTCCAGCGCTCCCT...AGCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494474.5
CDS-3UTR CCA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCTCTGTGAGGGAGCGCTaGACCTGGAAGACGGAGAAT +
Preference number: 4 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCSVRER*TWKTEN
Trigger: ATTCTCCGTCTTCCAGGTCCAGCGCTCCCTCACAGA...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTTTTGGTGGTTATGGATTACATGTGTGGCCAGCTCATGCTTTTTCTTGAGCAGCTTTCTGATGAATCATaGTCCTGGTGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: FLVVMDYMCGQLMLFLEQLSDES*SWCCGW
Trigger: CCAGCCGCAGCACCAGGATCATGATTCATCAGAAAG...CTGCTCAAGAAAAAGCATGAGCTGGCCACACATGTAATCCATAACCACCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000623608.3
CDS-3UTR TCA 90 bp GAAATAAGGCTTCTAGTATGGGCTGGTGCACCTGGTAGTGGGGTTAGAGAGCCACCTCAAAATCAGGAATaGCAAACTTCTTTCGGAATG +
Preference number: 4 (lower is better)
Translates to: EIRLLVWAGAPGSGVREPPQNQE*QTSFGM
Trigger: CATTCCGAAAGAAGTTTGTCATTCCTGATTTTGAGG...TGGCTCTCTAACCCCACTACCAGGTGCACCAGCCCATACTAGAAGCCTTATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR TCA 90 bp CCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGGAAGAGAGATCCACATGGCCCGTaGACTCCTCAAAATCAGGAA +
Preference number: 4 (lower is better)
Translates to: PMYSFPAILLRYCNTWKRDPHGP*TPQNQE
Trigger: TTCCTGATTTTGAGGAGTTCACGGGCCATGTGGATC...TCTCTTCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR TCA 90 bp CACAAAATACTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGCCACAGGTCTGGGTTTaGCTTGGCCAGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: HKILSLSIKLAVSSSSSMPQVWV*LGQLRD
Trigger: ATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGG...CATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAGTATTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGTCCCAGCCATTTTGTTaGGATACTGCAACACAAAAT +
Preference number: 4 (lower is better)
Translates to: LALCPQTCARSQCLGCLWSQPFC*DTATQN
Trigger: ATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGA...CCATAAGCACCCTAGGCACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR TCA 90 bp GTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCGGAATGTGGCATTGCTaGAACCCATGTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: VLAKGSRFLQTTKAMYIAGMWHC*NPCIHS
Trigger: GGAATGAATACATGGGTTTCAGCAATGCCACATTCC...GGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTAGCACTTCTTTTCCTTaGGATAATAGCCGATGGCAT +
Preference number: 4 (lower is better)
Translates to: EVEIKGSHHVHPLRKALLSTSFP*DNSRWH
Trigger: ATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGCT...AAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
CDS-3UTR TCA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATTGCCTGATTCACAAGTaGCCTCCACAGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYCLIHK*PPQNTA
Trigger: AGCTGTGTTCTGTGGAGGTCACTTGTGAATCAGGCA...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTGGCACATCATTCCCATaGCATTGGGTACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVAGTSFP*HWVPPG
Trigger: TCCTGGTGGTACCCAATGTCATGGGAATGATGTGCC...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCGGCACATCATTCCCATaGCATTGGGTACCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCGTSFP*HWVPPG
Trigger: TCCTGGTGGTACCCAATGTCATGGGAATGATGTGCC...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTGACCACAGTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCATAGTTGTGGAAATTaGAGAGAGACACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LTTVLFRISAPSRRGSNFHSCGN*RETPTS
Trigger: AGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATG...GAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGTGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGCAGCAAATAACAGGTTaGCCACAGTCTTGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQQQITG*PQSCSE
Trigger: TTCGGAACAAGACTGTGGTCAACCTGTTATTTGCTG...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTTTCCATATCCATGGCTaGCAAGGCAAACCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPFHIHG*QGKPSK
Trigger: CTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAA...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCGCTCATGCTTTTTCTTaGGCAGGGGCTGTCCATGAC +
Preference number: 4 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCAHAFS*AGAVHD
Trigger: GTCATGGACAGCCCCTGCTCAAGAAAAAGCATGAGC...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGAGCTGGGATGGTTTTaGGTGGGGCAAGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMELGWF*VGQAIR
Trigger: CCTAATGGCTTGCCCCACTCAAAACCATCCCAGCTC...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGAGAGTATCTCTCTCATaGTGGTTTCTTCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQRVSLS*WFLQGE
Trigger: CTCTCCCTGAAGAAACCATCATGAGAGAGATACTCT...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGGAGAAAAAGGGACATTaGGGCTCCACTTGGTTAAGA +
Preference number: 4 (lower is better)
Translates to: LQSILIRELTTMAPALTMEKKGH*GSTWLR
Trigger: TCTTAACCAAGTGGAGCCTCAATGTCCCTTTTTCTC...CATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR GCA 90 bp ACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGGAAGAGCGAGGATCTGATGTCTaGAGTCCAGTGGCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: THVFIPSHFVEILQHLEERGSDV*SPVAFS
Trigger: ACTAAAGGCCACTGGACTGCAGACATCAGATCCTCG...CTCTTCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR GCA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTCGAGGATCTGATGTCTaGAGTCCAGTGGCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: WGILTPIESTSLSHQMTARGSDV*SPVAFS
Trigger: ACTAAAGGCCACTGGACTGCAGACATCAGATCCTCG...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATCTTGGACCACGCGGTaGATCTCGCTCATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QTTKAMYIAIPTSHILWISWTTR*ISLMQS
Trigger: AGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGA...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATAGGAGCACAATGTTGCTaGTCACACACTTTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIGAQCC*SHTFGR
Trigger: TCTTCCGAAAGTGTGTGAGCAGCAACATTGTGCTCC...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTGGAGCACAATGTTGCTaGTCACACACTTTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPGAQCC*SHTFGR
Trigger: TCTTCCGAAAGTGTGTGAGCAGCAACATTGTGCTCC...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCATCAGGAGCACAATGTTaGTGCTCACACACTTTCGGA +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPSGAQC*CSHTFG
Trigger: TCCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGA...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCAGTCAGTGCCTAGGGTaGTTATGGAGATGGCATAGG +
Preference number: 4 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSSQCLG*LWRWHR
Trigger: CCTATGCCATCTCCATAAGCACCCTAGGCACTGACT...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTGGCCACTTGGCTCTTTaGCCACAAACTTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTGHLAL*PQTCAR
Trigger: ACGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCC...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCTACATGCCGCAGGAATaGATGAGGCTGAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCYMPQE*MRLRVL
Trigger: CAACACCCTCAGCCTCATGCATTCCTGCGGCATGTA...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACAACATGCAGAGCTGTaGGCGAGTCATAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPQHAEL*ASHSLS
Trigger: AGAAAGACTATGACTCGCGCACAGCTCTGCATGTTG...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCACAACATGCAGAGCTGTaGGCGAGTCATAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPQHAEL*ASHSLS
Trigger: AGAAAGACTATGACTCGCGCACAGCTCTGCATGTTG...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATCAACATGCAGAGCTGTaGGCGAGTCATAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDQHAEL*ASHSLS
Trigger: AGAAAGACTATGACTCGCGCACAGCTCTGCATGTTG...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGTCAGCTGCAGCAACATaGAGAGCTGTGCGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMSAAAT*RAVRES
Trigger: TGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTGA...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTACAAAAGGATTCACTTTaGAAGCCTCGATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLQKDSL*KPRSGI
Trigger: AATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTG...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATTCCAGATGGTTGAACTaGACAGCATCATCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYSRWLN*TASSRG
Trigger: TCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGA...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTTCGAAGAGCTGAGAAAGTCACCAAATGACTaGTTGGTCCCCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLSVPYPWLTRQTFEELRKSPND*LVPTEA
Trigger: TGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTT...TCTCAGCTCTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAACAGAAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp TGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: CSNMQSCARVIVFLFHIHVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...ATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp TTCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCTCTGCAGAGCCTTCATaGAGCGCATGCCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: FIPSHFVEILQHKIKLLCSAEPS*SACPSK
Trigger: CTTGCTGGGGCATGCGCTCCATGAAGGCTCTGCAGA...GCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR CCA 90 bp CACAAAATACTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGCCACTACTGGACTCTTaGACCACGCGGTGCATCTCG +
Preference number: 4 (lower is better)
Translates to: HKILSLSIKLAVSSSSSMPLLDS*TTRCIS
Trigger: CGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGG...CATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAGTATTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTGTAGCGCAGGCCACTTaGCTCTTTGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTVAQAT*LFAHKL
Trigger: AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTAC...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAATTGACCATGGGGTTATaGGGGATTCCTTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQLTMGL*GIPSSL
Trigger: CAATGAGGAAGGAATCCCCCATAACCCCATGGTCAA...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACTTGACCATGGGGTTATaGGGGATTCCTTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: FVTVHLDQGADNNGTSIDLTMGL*GIPSSL
Trigger: CAATGAGGAAGGAATCCCCCATAACCCCATGGTCAA...GTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCATTGACCATGGGGTTATaGGGGATTCCTTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPLTMGL*GIPSSL
Trigger: CAATGAGGAAGGAATCCCCCATAACCCCATGGTCAA...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATTGACCATGGGGTTATaGGGGATTCCTTCCTCATTG +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCILTMGL*GIPSSL
Trigger: CAATGAGGAAGGAATCCCCCATAACCCCATGGTCAA...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGAGTTTCCTTCTCTGACTaGAATGTGGCATTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRVSFSD*NVALLK
Trigger: TTTCAGCAATGCCACATTCCAGTCAGAGAAGGAAAC...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATAACTTCTGGCAGAAGCTaGTCCCCCTATGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: QTTKAMYIAIPTSHILWITSGRS*SPYGCS
Trigger: GGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGT...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTTCGAAGAGCTGAGATTGACCACCTCCAGATaGTTGAACTGCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: SLSVPYPWLTRQTFEELRLTTSR*LNCTAS
Trigger: TGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAA...TCTCAGCTCTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAACAGAAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATTTGACCACCTCCAGATaGTTGAACTGCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDLTTSR*LNCTAS
Trigger: TGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAA...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATTTCTAAGTTCTCTTTaGACAGGGCCTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIFLSSL*TGPQLL
Trigger: CAGCAGCTGAGGCCCTGTCCAAAGAGAACTTAGAAA...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCATTTCTAAGTTCTCTTTaGACAGGGCCTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPFLSSL*TGPQLL
Trigger: CAGCAGCTGAGGCCCTGTCCAAAGAGAACTTAGAAA...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp GGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGCACCAAATGACTGCTTaGTCCCCACTGAAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: GILTPIESTSLSHQMTAWHQMTA*SPLKQC
Trigger: ACACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTG...CCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACTGTCTGCTGAGGGAATaGGGTATTTTGACTCCCATA +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHCLLRE*GILTPI
Trigger: TATGGGAGTCAAAATACCCCATTCCCTCAGCAGACA...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TTTTTGGTGGTTATGGATTACATGTGTGGCCAGCTCATGCTTTTTCTTGAGCAGGAAGCCCAGTCTCTCTaGATAGCTGTACTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: FLVVMDYMCGQLMLFLEQEAQSL*IAVLQV
Trigger: CACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTC...CTGCTCAAGAAAAAGCATGAGCTGGCCACACATGTAATCCATAACCACCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATAACCTGGGTGAAGAGCTaGGATGGTTTTGAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QTTKAMYIAIPTSHILWITWVKS*DGFEWG
Trigger: GCCCCACTCAAAACCATCCCAGCTCTTCACCCAGGT...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTACCTCTAGCTGTGGCTaGGAAGGAGGGGCGGAGCGA +
Preference number: 4 (lower is better)
Translates to: YSFPAILLRYCNTKSNFSTSSCG*EGGAER
Trigger: TCGCTCCGCCCCTCCTTCCCAGCCACAGCTAGAGGT...AGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494474.5
CDS-3UTR TCA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGCTTTCTGATGAATCATaGTCCTGGTGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMLSDES*SWCCGW
Trigger: CCAGCCGCAGCACCAGGATCATGATTCATCAGAAAG...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000623608.3
CDS-3UTR TCA 90 bp CTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGACCTCAAAATCAGGAATaGCAAACTTCTTTCGGAATG +
Preference number: 4 (lower is better)
Translates to: LSIKLAVSSSSSMSWPRGPQNQE*QTSFGM
Trigger: CATTCCGAAAGAAGTTTGTCATTCCTGATTTTGAGG...TCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTTGGAGATGGCATAGGTaGGGGGCTTCACACAGGACT +
Preference number: 4 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIWRWHR*GASHRT
Trigger: AGTCCTGTGTGAAGCCCCTCACCTATGCCATCTCCA...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCTCAATGGCACCAGCATTaGCCATGGGGTTATGGGGGA +
Preference number: 4 (lower is better)
Translates to: SFPAILLRYCNTKSNFSAQWHQH*PWGYGG
Trigger: TCCCCCATAACCCCATGGTCAATGCTGGTGCCATTG...AGCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR TCA 90 bp CTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGATCCCAGCCATTTTGTTaGGATACTGCAACACAAAAT +
Preference number: 4 (lower is better)
Translates to: LSIKLAVSSSSSMSWPRGSQPFC*DTATQN
Trigger: ATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGA...TCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCACAGCAAATAACAGGTTaGCCACAGTCTTGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPQQITG*PQSCSE
Trigger: TTCGGAACAAGACTGTGGTCAACCTGTTATTTGCTG...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATCAGCAAATAACAGGTTaGCCACAGTCTTGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: DMYMCMVARVPPPEYLSHQQITG*PQSCSE
Trigger: TTCGGAACAAGACTGTGGTCAACCTGTTATTTGCTG...ATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTTTTGGTGGTTATGGATTACATGTGTGGCCAGCTCATGCTTTTTCTTGAGCAGAAACCTTCGAAGAGCTaGGACATCGCCACTATAGGC +
Preference number: 4 (lower is better)
Translates to: FLVVMDYMCGQLMLFLEQKPSKS*DIATIG
Trigger: GCCTATAGTGGCGATGTCTCAGCTCTTCGAAGGTTT...CTGCTCAAGAAAAAGCATGAGCTGGCCACACATGTAATCCATAACCACCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCTTCCATATCCATGGCTaGCAAGGCAAACCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSFHIHG*QGKPSK
Trigger: CTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAA...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTTCCATATCCATGGCTaGCAAGGCAAACCTTCGAAG +
Preference number: 4 (lower is better)
Translates to: GILTPIESTSLSHQMTAWFHIHG*QGKPSK
Trigger: CTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAA...CCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTTCGAAGAGCTGAGAAGAGTATCTCTCTCATaGTGGTTTCTTCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SLSVPYPWLTRQTFEELRRVSLS*WFLQGE
Trigger: CTCTCCCTGAAGAAACCATCATGAGAGAGATACTCT...TCTCAGCTCTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAACAGAAAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCAAGAGTATCTCTCTCATaGTGGTTTCTTCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPRVSLS*WFLQGE
Trigger: CTCTCCCTGAAGAAACCATCATGAGAGAGATACTCT...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAAGAGTATCTCTCTCATaGTGGTTTCTTCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQRVSLS*WFLQGE
Trigger: CTCTCCCTGAAGAAACCATCATGAGAGAGATACTCT...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATCCCAGCCATTTTGTTaGGATACTGCAACACTTTCG +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCISQPFC*DTATLS
Trigger: CGAAAGTGTTGCAGTATCTCAACAAAATGGCTGGGA...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479952.5
CDS-3UTR TCA 90 bp ACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGGAAGAGTCCCAGCCATTTTGTTaGGATACTGCAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: THVFIPSHFVEILQHLEESQPFC*DTATPG
Trigger: TCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGA...CTCTTCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR GCA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCCCAGGCGGGACAGCATaGCACTTTCTGATGAATCAT +
Preference number: 4 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCPGGTA*HFLMNH
Trigger: ATGATTCATCAGAAAGTGGCATGCTGTCCCGCCTGG...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000623608.3
CDS-3UTR GCA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTCGAGGATCTGATGTCTaGAGTCCAGTGGCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVARGSDV*SPVAFS
Trigger: ACTAAAGGCCACTGGACTGCAGACATCAGATCCTCG...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR GCA 90 bp TTTTTGGTGGTTATGGATTACATGTGTGGCCAGCTCATGCTTTTTCTTGAGCAGTGTGCACGTAGTCAGTaGCTAGGGTGCTTATGGAGA +
Preference number: 4 (lower is better)
Translates to: FLVVMDYMCGQLMLFLEQCARSQ*LGCLWR
Trigger: TCTCCATAAGCACCCTAGGCACTGACTACGTGCACA...CTGCTCAAGAAAAAGCATGAGCTGGCCACACATGTAATCCATAACCACCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AAACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGGAAGTGTGCACGTAGTCAGTaGCTAGGGTGCTTATGGAGA +
Preference number: 4 (lower is better)
Translates to: KPMYSFPAILLRYCNTWKCARSQ*LGCLWR
Trigger: TCTCCATAAGCACCCTAGGCACTGACTACGTGCACA...CTTCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR GCA 90 bp CACAAAATACTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGCTTGTTCCGAATTTCTaGCCCTTCACGCCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: HKILSLSIKLAVSSSSSMLVPNF*PFTPWV
Trigger: GACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAG...CATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAGTATTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CACAAAATACTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCAGCTGCAGCAACATaGAGAGCTGTGCGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: HKILSLSIKLAVSSSSSMSAAAT*RAVRES
Trigger: TGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTGA...CATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAGTATTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CAGTTTGACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTCAAAAGGATTCACTTTaGAAGCCTCGATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: QFDHLQMVELHSIIQGNVQKDSL*KPRSGI
Trigger: AATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTG...AACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCATCCAGGGGAATGTTaGCCCACCTGTCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIHPGEC*PTCPWQ
Trigger: TTGCCAAGGACAGGTGGGGCAACATTCCCCTGGATG...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGTGTGTGGCCAGCTCATaGTTTTTCTTGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMCVASS*FFLSRG
Trigger: GCCCCTGCTCAAGAAAAAGCATGAGCTGGCCACACA...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCAGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGTGGATATGTACATGTaGATGGTAGCTAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPVDMYM*MVARVP
Trigger: AGGGACTCTAGCTACCATGCACATGTACATATCCAC...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATAAGATGCGATCCACATaGCCCGTGAACTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYKMRST*PVNSSK
Trigger: TTTTGAGGAGTTCACGGGCCATGTGGATCGCATCTT...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATAGTACCACCAGGAGGATaGCTCCTGATACAGCTGACT +
Preference number: 4 (lower is better)
Translates to: QTTKAMYIAIPTSHILWIVPPGG*LLIQLT
Trigger: AGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTAC...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTTGGGATGGTTTTGAGTaGGGCAAGCCATTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVAWDGFE*GKPLGC
Trigger: ACAGCCTAATGGCTTGCCCCACTCAAAACCATCCCA...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR CAA 72 bp TTCTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACTAGCCTAAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: FSVLCLLREWGI*TPIESTSLSHQ
Trigger: TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CACAAAATACTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGCTTTCTGATGAATCATaGTCCTGGTGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: HKILSLSIKLAVSSSSSMLSDES*SWCCGW
Trigger: CCAGCCGCAGCACCAGGATCATGATTCATCAGAAAG...CATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAGTATTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000623608.3
CDS-3UTR TCA 90 bp TCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCCCAGCCATTTTGTTaGGATACTGCAACACAAAAT +
Preference number: 4 (lower is better)
Translates to: SVDMYMCMVARVPPPEYLSQPFC*DTATQN
Trigger: ATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGA...GAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGGGAATGTGGCATTGCTaGAACCCATGTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWGMWHC*NPCIHS
Trigger: GGAATGAATACATGGGTTTCAGCAATGCCACATTCC...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCAAGCACTTCTTTTCCTTaGGATAATAGCCGATGGCAT +
Preference number: 4 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPSTSFP*DNSRWH
Trigger: ATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGCT...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTGCTGAAACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACATGCCTGATTCACAAGTaGCCTCCACAGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: LLKPMYSFPAILLRYCNTCLIHK*PPQNTA
Trigger: AGCTGTGTTCTGTGGAGGTCACTTGTGAATCAGGCA...TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTTCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424141.6
CDS-3UTR TCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGCCTGATTCACAAGTaGCCTCCACAGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: QTTKAMYIAIPTSHILWICLIHK*PPQNTA
Trigger: AGCTGTGTTCTGTGGAGGTCACTTGTGAATCAGGCA...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTACATAGTTGTGGAAATTaGAGAGAGACACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LCLLREWGILTPIESTSLHSCGN*RETPTS
Trigger: AGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATG...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCATAGTTGTGGAAATTaGAGAGAGACACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHHSCGN*RETPTS
Trigger: AGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATG...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AAAATCAGGAATGACAAACTTCTTTCGGAATGCCTGGGTCAGGAGCACAATGTTGGAGCACAATGTTGCTaGTCACACACTTTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: KIRNDKLLSECLGQEHNVGAQCC*SHTFGR
Trigger: TCTTCCGAAAGTGTGTGAGCAGCAACATTGTGCTCC...AACATTGTGCTCCTGACCCAGGCATTCCGAAAGAAGTTTGTCATTCCTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR GCA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTCAACATGCAGAGCTGTaGGCGAGTCATAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVAQHAEL*ASHSLS
Trigger: AGAAAGACTATGACTCGCGCACAGCTCTGCATGTTG...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATAGATGTGTCCTTCAGCTaGAGCAACATGCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QTTKAMYIAIPTSHILWIDVSFS*SNMQSC
Trigger: ACAGCTCTGCATGTTGCTGCAGCTGAAGGACACATC...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACCAAAAGGATTCACTTTaGAAGCCTCGATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: LCTLSAEGMGYFDSHRKHQKDSL*KPRSGI
Trigger: AATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTG...GTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAAAGGATTCACTTTaGAAGCCTCGATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: LLREWGILTPIESTSLSHQKDSL*KPRSGI
Trigger: AATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTG...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCAAGTCACCAAATGACTaGTTGGTCCCCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCKSPND*LVPTEA
Trigger: TGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTT...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTAAGTCACCAAATGACTaGTTGGTCCCCACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTKSPND*LVPTEA
Trigger: TGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTT...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp TTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGATTTTGTTGAGATACTaGAACACCTGGAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LALCPQTCARSQCLGCLWILLRY*NTWKRK
Trigger: TTTTCTCTTCCAGGTGTTGCAGTATCTCAACAAAAT...CCATAAGCACCCTAGGCACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CCA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCGCAGTGGTGAACTTGTaGATAGGGATTCGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCAVVNL*IGIRSC
Trigger: ACAGGAACGAATCCCTATCCACAAGTTCACCACTGC...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CCA 90 bp TTCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCGTAGCGCAGGCCACTTaGCTCTTTGCCCACAAACTT +
Preference number: 4 (lower is better)
Translates to: FIPSHFVEILQHKIKLLCVAQAT*LFAHKL
Trigger: AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTAC...GCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR CCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGTTTCCTTCTCTGACTaGAATGTGGCATTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPVSFSD*NVALLK
Trigger: TTTCAGCAATGCCACATTCCAGTCAGAGAAGGAAAC...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTTTGACCACCTCCAGATaGTTGAACTGCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVALTTSR*LNCTAS
Trigger: TGATGCTGTGCAGTTCAACCATCTGGAGGTGGTCAA...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTTTTCTAAGTTCTCTTTaGACAGGGCCTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVAFLSSL*TGPQLL
Trigger: CAGCAGCTGAGGCCCTGTCCAAAGAGAACTTAGAAA...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTTTCTAAGTTCTCTTTaGACAGGGCCTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTFLSSL*TGPQLL
Trigger: CAGCAGCTGAGGCCCTGTCCAAAGAGAACTTAGAAA...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTGAAGCCCAGTCTCTCTaGATAGCTGTACTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIEAQSL*IAVLQV
Trigger: CACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTC...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GTGCCTCAGGTTGTCATAGTTGTGGAAATTGAAGAGAGACACCAACTTCTGGCACCTCAAAATCAGGAATaGCAAACTTCTTTCGGAATG +
Preference number: 4 (lower is better)
Translates to: VPQVVIVVEIEERHQLLAPQNQE*QTSFGM
Trigger: CATTCCGAAAGAAGTTTGTCATTCCTGATTTTGAGG...TGCCAGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATGACAACCTGAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000539272.5
CDS-3UTR TCA 90 bp TATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTTGGAGATGGCATAGGTaGGGGGCTTCACACAGGACT +
Preference number: 4 (lower is better)
Translates to: YSFPAILLRYCNTKSNFSWRWHR*GASHRT
Trigger: AGTCCTGTGTGAAGCCCCTCACCTATGCCATCTCCA...AGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR TCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATCCCAGCCATTTTGTTaGGATACTGCAACACAAAAT +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCISQPFC*DTATQN
Trigger: ATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGA...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCATCCCAGCCATTTTGTTaGGATACTGCAACACAAAAT +
Preference number: 4 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPSQPFC*DTATQN
Trigger: ATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGA...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAATCCCAGCCATTTTGTTaGGATACTGCAACACAAAAT +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQSQPFC*DTATQN
Trigger: ATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGA...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GCACTTCTTTTCCTTGAGATAATAGCCGATGGCATAATTCCGATCCCCTGTTTCAGCACTTCTTTTCCTTaGGATAATAGCCGATGGCAT +
Preference number: 4 (lower is better)
Translates to: ALLFLEIIADGIIPIPCFSTSFP*DNSRWH
Trigger: ATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGCT...GAAACAGGGGATCGGAATTATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
ENST00000494474.5
CDS-3UTR TCA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGAGCACTTCTTTTCCTTaGGATAATAGCCGATGGCAT +
Preference number: 4 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWSTSFP*DNSRWH
Trigger: ATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGCT...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTTGCCTGATTCACAAGTaGCCTCCACAGAACACAGCT +
Preference number: 4 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHICLIHK*PPQNTA
Trigger: AGCTGTGTTCTGTGGAGGTCACTTGTGAATCAGGCA...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCACATAGTTGTGGAAATTaGAGAGAGACACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPHSCGN*RETPTS
Trigger: AGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATG...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp CACAAAATACTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGAAACCTTCGAAGAGCTaGGACATCGCCACTATAGGC +
Preference number: 4 (lower is better)
Translates to: HKILSLSIKLAVSSSSSMKPSKS*DIATIG
Trigger: GCCTATAGTGGCGATGTCTCAGCTCTTCGAAGGTTT...CATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAGTATTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR GCA 90 bp CACAAAATACTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGCCAGGCGGGACAGCATaGCACTTTCTGATGAATCAT +
Preference number: 4 (lower is better)
Translates to: HKILSLSIKLAVSSSSSMPGGTA*HFLMNH
Trigger: ATGATTCATCAGAAAGTGGCATGCTGTCCCGCCTGG...CATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAGTATTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000623608.3
CDS-3UTR GCA 90 bp TCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCTCGAGGATCTGATGTCTaGAGTCCAGTGGCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: SFPAILLRYCNTKSNFSARGSDV*SPVAFS
Trigger: ACTAAAGGCCACTGGACTGCAGACATCAGATCCTCG...AGCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424141.6
CDS-3UTR GCA 90 bp GTGCCTCAGGTTGTCATAGTTGTGGAAATTGAAGAGAGACACCAACTTCTGGCACAAAAGGATTCACTTTaGAAGCCTCGATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: VPQVVIVVEIEERHQLLAQKDSL*KPRSGI
Trigger: AATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTG...TGCCAGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATGACAACCTGAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR GCA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAACAAAAGGATTCACTTTaGAAGCCTCGATCAGGAATT +
Preference number: 4 (lower is better)
Translates to: LREWGILTPIESTSLSHQQKDSL*KPRSGI
Trigger: AATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTG...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ATCAAACTTCTCTGCTTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATGCAGTGGTGAACTTGTaGATAGGGATTCGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: IKLLCFVTVHLDQGADNNAVVNL*IGIRSC
Trigger: ACAGGAACGAATCCCTATCCACAAGTTCACCACTGC...ATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000486896.5
CDS-3UTR CCA 90 bp ATCAAACTTCTCTGCTTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATAAGATGCGATCCACATaGCCCGTGAACTCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: IKLLCFVTVHLDQGADNNKMRST*PVNSSK
Trigger: TTTTGAGGAGTTCACGGGCCATGTGGATCGCATCTT...ATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CCA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCATATTTTTGGTGGTTATaGATTACATGTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPYFWWL*ITCVAS
Trigger: GCTGGCCACACATGTAATCCATAACCACCAAAAATA...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATATTTTTGGTGGTTATaGATTACATGTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIYFWWL*ITCVAS
Trigger: GCTGGCCACACATGTAATCCATAACCACCAAAAATA...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CCA 90 bp ATCAAACTTCTCTGCTTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATATAAGGCTTCTAGTATaGGCTGGTGCACCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: IKLLCFVTVHLDQGADNNIRLLV*AGAPGS
Trigger: ACTACCAGGTGCACCAGCCCATACTAGAAGCCTTAT...ATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR TCA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGCACTTCTTTTCCTTaGGATAATAGCCGATGGCAT +
Preference number: 4 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVASTSFP*DNSRWH
Trigger: ATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGCT...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp GGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGCATAGTTGTGGAAATTaGAGAGAGACACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: GILTPIESTSLSHQMTAWHSCGN*RETPTS
Trigger: AGAAGTTGGTGTCTCTCTTCAATTTCCACAACTATG...CCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp ATCAAACTTCTCTGCTTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATACCCAATTTAGTACTTaGAGTTGGAGGAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: IKLLCFVTVHLDQGADNNTQFST*SWRSGC
Trigger: ACACCCACTCCTCCAACTTCAAGTACTAAATTGGGT...ATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR GCA 90 bp TGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATATTTTGTTGAGATACTaGAACACTTTCGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: CSNMQSCARVIVFLFHIHILLRY*NTFGRD
Trigger: ATCTCTTCCGAAAGTGTTGCAGTATCTCAACAAAAT...ATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479952.5
3UTR CAA 72 bp GTAGCAAGGGAACTTACAAAATCAAACTTCTCTGCTTaGTTACAGTCCATCTTGATCAGGGAGCTGACAACA +
Preference number: 4 (lower is better)
Translates to: VARELTKSNFSA*LQSILIRELTT
Trigger: TGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGATTTTGTAAGTTCCCTTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR TCA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGAGCACTTCTTTTCCTTaGGATAATAGCCGATGGCAT +
Preference number: 4 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMSTSFP*DNSRWH
Trigger: ATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGCT...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCAGCAAATAACAGGTTaGCCACAGTCTTGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIQQITG*PQSCSE
Trigger: TTCGGAACAAGACTGTGGTCAACCTGTTATTTGCTG...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR TCA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTAAGCAGTGGCATTGCTaGAACCCATGTATTCATTCC +
Preference number: 4 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIKQWHC*NPCIHS
Trigger: GGAATGAATACATGGGTTTCAGCAATGCCACTGCTT...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479952.5
ENST00000539272.5
CDS-3UTR CCA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTATTTTTGGTGGTTATaGATTACATGTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTYFWWL*ITCVAS
Trigger: GCTGGCCACACATGTAATCCATAACCACCAAAAATA...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
3UTR CAA 72 bp TTGAGATACTGCAACACAAAATCAAACTTCTCTGCTTaGTTACAGTCCATCTTGATCAGGGAGCTGACAACA +
Preference number: 4 (lower is better)
Translates to: LRYCNTKSNFSA*LQSILIRELTT
Trigger: TGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
3UTR CAA 72 bp TTGCTGAAACCCATGTATTCATTCCCAGCCATTTTGTaGAGATACTGCAACACAAAATCAAACTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLKPMYSFPAIL*RYCNTKSNFSA
Trigger: AGCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTTCAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
3UTR CAA 72 bp GCATTGCTGAAACCCATGTATTCATTCCCAGCCATTTaGTTGAGATACTGCAACACAAAATCAAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: ALLKPMYSFPAI*LRYCNTKSNFS
Trigger: AGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTTCAGCAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS TCA 90 bp GCTGGTGGCTGTGTGGCGTCTCTCTGCCCTGCGCCGCGGCCTCACTaGGGTGGTGCCGGACGCCCCCGCCAAGGAGGGGGCTCCGGCTCG +
Preference number: 5 (lower is better)
Translates to: AGGCVASLCPAPRPH*GGAGRPRQGGGSGS
Trigger: CGAGCCGGAGCCCCCTCCTTGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGCGGCGCAGGGCAGAGAGACGCCACACAGCCACCAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000461077.1
ENST00000471282.5
ENST00000479952.5
ENST00000483347.1
ENST00000486433.5
ENST00000486896.5
ENST00000494345.5
ENST00000494474.5
ENST00000610413.4
ENST00000623608.3
CDS CCA 90 bp CGGAGCGAGCGAGACAAGGTGCGGGGGAGTTCTGTGAGGGAGCGCTaGACCTGGAAGACGGAGAATGTGGGCCCGGTGGGTGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: RSERDKVRGSSVRER*TWKTENVGPVGGAG
Trigger: CCCAGCCCCACCCACCGGGCCCACATTCTCCGTCTTCCAGGTCCAGCGCTCCCTCACAGAACTCCCCCGCACCTTGTCTCGCTCGCTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000471282.5
ENST00000483347.1
ENST00000486433.5
ENST00000494345.5
ENST00000494474.5
ENST00000610413.4
ENST00000623608.3
CDS CCA 90 bp CAGTGGCCTTTAGTGCTGATCCTGGTGCTGCGGCTGGTGGCTGTGTaGCGTCTCTCTGCCCTGCGCCGCGGCCTCACTGAGGTGGTGCCG +
Preference number: 5 (lower is better)
Translates to: QWPLVLILVLRLVAV*RLSALRRGLTEVVP
Trigger: CGGCACCACCTCAGTGAGGCCGCGGCGCAGGGCAGAGAGACGCCACACAGCCACCAGCCGCAGCACCAGGATCAGCACTAAAGGCCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS CCA 90 bp CATCCACAGTGCACAGGGAGACACCCCACAGGTCTGGGTTTGACTTaGCCAGCTGAGGGATGTAGGCTGCCACTGATCCTGGTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: HPQCTGRHPTGLGLT*PAEGCRLPLILVLR
Trigger: CCGCAGCACCAGGATCAGTGGCAGCCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGGGTGTCTCCCTGTGCACTGTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494474.5
ENST00000610413.4
CDS-3UTR CAA 90 bp CATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACTTGGCTGGCAGGCCCTGATACAGCTGACTaGGCTGGCAGGCCCACGTGG +
Preference number: 5 (lower is better)
Translates to: HWVPPGGWLLIQLTWLAGPDTAD*AGRPTW
Trigger: CCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAGG...GCCTGCCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS GCA 90 bp CGGTGCATCTCGCTCATGCAGTCTCGGAGCCGAGGATCTGATGTCTaGAGTCCAGTGGCCTTTAGTGCTGATCCTGGTGCTGCGGCTGGT +
Preference number: 5 (lower is better)
Translates to: RCISLMQSRSRGSDV*SPVAFSADPGAAAG
Trigger: ACCAGCCGCAGCACCAGGATCAGCACTAAAGGCCACTGGACTGCAGACATCAGATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CAA 90 bp CGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGTGGCTGTTCCCCAGCTaGTCCAATGGGGGTGACAGG +
Preference number: 5 (lower is better)
Translates to: RISAPSRRGSNFRAQCLRWLFPS*SNGGDR
Trigger: CCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCA...CCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS CCA 90 bp GCTGCCACTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTaGACTCTTGGACCACGCGGTGCATCTCGCTCATGCAGTCTCGGA +
Preference number: 5 (lower is better)
Translates to: AATFGRDLGPRGHHY*TLGPRGASRSCSLG
Trigger: TCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAGTGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000623608.3
CDS CCA 90 bp GCCCTCACTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTaGACTCTTGGACCACGCGGTGCATCTCGCTCATGCAGTCTCGGA +
Preference number: 5 (lower is better)
Translates to: ALTFGRDLGPRGHHY*TLGPRGASRSCSLG
Trigger: TCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAGTGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471282.5
ENST00000491880.1
CDS-3UTR CAA 90 bp GAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATACCACTACTGGACTCTaGGACCACGCGGTGCATCTC +
Preference number: 5 (lower is better)
Translates to: EISVQEATTTGLLDHAVHTTTGL*DHAVHL
Trigger: GAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGT...ATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CAA 90 bp GAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGTCCCACAGGTCTGGGTTaGACTTGGCCAGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: EFLPLHAVGLTSEHSASGPTGLG*TWPAEG
Trigger: TCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGG...ACCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp ATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACGGGCAGATCCCACCGTaGGCGAGGGTGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: IIPMTLGTTRRMAPDTADGQIPP*ARVAAM
Trigger: CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCC...GTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGTCATGGGAATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp CTATGGCTGTTCCCCAGCTTGTCCAATGGGGGTGACAGGCACATCATTCCCATGCCTGATACAGCTGACTaGGCTGGCAGGCCCACGTGG +
Preference number: 5 (lower is better)
Translates to: LWLFPSLSNGGDRHIIPMPDTAD*AGRPTW
Trigger: CCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAGG...CATGGGAATGATGTGCCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS TCA 90 bp TTGACCATCCACAGTGCACAGGGAGACACCCCACAGGTCTGGGTTTaGCTTGGCCAGCTGAGGGATGTAGGCTGCCACTTTGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: LTIHSAQGDTPQVWV*LGQLRDVGCHFASS
Trigger: ACTGGAGGCAAAGTGGCAGCCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGGGTGTCTCCCTGTGCACTGTGGATGGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000486896.5
ENST00000494345.5
ENST00000539272.5
CDS CCA 90 bp CATCCACAGTGCACAGGGAGACACCCCACAGGTCTGGGTTTGACTTaGCCAGCTGAGGGATGTAGGCTGCCACTTTCGGAAGAGATCTCG +
Preference number: 5 (lower is better)
Translates to: HPQCTGRHPTGLGLT*PAEGCRLPLSEEIS
Trigger: CGAGATCTCTTCCGAAAGTGGCAGCCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGGGTGTCTCCCTGTGCACTGTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000623608.3
CDS CCA 90 bp CGGAATGCTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTaGACTCTTGGACCACGCGGTGCATCTCGCTCATGCAGTCTCGGA +
Preference number: 5 (lower is better)
Translates to: RNAFGRDLGPRGHHY*TLGPRGASRSCSLG
Trigger: TCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAGCATTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CAA 90 bp CTATGGCTGTTCCCCAGCTTGTCCAATGGGGGTGACAGGCACATCATTCCCATGCCCACAGGTCTGGGTTaGACTTGGCCAGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: LWLFPSLSNGGDRHIIPMPTGLG*TWPAEG
Trigger: TCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGG...CATGGGAATGATGTGCCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp GGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGCAGCCCACAGAGTGCCGTaGACCATCCACAGTGCACAG +
Preference number: 5 (lower is better)
Translates to: GRACCSAGHLALCPQTCAAHRVP*TIHSAQ
Trigger: CTGTGCACTGTGGATGGTCAACGGCACTCTGTGGGC...TGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS TCA 90 bp TTGACCATCCACAGTGCACAGGGAGACACCCCACAGGTCTGGGTTTaGCTTGGCCAGCTGAGGGATGTAGGCTGCCACTTTCGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LTIHSAQGDTPQVWV*LGQLRDVGCHFRKR
Trigger: TCTCTTCCGAAAGTGGCAGCCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGGGTGTCTCCCTGTGCACTGTGGATGGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000623608.3
CDS GCA 90 bp CGGTGCATCTCGCTCATGCAGTCTCGGAGCCGAGGATCTGATGTCTaGAGTCCAGTGGCCTTTAGTGCAGTGGTGAACTTGTGGATAGGG +
Preference number: 5 (lower is better)
Translates to: RCISLMQSRSRGSDV*SPVAFSAVVNLWIG
Trigger: CCCTATCCACAAGTTCACCACTGCACTAAAGGCCACTGGACTGCAGACATCAGATCCTCGGCTCCGAGACTGCATGAGCGAGATGCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000461077.1
ENST00000471282.5
ENST00000479952.5
ENST00000486433.5
ENST00000486896.5
ENST00000491880.1
ENST00000494345.5
ENST00000539272.5
ENST00000623608.3
CDS CCA 90 bp CAGTCCATTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTaGACTCTTGGACCACGCGGTGCATCTCGCTCATGCAGTCTCGGA +
Preference number: 5 (lower is better)
Translates to: QSIFGRDLGPRGHHY*TLGPRGASRSCSLG
Trigger: TCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAATGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461077.1
CDS CCA 90 bp TGCAACACTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTaGACTCTTGGACCACGCGGTGCATCTCGCTCATGCAGTCTCGGA +
Preference number: 5 (lower is better)
Translates to: CNTFGRDLGPRGHHY*TLGPRGASRSCSLG
Trigger: TCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAGTGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479952.5
CDS-3UTR CAA 90 bp AAGAGGCCACCACTACTGGACTCTTGGACCACGCGGTGCATCTCGCTCATGCAGGTCAGGAGCACAATGTaGCTGCTCACACACTTTCGG +
Preference number: 5 (lower is better)
Translates to: KRPPLLDSWTTRCISLMQVRSTM*LLTHFR
Trigger: CCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGAC...CTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CAA 90 bp ATGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCGTCAGGAGCACAATGTaGCTGCTCACACACTTTCGG +
Preference number: 5 (lower is better)
Translates to: MHEAEGVAHCFSTQHTLAVRSTM*LLTHFR
Trigger: CCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGAC...GGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp CCTCCAGTGAGCTCTTTGACATCCTCAAAGATGCGATCCACATGGCCCGTGAACCCCACAGGTCTGGGTTaGACTTGGCCAGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: PPVSSLTSSKMRSTWPVNPTGLG*TWPAEG
Trigger: TCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGG...GTTCACGGGCCATGTGGATCGCATCTTTGAGGATGTCAAAGAGCTCACTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CAA 90 bp ACAGTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCAGCCCACAGAGTGCCGTaGACCATCCACAGTGCACAG +
Preference number: 5 (lower is better)
Translates to: TVLFRISAPSRRGSNFRAAHRVP*TIHSAQ
Trigger: CTGTGCACTGTGGATGGTCAACGGCACTCTGTGGGC...TGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp GCAAGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACGGGCAGATCCCACCGTaGGCGAGGGTGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: ASLDQEFNNFDVSFSCSNGQIPP*ARVAAM
Trigger: CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCC...GTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp TTGACCACAGTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCCTGATACAGCTGACTaGGCTGGCAGGCCCACGTGG +
Preference number: 5 (lower is better)
Translates to: LTTVLFRISAPSRRGSNFPDTAD*AGRPTW
Trigger: CCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAGG...GAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGTGGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp TGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTACCACCTCCAGATGGTaGAACTGCACAGCATCATCC +
Preference number: 5 (lower is better)
Translates to: CMRLRVLRTASALSTLSPTTSRW*NCTASS
Trigger: GGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGT...AGGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp AGGCTTCTAGTATGGGCTGGTGCACCTGGTAGTGGGGTTAGAGAGCCACTGGGGAGTGCAGTGGTGAACTaGTGGATAGGGATTCGTTCC +
Preference number: 5 (lower is better)
Translates to: RLLVWAGAPGSGVREPLGSAVVN*WIGIRS
Trigger: GGAACGAATCCCTATCCACAAGTTCACCACTGCACT...CCCCAGTGGCTCTCTAACCCCACTACCAGGTGCACCAGCCCATACTAGAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CAA 90 bp AGAACACAGCTGGAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGACCACTACTGGACTCTaGGACCACGCGGTGCATCTC +
Preference number: 5 (lower is better)
Translates to: RTQLEVEIKGSHHVHPLRTTTGL*DHAVHL
Trigger: GAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGT...CCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTCCAGCTGTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
CDS-3UTR CAA 90 bp CCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTGGGCCCACAGGTCTGGGTTaGACTTGGCCAGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: PEYLSHDGFFRERKRRPGPTGLG*TWPAEG
Trigger: TCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGG...CCCAGGTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TACCTTGAAGCCCAGTCTCTCTGGATAGCTGTACTGCAGGTGTCCTCTGAGGCCTGTAGCGCAGGCCACTaGGCTCTTTGCCCACAAACT +
Preference number: 5 (lower is better)
Translates to: YLEAQSLWIAVLQVSSEACSAGH*ALCPQT
Trigger: AGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACA...GGCCTCAGAGGACACCTGCAGTACAGCTATCCAGAGAGACTGGGCTTCAAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAGGGCAGATCCCACCGTaGGCGAGGGTGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: LREWGILTPIESTSLSHQGQIPP*ARVAAM
Trigger: CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCC...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGGGCAGATCCCACCGTaGGCGAGGGTGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPGQIPP*ARVAAM
Trigger: CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCC...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGATGATGAGGCTGAGGGTGTaGCGCACTGCTTCAGCACTC +
Preference number: 5 (lower is better)
Translates to: NGGDRHIIPMTLGTTRRMMRLRV*RTASAL
Trigger: GAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCAT...CATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp CTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCCTGATACAGCTGACTaGGCTGGCAGGCCCACGTGG +
Preference number: 5 (lower is better)
Translates to: LHQSISLMMVSSGRGRGDPDTAD*AGRPTW
Trigger: CCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAGG...GTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGTCCACTGATGAATCACTGTTaGGGGGCAGAGAATGGGGAG +
Preference number: 5 (lower is better)
Translates to: TPTSGRSWSPYGCSPACPLMNHC*GAENGE
Trigger: CTCCCCATTCTCTGCCCCCAAACAGTGATTCATCAG...TGGACAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000539272.5
CDS TCA 90 bp TGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGAGATGGCATAGGTaGGGGGCTTCACACAGGACTGCAGGCAGAAGGGGATCTTTGTGT +
Preference number: 5 (lower is better)
Translates to: CARSQCLGCLWRWHR*GASHRTAGRRGSLC
Trigger: ACACAAAGATCCCCTTCTGCCTGCAGTCCTGTGTGAAGCCCCTCACCTATGCCATCTCCATAAGCACCCTAGGCACTGACTACGTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
ENST00000494345.5
ENST00000494474.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AGAGACACCAACTTCTGGCAGAAGCTGGTCCCCCTATGGCTGTTCCCCAGCTTGAGTGCAGTGGTGAACTaGTGGATAGGGATTCGTTCC +
Preference number: 5 (lower is better)
Translates to: RDTNFWQKLVPLWLFPSLSAVVN*WIGIRS
Trigger: GGAACGAATCCCTATCCACAAGTTCACCACTGCACT...CAAGCTGGGGAACAGCCATAGGGGGACCAGCTTCTGCCAGAAGTTGGTGTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp GAATGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTCCAGTGAGCTCTTaGACATCCTCAAAGATGCGA +
Preference number: 5 (lower is better)
Translates to: ECMRLRVLRTASALSTLSPPVSS*TSSKMR
Trigger: TCGCATCTTTGAGGATGTCAAAGAGCTCACTGGAGG...CGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGGCCACTTGGCTCTTaGCCCACAAACTTGTGCACG +
Preference number: 5 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSRPLGS*PTNLCT
Trigger: CGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCT...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCTGTAGCGCAGGCCACTaGGCTCTTTGCCCACAAACT +
Preference number: 5 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSCSAGH*ALCPQT
Trigger: AGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACA...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACTTGGCTGGCAGGCCCTTGTTACAGTCCATCTaGATCAGGGAGCTGACAACA +
Preference number: 5 (lower is better)
Translates to: LGTTRRMAPDTADLAGRPLLQSI*IRELTT
Trigger: TGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAA...GGGCCTGCCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGGGGCAGATCCCACCGTaGGCGAGGGTGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWGQIPP*ARVAAM
Trigger: CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCC...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCACAGTGCCTCAGGGCAGCAAATAACAGGTaGACCACAGTCTTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: RISAPSRRGSNFRAQCLRAANNR*TTVLFR
Trigger: TCGGAACAAGACTGTGGTCAACCTGTTATTTGCTGC...CCTGAGGCACTGTGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp TTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACTTGGCTGGCAGGCCCGCAAAAGGATTCACTTaGCAAGCCTCGATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LGTTRRMAPDTADLAGRPAKGFT*QASIRN
Trigger: ATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTGC...GGGCCTGCCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp ACATTGGGTACCACCAGGAGGATGGCTCCTGATACAGCTGACTTGGCTGGCAGGTTGCCCCACCTGTCCTaGGCAAAAGGATTCACTTTG +
Preference number: 5 (lower is better)
Translates to: TLGTTRRMAPDTADLAGRLPHLS*AKGFTL
Trigger: CAAAGTGAATCCTTTTGCCAAGGACAGGTGGGGCAA...CCTGCCAGCCAAGTCAGCTGTATCAGGAGCCATCCTCCTGGTGGTACCCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp ATTGAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTTCATCCAGGGGAATGTaGCCCCACCTGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: IEGELVVAQATWLFAHKLSSRGM*PHLSLA
Trigger: TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGA...AAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424141.6
CDS-3UTR CAA 90 bp TCCAATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGTCACCAAATGACTGCTaGGTCCCCACTGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: SNGGDRHIIPMTLGTTRRSPNDC*VPTEAV
Trigger: CACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGA...CCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp TTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGGCCCACAGAGTGCCGTaGACCATCCACAGTGCACAG +
Preference number: 5 (lower is better)
Translates to: LQSILIRELTTMAPALTMAHRVP*TIHSAQ
Trigger: CTGTGCACTGTGGATGGTCAACGGCACTCTGTGGGC...CATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CAA 90 bp TTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGAGGCCACTTGGCTCTTaGCCCACAAACTTGTGCACG +
Preference number: 5 (lower is better)
Translates to: LALCPQTCARSQCLGCLWRPLGS*PTNLCT
Trigger: CGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCT...CCATAAGCACCCTAGGCACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CAA 90 bp TTGGCTCTTTGCCCACAAACTTGTGCACGTAGTCAGTGCCTAGGGTGCTTATGGTGTAGCGCAGGCCACTaGGCTCTTTGCCCACAAACT +
Preference number: 5 (lower is better)
Translates to: LALCPQTCARSQCLGCLWCSAGH*ALCPQT
Trigger: AGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACA...CCATAAGCACCCTAGGCACTGACTACGTGCACAAGTTTGTGGGCAAAGAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CAA 90 bp TGCATGAGGCTGAGGGTGTTGCGCACTGCTTCAGCACTCAGCACACTCTCGCCTTTGTTACAGTCCATCTaGATCAGGGAGCTGACAACA +
Preference number: 5 (lower is better)
Translates to: CMRLRVLRTASALSTLSPLLQSI*IRELTT
Trigger: TGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAA...AGGCGAGAGTGTGCTGAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp CAGCTGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATATGAGGCTGAGGGTGTaGCGCACTGCTTCAGCACTC +
Preference number: 5 (lower is better)
Translates to: QLQQHAELCASHSLSVPYMRLRV*RTASAL
Trigger: GAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCAT...ATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAACCTGATACAGCTGACTaGGCTGGCAGGCCCACGTGG +
Preference number: 5 (lower is better)
Translates to: LREWGILTPIESTSLSHQPDTAD*AGRPTW
Trigger: CCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAGG...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACTGGCTGTTCCCCAGCTaGTCCAATGGGGGTGACAGG +
Preference number: 5 (lower is better)
Translates to: LLREWGILTPIESTSLSHWLFPS*SNGGDR
Trigger: CCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCA...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCATTGCCCCACCTGTCCTaGGCAAAAGGATTCACTTTG +
Preference number: 5 (lower is better)
Translates to: DHLQMVELHSIIQGNVAPLPHLS*AKGFTL
Trigger: CAAAGTGAATCCTTTTGCCAAGGACAGGTGGGGCAA...TGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp CTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGATCATCCAGGGGAATGTaGCCCCACCTGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LESLHQSISLMMVSSGRGSSRGM*PHLSLA
Trigger: TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGA...TCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCACCTGTCCTTGGCAGGAGTCCTGGTAATCTaGAAGCAGTTTGACCACCTC +
Preference number: 5 (lower is better)
Translates to: WLNCTASSRGMLPHLSLAGVLVI*KQFDHL
Trigger: GAGGTGGTCAAACTGCTTCAAGATTACCAGGACTCC...TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp ACAGTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCGAGCAAGTGCAGTGGTGAACTaGTGGATAGGGATTCGTTCC +
Preference number: 5 (lower is better)
Translates to: TVLFRISAPSRRGSNFRASAVVN*WIGIRS
Trigger: GGAACGAATCCCTATCCACAAGTTCACCACTGCACT...TGCTCGGAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp GTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCACCACTACTGGACTCTaGGACCACGCGGTGCATCTC +
Preference number: 5 (lower is better)
Translates to: VLCLLREWGILTPIESTSTTTGL*DHAVHL
Trigger: GAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGT...GCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CAA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCCCTCCAGTGAGCTCTTaGACATCCTCAAAGATGCGA +
Preference number: 5 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSPPVSS*TSSKMR
Trigger: TCGCATCTTTGAGGATGTCAAAGAGCTCACTGGAGG...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCCACAGGTCTGGGTTaGACTTGGCCAGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPPTGLG*TWPAEG
Trigger: TCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGG...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAGCCCACAGAGTGCCGTaGACCATCCACAGTGCACAG +
Preference number: 5 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPAHRVP*TIHSAQ
Trigger: CTGTGCACTGTGGATGGTCAACGGCACTCTGTGGGC...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCAGCCCACAGAGTGCCGTaGACCATCCACAGTGCACAG +
Preference number: 5 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPAHRVP*TIHSAQ
Trigger: CTGTGCACTGTGGATGGTCAACGGCACTCTGTGGGC...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAGCCCACAGAGTGCCGTaGACCATCCACAGTGCACAG +
Preference number: 5 (lower is better)
Translates to: LREWGILTPIESTSLSHQAHRVP*TIHSAQ
Trigger: CTGTGCACTGTGGATGGTCAACGGCACTCTGTGGGC...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTTCCTTGAGGCCACTTGGCTCTTaGCCCACAAACTTGTGCACG +
Preference number: 5 (lower is better)
Translates to: RSRAAIMSTPLGKHFFSLRPLGS*PTNLCT
Trigger: CGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCT...CAAGGAAAAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CAA 90 bp ATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGGGGTTATGGTGTAGCGCAGGCCACTaGGCTCTTTGCCCACAAACT +
Preference number: 5 (lower is better)
Translates to: ILIRELTTMAPALTMGLWCSAGH*ALCPQT
Trigger: AGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACA...CCATAACCCCATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CAA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATAGGGCAGATCCCACCGTaGGCGAGGGTGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: QTTKAMYIAIPTSHILWIGQIPP*ARVAAM
Trigger: CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCC...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACATGAGGCTGAGGGTGTaGCGCACTGCTTCAGCACTC +
Preference number: 5 (lower is better)
Translates to: LCTLSAEGMGYFDSHRKHMRLRV*RTASAL
Trigger: GAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCAT...GTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGATGAGGCTGAGGGTGTaGCGCACTGCTTCAGCACTC +
Preference number: 5 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQMRLRV*RTASAL
Trigger: GAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCAT...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCCTGATACAGCTGACTaGGCTGGCAGGCCCACGTGG +
Preference number: 5 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYPDTAD*AGRPTW
Trigger: CCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAGG...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTCCTGATACAGCTGACTaGGCTGGCAGGCCCACGTGG +
Preference number: 5 (lower is better)
Translates to: WGILTPIESTSLSHQMTAPDTAD*AGRPTW
Trigger: CCACGTGGGCCTGCCAGCCAAGTCAGCTGTATCAGG...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATGGCTGTTCCCCAGCTaGTCCAATGGGGGTGACAGG +
Preference number: 5 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIWLFPS*SNGGDR
Trigger: CCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCA...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTTGGCTGTTCCCCAGCTaGTCCAATGGGGGTGACAGG +
Preference number: 5 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPWLFPS*SNGGDR
Trigger: CCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCA...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCAGCAGCAAATAACAGGTaGACCACAGTCTTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: DHLQMVELHSIIQGNVAPAANNR*TTVLFR
Trigger: TCGGAACAAGACTGTGGTCAACCTGTTATTTGCTGC...TGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp GCAAGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACTCATCCAGGGGAATGTaGCCCCACCTGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: ASLDQEFNNFDVSFSCSNSSRGM*PHLSLA
Trigger: TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGA...GTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACTCATCCAGGGGAATGTaGCCCCACCTGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LLREWGILTPIESTSLSHSSRGM*PHLSLA
Trigger: TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGA...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGTTCCCAGCCATTTTGTaGAGATACTGCAACACCTGG +
Preference number: 5 (lower is better)
Translates to: EGELVVAQATWLFAHKLVFPAIL*RYCNTW
Trigger: CCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAA...CACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CAA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTACCACTACTGGACTCTaGGACCACGCGGTGCATCTC +
Preference number: 5 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPTTTGL*DHAVHL
Trigger: GAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGT...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CAA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATAACCACTACTGGACTCTaGGACCACGCGGTGCATCTC +
Preference number: 5 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCITTTGL*DHAVHL
Trigger: GAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGT...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CAA 90 bp CTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACGTCAGGAGCACAATGTaGCTGCTCACACACTTTCGG +
Preference number: 5 (lower is better)
Translates to: LHQSISLMMVSSGRGRGDVRSTM*LLTHFR
Trigger: CCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGAC...GTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp AATGTTGCTGCTCACACACTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTCCTCCAGTGAGCTCTTaGACATCCTCAAAGATGCGA +
Preference number: 5 (lower is better)
Translates to: NVAAHTLSEEISVQEATTPPVSS*TSSKMR
Trigger: TCGCATCTTTGAGGATGTCAAAGAGCTCACTGGAGG...AGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAGTGTGTGAGCAGCAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS-3UTR CAA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTCCCACAGGTCTGGGTTaGACTTGGCCAGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: WGILTPIESTSLSHQMTAPTGLG*TWPAEG
Trigger: TCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGG...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GCACTTCTTTTCCTTGAGATAATAGCCGATGGCATAATTCCGATCCCCTGTTTCCCCACAGGTCTGGGTTaGACTTGGCCAGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: ALLFLEIIADGIIPIPCFPTGLG*TWPAEG
Trigger: TCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGG...GAAACAGGGGATCGGAATTATGCCATCGGCTATTATCTCAAGGAAAAGAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CAA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATGCCCACAGAGTGCCGTaGACCATCCACAGTGCACAG +
Preference number: 5 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYAHRVP*TIHSAQ
Trigger: CTGTGCACTGTGGATGGTCAACGGCACTCTGTGGGC...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCAGGCCACTTGGCTCTTaGCCCACAAACTTGTGCACG +
Preference number: 5 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFRPLGS*PTNLCT
Trigger: CGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCT...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCAGGCCACTTGGCTCTTaGCCCACAAACTTGTGCACG +
Preference number: 5 (lower is better)
Translates to: VLCLLREWGILTPIESTSRPLGS*PTNLCT
Trigger: CGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCT...GCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTGTAGCGCAGGCCACTaGGCTCTTTGCCCACAAACT +
Preference number: 5 (lower is better)
Translates to: SVDMYMCMVARVPPPEYLCSAGH*ALCPQT
Trigger: AGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACA...GAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGTTGTTACAGTCCATCTaGATCAGGGAGCTGACAACA +
Preference number: 5 (lower is better)
Translates to: EGELVVAQATWLFAHKLVLLQSI*IRELTT
Trigger: TGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAA...CACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CAA 90 bp GGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGCAGACTGGAATGTGGCATaGCTGAAACCCATGTATTCA +
Preference number: 5 (lower is better)
Translates to: GRACCSAGHLALCPQTCADWNVA*LKPMYS
Trigger: TGAATACATGGGTTTCAGCAATGCCACATTCCAGTC...TGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR CAA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTGGGCAGATCCCACCGTaGGCGAGGGTGGCTGCCATG +
Preference number: 5 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIGQIPP*ARVAAM
Trigger: CATGGCAGCCACCCTCGCCAACGGTGGGATCTGCCC...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATAATGAGGCTGAGGGTGTaGCGCACTGCTTCAGCACTC +
Preference number: 5 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIMRLRV*RTASAL
Trigger: GAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCAT...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AATGGGGGTGACAGGCACATCATTCCCATGACATTGGGTACCACCAGGAGGATGGCAGCAAATAACAGGTaGACCACAGTCTTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: NGGDRHIIPMTLGTTRRMAANNR*TTVLFR
Trigger: TCGGAACAAGACTGTGGTCAACCTGTTATTTGCTGC...CATCCTCCTGGTGGTACCCAATGTCATGGGAATGATGTGCCTGTCACCCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp CCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTGGGTTGCCCCACCTGTCCTaGGCAAAAGGATTCACTTTG +
Preference number: 5 (lower is better)
Translates to: PEYLSHDGFFRERKRRPGLPHLS*AKGFTL
Trigger: CAAAGTGAATCCTTTTGCCAAGGACAGGTGGGGCAA...CCCAGGTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTTTGCCCCACCTGTCCTaGGCAAAAGGATTCACTTTG +
Preference number: 5 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSLPHLS*AKGFTL
Trigger: CAAAGTGAATCCTTTTGCCAAGGACAGGTGGGGCAA...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCATCATCCAGGGGAATGTaGCCCCACCTGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPSSRGM*PHLSLA
Trigger: TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGA...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGACCACCTCCAGATGGTaGAACTGCACAGCATCATCC +
Preference number: 5 (lower is better)
Translates to: TPIESTSLSHQMTAWSPLTTSRW*NCTASS
Trigger: GGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGT...CAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACACCACCTCCAGATGGTaGAACTGCACAGCATCATCC +
Preference number: 5 (lower is better)
Translates to: LHQSISLMMVSSGRGRGDTTSRW*NCTASS
Trigger: GGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGT...GTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGATCACCAAATGACTGCTaGGTCCCCACTGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LSIKLAVSSSSSMSWPRGSPNDC*VPTEAV
Trigger: CACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGA...TCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS GCA 90 bp TCCTTAACCCTTCAGTACCTTCAGCTGCAGCAACATGCAGAGCTGTaGGCGAGTCATAGTCTTTCTGTTCCATATCCATGGCTGACAAGG +
Preference number: 5 (lower is better)
Translates to: SLTLQYLQLQQHAEL*ASHSLSVPYPWLTR
Trigger: CCTTGTCAGCCATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTGAAGGTACTGAAGGGTTAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390288.6
CDS-3UTR CAA 90 bp GGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGACCACTACTGGACTCTaGGACCACGCGGTGCATCTC +
Preference number: 5 (lower is better)
Translates to: GILTPIESTSLSHQMTAWTTTGL*DHAVHL
Trigger: GAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGT...CCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CAA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAGTCAGGAGCACAATGTaGCTGCTCACACACTTTCGG +
Preference number: 5 (lower is better)
Translates to: LCLLREWGILTPIESTSLVRSTM*LLTHFR
Trigger: CCGAAAGTGTGTGAGCAGCAACATTGTGCTCCTGAC...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp GAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTCCTCCAGTGAGCTCTTaGACATCCTCAAAGATGCGA +
Preference number: 5 (lower is better)
Translates to: EVEIKGSHHVHPLRKALLPPVSS*TSSKMR
Trigger: TCGCATCTTTGAGGATGTCAAAGAGCTCACTGGAGG...AAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000486433.5
ENST00000486896.5
CDS-3UTR CAA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACCTCCAGTGAGCTCTTaGACATCCTCAAAGATGCGA +
Preference number: 5 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRPPVSS*TSSKMR
Trigger: TCGCATCTTTGAGGATGTCAAAGAGCTCACTGGAGG...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCCCCACAGGTCTGGGTTaGACTTGGCCAGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCPTGLG*TWPAEG
Trigger: TCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGG...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAAGGCCACTTGGCTCTTaGCCCACAAACTTGTGCACG +
Preference number: 5 (lower is better)
Translates to: LREWGILTPIESTSLSHQRPLGS*PTNLCT
Trigger: CGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCT...TTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATGTAGCGCAGGCCACTaGGCTCTTTGCCCACAAACT +
Preference number: 5 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCICSAGH*ALCPQT
Trigger: AGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACA...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTGGCTGTTCCCCAGCTaGTCCAATGGGGGTGACAGG +
Preference number: 5 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTWLFPS*SNGGDR
Trigger: CCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCA...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTTGGCTGTTCCCCAGCTaGTCCAATGGGGGTGACAGG +
Preference number: 5 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVAWLFPS*SNGGDR
Trigger: CCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCA...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGACGGAGTCCTGGTAATCTaGAAGCAGTTTGACCACCTC +
Preference number: 5 (lower is better)
Translates to: LHQSISLMMVSSGRGRGDGVLVI*KQFDHL
Trigger: GAGGTGGTCAAACTGCTTCAAGATTACCAGGACTCC...GTCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCACCAAATGACTGCTaGGTCCCCACTGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: SVDMYMCMVARVPPPEYLSPNDC*VPTEAV
Trigger: CACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGA...GAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GACCACCTCCAGATGGTTGAACTGCACAGCATCATCCAGGGGAATGTTGCCCCATCATTCCCAGCCATTTaGTTGAGATACTGCAACACT +
Preference number: 5 (lower is better)
Translates to: DHLQMVELHSIIQGNVAPSFPAI*LRYCNT
Trigger: AGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA...TGGGGCAACATTCCCCTGGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479952.5
CDS-3UTR CAA 90 bp TTGCTGAAACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACACCCACAGGTCTGGGTTaGACTTGGCCAGCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: LLKPMYSFPAILLRYCNTPTGLG*TWPAEG
Trigger: TCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGG...TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTTCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR CAA 90 bp GAGGGAGAGCTTGTTGTAGCGCAGGCCACTTGGCTCTTTGCCCACAAACTTGTGTCAAACTTCTCTGCTTaGTTACAGTCCATCTTGATC +
Preference number: 5 (lower is better)
Translates to: EGELVVAQATWLFAHKLVSNFSA*LQSILI
Trigger: GATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGA...CACAAGTTTGTGGGCAAAGAGCCAAGTGGCCTGCGCTACAACAAGCTCTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486896.5
ENST00000494474.5
CDS-3UTR CAA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGTGGCTGTTCCCCAGCTaGTCCAATGGGGGTGACAGG +
Preference number: 5 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMWLFPS*SNGGDR
Trigger: CCTGTCACCCCCATTGGACAAGCTGGGGAACAGCCA...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGAGCAGCAAATAACAGGTaGACCACAGTCTTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRAANNR*TTVLFR
Trigger: TCGGAACAAGACTGTGGTCAACCTGTTATTTGCTGC...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTGCAAAAGGATTCACTTaGCAAGCCTCGATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSAKGFT*QASIRN
Trigger: ATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTGC...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCTTGCCCCACCTGTCCTaGGCAAAAGGATTCACTTTG +
Preference number: 5 (lower is better)
Translates to: VLCLLREWGILTPIESTSLPHLS*AKGFTL
Trigger: CAAAGTGAATCCTTTTGCCAAGGACAGGTGGGGCAA...GCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCATCCAGGGGAATGTaGCCCCACCTGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTSSRGM*PHLSLA
Trigger: TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGA...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATACCACCTCCAGATGGTaGAACTGCACAGCATCATCC +
Preference number: 5 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDTTSRW*NCTASS
Trigger: GGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGT...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCGGAGTCCTGGTAATCTaGAAGCAGTTTGACCACCTC +
Preference number: 5 (lower is better)
Translates to: VLCLLREWGILTPIESTSGVLVI*KQFDHL
Trigger: GAGGTGGTCAAACTGCTTCAAGATTACCAGGACTCC...GCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCATCACCAAATGACTGCTaGGTCCCCACTGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: FPYSVDMYMCMVARVPPPSPNDC*VPTEAV
Trigger: CACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGA...TGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS TCA 90 bp TGTCCTAGGAATATGGGCAGAAGGAAAATGAGAAGGCGCAGGTCTTaGACCCTTTGGTGCAGACACTTAGCCACTGAAGTCTTTACCAAG +
Preference number: 5 (lower is better)
Translates to: CPRNMGRRKMRRRRS*TLWCRHLATEVFTK
Trigger: CTTGGTAAAGACTTCAGTGGCTAAGTGTCTGCACCAAAGGGTTCAAGACCTGCGCCTTCTCATTTTCCTTCTGCCCATATTCCTAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000390288.6
CDS-3UTR CAA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGACCACTACTGGACTCTaGGACCACGCGGTGCATCTC +
Preference number: 5 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMTTTGL*DHAVHL
Trigger: GAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGT...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CAA 90 bp TTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCTCAAACTTCTCTGCTTaGTTACAGTCCATCTTGATC +
Preference number: 5 (lower is better)
Translates to: LAVSSSSSMSWPRGVDFSSNFSA*LQSILI
Trigger: GATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGA...GGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GATGGTTTTGAGTGGGGCAAGCCATTAGGCTGTACCTTGAAGCCCAGTCTCTCTTCATTCCCAGCCATTTaGTTGAGATACTGCAACACA +
Preference number: 5 (lower is better)
Translates to: DGFEWGKPLGCTLKPSLSSFPAI*LRYCNT
Trigger: TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA...AGAGAGACTGGGCTTCAAGGTACAGCCTAATGGCTTGCCCCACTCAAAACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGATGAGGCTGAGGGTGTaGCGCACTGCTTCAGCACTC +
Preference number: 5 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMMRLRV*RTASAL
Trigger: GAGTGCTGAAGCAGTGCGCAACACCCTCAGCCTCAT...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCGCAGCAAATAACAGGTaGACCACAGTCTTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFAANNR*TTVLFR
Trigger: TCGGAACAAGACTGTGGTCAACCTGTTATTTGCTGC...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAGCAGCAAATAACAGGTaGACCACAGTCTTGTTCCGA +
Preference number: 5 (lower is better)
Translates to: LCLLREWGILTPIESTSLAANNR*TTVLFR
Trigger: TCGGAACAAGACTGTGGTCAACCTGTTATTTGCTGC...TAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAGCAAAAGGATTCACTTaGCAAGCCTCGATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LESLHQSISLMMVSSGRGAKGFT*QASIRN
Trigger: ATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTGC...TCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTTTGCCCCACCTGTCCTaGGCAAAAGGATTCACTTTG +
Preference number: 5 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPLPHLS*AKGFTL
Trigger: CAAAGTGAATCCTTTTGCCAAGGACAGGTGGGGCAA...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTACCACCTCCAGATGGTaGAACTGCACAGCATCATCC +
Preference number: 5 (lower is better)
Translates to: WGILTPIESTSLSHQMTATTSRW*NCTASS
Trigger: GGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGT...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGACCACCTCCAGATGGTaGAACTGCACAGCATCATCC +
Preference number: 5 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWTTSRW*NCTASS
Trigger: GGATGATGCTGTGCAGTTCAACCATCTGGAGGTGGT...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAGGAGTCCTGGTAATCTaGAAGCAGTTTGACCACCTC +
Preference number: 5 (lower is better)
Translates to: LSLSIKLAVSSSSSMSWPGVLVI*KQFDHL
Trigger: GAGGTGGTCAAACTGCTTCAAGATTACCAGGACTCC...TGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCAGGAGTCCTGGTAATCTaGAAGCAGTTTGACCACCTC +
Preference number: 5 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPGVLVI*KQFDHL
Trigger: GAGGTGGTCAAACTGCTTCAAGATTACCAGGACTCC...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGAGTCCTGGTAATCTaGAAGCAGTTTGACCACCTC +
Preference number: 5 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDGVLVI*KQFDHL
Trigger: GAGGTGGTCAAACTGCTTCAAGATTACCAGGACTCC...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGTCACCAAATGACTGCTaGGTCCCCACTGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWSPNDC*VPTEAV
Trigger: CACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGA...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: VARVPPPEYLSHDGFFREREWGI*TPIEST
Trigger: AGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCT...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATAGTGCAGTGGTGAACTaGTGGATAGGGATTCGTTCC +
Preference number: 5 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYSAVVN*WIGIRS
Trigger: GGAACGAATCCCTATCCACAAGTTCACCACTGCACT...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CAA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTATCAAACTTCTCTGCTTaGTTACAGTCCATCTTGATC +
Preference number: 5 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLSNFSA*LQSILI
Trigger: GATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGA...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GTGCTCATACCATGCTTTCTAAGTTCTCTTTGGACAGGGCCTCAGCTGCTGCCTTTCCCAGCCATTTTGTaGAGATACTGCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: VLIPCFLSSLWTGPQLLPFPAIL*RYCNTK
Trigger: TTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAA...AGGCAGCAGCTGAGGCCCTGTCCAAAGAGAACTTAGAAAGCATGGTATGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp ACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGTCATTCCCAGCCATTTaGTTGAGATACTGCAACACA +
Preference number: 5 (lower is better)
Translates to: TPIESTSLSHQMTAWSPLSFPAI*LRYCNT
Trigger: TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA...CAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCGACTGGAATGTGGCATaGCTGAAACCCATGTATTCA +
Preference number: 5 (lower is better)
Translates to: SVDMYMCMVARVPPPEYLDWNVA*LKPMYS
Trigger: TGAATACATGGGTTTCAGCAATGCCACATTCCAGTC...GAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGCAAAAGGATTCACTTaGCAAGCCTCGATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVAKGFT*QASIRN
Trigger: ATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTGC...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTTCATCCAGGGGAATGTaGCCCCACCTGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHISSRGM*PHLSLA
Trigger: TGCCAAGGACAGGTGGGGCAACATTCCCCTGGATGA...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGGGAGTCCTGGTAATCTaGAAGCAGTTTGACCACCTC +
Preference number: 5 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWGVLVI*KQFDHL
Trigger: GAGGTGGTCAAACTGCTTCAAGATTACCAGGACTCC...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCACCAAATGACTGCTaGGTCCCCACTGAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: KGSRFLQTTKAMYIAIPTSPNDC*VPTEAV
Trigger: CACTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGA...AGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQREWGI*TPIEST
Trigger: AGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCT...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGATCTCTGTCTATAAAATaGGCTGTTAGCAGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: LESLHQSISLMMVSSGRGSLSIK*AVSSSS
Trigger: GCTGCTACTGCTAACAGCCAATTTTATAGACAGAGA...TCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACCATGTCATTCCCAGCCATTTaGTTGAGATACTGCAACACC +
Preference number: 5 (lower is better)
Translates to: LQSILIRELTTMAPALTMSFPAI*LRYCNT
Trigger: GGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA...CATGGTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS GCA 90 bp ATATTAGAGAGATGGGAATGTGATCCTTCCAGAAATATCACTCACTaGCTACCTGTGGTAAGTGCCCATTTGAGGCAGGGTACCTACTTC +
Preference number: 5 (lower is better)
Translates to: ILERWECDPSRNITH*LPVVSAHLRQGTYF
Trigger: GAAGTAGGTACCCTGCCTCAAATGGGCACTTACCACAGGTAGGCAGTGAGTGATATTTCTGGAAGGATCACATTCCCATCTCTCTAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390288.6
CDS-3UTR CAA 90 bp AGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTAGGCCACTTGGCTCTTaGCCCACAAACTTGTGCACG +
Preference number: 5 (lower is better)
Translates to: RFLQTTKAMYIAIPTSHIRPLGS*PTNLCT
Trigger: CGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCT...AATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCTAGGCCACTTGGCTCTTaGCCCACAAACTTGTGCACG +
Preference number: 5 (lower is better)
Translates to: SFPAILLRYCNTKSNFSARPLGS*PTNLCT
Trigger: CGTGCACAAGTTTGTGGGCAAAGAGCCAAGTGGCCT...AGCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR CAA 90 bp GAAGTAGAGATCAAGGGCAGCCATCATGTCCACCCCCTTAGGAAAGCACTTCTTTCAAACTTCTCTGCTTaGTTACAGTCCATCTTGATC +
Preference number: 5 (lower is better)
Translates to: EVEIKGSHHVHPLRKALLSNFSA*LQSILI
Trigger: GATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGA...AAGAAGTGCTTTCCTAAGGGGGTGGACATGATGGCTGCCCTTGATCTCTACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000486896.5
CDS-3UTR CAA 90 bp CCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGAGGAAGAGGAGATCAAACTTCTCTGCTTaGTTACAGTCCATCTTGATC +
Preference number: 5 (lower is better)
Translates to: PPPEYLSHDGFFRERKRRSNFSA*LQSILI
Trigger: GATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGA...TCTCCTCTTCCTCTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCTTCAGGGAGTTCCCAGCCATTTTGTaGAGATACTGCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: VARVPPPEYLSHDGFFREFPAIL*RYCNTK
Trigger: TTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAA...CTCCCTGAAGAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATAGACTGGAATGTGGCATaGCTGAAACCCATGTATTCA +
Preference number: 5 (lower is better)
Translates to: SMSWPRGVDFSRLLKPCIDWNVA*LKPMYS
Trigger: TGAATACATGGGTTTCAGCAATGCCACATTCCAGTC...TATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTGCAAAAGGATTCACTTaGCAAGCCTCGATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPAKGFT*QASIRN
Trigger: ATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTGC...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGCAAAAGGATTCACTTaGCAAGCCTCGATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDAKGFT*QASIRN
Trigger: ATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTGC...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTAGATTTCTCCAGACTACTACTCTCCATAGTATTTTaGGTGGTTATGGATTACATG +
Preference number: 5 (lower is better)
Translates to: SSSSSMSWPRGVDFSRLLLSIVF*VVMDYM
Trigger: CATGTAATCCATAACCACCAAAAATACTATGGAGAG...TAGTAGTCTGGAGAAATCTACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TTGACCACAGTCTTGTTCCGAATTTCTGCCCCTTCACGCCGTGGGTCTAACTTCCTCTCCATAGTATTTTaGGTGGTTATGGATTACATG +
Preference number: 5 (lower is better)
Translates to: LTTVLFRISAPSRRGSNFLSIVF*VVMDYM
Trigger: CATGTAATCCATAACCACCAAAAATACTATGGAGAG...GAAGTTAGACCCACGGCGTGAAGGGGCAGAAATTCGGAACAAGACTGTGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp CAAGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACAAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: QASIRNLTTSMCPSAAATREWGI*TPIEST
Trigger: AGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCT...TGTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPREWGI*TPIEST
Trigger: AGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCT...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACTCTCTGTCTATAAAATaGGCTGTTAGCAGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: LLREWGILTPIESTSLSHSLSIK*AVSSSS
Trigger: GCTGCTACTGCTAACAGCCAATTTTATAGACAGAGA...GTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTTCTCTGTCTATAAAATaGGCTGTTAGCAGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSSLSIK*AVSSSS
Trigger: GCTGCTACTGCTAACAGCCAATTTTATAGACAGAGA...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATTTCCCAGCCATTTTGTaGAGATACTGCAACACTTTC +
Preference number: 5 (lower is better)
Translates to: CSNMQSCARVIVFLFHIHFPAIL*RYCNTF
Trigger: GAAAGTGTTGCAGTATCTCAACAAAATGGCTGGGAA...ATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479952.5
CDS-3UTR CAA 90 bp AGTCTTTCTGTTCCATATCCATGGCTGACAAGGCAAACCTTCGAAGAGCTGAGAAGGAAAGCAGTGGCATaGCTGAAACCCATGTATTCA +
Preference number: 5 (lower is better)
Translates to: SLSVPYPWLTRQTFEELRRKAVA*LKPMYS
Trigger: TGAATACATGGGTTTCAGCAATGCCACTGCTTTCCT...TCTCAGCTCTTCGAAGGTTTGCCTTGTCAGCCATGGATATGGAACAGAAAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479952.5
ENST00000539272.5
CDS-3UTR CAA 90 bp TTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATGGCACCAGCATTGACTTAATACCTCACAGGTaGACTAGCCCTTCTGAACTC +
Preference number: 5 (lower is better)
Translates to: FVTVHLDQGADNNGTSIDLIPHR*TSPSEL
Trigger: GAGTTCAGAAGGGCTAGTCAACCTGTGAGGTATTAA...GTCAATGCTGGTGCCATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CAA 90 bp CATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGAGTGCAGTGGTGAACTaGTGGATAGGGATTCGTTCC +
Preference number: 5 (lower is better)
Translates to: HVYSHSHFPYSVDMYMCMSAVVN*WIGIRS
Trigger: GGAACGAATCCCTATCCACAAGTTCACCACTGCACT...CATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000623608.3
CDS-3UTR CAA 90 bp TGGGGTATTTTGACTCCCATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTTGTTACAGTCCATCTaGATCAGGGAGCTGACAACA +
Preference number: 5 (lower is better)
Translates to: WGILTPIESTSLSHQMTALLQSI*IRELTT
Trigger: TGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAA...AGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTATGGGAGTCAAAATACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCTTGTTACAGTCCATCTaGATCAGGGAGCTGACAACA +
Preference number: 5 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSLLQSI*IRELTT
Trigger: TGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAA...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTTCAAACTTCTCTGCTTaGTTACAGTCCATCTTGATC +
Preference number: 5 (lower is better)
Translates to: VDMYMCMVARVPPPEYLSSNFSA*LQSILI
Trigger: GATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGA...AGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTATTCCCAGCCATTTTGTaGAGATACTGCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVFPAIL*RYCNTK
Trigger: TTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAA...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TGCAGCAACATGCAGAGCTGTGCGCGAGTCATAGTCTTTCTGTTCCATATCCATTTCCCAGCCATTTTGTaGAGATACTGCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: CSNMQSCARVIVFLFHIHFPAIL*RYCNTK
Trigger: TTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAA...ATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp TCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTTCATTCCCAGCCATTTaGTTGAGATACTGCAACACA +
Preference number: 5 (lower is better)
Translates to: SHFPYSVDMYMCMVARVPSFPAI*LRYCNT
Trigger: TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA...AGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCATCATTCCCAGCCATTTaGTTGAGATACTGCAACACA +
Preference number: 5 (lower is better)
Translates to: HFPYSVDMYMCMVARVPPSFPAI*LRYCNT
Trigger: TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA...TGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGGACTGGAATGTGGCATaGCTGAAACCCATGTATTCA +
Preference number: 5 (lower is better)
Translates to: LQTTKAMYIAIPTSHILWDWNVA*LKPMYS
Trigger: TGAATACATGGGTTTCAGCAATGCCACATTCCAGTC...CCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATTGCCCCACCTGTCCTaGGCAAAAGGATTCACTTTG +
Preference number: 5 (lower is better)
Translates to: QTTKAMYIAIPTSHILWILPHLS*AKGFTL
Trigger: CAAAGTGAATCCTTTTGCCAAGGACAGGTGGGGCAA...TATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AGCCTCGATCAGGAATTTAACAACTTCGATGTGTCCTTCAGCTGCAGCAACATGTCTCTGTCTATAAAATaGGCTGTTAGCAGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: SLDQEFNNFDVSFSCSNMSLSIK*AVSSSS
Trigger: GCTGCTACTGCTAACAGCCAATTTTATAGACAGAGA...CATGTTGCTGCAGCTGAAGGACACATCGAAGTTGTTAAATTCCTGATCGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
CDS-3UTR CAA 90 bp AAACCCATGTATTCATTCCCAGCCATTTTGTTGAGATACTGCAACACCTGGAAGTTGTTACAGTCCATCTaGATCAGGGAGCTGACAACA +
Preference number: 5 (lower is better)
Translates to: KPMYSFPAILLRYCNTWKLLQSI*IRELTT
Trigger: TGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAA...CTTCCAGGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CAA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATTCAAACTTCTCTGCTTaGTTACAGTCCATCTTGATC +
Preference number: 5 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDSNFSA*LQSILI
Trigger: GATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGA...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATTTCCCAGCCATTTTGTaGAGATACTGCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: MYMCMVARVPPPEYLSHDFPAIL*RYCNTK
Trigger: TTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAA...ATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTGACTGGAATGTGGCATaGCTGAAACCCATGTATTCA +
Preference number: 5 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVADWNVA*LKPMYS
Trigger: TGAATACATGGGTTTCAGCAATGCCACATTCCAGTC...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTGCAAAAGGATTCACTTaGCAAGCCTCGATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVAAKGFT*QASIRN
Trigger: ATTCCTGATCGAGGCTTGCAAAGTGAATCCTTTTGC...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ATAGAAAGCACTAGCCTAAGTCACCAAATGACTGCTTGGTCCCCACTGAAGCAGCTCTCCATAGTATTTTaGGTGGTTATGGATTACATG +
Preference number: 5 (lower is better)
Translates to: IESTSLSHQMTAWSPLKQLSIVF*VVMDYM
Trigger: CATGTAATCCATAACCACCAAAAATACTATGGAGAG...CTGCTTCAGTGGGGACCAAGCAGTCATTTGGTGACTTAGGCTAGTGCTTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCCTGGCCAAGGGGAGTACTCTCCATAGTATTTTaGGTGGTTATGGATTACATG +
Preference number: 5 (lower is better)
Translates to: SIKLAVSSSSSMSWPRGVLSIVF*VVMDYM
Trigger: CATGTAATCCATAACCACCAAAAATACTATGGAGAG...TACTCCCCTTGGCCAGGACATGCTGCTGCTACTGCTAACAGCCAATTTTATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATGATGGTTTCCTCTCCATAGTATTTTaGGTGGTTATGGATTACATG +
Preference number: 5 (lower is better)
Translates to: MCMVARVPPPEYLSHDGFLSIVF*VVMDYM
Trigger: CATGTAATCCATAACCACCAAAAATACTATGGAGAG...GAAACCATCATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp CTCTGTACTCTGTCTGCTGAGGGAATGGGGTATTTTGACTCCCATAGAAAGCACCTCTCCATAGTATTTTaGGTGGTTATGGATTACATG +
Preference number: 5 (lower is better)
Translates to: LCTLSAEGMGYFDSHRKHLSIVF*VVMDYM
Trigger: CATGTAATCCATAACCACCAAAAATACTATGGAGAG...GTGCTTTCTATGGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp AGCCATGTATATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: SHVYSHSHFPYSVDMYMCREWGI*TPIEST
Trigger: AGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCT...GCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATATACATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TATAGCCATTCCCACTTCCCATATTCTGTGGATATGTACATGTGCATGGTAGCTAGGGAATGGGGTATTTaGACTCCCATAGAAAGCACT +
Preference number: 5 (lower is better)
Translates to: YSHSHFPYSVDMYMCMVAREWGI*TPIEST
Trigger: AGTGCTTTCTATGGGAGTCAAAATACCCCATTCCCT...AGCTACCATGCACATGTACATATCCACAGAATATGGGAAGTGGGAATGGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATTCTCTGTCTATAAAATaGGCTGTTAGCAGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYSLSIK*AVSSSS
Trigger: GCTGCTACTGCTAACAGCCAATTTTATAGACAGAGA...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp TATTCTGTGGATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATTCAAACTTCTCTGCTTaGTTACAGTCCATCTTGATC +
Preference number: 5 (lower is better)
Translates to: YSVDMYMCMVARVPPPEYSNFSA*LQSILI
Trigger: GATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGA...ATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATCCACAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GGGAGTAGATTTCTCCAGACTACTAAAGCCATGTATATAGCCATTCCCACTTCCTTCCCAGCCATTTTGTaGAGATACTGCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: GSRFLQTTKAMYIAIPTSFPAIL*RYCNTK
Trigger: TTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAA...GGAAGTGGGAATGGCTATATACATGGCTTTAGTAGTCTGGAGAAATCTACTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp GATATGTACATGTGCATGGTAGCTAGAGTCCCTCCACCAGAGTATCTCTCTCATCTCTCCATAGTATTTTaGGTGGTTATGGATTACATG +
Preference number: 5 (lower is better)
Translates to: DMYMCMVARVPPPEYLSHLSIVF*VVMDYM
Trigger: CATGTAATCCATAACCACCAAAAATACTATGGAGAG...ATGAGAGAGATACTCTGGTGGAGGGACTCTAGCTACCATGCACATGTACATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000479952.5
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS-3UTR CAA 90 bp ATCAAACTTCTCTGCTTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATAGAGAAAAAGGGACATaGAGGCTCCACTTGGTTAAG +
Preference number: 5 (lower is better)
Translates to: IKLLCFVTVHLDQGADNNREKGT*RLHLVK
Trigger: CTTAACCAAGTGGAGCCTCAATGTCCCTTTTTCTCT...ATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486896.5
CDS-3UTR CAA 90 bp TCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCTTTGTTACAGTCCATCTaGATCAGGGAGCTGACAACA +
Preference number: 5 (lower is better)
Translates to: SFPAILLRYCNTKSNFSALLQSI*IRELTT
Trigger: TGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAA...AGCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR CAA 90 bp ATCAAACTTCTCTGCTTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATTCATTCCCAGCCATTTaGTTGAGATACTGCAACACA +
Preference number: 5 (lower is better)
Translates to: IKLLCFVTVHLDQGADNNSFPAI*LRYCNT
Trigger: TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA...ATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR CAA 90 bp ATCAAACTTCTCTGCTTTGTTACAGTCCATCTTGATCAGGGAGCTGACAACAATTTCCCAGCCATTTTGTaGAGATACTGCAACACAAAA +
Preference number: 5 (lower is better)
Translates to: IKLLCFVTVHLDQGADNNFPAIL*RYCNTK
Trigger: TTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAA...ATTGTTGTCAGCTCCCTGATCAAGATGGACTGTAACAAAGCAGAGAAGTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR CAA 90 bp TCATTCCCAGCCATTTTGTTGAGATACTGCAACACAAAATCAAACTTCTCTGCTTCATTCCCAGCCATTTaGTTGAGATACTGCAACACA +
Preference number: 5 (lower is better)
Translates to: SFPAILLRYCNTKSNFSASFPAI*LRYCNT
Trigger: TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA...AGCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000494474.5
CDS-3UTR CAA 90 bp CACAAAATACTTTCTCTGTCTATAAAATTGGCTGTTAGCAGTAGCAGCAGCATGTCATTCCCAGCCATTTaGTTGAGATACTGCAACACA +
Preference number: 5 (lower is better)
Translates to: HKILSLSIKLAVSSSSSMSFPAI*LRYCNT
Trigger: TGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGA...CATGCTGCTGCTACTGCTAACAGCCAATTTTATAGACAGAGAAAGTATTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000486433.5
ENST00000539272.5
ENST00000610413.4
ENST00000623608.3
CDS CCA 72 bp GGCGTCTCTCTGCCCTGCGCCGCGGCCTCACTGAGGTaGTGCCGGACGCCCCCGCCAAGGAGGGGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: GVSLPCAAASLR*CRTPPPRRGLR
Trigger: CCGGAGCCCCCTCCTTGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGCGGCGCAGGGCAGAGAGACGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000461077.1
ENST00000471282.5
ENST00000479952.5
ENST00000483347.1
ENST00000486433.5
ENST00000486896.5
ENST00000494345.5
ENST00000494474.5
ENST00000610413.4
ENST00000623608.3
CDS GCA 72 bp GTCTCTCTGCCCTGCGCCGCGGCCTCACTGAGGTGGTaGCGGACGCCCCCGCCAAGGAGGGGGCTCCGGCTC +
Preference number: 6 (lower is better)
Translates to: VSLPCAAASLRW*RTPPPRRGLRL
Trigger: GAGCCGGAGCCCCCTCCTTGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGCGGCGCAGGGCAGAGAGAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000461077.1
ENST00000471282.5
ENST00000479952.5
ENST00000483347.1
ENST00000486433.5
ENST00000486896.5
ENST00000494345.5
ENST00000494474.5
ENST00000610413.4
ENST00000623608.3
CDS TCA 72 bp TGTGTGGCGTCTCTCTGCCCTGCGCCGCGGCCTCACTaGGGTGGTGCCGGACGCCCCCGCCAAGGAGGGGGC +
Preference number: 6 (lower is better)
Translates to: CVASLCPAPRPH*GGAGRPRQGGG
Trigger: GCCCCCTCCTTGGCGGGGGCGTCCGGCACCACCTCAGTGAGGCCGCGGCGCAGGGCAGAGAGACGCCACACA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000461077.1
ENST00000471282.5
ENST00000479952.5
ENST00000483347.1
ENST00000486433.5
ENST00000486896.5
ENST00000494345.5
ENST00000494474.5
ENST00000610413.4
ENST00000623608.3
CDS CCA 72 bp AAGGTGCGGGGGAGTTCTGTGAGGGAGCGCTGGACCTaGAAGACGGAGAATGTGGGCCCGGTGGGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: KVRGSSVRERWT*KTENVGPVGGA
Trigger: AGCCCCACCCACCGGGCCCACATTCTCCGTCTTCCAGGTCCAGCGCTCCCTCACAGAACTCCCCCGCACCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000471282.5
ENST00000483347.1
ENST00000486433.5
ENST00000494345.5
ENST00000494474.5
ENST00000610413.4
ENST00000623608.3
CDS TCA 72 bp GGCGGAGCGAGCGAGACAAGGTGCGGGGGAGTTCTGTaGGGGAGCGCTGGACCTGGAAGACGGAGAATGTGG +
Preference number: 6 (lower is better)
Translates to: GGASETRCGGVL*GSAGPGRRRMW
Trigger: CCACATTCTCCGTCTTCCAGGTCCAGCGCTCCCTCACAGAACTCCCCCGCACCTTGTCTCGCTCGCTCCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000471282.5
ENST00000483347.1
ENST00000486433.5
ENST00000494345.5
ENST00000494474.5
ENST00000610413.4
ENST00000623608.3
CDS CCA 72 bp CGAGACAAGGTGCGGGGGAGTTCTGTGAGGGAGCGCTaGACCTGGAAGACGGAGAATGTGGGCCCGGTGGGT +
Preference number: 6 (lower is better)
Translates to: RDKVRGSSVRER*TWKTENVGPVG
Trigger: ACCCACCGGGCCCACATTCTCCGTCTTCCAGGTCCAGCGCTCCCTCACAGAACTCCCCCGCACCTTGTCTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000471282.5
ENST00000483347.1
ENST00000486433.5
ENST00000494345.5
ENST00000494474.5
ENST00000610413.4
ENST00000623608.3
CDS CAA 90 bp GTTGACCATCCACAGTGCACAGGGAGACACCCCACAGGTCTGGGTTaGACTTGGCCAGCTGAGGGATGTAGGCTGCCACTTTGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: VDHPQCTGRHPTGLG*TWPAEGCRLPLCLQ
Trigger: CTGGAGGCAAAGTGGCAGCCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGGGTGTCTCCCTGTGCACTGTGGATGGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311966.9
ENST00000486433.5
ENST00000486896.5
ENST00000494345.5
ENST00000539272.5
CDS CAA 90 bp TTTTCGGAAGAGATCTCGGTCCAAGAGGCCACCACTACTGGACTCTaGGACCACGCGGTGCATCTCGCTCATGCAGTCTCGGAGCCGAGG +
Preference number: 6 (lower is better)
Translates to: FSEEISVQEATTTGL*DHAVHLAHAVSEPR
Trigger: CCTCGGCTCCGAGACTGCATGAGCGAGATGCACCGCGTGGTCCAAGAGTCCAGTAGTGGTGGCCTCTTGGACCGAGATCTCTTCCGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461077.1
CDS CAA 90 bp GTTGACCATCCACAGTGCACAGGGAGACACCCCACAGGTCTGGGTTaGACTTGGCCAGCTGAGGGATGTAGGCTGCCACTGATCCTGGTG +
Preference number: 6 (lower is better)
Translates to: VDHPQCTGRHPTGLG*TWPAEGCRLPLILV
Trigger: CACCAGGATCAGTGGCAGCCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGGGTGTCTCCCTGTGCACTGTGGATGGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494474.5
ENST00000610413.4
CDS CAA 90 bp GTTGACCATCCACAGTGCACAGGGAGACACCCCACAGGTCTGGGTTaGACTTGGCCAGCTGAGGGATGTAGGCTGCCACTTTCGGAAGAG +
Preference number: 6 (lower is better)
Translates to: VDHPQCTGRHPTGLG*TWPAEGCRLPLSEE
Trigger: CTCTTCCGAAAGTGGCAGCCTACATCCCTCAGCTGGCCAAGTCAAACCCAGACCTGTGGGGTGTCTCCCTGTGCACTGTGGATGGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424141.6
ENST00000623608.3
CDS GCA 72 bp TCGCTCATGCAGTCTCGGAGCCGAGGATCTGATGTCTaGAGTCCAGTGGCCTTTAGTGCTGATCCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: SLMQSRSRGSDV*SPVAFSADPGA
Trigger: AGCACCAGGATCAGCACTAAAGGCCACTGGACTGCAGACATCAGATCCTCGGCTCCGAGACTGCATGAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483347.1
CDS GCA 72 bp TCGCTCATGCAGTCTCGGAGCCGAGGATCTGATGTCTaGAGTCCAGTGGCCTTTAGTGCAGTGGTGAACTTG +
Preference number: 6 (lower is better)
Translates to: SLMQSRSRGSDV*SPVAFSAVVNL
Trigger: CAAGTTCACCACTGCACTAAAGGCCACTGGACTGCAGACATCAGATCCTCGGCTCCGAGACTGCATGAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000461077.1
ENST00000471282.5
ENST00000479952.5
ENST00000486433.5
ENST00000486896.5
ENST00000491880.1
ENST00000494345.5
ENST00000539272.5
ENST00000623608.3
CDS CCA 72 bp CACAGGACAGTTTTCAGAGAGCAGTGCCCTTGTTTCTaGGGCCCTCACTTTCGGAAGAGATCTCGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: HRTVFREQCPCF*GPHFRKRSRSK
Trigger: CTTGGACCGAGATCTCTTCCGAAAGTGAGGGCCCCAGAAACAAGGGCACTGCTCTCTGAAAACTGTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471282.5
ENST00000491880.1
CDS TCA 72 bp CTTCGATGTGTCCTAGGAATATGGGCAGAAGGAAAATaGGAAGGCGCAGGTCTTGAACCCTTTGGTGCAGAC +
Preference number: 6 (lower is better)
Translates to: LRCVLGIWAEGK*EGAGLEPFGAD
Trigger: GTCTGCACCAAAGGGTTCAAGACCTGCGCCTTCTCATTTTCCTTCTGCCCATATTCCTAGGACACATCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000390288.6
CDS GCA 72 bp CTTCAGTACCTTCAGCTGCAGCAACATGCAGAGCTGTaGGCGAGTCATAGTCTTTCTGTTCCATATCCATGG +
Preference number: 6 (lower is better)
Translates to: LQYLQLQQHAEL*ASHSLSVPYPW
Trigger: CCATGGATATGGAACAGAAAGACTATGACTCGCGCACAGCTCTGCATGTTGCTGCAGCTGAAGGTACTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390288.6
CDS CCA 72 bp TGCAGTCCAGTGGCCTTTAGTGCAGTGGTGAACTTGTaGATAGGGATTCGTTCCTGTCCTTCAGCAATAGTG +
Preference number: 6 (lower is better)
Translates to: CSPVAFSAVVNL*IGIRSCPSAIV
Trigger: CACTATTGCTGAAGGACAGGAACGAATCCCTATCCACAAGTTCACCACTGCACTAAAGGCCACTGGACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000311966.9
ENST00000424141.6
ENST00000461077.1
ENST00000471282.5
ENST00000479952.5
ENST00000486433.5
ENST00000486896.5
ENST00000491880.1
ENST00000494345.5
ENST00000539272.5
ENST00000623608.3
CDS CAA 72 bp AATATCACTCACTGCCTACCTGTGGTAAGTGCCCATTaGAGGCAGGGTACCTACTTCCTAGGACACTGCTCT +
Preference number: 6 (lower is better)
Translates to: NITHCLPVVSAH*RQGTYFLGHCS
Trigger: AGAGCAGTGTCCTAGGAAGTAGGTACCCTGCCTCAAATGGGCACTTACCACAGGTAGGCAGTGAGTGATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390288.6
CDS TCA 72 bp AATATGGGCAGAAGGAAAATGAGAAGGCGCAGGTCTTaGACCCTTTGGTGCAGACACTTAGCCACTGAAGTC +
Preference number: 6 (lower is better)
Translates to: NMGRRKMRRRRS*TLWCRHLATEV
Trigger: GACTTCAGTGGCTAAGTGTCTGCACCAAAGGGTTCAAGACCTGCGCCTTCTCATTTTCCTTCTGCCCATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000390288.6
CDS GCA 72 bp TTCCAGAAATATCACTCACTGCCTACCTGTGGTAAGTaGCCATTTGAGGCAGGGTACCTACTTCCTAGGACA +
Preference number: 6 (lower is better)
Translates to: FQKYHSLPTCGK*PFEAGYLLPRT
Trigger: TGTCCTAGGAAGTAGGTACCCTGCCTCAAATGGGCACTTACCACAGGTAGGCAGTGAGTGATATTTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390288.6
CDS CAA 72 bp AAGGCAAACCTGAGGGTAGTGGGAAAGCAGCTAGAGTaGCCTAGATCAGACTGGAATCACAGGTGTTCTTTG +
Preference number: 6 (lower is better)
Translates to: KANLRVVGKQLE*PRSDWNHRCSL
Trigger: CAAAGAACACCTGTGATTCCAGTCTGATCTAGGCAACTCTAGCTGCTTTCCCACTACCCTCAGGTTTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390288.6
CDS CAA 72 bp GTGAATGAGAGGCAGGAACAAGCTTCCACCTCTATCTaGAGAGAGTCAGTGTTCTCTCTTCTTAGCACTGGG +
Preference number: 6 (lower is better)
Translates to: VNERQEQASTSI*RESVFSLLSTG
Trigger: CCCAGTGCTAAGAAGAGAGAACACTGACTCTCTCAAGATAGAGGTGGAAGCTTGTTCCTGCCTCTCATTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496006.5
CDS CAA 90 bp TGGAAGTTAGTGAATGAGAGGCAGGAACAAGCTTCCACCTCTATCTaGAGAGAGTCAGTGTTCTCTCTTCTTAGCACTGGGCTCATGACA +
Preference number: 6 (lower is better)
Translates to: WKLVNERQEQASTSI*RESVFSLLSTGLMT
Trigger: TGTCATGAGCCCAGTGCTAAGAAGAGAGAACACTGACTCTCTCAAGATAGAGGTGGAAGCTTGTTCCTGCCTCTCATTCACTAACTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496006.5
CDS TCA 72 bp TTGCCTAGATCAGACTGGAATCACAGGTGTTCTTTGTaGACTGGTGTCAGACTGGATGAGTTTCAGAGAAAG +
Preference number: 6 (lower is better)
Translates to: LPRSDWNHRCSL*TGVRLDEFQRK
Trigger: CTTTCTCTGAAACTCATCCAGTCTGACACCAGTTCACAAAGAACACCTGTGATTCCAGTCTGATCTAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390288.6
CDS GCA 72 bp CTGCAAACCGAAGGGTGTCTAGATAAAACTAGTTGCTaGCCCTATAACCTTGAGGGCACATATAATGAAGGT +
Preference number: 6 (lower is better)
Translates to: LQTEGCLDKTSC*PYNLEGTYNEG
Trigger: ACCTTCATTATATGTGCCCTCAAGGTTATAGGGGCAGCAACTAGTTTTATCTAGACACCCTTCGGTTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000390288.6
CDS CAA 72 bp TTGCTGAAACCCATGTATTCATTCCCAGCCATTTTGTaGAGATACTGCAACACTTTCGGAAGAGATCTCGGT +
Preference number: 6 (lower is better)
Translates to: LLKPMYSFPAIL*RYCNTFGRDLG
Trigger: ACCGAGATCTCTTCCGAAAGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTTCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479952.5
CDS CAA 72 bp GCATTGCTGAAACCCATGTATTCATTCCCAGCCATTTaGTTGAGATACTGCAACACTTTCGGAAGAGATCTC +
Preference number: 6 (lower is better)
Translates to: ALLKPMYSFPAI*LRYCNTFGRDL
Trigger: GAGATCTCTTCCGAAAGTGTTGCAGTATCTCAACAAAATGGCTGGGAATGAATACATGGGTTTCAGCAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479952.5
CDS CAA 72 bp TTGAGATACTGCAACACAAAATCAAACTTCTCTGCTTaGTTACAGTCCATTTTCGGAAGAGATCTCGGTCCA +
Preference number: 6 (lower is better)
Translates to: LRYCNTKSNFSA*LQSIFGRDLGP
Trigger: TGGACCGAGATCTCTTCCGAAAATGGACTGTAACAAAGCAGAGAAGTTTGATTTTGTGTTGCAGTATCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461077.1
CDS CCA 72 bp TATCCAGATGAGACTGTTATACTCATATTAGAGAGATaGGAATGTGATCCTTCCAGAAATATCACTCACTGC +
Preference number: 6 (lower is better)
Translates to: YPDETVILILER*ECDPSRNITHC
Trigger: GCAGTGAGTGATATTTCTGGAAGGATCACATTCCCATCTCTCTAATATGAGTATAACAGTCTCATCTGGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390288.6
CDS CAA 72 bp CCTATAACCTTGAGGGCACATATAATGAAGGTACTTTaGGTGAAAAAGAAAGGGTCTTATGATTACCCTCCT +
Preference number: 6 (lower is better)
Translates to: PITLRAHIMKVL*VKKKGSYDYPP
Trigger: AGGAGGGTAATCATAAGACCCTTTCTTTTTCACCAAAAGTACCTTCATTATATGTGCCCTCAAGGTTATAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000390288.6