RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLI2 (Homo sapiens)

Ensembl gene IDs: ENSG00000074047

Ensembl transcript IDs: ENST00000341310.10, ENST00000360874.10, ENST00000361492.9, ENST00000418323.6, ENST00000433812.1, ENST00000437950.5, ENST00000438299.5, ENST00000445186.5, ENST00000452319.6, ENST00000452692.5, ENST00000472722.5, ENST00000482119.6

Found 1634 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTaGCCCGCCTGGCTCCGCCGCCTGGAGCCTCGTGGGGGAAGGCGG +
Preference number: 1 (lower is better)
Translates to: APAAGTGHRAAAQGR*PAWLRRLEPRGGRR
Trigger: CCGCCTTCCCCCACGAGGCTCCAGGCGGCGGAGCCAGGCGGGCCAGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 90 bp GGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTaGACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCG +
Preference number: 1 (lower is better)
Translates to: GGSGPGFTLWVLWKR*TRGRDRASGRRTGS
Trigger: CGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 90 bp TCGGCACAGGGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTaGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGC +
Preference number: 1 (lower is better)
Translates to: SAQGGSGPGFTLWVL*KRCTRGRDRASGRR
Trigger: GCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCCCTGTGCCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 90 bp CGTGCAGGCAGTCCTCCACGGCCTGGCTGGTGCTGCTGGCCTCGGTaGTCTCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCAT +
Preference number: 1 (lower is better)
Translates to: RAGSPPRPGWCCWPR*SLGRQAPCRPHCPH
Trigger: ATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGGAGGACTGCCTGCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATaGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCA +
Preference number: 1 (lower is better)
Translates to: PCWWSCRGAPAAGSA*SPRSRTAPTAAGSA
Trigger: TGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 90 bp GCCGAGCTGACCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTaGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGC +
Preference number: 1 (lower is better)
Translates to: AELTVLVELSRRSCS*LSMVTSLADSSDSR
Trigger: GCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGGTCAGCTCGGC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 90 bp CCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTaGACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCGGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: PVPSSRAPLACALMY*TTSSGSTRSSSGSP
Trigger: GGGGCTGCCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 90 bp CTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGTCCTCCACGGCCTaGCTGGTGCTGCTGGCCTCGGTGCTCTCTGGGCCGCCAGGCTCC +
Preference number: 1 (lower is better)
Translates to: LSVLMALTCRQSSTA*LVLLASVLSGPPGS
Trigger: GGAGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGGAGGACTGCCTGCACGTCAGAGCCATCAAGACCGAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 90 bp CAGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTaGAAGCACCAGGTCGTCCTCCGGCAGCCCCAGGTCGGCCTCGGG +
Preference number: 1 (lower is better)
Translates to: QSATGVRLDVLHHVV*KHQVVLRQPQVGLG
Trigger: CCCGAGGCCGACCTGGGGCTGCCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 90 bp GGCTGCCTGCCACTGGCTGTCGCAGCTGCTGCATGTAGTTTACCCTaGGGATGCCCTGGGAGGGGGCTCCGCTGCGGGGCTGCAGGTGTG +
Preference number: 1 (lower is better)
Translates to: GCLPLAVAAAACSLP*GCPGRGLRCGAAGV
Trigger: CACACCTGCAGCCCCGCAGCGGAGCCCCCTCCCAGGGCATCCCCAGGGTAAACTACATGCAGCAGCTGCGACAGCCAGTGGCAGGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR TCA 90 bp GAGGTCAGCCAGCTGCTCCTGGGAGAGGGGAAGGGCACACCCACATaGGCCGTGTCCAGACACCTGGCCCTGCGTCAGCGCCAGAGGGGA +
Preference number: 1 (lower is better)
Translates to: EVSQLLLGEGKGTPT*AVSRHLALRQRQRG
Trigger: TCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTTCCCCTCTCCCAGGAGCAGCTGGCTGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR GCA 90 bp CACCTGCGTCCTGCGGAGGCGGCTGGGGAGGCACCGACCCCATGTTaGCCATCGCTCCCTTGGGCACAGCCTCTGCTGTTTCCTGACTGG +
Preference number: 1 (lower is better)
Translates to: HLRPAEAAGEAPTPC*PSLPWAQPLLFPDW
Trigger: CCAGTCAGGAAACAGCAGAGGCTGTGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCCTCCCCAGCCGCCTCCGCAGGACGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR TCA 90 bp GCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACTCACTG +
Preference number: 1 (lower is better)
Translates to: AGRRPSGSVLTLLRL*MATGLTVLLTADSL
Trigger: CAGTGAGTCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR TCA 90 bp ACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTaGTGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCG +
Preference number: 1 (lower is better)
Translates to: TPARCPRPERHWRAP*CTAPRRLEAPGRPP
Trigger: CGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 90 bp CGTGCAGCCCCGGGCTGGGTAGTCTGGGGTTGTCAGAGAAGCCAGTaGTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGC +
Preference number: 1 (lower is better)
Translates to: RAAPGWVVWGCQRSQ*FPWDTPARCPRPER
Trigger: GCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 90 bp TGCACTAGGCCAAAGCCTGCTGTAGCCACCCCCATCGGGCCTGTTTaGGGCTCCATGAAGCCAGGCTGGCGGGCAGGCAGAAGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: CTRPKPAVATPIGPV*GSMKPGWRAGRRLG
Trigger: CCCCAGCCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGGGGTGGCTACAGCAGGCTTTGGCCTAGTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 90 bp TTTCCTGACTGGACGGCATGGCAGCCATGGCATGGCCTGTGGCCCTaGCGTAGGCCAGCTGCTGCTGCACAGCACGTACCCCACGGTGGC +
Preference number: 1 (lower is better)
Translates to: FPDWTAWQPWHGLWP*RRPAAAAQHVPHGG
Trigger: GCCACCGTGGGGTACGTGCTGTGCAGCAGCAGCTGGCCTACGCCAGGGCCACAGGCCATGCCATGGCTGCCATGCCGTCCAGTCAGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 90 bp GAGGCGGCTGGGGAGGCACCGACCCCATGTTGCCCATCGCTCCCTTaGGCACAGCCTCTGCTGTTTCCTGACTGGACGGCATGGCAGCCA +
Preference number: 1 (lower is better)
Translates to: EAAGEAPTPCCPSLP*AQPLLFPDWTAWQP
Trigger: TGGCTGCCATGCCGTCCAGTCAGGAAACAGCAGAGGCTGTGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCCTCCCCAGCCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR TCA 90 bp CTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTaGGCAGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGG +
Preference number: 1 (lower is better)
Translates to: LGRQAPCRPHCPHSL*AAVCGGARHCAASW
Trigger: CCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR TCA 90 bp CCCATGTTGCCCATCGCTCCCTTGGGCACAGCCTCTGCTGTTTCCTaGCTGGACGGCATGGCAGCCATGGCATGGCCTGTGGCCCTGGCG +
Preference number: 1 (lower is better)
Translates to: PMLPIAPLGTASAVS*LDGMAAMAWPVALA
Trigger: CGCCAGGGCCACAGGCCATGCCATGGCTGCCATGCCGTCCAGTCAGGAAACAGCAGAGGCTGTGCCCAAGGGAGCGATGGGCAACATGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR GCA 90 bp GTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTaGGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCG +
Preference number: 1 (lower is better)
Translates to: VGYTCPVPSSRAPLA*ALMYCTTSSGSTRS
Trigger: CGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 90 bp CCGGGCTGGGTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTaGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGT +
Preference number: 1 (lower is better)
Translates to: PGWVVWGCQRSQCFP*DTPARCPRPERHWR
Trigger: ACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 90 bp CAGCCACCATCCTGCGCTGGCCGTGCAGCCCCGGGCTGGGTAGTCTaGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCC +
Preference number: 1 (lower is better)
Translates to: QPPSCAGRAAPGWVV*GCQRSQCFPWDTPA
Trigger: GGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCGCAGGATGGTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 90 bp TGGAGTCCGCAGCCACCATCCTGCGCTGGCCGTGCAGCCCCGGGCTaGGTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGAT +
Preference number: 1 (lower is better)
Translates to: WSPQPPSCAGRAAPG*VVWGCQRSQCFPWD
Trigger: ATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCGCAGGATGGTGGCTGCGGACTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 90 bp CCACCGCCAGGTTGCCCTGAGGAAAGGGTGGAGGCTTCACCTGGCTaGCCAGGGCGTCTACGGTGCCGGAGCTCACCTCATTCCACTGCA +
Preference number: 1 (lower is better)
Translates to: PPPGCPEERVEASPG*PGRLRCRSSPHSTA
Trigger: TGCAGTGGAATGAGGTGAGCTCCGGCACCGTAGACGCCCTGGCCAGCCAGGTGAAGCCTCCACCCTTTCCTCAGGGCAACCTGGCGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 90 bp GGGCAGGCAGAAGGCTGGGGACCTGGTGGTAGCCCTCCTGGCTCATaGAGGCTGCCAGGTGATGGCTCTGCTGTGGGTAGCTCTGGACTG +
Preference number: 1 (lower is better)
Translates to: GQAEGWGPGGSPPGS*RLPGDGSAVGSSGL
Trigger: CAGTCCAGAGCTACCCACAGCAGAGCCATCACCTGGCAGCCTCCATGAGCCAGGAGGGCTACCACCAGGTCCCCAGCCTTCTGCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 90 bp CTGCTGTTTCCTGACTGGACGGCATGGCAGCCATGGCATGGCCTGTaGCCCTGGCGTAGGCCAGCTGCTGCTGCACAGCACGTACCCCAC +
Preference number: 1 (lower is better)
Translates to: LLFPDWTAWQPWHGL*PWRRPAAAAQHVPH
Trigger: GTGGGGTACGTGCTGTGCAGCAGCAGCTGGCCTACGCCAGGGCCACAGGCCATGCCATGGCTGCCATGCCGTCCAGTCAGGAAACAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 90 bp TGGGCACAGCCTCTGCTGTTTCCTGACTGGACGGCATGGCAGCCATaGCATGGCCTGTGGCCCTGGCGTAGGCCAGCTGCTGCTGCACAG +
Preference number: 1 (lower is better)
Translates to: WAQPLLFPDWTAWQP*HGLWPWRRPAAAAQ
Trigger: CTGTGCAGCAGCAGCTGGCCTACGCCAGGGCCACAGGCCATGCCATGGCTGCCATGCCGTCCAGTCAGGAAACAGCAGAGGCTGTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 90 bp TCGCTCCCTTGGGCACAGCCTCTGCTGTTTCCTGACTGGACGGCATaGCAGCCATGGCATGGCCTGTGGCCCTGGCGTAGGCCAGCTGCT +
Preference number: 1 (lower is better)
Translates to: SLPWAQPLLFPDWTA*QPWHGLWPWRRPAA
Trigger: AGCAGCTGGCCTACGCCAGGGCCACAGGCCATGCCATGGCTGCCATGCCGTCCAGTCAGGAAACAGCAGAGGCTGTGCCCAAGGGAGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 90 bp TCCGGAGGATACCAGGCATGCACACTGTGGCTTGGTGGAGAACACTaGGCTGCTGGTGAGTGCTGGGGGACCGGGCTGCCGTCAGGCCCT +
Preference number: 1 (lower is better)
Translates to: SGGYQACTLWLGGEH*AAGECWGTGLPSGP
Trigger: AGGGCCTGACGGCAGCCCGGTCCCCCAGCACTCACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR TCA 90 bp CCAGGCATGCACACTGTGGCTTGGTGGAGAACACTGGGCTGCTGGTaGGTGCTGGGGGACCGGGCTGCCGTCAGGCCCTGGAGTTTTTGG +
Preference number: 1 (lower is better)
Translates to: PGMHTVAWWRTLGCW*VLGDRAAVRPWSFW
Trigger: CCAAAAACTCCAGGGCCTGACGGCAGCCCGGTCCCCCAGCACTCACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR GCA 90 bp CAGAAGGCTGGGGACCTGGTGGTAGCCCTCCTGGCTCATGGAGGCTaGCAGGTGATGGCTCTGCTGTGGGTAGCTCTGGACTGGGTGAGG +
Preference number: 1 (lower is better)
Translates to: QKAGDLVVALLAHGG*QVMALLWVALDWVR
Trigger: CCTCACCCAGTCCAGAGCTACCCACAGCAGAGCCATCACCTGGCAGCCTCCATGAGCCAGGAGGGCTACCACCAGGTCCCCAGCCTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR GCA 90 bp CTCCATCCTGTTCGTACATGTGGATCTGGCCGTAGTAGTAGAGCATaGTGTGGTCCGGGGCCCCACCTGCGTCCTGCGGAGGCGGCTGGG +
Preference number: 1 (lower is better)
Translates to: LHPVRTCGSGRSSRA*CGPGPHLRPAEAAG
Trigger: CCCAGCCGCCTCCGCAGGACGCAGGTGGGGCCCCGGACCACAGCATGCTCTACTACTACGGCCAGATCCACATGTACGAACAGGATGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR GCA 90 bp GACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTaGACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAG +
Preference number: 1 (lower is better)
Translates to: DSWNPQALGSDDPSG*TQHQALGPLGHHVQ
Trigger: CTGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 90 bp AGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTaGCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATG +
Preference number: 1 (lower is better)
Translates to: SLGLSEKPVLSVGYT*PVPSSRAPLACALM
Trigger: CATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 90 bp AGGCACCGACCCCATGTTGCCCATCGCTCCCTTGGGCACAGCCTCTaGTGTTTCCTGACTGGACGGCATGGCAGCCATGGCATGGCCTGT +
Preference number: 1 (lower is better)
Translates to: RHRPHVAHRSLGHSL*CFLTGRHGSHGMAC
Trigger: ACAGGCCATGCCATGGCTGCCATGCCGTCCAGTCAGGAAACAGCAGAGGCTGTGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR TCA 90 bp CCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTaGGGTCAGCCAGCTGCTCCTGGGAGAGGGGAAGGGCACACCCAC +
Preference number: 1 (lower is better)
Translates to: PPQPPAYSHPCPDLP*GQPAAPGRGEGHTH
Trigger: GTGGGTGTGCCCTTCCCCTCTCCCAGGAGCAGCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR GCA 90 bp TTGGTGGAGAACACTGGGCTGCTGGTGAGTGCTGGGGGACCGGGCTaGCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTT +
Preference number: 1 (lower is better)
Translates to: LVENTGLLVSAGGPG*RQALEFLVVKWVDV
Trigger: AACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCCGGTCCCCCAGCACTCACCAGCAGCCCAGTGTTCTCCACCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 90 bp TGCACACTGTGGCTTGGTGGAGAACACTGGGCTGCTGGTGAGTGCTaGGGGACCGGGCTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAA +
Preference number: 1 (lower is better)
Translates to: CTLWLGGEHWAAGEC*GTGLPSGPGVFGGK
Trigger: TTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCCGGTCCCCCAGCACTCACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR GCA 90 bp TGGCTGGCCAGGGCGTCTACGGTGCCGGAGCTCACCTCATTCCACTaGACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAG +
Preference number: 1 (lower is better)
Translates to: WLARASTVPELTSFH*TGMLFLFRLEGAPK
Trigger: CTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAGCTCCGGCACCGTAGACGCCCTGGCCAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR GCA 90 bp GGCATGGGGGCTCATAGTGGTAGTCATGCCAGGACACTGGCTGCCTaGCACTGGCTGTCGCAGCTGCTGCATGTAGTTTACCCTGGGGAT +
Preference number: 1 (lower is better)
Translates to: GMGAHSGSHARTLAA*HWLSQLLHVVYPGD
Trigger: ATCCCCAGGGTAAACTACATGCAGCAGCTGCGACAGCCAGTGGCAGGCAGCCAGTGTCCTGGCATGACTACCACTATGAGCCCCCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR GCA 90 bp GTGACTCAGCGGGCAGAAGGAAGGGAATCCGGAGGATACCAGGCATaGACACTGTGGCTTGGTGGAGAACACTGGGCTGCTGGTGAGTGC +
Preference number: 1 (lower is better)
Translates to: VTQRAEGRESGGYQA*TLWLGGEHWAAGEC
Trigger: GCACTCACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCCGGATTCCCTTCCTTCTGCCCGCTGAGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 90 bp GGGGGACCGGGCTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTaGGTGGACGTTGCATTGGAGAAACAGGATTGGGTAAACACGCAA +
Preference number: 1 (lower is better)
Translates to: GGPGCRQALEFLVVK*VDVALEKQDWVNTQ
Trigger: TTGCGTGTTTACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCCGGTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR GCA 90 bp CATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGAGCTaGTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGG +
Preference number: 1 (lower is better)
Translates to: HEQESLSDLSFSFLS*SNRCMVVMCLRSWR
Trigger: CCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR TCA 90 bp ATACAGGTTGGGACTGGCAAGGGAAATCCTATCTCAGGAAGGCGATaGACACCACCACAGAGCCACAGACCCTTAGCAATGTTCCCTGGC +
Preference number: 1 (lower is better)
Translates to: IQVGTGKGNPISGRR*TPPQSHRPLAMFPG
Trigger: GCCAGGGAACATTGCTAAGGGTCTGTGGCTCTGTGGTGGTGTTCATCGCCTTCCTGAGATAGGATTTCCCTTGCCAGTCCCAACCTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR TCA 90 bp TGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGATaGCGATGTTGGCCTTGTCCTCAAACTCTCCTAAGAAGTTCCTCA +
Preference number: 1 (lower is better)
Translates to: CLWTEFDVLGRSEPR*RCWPCPQTLLRSSS
Trigger: TGAGGAACTTCTTAGGAGAGTTTGAGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR GCA 90 bp CTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTaGATTGGAGAAACAGGATTGGGTAAACACGCAACTTCCTCTTCC +
Preference number: 1 (lower is better)
Translates to: LPSGPGVFGGKVGGR*IGETGLGKHATSSS
Trigger: GGAAGAGGAAGTTGCGTGTTTACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 90 bp TTCAGGAAGGGCTACATTCTACATGCAAACACTGTAAACACGGTCTaGAGAGGCCAGGGCAGCTTCTGGGCTTGCCCCAAGGAGTACATT +
Preference number: 1 (lower is better)
Translates to: FRKGYILHANTVNTV*RGQGSFWACPKEYI
Trigger: AATGTACTCCTTGGGGCAAGCCCAGAAGCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCCCTTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 90 bp TGGTGCTGTTTGGCAAGGTTGCCACACATTCCCCATGAAAAGGTTTaGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: WCCLARLPHIPHEKV*GVCVCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACACACACACACCCCAAACCTTTTCATGGGGAATGTGTGGCAACCTTGCCAAACAGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR GCA 90 bp TCCTCATTAAGGCCAAGGTCACAGTCAGAGTCACACTCTGAGTGGTaGTGTTTGGCAAGGTTGCCACACATTCCCCATGAAAAGGTTTGG +
Preference number: 1 (lower is better)
Translates to: SSLRPRSQSESHSEW*CLARLPHIPHEKVW
Trigger: CCAAACCTTTTCATGGGGAATGTGTGGCAACCTTGCCAAACAGCACCACTCAGAGTGTGACTCTGACTGTGACCTTGGCCTTAATGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR TCA 90 bp ATGGTGGGGAAGATGCACCAATTCACCCTACAGTGTGTTCAGGAATaGTGTCTCCTGAAGCCAGTTCCAAATTCCATTTCCAGGTGGGTC +
Preference number: 1 (lower is better)
Translates to: MVGKMHQFTLQCVQE*CLLKPVPNSISRWV
Trigger: GACCCACCTGGAAATGGAATTTGGAACTGGCTTCAGGAGACATCATTCCTGAACACACTGTAGGGTGAATTGGTGCATCTTCCCCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATaGTGGGGAAGATGCACCAATTCACCCTACAGTGTGTTCAGGAAT +
Preference number: 1 (lower is better)
Translates to: VCVCVCVCVCVCVCV*WGRCTNSPYSVFRN
Trigger: ATTCCTGAACACACTGTAGGGTGAATTGGTGCATCTTCCCCACCATACACACACACACACACACACACACACACACACACACACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 90 bp AGTTCCTCATTAAGGCCAAGGTCACAGTCAGAGTCACACTCTGAGTaGTGCTGTTTGGCAAGGTTGCCACACATTCCCCATGAAAAGGTT +
Preference number: 1 (lower is better)
Translates to: SSSLRPRSQSESHSE*CCLARLPHIPHEKV
Trigger: AACCTTTTCATGGGGAATGTGTGGCAACCTTGCCAAACAGCACCACTCAGAGTGTGACTCTGACTGTGACCTTGGCCTTAATGAGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR TCA 90 bp AGATGCACCAATTCACCCTACAGTGTGTTCAGGAATGATGTCTCCTaGAGCCAGTTCCAAATTCCATTTCCAGGTGGGTCTTGGTCACAC +
Preference number: 1 (lower is better)
Translates to: RCTNSPYSVFRNDVS*SQFQIPFPGGSWSH
Trigger: GTGTGACCAAGACCCACCTGGAAATGGAATTTGGAACTGGCTTCAGGAGACATCATTCCTGAACACACTGTAGGGTGAATTGGTGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 90 bp TTTTTGGTGGTAAAGTGGGTGGACGTTGCATTGGAGAAACAGGATTaGGTAAACACGCAACTTCCTCTTCCTACTGAGAGATCCCTAGGG +
Preference number: 1 (lower is better)
Translates to: FLVVKWVDVALEKQD*VNTQLPLPTERSLG
Trigger: CCCTAGGGATCTCTCAGTAGGAAGAGGAAGTTGCGTGTTTACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR TCA 90 bp ACCAGAGAGGATGCCCATAAACCTTCTCTTACAACATCTGTCATCTaGAGCGGCCATTGCGCAACAACCCCTCAAGCCTATTTAACACTT +
Preference number: 1 (lower is better)
Translates to: TREDAHKPSLTTSVI*SGHCATTPQAYLTL
Trigger: AAGTGTTAAATAGGCTTGAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTTTATGGGCATCCTCTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 90 bp TATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTaGCAAGGGAAATCCTATCTCAGGAAGGCGATGAACACCACCACA +
Preference number: 1 (lower is better)
Translates to: YIQGCLLYRIYTGWD*QGKSYLRKAMNTTT
Trigger: TGTGGTGGTGTTCATCGCCTTCCTGAGATAGGATTTCCCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 90 bp CTACAGTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTaGGACTGGCAAGGGAAATCCTATCTCAGGAAGGCGATGAACACC +
Preference number: 1 (lower is better)
Translates to: LQYIQGCLLYRIYTG*DWQGKSYLRKAMNT
Trigger: GGTGTTCATCGCCTTCCTGAGATAGGATTTCCCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATACTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR GCA 90 bp TTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATaGTCCCTACCATCTTTCTGCATATCCTTTGAAAGGTTTTGGCCA +
Preference number: 1 (lower is better)
Translates to: FRSRVSSIAFRFKPK*SLPSFCISFERFWP
Trigger: TGGCCAAAACCTTTCAAAGGATATGCAGAAAGATGGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR TCA 90 bp AATGTGCTCCTGAATCATCCAGGTATAATCTGTGCTTTTCCTCTATaGCAAGGTATGTTAGAGACCTCAAGAGTTAGGCTTCATAGAGGA +
Preference number: 1 (lower is better)
Translates to: NVLLNHPGIICAFPL*QGMLETSRVRLHRG
Trigger: TCCTCTATGAAGCCTAACTCTTGAGGTCTCTAACATACCTTGTCATAGAGGAAAAGCACAGATTATACCTGGATGATTCAGGAGCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CCGCGTGGCCGTGGCCATAGGTCGGCCCGTCGCTGCCACGCCGCGGCCCCAGTGCGGCCTGGCTGGTGCTaGTGGCCTCGGTGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: PRGRGHRSARRCHAAAPVRPGWC*WPRCSL
Trigger: CAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCG...CACTGGGGCCGCGGCGTGGCAGCGACGGGCCGACCTATGGCCACGGCCACGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CCGCGTGGCCGTGGCCATAGGTCGGCCCGTCGCTGCCACGCCGCGGCCCCAGTGGCCCGCAGGCTGTACTaGTGCGCCGGCGTGAGGTTG +
Preference number: 2 (lower is better)
Translates to: PRGRGHRSARRCHAAAPVARRLY*CAGVRL
Trigger: CAACCTCACGCCGGCGCAGCAGTACAGCCTGCGGGC...CACTGGGGCCGCGGCGTGGCAGCGACGGGCCGACCTATGGCCACGGCCACGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCGGGGCCGCCAGTGGCTaGCGCGTACTTGGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: GSGPGFTLWVLWKRCTRGGAASG*RVLGPQ
Trigger: CTGCGGGCCAAGTACGCGGCAGCCACTGGCGGCCCC...GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGTGGTCCGCAGGCTCATaGGCTCCAGGCCCGGCAGCG +
Preference number: 2 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQWSAGS*APGPAA
Trigger: CGCTGCCGGGCCTGGAGCGCATGAGCCTGCGGACCA...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGGCCCCGGGGCTGGACTaGCACAGCCCGGAGCTCTCG +
Preference number: 2 (lower is better)
Translates to: PGGEAAWCSACVESARPMAPGLD*HSPELS
Trigger: CGAGAGCTCCGGGCTGTGTCAGTCCAGCCCCGGGGC...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GCCCTGGGAGGGGGCTCCGCTGCGGGGCTGCAGGTGTGGCTGCGTGCTGTCCAGGCTTCTGCTCCCGCGTaGAGGCCTGCCAGCGGCACA +
Preference number: 2 (lower is better)
Translates to: ALGGGSAAGLQVWLRAVQASAPA*RPASGT
Trigger: TGTGCCGCTGGCAGGCCTGCACGCGGGAGCAGAAGC...CTGGACAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCCAGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp GTTGAGCAGCCCGGAGCCGCCGCTGCACTGGCTGGCCTCGCTCGAGCGCCGCGACGGCCTGGCTGGTGCTaGTGGCCTCGGTGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: VEQPGAAAALAGLARAPRRPGWC*WPRCSL
Trigger: CAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCG...TCGCGGCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTCCGGGCTGCTCAAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGCCACGGCCTGGCTGGTaGTGCTGGCCTCGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQPRPGW*CWPRCS
Trigger: AGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGG...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GTTGAGCAGCCCGGAGCCGCCGCTGCACTGGCTGGCCTCGCTCGAGCGCCGCGACCTGGCTGGTGCTGCTaGCCTCGGTGCTCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: VEQPGAAAALAGLARAPRPGWCC*PRCSLG
Trigger: GCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGG...TCGCGGCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTCCGGGCTGCTCAAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CCAGACACCTGGCCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGTGAGGGCCATGGGCTaGTGGGCCAGGAAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: PDTWPCVSARGEAGRRPSVRAMG*WARKVG
Trigger: ACCCACCTTCCTGGCCCAGCAGCCCATGGCCCTCAC...TGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR-3UTR GCA 90 bp ACAGCGCCCGCTTGCGGCTCAGGCGGGGCGTCACCCGCGGGCTGGAGAAACGGGTCAGCCAGCTGCTCCTaGGTCAGCGCCAGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: TAPACGSGGASPAGWRNGSASCS*VSARGE
Trigger: CTCCCCTCTGGCGCTGACGCAGGAGCAGCTGGCTGA...CCCGTTTCTCCAGCCCGCGGGTGACGCCCCGCCTGAGCCGCAAGCGGGCGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR GCA 90 bp TGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCCGGCTTCTGCTCCCGCGTaGAGGCCTGCCAGCGGCACA +
Preference number: 2 (lower is better)
Translates to: WSPRSRTAPTAAGSAAAPASAPA*RPASGT
Trigger: TGTGCCGCTGGCAGGCCTGCACGCGGGAGCAGAAGC...CGGGGCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGGATGCCCTGGGAGGGGGCTCCGCTGCGGGGCTGCAGGTGTGGCTGCGTGCTGGCCTTGAAGGGCTTCTaGTCCCGCGTGCAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: GMPWEGAPLRGCRCGCVLALKGF*SRVQAC
Trigger: GCAGGCCTGCACGCGGGAGCAGAAGCCCTTCAAGGC...CAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCCAGGGCATCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGGCCTTGAAGGGCTTCTaGTCCCGCGTGCAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQALKGF*SRVQAC
Trigger: GCAGGCCTGCACGCGGGAGCAGAAGCCCTTCAAGGC...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTTGAGCAGCCCGGAGCCGCCGCTGCACTGGCTGGCCTCGCTCGAGCGCCGCGAGCCTTGAAGGGCTTCTaGTCCCGCGTGCAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: VEQPGAAAALAGLARAPRALKGF*SRVQAC
Trigger: GCAGGCCTGCACGCGGGAGCAGAAGCCCTTCAAGGC...TCGCGGCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTCCGGGCTGCTCAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCCCACGGCCTGGCTGGTaGTGCTGGCCTCGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: GSGPGFTLWVLWKRCTRGPRPGW*CWPRCS
Trigger: AGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGG...GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GCCCTGGGAGGGGGCTCCGCTGCGGGGCTGCAGGTGTGGCTGCGTGCTGTCCAGGATACACCTGCCCGGTaGCCTCGTCCAGAGCGCCAC +
Preference number: 2 (lower is better)
Translates to: ALGGGSAAGLQVWLRAVQDTPAR*PRPERH
Trigger: GTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATC...CTGGACAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCCAGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp CCGCGTGGCCGTGGCCATAGGTCGGCCCGTCGCTGCCACGCCGCGGCCCCAGTGCGCGGTCCGAGGCGTTaGAGAAGGCTTTGTTGCAGC +
Preference number: 2 (lower is better)
Translates to: PRGRGHRSARRCHAAAPVRGPRR*RRLCCS
Trigger: GCTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCG...CACTGGGGCCGCGGCGTGGCAGCGACGGGCCGACCTATGGCCACGGCCACGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTCGGCGCTCCTGCAGCTaGCTCAGCATGGTCACCTCG +
Preference number: 2 (lower is better)
Translates to: EALHPRQGQGIGPPHRVARRSCS*LSMVTS
Trigger: CGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCG...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTGCATGTACTGCGCCTTaGAGGGCTTCTGCTCCCGCG +
Preference number: 2 (lower is better)
Translates to: EALHPRQGQGIGPPHRVAACTAP*RASAPA
Trigger: CGCGGGAGCAGAAGCCCTTCAAGGCGCAGTACATGC...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CATAGGGGCGGAGGGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCTGCTGCTGGCCTCGGTaGTCTCTGGGCCGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: HRGGGAHVGVRSHHPALACCWPR*SLGRQA
Trigger: AGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCA...GGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCGAGAGGGCTCGCTGCTaGAGGACGACTGGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGERARC*RTTGPR
Trigger: CCGGGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTC...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGGATGCCCTGGGAGGGGGCTCCGCTGCGGGGCTGCAGGTGTGGCTGCGTGCTGCATTGTTGGGGGCACTaGCCAGAGGAGAGGGCTCGC +
Preference number: 2 (lower is better)
Translates to: GMPWEGAPLRGCRCGCVLHCWGH*PEERAR
Trigger: GCGAGCCCTCTCCTCTGGGCAGTGCCCCCAACAATG...CAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCCAGGGCATCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGTGGTCCGCAGGCTCATaGGCTCCAGGCCCGGCAGCG +
Preference number: 2 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRWSAGS*APGPAA
Trigger: CGCTGCCGGGCCTGGAGCGCATGAGCCTGCGGACCA...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGAGGGCCATGGGCTGCTaGGCCAGGAAGGTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: RQRGGRPQALRLGLDLAARAMGC*ARKVGE
Trigger: CTCACCCACCTTCCTGGCCCAGCAGCCCATGGCCCT...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTGGCCTCGGTGCTCTCTaGGCCGCCAGGCTCCGTGCC +
Preference number: 2 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPGLGAL*AARLRA
Trigger: GGCACGGAGCCTGGCGGCCCAGAGAGCACCGAGGCC...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp TCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGGGCGGCGGAGGGGAGGCAGCTTaGTGTTCCGCGTGTGTGGAG +
Preference number: 2 (lower is better)
Translates to: SVLGWLCRRRPRLSAQGGGGEAA*CSACVE
Trigger: CTCCACACACGCGGAACACCAAGCTGCCTCCCCTCC...GCCGCCCTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGGAGATGGGGTGCGCTaGCAGCGCCCCCGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: QRGGRPQALRLGLDLAALGDGVR*QRPRSA
Trigger: TGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCC...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR TCA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGGTCCAGGCTGGCGTCTaGGAGTGGGGAGATGGACAG +
Preference number: 2 (lower is better)
Translates to: RQRGGRPQALRLGLDLAAVQAGV*EWGDGQ
Trigger: CTGTCCATCTCCCCACTCTCAGACGCCAGCCTGGAC...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR GCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCGCTTCTGCTCCCGCGTaGAGGCCTGCCAGCGGCACA +
Preference number: 2 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGASAPA*RPASGT
Trigger: TGTGCCGCTGGCAGGCCTGCACGCGGGAGCAGAAGC...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGTGCTGCTGGCCTCGGTaGTCTCTGGGCCGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: GEAAWCSACVESARPMSRCCWPR*SLGRQA
Trigger: AGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCA...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CCCATCGGGCCTGTTTGGGGCTCCATGAAGCCAGGCTGGCGGGCAGGCAGAAGGGCTCCGCTGCGGGGCTaGAGGTGTGGCTGCGTGCTG +
Preference number: 2 (lower is better)
Translates to: PIGPVWGSMKPGWRAGRRAPLRG*RCGCVL
Trigger: CAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGC...CCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCAGACACCTGGCCCTaGGTCAGCGCCAGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSPDTWP*VSARGE
Trigger: CTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR-3UTR GCA 90 bp AGCGCCCGCTTGCGGCTCAGGCGGGGCGTCACCCGCGGGCTGGAGAAACGGGACGCTGAGGCCCCTGGCTaGAGAGATCATGGAGAGCGT +
Preference number: 2 (lower is better)
Translates to: SARLRLRRGVTRGLEKRDAEAPG*RDHGER
Trigger: ACGCTCTCCATGATCTCTGCAGCCAGGGGCCTCAGC...GTCCCGTTTCTCCAGCCCGCGGGTGACGCCCCGCCTGAGCCGCAAGCGGGCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR CCA 90 bp GTCGTGGAGATGGGGTGCGCTGGCAGCGCCCCCGCTCTGCATCAGCAGGTCCCCAGGGCCATGGGCTGCTaGGCCAGGAAGGTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: VVEMGCAGSAPALHQQVPRAMGC*ARKVGE
Trigger: CTCACCCACCTTCCTGGCCCAGCAGCCCATGGCCCT...GGGGACCTGCTGATGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR CCA 90 bp ACAGCGCCCGCTTGCGGCTCAGGCGGGGCGTCACCCGCGGGCTGGAGAAACGGGCTGCTGCTGCTGAGCTaGGTGGGCGTGGCATTGATG +
Preference number: 2 (lower is better)
Translates to: TAPACGSGGASPAGWRNGLLLLS*VGVALM
Trigger: CATCAATGCCACGCCCACCCAGCTCAGCAGCAGCAG...CCCGTTTCTCCAGCCCGCGGGTGACGCCCCGCCTGAGCCGCAAGCGGGCGCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR CCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGCTGCTGCTGCTGAGCTaGGTGGGCGTGGCATTGATG +
Preference number: 2 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQLLLLS*VGVALM
Trigger: CATCAATGCCACGCCCACCCAGCTCAGCAGCAGCAG...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCACTGGGCCCCGGGGCTaGACTGACACAGCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSTGPRG*TDTARS
Trigger: GCTCCGGGCTGTGTCAGTCCAGCCCCGGGGCCCAGT...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CCGCGTGGCCGTGGCCATAGGTCGGCCCGTCGCTGCCACGCCGCGGCCCCAGTGGCTCGAACCGGTGCATaGTGGTCATGTGTTTGCGCA +
Preference number: 2 (lower is better)
Translates to: PRGRGHRSARRCHAAAPVARTGA*WSCVCA
Trigger: TGCGCAAACACATGACCACCATGCACCGGTTCGAGC...CACTGGGGCCGCGGCGTGGCAGCGACGGGCCGACCTATGGCCACGGCCACGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGCCGTGTCCAGACACCTaGCCCTGCGTCAGCGCCAGA +
Preference number: 2 (lower is better)
Translates to: PGGEAAWCSACVESARPMPCPDT*PCVSAR
Trigger: TCTGGCGCTGACGCAGGGCCAGGTGTCTGGACACGG...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR-3UTR TCA 90 bp TTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCGCCCCGGGGCTGGACTaGCACAGCCCGGAGCTCTCG +
Preference number: 2 (lower is better)
Translates to: LRTVARVLAKGRLLLHHRAPGLD*HSPELS
Trigger: CGAGAGCTCCGGGCTGTGTCAGTCCAGCCCCGGGGC...GCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR TCA 90 bp GACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCAGGTGCCCCGGGGCTGGACTaGCACAGCCCGGAGCTCTCG +
Preference number: 2 (lower is better)
Translates to: DCSPGTGQRQASAAPPPGAPGLD*HSPELS
Trigger: CGAGAGCTCCGGGCTGTGTCAGTCCAGCCCCGGGGC...ACCTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR TCA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGACACGTCCACGGGGTTaGGGTAGTCGTGGAGATGGG +
Preference number: 2 (lower is better)
Translates to: RQRGGRPQALRLGLDLAATRPRG*GSRGDG
Trigger: CCCATCTCCACGACTACCTCAACCCCGTGGACGTGT...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR GCA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGTCCCGCGTGCAGGCCTaGCAGCGGCACACAAACTCC +
Preference number: 2 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRSRVQA*QRHTNS
Trigger: GGAGTTTGTGTGCCGCTGGCAGGCCTGCACGCGGGA...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCTCCCGCGTGCAGGCCTaGCAGCGGCACACAAACTCC +
Preference number: 2 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGSRVQA*QRHTNS
Trigger: GGAGTTTGTGTGCCGCTGGCAGGCCTGCACGCGGGA...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCTGGGTGCGATTCTGGTaGTTGGCGCGGTCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSWVRFW*LARSEA
Trigger: CGCCTCGGACCGCGCCAAGCACCAGAATCGCACCCA...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGTGGGTGCGATTCTGGTaGTTGGCGCGGTCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: GEAAWCSACVESARPMSRWVRFW*LARSEA
Trigger: CGCCTCGGACCGCGCCAAGCACCAGAATCGCACCCA...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCGGCCGCCAGGCTCCGTaGCGGCCTCACTGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: EASAFRGIHLPGALVQSAGRQAP*RPHCPH
Trigger: ATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCC...GGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGGCCTGGCTGGTGCTaGTGGCCTCGGTGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: AGGAVAALLQLAQHGHLARPGWC*WPRCSL
Trigger: CAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCG...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTGAGGAGAGGGCTCGCTaGTGCAGGACGACTGGGCCC +
Preference number: 2 (lower is better)
Translates to: AGGAVAALLQLAQHGHLAEERAR*CRTTGP
Trigger: GGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTCCTC...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGGAGGAGAGGGCTCGCTaGTGCAGGACGACTGGGCCC +
Preference number: 2 (lower is better)
Translates to: AFRGIHLPGALVQSATGVEERAR*CRTTGP
Trigger: GGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTCCTC...CACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGGCGAGTTGGGTGAGGTaGGGATCATCCGCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: RQRGGRPQALRLGLDLAAASWVR*GSSAAG
Trigger: ACCTGCAGCGGATGATCCGCACCTCACCCAACTCGC...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR CCA 90 bp CAGGGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCGCAGCTGGCTCAGCATaGTCACCTCGCTCGCGGACA +
Preference number: 2 (lower is better)
Translates to: QGGSGPGFTLWVLWKRCTAAGSA*SPRSRT
Trigger: TGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGC...GGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CCCGCTTGCGGCTCAGGCGGGGCGTCACCCGCGGGCTGGAGAAACGGGACACGTTCCTTAAGGTGCTCCTaGGCCACATCAGCGGGGCTG +
Preference number: 2 (lower is better)
Translates to: PACGSGGASPAGWRNGTRSLRCS*ATSAGL
Trigger: CAGCCCCGCTGATGTGGCCCAGGAGCACCTTAAGGA...ACGTGTCCCGTTTCTCCAGCCCGCGGGTGACGCCCCGCCTGAGCCGCAAGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR TCA 90 bp GGCCGTAGTAGTAGAGCATGCTGTGGTCCGGGGCCCCACCTGCGTCCTGCGGAGCGGTGTAGGCCGAGCTaGCCGTGCTGGTGGAGCTGT +
Preference number: 2 (lower is better)
Translates to: GRSSRACCGPGPHLRPAERCRPS*PCWWSC
Trigger: ACAGCTCCACCAGCACGGTCAGCTCGGCCTACACCG...CTCCGCAGGACGCAGGTGGGGCCCCGGACCACAGCATGCTCTACTACTACGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR TCA 90 bp CCCATCGGGCCTGTTTGGGGCTCCATGAAGCCAGGCTGGCGGGCAGGCAGAAGGCGGTGTAGGCCGAGCTaGCCGTGCTGGTGGAGCTGT +
Preference number: 2 (lower is better)
Translates to: PIGPVWGSMKPGWRAGRRRCRPS*PCWWSC
Trigger: ACAGCTCCACCAGCACGGTCAGCTCGGCCTACACCG...CCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp CAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTGCCTTGAAGGGCTTCTaGTCCCGCGTGCAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: QLAQHGHLARGQLRQPRVALKGF*SRVQAC
Trigger: GCAGGCCTGCACGCGGGAGCAGAAGCCCTTCAAGGC...AACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp TCTCCCAGGCTCCCGGGCCCCGTCCCCGGCATCTCCACGCCACTGTCATTGTTGTGGGTGCGATTCTGGTaGTTGGCGCGGTCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: SPRLPGPVPGISTPLSLLWVRFW*LARSEA
Trigger: CGCCTCGGACCGCGCCAAGCACCAGAATCGCACCCA...CAACAATGACAGTGGCGTGGAGATGCCGGGGACGGGGCCCGGGAGCCTGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCTGCTGCTGGCCTCGGTaGTCTCTGGGCCGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: EASAFRGIHLPGALVQSACCWPR*SLGRQA
Trigger: AGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCA...GGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGCATTGTTGGGGGCACTaGCCAGAGGAGAGGGCTCGC +
Preference number: 2 (lower is better)
Translates to: GEAAWCSACVESARPMSRHCWGH*PEERAR
Trigger: GCGAGCCCTCTCCTCTGGGCAGTGCCCCCAACAATG...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CATAGGGGCGGAGGGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCGGGTGTGTCATCCAGTaGCGTCAGGTCTCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: HRGGGAHVGVRSHHPALAGCVIQ*RQVSQA
Trigger: AGCCTGGGAGACCTGACGGCACTGGATGACACACCC...GGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp TGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCCGTGGTGGTCATGTGTTTaGGCAGCTGGAGGCCACCAG +
Preference number: 2 (lower is better)
Translates to: WSPRSRTAPTAAGSAAAPWWSCV*AAGGHQ
Trigger: CTGGTGGCCTCCAGCTGCGCAAACACATGACCACCA...CGGGGCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGCGCAGGCTGTACTGCTaGGCCGGCGTGAGGTTGAGC +
Preference number: 2 (lower is better)
Translates to: VLSVGYTCPVPSSRAPLARRLYC*AGVRLS
Trigger: GCTCAACCTCACGCCGGCGCAGCAGTACAGCCTGCG...CGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CATAGGGGCGGAGGGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCAGAGCGCCACTGGCGTaGGCCTTGATGTACTGCACC +
Preference number: 2 (lower is better)
Translates to: HRGGGAHVGVRSHHPALARAPLA*ALMYCT
Trigger: GGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT...GGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GAGGCGGCTGGGGAGGCACCGACCCCATGTTGCCCATCGCTCCCTTGGGCACAGTCCGTGGGATACACCTaGCCGGTGCCCTCGTCCAGA +
Preference number: 2 (lower is better)
Translates to: EAAGEAPTPCCPSLPWAQSVGYT*PVPSSR
Trigger: TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGA...CTGTGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCCTCCCCAGCCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp GTAGGCCTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCGCAGCCACCATCCTaGGCTGGCCGTGCAGCCCCG +
Preference number: 2 (lower is better)
Translates to: VGLADCSPGTGQRQASAAPQPPS*AGRAAP
Trigger: CGGGGCTGCACGGCCAGCGCAGGATGGTGGCTGCGG...TGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAGGCCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTAGGGCCATGGGCTGCTaGGCCAGGAAGGTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPRAMGC*ARKVGE
Trigger: CTCACCCACCTTCCTGGCCCAGCAGCCCATGGCCCT...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGCGCGGTCCGAGGCGTTaGAGAAGGCTTTGTTGCAGC +
Preference number: 2 (lower is better)
Translates to: PGGEAAWCSACVESARPMRGPRR*RRLCCS
Trigger: GCTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCG...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTTGCGATTCTGGTGCTTaGCGCGGTCCGAGGCGTTGG +
Preference number: 2 (lower is better)
Translates to: QRGGRPQALRLGLDLAALCDSGA*RGPRRW
Trigger: CCAACGCCTCGGACCGCGCCAAGCACCAGAATCGCA...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCCCTGGCTGGTGCTGCTaGCCTCGGTGCTCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: VHVVGAVEALHPRQGQGIPGWCC*PRCSLG
Trigger: GCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGG...GATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTGCTCGAACCGGTGCATaGTGGTCATGTGTTTGCGCA +
Preference number: 2 (lower is better)
Translates to: EALHPRQGQGIGPPHRVAARTGA*WSCVCA
Trigger: TGCGCAAACACATGACCACCATGCACCGGTTCGAGC...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCAGCTGGCTCAGCATaGTCACCTCGCTCGCGGACA +
Preference number: 2 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRAAGSA*SPRSRT
Trigger: TGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGC...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTGACGTTGTGGGTGCTGTaGAAGCGCTGCACCCGCGGC +
Preference number: 2 (lower is better)
Translates to: HLPGALVQSATGVRLDVLTLWVL*KRCTRG
Trigger: GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGT...CAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGAATAGTCTGAGGGGGTaGTGCCTGGAGCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: RQRGGRPQALRLGLDLAANSLRG*CLEQEG
Trigger: GCCTTCCTGCTCCAGGCACCACCCCCTCAGACTATT...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR TCA 90 bp GTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGGCATGTACTGCGCCTTaGAGGGCTTCTGCTCCCGCG +
Preference number: 2 (lower is better)
Translates to: VLSVGYTCPVPSSRAPLAACTAP*RASAPA
Trigger: CGCGGGAGCAGAAGCCCTTCAAGGCGCAGTACATGC...CGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp TGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCCGACCACCTCAGCCTCCTaGTTACAGTCATCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: WSPRSRTAPTAAGSAAAPTTSAS*LQSSLS
Trigger: GGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT...CGGGGCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTTGTCGTACTCCTTGGTaGAGTCTTCCCAGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: EALHPRQGQGIGPPHRVACRTPW*SLPSGS
Trigger: ACTGCCACTGGGAAGACTGCACCAAGGAGTACGACA...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGCCGCCAGGCTCCGTaGCGGCCTCACTGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSGRQAP*RPHCPH
Trigger: ATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCC...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGAGAGGGCTCGCTGCTaGAGGACGACTGGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSERARC*RTTGPR
Trigger: CCGGGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTC...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGCCGTAGTAGTAGAGCATGCTGTGGTCCGGGGCCCCACCTGCGTCCTGCGGAGCATTGTTGGGGGCACTaGCCAGAGGAGAGGGCTCGC +
Preference number: 2 (lower is better)
Translates to: GRSSRACCGPGPHLRPAEHCWGH*PEERAR
Trigger: GCGAGCCCTCTCCTCTGGGCAGTGCCCCCAACAATG...CTCCGCAGGACGCAGGTGGGGCCCCGGACCACAGCATGCTCTACTACTACGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp CTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGATCCTGCGCTGGCCGTaGAGCCCCGGGCTGGGTAGT +
Preference number: 2 (lower is better)
Translates to: LADCSPGTGQRQASAAPPILRWP*SPGLGS
Trigger: ACTACCCAGCCCGGGGCTGCACGGCCAGCGCAGGAT...CGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp CCCATCGGGCCTGTTTGGGGCTCCATGAAGCCAGGCTGGCGGGCAGGCAGAAGGTGCCAGGACACTGGCTaGCTGCCACTGGCTGTCGCA +
Preference number: 2 (lower is better)
Translates to: PIGPVWGSMKPGWRAGRRCQDTG*LPLAVA
Trigger: TGCGACAGCCAGTGGCAGGCAGCCAGTGTCCTGGCA...CCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp GACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGAGGGCGCGGGGTGGCCTaGCACGAGGGTCATCTGGTG +
Preference number: 2 (lower is better)
Translates to: DLAALVNGDRVDGAADGRGRGVA*HEGHLV
Trigger: CACCAGATGACCCTCGTGGCAGGCCACCCCGCGCCC...TCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR CCA 90 bp GTCGTGGAGATGGGGTGCGCTGGCAGCGCCCCCGCTCTGCATCAGCAGGTCCCCAAGGTGGGTGAGGGCTaGATCAGGGGTGGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: VVEMGCAGSAPALHQQVPKVGEG*IRGGVC
Trigger: ACACACACCACCCCTGATCCAGCCCTCACCCACCTT...GGGGACCTGCTGATGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR CCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGCTGCTGCTGCTGAGCTaGGTGGGCGTGGCATTGATG +
Preference number: 2 (lower is better)
Translates to: GEAAWCSACVESARPMSRLLLLS*VGVALM
Trigger: CATCAATGCCACGCCCACCCAGCTCAGCAGCAGCAG...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCGCGGTCCGAGGCGTTaGAGAAGGCTTTGTTGCAGC +
Preference number: 2 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGRGPRR*RRLCCS
Trigger: GCTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCG...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTTGCGATTCTGGTGCTTaGCGCGGTCCGAGGCGTTGG +
Preference number: 2 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPCDSGA*RGPRRW
Trigger: CCAACGCCTCGGACCGCGCCAAGCACCAGAATCGCA...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CGCGCCGTCCACTCCTGCCGCCACGGCCTCCATCGCCACGTTCTCGCTGATGCTGGTGACGTGGGCATCTaGGCCGTGGACCGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: RAVHSCRHGLHRHVLADAGDVGI*AVDRFH
Trigger: GTGAAAACGGTCCACGGCCCAGATGCCCACGTCACC...AGCATCAGCGAGAACGTGGCGATGGAGGCCGTGGCGGCAGGAGTGGACGGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGACCTGGCTGGTGCTGCTaGCCTCGGTGCTCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGPGWCC*PRCSLG
Trigger: GCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGG...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp TGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCCGCGAACCGGTGCATGGTaGTCATGTGTTTGCGCAGCT +
Preference number: 2 (lower is better)
Translates to: WSPRSRTAPTAAGSAAAPRTGAW*SCVCAA
Trigger: AGCTGCGCAAACACATGACCACCATGCACCGGTTCG...CGGGGCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTGGAGGGGAGGCAGCTTaGTGTTCCGCGTGTGTGGAG +
Preference number: 2 (lower is better)
Translates to: AGGAVAALLQLAQHGHLAGGEAA*CSACVE
Trigger: CTCCACACACGCGGAACACCAAGCTGCCTCCCCTCC...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CAA 90 bp TACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTaGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCC +
Preference number: 2 (lower is better)
Translates to: YTCPVPSSRAPLACA*MYCTTSSGSTRSSS
Trigger: GGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CAA 90 bp ACCATCCTGCGCTGGCCGTGCAGCCCCGGGCTGGGTAGTCTGGGGTaGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTG +
Preference number: 2 (lower is better)
Translates to: TILRWPCSPGLGSLG*SEKPVLSVGYTCPV
Trigger: CACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCGCAGGATGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp GGTGCTCTCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGCATGTACTGCGCCTTaGAGGGCTTCTGCTCCCGCG +
Preference number: 2 (lower is better)
Translates to: GALWAARLRAGLTVPILFACTAP*RASAPA
Trigger: CGCGGGAGCAGAAGCCCTTCAAGGCGCAGTACATGC...AAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGAGAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCTGTCCCCATTCTCTTTaGGCAGCGGTGTGCGGAGGT +
Preference number: 2 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGCPHSL*AAVCGG
Trigger: ACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACA...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp CACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTGAAGGGCACACCCACATaGGCCGTGTCCAGACACCTG +
Preference number: 2 (lower is better)
Translates to: HLPGALVQSATGVRLDVLKGTPT*AVSRHL
Trigger: CAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTT...CAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000445186.5
3UTR-3UTR GCA 90 bp CACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGTCCTCCACGGTGAGGGCCATGGGCTaGTGGGCCAGGAAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: HSPELSVLMALTCRQSSTVRAMG*WARKVG
Trigger: ACCCACCTTCCTGGCCCAGCAGCCCATGGCCCTCAC...CGTGGAGGACTGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCGGGCTTCTGCTCCCGCGTaGAGGCCTGCCAGCGGCACA +
Preference number: 2 (lower is better)
Translates to: VRLDVLHHVVWKHQVVLRASAPA*RPASGT
Trigger: TGTGCCGCTGGCAGGCCTGCACGCGGGAGCAGAAGC...CCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGTGGGTGCGATTCTGGTaGTTGGCGCGGTCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: LADCSPGTGQRQASAAPPWVRFW*LARSEA
Trigger: CGCCTCGGACCGCGCCAAGCACCAGAATCGCACCCA...CGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTCTGTGTATCTCTTGGTaGAGCCTGGGATCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: EALHPRQGQGIGPPHRVALCISW*SLGSCR
Trigger: TCTGCAAGATCCCAGGCTGCACCAAGAGATACACAG...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp TCTCCCAGGCTCCCGGGCCCCGTCCCCGGCATCTCCACGCCACTGTCATTGTTGAGCGGTGTGCGGAGGTaGACGTCATTGCGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: SPRLPGPVPGISTPLSLLSGVRR*TSLRCF
Trigger: GAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT...CAACAATGACAGTGGCGTGGAGATGCCGGGGACGGGGCCCGGGAGCCTGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GCTGGACTGACACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCATGCTGCTGGCCTCGGTaGTCTCTGGGCCGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: AGLTQPGALGLDGSDVQACCWPR*SLGRQA
Trigger: AGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCA...TGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTGTCAGTCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCGGCGGCCTGGCTGGTGCTaGTGGCCTCGGTGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: VRLDVLHHVVWKHQVVLRRPGWC*WPRCSL
Trigger: CAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCG...CCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCAC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGACCACGGCCTGGCTGGTaGTGCTGGCCTCGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: LEPVHGGHVFAQLEATSGPRPGW*CWPRCS
Trigger: AGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGG...TCCGCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTTTGATGGCTCTGACGTaGAGGCAGTCCTCCACGGCC +
Preference number: 2 (lower is better)
Translates to: AGGAVAALLQLAQHGHLALMALT*RQSSTA
Trigger: GGCCGTGGAGGACTGCCTGCACGTCAGAGCCATCAA...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CGCTGGCCGTGCAGCCCCGGGCTGGGTAGTCTGGGGTTGTCAGAGAAGCCAGTGGGTTCACGTTGTGGGTaGTGTGGAAGCGCTGCACCC +
Preference number: 2 (lower is better)
Translates to: RWPCSPGLGSLGLSEKPVGSRCG*CGSAAP
Trigger: GGGTGCAGCGCTTCCACAGCACCCACAACGTGAACC...CACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCGATACACCTGCCCGGTaGCCTCGTCCAGAGCGCCAC +
Preference number: 2 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGDTPAR*PRPERH
Trigger: GTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATC...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp ATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCAGGGCCATGGGCTGCTaGGCCAGGAAGGTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: MEPLPGRGGSLVFRVCGVRAMGC*ARKVGE
Trigger: CTCACCCACCTTCCTGGCCCAGCAGCCCATGGCCCT...GACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GTTGAGCAGCCCGGAGCCGCCGCTGCACTGGCTGGCCTCGCTCGAGCGCCGCGACTGCTCTGCTTGTTCTaGTTGGTGTCACTCAGACAG +
Preference number: 2 (lower is better)
Translates to: VEQPGAAAALAGLARAPRLLCLF*LVSLRQ
Trigger: CTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAG...TCGCGGCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTCCGGGCTGCTCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CCAGACACCTGGCCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCACTGCTCTGCTTGTTCTaGTTGGTGTCACTCAGACAG +
Preference number: 2 (lower is better)
Translates to: PDTWPCVSARGEAGRRPSLLCLF*LVSLRQ
Trigger: CTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAG...TGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR-3UTR CCA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTTCCTTCTTCTCCCCGTaGATGTGCTCGTTGTTGATG +
Preference number: 2 (lower is better)
Translates to: EALHPRQGQGIGPPHRVASFFSP*MCSLLM
Trigger: CATCAACAACGAGCACATCCACGGGGAGAAGAAGGA...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCCGGCGCTCCTGCAGCTaGCTCAGCATGGTCACCTCG +
Preference number: 2 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCRRSCS*LSMVTS
Trigger: CGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCG...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTGCTGCACCACGTCGTCTaGAAGCACCAGGTCGTCCTC +
Preference number: 2 (lower is better)
Translates to: HLPGALVQSATGVRLDVLLHHVV*KHQVVL
Trigger: GAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAG...CAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CCCCTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCACGTGCAGCCCCGGGCTaGGTAGTCTGGGGTTGTCAG +
Preference number: 2 (lower is better)
Translates to: PLRVHSAPGARASRSSCSRAAPG*VVWGCQ
Trigger: CTGACAACCCCAGACTACCCAGCCCGGGGCTGCACG...TGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp ATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCCCGTGTCCAGACACCTaGCCCTGCGTCAGCGCCAGA +
Preference number: 2 (lower is better)
Translates to: MEPLPGRGGSLVFRVCGVPCPDT*PCVSAR
Trigger: TCTGGCGCTGACGCAGGGCCAGGTGTCTGGACACGG...GACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR-3UTR CCA 90 bp TTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCCGTGTCCAGACACCTaGCCCTGCGTCAGCGCCAGA +
Preference number: 2 (lower is better)
Translates to: LRTVARVLAKGRLLLHHRPCPDT*PCVSAR
Trigger: TCTGGCGCTGACGCAGGGCCAGGTGTCTGGACACGG...GCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445186.5
3UTR-3UTR CCA 90 bp CGGGCTGGAGAAACGGGACACGTCCACGGGGTTGAGGTAGTCGTGGAGATGGGGGGGTTCACGTACGGGTaGGGGGCGTTGAAGGGGGAC +
Preference number: 2 (lower is better)
Translates to: RAGETGHVHGVEVVVEMGGFTYG*GALKGD
Trigger: GTCCCCCTTCAACGCCCCCCACCCGTACGTGAACCC...CCCCATCTCCACGACTACCTCAACCCCGTGGACGTGTCCCGTTTCTCCAGCCCG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR CAA 90 bp TCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTaGAGCAGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: SGPPGSVPASLSPFS*SSGVRRCTSLRCFL
Trigger: CAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTTGTCCCCATTCTCTTTaGGCAGCGGTGTGCGGAGGT +
Preference number: 2 (lower is better)
Translates to: AGGAVAALLQLAQHGHLACPHSL*AAVCGG
Trigger: ACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACA...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCGGCTGGATGCTGTCCTaGCAGGCCTGTGGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGGWMLS*QACGCG
Trigger: ACCACAGCCACAGGCCTGTCAGGACAGCATCCAGCC...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCCGACTCACTGCTCTaGTTGTTCTGGTTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: QRQRGGRPQALRLGLDLAADSLL*LFWLVS
Trigger: TGACACCAACCAGAACAAGCAGAGCAGTGAGTCGGC...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGTCCCGCGTGCAGGCCTaGCAGCGGCACACAAACTCC +
Preference number: 2 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLSRVQA*QRHTNS
Trigger: GGAGTTTGTGTGCCGCTGGCAGGCCTGCACGCGGGA...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCGGTGGGTGCGATTCTGGTaGTTGGCGCGGTCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: VRLDVLHHVVWKHQVVLRWVRFW*LARSEA
Trigger: CGCCTCGGACCGCGCCAAGCACCAGAATCGCACCCA...CCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGTGCACGTCATTGCGCTaGTTCTTGGTGACGTGGGCA +
Preference number: 2 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRCTSLR*FLVTWA
Trigger: TGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCA...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGCAGCTCCCGAGGTTCTCCAGGCCTCCATCCTGTTCGTACATGTGGATCTGGCGAGGAGAGGGCTCGCTaGTGCAGGACGACTGGGCCC +
Preference number: 2 (lower is better)
Translates to: GSSRGSPGLHPVRTCGSGEERAR*CRTTGP
Trigger: GGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTCCTC...GCCAGATCCACATGTACGAACAGGATGGAGGCCTGGAGAACCTCGGGAGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp CTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAGGACTGTCGCGGCGCTCCTaGAGCTGGCTCAGCATGGTC +
Preference number: 2 (lower is better)
Translates to: LRVHSAPGARASRSSCSGLSRRS*SWLSMV
Trigger: GACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAG...TCCTGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGGTCCGCAGGCTCATaGGCTCCAGGCCCGGCAGCG +
Preference number: 2 (lower is better)
Translates to: VVWGCQRSQCFPWDTPARWSAGS*APGPAA
Trigger: CGCTGCCGGGCCTGGAGCGCATGAGCCTGCGGACCA...CCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCAGAGAGCGCCACTGGCGTaGGCCTTGATGTACTGCACC +
Preference number: 2 (lower is better)
Translates to: RTVARVLAKGRLLLHHRQRAPLA*ALMYCT
Trigger: GGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT...CTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTGCTCTGCTTGTTCTaGTTGGTGTCACTCAGACAG +
Preference number: 2 (lower is better)
Translates to: RQRGGRPQALRLGLDLAALLCLF*LVSLRQ
Trigger: CTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAG...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCCGCGGTCCGAGGCGTTaGAGAAGGCTTTGTTGCAGC +
Preference number: 2 (lower is better)
Translates to: VHVVGAVEALHPRQGQGIRGPRR*RRLCCS
Trigger: GCTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCG...GATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GAGGCGGCTGGGGAGGCACCGACCCCATGTTGCCCATCGCTCCCTTGGGCACAGCGAACCGGTGCATGGTaGTCATGTGTTTGCGCAGCT +
Preference number: 2 (lower is better)
Translates to: EAAGEAPTPCCPSLPWAQRTGAW*SCVCAA
Trigger: AGCTGCGCAAACACATGACCACCATGCACCGGTTCG...CTGTGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCCTCCCCAGCCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp CGCGCCGTCCACTCCTGCCGCCACGGCCTCCATCGCCACGTTCTCGCTGATGCTCGAACCGGTGCATGGTaGTCATGTGTTTGCGCAGCT +
Preference number: 2 (lower is better)
Translates to: RAVHSCRHGLHRHVLADARTGAW*SCVCAA
Trigger: AGCTGCGCAAACACATGACCACCATGCACCGGTTCG...AGCATCAGCGAGAACGTGGCGATGGAGGCCGTGGCGGCAGGAGTGGACGGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp TTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCCGGGGTTCACGTTGTaGGTGCTGTGGAAGCGCTGC +
Preference number: 2 (lower is better)
Translates to: LRTVARVLAKGRLLLHHRPGFTL*VLWKRC
Trigger: GCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG...GCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp CTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAGGACGTGCAGCCCCGGGCTaGGTAGTCTGGGGTTGTCAG +
Preference number: 2 (lower is better)
Translates to: LRVHSAPGARASRSSCSGRAAPG*VVWGCQ
Trigger: CTGACAACCCCAGACTACCCAGCCCGGGGCTGCACG...TCCTGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGACCCTGGGGATGCCCTaGGAGGGGGCTCCGCTGCGG +
Preference number: 2 (lower is better)
Translates to: NVSREEAGTARSCKHQRLTLGMP*EGAPLR
Trigger: CCGCAGCGGAGCCCCCTCCCAGGGCATCCCCAGGGT...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CAA 90 bp CTGAAGTTTTCCAGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTaGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: LKFSRMEPLPGRGGS*VFRVCGVGPAHEQE
Trigger: TTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCTGGAAAACTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp CGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCAGACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACG +
Preference number: 2 (lower is better)
Translates to: RTVARVLAKGRLLLHHRQTLLRL*MATGLT
Trigger: CGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGT...CTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR TCA 90 bp CCCCTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCACACTGGCGTGCGCCTTaGTGTACTGCACCACGTCGT +
Preference number: 2 (lower is better)
Translates to: PLRVHSAPGARASRSSCSHWRAP*CTAPRR
Trigger: ACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTG...TGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTATCCCTAGGGCAGCCTaGGGCTGGGCCCCGGGTGCA +
Preference number: 2 (lower is better)
Translates to: REEAGTARSCKHQRLESTIPRAA*GWAPGA
Trigger: TGCACCCGGGGCCCAGCCTCAGGCTGCCCTAGGGAT...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR GCA 90 bp GTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACTCACTGCTCTGCTTGTGAGGGCCATGGGCTaGTGGGCCAGGAAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: VNGDRVDGAADGRLTALLVRAMG*WARKVG
Trigger: ACCCACCTTCCTGGCCCAGCAGCCCATGGCCCTCAC...AAGCAGAGCAGTGAGTCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCGCCGACTCACTGCTCTaGTTGTTCTGGTTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGADSLL*LFWLVS
Trigger: TGACACCAACCAGAACAAGCAGAGCAGTGAGTCGGC...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCTGTCGTACTCCTTGGTaGAGTCTTCCCAGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGCRTPW*SLPSGS
Trigger: ACTGCCACTGGGAAGACTGCACCAAGGAGTACGACA...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGCTTCTGCTCCCGCGTaGAGGCCTGCCAGCGGCACA +
Preference number: 2 (lower is better)
Translates to: GLDLAALVNGDRVDGAADASAPA*RPASGT
Trigger: TGTGCCGCTGGCAGGCCTGCACGCGGGAGCAGAAGC...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTTGCAGCCTGGGATCTTaGAGATGTAGGGTTTCTCGT +
Preference number: 2 (lower is better)
Translates to: QRQRGGRPQALRLGLDLACSLGS*RCRVSR
Trigger: ACGAGAAACCCTACATCTGCAAGATCCCAGGCTGCA...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCACGTCATTGCGCTaGTTCTTGGTGACGTGGGCA +
Preference number: 2 (lower is better)
Translates to: VLSVGYTCPVPSSRAPLACTSLR*FLVTWA
Trigger: TGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCA...CGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGAGGCTGGGGCTCAGAGCACCCGAGAACAAACTCGAGTGATCGCCATCATCCACGGCCTGGCTGGTGCTaGTGGCCTCGGTGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: GGWGSEHPRTNSSDRHHPRPGWC*WPRCSL
Trigger: CAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCG...TGGATGATGGCGATCACTCGAGTTTGTTCTCGGGTGCTCTGAGCCCCAGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAGAGGGCTCGCTGCTaGAGGACGACTGGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: NVSREEAGTARSCKHQRLERARC*RTTGPR
Trigger: CCGGGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTC...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGAGAGGGCTCGCTGCTaGAGGACGACTGGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: REEAGTARSCKHQRLESTERARC*RTTGPR
Trigger: CCGGGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTC...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCGGGTGTGTCATCCAGTaGCGTCAGGTCTCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCGCVIQ*RQVSQA
Trigger: AGCCTGGGAGACCTGACGGCACTGGATGACACACCC...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCAGTGGTGGTCATGTGTTTaGGCAGCTGGAGGCCACCAG +
Preference number: 2 (lower is better)
Translates to: RTVARVLAKGRLLLHHRQWWSCV*AAGGHQ
Trigger: CTGGTGGCCTCCAGCTGCGCAAACACATGACCACCA...CTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTCCAGGCCGCCGTCGGTaGTCGGGTGGCTCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCPGRRR*SGGSAG
Trigger: GCCTGCAGAGCCACCCGAGCACCGACGGCGGCCTGG...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCAGAGCGCCACTGGCGTaGGCCTTGATGTACTGCACC +
Preference number: 2 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCRAPLA*ALMYCT
Trigger: GGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTAGGCCTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCAGGGCGTCTACGGTaGCGGAGCTCACCTCATTCC +
Preference number: 2 (lower is better)
Translates to: VGLADCSPGTGQRQASAAPGRLR*RSSPHS
Trigger: GGAATGAGGTGAGCTCCGGCACCGTAGACGCCCTGG...TGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAGGCCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp TTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCCAAAGGCAGGCTTCTaGTGCACCACCGCCAGGTTG +
Preference number: 2 (lower is better)
Translates to: LRTVARVLAKGRLLLHHRPKAGF*CTTARL
Trigger: CAACCTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGG...GCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCGTTCCCTGTGGCGATTaGCCATCGTGGTGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGVPCGD*PSWWGQ
Trigger: CTGACCCCACCACGATGGGCAATCGCCACAGGGAAC...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGTGGAGAGCGTGGGGCTaGTGTGCACAGAACGGAGGT +
Preference number: 2 (lower is better)
Translates to: PQALRLGLDLAALVNGDRWRAWG*CAQNGG
Trigger: ACCTCCGTTCTGTGCACAGCAGCCCCACGCTCTCCA...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR CCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGTCCTTCTTCTCCCCGTaGATGTGCTCGTTGTTGATG +
Preference number: 2 (lower is better)
Translates to: PGGEAAWCSACVESARPMSFFSP*MCSLLM
Trigger: CATCAACAACGAGCACATCCACGGGGAGAAGAAGGA...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTTCTCTTGGTGCAGCCTaGGATCTTGCAGATGTAGGG +
Preference number: 2 (lower is better)
Translates to: QRGGRPQALRLGLDLAALSLGAA*DLADVG
Trigger: CCCTACATCTGCAAGATCCCAGGCTGCACCAAGAGA...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTTGGGCATCTGGGCCGTaGACCGTTTTCACATGCTTC +
Preference number: 2 (lower is better)
Translates to: AGGAVAALLQLAQHGHLAWASGP*TVFTCF
Trigger: GAAGCATGTGAAAACGGTCCACGGCCCAGATGCCCA...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCGGTGACGTGGGCATCTaGGCCGTGGACCGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGGDVGI*AVDRFH
Trigger: GTGAAAACGGTCCACGGCCCAGATGCCCACGTCACC...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp GTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGCCTGGCTGGTGCTGCTaGCCTCGGTGCTCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: VVWGCQRSQCFPWDTPARPGWCC*PRCSLG
Trigger: GCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGG...CCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTACTGGGCCCCGGGGCTaGACTGACACAGCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: REEAGTARSCKHQRLESTTGPRG*TDTARS
Trigger: GCTCCGGGCTGTGTCAGTCCAGCCCCGGGGCCCAGT...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTGCTCGAACCGGTGCATaGTGGTCATGTGTTTGCGCA +
Preference number: 2 (lower is better)
Translates to: AGGAVAALLQLAQHGHLAARTGA*WSCVCA
Trigger: TGCGCAAACACATGACCACCATGCACCGGTTCGAGC...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGAGCCGCCGCTGCACTaGCTGGCCTCGCTCGAGCGC +
Preference number: 2 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAEPPLH*LASLER
Trigger: GCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTACCCTGGGGATGCCCTaGGAGGGGGCTCCGCTGCGG +
Preference number: 2 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCTLGMP*EGAPLR
Trigger: CCGCAGCGGAGCCCCCTCCCAGGGCATCCCCAGGGT...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCGGCGATTGCCCATCGTaGTGGGGTCAGGTGCCACTT +
Preference number: 2 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCGDCPS*WGQVPL
Trigger: AAGTGGCACCTGACCCCACCACGATGGGCAATCGCC...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CAA 90 bp CAGAAGGAAGGGAATCCGGAGGATACCAGGCATGCACACTGTGGCTaGGTGGAGAACACTGGGCTGCTGGTGAGTGCTGGGGGACCGGGC +
Preference number: 2 (lower is better)
Translates to: QKEGNPEDTRHAHCG*VENTGLLVSAGGPG
Trigger: GCCCGGTCCCCCAGCACTCACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCCGGATTCCCTTCCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR TCA 90 bp CGGGCTGGAGAAACGGGACACGTCCACGGGGTTGAGGTAGTCGTGGAGATGGGGACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACG +
Preference number: 2 (lower is better)
Translates to: RAGETGHVHGVEVVVEMGTLLRL*MATGLT
Trigger: CGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGT...CCCCATCTCCACGACTACCTCAACCCCGTGGACGTGTCCCGTTTCTCCAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR TCA 90 bp CACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGTCCTCCACGCCTCAGGCTCGGTCTTaGCCTTGCTGCGCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: HSPELSVLMALTCRQSSTPQARS*PCCACE
Trigger: TTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGG...CGTGGAGGACTGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp GGCCGTAGTAGTAGAGCATGCTGTGGTCCGGGGCCCCACCTGCGTCCTGCGGAGAGTTGGTCTCATAGATaGCCACCTCAGCCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: GRSSRACCGPGPHLRPAESWSHR*PPQPPA
Trigger: AGCAGGAGGCTGAGGTGGTCATCTATGAGACCAACT...CTCCGCAGGACGCAGGTGGGGCCCCGGACCACAGCATGCTCTACTACTACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR TCA 90 bp TTGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGCATGGTGGTCGCCCCGGGGCTGGACTaGCACAGCCCGGAGCTCTCG +
Preference number: 2 (lower is better)
Translates to: LSDLSFSFLSCSNRCMVVAPGLD*HSPELS
Trigger: CGAGAGCTCCGGGCTGTGTCAGTCCAGCCCCGGGGC...GACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp GCTGGACTGACACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAAAGGGCACACCCACATaGGCCGTGTCCAGACACCTG +
Preference number: 2 (lower is better)
Translates to: AGLTQPGALGLDGSDVQAKGTPT*AVSRHL
Trigger: CAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTT...TGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTGTCAGTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR-3UTR GCA 90 bp GAGGCGGCTGGGGAGGCACCGACCCCATGTTGCCCATCGCTCCCTTGGGCACAGTGCAGCCTGGGATCTTaGAGATGTAGGGTTTCTCGT +
Preference number: 2 (lower is better)
Translates to: EAAGEAPTPCCPSLPWAQCSLGS*RCRVSR
Trigger: ACGAGAAACCCTACATCTGCAAGATCCCAGGCTGCA...CTGTGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCCTCCCCAGCCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCTGTGTATCTCTTGGTaGAGCCTGGGATCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSLCISW*SLGSCR
Trigger: TCTGCAAGATCCCAGGCTGCACCAAGAGATACACAG...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGCTGTGTATCTCTTGGTaGAGCCTGGGATCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRLCISW*SLGSCR
Trigger: TCTGCAAGATCCCAGGCTGCACCAAGAGATACACAG...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGCGGTGTGCGGAGGTaGACGTCATTGCGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLSGVRR*TSLRCF
Trigger: GAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCTTGATGGCTCTGACGTaGAGGCAGTCCTCCACGGCC +
Preference number: 2 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSLMALT*RQSSTA
Trigger: GGCCGTGGAGGACTGCCTGCACGTCAGAGCCATCAA...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTAGCTGCTCGAACCGGTaGATGGTGGTCATGTGTTTG +
Preference number: 2 (lower is better)
Translates to: QLAQHGHLARGQLRQPRVSCSNR*MVVMCL
Trigger: CAAACACATGACCACCATGCACCGGTTCGAGCAGCT...AACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CCCATCGGGCCTGTTTGGGGCTCCATGAAGCCAGGCTGGCGGGCAGGCAGAAGGTTCTCCTTCTTGAGCTaGTCGAACCGGTGCATGGTG +
Preference number: 2 (lower is better)
Translates to: PIGPVWGSMKPGWRAGRRFSFLS*SNRCMV
Trigger: CACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAA...CCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAAGGGGCCGCCAGTGGCTaGCGCGTACTTGGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: QSQTRLYGVEEPALPNLEGAASG*RVLGPQ
Trigger: CTGCGGGCCAAGTACGCGGCAGCCACTGGCGGCCCC...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CCCCAGATGCCCTGGCTTGGCTGGCATGTTGCTGCAGGATTGGGGGAACTGGTTGCACCACCGCCAGGTTaGCCTGAGGAAAGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: PQMPWLGWHVAAGLGELVAPPPG*PEERVE
Trigger: CTCCACCCTTTCCTCAGGGCAACCTGGCGGTGGTGC...AACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCCAGGGCATCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGCCAGACACCTGGCCCTaGGTCAGCGCCAGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLPDTWP*VSARGE
Trigger: CTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR-3UTR CCA 90 bp CTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGAAGGTGGGTGAGGGCTaGATCAGGGGTGGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: LADCSPGTGQRQASAAPPKVGEG*IRGGVC
Trigger: ACACACACCACCCCTGATCCAGCCCTCACCCACCTT...CGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCAGGGCCATGGGCTGCTaGGCCAGGAAGGTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFRAMGC*ARKVGE
Trigger: CTCACCCACCTTCCTGGCCCAGCAGCCCATGGCCCT...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GTAGGCCTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACTGCTGCTGCTGAGCTaGGTGGGCGTGGCATTGATG +
Preference number: 2 (lower is better)
Translates to: VGLADCSPGTGQRQASAALLLLS*VGVALM
Trigger: CATCAATGCCACGCCCACCCAGCTCAGCAGCAGCAG...TGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAGGCCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp GCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGTCTCTTGGTGCAGCCTaGGATCTTGCAGATGTAGGG +
Preference number: 2 (lower is better)
Translates to: AFRGIHLPGALVQSATGVSLGAA*DLADVG
Trigger: CCCTACATCTGCAAGATCCCAGGCTGCACCAAGAGA...CACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCGGCCTCGGTGCTCTCTaGGCCGCCAGGCTCCGTGCC +
Preference number: 2 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKAGLGAL*AARLRA
Trigger: GGCACGGAGCCTGGCGGCCCAGAGAGCACCGAGGCC...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp TCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGGAGGGGAGGCAGCTTaGTGTTCCGCGTGTGTGGAG +
Preference number: 2 (lower is better)
Translates to: SEKPVLSVGYTCPVPSSRGGEAA*CSACVE
Trigger: CTCCACACACGCGGAACACCAAGCTGCCTCCCCTCC...TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp TCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCTACCTGGCTCCGCCGCCTaGAGCCTCGTGGGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: STAQACYFCSGWRAPQSLPGSAA*SLVGEG
Trigger: GCCTTCCCCCACGAGGCTCCAGGCGGCGGAGCCAGG...TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAGGACTGCACCACGTCGTCTaGAAGCACCAGGTCGTCCTC +
Preference number: 2 (lower is better)
Translates to: LRVHSAPGARASRSSCSGLHHVV*KHQVVL
Trigger: GAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAG...TCCTGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp TCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCTAGCCACCATCCTGCGCTaGCCGTGCAGCCCCGGGCTG +
Preference number: 2 (lower is better)
Translates to: STAQACYFCSGWRAPQSLATILR*PCSPGL
Trigger: CAGCCCGGGGCTGCACGGCCAGCGCAGGATGGTGGC...TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp CTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGAACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACG +
Preference number: 2 (lower is better)
Translates to: LEPVHGGHVFAQLEATSGTLLRL*MATGLT
Trigger: CGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGT...TCCGCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCGCATGTACTGCGCCTTaGAGGGCTTCTGCTCCCGCG +
Preference number: 2 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFACTAP*RASAPA
Trigger: CGCGGGAGCAGAAGCCCTTCAAGGCGCAGTACATGC...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCAGGAATCCTTGAGTaGCTTGAGCTTCTCCTTCTT +
Preference number: 2 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRAGILE*LELLLL
Trigger: AAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGC...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAACCACCTCAGCCTCCTaGTTACAGTCATCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGTTSAS*LQSSLS
Trigger: GGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTTGCAGCCTGGGATCTTaGAGATGTAGGGTTTCTCGT +
Preference number: 2 (lower is better)
Translates to: QLAQHGHLARGQLRQPRVCSLGS*RCRVSR
Trigger: ACGAGAAACCCTACATCTGCAAGATCCCAGGCTGCA...AACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGATGCACGTCATTGCGCTaGTTCTTGGTGACGTGGGCA +
Preference number: 2 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGCTSLR*FLVTWA
Trigger: TGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCA...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCCCACGGCCTGGCTGGTaGTGCTGGCCTCGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAPRPGW*CWPRCS
Trigger: AGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGG...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGAAAGGTGGGTGAGGGCTaGATCAGGGGTGGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: DLAALVNGDRVDGAADGRKVGEG*IRGGVC
Trigger: ACACACACCACCCCTGATCCAGCCCTCACCCACCTT...TCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCGGAAGGTGGGTGAGGGCTaGATCAGGGGTGGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: VRLDVLHHVVWKHQVVLRKVGEG*IRGGVC
Trigger: ACACACACCACCCCTGATCCAGCCCTCACCCACCTT...CCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGTCCTTCTTCTCCCCGTaGATGTGCTCGTTGTTGATG +
Preference number: 2 (lower is better)
Translates to: AFRGIHLPGALVQSATGVSFFSP*MCSLLM
Trigger: CATCAACAACGAGCACATCCACGGGGAGAAGAAGGA...CACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCTCTCTTGGTGCAGCCTaGGATCTTGCAGATGTAGGG +
Preference number: 2 (lower is better)
Translates to: EASAFRGIHLPGALVQSASLGAA*DLADVG
Trigger: CCCTACATCTGCAAGATCCCAGGCTGCACCAAGAGA...GGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCAGGTTGGGCATCTGGGCCGTaGACCGTTTTCACATGCTTC +
Preference number: 2 (lower is better)
Translates to: DCSPGTGQRQASAAPPPGWASGP*TVFTCF
Trigger: GAAGCATGTGAAAACGGTCCACGGCCCAGATGCCCA...ACCTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCTGGGCATCTGGGCCGTaGACCGTTTTCACATGCTTC +
Preference number: 2 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCWASGP*TVFTCF
Trigger: GAAGCATGTGAAAACGGTCCACGGCCCAGATGCCCA...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GTGGACTTGGCCATAGCAGGCATGGGGGCTCATAGTGGTAGTCATGCCAGGACAGGTGGAGGCTTCACCTaGCTGGCCAGGGCGTCTACG +
Preference number: 2 (lower is better)
Translates to: VDLAIAGMGAHSGSHARTGGGFT*LARAST
Trigger: CGTAGACGCCCTGGCCAGCCAGGTGAAGCCTCCACC...TGTCCTGGCATGACTACCACTATGAGCCCCCATGCCTGCTATGGCCAAGTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CAA 90 bp GTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTaGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGC +
Preference number: 2 (lower is better)
Translates to: VFRVCGVGPAHEQES*SDLSFSFLSCSNRC
Trigger: GCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CAA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTaGAGGTCAGCCAGCTGCTCCTGGGAGAGGGGAAGGGCACACCCA +
Preference number: 2 (lower is better)
Translates to: TTSASCLQSSLSRSS*RSASCSWERGRAHP
Trigger: TGGGTGTGCCCTTCCCCTCTCCCAGGAGCAGCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR-3UTR TCA 90 bp TCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACG +
Preference number: 2 (lower is better)
Translates to: SEKPVLSVGYTCPVPSSRTLLRL*MATGLT
Trigger: CGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGT...TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp CACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGTCCTCCACGAGTTGGTCTCATAGATaGCCACCTCAGCCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: HSPELSVLMALTCRQSSTSWSHR*PPQPPA
Trigger: AGCAGGAGGCTGAGGTGGTCATCTATGAGACCAACT...CGTGGAGGACTGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp CGCTGGCCGTGCAGCCCCGGGCTGGGTAGTCTGGGGTTGTCAGAGAAGCCAGTGGCAGGAATCCTTGAGTaGCTTGAGCTTCTCCTTCTT +
Preference number: 2 (lower is better)
Translates to: RWPCSPGLGSLGLSEKPVAGILE*LELLLL
Trigger: AAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGC...CACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTACCGCCAGGTTGCCCTaGGGAAAGGGTGGAGGCTTC +
Preference number: 2 (lower is better)
Translates to: REEAGTARSCKHQRLESTTARLP*GKGGGF
Trigger: GAAGCCTCCACCCTTTCCTCAGGGCAACCTGGCGGT...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGTGGACCGTTTTCACATaGTTCCGGAGAGAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLWTVFT*FRRELG
Trigger: CCCCAGCTCTCTCCGGAAGCATGTGAAAACGGTCCA...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp TTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCAGCTGCTCGAACCGGTaGATGGTGGTCATGTGTTTG +
Preference number: 2 (lower is better)
Translates to: LRTVARVLAKGRLLLHHRSCSNR*MVVMCL
Trigger: CAAACACATGACCACCATGCACCGGTTCGAGCAGCT...GCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGATTCTCCTTCTTGAGCTaGTCGAACCGGTGCATGGTG +
Preference number: 2 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGFSFLS*SNRCMV
Trigger: CACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAA...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAGGATCATGTTCAGGAACTTaGTCTCCTCGGCGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: LRVHSAPGARASRSSCSGSCSGT*SPRRGW
Trigger: CCAGCCTCGCCGAGGAGAGCAAGTTCCTGAACATGA...TCCTGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GGAGGCTGGGGCTCAGAGCACCCGAGAACAAACTCGAGTGATCGCCATCATCCAGGCGATTGCCCATCGTaGTGGGGTCAGGTGCCACTT +
Preference number: 2 (lower is better)
Translates to: GGWGSEHPRTNSSDRHHPGDCPS*WGQVPL
Trigger: AAGTGGCACCTGACCCCACCACGATGGGCAATCGCC...TGGATGATGGCGATCACTCGAGTTTGTTCTCGGGTGCTCTGAGCCCCAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGGGCAGGCAGAAGGCTaGGGACCTGGTGGTAGCCCT +
Preference number: 2 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAGQAEG*GPGGSP
Trigger: AGGGCTACCACCAGGTCCCCAGCCTTCTGCCTGCCC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CAA 90 bp TCTTTGAGCAGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTaGGTGACGTGGGCATCTGGGCCGTGGACCGTTTTCACATGCTTC +
Preference number: 2 (lower is better)
Translates to: SLSSGVRRCTSLRCF*VTWASGPWTVFTCF
Trigger: GAAGCATGTGAAAACGGTCCACGGCCCAGATGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CAA 90 bp CTGGTGAGTGCTGGGGGACCGGGCTGCCGTCAGGCCCTGGAGTTTTaGGTGGTAAAGTGGGTGGACGTTGCATTGGAGAAACAGGATTGG +
Preference number: 2 (lower is better)
Translates to: LVSAGGPGCRQALEF*VVKWVDVALEKQDW
Trigger: CCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCCGGTCCCCCAGCACTCACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR GCA 90 bp TCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCTAGTGAGGGCCATGGGCTaGTGGGCCAGGAAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: STAQACYFCSGWRAPQSLVRAMG*WARKVG
Trigger: ACCCACCTTCCTGGCCCAGCAGCCCATGGCCCTCAC...TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCGCCGACTCACTGCTCTaGTTGTTCTGGTTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: RAPLACALMYCTTSSGSTADSLL*LFWLVS
Trigger: TGACACCAACCAGAACAAGCAGAGCAGTGAGTCGGC...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GCTGGACTGACACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGCCGACTCACTGCTCTaGTTGTTCTGGTTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: AGLTQPGALGLDGSDVQAADSLL*LFWLVS
Trigger: TGACACCAACCAGAACAAGCAGAGCAGTGAGTCGGC...TGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTGTCAGTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp TCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCTATCAGCCAGCTGCTCCTaGGTCAGCGCCAGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: STAQACYFCSGWRAPQSLSASCS*VSARGE
Trigger: CTCCCCTCTGGCGCTGACGCAGGAGCAGCTGGCTGA...TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000452692.5
3UTR-3UTR GCA 90 bp GACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGATGTCGTACTCCTTGGTaGAGTCTTCCCAGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: DLAALVNGDRVDGAADGRCRTPW*SLPSGS
Trigger: ACTGCCACTGGGAAGACTGCACCAAGGAGTACGACA...TCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGATGCTGCTGGCCTCGGTaGTCTCTGGGCCGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRCCWPR*SLGRQA
Trigger: AGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCA...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGGGTGTGTCATCCAGTaGCGTCAGGTCTCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: REEAGTARSCKHQRLESTGCVIQ*RQVSQA
Trigger: AGCCTGGGAGACCTGACGGCACTGGATGACACACCC...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGCTGCTCGAACCGGTaGATGGTGGTCATGTGTTTG +
Preference number: 2 (lower is better)
Translates to: RAPLACALMYCTTSSGSTSCSNR*MVVMCL
Trigger: CAAACACATGACCACCATGCACCGGTTCGAGCAGCT...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp TCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCTACTGTCGCGGCGCTCCTaGAGCTGGCTCAGCATGGTC +
Preference number: 2 (lower is better)
Translates to: STAQACYFCSGWRAPQSLLSRRS*SWLSMV
Trigger: GACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAG...TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGTCCTCCACGCTGCTCTGCTTGTTCTaGTTGGTGTCACTCAGACAG +
Preference number: 2 (lower is better)
Translates to: HSPELSVLMALTCRQSSTLLCLF*LVSLRQ
Trigger: CTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAG...CGTGGAGGACTGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCTGCGATTCTGGTGCTTaGCGCGGTCCGAGGCGTTGG +
Preference number: 2 (lower is better)
Translates to: IHLDGLPVPDSALRSRRACDSGA*RGPRRW
Trigger: CCAACGCCTCGGACCGCGCCAAGCACCAGAATCGCA...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGTGTAGGGTTTCTCGTTaGAGTGGGTGCGATTCTGGT +
Preference number: 2 (lower is better)
Translates to: LADCSPGTGQRQASAAPPCRVSR*SGCDSG
Trigger: ACCAGAATCGCACCCACTCCAACGAGAAACCCTACA...CGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAAACGTTGTGGGTGCTGTaGAAGCGCTGCACCCGCGGC +
Preference number: 2 (lower is better)
Translates to: QSQTRLYGVEEPALPNLETLWVL*KRCTRG
Trigger: GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGT...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCGCCACCATCCTGCGCTaGCCGTGCAGCCCCGGGCTG +
Preference number: 2 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTATILR*PCSPGL
Trigger: CAGCCCGGGGCTGCACGGCCAGCGCAGGATGGTGGC...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACTGGCTGCAGAGATCATaGAGAGCGTGGGGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: GLDLAALVNGDRVDGAADWLQRS*RAWGCC
Trigger: ACAGCAGCCCCACGCTCTCCATGATCTCTGCAGCCA...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR CAA 90 bp ACGGTGCCGGAGCTCACCTCATTCCACTGCACAGGCATGTTATTTTaGTTCAGGCTGGAGGGCGCCCCAAAGCCTAACTGGCATCCTCCC +
Preference number: 2 (lower is better)
Translates to: TVPELTSFHCTGMLF*FRLEGAPKPNWHPP
Trigger: GGGAGGATGCCAGTTAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAGCTCCGGCACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGTGAGGGCCATGGGCTaGTGGGCCAGGAAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRVRAMG*WARKVG
Trigger: ACCCACCTTCCTGGCCCAGCAGCCCATGGCCCTCAC...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGATCCCGCGTGCAGGCCTaGCAGCGGCACACAAACTCC +
Preference number: 2 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRSRVQA*QRHTNS
Trigger: GGAGTTTGTGTGCCGCTGGCAGGCCTGCACGCGGGA...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTGGACCGTTTTCACATaGTTCCGGAGAGAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFWTVFT*FRRELG
Trigger: CCCCAGCTCTCTCCGGAAGCATGTGAAAACGGTCCA...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGGGTGTGTCATCCAGTaGCGTCAGGTCTCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAGCVIQ*RQVSQA
Trigger: AGCCTGGGAGACCTGACGGCACTGGATGACACACCC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGTGGTGGTCATGTGTTTaGGCAGCTGGAGGCCACCAG +
Preference number: 2 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLWWSCV*AAGGHQ
Trigger: CTGGTGGCCTCCAGCTGCGCAAACACATGACCACCA...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp TCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGATTCTCCTTCTTGAGCTaGTCGAACCGGTGCATGGTG +
Preference number: 2 (lower is better)
Translates to: SEKPVLSVGYTCPVPSSRFSFLS*SNRCMV
Trigger: CACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAA...TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGGCCCGCAGGCTGTACTaGTGCGCCGGCGTGAGGTTG +
Preference number: 2 (lower is better)
Translates to: DSALRSRRASSTKPGIRMARRLY*CAGVRL
Trigger: CAACCTCACGCCGGCGCAGCAGTACAGCCTGCGGGC...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCGCCCGCAGGCTGTACTaGTGCGCCGGCGTGAGGTTG +
Preference number: 2 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLARRLY*CAGVRL
Trigger: CAACCTCACGCCGGCGCAGCAGTACAGCCTGCGGGC...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CCCCAAGTTCCCTGTGGCGATTGCCCATCGTGGTGGGGTCAGGTGCCACTTCTGCTGCTCTGCTTGTTCTaGTTGGTGTCACTCAGACAG +
Preference number: 2 (lower is better)
Translates to: PQVPCGDCPSWWGQVPLLLLCLF*LVSLRQ
Trigger: CTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAG...CAGAAGTGGCACCTGACCCCACCACGATGGGCAATCGCCACAGGGAACTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCCTGCTCTGCTTGTTCTaGTTGGTGTCACTCAGACAG +
Preference number: 2 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSLLCLF*LVSLRQ
Trigger: CTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAG...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GCTGGACTGACACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCATGTAGGGTTTCTCGTTaGAGTGGGTGCGATTCTGGT +
Preference number: 2 (lower is better)
Translates to: AGLTQPGALGLDGSDVQACRVSR*SGCDSG
Trigger: ACCAGAATCGCACCCACTCCAACGAGAAACCCTACA...TGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTGTCAGTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCCCGTCGGTGCTCGGGTaGCTCTGCAGGCGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTPSVLG*LCRRRP
Trigger: AGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGG...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GTGGACTTGGCCATAGCAGGCATGGGGGCTCATAGTGGTAGTCATGCCAGGACAGCCCCAAAGCCTAACTaGCATCCTCCCAGCATAGGG +
Preference number: 2 (lower is better)
Translates to: VDLAIAGMGAHSGSHARTAPKPN*HPPSIG
Trigger: CCCTATGCTGGGAGGATGCCAGTTAGGCTTTGGGGC...TGTCCTGGCATGACTACCACTATGAGCCCCCATGCCTGCTATGGCCAAGTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGCCCCAAAGCCTAACTaGCATCCTCCCAGCATAGGG +
Preference number: 2 (lower is better)
Translates to: NVSREEAGTARSCKHQRLAPKPN*HPPSIG
Trigger: CCCTATGCTGGGAGGATGCCAGTTAGGCTTTGGGGC...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CAA 90 bp CCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTaGAGCTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGC +
Preference number: 2 (lower is better)
Translates to: PAHEQESLSDLSFSF*SCSNRCMVVMCLRS
Trigger: GCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp TTTGAGCAGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGCCGACTCACTGCTCTaGTTGTTCTGGTTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: FEQRCAEVHVIALLLGDVADSLL*LFWLVS
Trigger: TGACACCAACCAGAACAAGCAGAGCAGTGAGTCGGC...CACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CGGTGCCGGAGCTCACCTCATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCAGCGGTGTGCGGAGGTaGACGTCATTGCGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: RCRSSPHSTAQACYFCSGSGVRR*TSLRCF
Trigger: GAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT...GCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAGCTCCGGCACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATTGATGGCTCTGACGTaGAGGCAGTCCTCCACGGCC +
Preference number: 2 (lower is better)
Translates to: QSQTRLYGVEEPALPNLELMALT*RQSSTA
Trigger: GGCCGTGGAGGACTGCCTGCACGTCAGAGCCATCAA...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCAGCTGCTCGAACCGGTaGATGGTGGTCATGTGTTTG +
Preference number: 2 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFSCSNR*MVVMCL
Trigger: CAAACACATGACCACCATGCACCGGTTCGAGCAGCT...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp TGCTCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGTGGGCTGCTGGTGAGTaGTGGGGGACCGGGCTGCCG +
Preference number: 2 (lower is better)
Translates to: CSNAPNLLPRFSLTTVKGWAAGE*WGTGLP
Trigger: CGGCAGCCCGGTCCCCCAGCACTCACCAGCAGCCCA...CCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CCA 90 bp TCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCAGCAAGGTGGGTGAGGGCTaGATCAGGGGTGGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: SASCLQSSLSRSSLRSASKVGEG*IRGGVC
Trigger: ACACACACCACCCCTGATCCAGCCCTCACCCACCTT...GCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCGGTGACGTGGGCATCTaGGCCGTGGACCGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKAGDVGI*AVDRFH
Trigger: GTGAAAACGGTCCACGGCCCAGATGCCCACGTCACC...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGCGGCGCTCCTGCAGCTaGCTCAGCATGGTCACCTCG +
Preference number: 2 (lower is better)
Translates to: DSALRSRRASSTKPGIRMRRSCS*LSMVTS
Trigger: CGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCG...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGCCCCAAAGCCTAACTaGCATCCTCCCAGCATAGGG +
Preference number: 2 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAAPKPN*HPPSIG
Trigger: CCCTATGCTGGGAGGATGCCAGTTAGGCTTTGGGGC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCTATACAGGTTGGGACTaGCAAGGGAAATCCTATCTC +
Preference number: 2 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCYTGWD*QGKSYL
Trigger: GAGATAGGATTTCCCTTGCCAGTCCCAACCTGTATA...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR TCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTAGTTGGTCTCATAGATaGCCACCTCAGCCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: REEAGTARSCKHQRLESTSWSHR*PPQPPA
Trigger: AGCAGGAGGCTGAGGTGGTCATCTATGAGACCAACT...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTATCTCAGGAAGGCGATaGACACCACCACAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCISGRR*TPPQSH
Trigger: GTGGCTCTGTGGTGGTGTTCATCGCCTTCCTGAGAT...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR GCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCTCAGCCAGCTGCTCCTaGGTCAGCGCCAGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTSASCS*VSARGE
Trigger: CTCCCCTCTGGCGCTGACGCAGGAGCAGCTGGCTGA...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000452692.5
3UTR-3UTR GCA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACCTGTGTATCTCTTGGTaGAGCCTGGGATCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: GLDLAALVNGDRVDGAADLCISW*SLGSCR
Trigger: TCTGCAAGATCCCAGGCTGCACCAAGAGATACACAG...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTTGCACGTCATTGCGCTaGTTCTTGGTGACGTGGGCA +
Preference number: 2 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCCTSLR*FLVTWA
Trigger: TGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCA...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp TTGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGCATGGTGGTCTGGTGGTCATGTGTTTaGGCAGCTGGAGGCCACCAG +
Preference number: 2 (lower is better)
Translates to: LSDLSFSFLSCSNRCMVVWWSCV*AAGGHQ
Trigger: CTGGTGGCCTCCAGCTGCGCAAACACATGACCACCA...GACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTTTCTCCTTCTTGAGCTaGTCGAACCGGTGCATGGTG +
Preference number: 2 (lower is better)
Translates to: REEAGTARSCKHQRLESTFSFLS*SNRCMV
Trigger: CACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAA...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGGTTCACGTTGTGGGTaGTGTGGAAGCGCTGCACCC +
Preference number: 2 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRGSRCG*CGSAAP
Trigger: GGGTGCAGCGCTTCCACAGCACCCACAACGTGAACC...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTGTGCTCGGGTGGCTCTaGAGGCGGAGGCCTCGCCTG +
Preference number: 2 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSVLGWL*RRRPRL
Trigger: CAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCAC...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCTGCGATTCTGGTGCTTaGCGCGGTCCGAGGCGTTGG +
Preference number: 2 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLCDSGA*RGPRRW
Trigger: CCAACGCCTCGGACCGCGCCAAGCACCAGAATCGCA...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGACCGGGCTGGGTAGTCTaGGGTTGTCAGAGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRPGWVV*GCQRSQ
Trigger: CTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGG...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCATGCCCTGGCTTGGCTaGCATGTTGCTGCAGGATTG +
Preference number: 2 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAMPWLG*HVAAGL
Trigger: CAATCCTGCAGCAACATGCCAGCCAAGCCAGGGCAT...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAACACACTGTGGCTTGGTaGAGAACACTGGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: QSQTRLYGVEEPALPNLEHTVAW*RTLGCW
Trigger: CCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTG...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CAA 90 bp AGCCATGTTGCTGATGCCTCATTCCACTGCACAGGCATGTTATTTTaGTTCAGGCTGGAGGGCGCCCCAAAGCCTAACTGGCATCCTCCC +
Preference number: 2 (lower is better)
Translates to: SHVADASFHCTGMLF*FRLEGAPKPNWHPP
Trigger: GGGAGGATGCCAGTTAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGCATCAGCAACATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCGCATGTACTGCGCCTTaGAGGGCTTCTGCTCCCGCG +
Preference number: 2 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTACTAP*RASAPA
Trigger: CGCGGGAGCAGAAGCCCTTCAAGGCGCAGTACATGC...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR TCA 90 bp CTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGATGACGATGCCACACATTCCCCATaGAAAGGTTTGGGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: LVSGQSLMCWDAASPDDDATHSP*KGLGCV
Trigger: CACACACCCCAAACCTTTTCATGGGGAATGTGTGGC...ATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR GCA 90 bp TCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCAGCGCCGACTCACTGCTCTaGTTGTTCTGGTTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: SASCLQSSLSRSSLRSASADSLL*LFWLVS
Trigger: TGACACCAACCAGAACAAGCAGAGCAGTGAGTCGGC...GCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGTGCAGCCTGGGATCTTaGAGATGTAGGGTTTCTCGT +
Preference number: 2 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLCSLGS*RCRVSR
Trigger: ACGAGAAACCCTACATCTGCAAGATCCCAGGCTGCA...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGAGCGGTGTGCGGAGGTaGACGTCATTGCGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: DSALRSRRASSTKPGIRMSGVRR*TSLRCF
Trigger: GAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGGGTTCACGTTGTGGGTaGTGTGGAAGCGCTGCACCC +
Preference number: 2 (lower is better)
Translates to: DSALRSRRASSTKPGIRMGSRCG*CGSAAP
Trigger: GGGTGCAGCGCTTCCACAGCACCCACAACGTGAACC...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGCTGCTGCTGCTGAGCTaGGTGGGCGTGGCATTGATG +
Preference number: 2 (lower is better)
Translates to: DSALRSRRASSTKPGIRMLLLLS*VGVALM
Trigger: CATCAATGCCACGCCCACCCAGCTCAGCAGCAGCAG...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGTCCTTCTTCTCCCCGTaGATGTGCTCGTTGTTGATG +
Preference number: 2 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLSFFSP*MCSLLM
Trigger: CATCAACAACGAGCACATCCACGGGGAGAAGAAGGA...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCCCGGGCTGGGTAGTCTaGGGTTGTCAGAGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLPGWVV*GCQRSQ
Trigger: CTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGG...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CGGTGCCGGAGCTCACCTCATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGTCGTACTCCTTGGTaGAGTCTTCCCAGTGGCAGT +
Preference number: 2 (lower is better)
Translates to: RCRSSPHSTAQACYFCSGCRTPW*SLPSGS
Trigger: ACTGCCACTGGGAAGACTGCACCAAGGAGTACGACA...GCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAGCTCCGGCACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGAGGAAAATTCAACGATaGTCCCTCAGAGTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: NVSREEAGTARSCKHQRLRKIQR*SLRVLR
Trigger: CCTCAGGACTCTGAGGGAGCATCGTTGAATTTTCCT...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTTGTAGGGTTTCTCGTTaGAGTGGGTGCGATTCTGGT +
Preference number: 2 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCCRVSR*SGCDSG
Trigger: ACCAGAATCGCACCCACTCCAACGAGAAACCCTACA...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGCTTGGTGGAGAACACTaGGCTGCTGGTGAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: DSALRSRRASSTKPGIRMLGGEH*AAGECW
Trigger: CCAGCACTCACCAGCAGCCCAGTGTTCTCCACCAAG...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR TCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGAGGAATGATGTCTCCTaGAGCCAGTTCCAAATTCCA +
Preference number: 2 (lower is better)
Translates to: NVSREEAGTARSCKHQRLRNDVS*SQFQIP
Trigger: TGGAATTTGGAACTGGCTTCAGGAGACATCATTCCT...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR GCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCGCAGGCTGTACTGCTaGGCCGGCGTGAGGTTGAGC +
Preference number: 2 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMRRLYC*AGVRLS
Trigger: GCTCAACCTCACGCCGGCGCAGCAGTACAGCCTGCG...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCTGCGCCTTGATGTACTaGACCACGTCGTCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLCALMY*TTSSGS
Trigger: GCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCA...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTAGGACACTGGCTGCCTaGCACTGGCTGTCGCAGCTG +
Preference number: 2 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSRTLAA*HWLSQL
Trigger: CAGCTGCGACAGCCAGTGGCAGGCAGCCAGTGTCCT...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCGCTCGAACCGGTGCATaGTGGTCATGTGTTTGCGCA +
Preference number: 2 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLARTGA*WSCVCA
Trigger: TGCGCAAACACATGACCACCATGCACCGGTTCGAGC...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCACCACCTCAGCCTCCTaGTTACAGTCATCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTTTSAS*LQSSLS
Trigger: GGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTTTGATGGCTCTGACGTaGAGGCAGTCCTCCACGGCC +
Preference number: 2 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSLMALT*RQSSTA
Trigger: GGCCGTGGAGGACTGCCTGCACGTCAGAGCCATCAA...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGGCACCACCGCCAGGTTaGCCTGAGGAAAGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMAPPPG*PEERVE
Trigger: CTCCACCCTTTCCTCAGGGCAACCTGGCGGTGGTGC...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGAGGACACTGGCTGCCTaGCACTGGCTGTCGCAGCTG +
Preference number: 2 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMRTLAA*HWLSQL
Trigger: CAGCTGCGACAGCCAGTGGCAGGCAGCCAGTGTCCT...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR GCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGATGCCTCATTCCACTaGACAGGCATGTTATTTTTG +
Preference number: 2 (lower is better)
Translates to: NVSREEAGTARSCKHQRLDASFH*TGMLFL
Trigger: CAAAAATAACATGCCTGTGCAGTGGAATGAGGCATC...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTCTGCTGCTGCTGAGCTaGGTGGGCGTGGCATTGATG +
Preference number: 2 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSLLLLS*VGVALM
Trigger: CATCAATGCCACGCCCACCCAGCTCAGCAGCAGCAG...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTGGTGACGTGGGCATCTaGGCCGTGGACCGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSGDVGI*AVDRFH
Trigger: GTGAAAACGGTCCACGGCCCAGATGCCCACGTCACC...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp TTCATTTGCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCCTGAGTGGTGCTGTTTaGCAAGGTTGCCACACATTC +
Preference number: 2 (lower is better)
Translates to: FICSWPCLWTEFDVLGRSLSGAV*QGCHTF
Trigger: GAATGTGTGGCAACCTTGCCAAACAGCACCACTCAG...GCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGCAAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CAA 90 bp CGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATaGGAGAAACAGGATTGGGTAAACACGCAACTTCCTCTTCCTACT +
Preference number: 2 (lower is better)
Translates to: RQALEFLVVKWVDVA*EKQDWVNTQLPLPT
Trigger: AGTAGGAAGAGGAAGTTGCGTGTTTACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR TCA 90 bp TGTCCTCAAACTCTCCTAAGAAGTTCCTCATTAAGGCCAAGGTCACAGTCAGAGACTTCCTCTTCCTACTaGGAGATCCCTAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: CPQTLLRSSSLRPRSQSETSSSY*EIPRAA
Trigger: GGCTGCCCTAGGGATCTCTCAGTAGGAAGAGGAAGT...CTCTGACTGTGACCTTGGCCTTAATGAGGAACTTCTTAGGAGAGTTTGAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR GCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGTCAGAGAAGCCAGTaGTTTCCGTGGGATACACCT +
Preference number: 2 (lower is better)
Translates to: DSALRSRRASSTKPGIRMCQRSQ*FPWDTP
Trigger: AGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACA...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTCCTTCTTCTCCCCGTaGATGTGCTCGTTGTTGATG +
Preference number: 2 (lower is better)
Translates to: DSALRSRRASSTKPGIRMSFFSP*MCSLLM
Trigger: CATCAACAACGAGCACATCCACGGGGAGAAGAAGGA...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCTGTAGGGTTTCTCGTTaGAGTGGGTGCGATTCTGGT +
Preference number: 2 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLCRVSR*SGCDSG
Trigger: ACCAGAATCGCACCCACTCCAACGAGAAACCCTACA...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CCA 90 bp TGTCCTCAAACTCTCCTAAGAAGTTCCTCATTAAGGCCAAGGTCACAGTCAGAGCAGGCATGCACACTGTaGCTTGGTGGAGAACACTGG +
Preference number: 2 (lower is better)
Translates to: CPQTLLRSSSLRPRSQSEQACTL*LGGEHW
Trigger: CCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTG...CTCTGACTGTGACCTTGGCCTTAATGAGGAACTTCTTAGGAGAGTTTGAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR GCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGTGGACCGTTTTCACATaGTTCCGGAGAGAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMWTVFT*FRRELG
Trigger: CCCCAGCTCTCTCCGGAAGCATGTGAAAACGGTCCA...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR GCA 90 bp TTCATTTGCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGGGCTACATTCTACATaGAAACACTGTAAACACGGT +
Preference number: 2 (lower is better)
Translates to: FICSWPCLWTEFDVLGRSGLHST*KHCKHG
Trigger: ACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCCC...GCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGCAAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR GCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGGGAGGATACCAGGCATaGACACTGTGGCTTGGTGGA +
Preference number: 2 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMGGYQA*TLWLGG
Trigger: TCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCC...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGACTGTAAACACGGTCTaGAGAGGCCAGGGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMTVNTV*RGQGSF
Trigger: GAAGCTGCCCTGGCCTCTCCAGACCGTGTTTACAGT...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CCA 90 bp TGCTCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGGAGTCACACTCTGAGTaGTGCTGTTTGGCAAGGTTG +
Preference number: 2 (lower is better)
Translates to: CSNAPNLLPRFSLTTVKGESHSE*CCLARL
Trigger: CAACCTTGCCAAACAGCACCACTCAGAGTGTGACTC...CCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR TCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCGGGTCTTGGTCACACTaGACAGGAAAATTCAACGAT +
Preference number: 2 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTGSWSH*TGKFND
Trigger: ATCGTTGAATTTTCCTGTTCAGTGTGACCAAGACCC...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR GCA 90 bp GTTCCAAATTCCATTTCCAGGTGGGTCTTGGTCACACTGAACAGGAAAATTCAACATGTCATCATTCTCTaGCCAGTGACTCAGCGGGCA +
Preference number: 2 (lower is better)
Translates to: VPNSISRWVLVTLNRKIQHVIIL*PVTQRA
Trigger: TGCCCGCTGAGTCACTGGGCAGAGAATGATGACATG...TTGAATTTTCCTGTTCAGTGTGACCAAGACCCACCTGGAAATGGAATTTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR GCA 90 bp GTTCCAAATTCCATTTCCAGGTGGGTCTTGGTCACACTGAACAGGAAAATTCAAGGCAGCTTCTGGGCTTaGCCCAAGGAGTACATTTTT +
Preference number: 2 (lower is better)
Translates to: VPNSISRWVLVTLNRKIQGSFWA*PKEYIF
Trigger: AAAAATGTACTCCTTGGGGCAAGCCCAGAAGCTGCC...TTGAATTTTCCTGTTCAGTGTGACCAAGACCCACCTGGAAATGGAATTTGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR GCA 90 bp TCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGGAAGTATGGTGGGGAAGATaGACCAATTCACCCTACAGT +
Preference number: 2 (lower is better)
Translates to: SNAPNLLPRFSLTTVKGEVWWGR*TNSPYS
Trigger: ACTGTAGGGTGAATTGGTGCATCTTCCCCACCATAC...TTCCCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CAA 90 bp CCTACAGTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTaGGGACTGGCAAGGGAAATCCTATCTCAGGAAGGCGATGAACAC +
Preference number: 2 (lower is better)
Translates to: PTVYSGMSSVQNIYR*GLAREILSQEGDEH
Trigger: GTGTTCATCGCCTTCCTGAGATAGGATTTCCCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATACTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGAGTTGGCCTTGTCTCTaGACAGAGTTTGATGTGCTG +
Preference number: 2 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMSWPCL*TEFDVL
Trigger: CAGCACATCAAACTCTGTCCAGAGACAAGGCCAACT...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR GCA 90 bp GTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTGGCAAGGAAAGTGGGTGGACGTTaGATTGGAGAAACAGGATTG +
Preference number: 2 (lower is better)
Translates to: VYSGMSSVQNIYRLGLARKVGGR*IGETGL
Trigger: CAATCCTGTTTCTCCAATGCAACGTCCACCCACTTT...CCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CCA 90 bp GTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTGGCAAGGTTGGAGAAACAGGATTaGGTAAACACGCAACTTCCT +
Preference number: 2 (lower is better)
Translates to: VYSGMSSVQNIYRLGLARLEKQD*VNTQLP
Trigger: AGGAAGTTGCGTGTTTACCCAATCCTGTTTCTCCAA...CCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 72 bp GCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTaGCCCGCCTGGCTCCGCCGCCTGGAGCCTCGTGGG +
Preference number: 3 (lower is better)
Translates to: AGTGHRAAAQGR*PAWLRRLEPRG
Trigger: CCCACGAGGCTCCAGGCGGCGGAGCCAGGCGGGCCAGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp GGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTaGACCCGCGGCAGGGACAGGGCATCGGGCCGCCGC +
Preference number: 3 (lower is better)
Translates to: GPGFTLWVLWKR*TRGRDRASGRR
Trigger: GCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp CACAGGGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTaGTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGG +
Preference number: 3 (lower is better)
Translates to: HRAAAGRGSRCG*CGSAAPAAGTG
Trigger: CCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCCCTGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 72 bp CGTGCAGGCAGTCCTCCACGGCCTGGCTGGTGCTGCTaGCCTCGGTGCTCTCTGGGCCGCCAGGCTCCGTGC +
Preference number: 3 (lower is better)
Translates to: RAGSPPRPGWCC*PRCSLGRQAPC
Trigger: GCACGGAGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGGAGGACTGCCTGCACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 72 bp GGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTaGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCG +
Preference number: 3 (lower is better)
Translates to: GGSGPGFTLWVL*KRCTRGRDRAS
Trigger: CGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 72 bp TCGGCACAGGGCGGCAGCGGGCCGGGGTTCACGTTGTaGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: SAQGGSGPGFTL*VLWKRCTRGRD
Trigger: GTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCCCTGTGCCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CCGCGTGGCCGTGGCCATAGGTCGGCCCGTCGCTGCCACGCCGCGGCCCCAGTGTGGGTGGGCGTGGCATaGATGGAGGTGAGGGCCATG +
Preference number: 3 (lower is better)
Translates to: PRGRGHRSARRCHAAAPVWVGVA*MEVRAM
Trigger: CATGGCCCTCACCTCCATCAATGCCACGCCCACCCA...CACTGGGGCCGCGGCGTGGCAGCGACGGGCCGACCTATGGCCACGGCCACGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCGGGCCGGGGTTCACGTaGTGGGTGCTGTGGAAGCGC +
Preference number: 3 (lower is better)
Translates to: GSGPGFTLWVLWKRCTRGGPGFT*WVLWKR
Trigger: GCGCTTCCACAGCACCCACAACGTGAACCCCGGCCC...GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 72 bp GGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTaGCCGTGCAGCCCCGGGCTGGGTAGTCTGGGGTTG +
Preference number: 3 (lower is better)
Translates to: GPTLESAATILR*PCSPGLGSLGL
Trigger: CAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CCAGACACCTGGCCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCATGGGTGGGCGTGGCATaGATGGAGGTGAGGGCCATG +
Preference number: 3 (lower is better)
Translates to: PDTWPCVSARGEAGRRPSWVGVA*MEVRAM
Trigger: CATGGCCCTCACCTCCATCAATGCCACGCCCACCCA...TGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR-3UTR CAA 90 bp GTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCTGCGCCGGCGTGAGGTaGAGCAGCCCGGAGCCGCCG +
Preference number: 3 (lower is better)
Translates to: VHVVGAVEALHPRQGQGICAGVR*SSPEPP
Trigger: CGGCGGCTCCGGGCTGCTCAACCTCACGCCGGCGCA...GATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GGGATGCCCTGGGAGGGGGCTCCGCTGCGGGGCTGCAGGTGTGGCTGCGTGCTGCCACTGGCGTGCGCCTaGATGTACTGCACCACGTCG +
Preference number: 3 (lower is better)
Translates to: GMPWEGAPLRGCRCGCVLPLACA*MYCTTS
Trigger: CGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGG...CAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCCAGGGCATCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 72 bp TGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATaGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCG +
Preference number: 3 (lower is better)
Translates to: WSCRGAPAAGSA*SPRSRTAPTAA
Trigger: CGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GCTCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: APASAPEGRPAAGPQARSVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...AGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000452692.5
3UTR-3UTR CAA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGTGCGATTCTGGTGCTaGGCGCGGTCCGAGGCGTTG +
Preference number: 3 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRVRFWC*ARSEAL
Trigger: CAACGCCTCGGACCGCGCCAAGCACCAGAATCGCAC...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GTTGAGCAGCCCGGAGCCGCCGCTGCACTGGCTGGCCTCGCTCGAGCGCCGCGAATGGTGGTCATGTGTTaGCGCAGCTGGAGGCCACCA +
Preference number: 3 (lower is better)
Translates to: VEQPGAAAALAGLARAPRMVVMC*RSWRPP
Trigger: TGGTGGCCTCCAGCTGCGCAAACACATGACCACCAT...TCGCGGCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTCCGGGCTGCTCAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp GAGCTGACCGTGCTGGTGGAGCTGTCGCGGCGCTCCTaGAGCTGGCTCAGCATGGTCACCTCGCTCGCGGAC +
Preference number: 3 (lower is better)
Translates to: ELTVLVELSRRS*SWLSMVTSLAD
Trigger: GTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGGTCAGCTC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 72 bp CCAGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTaGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATG +
Preference number: 3 (lower is better)
Translates to: PGWSHFPGGEAA*CSACVESARPM
Trigger: CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 72 bp ACCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTaGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCC +
Preference number: 3 (lower is better)
Translates to: TVLVELSRRSCS*LSMVTSLADSS
Trigger: GGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGGT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCGCGGTCCGAGGCGTaGGAGAAGGCTTTGTTGCAG +
Preference number: 3 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRARSEA*EKALLQ
Trigger: CTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCGC...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CAGGGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGGAGGTGCACGTCATaGCGCTGCTTCTTGGTGACG +
Preference number: 3 (lower is better)
Translates to: QGGSGPGFTLWVLWKRCTRRCTS*RCFLVT
Trigger: CGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCG...GGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTGGGAGGGGAGGCAGCTaGGTGTTCCGCGTGTGTGGA +
Preference number: 3 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPGRGGS*VFRVCG
Trigger: TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCC...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTGGGAGGGGAGGCAGCTaGGTGTTCCGCGTGTGTGGA +
Preference number: 3 (lower is better)
Translates to: QLAQHGHLARGQLRQPRVGRGGS*VFRVCG
Trigger: TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCC...AACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp ACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCGTaGAGCCCCGGGCTGGGTAGTCTGGGGTTGTCAGAG +
Preference number: 3 (lower is better)
Translates to: TLESAATILRWP*SPGLGSLGLSE
Trigger: CTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp CCTGCGGAGGCGGCTGGGGAGGCACCGACCCCATGTTaGCCATCGCTCCCTTGGGCACAGCCTCTGCTGTTT +
Preference number: 3 (lower is better)
Translates to: PAEAAGEAPTPC*PSLPWAQPLLF
Trigger: AAACAGCAGAGGCTGTGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCCTCCCCAGCCGCCTCCGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 72 bp CCTGACTGGACGGCATGGCAGCCATGGCATGGCCTGTaGCCCTGGCGTAGGCCAGCTGCTGCTGCACAGCAC +
Preference number: 3 (lower is better)
Translates to: PDWTAWQPWHGL*PWRRPAAAAQH
Trigger: GTGCTGTGCAGCAGCAGCTGGCCTACGCCAGGGCCACAGGCCATGCCATGGCTGCCATGCCGTCCAGTCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CAA 90 bp GTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGGGTGGGCGTGGCATaGATGGAGGTGAGGGCCATG +
Preference number: 3 (lower is better)
Translates to: VLSVGYTCPVPSSRAPLAWVGVA*MEVRAM
Trigger: CATGGCCCTCACCTCCATCAATGCCACGCCCACCCA...CGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 3 (lower is better)
Translates to: EALHPRQGQGIGPPHRVADSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTGCGCGGTCCGAGGCGTaGGAGAAGGCTTTGTTGCAG +
Preference number: 3 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPARSEA*EKALLQ
Trigger: CTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCGC...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCACGCCACTGTCATTGTaGGGGGCACTGCCCAGAGGA +
Preference number: 3 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSTPLSL*GALPRG
Trigger: TCCTCTGGGCAGTGCCCCCAACAATGACAGTGGCGT...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGGTGGCTGCCGCGTACTaGGCCCGCAGGCTGTACTGC +
Preference number: 3 (lower is better)
Translates to: LADCSPGTGQRQASAAPPVAAAY*ARRLYC
Trigger: GCAGTACAGCCTGCGGGCCAAGTACGCGGCAGCCAC...CGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR TCA 72 bp ACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATaGCCCCTCCGGGTGCACTCAGCACCAGGCGCTCGG +
Preference number: 3 (lower is better)
Translates to: TRQLESPGSGQR*PLRVHSAPGAR
Trigger: CCGAGCGCCTGGTGCTGAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp CACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTaGAGGCAGTCCTCCACGGCCTGGCTGGTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: HSPELSVLMALT*RQSSTAWLVLL
Trigger: CAGCAGCACCAGCCAGGCCGTGGAGGACTGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp ACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTaGGCCTTGATGTACTGCACCACGTCGTCTGGAAGC +
Preference number: 3 (lower is better)
Translates to: TCPVPSSRAPLA*ALMYCTTSSGS
Trigger: GCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp AATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTaGACTCAGCACCAGGCGCTCGGGCCTCTAGGTCAT +
Preference number: 3 (lower is better)
Translates to: NPQALGSDDPSG*TQHQALGPLGH
Trigger: ATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GGCTCAGGCGGGGCGTCACCCGCGGGCTGGAGAAACGGGACACGTCCACGGGGTGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 3 (lower is better)
Translates to: GSGGASPAGWRNGTRPRGDSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...ACCCCGTGGACGTGTCCCGTTTCTCCAGCCCGCGGGTGACGCCCCGCCTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR CAA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGGAGGTGCACGTCATaGCGCTGCTTCTTGGTGACG +
Preference number: 3 (lower is better)
Translates to: AGGAVAALLQLAQHGHLARRCTS*RCFLVT
Trigger: CGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCG...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCTGTCCCCATTCTCTTaGAGCAGCGGTGTGCGGAGG +
Preference number: 3 (lower is better)
Translates to: AGGAVAALLQLAQHGHLALSPFS*SSGVRR
Trigger: CCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAG...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCCCGGAGCTCTCGGTCTaGATGGCTCTGACGTGCAGG +
Preference number: 3 (lower is better)
Translates to: VHVVGAVEALHPRQGQGIPELSV*MALTCR
Trigger: CCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGG...GATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCACGCCACTGTCATTGTaGGGGGCACTGCCCAGAGGA +
Preference number: 3 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSTPLSL*GALPRG
Trigger: TCCTCTGGGCAGTGCCCCCAACAATGACAGTGGCGT...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR TCA 72 bp CGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTaGTGTACTGCACCACGTCGTCTGGAAGCACCAGGT +
Preference number: 3 (lower is better)
Translates to: RCPRPERHWRAP*CTAPRRLEAPG
Trigger: ACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 72 bp CAGCCACCATCCTGCGCTGGCCGTGCAGCCCCGGGCTaGGTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTT +
Preference number: 3 (lower is better)
Translates to: QPPSCAGRAAPG*VVWGCQRSQCF
Trigger: AAAGCACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCGCAGGATGGTGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 72 bp GGTTGCCCTGAGGAAAGGGTGGAGGCTTCACCTGGCTaGCCAGGGCGTCTACGGTGCCGGAGCTCACCTCAT +
Preference number: 3 (lower is better)
Translates to: GCPEERVEASPG*PGRLRCRSSPH
Trigger: ATGAGGTGAGCTCCGGCACCGTAGACGCCCTGGCCAGCCAGGTGAAGCCTCCACCCTTTCCTCAGGGCAACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 72 bp CCTCTGCTGTTTCCTGACTGGACGGCATGGCAGCCATaGCATGGCCTGTGGCCCTGGCGTAGGCCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: PLLFPDWTAWQP*HGLWPWRRPAA
Trigger: AGCAGCTGGCCTACGCCAGGGCCACAGGCCATGCCATGGCTGCCATGCCGTCCAGTCAGGAAACAGCAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 72 bp TGGGCACAGCCTCTGCTGTTTCCTGACTGGACGGCATaGCAGCCATGGCATGGCCTGTGGCCCTGGCGTAGG +
Preference number: 3 (lower is better)
Translates to: WAQPLLFPDWTA*QPWHGLWPWRR
Trigger: CCTACGCCAGGGCCACAGGCCATGCCATGGCTGCCATGCCGTCCAGTCAGGAAACAGCAGAGGCTGTGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CAA 90 bp TCTCCAGGCGGGAGTAGGCCTTCGAGCAGCCCTCGAACGTGCACTTGTGGGGCTTGGGTGGGCGTGGCATaGATGGAGGTGAGGGCCATG +
Preference number: 3 (lower is better)
Translates to: SPGGSRPSSSPRTCTCGAWVGVA*MEVRAM
Trigger: CATGGCCCTCACCTCCATCAATGCCACGCCCACCCA...AGCCCCACAAGTGCACGTTCGAGGGCTGCTCGAAGGCCTACTCCCGCCTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GCTGGACTGACACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGTGCGATTCTGGTGCTaGGCGCGGTCCGAGGCGTTG +
Preference number: 3 (lower is better)
Translates to: AGLTQPGALGLDGSDVQAVRFWC*ARSEAL
Trigger: CAACGCCTCGGACCGCGCCAAGCACCAGAATCGCAC...TGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTGTCAGTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGAGTGCGATTCTGGTGCTaGGCGCGGTCCGAGGCGTTG +
Preference number: 3 (lower is better)
Translates to: LEPVHGGHVFAQLEATSGVRFWC*ARSEAL
Trigger: CAACGCCTCGGACCGCGCCAAGCACCAGAATCGCAC...TCCGCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAGGAGTGCGATTCTGGTGCTaGGCGCGGTCCGAGGCGTTG +
Preference number: 3 (lower is better)
Translates to: LRVHSAPGARASRSSCSGVRFWC*ARSEAL
Trigger: CAACGCCTCGGACCGCGCCAAGCACCAGAATCGCAC...TCCTGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTATGGTGGTCATGTGTTaGCGCAGCTGGAGGCCACCA +
Preference number: 3 (lower is better)
Translates to: QLAQHGHLARGQLRQPRVMVVMC*RSWRPP
Trigger: TGGTGGCCTCCAGCTGCGCAAACACATGACCACCAT...AACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGATGGTGGTCATGTGTTaGCGCAGCTGGAGGCCACCA +
Preference number: 3 (lower is better)
Translates to: VLSVGYTCPVPSSRAPLAMVVMC*RSWRPP
Trigger: TGGTGGCCTCCAGCTGCGCAAACACATGACCACCAT...CGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCTTGAGCTTCTCCTTCTaGAGCTGCTCGAACCGGTGC +
Preference number: 3 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGLSFSF*SCSNRC
Trigger: GCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAA...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCCCACTGGCGTGCGCCTaGATGTACTGCACCACGTCG +
Preference number: 3 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCPLACA*MYCTTS
Trigger: CGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGG...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR TCA 72 bp AGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACGGTGCTGCTGACGGCC +
Preference number: 3 (lower is better)
Translates to: RPSGSVLTLLRL*MATGLTVLLTA
Trigger: GGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR TCA 72 bp CAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTaGGCAGCGGTGTGCGGAGGTGCACGTCATTGCGCT +
Preference number: 3 (lower is better)
Translates to: QAPCRPHCPHSL*AAVCGGARHCA
Trigger: AGCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp TCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTaGACCACGTCGTCTGGAAGCACCAGGTCGTCCTCC +
Preference number: 3 (lower is better)
Translates to: SSRAPLACALMY*TTSSGSTRSSS
Trigger: GGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp TTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTaGCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGC +
Preference number: 3 (lower is better)
Translates to: LSEKPVLSVGYT*PVPSSRAPLAC
Trigger: GCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp CCGGGCTGGGTAGTCTGGGGTTGTCAGAGAAGCCAGTaGTTTCCGTGGGATACACCTGCCCGGTGCCCTCGT +
Preference number: 3 (lower is better)
Translates to: PGWVVWGCQRSQ*FPWDTPARCPR
Trigger: ACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp GTGGAGGCTTCACCTGGCTGGCCAGGGCGTCTACGGTaGCGGAGCTCACCTCATTCCACTGCACAGGCATGT +
Preference number: 3 (lower is better)
Translates to: VEASPGWPGRLR*RSSPHSTAQAC
Trigger: ACATGCCTGTGCAGTGGAATGAGGTGAGCTCCGGCACCGTAGACGCCCTGGCCAGCCAGGTGAAGCCTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR GCA 72 bp TTCCCTGTGGCGATTGCCCATCGTGGTGGGGTCAGGTaGCACTTCTGTCTGCTGAGGGTGCCCCAGATGCCC +
Preference number: 3 (lower is better)
Translates to: FPVAIAHRGGVR*HFCLLRVPQMP
Trigger: GGGCATCTGGGGCACCCTCAGCAGACAGAAGTGGCACCTGACCCCACCACGATGGGCAATCGCCACAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR GCA 72 bp CCCCATGTTGCCCATCGCTCCCTTGGGCACAGCCTCTaGTGTTTCCTGACTGGACGGCATGGCAGCCATGGC +
Preference number: 3 (lower is better)
Translates to: PHVAHRSLGHSL*CFLTGRHGSHG
Trigger: GCCATGGCTGCCATGCCGTCCAGTCAGGAAACAGCAGAGGCTGTGCCCAAGGGAGCGATGGGCAACATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 72 bp TGGCTTGGTGGAGAACACTGGGCTGCTGGTGAGTGCTaGGGGACCGGGCTGCCGTCAGGCCCTGGAGTTTTT +
Preference number: 3 (lower is better)
Translates to: WLGGEHWAAGEC*GTGLPSGPGVF
Trigger: AAAAACTCCAGGGCCTGACGGCAGCCCGGTCCCCCAGCACTCACCAGCAGCCCAGTGTTCTCCACCAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CAA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTCTCTGCTTGTTCTGGTaGGTGTCACTCAGACAGTTG +
Preference number: 3 (lower is better)
Translates to: QRQRGGRPQALRLGLDLALCLFW*VSLRQL
Trigger: CAACTGTCTGAGTGACACCAACCAGAACAAGCAGAG...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GCTGGACTGACACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGCGCGGTCCGAGGCGTaGGAGAAGGCTTTGTTGCAG +
Preference number: 3 (lower is better)
Translates to: AGLTQPGALGLDGSDVQAARSEA*EKALLQ
Trigger: CTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCGC...TGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTGTCAGTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAGGAGCGCGGTCCGAGGCGTaGGAGAAGGCTTTGTTGCAG +
Preference number: 3 (lower is better)
Translates to: LRVHSAPGARASRSSCSGARSEA*EKALLQ
Trigger: CTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCGC...TCCTGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAACGCCACTGTCATTGTaGGGGGCACTGCCCAGAGGA +
Preference number: 3 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGTPLSL*GALPRG
Trigger: TCCTCTGGGCAGTGCCCCCAACAATGACAGTGGCGT...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CATAGGGGCGGAGGGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCCATGAGCAGGAATCCTaGAGTGACTTGAGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: HRGGGAHVGVRSHHPALAHEQES*SDLSFS
Trigger: GGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATG...GGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp TCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCTATGCGCCGGCGTGAGGTaGAGCAGCCCGGAGCCGCCG +
Preference number: 3 (lower is better)
Translates to: STAQACYFCSGWRAPQSLCAGVR*SSPEPP
Trigger: CGGCGGCTCCGGGCTGCTCAACCTCACGCCGGCGCA...TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGTCCTCCACGTCATTGCGCTGCTTCTaGGTGACGTGGGCATCTGGG +
Preference number: 3 (lower is better)
Translates to: HSPELSVLMALTCRQSSTSLRCF*VTWASG
Trigger: CCCAGATGCCCACGTCACCAAGAAGCAGCGCAATGA...CGTGGAGGACTGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCCGGAGGTGCACGTCATaGCGCTGCTTCTTGGTGACG +
Preference number: 3 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSRRCTS*RCFLVT
Trigger: CGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCG...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCGGACGCCACTGTCATTGTaGGGGGCACTGCCCAGAGGA +
Preference number: 3 (lower is better)
Translates to: VRLDVLHHVVWKHQVVLRTPLSL*GALPRG
Trigger: TCCTCTGGGCAGTGCCCCCAACAATGACAGTGGCGT...CCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CCCCAAGTTCCCTGTGGCGATTGCCCATCGTGGTGGGGTCAGGTGCCACTTCTGGGCTTGGCTGGCATGTaGCTGCAGGATTGGGGGAAC +
Preference number: 3 (lower is better)
Translates to: PQVPCGDCPSWWGQVPLLGLAGM*LQDWGN
Trigger: GTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCC...CAGAAGTGGCACCTGACCCCACCACGATGGGCAATCGCCACAGGGAACTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR GCA 72 bp GTTCGTACATGTGGATCTGGCCGTAGTAGTAGAGCATaGTGTGGTCCGGGGCCCCACCTGCGTCCTGCGGAG +
Preference number: 3 (lower is better)
Translates to: VRTCGSGRSSRA*CGPGPHLRPAE
Trigger: CTCCGCAGGACGCAGGTGGGGCCCCGGACCACAGCATGCTCTACTACTACGGCCAGATCCACATGTACGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CAA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACTGGGTGGGCGTGGCATaGATGGAGGTGAGGGCCATG +
Preference number: 3 (lower is better)
Translates to: GLDLAALVNGDRVDGAADWVGVA*MEVRAM
Trigger: CATGGCCCTCACCTCCATCAATGCCACGCCCACCCA...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGAGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: LEPVHGGHVFAQLEATSGVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...TCCGCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GGTGCTCTCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 3 (lower is better)
Translates to: GALWAARLRAGLTVPILFDSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...AAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGAGAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAAGCGGAGGGGCCCACGTaGGAGTCCGCAGCCACCATC +
Preference number: 3 (lower is better)
Translates to: QSQTRLYGVEEPALPNLEAEGPT*ESAATI
Trigger: GATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGC...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCATCATGTTCAGGAACTaGCTCTCCTCGGCGAGGCTG +
Preference number: 3 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCIMFRN*LSSARL
Trigger: CAGCCTCGCCGAGGAGAGCAAGTTCCTGAACATGAT...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 72 bp AGATGCCCTGGCTTGGCTGGCATGTTGCTGCAGGATTaGGGGAACTGGTTGAGGGCCCCACTGATGGTGCTG +
Preference number: 3 (lower is better)
Translates to: RCPGLAGMLLQD*GNWLRAPLMVL
Trigger: CAGCACCATCAGTGGGGCCCTCAACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCCAGGGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 72 bp TGTCTGCTGAGGGTGCCCCAGATGCCCTGGCTTGGCTaGCATGTTGCTGCAGGATTGGGGGAACTGGTTGAG +
Preference number: 3 (lower is better)
Translates to: CLLRVPQMPWLG*HVAAGLGELVE
Trigger: CTCAACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCCAGGGCATCTGGGGCACCCTCAGCAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CAA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGCCGGAGCTCTCGGTCTaGATGGCTCTGACGTGCAGG +
Preference number: 3 (lower is better)
Translates to: NVSREEAGTARSCKHQRLPELSV*MALTCR
Trigger: CCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGG...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCCATGAGCAGGAATCCTaGAGTGACTTGAGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: EASAFRGIHLPGALVQSAHEQES*SDLSFS
Trigger: GGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATG...GGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR TCA 72 bp CCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTaGGGTCAGCCAGCTGCTCCTGCGTCAGCGCCAGAG +
Preference number: 3 (lower is better)
Translates to: PPAYSHPCPDLP*GQPAAPASAPE
Trigger: CTCTGGCGCTGACGCAGGAGCAGCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000452692.5
3UTR TCA 72 bp CCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTaGGGTCAGCCAGCTGCTCCTGGGAGAGGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: PPAYSHPCPDLP*GQPAAPGRGEG
Trigger: CCCTTCCCCTCTCCCAGGAGCAGCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR GCA 72 bp CTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGGTaGACGTCATTGCGCTGCTTCTTGGTGACGTGGGCA +
Preference number: 3 (lower is better)
Translates to: LSPFSLSSGVRR*TSLRCFLVTWA
Trigger: TGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp CGGGCAGAAGGAAGGGAATCCGGAGGATACCAGGCATaGACACTGTGGCTTGGTGGAGAACACTGGGCTGCT +
Preference number: 3 (lower is better)
Translates to: RAEGRESGGYQA*TLWLGGEHWAA
Trigger: AGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCCGGATTCCCTTCCTTCTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 72 bp CCACGAGGGTCATCTGGTGGTAATAGTCTGAGGGGGTaGTGCCTGGAGCAGGAAGGCCAAACAGTCCCCTCT +
Preference number: 3 (lower is better)
Translates to: PRGSSGGNSLRG*CLEQEGQTVPS
Trigger: AGAGGGGACTGTTTGGCCTTCCTGCTCCAGGCACCACCCCCTCAGACTATTACCACCAGATGACCCTCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR CAA 90 bp TTTGAGCAGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: FEQRCAEVHVIALLLGDVVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...CACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCAGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKAVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGCTCTGCTTGTTCTGGTaGGTGTCACTCAGACAGTTG +
Preference number: 3 (lower is better)
Translates to: PQALRLGLDLAALVNGDRLCLFW*VSLRQL
Trigger: CAACTGTCTGAGTGACACCAACCAGAACAAGCAGAG...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGTCCTCCACGCTCTGCTTGTTCTGGTaGGTGTCACTCAGACAGTTG +
Preference number: 3 (lower is better)
Translates to: HSPELSVLMALTCRQSSTLCLFW*VSLRQL
Trigger: CAACTGTCTGAGTGACACCAACCAGAACAAGCAGAG...CGTGGAGGACTGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGCTGTCCCCATTCTCTTaGAGCAGCGGTGTGCGGAGG +
Preference number: 3 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLLSPFS*SSGVRR
Trigger: CCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAG...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp TTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCATGAGCAGGAATCCTaGAGTGACTTGAGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: LRTVARVLAKGRLLLHHRHEQES*SDLSFS
Trigger: GGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATG...GCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CAA 90 bp CGGTGCCGGAGCTCACCTCATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCGGGAGGGGAGGCAGCTaGGTGTTCCGCGTGTGTGGA +
Preference number: 3 (lower is better)
Translates to: RCRSSPHSTAQACYFCSGGRGGS*VFRVCG
Trigger: TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCC...GCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAGCTCCGGCACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CAA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: NVSREEAGTARSCKHQRLVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GGCCTGCCACGAGGGTCATCTGGTGGTAATAGTCTGAGGGGGTGGTGCCTGGAGCTCTGCTTGTTCTGGTaGGTGTCACTCAGACAGTTG +
Preference number: 3 (lower is better)
Translates to: GLPRGSSGGNSLRGWCLELCLFW*VSLRQL
Trigger: CAACTGTCTGAGTGACACCAACCAGAACAAGCAGAG...CTCCAGGCACCACCCCCTCAGACTATTACCACCAGATGACCCTCGTGGCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR-3UTR CAA 90 bp AGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGGCATCTGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 3 (lower is better)
Translates to: SGVRRCTSLRCFLVTWASDSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...AGATGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGTCATTGCGCTGCTTCTaGGTGACGTGGGCATCTGGG +
Preference number: 3 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLSLRCF*VTWASG
Trigger: CCCAGATGCCCACGTCACCAAGAAGCAGCGCAATGA...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTTGAGCTTCTCCTTCTaGAGCTGCTCGAACCGGTGC +
Preference number: 3 (lower is better)
Translates to: VVWGCQRSQCFPWDTPARLSFSF*SCSNRC
Trigger: GCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAA...CCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CCCCAGATGCCCTGGCTTGGCTGGCATGTTGCTGCAGGATTGGGGGAACTGGTTACAGGCATGTTATTTTaGTTCAGGCTGGAGGGCGCC +
Preference number: 3 (lower is better)
Translates to: PQMPWLGWHVAAGLGELVTGMLF*FRLEGA
Trigger: GGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGT...AACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCCAGGGCATCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CAA 90 bp GGAGGATACCAGGCATGCACACTGTGGCTTGGTGGAGAACACTGGGCTGCTGGTCAGGCCCTGGAGTTTTaGGTGGTAAAGTGGGTGGAC +
Preference number: 3 (lower is better)
Translates to: GGYQACTLWLGGEHWAAGQALEF*VVKWVD
Trigger: GTCCACCCACTTTACCACCAAAAACTCCAGGGCCTG...ACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CAA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGTCTCTGGACAGAGTTaGATGTGCTGGGACGCAGCG +
Preference number: 3 (lower is better)
Translates to: NVSREEAGTARSCKHQRLVSGQS*MCWDAA
Trigger: CGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGAC...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CAA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGACCCAGATGCCCTGGCTaGGCTGGCATGTTGCTGCAG +
Preference number: 3 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRPRCPG*AGMLLQ
Trigger: CTGCAGCAACATGCCAGCCAAGCCAGGGCATCTGGG...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR-3UTR CAA 90 bp CTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGATGACGATCATGCACACTGTGGCTaGGTGGAGAACACTGGGCTG +
Preference number: 3 (lower is better)
Translates to: LVSGQSLMCWDAASPDDDHAHCG*VENTGL
Trigger: CAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATG...ATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR GCA 72 bp GACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTaGATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: DLSFSFLSCSNR*MVVMCLRSWRP
Trigger: TGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp AGGGCGTCTACGGTGCCGGAGCTCACCTCATTCCACTaGACAGGCATGTTATTTTTGTTCAGGCTGGAGGGC +
Preference number: 3 (lower is better)
Translates to: RASTVPELTSFH*TGMLFLFRLEG
Trigger: GCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAGCTCCGGCACCGTAGACGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CCA 72 bp GCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTaGGACGCAGCGAGCCCAGATGACGATGTTGGCCTT +
Preference number: 3 (lower is better)
Translates to: AVGLVSGQSLMC*DAASPDDDVGL
Trigger: AAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CAA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGGCGCGGTCCGAGGCGTaGGAGAAGGCTTTGTTGCAG +
Preference number: 3 (lower is better)
Translates to: DSALRSRRASSTKPGIRMARSEA*EKALLQ
Trigger: CTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCGC...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp TTTGCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTaGTGGGACGCAGCGAGCCCAGATGACGATGTTGGC +
Preference number: 3 (lower is better)
Translates to: FAVGLVSGQSLM*WDAASPDDDVG
Trigger: GCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 72 bp GGCTACATTCTACATGCAAACACTGTAAACACGGTCTaGAGAGGCCAGGGCAGCTTCTGGGCTTGCCCCAAG +
Preference number: 3 (lower is better)
Translates to: GYILHANTVNTV*RGQGSFWACPK
Trigger: CTTGGGGCAAGCCCAGAAGCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CAA 90 bp ATGTGCTGGGACGCAGCGAGCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCTGGGTGGACGTTGCATaGGAGAAACAGGATTGGGTA +
Preference number: 3 (lower is better)
Translates to: MCWDAASPDDDVGLVLKLWVDVA*EKQDWV
Trigger: TACCCAATCCTGTTTCTCCAATGCAACGTCCACCCA...GAGTTTGAGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CAA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGTGCTGTTTGGCAAGGTaGCCACACATTCCCCATGAA +
Preference number: 3 (lower is better)
Translates to: NVSREEAGTARSCKHQRLCCLAR*PHIPHE
Trigger: TTCATGGGGAATGTGTGGCAACCTTGCCAAACAGCA...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR TCA 72 bp GGGACTGGCAAGGGAAATCCTATCTCAGGAAGGCGATaGACACCACCACAGAGCCACAGACCCTTAGCAATG +
Preference number: 3 (lower is better)
Translates to: GTGKGNPISGRR*TPPQSHRPLAM
Trigger: CATTGCTAAGGGTCTGTGGCTCTGTGGTGGTGTTCATCGCCTTCCTGAGATAGGATTTCCCTTGCCAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 72 bp CATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTaGAGGGCGCCCCAAAGCCTAACTGGCATCCTCCCA +
Preference number: 3 (lower is better)
Translates to: HSTAQACYFCSG*RAPQSLTGILP
Trigger: TGGGAGGATGCCAGTTAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CCA 72 bp GGCTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTaGGTGGACGTTGCATTGGAGAAACAGGATTGGGTA +
Preference number: 3 (lower is better)
Translates to: GCRQALEFLVVK*VDVALEKQDWV
Trigger: TACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CAA 90 bp TTGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGCATGGTGGTCGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 3 (lower is better)
Translates to: LSDLSFSFLSCSNRCMVVDSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...GACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 3 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKADSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR TCA 72 bp ACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGATaGCGATGTTGGCCTTGTCCTCAAACTCTCCTAAGA +
Preference number: 3 (lower is better)
Translates to: TEFDVLGRSEPR*RCWPCPQTLLR
Trigger: TCTTAGGAGAGTTTGAGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR GCA 72 bp GAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGAGCTaGTCGAACCGGTGCATGGTGGTCATGTGTTTGCGC +
Preference number: 3 (lower is better)
Translates to: ESLSDLSFSFLS*SNRCMVVMCLR
Trigger: GCGCAAACACATGACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAAGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR GCA 72 bp TGGGTCTTGGTCACACTGAACAGGAAAATTCAACGATaGTCCCTCAGAGTCCTGAGGATCAACCCCTTCCCC +
Preference number: 3 (lower is better)
Translates to: WVLVTLNRKIQR*SLRVLRINPFP
Trigger: GGGGAAGGGGTTGATCCTCAGGACTCTGAGGGAGCATCGTTGAATTTTCCTGTTCAGTGTGACCAAGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR GCA 72 bp AGGCCAAGGTCACAGTCAGAGTCACACTCTGAGTGGTaGTGTTTGGCAAGGTTGCCACACATTCCCCATGAA +
Preference number: 3 (lower is better)
Translates to: RPRSQSESHSEW*CLARLPHIPHE
Trigger: TTCATGGGGAATGTGTGGCAACCTTGCCAAACAGCACCACTCAGAGTGTGACTCTGACTGTGACCTTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR TCA 72 bp CTCATTAAGGCCAAGGTCACAGTCAGAGTCACACTCTaGGTGGTGCTGTTTGGCAAGGTTGCCACACATTCC +
Preference number: 3 (lower is better)
Translates to: LIKAKVTVRVTL*VVLFGKVATHS
Trigger: GGAATGTGTGGCAACCTTGCCAAACAGCACCACTCAGAGTGTGACTCTGACTGTGACCTTGGCCTTAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CAA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAATTTCCAGGTGGGTCTaGGTCACACTGAACAGGAAA +
Preference number: 3 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRISRWV*VTLNRK
Trigger: TTTCCTGTTCAGTGTGACCAAGACCCACCTGGAAAT...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR GCA 72 bp GGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTaGATTGGAGAAACAGGATTGGGTAAACACGCAACT +
Preference number: 3 (lower is better)
Translates to: GPGVFGGKVGGR*IGETGLGKHAT
Trigger: AGTTGCGTGTTTACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 72 bp TTGGCAAGGTTGCCACACATTCCCCATGAAAAGGTTTaGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: LARLPHIPHEKV*GVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACCCCAAACCTTTTCATGGGGAATGTGTGGCAACCTTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CAA 90 bp ACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTCTCTGCTTGTTCTGGTaGGTGTCACTCAGACAGTTG +
Preference number: 3 (lower is better)
Translates to: TRLYGVEEPALPNLESECLCLFW*VSLRQL
Trigger: CAACTGTCTGAGTGACACCAACCAGAACAAGCAGAG...ACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGACAGAATATATACAGGTaGGGACTGGCAAGGGAAATC +
Preference number: 3 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRQNIYR*GLAREI
Trigger: GATTTCCCTTGCCAGTCCCAACCTGTATATATTCTG...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CAA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGTTGAGCTTCTCCTTCTaGAGCTGCTCGAACCGGTGC +
Preference number: 3 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMLSFSF*SCSNRC
Trigger: GCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAA...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR-3UTR CAA 90 bp GTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTGGCAAGGGGGCAGCTTCTGGGCTaGCCCCAAGGAGTACATTTT +
Preference number: 3 (lower is better)
Translates to: VYSGMSSVQNIYRLGLARGQLLG*PQGVHF
Trigger: AAAATGTACTCCTTGGGGCAAGCCCAGAAGCTGCCC...CCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR-3UTR CAA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGATTTGGAGATATAAATTaGGCTGGACGACTCACCTAC +
Preference number: 3 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRFGDIN*AGRLTY
Trigger: GTAGGTGAGTCGTCCAGCCAAATTTATATCTCCAAA...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 72 bp GTAAAGTGGGTGGACGTTGCATTGGAGAAACAGGATTaGGTAAACACGCAACTTCCTCTTCCTACTGAGAGA +
Preference number: 3 (lower is better)
Translates to: VKWVDVALEKQD*VNTQLPLPTER
Trigger: TCTCTCAGTAGGAAGAGGAAGTTGCGTGTTTACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR TCA 72 bp AATTCACCCTACAGTGTGTTCAGGAATGATGTCTCCTaGAGCCAGTTCCAAATTCCATTTCCAGGTGGGTCT +
Preference number: 3 (lower is better)
Translates to: NSPYSVFRNDVS*SQFQIPFPGGS
Trigger: AGACCCACCTGGAAATGGAATTTGGAACTGGCTTCAGGAGACATCATTCCTGAACACACTGTAGGGTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CCA 72 bp GGATGTCTTCTGTACAGAATATATACAGGTTGGGACTaGCAAGGGAAATCCTATCTCAGGAAGGCGATGAAC +
Preference number: 3 (lower is better)
Translates to: GCLLYRIYTGWD*QGKSYLRKAMN
Trigger: GTTCATCGCCTTCCTGAGATAGGATTTCCCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp CCGCGTGGCCGTGGCCATAGGTCGGCCCGTCGCTGCCACGCCGCGGCCCCAGTGGCCCCGGGGCTGGACTaGCACAGCCCGGAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: PRGRGHRSARRCHAAAPVAPGLD*HSPELS
Trigger: CGAGAGCTCCGGGCTGTGTCAGTCCAGCCCCGGGGC...CACTGGGGCCGCGGCGTGGCAGCGACGGGCCGACCTATGGCCACGGCCACGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGGGCATCGGGCCGCCGCACAGGGTCGCTGGCCCGCCTGGCTCCGCCGCCTGGACCGCAGCCACCATCCTaGGCTGGCCGTGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RASGRRTGSLARLAPPPGPQPPS*AGRAAP
Trigger: CGGGGCTGCACGGCCAGCGCAGGATGGTGGCTGCGG...TCCAGGCGGCGGAGCCAGGCGGGCCAGCGACCCTGTGCGGCGGCCCGATGCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTGGGGCCGCCAGTGGCTaGCGCGTACTTGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: EALHPRQGQGIGPPHRVAGAASG*RVLGPQ
Trigger: CTGCGGGCCAAGTACGCGGCAGCCACTGGCGGCCCC...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGCCAGGCCGCCGTCGGTaGTCGGGTGGCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQPGRRR*SGGSAG
Trigger: GCCTGCAGAGCCACCCGAGCACCGACGGCGGCCTGG...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GCCCTGGGAGGGGGCTCCGCTGCGGGGCTGCAGGTGTGGCTGCGTGCTGTCCAGGAGCCGCCGCTGCACTaGCTGGCCTCGCTCGAGCGC +
Preference number: 4 (lower is better)
Translates to: ALGGGSAAGLQVWLRAVQEPPLH*LASLER
Trigger: GCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTC...CTGGACAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCCAGGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGGCCACCATCCTGCGCTaGCCGTGCAGCCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQATILR*PCSPGL
Trigger: CAGCCCGGGGCTGCACGGCCAGCGCAGGATGGTGGC...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGACCCTGGGGATGCCCTaGGAGGGGGCTCCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQTLGMP*EGAPLR
Trigger: CCGCAGCGGAGCCCCCTCCCAGGGCATCCCCAGGGT...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GGGATGCCCTGGGAGGGGGCTCCGCTGCGGGGCTGCAGGTGTGGCTGCGTGCTGGCACGTACCCCACGGTaGCGGCCAGTGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GMPWEGAPLRGCRCGCVLARTPR*RPVGLG
Trigger: GCCCAGCCCCACTGGCCGCCACCGTGGGGTACGTGC...CAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCCAGGGCATCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp CCGCGTGGCCGTGGCCATAGGTCGGCCCGTCGCTGCCACGCCGCGGCCCCAGTGCGCAGGCTGTACTGCTaGGCCGGCGTGAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: PRGRGHRSARRCHAAAPVRRLYC*AGVRLS
Trigger: GCTCAACCTCACGCCGGCGCAGCAGTACAGCCTGCG...CACTGGGGCCGCGGCGTGGCAGCGACGGGCCGACCTATGGCCACGGCCACGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGGATGCCCTGGGAGGGGGCTCCGCTGCGGGGCTGCAGGTGTGGCTGCGTGCTGCCGTCGGTGCTCGGGTaGCTCTGCAGGCGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GMPWEGAPLRGCRCGCVLPSVLG*LCRRRP
Trigger: AGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGG...CAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCCAGGGCATCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AGGGCATCGGGCCGCCGCACAGGGTCGCTGGCCCGCCTGGCTCCGCCGCCTGGACGTGCAGCCCCGGGCTaGGTAGTCTGGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RASGRRTGSLARLAPPPGRAAPG*VVWGCQ
Trigger: CTGACAACCCCAGACTACCCAGCCCGGGGCTGCACG...TCCAGGCGGCGGAGCCAGGCGGGCCAGCGACCCTGTGCGGCGGCCCGATGCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GCTCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTGGAGATGGGGTGCGCTaGCAGCGCCCCCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: APASAPEGRPAAGPQARSGDGVR*QRPRSA
Trigger: TGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCC...AGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR CAA 72 bp TTGGCCCGCAGGCTGTACTGCTGCGCCGGCGTGAGGTaGAGCAGCCCGGAGCCGCCGCTGCACTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LARRLYCCAGVR*SSPEPPLHWLA
Trigger: GGCCAGCCAGTGCAGCGGCGGCTCCGGGCTGCTCAACCTCACGCCGGCGCAGCAGTACAGCCTGCGGGCCAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CCGCGTGGCCGTGGCCATAGGTCGGCCCGTCGCTGCCACGCCGCGGCCCCAGTGCTCGGAGGCAGTGGCTaGGGCAGACGTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: PRGRGHRSARRCHAAAPVLGGSG*GRRLHL
Trigger: GAGATGGAGACGTCTGCCTCAGCCACTGCCTCCGAG...CACTGGGGCCGCGGCGTGGCAGCGACGGGCCGACCTATGGCCACGGCCACGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCAGACACCTGGCCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCATGCTGCTGGCCTCGGTaGTCTCTGGGCCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PDTWPCVSARGEAGRRPSCCWPR*SLGRQA
Trigger: AGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCA...TGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR CCA 90 bp AGGGCATCGGGCCGCCGCACAGGGTCGCTGGCCCGCCTGGCTCCGCCGCCTGGATGCGATTCTGGTGCTTaGCGCGGTCCGAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: RASGRRTGSLARLAPPPGCDSGA*RGPRRW
Trigger: CCAACGCCTCGGACCGCGCCAAGCACCAGAATCGCA...TCCAGGCGGCGGAGCCAGGCGGGCCAGCGACCCTGTGCGGCGGCCCGATGCCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCAGACACCTGGCCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCACCTGGCTGGTGCTGCTaGCCTCGGTGCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PDTWPCVSARGEAGRRPSPGWCC*PRCSLG
Trigger: GCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGG...TGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR CCA 90 bp GCTCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTCGGAGGGGCCCACGTTaGAGTCCGCAGCCACCATCC +
Preference number: 4 (lower is better)
Translates to: APASAPEGRPAAGPQARSRRGPR*SPQPPS
Trigger: GGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCG...AGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000452692.5
CDS-3UTR GCA 90 bp CCAGACACCTGGCCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCATTGGGCAGCTACCGCTaGTGCTGCCGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PDTWPCVSARGEAGRRPSLGSYR*CCRCSH
Trigger: GTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCCCAA...TGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR GCA 90 bp GCTCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTGCCTTGAAGGGCTTCTaGTCCCGCGTGCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: APASAPEGRPAAGPQARSALKGF*SRVQAC
Trigger: GCAGGCCTGCACGCGGGAGCAGAAGCCCTTCAAGGC...AGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000452692.5
CDS-3UTR GCA 90 bp CATAGGGGCGGAGGGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCGGCCGCCAGGCTCCGTaGCGGCCTCACTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: HRGGGAHVGVRSHHPALAGRQAP*RPHCPH
Trigger: ATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCC...GGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCCGCCACGGCCTGGCTGGTaGTGCTGGCCTCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: WSPRSRTAPTAAGSAAAPPRPGW*CWPRCS
Trigger: AGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGG...CGGGGCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGGGCATCGGGCCGCCGCACAGGGTCGCTGGCCCGCCTGGCTCCGCCGCCTGGAGGGTGTGTCATCCAGTaGCGTCAGGTCTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RASGRRTGSLARLAPPPGGCVIQ*RQVSQA
Trigger: AGCCTGGGAGACCTGACGGCACTGGATGACACACCC...TCCAGGCGGCGGAGCCAGGCGGGCCAGCGACCCTGTGCGGCGGCCCGATGCCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGGGCGGCCTGTCGCGGCGCTCCTaGAGCTGGCTCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: SVLGWLCRRRPRLSAQGGLSRRS*SWLSMV
Trigger: GACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAG...GCCGCCCTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTTGAGCAGCCCGGAGCCGCCGCTGCACTGGCTGGCCTCGCTCGAGCGCCGCGACTGTCGCGGCGCTCCTaGAGCTGGCTCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: VEQPGAAAALAGLARAPRLSRRS*SWLSMV
Trigger: GACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAG...TCGCGGCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTCCGGGCTGCTCAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTTGAGCAGCCCGGAGCCGCCGCTGCACTGGCTGGCCTCGCTCGAGCGCCGCGACGCAGGCTGTACTGCTaGGCCGGCGTGAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: VEQPGAAAALAGLARAPRRRLYC*AGVRLS
Trigger: GCTCAACCTCACGCCGGCGCAGCAGTACAGCCTGCG...TCGCGGCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTCCGGGCTGCTCAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGCGTGGCCGTGGCCATAGGTCGGCCCGTCGCTGCCACGCCGCGGCCCCAGTGGCTTCTCGGAGGCAGTaGCTGAGGCAGACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PRGRGHRSARRCHAAAPVASRRQ*LRQTSP
Trigger: TGGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGC...CACTGGGGCCGCGGCGTGGCAGCGACGGGCCGACCTATGGCCACGGCCACGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCGGCCTCGGTGCTCTCTaGGCCGCCAGGCTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGGLGAL*AARLRA
Trigger: GGCACGGAGCCTGGCGGCCCAGAGAGCACCGAGGCC...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGCGGCGCTCCTGCAGCTaGCTCAGCATGGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQRRSCS*LSMVTS
Trigger: CGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCG...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGACGTTGTGGGTGCTGTaGAAGCGCTGCACCCGCGGC +
Preference number: 4 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQTLWVL*KRCTRG
Trigger: GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGT...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGGGCATCGGGCCGCCGCACAGGGTCGCTGGCCCGCCTGGCTCCGCCGCCTGGACCAGATGCCCTGGCTTaGCTGGCATGTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RASGRRTGSLARLAPPPGPDALA*LACCCR
Trigger: CCTGCAGCAACATGCCAGCCAAGCCAGGGCATCTGG...TCCAGGCGGCGGAGCCAGGCGGGCCAGCGACCCTGTGCGGCGGCCCGATGCCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GTTGAGCAGCCCGGAGCCGCCGCTGCACTGGCTGGCCTCGCTCGAGCGCCGCGACTGGACTGGGTGAGGTaGTGGCACTCCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VEQPGAAAALAGLARAPRLDWVR*WHSSQG
Trigger: GCCCTGGCTGGAGTGCCACCACCTCACCCAGTCCAG...TCGCGGCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTCCGGGCTGCTCAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCGCCCCGGGGCTGGACTaGCACAGCCCGGAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSAPGLD*HSPELS
Trigger: CGAGAGCTCCGGGCTGTGTCAGTCCAGCCCCGGGGC...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp TGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCCGCGGTGTAGGCCGAGCTaGCCGTGCTGGTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: WSPRSRTAPTAAGSAAAPRCRPS*PCWWSC
Trigger: ACAGCTCCACCAGCACGGTCAGCTCGGCCTACACCG...CGGGGCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGCGACAGCCATGTTGCTaGTGCCTGCGGGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQRQPCC*CLRGWR
Trigger: CCTCCATCCCCGCAGGCATCAGCAACATGGCTGTCG...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGAGCTACCGCTGCTGCTaGCGCTGCAGCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQSYRCC*RCSHHQ
Trigger: TTGGTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCT...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCGGCCGCCAGGCTCCGTaGCGGCCTCACTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGGRQAP*RPHCPH
Trigger: ATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCC...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGCGGCCTGGCTGGTGCTaGTGGCCTCGGTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PGGEAAWCSACVESARPMRPGWC*WPRCSL
Trigger: CAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCG...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CATAGGGGCGGAGGGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCCCACGGCCTGGCTGGTaGTGCTGGCCTCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HRGGGAHVGVRSHHPALAPRPGW*CWPRCS
Trigger: AGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGG...GGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCGAGAGGGCTCGCTGCTaGAGGACGACTGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSERARC*RTTGPR
Trigger: CCGGGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTC...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGCGTGGCCGTGGCCATAGGTCGGCCCGTCGCTGCCACGCCGCGGCCCCAGTGTGGTGGTCATGTGTTTaGGCAGCTGGAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: PRGRGHRSARRCHAAAPVWWSCV*AAGGHQ
Trigger: CTGGTGGCCTCCAGCTGCGCAAACACATGACCACCA...CACTGGGGCCGCGGCGTGGCAGCGACGGGCCGACCTATGGCCACGGCCACGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGCTGGCCGTGCAGCCCCGGGCTGGGTAGTCTGGGGTTGTCAGAGAAGCCAGTGGGGGCCGCCAGTGGCTaGCGCGTACTTGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RWPCSPGLGSLGLSEKPVGAASG*RVLGPQ
Trigger: CTGCGGGCCAAGTACGCGGCAGCCACTGGCGGCCCC...CACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCCAGGCCGCCGTCGGTaGTCGGGTGGCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPPGRRR*SGGSAG
Trigger: GCCTGCAGAGCCACCCGAGCACCGACGGCGGCCTGG...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCCAGGCCGCCGTCGGTaGTCGGGTGGCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AFRGIHLPGALVQSATGVPGRRR*SGGSAG
Trigger: GCCTGCAGAGCCACCCGAGCACCGACGGCGGCCTGG...CACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCGATACACCTGCCCGGTaGCCTCGTCCAGAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: GSGPGFTLWVLWKRCTRGDTPAR*PRPERH
Trigger: GTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATC...GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GCCCTGGGAGGGGGCTCCGCTGCGGGGCTGCAGGTGTGGCTGCGTGCTGTCCAGCCAGGGCGTCTACGGTaGCGGAGCTCACCTCATTCC +
Preference number: 4 (lower is better)
Translates to: ALGGGSAAGLQVWLRAVQPGRLR*RSSPHS
Trigger: GGAATGAGGTGAGCTCCGGCACCGTAGACGCCCTGG...CTGGACAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCCAGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCGGGAGGGGGCTCCGCTaGGGGGCTGCAGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSGRGLR*GAAGVA
Trigger: AGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCC...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp CGTCTGAGAGTGGGGAGATGGACAGCGCCCGCTTGCGGCTCAGGCGGGGCGTCAGGGCGCGGGGTGGCCTaGCACGAGGGTCATCTGGTG +
Preference number: 4 (lower is better)
Translates to: RLRVGRWTAPACGSGGASGRGVA*HEGHLV
Trigger: CACCAGATGACCCTCGTGGCAGGCCACCCCGCGCCC...TGACGCCCCGCCTGAGCCGCAAGCGGGCGCTGTCCATCTCCCCACTCTCAGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CCA 90 bp GGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGCCATGGGCTGCTaGGCCAGGAAGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GSGPGFTLWVLWKRCTRGRAMGC*ARKVGE
Trigger: CTCACCCACCTTCCTGGCCCAGCAGCCCATGGCCCT...GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTAACCGGCCTCGGTGCTCTCTaGGCCGCCAGGCTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: RLGPGCTLTPRGLSPSLTGLGAL*AARLRA
Trigger: GGCACGGAGCCTGGCGGCCCAGAGAGCACCGAGGCC...GGTTAGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTGGCCTCGGTGCTCTCTaGGCCGCCAGGCTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: QLAQHGHLARGQLRQPRVGLGAL*AARLRA
Trigger: GGCACGGAGCCTGGCGGCCCAGAGAGCACCGAGGCC...AACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCGGCCTCGGTGCTCTCTaGGCCGCCAGGCTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSGLGAL*AARLRA
Trigger: GGCACGGAGCCTGGCGGCCCAGAGAGCACCGAGGCC...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCGGCGCTCCTGCAGCTaGCTCAGCATGGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: RQRGGRPQALRLGLDLAARRSCS*LSMVTS
Trigger: CGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCG...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGCCGTCGGTGCTCGGGTaGCTCTGCAGGCGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GEAAWCSACVESARPMSRPSVLG*LCRRRP
Trigger: AGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGG...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCGAGGCTTCACCTGGCTaGCCAGGGCGTCTACGGTGC +
Preference number: 4 (lower is better)
Translates to: GSGPGFTLWVLWKRCTRGEASPG*PGRLRC
Trigger: GCACCGTAGACGCCCTGGCCAGCCAGGTGAAGCCTC...GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CCCATCGGGCCTGTTTGGGGCTCCATGAAGCCAGGCTGGCGGGCAGGCAGAAGGACCCTGGGGATGCCCTaGGAGGGGGCTCCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PIGPVWGSMKPGWRAGRRTLGMP*EGAPLR
Trigger: CCGCAGCGGAGCCCCCTCCCAGGGCATCCCCAGGGT...CCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GGGATGCCCTGGGAGGGGGCTCCGCTGCGGGGCTGCAGGTGTGGCTGCGTGCTGTCCATGAAGCCAGGCTaGCGGGCAGGCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GMPWEGAPLRGCRCGCVLSMKPG*RAGRRL
Trigger: CAGCCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGA...CAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCCAGGGCATCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGCACGGTGGCGGCCAGTaGGGCTGGGCTCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VLSVGYTCPVPSSRAPLAHGGGQ*GWARGE
Trigger: CTCCCCTCGAGCCCAGCCCCACTGGCCGCCACCGTG...CGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CCCATCGGGCCTGTTTGGGGCTCCATGAAGCCAGGCTGGCGGGCAGGCAGAAGGCACGGTGGCGGCCAGTaGGGCTGGGCTCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PIGPVWGSMKPGWRAGRRHGGGQ*GWARGE
Trigger: CTCCCCTCGAGCCCAGCCCCACTGGCCGCCACCGTG...CCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CAA 72 bp TGGCATCCTCCCAGCATAGGGGCGGAGGGGCCCACGTaGGAGTCCGCAGCCACCATCCTGCGCTGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: WHPPSIGAEGPT*ESAATILRWPC
Trigger: GCACGGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATGCTGGGAGGATGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGAGCTACCGCTGCTGCTaGCGCTGCAGCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: RQRGGRPQALRLGLDLAASYRCC*RCSHHQ
Trigger: TTGGTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCT...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCCGAGCTACCGCTGCTGCTaGCGCTGCAGCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: WSPRSRTAPTAAGSAAAPSYRCC*RCSHHQ
Trigger: TTGGTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCT...CGGGGCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGTCCCGCGTGCAGGCCTaGCAGCGGCACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: PGGEAAWCSACVESARPMSRVQA*QRHTNS
Trigger: GGAGTTTGTGTGCCGCTGGCAGGCCTGCACGCGGGA...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTTGGGTGCGATTCTGGTaGTTGGCGCGGTCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: QRQRGGRPQALRLGLDLAWVRFW*LARSEA
Trigger: CGCCTCGGACCGCGCCAAGCACCAGAATCGCACCCA...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTGGCCGCCAGGCTCCGTaGCGGCCTCACTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: AGGAVAALLQLAQHGHLAGRQAP*RPHCPH
Trigger: ATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCC...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGCGGCCTGGCTGGTGCTaGTGGCCTCGGTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRRPGWC*WPRCSL
Trigger: CAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCG...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTGAGAGGGCTCGCTGCTaGAGGACGACTGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: QLAQHGHLARGQLRQPRVERARC*RTTGPR
Trigger: CCGGGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTC...AACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGGGCATCGGGCCGCCGCACAGGGTCGCTGGCCCGCCTGGCTCCGCCGCCTGGAGCTTGGCTGGCATGTTaGTGCAGGATTGGGGGAACT +
Preference number: 4 (lower is better)
Translates to: RASGRRTGSLARLAPPPGAWLAC*CRIGGT
Trigger: AGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGC...TCCAGGCGGCGGAGCCAGGCGGGCCAGCGACCCTGTGCGGCGGCCCGATGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp TCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGGGCGGCGTTCCCTGTGGCGATTaGCCATCGTGGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SVLGWLCRRRPRLSAQGGVPCGD*PSWWGQ
Trigger: CTGACCCCACCACGATGGGCAATCGCCACAGGGAAC...GCCGCCCTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp CCCGCTTGCGGCTCAGGCGGGGCGTCACCCGCGGGCTGGAGAAACGGGACACGTGTGCGGATCATCCGCTaGAGGTCCAGGCTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: PACGSGGASPAGWRNGTRVRIIR*RSRLAS
Trigger: AGACGCCAGCCTGGACCTGCAGCGGATGATCCGCAC...ACGTGTCCCGTTTCTCCAGCCCGCGGGTGACGCCCCGCCTGAGCCGCAAGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR GCA 90 bp GCTCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTGCGAGTTGGGTGAGGTaGGGATCATCCGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: APASAPEGRPAAGPQARSASWVR*GSSAAG
Trigger: ACCTGCAGCGGATGATCCGCACCTCACCCAACTCGC...AGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR GCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCAGACACCTGGCCCTaGGTCAGCGCCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGPDTWP*VSARGE
Trigger: CTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR CCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGGGCCATGGGCTGCTaGGCCAGGAAGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PGGEAAWCSACVESARPMRAMGC*ARKVGE
Trigger: CTCACCCACCTTCCTGGCCCAGCAGCCCATGGCCCT...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCGGCCTCGGTGCTCTCTaGGCCGCCAGGCTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: EASAFRGIHLPGALVQSAGLGAL*AARLRA
Trigger: GGCACGGAGCCTGGCGGCCCAGAGAGCACCGAGGCC...GGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCGGAGGGGAGGCAGCTTaGTGTTCCGCGTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GSGPGFTLWVLWKRCTRGGGEAA*CSACVE
Trigger: CTCCACACACGCGGAACACCAAGCTGCCTCCCCTCC...GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTCTGCACCACGTCGTCTaGAAGCACCAGGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: EALHPRQGQGIGPPHRVALHHVV*KHQVVL
Trigger: GAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAG...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CAGGGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGTGCAGCCCCGGGCTaGGTAGTCTGGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: QGGSGPGFTLWVLWKRCTRAAPG*VVWGCQ
Trigger: CTGACAACCCCAGACTACCCAGCCCGGGGCTGCACG...GGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CAGGGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCGAGGCTTCACCTGGCTaGCCAGGGCGTCTACGGTGC +
Preference number: 4 (lower is better)
Translates to: QGGSGPGFTLWVLWKRCTEASPG*PGRLRC
Trigger: GCACCGTAGACGCCCTGGCCAGCCAGGTGAAGCCTC...GGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGGTCATGCCAGGACACTaGCTGCCTGCCACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQVMPGH*LPATGC
Trigger: ACAGCCAGTGGCAGGCAGCCAGTGTCCTGGCATGAC...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp TCTCCCAGGCTCCCGGGCCCCGTCCCCGGCATCTCCACGCCACTGTCATTGTTGTCCTGCGGAGGCGGCTaGGGAGGCACCGACCCCATG +
Preference number: 4 (lower is better)
Translates to: SPRLPGPVPGISTPLSLLSCGGG*GGTDPM
Trigger: CATGGGGTCGGTGCCTCCCCAGCCGCCTCCGCAGGA...CAACAATGACAGTGGCGTGGAGATGCCGGGGACGGGGCCCGGGAGCCTGGGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACG +
Preference number: 4 (lower is better)
Translates to: EALHPRQGQGIGPPHRVATLLRL*MATGLT
Trigger: CGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGT...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GGGATGCCCTGGGAGGGGGCTCCGCTGCGGGGCTGCAGGTGTGGCTGCGTGCTGCCTCAGGCTCGGTCTTaGCCTTGCTGCGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: GMPWEGAPLRGCRCGCVLPQARS*PCCACE
Trigger: TTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGG...CAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCCAGGGCATCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp CAGGGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCGCCTCTGCTGTTTCCTaGCTGGACGGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QGGSGPGFTLWVLWKRCTASAVS*LDGMAA
Trigger: GGCTGCCATGCCGTCCAGTCAGGAAACAGCAGAGGC...GGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp CAGGGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCTGCTGGACACCTGGTTaGCCCCTGGTGAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: QGGSGPGFTLWVLWKRCTCWTPG*PLVRAR
Trigger: CCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCA...GGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp GTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGGGCTCTGGGCAGCGATaGCCCCTCCGGGTGCACTCA +
Preference number: 4 (lower is better)
Translates to: VLSVGYTCPVPSSRAPLAGSGQR*PLRVHS
Trigger: TGAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCC...CGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CGTCTGAGAGTGGGGAGATGGACAGCGCCCGCTTGCGGCTCAGGCGGGGCGTCAGCTGAGGGCACCCGCTaGCAGATGCCCGTAGGAACC +
Preference number: 4 (lower is better)
Translates to: RLRVGRWTAPACGSGGASAEGTR*QMPVGT
Trigger: GGTTCCTACGGGCATCTGTCAGCGGGTGCCCTCAGC...TGACGCCCCGCCTGAGCCGCAAGCGGGCGCTGTCCATCTCCCCACTCTCAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR TCA 90 bp CCCGCTTGCGGCTCAGGCGGGGCGTCACCCGCGGGCTGGAGAAACGGGACACGTACACGTCCACGGGGTTaGGGTAGTCGTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: PACGSGGASPAGWRNGTRTRPRG*GSRGDG
Trigger: CCCATCTCCACGACTACCTCAACCCCGTGGACGTGT...ACGTGTCCCGTTTCTCCAGCCCGCGGGTGACGCCCCGCCTGAGCCGCAAGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR GCA 90 bp CATAGGGGCGGAGGGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCAGCTACCGCTGCTGCTaGCGCTGCAGCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: HRGGGAHVGVRSHHPALASYRCC*RCSHHQ
Trigger: TTGGTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCT...GGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGCGCCGTCCACTCCTGCCGCCACGGCCTCCATCGCCACGTTCTCGCTGATGCTTTGGGCAGCTACCGCTaGTGCTGCCGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RAVHSCRHGLHRHVLADALGSYR*CCRCSH
Trigger: GTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCCCAA...AGCATCAGCGAGAACGTGGCGATGGAGGCCGTGGCGGCAGGAGTGGACGGCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTTTGGGCAGCTACCGCTaGTGCTGCCGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QRGGRPQALRLGLDLAALLGSYR*CCRCSH
Trigger: GTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCCCAA...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTTCAGCCAGCTGCTCCTaGGTCAGCGCCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: QRGGRPQALRLGLDLAALSASCS*VSARGE
Trigger: CTCCCCTCTGGCGCTGACGCAGGAGCAGCTGGCTGA...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000452692.5
CDS-3UTR GCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGTCCCGCGTGCAGGCCTaGCAGCGGCACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: GEAAWCSACVESARPMSRSRVQA*QRHTNS
Trigger: GGAGTTTGTGTGCCGCTGGCAGGCCTGCACGCGGGA...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGGCCTTGAAGGGCTTCTaGTCCCGCGTGCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GEAAWCSACVESARPMSRALKGF*SRVQAC
Trigger: GCAGGCCTGCACGCGGGAGCAGAAGCCCTTCAAGGC...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGTGGGTGCGATTCTGGTaGTTGGCGCGGTCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRWVRFW*LARSEA
Trigger: CGCCTCGGACCGCGCCAAGCACCAGAATCGCACCCA...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGGAGAGGGGAAGGGCACACCCACATGAGCCGTGTCCAGACACCTGGCCCTGCGTGCTGCTGGCCTCGGTaGTCTCTGGGCCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GRGEGHTHMSRVQTPGPACCWPR*SLGRQA
Trigger: AGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCA...CGCAGGGCCAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTTCCCCTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR GCA 90 bp CACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTGCGGCCTGGCTGGTGCTaGTGGCCTCGGTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: HLPGALVQSATGVRLDVLRPGWC*WPRCSL
Trigger: CAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCG...CAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCCACGGCCTGGCTGGTaGTGCTGGCCTCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSPRPGW*CWPRCS
Trigger: AGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGG...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCAGGAGAGGGCTCGCTGCTaGAGGACGACTGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RTVARVLAKGRLLLHHRQERARC*RTTGPR
Trigger: CCGGGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTC...CTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTCATTGTTGGGGGCACTaGCCAGAGGAGAGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: QRQRGGRPQALRLGLDLAHCWGH*PEERAR
Trigger: GCGAGCCCTCTCCTCTGGGCAGTGCCCCCAACAATG...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGGGGTGTGTCATCCAGTaGCGTCAGGTCTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RQRGGRPQALRLGLDLAAGCVIQ*RQVSQA
Trigger: AGCCTGGGAGACCTGACGGCACTGGATGACACACCC...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTCTGTCGCGGCGCTCCTaGAGCTGGCTCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: QRGGRPQALRLGLDLAALLSRRS*SWLSMV
Trigger: GACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAG...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCTCCCAGGCTCCCGGGCCCCGTCCCCGGCATCTCCACGCCACTGTCATTGTTGGTGCTGTGGAAGCGCTaGACCCGCGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SPRLPGPVPGISTPLSLLVLWKR*TRGRDR
Trigger: CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCAC...CAACAATGACAGTGGCGTGGAGATGCCGGGGACGGGGCCCGGGAGCCTGGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGTAGTCGTGGAGATGGGGTGCGCTGGCAGCGCCCCCGCTCTGCATCAGCAGGTCCAGGGCCAGCCGGGTaGGGGGAAAGCCGGATCAAG +
Preference number: 4 (lower is better)
Translates to: GSRGDGVRWQRPRSASAGPGPAG*GESRIK
Trigger: CTTGATCCGGCTTTCCCCGCACCCGGCTGGCCCTGG...ACCTGCTGATGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGACTACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR GCA 90 bp GGCTCAGGCGGGGCGTCACCCGCGGGCTGGAGAAACGGGACACGTCCACGGGGTTGGAGAGCGTGGGGCTaGTGTGCACAGAACGGAGGT +
Preference number: 4 (lower is better)
Translates to: GSGGASPAGWRNGTRPRGWRAWG*CAQNGG
Trigger: ACCTCCGTTCTGTGCACAGCAGCCCCACGCTCTCCA...ACCCCGTGGACGTGTCCCGTTTCTCCAGCCCGCGGGTGACGCCCCGCCTGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR GCA 90 bp CGCTGGCCGTGCAGCCCCGGGCTGGGTAGTCTGGGGTTGTCAGAGAAGCCAGTGCCAGACACCTGGCCCTaGGTCAGCGCCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RWPCSPGLGSLGLSEKPVPDTWP*VSARGE
Trigger: CTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG...CACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000445186.5
CDS-3UTR CCA 90 bp ACAGCGCCCGCTTGCGGCTCAGGCGGGGCGTCACCCGCGGGCTGGAGAAACGGGAAGGTGGGTGAGGGCTaGATCAGGGGTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: TAPACGSGGASPAGWRNGKVGEG*IRGGVC
Trigger: ACACACACCACCCCTGATCCAGCCCTCACCCACCTT...CCCGTTTCTCCAGCCCGCGGGTGACGCCCCGCCTGAGCCGCAAGCGGGCGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CCA 90 bp AGGGCATCGGGCCGCCGCACAGGGTCGCTGGCCCGCCTGGCTCCGCCGCCTGGATCTCTTGGTGCAGCCTaGGATCTTGCAGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: RASGRRTGSLARLAPPPGSLGAA*DLADVG
Trigger: CCCTACATCTGCAAGATCCCAGGCTGCACCAAGAGA...TCCAGGCGGCGGAGCCAGGCGGGCCAGCGACCCTGTGCGGCGGCCCGATGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCGGCCTCGGTGCTCTCTaGGCCGCCAGGCTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGGLGAL*AARLRA
Trigger: GGCACGGAGCCTGGCGGCCCAGAGAGCACCGAGGCC...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCACTGGGCCCCGGGGCTaGACTGACACAGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VHVVGAVEALHPRQGQGITGPRG*TDTARS
Trigger: GCTCCGGGCTGTGTCAGTCCAGCCCCGGGGCCCAGT...GATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGGCAGCTGGCTCAGCATaGTCACCTCGCTCGCGGACA +
Preference number: 4 (lower is better)
Translates to: PGGEAAWCSACVESARPMAAGSA*SPRSRT
Trigger: TGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGC...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCTGAGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTCGGCGCTCCTGCAGCTaGCTCAGCATGGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: PEAGPRVHPHSSRPQSIPRRSCS*LSMVTS
Trigger: CGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCG...AGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCCTGGCTCCGCCGCCTaGAGCCTCGTGGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTPGSAA*SLVGEG
Trigger: GCCTTCCCCCACGAGGCTCCAGGCGGCGGAGCCAGG...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCCCTGGCTCCGCCGCCTaGAGCCTCGTGGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCPGSAA*SLVGEG
Trigger: GCCTTCCCCCACGAGGCTCCAGGCGGCGGAGCCAGG...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCCCTGGCTCCGCCGCCTaGAGCCTCGTGGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: MEPLPGRGGSLVFRVCGVPGSAA*SLVGEG
Trigger: GCCTTCCCCCACGAGGCTCCAGGCGGCGGAGCCAGG...GACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGCCACCATCCTGCGCTaGCCGTGCAGCCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGATILR*PCSPGL
Trigger: CAGCCCGGGGCTGCACGGCCAGCGCAGGATGGTGGC...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCGCCACCATCCTGCGCTaGCCGTGCAGCCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGATILR*PCSPGL
Trigger: CAGCCCGGGGCTGCACGGCCAGCGCAGGATGGTGGC...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGGAGGGGCCCACGTTaGAGTCCGCAGCCACCATCC +
Preference number: 4 (lower is better)
Translates to: AFRGIHLPGALVQSATGVRRGPR*SPQPPS
Trigger: GGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCG...CACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GCTCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTGCCCCAAAGCCTAACTaGCATCCTCCCAGCATAGGG +
Preference number: 4 (lower is better)
Translates to: APASAPEGRPAAGPQARSAPKPN*HPPSIG
Trigger: CCCTATGCTGGGAGGATGCCAGTTAGGCTTTGGGGC...AGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000452692.5
CDS-3UTR CCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACCCTGGGGATGCCCTaGGAGGGGGCTCCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCTLGMP*EGAPLR
Trigger: CCGCAGCGGAGCCCCCTCCCAGGGCATCCCCAGGGT...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp CCTGAGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTGGGCAGGCAGAAGGCTaGGGACCTGGTGGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: PEAGPRVHPHSSRPQSIPGQAEG*GPGGSP
Trigger: AGGGCTACCACCAGGTCCCCAGCCTTCTGCCTGCCC...AGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CCTGAGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTCCATGGCATGGCCTGTaGCCCTGGCGTAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PEAGPRVHPHSSRPQSIPPWHGL*PWRRPA
Trigger: AGCTGGCCTACGCCAGGGCCACAGGCCATGCCATGG...AGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCGGCCTGTGGCTGTGGTaGCTGGGACCGCATGACCTG +
Preference number: 4 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGGLWLW*LGPHDL
Trigger: CAGGTCATGCGGTCCCAGCCACCACAGCCACAGGCC...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCGGAATCCCCAGGCTCTaGGCAGCGATGACCCCTCCG +
Preference number: 4 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGGIPRL*AAMTPP
Trigger: CGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCC...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCGGAATCCCCAGGCTCTaGGCAGCGATGACCCCTCCG +
Preference number: 4 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSGIPRL*AAMTPP
Trigger: CGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCC...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTCTGAGAGTGGGGAGATaGACAGCGCCCGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: QRGGRPQALRLGLDLAALLRVGR*TAPACG
Trigger: GCCGCAAGCGGGCGCTGTCCATCTCCCCACTCTCAG...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CCA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGGGTTCACGTACGGGTaGGGGGCGTTGAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: QRGGRPQALRLGLDLAALGFTYG*GALKGD
Trigger: GTCCCCCTTCAACGCCCCCCACCCGTACGTGAACCC...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR TCA 90 bp GGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCTGTCCCCATTCTCTTTaGGCAGCGGTGTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: GSGPGFTLWVLWKRCTRGCPHSL*AAVCGG
Trigger: ACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACA...GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGGTGTAGGCCGAGCTaGCCGTGCTGGTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: AGGAVAALLQLAQHGHLARCRPS*PCWWSC
Trigger: ACAGCTCCACCAGCACGGTCAGCTCGGCCTACACCG...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CATAGGGGCGGAGGGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCCACTGGCGTGCGCCTTaGTGTACTGCACCACGTCGT +
Preference number: 4 (lower is better)
Translates to: HRGGGAHVGVRSHHPALAHWRAP*CTAPRR
Trigger: ACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTG...GGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp AGTCGTGGAGATGGGGTGCGCTGGCAGCGCCCCCGCTCTGCATCAGCAGGTCCCGTCCAGGCTGGCGTCTaGGAGTGGGGAGATGGACAG +
Preference number: 4 (lower is better)
Translates to: SRGDGVRWQRPRSASAGPVQAGV*EWGDGQ
Trigger: CTGTCCATCTCCCCACTCTCAGACGCCAGCCTGGAC...GGGACCTGCTGATGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR TCA 90 bp CAGGGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCAAGGGCACACCCACATaGGCCGTGTCCAGACACCTG +
Preference number: 4 (lower is better)
Translates to: QGGSGPGFTLWVLWKRCTKGTPT*AVSRHL
Trigger: CAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTT...GGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000445186.5
CDS-3UTR GCA 90 bp CACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTGTCCCGCGTGCAGGCCTaGCAGCGGCACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: HLPGALVQSATGVRLDVLSRVQA*QRHTNS
Trigger: GGAGTTTGTGTGCCGCTGGCAGGCCTGCACGCGGGA...CAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTTGGGTGCGATTCTGGTaGTTGGCGCGGTCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: QLAQHGHLARGQLRQPRVWVRFW*LARSEA
Trigger: CGCCTCGGACCGCGCCAAGCACCAGAATCGCACCCA...AACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTTGGGTGCGATTCTGGTaGTTGGCGCGGTCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPWVRFW*LARSEA
Trigger: CGCCTCGGACCGCGCCAAGCACCAGAATCGCACCCA...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGGCCGCCAGGCTCCGTaGCGGCCTCACTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGGRQAP*RPHCPH
Trigger: ATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCC...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGGCCGCCAGGCTCCGTaGCGGCCTCACTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PQALRLGLDLAALVNGDRGRQAP*RPHCPH
Trigger: ATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCC...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGAGGAGAGGGCTCGCTaGTGCAGGACGACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: VHVVGAVEALHPRQGQGIEERAR*CRTTGP
Trigger: GGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTCCTC...GATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGGGGTGTGTCATCCAGTaGCGTCAGGTCTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGGEAAWCSACVESARPMGCVIQ*RQVSQA
Trigger: AGCCTGGGAGACCTGACGGCACTGGATGACACACCC...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGTGGTGGTCATGTGTTTaGGCAGCTGGAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: RQRGGRPQALRLGLDLAAWWSCV*AAGGHQ
Trigger: CTGGTGGCCTCCAGCTGCGCAAACACATGACCACCA...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAGGGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCGGTTCACGTTGTGGGTaGTGTGGAAGCGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: QGGSGPGFTLWVLWKRCTGSRCG*CGSAAP
Trigger: GGGTGCAGCGCTTCCACAGCACCCACAACGTGAACC...GGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CATAGGGGCGGAGGGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCGGTTCACGTTGTGGGTaGTGTGGAAGCGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: HRGGGAHVGVRSHHPALAGSRCG*CGSAAP
Trigger: GGGTGCAGCGCTTCCACAGCACCCACAACGTGAACC...GGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGCTGGCCGTGCAGCCCCGGGCTGGGTAGTCTGGGGTTGTCAGAGAAGCCAGTGGATACACCTGCCCGGTaGCCTCGTCCAGAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: RWPCSPGLGSLGLSEKPVDTPAR*PRPERH
Trigger: GTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATC...CACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GCTGGACTGACACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCACCGCAGCCACCATCCTaGGCTGGCCGTGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: AGLTQPGALGLDGSDVQAPQPPS*AGRAAP
Trigger: CGGGGCTGCACGGCCAGCGCAGGATGGTGGCTGCGG...TGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTGTCAGTCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAGGACACTGGCTGCCTaGCACTGGCTGTCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GEAAWCSACVESARPMSRRTLAA*HWLSQL
Trigger: CAGCTGCGACAGCCAGTGGCAGGCAGCCAGTGTCCT...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp TCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGGGCGGCGCTTGGCTGGCATGTTaGTGCAGGATTGGGGGAACT +
Preference number: 4 (lower is better)
Translates to: SVLGWLCRRRPRLSAQGGAWLAC*CRIGGT
Trigger: AGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGC...GCCGCCCTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGCGTGGTGGGGTCAGGTaGCACTTCTGTCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PGGEAAWCSACVESARPMRGGVR*HFCLLR
Trigger: CCTCAGCAGACAGAAGTGGCACCTGACCCCACCACG...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGGATGACCCCTCCGGGTaGACTCAGCACCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: AFRGIHLPGALVQSATGVDDPSG*TQHQAL
Trigger: GAGCGCCTGGTGCTGAGTGCACCCGGAGGGGTCATC...CACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTCGTGGAGATGGGGTaGGCTGGCAGCGCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: PQALRLGLDLAALVNGDRVVEMG*AGSAPA
Trigger: AGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGAC...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGAGCCGCTCATCGTCCTaGGTGGCAATCCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQSRSSS*VAILAL
Trigger: AAGAGCAAGGATTGCCACCCAGGACGATGAGCGGCT...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGTAGTCGTGGAGATGGGGTGCGCTGGCAGCGCCCCCGCTCTGCATCAGCAGGTAGGGCCATGGGCTGCTaGGCCAGGAAGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GSRGDGVRWQRPRSASAGRAMGC*ARKVGE
Trigger: CTCACCCACCTTCCTGGCCCAGCAGCCCATGGCCCT...ACCTGCTGATGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGACTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CCA 90 bp GTCGTGGAGATGGGGTGCGCTGGCAGCGCCCCCGCTCTGCATCAGCAGGTCCCCCTGCTGCTGCTGAGCTaGGTGGGCGTGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: VVEMGCAGSAPALHQQVPLLLLS*VGVALM
Trigger: CATCAATGCCACGCCCACCCAGCTCAGCAGCAGCAG...GGGGACCTGCTGATGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CCA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTCGCGGTCCGAGGCGTTaGAGAAGGCTTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QRQRGGRPQALRLGLDLARGPRR*RRLCCS
Trigger: GCTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCG...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CGCGCCGTCCACTCCTGCCGCCACGGCCTCCATCGCCACGTTCTCGCTGATGCTTGCGATTCTGGTGCTTaGCGCGGTCCGAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: RAVHSCRHGLHRHVLADACDSGA*RGPRRW
Trigger: CCAACGCCTCGGACCGCGCCAAGCACCAGAATCGCA...AGCATCAGCGAGAACGTGGCGATGGAGGCCGTGGCGGCAGGAGTGGACGGCGCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTTGAGCAGCCCGGAGCCGCCGCTGCACTGGCTGGCCTCGCTCGAGCGCCGCGAGCTCGAACCGGTGCATaGTGGTCATGTGTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: VEQPGAAAALAGLARAPRARTGA*WSCVCA
Trigger: TGCGCAAACACATGACCACCATGCACCGGTTCGAGC...TCGCGGCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTCCGGGCTGCTCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCGCAGCTGGCTCAGCATaGTCACCTCGCTCGCGGACA +
Preference number: 4 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGAAGSA*SPRSRT
Trigger: TGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGC...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCCCTGGCTCCGCCGCCTaGAGCCTCGTGGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSPGSAA*SLVGEG
Trigger: GCCTTCCCCCACGAGGCTCCAGGCGGCGGAGCCAGG...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGGAGAGGGGAAGGGCACACCCACATGAGCCGTGTCCAGACACCTGGCCCTGCGACGTTGTGGGTGCTGTaGAAGCGCTGCACCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GRGEGHTHMSRVQTPGPATLWVL*KRCTRG
Trigger: GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGT...CGCAGGGCCAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTTCCCCTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000445186.5
CDS-3UTR CCA 90 bp CATAGGGGCGGAGGGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCCCGGGCTGGGTAGTCTaGGGTTGTCAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HRGGGAHVGVRSHHPALAPGWVV*GCQRSQ
Trigger: CTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGG...GGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGACCCCAAGTTCCCTGTaGCGATTGCCCATCGTGGTG +
Preference number: 4 (lower is better)
Translates to: RQRGGRPQALRLGLDLAATPSSL*RLPIVV
Trigger: CACCACGATGGGCAATCGCCACAGGGAACTTGGGGT...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCTGGACTGGGTGAGGTaGTGGCACTCCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSLDWVR*WHSSQG
Trigger: GCCCTGGCTGGAGTGCCACCACCTCACCCAGTCCAG...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGCACGTACCCCACGGTaGCGGCCAGTGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSARTPR*RPVGLG
Trigger: GCCCAGCCCCACTGGCCGCCACCGTGGGGTACGTGC...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCTCCTGCGGAGGCGGCTaGGGAGGCACCGACCCCATG +
Preference number: 4 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCSCGGG*GGTDPM
Trigger: CATGGGGTCGGTGCCTCCCCAGCCGCCTCCGCAGGA...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCGGCTGTGGAGGAGGCTaGGGCTCAGAGCACCCGAGA +
Preference number: 4 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSGCGGG*GSEHPR
Trigger: TCTCGGGTGCTCTGAGCCCCAGCCTCCTCCACAGCC...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CCCATCGGGCCTGTTTGGGGCTCCATGAAGCCAGGCTGGCGGGCAGGCAGAAGGGGCTGTGGAGGAGGCTaGGGCTCAGAGCACCCGAGA +
Preference number: 4 (lower is better)
Translates to: PIGPVWGSMKPGWRAGRRGCGGG*GSEHPR
Trigger: TCTCGGGTGCTCTGAGCCCCAGCCTCCTCCACAGCC...CCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCCGTGTCCAGACACCTaGCCCTGCGTCAGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSPCPDT*PCVSAR
Trigger: TCTGGCGCTGACGCAGGGCCAGGTGTCTGGACACGG...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
3UTR CAA 72 bp TCCAGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTaGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SRMEPLPGRGGS*VFRVCGVGPAH
Trigger: ATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CAA 72 bp TCCTGCGGAGGCGGCTGGGGAGGCACCGACCCCATGTaGCCCATCGCTCCCTTGGGCACAGCCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SCGGGWGGTDPM*PIAPLGTASAV
Trigger: AACAGCAGAGGCTGTGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCCTCCCCAGCCGCCTCCGCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp GGGAGAGGGGAAGGGCACACCCACATGAGCCGTGTCCAGACACCTGGCCCTGCGCTCGGAGGCAGTGGCTaGGGCAGACGTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: GRGEGHTHMSRVQTPGPALGGSG*GRRLHL
Trigger: GAGATGGAGACGTCTGCCTCAGCCACTGCCTCCGAG...CGCAGGGCCAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTTCCCCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR TCA 90 bp GAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCCGGTGTAGGCCGAGCTaGCCGTGCTGGTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: EASAFRGIHLPGALVQSARCRPS*PCWWSC
Trigger: ACAGCTCCACCAGCACGGTCAGCTCGGCCTACACCG...GGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTGGCTGGGACCGCATaGCCTGGCAGCTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: PQALRLGLDLAALVNGDRVAGTA*PGSSRG
Trigger: ACCTCGGGAGCTGCCAGGTCATGCGGTCCCAGCCAC...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp AGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGGGCTCTGGGCAGCGATaGCCCCTCCGGGTGCACTCA +
Preference number: 4 (lower is better)
Translates to: RLRAGLTVPILFEQRCAEGSGQR*PLRVHS
Trigger: TGAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCC...CTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GGCCGTAGTAGTAGAGCATGCTGTGGTCCGGGGCCCCACCTGCGTCCTGCGGAGGCCGAATGTCAGCCGTaGAGAAGCCGGAACAGCGCG +
Preference number: 4 (lower is better)
Translates to: GRSSRACCGPGPHLRPAEAECQP*RSRNSA
Trigger: CGCGCTGTTCCGGCTTCTTCACGGCTGACATTCGGC...CTCCGCAGGACGCAGGTGGGGCCCCGGACCACAGCATGCTCTACTACTACGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp ACAGCGCCCGCTTGCGGCTCAGGCGGGGCGTCACCCGCGGGCTGGAGAAACGGGTGCTTCGGGAGTTGTTaGTGTAGGCCACTAGCGAGT +
Preference number: 4 (lower is better)
Translates to: TAPACGSGGASPAGWRNGCFGSC*CRPLAS
Trigger: ACTCGCTAGTGGCCTACATCAACAACTCCCGAAGCA...CCCGTTTCTCCAGCCCGCGGGTGACGCCCCGCCTGAGCCGCAAGCGGGCGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR GCA 90 bp GGTAGTCGTGGAGATGGGGTGCGCTGGCAGCGCCCCCGCTCTGCATCAGCAGGTCGCTGCTGCTGCCGCTaGAGCCACCACCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSRGDGVRWQRPRSASAGRCCCR*SHHQRR
Trigger: TCTCCTTTGGTGGTGGCTGCAGCGGCAGCAGCAGCG...ACCTGCTGATGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGACTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR GCA 90 bp CGGGCTGGAGAAACGGGACACGTCCACGGGGTTGAGGTAGTCGTGGAGATGGGGGGCAGCTACCGCTGCTaGTGCCGCTGCAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: RAGETGHVHGVEVVVEMGGSYRC*CRCSHH
Trigger: GTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCC...CCCCATCTCCACGACTACCTCAACCCCGTGGACGTGTCCCGTTTCTCCAGCCCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR GCA 90 bp GTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCTTGGGCAGCTACCGCTaGTGCTGCCGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VHVVGAVEALHPRQGQGILGSYR*CCRCSH
Trigger: GTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCCCAA...GATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACAGCGCCCGCTTGCGGCTCAGGCGGGGCGTCACCCGCGGGCTGGAGAAACGGGGCCGACTCACTGCTCTaGTTGTTCTGGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TAPACGSGGASPAGWRNGADSLL*LFWLVS
Trigger: TGACACCAACCAGAACAAGCAGAGCAGTGAGTCGGC...CCCGTTTCTCCAGCCCGCGGGTGACGCCCCGCCTGAGCCGCAAGCGGGCGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR GCA 90 bp GCTCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTGCCGACTCACTGCTCTaGTTGTTCTGGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: APASAPEGRPAAGPQARSADSLL*LFWLVS
Trigger: TGACACCAACCAGAACAAGCAGAGCAGTGAGTCGGC...AGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000452692.5
CDS-3UTR GCA 90 bp AGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGGCTTCTGCTCCCGCGTaGAGGCCTGCCAGCGGCACA +
Preference number: 4 (lower is better)
Translates to: RLRAGLTVPILFEQRCAEASAPA*RPASGT
Trigger: TGTGCCGCTGGCAGGCCTGCACGCGGGAGCAGAAGC...CTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAGCGGTGTGCGGAGGTaGACGTCATTGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GEAAWCSACVESARPMSRSGVRR*TSLRCF
Trigger: GAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCCCTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCATGCTGCTGGCCTCGGTaGTCTCTGGGCCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PLRVHSAPGARASRSSCSCCWPR*SLGRQA
Trigger: AGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCA...TGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTTGCTGCTGGCCTCGGTaGTCTCTGGGCCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTCCWPR*SLGRQA
Trigger: AGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCA...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGAGGAGAGGGCTCGCTaGTGCAGGACGACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: MEPLPGRGGSLVFRVCGVEERAR*CRTTGP
Trigger: GGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTCCTC...GACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACTCACTGCTCTGCTTGGGGCCGCCAGTGGCTaGCGCGTACTTGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VNGDRVDGAADGRLTALLGAASG*RVLGPQ
Trigger: CTGCGGGCCAAGTACGCGGCAGCCACTGGCGGCCCC...AAGCAGAGCAGTGAGTCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGTGGTCCGCAGGCTCATaGGCTCCAGGCCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLWSAGS*APGPAA
Trigger: CGCTGCCGGGCCTGGAGCGCATGAGCCTGCGGACCA...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCGGTTCACGTTGTGGGTaGTGTGGAAGCGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGGSRCG*CGSAAP
Trigger: GGGTGCAGCGCTTCCACAGCACCCACAACGTGAACC...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGTGCTCGGGTGGCTCTaGAGGCGGAGGCCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSVLGWL*RRRPRL
Trigger: CAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCAC...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGCAGCTCCCGAGGTTCTCCAGGCCTCCATCCTGTTCGTACATGTGGATCTGGCCCAGGCCGCCGTCGGTaGTCGGGTGGCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSSRGSPGLHPVRTCGSGPGRRR*SGGSAG
Trigger: GCCTGCAGAGCCACCCGAGCACCGACGGCGGCCTGG...GCCAGATCCACATGTACGAACAGGATGGAGGCCTGGAGAACCTCGGGAGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp TGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCCGTGCGCCTTGATGTACTaGACCACGTCGTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: WSPRSRTAPTAAGSAAAPCALMY*TTSSGS
Trigger: GCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCA...CGGGGCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCAGAGCGCCACTGGCGTaGGCCTTGATGTACTGCACC +
Preference number: 4 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSRAPLA*ALMYCT
Trigger: GGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTATCCTGCGCTGGCCGTaGAGCCCCGGGCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTILRWP*SPGLGS
Trigger: ACTACCCAGCCCGGGGCTGCACGGCCAGCGCAGGAT...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTGCACCACCGCCAGGTTaGCCTGAGGAAAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QLAQHGHLARGQLRQPRVAPPPG*PEERVE
Trigger: CTCCACCCTTTCCTCAGGGCAACCTGGCGGTGGTGC...AACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCGCTCCGCTGCGGGGCTaGAGGTGTGGCTGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: RAPLACALMYCTTSSGSTAPLRG*RCGCVL
Trigger: CAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGC...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCTGCCAGGACACTGGCTaGCTGCCACTGGCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSCQDTG*LPLAVA
Trigger: TGCGACAGCCAGTGGCAGGCAGCCAGTGTCCTGGCA...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTCTTGGGCACAGCCTCTaGTGTTTCCTGACTGGACGG +
Preference number: 4 (lower is better)
Translates to: QRQRGGRPQALRLGLDLALGHSL*CFLTGR
Trigger: CCGTCCAGTCAGGAAACAGCAGAGGCTGTGCCCAAG...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCGCTGGGGGACCGGGCTaGCGTCAGGCCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCAGGPG*RQALEF
Trigger: AAACTCCAGGGCCTGACGGCAGCCCGGTCCCCCAGC...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GCTCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTCCAGGATCCCACTTTTaGCTTCTTGCTTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: APASAPEGRPAAGPQARSPGSHF*LLASRR
Trigger: CCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGG...AGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTGGGGAAGGTGAAGGCTaGGCTCCTTGGGCAGCTACC +
Preference number: 4 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPGEGEG*APWAAT
Trigger: GGTAGCTGCCCAAGGAGCCCAGCCTTCACCTTCCCC...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GAGGCGGCTGGGGAGGCACCGACCCCATGTTGCCCATCGCTCCCTTGGGCACAGCTGCTGCTGCTGAGCTaGGTGGGCGTGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: EAAGEAPTPCCPSLPWAQLLLLS*VGVALM
Trigger: CATCAATGCCACGCCCACCCAGCTCAGCAGCAGCAG...CTGTGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCCTCCCCAGCCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTTGCGATTCTGGTGCTTaGCGCGGTCCGAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: QLAQHGHLARGQLRQPRVCDSGA*RGPRRW
Trigger: CCAACGCCTCGGACCGCGCCAAGCACCAGAATCGCA...AACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGACTGGGCCCCGGGGCTaGACTGACACAGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLTGPRG*TDTARS
Trigger: GCTCCGGGCTGTGTCAGTCCAGCCCCGGGGCCCAGT...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTAACCGGAGGGGAGGCAGCTTaGTGTTCCGCGTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RLGPGCTLTPRGLSPSLTGGEAA*CSACVE
Trigger: CTCCACACACGCGGAACACCAAGCTGCCTCCCCTCC...GGTTAGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACTCACTGCTCTGCTTGAGCCGCCGCTGCACTaGCTGGCCTCGCTCGAGCGC +
Preference number: 4 (lower is better)
Translates to: VNGDRVDGAADGRLTALLEPPLH*LASLER
Trigger: GCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTC...AAGCAGAGCAGTGAGTCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCCGGGGTTCACGTTGTaGGTGCTGTGGAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSPGFTL*VLWKRC
Trigger: GCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTCTGCACCACGTCGTCTaGAAGCACCAGGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: QRGGRPQALRLGLDLAALLHHVV*KHQVVL
Trigger: GAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAG...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCGGGCAGGCAGAAGGCTaGGGACCTGGTGGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: EASAFRGIHLPGALVQSAGQAEG*GPGGSP
Trigger: AGGGCTACCACCAGGTCCCCAGCCTTCTGCCTGCCC...GGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCAGGCAGAAGGCTaGGGACCTGGTGGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: VHVVGAVEALHPRQGQGIGQAEG*GPGGSP
Trigger: AGGGCTACCACCAGGTCCCCAGCCTTCTGCCTGCCC...GATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp TCTCCCAGGCTCCCGGGCCCCGTCCCCGGCATCTCCACGCCACTGTCATTGTTGCCTGACTGGACGGCATaGCAGCCATGGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: SPRLPGPVPGISTPLSLLPDWTA*QPWHGL
Trigger: CAGGCCATGCCATGGCTGCCATGCCGTCCAGTCAGG...CAACAATGACAGTGGCGTGGAGATGCCGGGGACGGGGCCCGGGAGCCTGGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCGGGGCCTCCAGGAGCTaGGAGTCCACAGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: EASAFRGIHLPGALVQSAGASRS*ESTVLD
Trigger: GTCCAGCACTGTGGACTCCCAGCTCCTGGAGGCCCC...GGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CAA 72 bp CCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTaGATGTACTGCACCACGTCGTCTGGAAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PVPSSRAPLACA*MYCTTSSGSTR
Trigger: CCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp AGTCGTGGAGATGGGGTGCGCTGGCAGCGCCCCCGCTCTGCATCAGCAGGTCCCACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACG +
Preference number: 4 (lower is better)
Translates to: SRGDGVRWQRPRSASAGPTLLRL*MATGLT
Trigger: CGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGT...GGGACCTGCTGATGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR TCA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTCCTCAGGCTCGGTCTTaGCCTTGCTGCGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: QRGGRPQALRLGLDLAALPQARS*PCCACE
Trigger: TTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGG...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGTGTCCCCATTCTCTTTaGGCAGCGGTGTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRCPHSL*AAVCGG
Trigger: ACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACA...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTTGTCCCCATTCTCTTTaGGCAGCGGTGTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: QRGGRPQALRLGLDLAALCPHSL*AAVCGG
Trigger: ACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACA...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCACTGGCGTGCGCCTTaGTGTACTGCACCACGTCGT +
Preference number: 4 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPHWRAP*CTAPRR
Trigger: ACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTG...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGGTGGCTGGGACCGCATaGCCTGGCAGCTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLVAGTA*PGSSRG
Trigger: ACCTCGGGAGCTGCCAGGTCATGCGGTCCCAGCCAC...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp ATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCCCTCGGCGAGGCTGGTaGGCATGGAGCTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: MEPLPGRGGSLVFRVCGVPRRGW*AWSSCP
Trigger: GGGACATGAGCTCCATGCTCACCAGCCTCGCCGAGG...GACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CCCATCGGGCCTGTTTGGGGCTCCATGAAGCCAGGCTGGCGGGCAGGCAGAAGGAAGGGCACACCCACATaGGCCGTGTCCAGACACCTG +
Preference number: 4 (lower is better)
Translates to: PIGPVWGSMKPGWRAGRRKGTPT*AVSRHL
Trigger: CAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTT...CCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445186.5
CDS-3UTR GCA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGCAGCTACCGCTGCTaGTGCCGCTGCAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSGSYRC*CRCSHH
Trigger: GTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCC...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGGGCTGGAGAAACGGGACACGTCCACGGGGTTGAGGTAGTCGTGGAGATGGGGTTGGGCAGCTACCGCTaGTGCTGCCGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RAGETGHVHGVEVVVEMGLGSYR*CCRCSH
Trigger: GTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCCCAA...CCCCATCTCCACGACTACCTCAACCCCGTGGACGTGTCCCGTTTCTCCAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR GCA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTGAGGGCCATGGGCTaGTGGGCCAGGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PQALRLGLDLAALVNGDRVRAMG*WARKVG
Trigger: ACCCACCTTCCTGGCCCAGCAGCCCATGGCCCTCAC...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCCCTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAGTGAGGGCCATGGGCTaGTGGGCCAGGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PLRVHSAPGARASRSSCSVRAMG*WARKVG
Trigger: ACCCACCTTCCTGGCCCAGCAGCCCATGGCCCTCAC...TGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCTCAGCCAGCTGCTCCTaGGTCAGCGCCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCSASCS*VSARGE
Trigger: CTCCCCTCTGGCGCTGACGCAGGAGCAGCTGGCTGA...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000452692.5
CDS-3UTR GCA 90 bp GTAGGCCTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCAGCTTCTGCTCCCGCGTaGAGGCCTGCCAGCGGCACA +
Preference number: 4 (lower is better)
Translates to: VGLADCSPGTGQRQASAAASAPA*RPASGT
Trigger: TGTGCCGCTGGCAGGCCTGCACGCGGGAGCAGAAGC...TGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAGGCCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCGCCTTGAAGGGCTTCTaGTCCCGCGTGCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCALKGF*SRVQAC
Trigger: GCAGGCCTGCACGCGGGAGCAGAAGCCCTTCAAGGC...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCAGACACCTGGCCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCATGCAGCCTGGGATCTTaGAGATGTAGGGTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: PDTWPCVSARGEAGRRPSCSLGS*RCRVSR
Trigger: ACGAGAAACCCTACATCTGCAAGATCCCAGGCTGCA...TGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR GCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGTGGACCGTTTTCACATaGTTCCGGAGAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGGEAAWCSACVESARPMWTVFT*FRRELG
Trigger: CCCCAGCTCTCTCCGGAAGCATGTGAAAACGGTCCA...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGTGCACGTCATTGCGCTaGTTCTTGGTGACGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PGGEAAWCSACVESARPMCTSLR*FLVTWA
Trigger: TGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCA...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTAGCGGTGTGCGGAGGTaGACGTCATTGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPSGVRR*TSLRCF
Trigger: GAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACGGCCTGGCTGGTGCTaGTGGCCTCGGTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: DLAALVNGDRVDGAADGRRPGWC*WPRCSL
Trigger: CAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCG...TCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCCCACGGCCTGGCTGGTaGTGCTGGCCTCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RAPLACALMYCTTSSGSTPRPGW*CWPRCS
Trigger: AGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGG...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCCGAGCTGCTCGAACCGGTaGATGGTGGTCATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: WSPRSRTAPTAAGSAAAPSCSNR*MVVMCL
Trigger: CAAACACATGACCACCATGCACCGGTTCGAGCAGCT...CGGGGCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCTCCAGGCGGGAGTAGGCCTTCGAGCAGCCCTCGAACGTGCACTTGTGGGGCTCTGTCGCGGCGCTCCTaGAGCTGGCTCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: SPGGSRPSSSPRTCTCGALSRRS*SWLSMV
Trigger: GACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAG...AGCCCCACAAGTGCACGTTCGAGGGCTGCTCGAAGGCCTACTCCCGCCTGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTGAGAGCGCCACTGGCGTaGGCCTTGATGTACTGCACC +
Preference number: 4 (lower is better)
Translates to: HLPGALVQSATGVRLDVLRAPLA*ALMYCT
Trigger: GGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT...CAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGCCGCAGCCACCATCCTaGGCTGGCCGTGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: VVWGCQRSQCFPWDTPARPQPPS*AGRAAP
Trigger: CGGGGCTGCACGGCCAGCGCAGGATGGTGGCTGCGG...CCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGAGGCTGGGGCTCAGAGCACCCGAGAACAAACTCGAGTGATCGCCATCATCCAGGGAGGGGGCTCCGCTaGGGGGCTGCAGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GGWGSEHPRTNSSDRHHPGRGLR*GAAGVA
Trigger: AGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCC...TGGATGATGGCGATCACTCGAGTTTGTTCTCGGGTGCTCTGAGCCCCAGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTGTTCCCTGTGGCGATTaGCCATCGTGGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: AGGAVAALLQLAQHGHLAVPCGD*PSWWGQ
Trigger: CTGACCCCACCACGATGGGCAATCGCCACAGGGAAC...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGCTGGCTCATGGAGGCTaGCAGGTGATGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLSVGYTCPVPSSRAPLALAHGG*QVMALL
Trigger: CAGCAGAGCCATCACCTGGCAGCCTCCATGAGCCAG...CGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GGTAGTCGTGGAGATGGGGTGCGCTGGCAGCGCCCCCGCTCTGCATCAGCAGGTGCTGAGGCCCCTGGCTaGAGAGATCATGGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: GSRGDGVRWQRPRSASAGAEAPG*RDHGER
Trigger: ACGCTCTCCATGATCTCTGCAGCCAGGGGCCTCAGC...ACCTGCTGATGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGACTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGGCTCATCGTCCTGGGTaGCAATCCTTGCTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQAHRPG*QSLLFD
Trigger: ATCAAAGAGCAAGGATTGCCACCCAGGACGATGAGC...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCTGCTGCTGCTGAGCTaGGTGGGCGTGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPLLLLS*VGVALM
Trigger: CATCAATGCCACGCCCACCCAGCTCAGCAGCAGCAG...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCGGTCCGAGGCGTTaGAGAAGGCTTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: AFRGIHLPGALVQSATGVRGPRR*RRLCCS
Trigger: GCTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCG...CACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTGGTGACGTGGGCATCTaGGCCGTGGACCGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPGDVGI*AVDRFH
Trigger: GTGAAAACGGTCCACGGCCCAGATGCCCACGTCACC...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCCCTGGCTGGTGCTGCTaGCCTCGGTGCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RAPLACALMYCTTSSGSTPGWCC*PRCSLG
Trigger: GCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGG...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTAGGCCTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACAGTCCTCCACGGCCTaGCTGGTGCTGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VGLADCSPGTGQRQASAAQSSTA*LVLLAS
Trigger: CGAGGCCAGCAGCACCAGCCAGGCCGTGGAGGACTG...TGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAGGCCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp TCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAACTGGGCCCCGGGGCTaGACTGACACAGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SEKPVLSVGYTCPVPSSRTGPRG*TDTARS
Trigger: GCTCCGGGCTGTGTCAGTCCAGCCCCGGGGCCCAGT...TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGCAGCTGGCTCAGCATaGTCACCTCGCTCGCGGACA +
Preference number: 4 (lower is better)
Translates to: VHVVGAVEALHPRQGQGIAAGSA*SPRSRT
Trigger: TGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGC...GATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGACGGCGCTCCTGCAGCTaGCTCAGCATGGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGRRSCS*LSMVTS
Trigger: CGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCG...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCCCTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCACGGCGCTCCTGCAGCTaGCTCAGCATGGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: PLRVHSAPGARASRSSCSRRSCS*LSMVTS
Trigger: CGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCG...TGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTAACCCTGCACCACGTCGTCTaGAAGCACCAGGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: RLGPGCTLTPRGLSPSLTLHHVV*KHQVVL
Trigger: GAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAG...GGTTAGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTGCCGGGCTGGGTAGTCTaGGGTTGTCAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HLPGALVQSATGVRLDVLPGWVV*GCQRSQ
Trigger: CTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGG...CAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCCGGGCTGGGTAGTCTaGGGTTGTCAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: AFRGIHLPGALVQSATGVPGWVV*GCQRSQ
Trigger: CTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGG...CACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGGCCACCATCCTGCGCTaGCCGTGCAGCCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: VVWGCQRSQCFPWDTPARATILR*PCSPGL
Trigger: CAGCCCGGGGCTGCACGGCCAGCGCAGGATGGTGGC...CCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGCGGAGGGGCCCACGTTaGAGTCCGCAGCCACCATCC +
Preference number: 4 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLRRGPR*SPQPPS
Trigger: GGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCG...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGGCCCCAAAGCCTAACTaGCATCCTCCCAGCATAGGG +
Preference number: 4 (lower is better)
Translates to: GEAAWCSACVESARPMSRAPKPN*HPPSIG
Trigger: CCCTATGCTGGGAGGATGCCAGTTAGGCTTTGGGGC...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCTGAGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTACCCCAAGTTCCCTGTaGCGATTGCCCATCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PEAGPRVHPHSSRPQSIPTPSSL*RLPIVV
Trigger: CACCACGATGGGCAATCGCCACAGGGAACTTGGGGT...AGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGCCATGGCATGGCCTGTaGCCCTGGCGTAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RLRAGLTVPILFEQRCAEPWHGL*PWRRPA
Trigger: AGCTGGCCTACGCCAGGGCCACAGGCCATGCCATGG...CTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCGGGGCCTCCAGGAGCTaGGAGTCCACAGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGGASRS*ESTVLD
Trigger: GTCCAGCACTGTGGACTCCCAGCTCCTGGAGGCCCC...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GGTAGTCGTGGAGATGGGGTGCGCTGGCAGCGCCCCCGCTCTGCATCAGCAGGTTCCTTAAGGTGCTCCTaGGCCACATCAGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSRGDGVRWQRPRSASAGSLRCS*ATSAGL
Trigger: CAGCCCCGCTGATGTGGCCCAGGAGCACCTTAAGGA...ACCTGCTGATGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGACTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR CAA 72 bp CCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTaGAGCAGCGGTGTGCGGAGGTGCACGTCATTGCGC +
Preference number: 4 (lower is better)
Translates to: PGSVPASLSPFS*SSGVRRCTSLR
Trigger: GCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CAA 72 bp TTGAGCTGCTCGAACCGGTGCATGGTGGTCATGTGTTaGCGCAGCTGGAGGCCACCAGCGGAGGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSCSNRCMVVMC*RSWRPPAEGAA
Trigger: GGCTGCCCCCTCCGCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAGCTCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGGCATGTACTGCGCCTTaGAGGGCTTCTGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: LADCSPGTGQRQASAAPPACTAP*RASAPA
Trigger: CGCGGGAGCAGAAGCCCTTCAAGGCGCAGTACATGC...CGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp ATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGCATGTACTGCGCCTTaGAGGGCTTCTGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: MEPLPGRGGSLVFRVCGVACTAP*RASAPA
Trigger: CGCGGGAGCAGAAGCCCTTCAAGGCGCAGTACATGC...GACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCTGTCCCCATTCTCTTTaGGCAGCGGTGTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSCPHSL*AAVCGG
Trigger: ACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACA...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp ATGTGCTGGGACGCAGCGAGCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCGCCCCGGGGCTGGACTaGCACAGCCCGGAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: MCWDAASPDDDVGLVLKLAPGLD*HSPELS
Trigger: CGAGAGCTCCGGGCTGTGTCAGTCCAGCCCCGGGGC...GAGTTTGAGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGGCCCCGGGGCTGGACTaGCACAGCCCGGAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLAPGLD*HSPELS
Trigger: CGAGAGCTCCGGGCTGTGTCAGTCCAGCCCCGGGGC...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACGGTGTAGGCCGAGCTaGCCGTGCTGGTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DLAALVNGDRVDGAADGRRCRPS*PCWWSC
Trigger: ACAGCTCCACCAGCACGGTCAGCTCGGCCTACACCG...TCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGTCCTCCACGGGCTGGATGCTGTCCTaGCAGGCCTGTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HSPELSVLMALTCRQSSTGWMLS*QACGCG
Trigger: ACCACAGCCACAGGCCTGTCAGGACAGCATCCAGCC...CGTGGAGGACTGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp GTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCGGCCTCGGCGAGGCTGGTaGGCATGGAGCTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: VRLDVLHHVVWKHQVVLRPRRGW*AWSSCP
Trigger: GGGACATGAGCTCCATGCTCACCAGCCTCGCCGAGG...CCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCACAACATCTGTCATCTaGAGCGGCCATTGCGCAACA +
Preference number: 4 (lower is better)
Translates to: GSGPGFTLWVLWKRCTRGTTSVI*SGHCAT
Trigger: TGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGT...GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGCGCTGCTGCTGCCGCTaGAGCCACCACCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PQALRLGLDLAALVNGDRRCCCR*SHHQRR
Trigger: TCTCCTTTGGTGGTGGCTGCAGCGGCAGCAGCAGCG...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCCGCTGCTGCTGCCGCTaGAGCCACCACCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCRCCCR*SHHQRR
Trigger: TCTCCTTTGGTGGTGGCTGCAGCGGCAGCAGCAGCG...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTTGTCGTACTCCTTGGTaGAGTCTTCCCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: QRQRGGRPQALRLGLDLACRTPW*SLPSGS
Trigger: ACTGCCACTGGGAAGACTGCACCAAGGAGTACGACA...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGTGGACCGTTTTCACATaGTTCCGGAGAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GEAAWCSACVESARPMSRWTVFT*FRRELG
Trigger: CCCCAGCTCTCTCCGGAAGCATGTGAAAACGGTCCA...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGTGCTCTCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTTTGATGGCTCTGACGTaGAGGCAGTCCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GALWAARLRAGLTVPILFLMALT*RQSSTA
Trigger: GGCCGTGGAGGACTGCCTGCACGTCAGAGCCATCAA...AAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGAGAGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGAGAGGGCTCGCTGCTaGAGGACGACTGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GLDLAALVNGDRVDGAADERARC*RTTGPR
Trigger: CCGGGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTC...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGACATTGTTGGGGGCACTaGCCAGAGGAGAGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGHCWGH*PEERAR
Trigger: GCGAGCCCTCTCCTCTGGGCAGTGCCCCCAACAATG...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCCCTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCACATTGTTGGGGGCACTaGCCAGAGGAGAGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: PLRVHSAPGARASRSSCSHCWGH*PEERAR
Trigger: GCGAGCCCTCTCCTCTGGGCAGTGCCCCCAACAATG...TGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCCGCAGGCTGTACTGCTaGGCCGGCGTGAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSRRLYC*AGVRLS
Trigger: GCTCAACCTCACGCCGGCGCAGCAGTACAGCCTGCG...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGATCCGTGGGATACACCTaGCCGGTGCCCTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGSVGYT*PVPSSR
Trigger: TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGA...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTTCCGTGGGATACACCTaGCCGGTGCCCTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTSVGYT*PVPSSR
Trigger: TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGA...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGTCCGTGGGATACACCTaGCCGGTGCCCTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: LADCSPGTGQRQASAAPPSVGYT*PVPSSR
Trigger: TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGA...CGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp CTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGAAGGCAGGCTTCTGCTaGACCACCGCCAGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: LADCSPGTGQRQASAAPPKAGFC*TTARLP
Trigger: GGGCAACCTGGCGGTGGTGCAGCAGAAGCCTGCCTT...CGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCAGCTCCGCTGCGGGGCTaGAGGTGTGGCTGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKAAPLRG*RCGCVL
Trigger: CAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGC...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGTCATGTTCAGGAACTTaGTCTCCTCGGCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRSCSGT*SPRRGW
Trigger: CCAGCCTCGCCGAGGAGAGCAAGTTCCTGAACATGA...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTAGGCCTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCAGATGACCCCTCCGGGTaGACTCAGCACCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: VGLADCSPGTGQRQASAADDPSG*TQHQAL
Trigger: GAGCGCCTGGTGCTGAGTGCACCCGGAGGGGTCATC...TGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAGGCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTGAAGGCTGGGCTCCTTaGGCAGCTACCGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTEGWAP*AATAAA
Trigger: AGCAGCAGCGGTAGCTGCCCAAGGAGCCCAGCCTTC...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGAAGGGCCATGGGCTGCTaGGCCAGGAAGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: DLAALVNGDRVDGAADGRRAMGC*ARKVGE
Trigger: CTCACCCACCTTCCTGGCCCAGCAGCCCATGGCCCT...TCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCCCAGATGCCCTGGCTTGGCTGGCATGTTGCTGCAGGATTGGGGGAACTGGTTCCTGGCTGGTGCTGCTaGCCTCGGTGCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PQMPWLGWHVAAGLGELVPGWCC*PRCSLG
Trigger: GCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGG...AACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCCAGGGCATCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCACTGGGCCCCGGGGCTaGACTGACACAGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFTGPRG*TDTARS
Trigger: GCTCCGGGCTGTGTCAGTCCAGCCCCGGGGCCCAGT...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCTCGAACCGGTGCATaGTGGTCATGTGTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: PGFTLWVLWKRCTRGRDRARTGA*WSCVCA
Trigger: TGCGCAAACACATGACCACCATGCACCGGTTCGAGC...CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGGGAGGGGAGGCAGCTTaGTGTTCCGCGTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RLRAGLTVPILFEQRCAEGGEAA*CSACVE
Trigger: CTCCACACACGCGGAACACCAAGCTGCCTCCCCTCC...CTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TCTCCAGGCGGGAGTAGGCCTTCGAGCAGCCCTCGAACGTGCACTTGTGGGGCTGCAGCTGGCTCAGCATaGTCACCTCGCTCGCGGACA +
Preference number: 4 (lower is better)
Translates to: SPGGSRPSSSPRTCTCGAAAGSA*SPRSRT
Trigger: TGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGC...AGCCCCACAAGTGCACGTTCGAGGGCTGCTCGAAGGCCTACTCCCGCCTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGGCTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTGAGCCGCCGCTGCACTaGCTGGCCTCGCTCGAGCGC +
Preference number: 4 (lower is better)
Translates to: GLPSGPGVFGGKVGGRCIEPPLH*LASLER
Trigger: GCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTC...AATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCCCGGGGTTCACGTTGTaGGTGCTGTGGAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCPGFTL*VLWKRC
Trigger: GCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGGCCCCAAAGCCTAACTaGCATCCTCCCAGCATAGGG +
Preference number: 4 (lower is better)
Translates to: VLSVGYTCPVPSSRAPLAAPKPN*HPPSIG
Trigger: CCCTATGCTGGGAGGATGCCAGTTAGGCTTTGGGGC...CGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCTATTTTTGTTCAGGCTaGAGGGCGCCCCAAAGCCTA +
Preference number: 4 (lower is better)
Translates to: GSGPGFTLWVLWKRCTRGYFCSG*RAPQSL
Trigger: TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATA...GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GAGGCGGCTGGGGAGGCACCGACCCCATGTTGCCCATCGCTCCCTTGGGCACAGATGCCCTGGCTTGGCTaGCATGTTGCTGCAGGATTG +
Preference number: 4 (lower is better)
Translates to: EAAGEAPTPCCPSLPWAQMPWLG*HVAAGL
Trigger: CAATCCTGCAGCAACATGCCAGCCAAGCCAGGGCAT...CTGTGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCCTCCCCAGCCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCCCATCGGGCCTGTTTaGGGCTCCATGAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTPIGPV*GSMKPG
Trigger: GCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGG...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGACCTGACTGGACGGCATaGCAGCCATGGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGPDWTA*QPWHGL
Trigger: CAGGCCATGCCATGGCTGCCATGCCGTCCAGTCAGG...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCTGGGACCGCATGACCTaGCAGCTCCCGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KTAGIPRLWAAMTPPGALWDRMT*QLPRFS
Trigger: GGAGAACCTCGGGAGCTGCCAGGTCATGCGGTCCCA...GAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCACAGGCCTGTGGCTGTaGTGGCTGGGACCGCATGAC +
Preference number: 4 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGTGLWL*WLGPHD
Trigger: GTCATGCGGTCCCAGCCACCACAGCCACAGGCCTGT...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTCAGCTCTACCAAACCTaGAATCAGAATGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EALHPRQGQGIGPPHRVAQLYQT*NQNVLL
Trigger: CAGGAGCACATTCTGATTCCAGGTTTGGTAGAGCTG...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ATGTGCTGGGACGCAGCGAGCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCGCGGCGACCCTCGGCTaGCTGCCTTGTGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: MCWDAASPDDDVGLVLKLAATLG*LPCAGA
Trigger: AGCCCCGGCACAAGGCAGCCAGCCGAGGGTCGCCGC...GAGTTTGAGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACCATCCCACCTTGGCTaGCGCGGCGACCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKAPSHLG*RGDPRL
Trigger: CAGCCGAGGGTCGCCGCGCCAGCCAAGGTGGGATGG...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTAACCAATAGTCTGAGGGGGTaGTGCCTGGAGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RLGPGCTLTPRGLSPSLTNSLRG*CLEQEG
Trigger: GCCTTCCTGCTCCAGGCACCACCCCCTCAGACTATT...GGTTAGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GGCTTGGCTGGCATGTTGCTGCAGGATTGGGGGAACTGGTTGAGGGCCCCACTGCCGTGTCCAGACACCTaGCCCTGCGTCAGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: GLAGMLLQDWGNWLRAPLPCPDT*PCVSAR
Trigger: TCTGGCGCTGACGCAGGGCCAGGTGTCTGGACACGG...CAGTGGGGCCCTCAACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445186.5
CDS-3UTR TCA 90 bp GGCTTGGCTGGCATGTTGCTGCAGGATTGGGGGAACTGGTTGAGGGCCCCACTGCTCGGAGGCAGTGGCTaGGGCAGACGTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: GLAGMLLQDWGNWLRAPLLGGSG*GRRLHL
Trigger: GAGATGGAGACGTCTGCCTCAGCCACTGCCTCCGAG...CAGTGGGGCCCTCAACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp GGTGCTCTCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTCCTCAGGCTCGGTCTTaGCCTTGCTGCGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: GALWAARLRAGLTVPILFPQARS*PCCACE
Trigger: TTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGG...AAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGAGAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCAGTTGGTCTCATAGATaGCCACCTCAGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSSWSHR*PPQPPA
Trigger: AGCAGGAGGCTGAGGTGGTCATCTATGAGACCAACT...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCGCAGGAATCCTTGAGTaGCTTGAGCTTCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GSGPGFTLWVLWKRCTRGAGILE*LELLLL
Trigger: AAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGC...GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GTAGGCCTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCAGCCACTTCTGTCTGCTaGGGGTGCCCCAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: VGLADCSPGTGQRQASAAATSVC*GCPRCP
Trigger: AGGGCATCTGGGGCACCCTCAGCAGACAGAAGTGGC...TGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAGGCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp GCTGGACTGACACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGCCTCTGCTGTTTCCTaGCTGGACGGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AGLTQPGALGLDGSDVQAASAVS*LDGMAA
Trigger: GGCTGCCATGCCGTCCAGTCAGGAAACAGCAGAGGC...TGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTGTCAGTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGATCCCTAGGGCAGCCTaGGGCTGGGCCCCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLIPRAA*GWAPGA
Trigger: TGCACCCGGGGCCCAGCCTCAGGCTGCCCTAGGGAT...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp AGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGAAGGGCACACCCACATaGGCCGTGTCCAGACACCTG +
Preference number: 4 (lower is better)
Translates to: RLRAGLTVPILFEQRCAEKGTPT*AVSRHL
Trigger: CAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTT...CTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR GCA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCACTTTTGGCTTCTTaGTTCTCGGAGGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSPLLAS*FSEAVA
Trigger: AGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGG...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTACCACCTCAGCCTCCTaGTTACAGTCATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPTTSAS*LQSSLS
Trigger: GGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCACCACCTCAGCCTCCTaGTTACAGTCATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSTTSAS*LQSSLS
Trigger: GGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTACCACCTCAGCCTCCTaGTTACAGTCATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QLAQHGHLARGQLRQPRVTTSAS*LQSSLS
Trigger: GGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT...AACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGAGGCTGGGGCTCAGAGCACCCGAGAACAAACTCGAGTGATCGCCATCATCCAGAGGAGAGGGCTCGCTaGTGCAGGACGACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GGWGSEHPRTNSSDRHHPEERAR*CRTTGP
Trigger: GGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTCCTC...TGGATGATGGCGATCACTCGAGTTTGTTCTCGGGTGCTCTGAGCCCCAGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp CTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGACATTGTTGGGGGCACTaGCCAGAGGAGAGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: LEPVHGGHVFAQLEATSGHCWGH*PEERAR
Trigger: GCGAGCCCTCTCCTCTGGGCAGTGCCCCCAACAATG...TCCGCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCTGAGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTAGCTGCTCGAACCGGTaGATGGTGGTCATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PEAGPRVHPHSSRPQSIPSCSNR*MVVMCL
Trigger: CAAACACATGACCACCATGCACCGGTTCGAGCAGCT...AGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGTGCTGTGGAAGCGCTaGACCCGCGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: AVGLVSGQSLMCWDAASPVLWKR*TRGRDR
Trigger: CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCAC...TGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp AAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCCCAAAGGCAGGCTTCTaGTGCACCACCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KTAGIPRLWAAMTPPGALPKAGF*CTTARL
Trigger: CAACCTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGG...GAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp CCCCAAGTTCCCTGTGGCGATTGCCCATCGTGGTGGGGTCAGGTGCCACTTCTGTGCCAGGACACTGGCTaGCTGCCACTGGCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: PQVPCGDCPSWWGQVPLLCQDTG*LPLAVA
Trigger: TGCGACAGCCAGTGGCAGGCAGCCAGTGTCCTGGCA...CAGAAGTGGCACCTGACCCCACCACGATGGGCAATCGCCACAGGGAACTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GGCTTGGCTGGCATGTTGCTGCAGGATTGGGGGAACTGGTTGAGGGCCCCACTGGCACCGACCCCATGTTaGCCATCGCTCCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GLAGMLLQDWGNWLRAPLAPTPC*PSLPWA
Trigger: TGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGC...CAGTGGGGCCCTCAACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp AGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTAACCTCATGTTCAGGAACTTaGTCTCCTCGGCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLGPGCTLTPRGLSPSLTSCSGT*SPRRGW
Trigger: CCAGCCTCGCCGAGGAGAGCAAGTTCCTGAACATGA...GGTTAGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp AGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGGCATCTGATGACCCCTCCGGGTaGACTCAGCACCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: SGVRRCTSLRCFLVTWASDDPSG*TQHQAL
Trigger: GAGCGCCTGGTGCTGAGTGCACCCGGAGGGGTCATC...AGATGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTTCCGCGGAGCCGTGCTaGCTCGGCTGGCAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCSAEPC*LGWQAP
Trigger: CGGCGCTTGCCAGCCGAGGCAGCACGGCTCCGCGGA...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTCGGCTGGCTGCCTTGTaGCGGGGCTCCAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCRLAAL*RGSSQP
Trigger: CGGCTGGCTGGAGCCCCGGCACAAGGCAGCCAGCCG...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GGGCTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTGTCGTGGAGATGGGGTaGGCTGGCAGCGCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: GLPSGPGVFGGKVGGRCIVVEMG*AGSAPA
Trigger: AGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGAC...AATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTCCAGGATCCCACTTTTaGCTTCTTGCTTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: QRGGRPQALRLGLDLAALPGSHF*LLASRR
Trigger: CCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGG...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCAGGATCCCACTTTTaGCTTCTTGCTTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGPGSHF*LLASRR
Trigger: CCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGG...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGGGGGAAGGTGAAGGCTaGGCTCCTTGGGCAGCTACC +
Preference number: 4 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLGEGEG*APWAAT
Trigger: GGTAGCTGCCCAAGGAGCCCAGCCTTCACCTTCCCC...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCCTGCTGCTGCTGAGCTaGGTGGGCGTGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: MEPLPGRGGSLVFRVCGVLLLLS*VGVALM
Trigger: CATCAATGCCACGCCCACCCAGCTCAGCAGCAGCAG...GACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTCTGCTCTGCTTGTTCTaGTTGGTGTCACTCAGACAG +
Preference number: 4 (lower is better)
Translates to: QRQRGGRPQALRLGLDLALLCLF*LVSLRQ
Trigger: CTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAG...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTTCCTTCTTCTCCCCGTaGATGTGCTCGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: QRQRGGRPQALRLGLDLASFFSP*MCSLLM
Trigger: CATCAACAACGAGCACATCCACGGGGAGAAGAAGGA...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACAGTCCTCCACGGCCTaGCTGGTGCTGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKAQSSTA*LVLLAS
Trigger: CGAGGCCAGCAGCACCAGCCAGGCCGTGGAGGACTG...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCCCTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCACTGCACCACGTCGTCTaGAAGCACCAGGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: PLRVHSAPGARASRSSCSLHHVV*KHQVVL
Trigger: GAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAG...TGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCCGGGCTGGGTAGTCTaGGGTTGTCAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTPGWVV*GCQRSQ
Trigger: CTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGG...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGACGTGCAGCCCCGGGCTaGGTAGTCTGGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SEKPVLSVGYTCPVPSSRRAAPG*VVWGCQ
Trigger: CTGACAACCCCAGACTACCCAGCCCGGGGCTGCACG...TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGATGACGATGCCACCATCCTGCGCTaGCCGTGCAGCCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVSGQSLMCWDAASPDDDATILR*PCSPGL
Trigger: CAGCCCGGGGCTGCACGGCCAGCGCAGGATGGTGGC...ATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCGCATGTAGTTTACCCTaGGGATGCCCTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGACSLP*GCPGRG
Trigger: CCCCCTCCCAGGGCATCCCCAGGGTAAACTACATGC...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCGCATGTAGTTTACCCTaGGGATGCCCTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KTAGIPRLWAAMTPPGALACSLP*GCPGRG
Trigger: CCCCCTCCCAGGGCATCCCCAGGGTAAACTACATGC...GAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGGCGATTGCCCATCGTaGTGGGGTCAGGTGCCACTT +
Preference number: 4 (lower is better)
Translates to: PQALRLGLDLAALVNGDRGDCPS*WGQVPL
Trigger: AAGTGGCACCTGACCCCACCACGATGGGCAATCGCC...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCAGGTGGCGATTGCCCATCGTaGTGGGGTCAGGTGCCACTT +
Preference number: 4 (lower is better)
Translates to: DCSPGTGQRQASAAPPPGGDCPS*WGQVPL
Trigger: AAGTGGCACCTGACCCCACCACGATGGGCAATCGCC...ACCTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GGCAGCTCCCGAGGTTCTCCAGGCCTCCATCCTGTTCGTACATGTGGATCTGGCCCATGGCATGGCCTGTaGCCCTGGCGTAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSSRGSPGLHPVRTCGSGPWHGL*PWRRPA
Trigger: AGCTGGCCTACGCCAGGGCCACAGGCCATGCCATGG...GCCAGATCCACATGTACGAACAGGATGGAGGCCTGGAGAACCTCGGGAGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGTCCTGCGGAGGCGGCTaGGGAGGCACCGACCCCATG +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLSCGGG*GGTDPM
Trigger: CATGGGGTCGGTGCCTCCCCAGCCGCCTCCGCAGGA...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp CTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGATGTGGCTGTGGTGGCTaGGACCGCATGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LEPVHGGHVFAQLEATSGCGCGG*DRMTWQ
Trigger: CTGCCAGGTCATGCGGTCCCAGCCACCACAGCCACA...TCCGCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp TTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCACAGTGCTGGACACCTaGTTGACCCCTGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LRTVARVLAKGRLLLHHRTVLDT*LTPGEG
Trigger: GCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGT...GCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGGCATCTGGAATCCCCAGGCTCTaGGCAGCGATGACCCCTCCG +
Preference number: 4 (lower is better)
Translates to: SGVRRCTSLRCFLVTWASGIPRL*AAMTPP
Trigger: CGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCC...AGATGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACG +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTTLLRL*MATGLT
Trigger: CGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGT...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACG +
Preference number: 4 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCTLLRL*MATGLT
Trigger: CGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGT...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp TCTCCCAGGCTCCCGGGCCCCGTCCCCGGCATCTCCACGCCACTGTCATTGTTGAGTTGGTCTCATAGATaGCCACCTCAGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SPRLPGPVPGISTPLSLLSWSHR*PPQPPA
Trigger: AGCAGGAGGCTGAGGTGGTCATCTATGAGACCAACT...CAACAATGACAGTGGCGTGGAGATGCCGGGGACGGGGCCCGGGAGCCTGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CGGTGCCGGAGCTCACCTCATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCGCCCCGGGGCTGGACTaGCACAGCCCGGAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: RCRSSPHSTAQACYFCSGAPGLD*HSPELS
Trigger: CGAGAGCTCCGGGCTGTGTCAGTCCAGCCCCGGGGC...GCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAGCTCCGGCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACCGGTGTAGGCCGAGCTaGCCGTGCTGGTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GLDLAALVNGDRVDGAADRCRPS*PCWWSC
Trigger: ACAGCTCCACCAGCACGGTCAGCTCGGCCTACACCG...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CCCCAGATGCCCTGGCTTGGCTGGCATGTTGCTGCAGGATTGGGGGAACTGGTTACCGCCAGGTTGCCCTaGGGAAAGGGTGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PQMPWLGWHVAAGLGELVTARLP*GKGGGF
Trigger: GAAGCCTCCACCCTTTCCTCAGGGCAACCTGGCGGT...AACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCCAGGGCATCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp AGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGGCATCTGCCACTTCTGTCTGCTaGGGGTGCCCCAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: SGVRRCTSLRCFLVTWASATSVC*GCPRCP
Trigger: AGGGCATCTGGGGCACCCTCAGCAGACAGAAGTGGC...AGATGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp GTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACTCACTGCTCTGCTTTGCTGGACACCTGGTTaGCCCCTGGTGAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: VNGDRVDGAADGRLTALLCWTPG*PLVRAR
Trigger: CCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCA...AAGCAGAGCAGTGAGTCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp CATAGGGGCGGAGGGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCGAGAACAAACTCGAGTaGTCGCCATCATCCATGATG +
Preference number: 4 (lower is better)
Translates to: HRGGGAHVGVRSHHPALAENKLE*SPSSMM
Trigger: CATCATGGATGATGGCGATCACTCGAGTTTGTTCTC...GGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp GCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCACCTCGGCGAGGCTGGTaGGCATGGAGCTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: AVGLVSGQSLMCWDAASPPRRGW*AWSSCP
Trigger: GGGACATGAGCTCCATGCTCACCAGCCTCGCCGAGG...TGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACTCACTGCTCTGCTTCGCTGCTGCTGCCGCTaGAGCCACCACCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VNGDRVDGAADGRLTALLRCCCR*SHHQRR
Trigger: TCTCCTTTGGTGGTGGCTGCAGCGGCAGCAGCAGCG...AAGCAGAGCAGTGAGTCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCAGCCTTGAAGGGCTTCTaGTCCCGCGTGCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKAALKGF*SRVQAC
Trigger: GCAGGCCTGCACGCGGGAGCAGAAGCCCTTCAAGGC...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCTGCAGCCTGGGATCTTaGAGATGTAGGGTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSCSLGS*RCRVSR
Trigger: ACGAGAAACCCTACATCTGCAAGATCCCAGGCTGCA...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTGGACTTGGCCATAGCAGGCATGGGGGCTCATAGTGGTAGTCATGCCAGGACATGCTGCTGGCCTCGGTaGTCTCTGGGCCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VDLAIAGMGAHSGSHARTCCWPR*SLGRQA
Trigger: AGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCA...TGTCCTGGCATGACTACCACTATGAGCCCCCATGCCTGCTATGGCCAAGTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGCCACGGCCTGGCTGGTaGTGCTGGCCTCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLPRPGW*CWPRCS
Trigger: AGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGG...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGTTGATGGCTCTGACGTaGAGGCAGTCCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLLMALT*RQSSTA
Trigger: GGCCGTGGAGGACTGCCTGCACGTCAGAGCCATCAA...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGAGAGGGCTCGCTGCTaGAGGACGACTGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAERARC*RTTGPR
Trigger: CCGGGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTTGGTGGTCATGTGTTTaGGCAGCTGGAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTWWSCV*AAGGHQ
Trigger: CTGGTGGCCTCCAGCTGCGCAAACACATGACCACCA...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGGAGAGGGGAAGGGCACACCCACATGAGCCGTGTCCAGACACCTGGCCCTGCGTTCTCCTTCTTGAGCTaGTCGAACCGGTGCATGGTG +
Preference number: 4 (lower is better)
Translates to: GRGEGHTHMSRVQTPGPAFSFLS*SNRCMV
Trigger: CACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAA...CGCAGGGCCAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTTCCCCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR GCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGCCCGCAGGCTGTACTaGTGCGCCGGCGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLARRLY*CAGVRL
Trigger: CAACCTCACGCCGGCGCAGCAGTACAGCCTGCGGGC...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTTGGTCCGCAGGCTCATaGGCTCCAGGCCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCWSAGS*APGPAA
Trigger: CGCTGCCGGGCCTGGAGCGCATGAGCCTGCGGACCA...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGGTGCTGTGGAAGCGCTaGACCCGCGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLVLWKR*TRGRDR
Trigger: CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCAC...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGTGCTCGGGTGGCTCTaGAGGCGGAGGCCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAVLGWL*RRRPRL
Trigger: CAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCAC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCAGAGCGCCACTGGCGTaGGCCTTGATGTACTGCACC +
Preference number: 4 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSRAPLA*ALMYCT
Trigger: GGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCTACCGCAGCCACCATCCTaGGCTGGCCGTGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: STAQACYFCSGWRAPQSLPQPPS*AGRAAP
Trigger: CGGGGCTGCACGGCCAGCGCAGGATGGTGGCTGCGG...TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGCTCACCTCATTCCACTaGACAGGCATGTTATTTTTG +
Preference number: 4 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQLTSFH*TGMLFL
Trigger: CAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAG...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTCTCACCTCATTCCACTaGACAGGCATGTTATTTTTG +
Preference number: 4 (lower is better)
Translates to: EALHPRQGQGIGPPHRVALTSFH*TGMLFL
Trigger: CAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAG...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GGCAGCTCCCGAGGTTCTCCAGGCCTCCATCCTGTTCGTACATGTGGATCTGGCCCAGGGCGTCTACGGTaGCGGAGCTCACCTCATTCC +
Preference number: 4 (lower is better)
Translates to: GSSRGSPGLHPVRTCGSGPGRLR*RSSPHS
Trigger: GGAATGAGGTGAGCTCCGGCACCGTAGACGCCCTGG...GCCAGATCCACATGTACGAACAGGATGGAGGCCTGGAGAACCTCGGGAGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp AGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGGCATCTGCACCACCGCCAGGTTaGCCTGAGGAAAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SGVRRCTSLRCFLVTWASAPPPG*PEERVE
Trigger: CTCCACCCTTTCCTCAGGGCAACCTGGCGGTGGTGC...AGATGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCGGCGTAGTAGTAGAGCATaGTGTGGTCCGGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: VRLDVLHHVVWKHQVVLRRSSRA*CGPGPH
Trigger: GTGGGGCCCCGGACCACAGCATGCTCTACTACTACG...CCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTAGATTCAAACCCAAATaGTCCCTACCATCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: EALHPRQGQGIGPPHRVARFKPK*SLPSFC
Trigger: GCAGAAAGATGGTAGGGAGCATTTGGGTTTGAATCT...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCAGCTGGACAGCGCCCGCTTaGGGCTCAGGCGGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: SASCLQSSLSRSSLRSASWTAPA*GSGGAS
Trigger: TGACGCCCCGCCTGAGCCGCAAGCGGGCGCTGTCCA...GCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR GCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGGGCGCGGGGTGGCCTaGCACGAGGGTCATCTGGTG +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAGRGVA*HEGHLV
Trigger: CACCAGATGACCCTCGTGGCAGGCCACCCCGCGCCC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GTAGGCCTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCAGCTTCTCGGAGGCAGTaGCTGAGGCAGACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VGLADCSPGTGQRQASAAASRRQ*LRQTSP
Trigger: TGGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGC...TGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAGGCCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCCAGGATCCCACTTTTaGCTTCTTGCTTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: RSCSWLSMVTSLADSSDSPGSHF*LLASRR
Trigger: CCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGG...GCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCAAGGTGGGTGAGGGCTaGATCAGGGGTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGKVGEG*IRGGVC
Trigger: ACACACACCACCCCTGATCCAGCCCTCACCCACCTT...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCAAGGTGGGTGAGGGCTaGATCAGGGGTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KTAGIPRLWAAMTPPGALKVGEG*IRGGVC
Trigger: ACACACACCACCCCTGATCCAGCCCTCACCCACCTT...GAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACAGGGCCATGGGCTGCTaGGCCAGGAAGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GLDLAALVNGDRVDGAADRAMGC*ARKVGE
Trigger: CTCACCCACCTTCCTGGCCCAGCAGCCCATGGCCCT...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGCTGCTCTGCTTGTTCTaGTTGGTGTCACTCAGACAG +
Preference number: 4 (lower is better)
Translates to: GEAAWCSACVESARPMSRLLCLF*LVSLRQ
Trigger: CTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAG...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGGCATCTTGCGATTCTGGTGCTTaGCGCGGTCCGAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: SGVRRCTSLRCFLVTWASCDSGA*RGPRRW
Trigger: CCAACGCCTCGGACCGCGCCAAGCACCAGAATCGCA...AGATGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGGAGAGGGGAAGGGCACACCCACATGAGCCGTGTCCAGACACCTGGCCCTGCGTCTCTTGGTGCAGCCTaGGATCTTGCAGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: GRGEGHTHMSRVQTPGPASLGAA*DLADVG
Trigger: CCCTACATCTGCAAGATCCCAGGCTGCACCAAGAGA...CGCAGGGCCAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTTCCCCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR CCA 90 bp CTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAGGAGGTGACGTGGGCATCTaGGCCGTGGACCGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LRVHSAPGARASRSSCSGGDVGI*AVDRFH
Trigger: GTGAAAACGGTCCACGGCCCAGATGCCCACGTCACC...TCCTGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTGGACTTGGCCATAGCAGGCATGGGGGCTCATAGTGGTAGTCATGCCAGGACACAGTCCTCCACGGCCTaGCTGGTGCTGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VDLAIAGMGAHSGSHARTQSSTA*LVLLAS
Trigger: CGAGGCCAGCAGCACCAGCCAGGCCGTGGAGGACTG...TGTCCTGGCATGACTACCACTATGAGCCCCCATGCCTGCTATGGCCAAGTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCGAGCCGCCGCTGCACTaGCTGGCCTCGCTCGAGCGC +
Preference number: 4 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKAEPPLH*LASLER
Trigger: GCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTC...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGGCTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTCGGAGGGGCCCACGTTaGAGTCCGCAGCCACCATCC +
Preference number: 4 (lower is better)
Translates to: GLPSGPGVFGGKVGGRCIRRGPR*SPQPPS
Trigger: GGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCG...AATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGGGTGGAGGCTTCACCTaGCTGGCCAGGGCGTCTACG +
Preference number: 4 (lower is better)
Translates to: VVWGCQRSQCFPWDTPARGGGFT*LARAST
Trigger: CGTAGACGCCCTGGCCAGCCAGGTGAAGCCTCCACC...CCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCGTCATGCCAGGACACTaGCTGCCTGCCACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RAPLACALMYCTTSSGSTVMPGH*LPATGC
Trigger: ACAGCCAGTGGCAGGCAGCCAGTGTCCTGGCATGAC...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCGATTGCCCATCGTGGTaGGGTCAGGTGCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCDCPSW*GQVPLL
Trigger: CAGAAGTGGCACCTGACCCCACCACGATGGGCAATC...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp AGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGGCATCTTGGGACCGCATGACCTaGCAGCTCCCGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SGVRRCTSLRCFLVTWASWDRMT*QLPRFS
Trigger: GGAGAACCTCGGGAGCTGCCAGGTCATGCGGTCCCA...AGATGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCTGTGGCTGTGGTaGCTGGGACCGCATGACCTG +
Preference number: 4 (lower is better)
Translates to: GLDLAALVNGDRVDGAADGLWLW*LGPHDL
Trigger: CAGGTCATGCGGTCCCAGCCACCACAGCCACAGGCC...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp TCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAACAGGCCTGTGGCTGTaGTGGCTGGGACCGCATGAC +
Preference number: 4 (lower is better)
Translates to: SEKPVLSVGYTCPVPSSRTGLWL*WLGPHD
Trigger: GTCATGCGGTCCCAGCCACCACAGCCACAGGCCTGT...TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGCAGCTCTACCAAACCTaGAATCAGAATGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PGGEAAWCSACVESARPMQLYQT*NQNVLL
Trigger: CAGGAGCACATTCTGATTCCAGGTTTGGTAGAGCTG...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGTCATTCATATACACTTaGATGGGCTGCCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGGEAAWCSACVESARPMSFIYT*MGCQSQ
Trigger: CTGGGACTGGCAGCCCATCCAAGTGTATATGAATGA...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCAGCGCCCGTAGGAACCGCTaGCCGCCGAGCTGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: SASCLQSSLSRSSLRSASARRNR*PPSCFG
Trigger: CCCGAAGCAGCTCGGCGGCCAGCGGTTCCTACGGGC...GCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CCA 90 bp CGGGCTGGAGAAACGGGACACGTCCACGGGGTTGAGGTAGTCGTGGAGATGGGGAATAGTCTGAGGGGGTaGTGCCTGGAGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RAGETGHVHGVEVVVEMGNSLRG*CLEQEG
Trigger: GCCTTCCTGCTCCAGGCACCACCCCCTCAGACTATT...CCCCATCTCCACGACTACCTCAACCCCGTGGACGTGTCCCGTTTCTCCAGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CCA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGCGTCACCCGCGGGCTaGAGAAACGGGACACGTCCA +
Preference number: 4 (lower is better)
Translates to: GLDLAALVNGDRVDGAADASPAG*RNGTRP
Trigger: TGGACGTGTCCCGTTTCTCCAGCCCGCGGGTGACGC...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR CAA 72 bp AGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTaGGTGACGTGGGCATCTGGGCCGTGGACCGTTTTC +
Preference number: 4 (lower is better)
Translates to: SGVRRCTSLRCF*VTWASGPWTVF
Trigger: GAAAACGGTCCACGGCCCAGATGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTCGGAGGCAGTGGCTaGGGCAGACGTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKALGGSG*GRRLHL
Trigger: GAGATGGAGACGTCTGCCTCAGCCACTGCCTCCGAG...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACG +
Preference number: 4 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSTLLRL*MATGLT
Trigger: CGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGT...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGCCTCAGGCTCGGTCTTaGCCTTGCTGCGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLPQARS*PCCACE
Trigger: TTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGG...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCGGCCTCAGGCTCGGTCTTaGCCTTGCTGCGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: VRLDVLHHVVWKHQVVLRPQARS*PCCACE
Trigger: TTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGG...CCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp TTTGAGCAGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGCATGTACTGCGCCTTaGAGGGCTTCTGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: FEQRCAEVHVIALLLGDVACTAP*RASAPA
Trigger: CGCGGGAGCAGAAGCCCTTCAAGGCGCAGTACATGC...CACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCGCAGGAATCCTTGAGTaGCTTGAGCTTCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSAGILE*LELLLL
Trigger: AAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGC...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACACTCCAGCCAGGGCTaGATCGGGGACCCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKAHSSQG*IGDPKF
Trigger: GAACTTGGGGTCCCCGATTCAGCCCTGGCTGGAGTG...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR TCA 90 bp GGAGGCTGGGGCTCAGAGCACCCGAGAACAAACTCGAGTGATCGCCATCATCCACGACAGCCATGTTGCTaGTGCCTGCGGGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: GGWGSEHPRTNSSDRHHPRQPCC*CLRGWR
Trigger: CCTCCATCCCCGCAGGCATCAGCAACATGGCTGTCG...TGGATGATGGCGATCACTCGAGTTTGTTCTCGGGTGCTCTGAGCCCCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGCCTCGGCGAGGCTGGTaGGCATGGAGCTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLPRRGW*AWSSCP
Trigger: GGGACATGAGCTCCATGCTCACCAGCCTCGCCGAGG...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTACTTCCTCTTCCTACTaGGAGATCCCTAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTTSSSY*EIPRAA
Trigger: GGCTGCCCTAGGGATCTCTCAGTAGGAAGAGGAAGT...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAAGCTACCGCTGCTGCTaGCGCTGCAGCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: AVGLVSGQSLMCWDAASPSYRCC*RCSHHQ
Trigger: TTGGTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCT...TGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACAGCTACCGCTGCTGCTaGCGCTGCAGCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: GLDLAALVNGDRVDGAADSYRCC*RCSHHQ
Trigger: TTGGTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCT...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGAGGGCCATGGGCTaGTGGGCCAGGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTVRAMG*WARKVG
Trigger: ACCCACCTTCCTGGCCCAGCAGCCCATGGCCCTCAC...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGGCTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTTCAGCCAGCTGCTCCTaGGTCAGCGCCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GLPSGPGVFGGKVGGRCISASCS*VSARGE
Trigger: CTCCCCTCTGGCGCTGACGCAGGAGCAGCTGGCTGA...AATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp TCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCAGCGCTTCTGCTCCCGCGTaGAGGCCTGCCAGCGGCACA +
Preference number: 4 (lower is better)
Translates to: SASCLQSSLSRSSLRSASASAPA*RPASGT
Trigger: TGTGCCGCTGGCAGGCCTGCACGCGGGAGCAGAAGC...GCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGTGGGTGCGATTCTGGTaGTTGGCGCGGTCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLWVRFW*LARSEA
Trigger: CGCCTCGGACCGCGCCAAGCACCAGAATCGCACCCA...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTTGGGTGCGATTCTGGTaGTTGGCGCGGTCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTWVRFW*LARSEA
Trigger: CGCCTCGGACCGCGCCAAGCACCAGAATCGCACCCA...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCTCCCAGGCTCCCGGGCCCCGTCCCCGGCATCTCCACGCCACTGTCATTGTTGCTGTGTATCTCTTGGTaGAGCCTGGGATCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SPRLPGPVPGISTPLSLLLCISW*SLGSCR
Trigger: TCTGCAAGATCCCAGGCTGCACCAAGAGATACACAG...CAACAATGACAGTGGCGTGGAGATGCCGGGGACGGGGCCCGGGAGCCTGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCCCAAGTTCCCTGTGGCGATTGCCCATCGTGGTGGGGTCAGGTGCCACTTCTGTGGTGGTCATGTGTTTaGGCAGCTGGAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: PQVPCGDCPSWWGQVPLLWWSCV*AAGGHQ
Trigger: CTGGTGGCCTCCAGCTGCGCAAACACATGACCACCA...CAGAAGTGGCACCTGACCCCACCACGATGGGCAATCGCCACAGGGAACTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GGCTACATTCTACATGCAAACACTGTAAACACGGTCTGGAGAGGCCAGGGCAGCTGGTCCGCAGGCTCATaGGCTCCAGGCCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GYILHANTVNTVWRGQGSWSAGS*APGPAA
Trigger: CGCTGCCGGGCCTGGAGCGCATGAGCCTGCGGACCA...GCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp TCACTGCTCTGCTTGTTCTGGTTGGTGTCACTCAGACAGTTGCTGCTGCTGCTGTGGTCCGCAGGCTCATaGGCTCCAGGCCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLLCLFWLVSLRQLLLLLWSAGS*APGPAA
Trigger: CGCTGCCGGGCCTGGAGCGCATGAGCCTGCGGACCA...CAGCAGCAGCAGCAACTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TTCATTTGCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCCCAGGCCGCCGTCGGTaGTCGGGTGGCTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FICSWPCLWTEFDVLGRSPGRRR*SGGSAG
Trigger: GCCTGCAGAGCCACCCGAGCACCGACGGCGGCCTGG...GCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGCAAATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GGGCTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTGATACACCTGCCCGGTaGCCTCGTCCAGAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: GLPSGPGVFGGKVGGRCIDTPAR*PRPERH
Trigger: GTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATC...AATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GGAGGATACCAGGCATGCACACTGTGGCTTGGTGGAGAACACTGGGCTGCTGGTGCACCACCGCCAGGTTaGCCTGAGGAAAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GGYQACTLWLGGEHWAAGAPPPG*PEERVE
Trigger: CTCCACCCTTTCCTCAGGGCAACCTGGCGGTGGTGC...ACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCAAAGGCAGGCTTCTGCTaGACCACCGCCAGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKAKAGFC*TTARLP
Trigger: GGGCAACCTGGCGGTGGTGCAGCAGAAGCCTGCCTT...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGATGGCTGGCATGTTGCTaGAGGATTGGGGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGWLACC*RIGGTG
Trigger: ACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCA...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp AAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCTGGCTGGCATGTTGCTaGAGGATTGGGGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: KTAGIPRLWAAMTPPGALWLACC*RIGGTG
Trigger: ACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCA...GAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp GTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACTCACTGCTCTGCTTCGTAGTAGTAGAGCATaGTGTGGTCCGGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: VNGDRVDGAADGRLTALLRSSRA*CGPGPH
Trigger: GTGGGGCCCCGGACCACAGCATGCTCTACTACTACG...AAGCAGAGCAGTGAGTCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGGATGACCCCTCCGGGTaGACTCAGCACCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLDDPSG*TQHQAL
Trigger: GAGCGCCTGGTGCTGAGTGCACCCGGAGGGGTCATC...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTTACACTTGGATGGGCTaGCAGTCCCAGACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTYTWMG*QSQTRL
Trigger: AAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTA...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGTCCTCCACGTACACTTGGATGGGCTaGCAGTCCCAGACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: HSPELSVLMALTCRQSSTYTWMG*QSQTRL
Trigger: AAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTA...CGTGGAGGACTGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCTACACTTGGATGGGCTaGCAGTCCCAGACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: KTAGIPRLWAAMTPPGALYTWMG*QSQTRL
Trigger: AAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTA...GAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTGGCTCATCGTCCTGGGTaGCAATCCTTGCTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: HLPGALVQSATGVRLDVLAHRPG*QSLLFD
Trigger: ATCAAAGAGCAAGGATTGCCACCCAGGACGATGAGC...CAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGAAGGCTGGGCTCCTTaGGCAGCTACCGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLDLAALVNGDRVDGAADEGWAP*AATAAA
Trigger: AGCAGCAGCGGTAGCTGCCCAAGGAGCCCAGCCTTC...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCTGCTCTGCTTGTTCTaGTTGGTGTCACTCAGACAG +
Preference number: 4 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPLLCLF*LVSLRQ
Trigger: CTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAG...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CGCTGGCCGTGCAGCCCCGGGCTGGGTAGTCTGGGGTTGTCAGAGAAGCCAGTGTCCTTCTTCTCCCCGTaGATGTGCTCGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: RWPCSPGLGSLGLSEKPVSFFSP*MCSLLM
Trigger: CATCAACAACGAGCACATCCACGGGGAGAAGAAGGA...CACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGGAGAGGGGAAGGGCACACCCACATGAGCCGTGTCCAGACACCTGGCCCTGCGTCCTTCTTCTCCCCGTaGATGTGCTCGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: GRGEGHTHMSRVQTPGPASFFSP*MCSLLM
Trigger: CATCAACAACGAGCACATCCACGGGGAGAAGAAGGA...CGCAGGGCCAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTTCCCCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR CCA 90 bp CCCATCGGGCCTGTTTGGGGCTCCATGAAGCCAGGCTGGCGGGCAGGCAGAAGGTCCTTCTTCTCCCCGTaGATGTGCTCGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: PIGPVWGSMKPGWRAGRRSFFSP*MCSLLM
Trigger: CATCAACAACGAGCACATCCACGGGGAGAAGAAGGA...CCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GGGAGAGGGGAAGGGCACACCCACATGAGCCGTGTCCAGACACCTGGCCCTGCGTGTAGGGTTTCTCGTTaGAGTGGGTGCGATTCTGGT +
Preference number: 4 (lower is better)
Translates to: GRGEGHTHMSRVQTPGPACRVSR*SGCDSG
Trigger: ACCAGAATCGCACCCACTCCAACGAGAAACCCTACA...CGCAGGGCCAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTTCCCCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR CCA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTTGTAGGGTTTCTCGTTaGAGTGGGTGCGATTCTGGT +
Preference number: 4 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPCRVSR*SGCDSG
Trigger: ACCAGAATCGCACCCACTCCAACGAGAAACCCTACA...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCTGGGCATCTGGGCCGTaGACCGTTTTCACATGCTTC +
Preference number: 4 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGWASGP*TVFTCF
Trigger: GAAGCATGTGAAAACGGTCCACGGCCCAGATGCCCA...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGATGGGCATCTGGGCCGTaGACCGTTTTCACATGCTTC +
Preference number: 4 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGWASGP*TVFTCF
Trigger: GAAGCATGTGAAAACGGTCCACGGCCCAGATGCCCA...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAACTGGGCCCCGGGGCTaGACTGACACAGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSTGPRG*TDTARS
Trigger: GCTCCGGGCTGTGTCAGTCCAGCCCCGGGGCCCAGT...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGCTACATTCTACATGCAAACACTGTAAACACGGTCTGGAGAGGCCAGGGCAGCACTGGGCCCCGGGGCTaGACTGACACAGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GYILHANTVNTVWRGQGSTGPRG*TDTARS
Trigger: GCTCCGGGCTGTGTCAGTCCAGCCCCGGGGCCCAGT...GCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp ATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCCGAACCGGTGCATGGTaGTCATGTGTTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: MEPLPGRGGSLVFRVCGVRTGAW*SCVCAA
Trigger: AGCTGCGCAAACACATGACCACCATGCACCGGTTCG...GACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGGATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGACGAACCGGTGCATGGTaGTCATGTGTTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RMEPLPGRGGSLVFRVCGRTGAW*SCVCAA
Trigger: AGCTGCGCAAACACATGACCACCATGCACCGGTTCG...TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TCTCCAGGCGGGAGTAGGCCTTCGAGCAGCCCTCGAACGTGCACTTGTGGGGCTGCTCGAACCGGTGCATaGTGGTCATGTGTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: SPGGSRPSSSPRTCTCGAARTGA*WSCVCA
Trigger: TGCGCAAACACATGACCACCATGCACCGGTTCGAGC...AGCCCCACAAGTGCACGTTCGAGGGCTGCTCGAAGGCCTACTCCCGCCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCGGAGGGGAGGCAGCTTaGTGTTCCGCGTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFGGEAA*CSACVE
Trigger: CTCCACACACGCGGAACACCAAGCTGCCTCCCCTCC...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ATGTGCTGGGACGCAGCGAGCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCACGTTGTGGGTGCTGTaGAAGCGCTGCACCCGCGGC +
Preference number: 4 (lower is better)
Translates to: MCWDAASPDDDVGLVLKLTLWVL*KRCTRG
Trigger: GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGT...GAGTTTGAGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GTGGACTTGGCCATAGCAGGCATGGGGGCTCATAGTGGTAGTCATGCCAGGACAACGTTGTGGGTGCTGTaGAAGCGCTGCACCCGCGGC +
Preference number: 4 (lower is better)
Translates to: VDLAIAGMGAHSGSHARTTLWVL*KRCTRG
Trigger: GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGT...TGTCCTGGCATGACTACCACTATGAGCCCCCATGCCTGCTATGGCCAAGTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTACGTTGTGGGTGCTGTaGAAGCGCTGCACCCGCGGC +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTTLWVL*KRCTRG
Trigger: GCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGT...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGTATTTTTGTTCAGGCTaGAGGGCGCCCCAAAGCCTA +
Preference number: 4 (lower is better)
Translates to: AFRGIHLPGALVQSATGVYFCSG*RAPQSL
Trigger: TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATA...CACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGATGCCCTGGCTTGGCTaGCATGTTGCTGCAGGATTG +
Preference number: 4 (lower is better)
Translates to: RLRAGLTVPILFEQRCAEMPWLG*HVAAGL
Trigger: CAATCCTGCAGCAACATGCCAGCCAAGCCAGGGCAT...CTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp GGAGGATACCAGGCATGCACACTGTGGCTTGGTGGAGAACACTGGGCTGCTGGTCCCATCGGGCCTGTTTaGGGCTCCATGAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGYQACTLWLGGEHWAAGPIGPV*GSMKPG
Trigger: GCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGG...ACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCACCTGACTGGACGGCATaGCAGCCATGGCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: AVGLVSGQSLMCWDAASPPDWTA*QPWHGL
Trigger: CAGGCCATGCCATGGCTGCCATGCCGTCCAGTCAGG...TGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp ATGTGCTGGGACGCAGCGAGCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCGGGGCCTCCAGGAGCTaGGAGTCCACAGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: MCWDAASPDDDVGLVLKLGASRS*ESTVLD
Trigger: GTCCAGCACTGTGGACTCCCAGCTCCTGGAGGCCCC...GAGTTTGAGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGGAATCCCCAGGCTCTaGGCAGCGATGACCCCTCCG +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLGIPRL*AAMTPP
Trigger: CGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCC...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGTGCTCTCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTAAAAGACAAGACAGCTaGAATCCCCAGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GALWAARLRAGLTVPILFKRQDS*NPQALG
Trigger: GCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCTTTT...AAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGAGAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTGTCATATACACTTGGATaGGCTGCCAGTCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: HLPGALVQSATGVRLDVLSYTLG*AASPRL
Trigger: GAGTCTGGGACTGGCAGCCCATCCAAGTGTATATGA...CAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CGCGCCGTCCACTCCTGCCGCCACGGCCTCCATCGCCACGTTCTCGCTGATGCTTCATTCATATACACTTaGATGGGCTGCCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RAVHSCRHGLHRHVLADASFIYT*MGCQSQ
Trigger: CTGGGACTGGCAGCCCATCCAAGTGTATATGAATGA...AGCATCAGCGAGAACGTGGCGATGGAGGCCGTGGCGGCAGGAGTGGACGGCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGCCTGCCACGAGGGTCATCTGGTGGTAATAGTCTGAGGGGGTGGTGCCTGGAGAGGCCACTAGCGAGTTaGGTGAGGTGCGGATCATCC +
Preference number: 4 (lower is better)
Translates to: GLPRGSSGGNSLRGWCLERPLAS*VRCGSS
Trigger: GGATGATCCGCACCTCACCCAACTCGCTAGTGGCCT...CTCCAGGCACCACCCCCTCAGACTATTACCACCAGATGACCCTCGTGGCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433812.1
3UTR CAA 72 bp CAGATGCCCTGGCTTGGCTGGCATGTTGCTGCAGGATaGGGGGAACTGGTTGAGGGCCCCACTGATGGTGCT +
Preference number: 4 (lower is better)
Translates to: QMPWLGWHVAAG*GELVEGPTDGA
Trigger: AGCACCATCAGTGGGGCCCTCAACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCCAGGGCATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CAA 72 bp GGGAATCCGGAGGATACCAGGCATGCACACTGTGGCTaGGTGGAGAACACTGGGCTGCTGGTGAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GNPEDTRHAHCG*VENTGLLVSAG
Trigger: CCCAGCACTCACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCCGGATTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp GGAGGATACCAGGCATGCACACTGTGGCTTGGTGGAGAACACTGGGCTGCTGGTCACTGGCGTGCGCCTTaGTGTACTGCACCACGTCGT +
Preference number: 4 (lower is better)
Translates to: GGYQACTLWLGGEHWAAGHWRAP*CTAPRR
Trigger: ACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTG...ACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGACCGCCAGGTTGCCCTaGGGAAAGGGTGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLTARLP*GKGGGF
Trigger: GAAGCCTCCACCCTTTCCTCAGGGCAACCTGGCGGT...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR TCA 90 bp ATGTGCTGGGACGCAGCGAGCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCCACTCCAGCCAGGGCTaGATCGGGGACCCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: MCWDAASPDDDVGLVLKLHSSQG*IGDPKF
Trigger: GAACTTGGGGTCCCCGATTCAGCCCTGGCTGGAGTG...GAGTTTGAGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGGCTCTGGGCAGCGATaGCCCCTCCGGGTGCACTCA +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSGSGQR*PLRVHS
Trigger: TGAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCC...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAAGGCTCTGGGCAGCGATaGCCCCTCCGGGTGCACTCA +
Preference number: 4 (lower is better)
Translates to: QSQTRLYGVEEPALPNLEGSGQR*PLRVHS
Trigger: TGAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCC...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCGGCTCTGGGCAGCGATaGCCCCTCCGGGTGCACTCA +
Preference number: 4 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKAGSGQR*PLRVHS
Trigger: TGAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCC...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGCCGAATGTCAGCCGTaGAGAAGCCGGAACAGCGCG +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTAECQP*RSRNSA
Trigger: CGCGCTGTTCCGGCTTCTTCACGGCTGACATTCGGC...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGCCACTTTTGGCTTCTTaGTTCTCGGAGGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RLRAGLTVPILFEQRCAEPLLAS*FSEAVA
Trigger: AGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGG...CTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TTGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGCATGGTGGTCGGCAGCTACCGCTGCTaGTGCCGCTGCAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LSDLSFSFLSCSNRCMVVGSYRC*CRCSHH
Trigger: GTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCC...GACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGGCAGCTACCGCTGCTaGTGCCGCTGCAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSGSYRC*CRCSHH
Trigger: GTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCC...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCTTGGGCAGCTACCGCTaGTGCTGCCGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRALGSYR*CCRCSH
Trigger: GTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCCCAA...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCAGCGTGAGGGCCATGGGCTaGTGGGCCAGGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SASCLQSSLSRSSLRSASVRAMG*WARKVG
Trigger: ACCCACCTTCCTGGCCCAGCAGCCCATGGCCCTCAC...GCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGTGAGGGCCATGGGCTaGTGGGCCAGGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAVRAMG*WARKVG
Trigger: ACCCACCTTCCTGGCCCAGCAGCCCATGGCCCTCAC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGCCGACTCACTGCTCTaGTTGTTCTGGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: MEPLPGRGGSLVFRVCGVADSLL*LFWLVS
Trigger: TGACACCAACCAGAACAAGCAGAGCAGTGAGTCGGC...GACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCTTCTGCTCCCGCGTaGAGGCCTGCCAGCGGCACA +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSASAPA*RPASGT
Trigger: TGTGCCGCTGGCAGGCCTGCACGCGGGAGCAGAAGC...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCGGTGCACGTCATTGCGCTaGTTCTTGGTGACGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VRLDVLHHVVWKHQVVLRCTSLR*FLVTWA
Trigger: TGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCA...CCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCAGCGGTGTGCGGAGGTaGACGTCATTGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFSGVRR*TSLRCF
Trigger: GAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCCGGCCTGGCTGGTGCTaGTGGCCTCGGTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKARPGWC*WPRCSL
Trigger: CAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCG...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGAGGAGAGGGCTCGCTaGTGCAGGACGACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSEERAR*CRTTGP
Trigger: GGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTCCTC...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ATGTGCTGGGACGCAGCGAGCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCCATTGTTGGGGGCACTaGCCAGAGGAGAGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: MCWDAASPDDDVGLVLKLHCWGH*PEERAR
Trigger: GCGAGCCCTCTCCTCTGGGCAGTGCCCCCAACAATG...GAGTTTGAGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCAGGTTTCTCCTTCTTGAGCTaGTCGAACCGGTGCATGGTG +
Preference number: 4 (lower is better)
Translates to: DCSPGTGQRQASAAPPPGFSFLS*SNRCMV
Trigger: CACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAA...ACCTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp AGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGTTCTCCTTCTTGAGCTaGTCGAACCGGTGCATGGTG +
Preference number: 4 (lower is better)
Translates to: RLRAGLTVPILFEQRCAEFSFLS*SNRCMV
Trigger: CACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAA...CTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCCGCAGGCTGTACTaGTGCGCCGGCGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSARRLY*CAGVRL
Trigger: CAACCTCACGCCGGCGCAGCAGTACAGCCTGCGGGC...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCGGGGCCGCCAGTGGCTaGCGCGTACTTGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLGAASG*RVLGPQ
Trigger: CTGCGGGCCAAGTACGCGGCAGCCACTGGCGGCCCC...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGTGCGCCTTGATGTACTaGACCACGTCGTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLCALMY*TTSSGS
Trigger: GCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCA...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCAAGAGCGCCACTGGCGTaGGCCTTGATGTACTGCACC +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKARAPLA*ALMYCT
Trigger: GGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAAATCCTGCGCTGGCCGTaGAGCCCCGGGCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: QSQTRLYGVEEPALPNLEILRWP*SPGLGS
Trigger: ACTACCCAGCCCGGGGCTGCACGGCCAGCGCAGGAT...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTTGCCAGGACACTGGCTaGCTGCCACTGGCTGTCGCA +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTCQDTG*LPLAVA
Trigger: TGCGACAGCCAGTGGCAGGCAGCCAGTGTCCTGGCA...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp GGAGGATACCAGGCATGCACACTGTGGCTTGGTGGAGAACACTGGGCTGCTGGTCGTGGTGGGGTCAGGTaGCACTTCTGTCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GGYQACTLWLGGEHWAAGRGGVR*HFCLLR
Trigger: CCTCAGCAGACAGAAGTGGCACCTGACCCCACCACG...ACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp AGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGGCATCTCTTGGGCACAGCCTCTaGTGTTTCCTGACTGGACGG +
Preference number: 4 (lower is better)
Translates to: SGVRRCTSLRCFLVTWASLGHSL*CFLTGR
Trigger: CCGTCCAGTCAGGAAACAGCAGAGGCTGTGCCCAAG...AGATGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GCTGGACTGACACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCATACACTTGGATGGGCTaGCAGTCCCAGACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: AGLTQPGALGLDGSDVQAYTWMG*QSQTRL
Trigger: AAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTA...TGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTGTCAGTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGCCAGGATCCCACTTTTaGCTTCTTGCTTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: RLRAGLTVPILFEQRCAEPGSHF*LLASRR
Trigger: CCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGG...CTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGGGGAAGGTGAAGGCTaGGCTCCTTGGGCAGCTACC +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLGEGEG*APWAAT
Trigger: GGTAGCTGCCCAAGGAGCCCAGCCTTCACCTTCCCC...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGTGCTCTCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTTGTAGGGTTTCTCGTTaGAGTGGGTGCGATTCTGGT +
Preference number: 4 (lower is better)
Translates to: GALWAARLRAGLTVPILFCRVSR*SGCDSG
Trigger: ACCAGAATCGCACCCACTCCAACGAGAAACCCTACA...AAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGAGAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCTCTCTTGGTGCAGCCTaGGATCTTGCAGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: MEPLPGRGGSLVFRVCGVSLGAA*DLADVG
Trigger: CCCTACATCTGCAAGATCCCAGGCTGCACCAAGAGA...GACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCTGGGCATCTGGGCCGTaGACCGTTTTCACATGCTTC +
Preference number: 4 (lower is better)
Translates to: RAPLACALMYCTTSSGSTWASGP*TVFTCF
Trigger: GAAGCATGTGAAAACGGTCCACGGCCCAGATGCCCA...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCACCTGGCTGGTGCTGCTaGCCTCGGTGCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSPGWCC*PRCSLG
Trigger: GCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGG...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAACCTGGCTGGTGCTGCTaGCCTCGGTGCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: QSQTRLYGVEEPALPNLEPGWCC*PRCSLG
Trigger: GCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGG...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCACAGTCCTCCACGGCCTaGCTGGTGCTGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSQSSTA*LVLLAS
Trigger: CGAGGCCAGCAGCACCAGCCAGGCCGTGGAGGACTG...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGACGAACCGGTGCATGGTaGTCATGTGTTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LEPVHGGHVFAQLEATSGRTGAW*SCVCAA
Trigger: AGCTGCGCAAACACATGACCACCATGCACCGGTTCG...TCCGCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCCGAACCGGTGCATGGTaGTCATGTGTTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSRTGAW*SCVCAA
Trigger: AGCTGCGCAAACACATGACCACCATGCACCGGTTCG...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGCGAACCGGTGCATGGTaGTCATGTGTTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLRTGAW*SCVCAA
Trigger: AGCTGCGCAAACACATGACCACCATGCACCGGTTCG...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GCTGGACTGACACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGCTCGAACCGGTGCATaGTGGTCATGTGTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: AGLTQPGALGLDGSDVQAARTGA*WSCVCA
Trigger: TGCGCAAACACATGACCACCATGCACCGGTTCGAGC...TGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTGTCAGTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ACCCACAGCGGCTCCAGCAGCCCCGAGGTATTTAGAAACAAGTCTTCTTTTCAGCCGTCGGTGCTCGGGTaGCTCTGCAGGCGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: THSGSSSPEVFRNKSSFQPSVLG*LCRRRP
Trigger: AGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGG...CTGAAAAGAAGACTTGTTTCTAAATACCTCGGGGCTGCTGGAGCCGCTGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGACCGTCGGTGCTCGGGTaGCTCTGCAGGCGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRPSVLG*LCRRRP
Trigger: AGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGG...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGGCATCTCAGGATTGGGGGAACTaGTTGAGGGCCCCACTGATG +
Preference number: 4 (lower is better)
Translates to: SGVRRCTSLRCFLVTWASQDWGN*LRAPLM
Trigger: CATCAGTGGGGCCCTCAACCAGTTCCCCCAATCCTG...AGATGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGTCCATGAAGCCAGGCTaGCGGGCAGGCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLSMKPG*RAGRRL
Trigger: CAGCCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGA...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCAAAAGACAAGACAGCTaGAATCCCCAGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGKRQDS*NPQALG
Trigger: GCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCTTTT...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGAAAAGACAAGACAGCTaGAATCCCCAGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PQALRLGLDLAALVNGDRKRQDS*NPQALG
Trigger: GCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCTTTT...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACTCACTGCTCTGCTTTGGCTGCAGAGATCATaGAGAGCGTGGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VNGDRVDGAADGRLTALLWLQRS*RAWGCC
Trigger: ACAGCAGCCCCACGCTCTCCATGATCTCTGCAGCCA...AAGCAGAGCAGTGAGTCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGCGTCACCCGCGGGCTaGAGAAACGGGACACGTCCA +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAASPAG*RNGTRP
Trigger: TGGACGTGTCCCGTTTCTCCAGCCCGCGGGTGACGC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GGCTACATTCTACATGCAAACACTGTAAACACGGTCTGGAGAGGCCAGGGCAGCGCTGCTGGTGAGTGCTaGGGGACCGGGCTGCCGTCA +
Preference number: 4 (lower is better)
Translates to: GYILHANTVNTVWRGQGSAAGEC*GTGLPS
Trigger: TGACGGCAGCCCGGTCCCCCAGCACTCACCAGCAGC...GCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CCTGAGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTAATTCCATTTCCAGGTaGGTCTTGGTCACACTGAAC +
Preference number: 4 (lower is better)
Translates to: PEAGPRVHPHSSRPQSIPNSISR*VLVTLN
Trigger: GTTCAGTGTGACCAAGACCCACCTGGAAATGGAATT...AGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CAA 72 bp GCTGGGGGACCGGGCTGCCGTCAGGCCCTGGAGTTTTaGGTGGTAAAGTGGGTGGACGTTGCATTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: AGGPGCRQALEF*VVKWVDVALEK
Trigger: TTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCCGGTCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp GTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGCCTCAGGCTCGGTCTTaGCCTTGCTGCGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: VVWGCQRSQCFPWDTPARPQARS*PCCACE
Trigger: TTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGG...CCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GTTGCTGATGCCTCATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGCCCCGGGGCTGGACTaGCACAGCCCGGAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: VADASFHCTGMLFLFRLEAPGLD*HSPELS
Trigger: CGAGAGCTCCGGGCTGTGTCAGTCCAGCCCCGGGGC...CTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGCATCAGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GGTGCTCTCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGCAGGAATCCTTGAGTaGCTTGAGCTTCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GALWAARLRAGLTVPILFAGILE*LELLLL
Trigger: AAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGC...AAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGAGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp TTCATTTGCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGTGGCTGGGACCGCATaGCCTGGCAGCTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: FICSWPCLWTEFDVLGRSVAGTA*PGSSRG
Trigger: ACCTCGGGAGCTGCCAGGTCATGCGGTCCCAGCCAC...GCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGCAAATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTCGACAGCCATGTTGCTaGTGCCTGCGGGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCRQPCC*CLRGWR
Trigger: CCTCCATCCCCGCAGGCATCAGCAACATGGCTGTCG...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR TCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAACCTCGGCGAGGCTGGTaGGCATGGAGCTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: QSQTRLYGVEEPALPNLEPRRGW*AWSSCP
Trigger: GGGACATGAGCTCCATGCTCACCAGCCTCGCCGAGG...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp AAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCACAACATCTGTCATCTaGAGCGGCCATTGCGCAACA +
Preference number: 4 (lower is better)
Translates to: KTAGIPRLWAAMTPPGALTTSVI*SGHCAT
Trigger: TGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGT...GAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTAAAGCACTGTGTAAATaGGTTTTGCATTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QRQRGGRPQALRLGLDLAKALCK*VLHSFL
Trigger: CAGGAAGGAATGCAAAACTCATTTACACAGTGCTTT...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGTTTCTGCATATCCTTTaGAAGGTTTTGGCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: RQRGGRPQALRLGLDLAAFLHIL*KVLAKV
Trigger: TACTTTGGCCAAAACCTTTCAAAGGATATGCAGAAA...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCAGCCGCTGCTGCTGCCGCTaGAGCCACCACCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SASCLQSSLSRSSLRSASRCCCR*SHHQRR
Trigger: TCTCCTTTGGTGGTGGCTGCAGCGGCAGCAGCAGCG...GCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACTCACTGCTCTGCTTTGCACGTCATTGCGCTaGTTCTTGGTGACGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VNGDRVDGAADGRLTALLCTSLR*FLVTWA
Trigger: TGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCA...AAGCAGAGCAGTGAGTCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGAGCGGTGTGCGGAGGTaGACGTCATTGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLSGVRR*TSLRCF
Trigger: GAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTTTGATGGCTCTGACGTaGAGGCAGTCCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTLMALT*RQSSTA
Trigger: GGCCGTGGAGGACTGCCTGCACGTCAGAGCCATCAA...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCGAGAGGGCTCGCTGCTaGAGGACGACTGGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLERARC*RTTGPR
Trigger: CCGGGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTC...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGATTCTCCTTCTTGAGCTaGTCGAACCGGTGCATGGTG +
Preference number: 4 (lower is better)
Translates to: DLAALVNGDRVDGAADGRFSFLS*SNRCMV
Trigger: CACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAA...TCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCACTGCTCTGCTTGTTCTGGTTGGTGTCACTCAGACAGTTGCTGCTGCTGCTGCTGTCGCGGCGCTCCTaGAGCTGGCTCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: SLLCLFWLVSLRQLLLLLLSRRS*SWLSMV
Trigger: GACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAG...CAGCAGCAGCAGCAACTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAGTGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGCTACATTCTACATGCAAACACTGTAAACACGGTCTGGAGAGGCCAGGGCAGCCGCAGGCTGTACTGCTaGGCCGGCGTGAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: GYILHANTVNTVWRGQGSRRLYC*AGVRLS
Trigger: GCTCAACCTCACGCCGGCGCAGCAGTACAGCCTGCG...GCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp TCACTGCTCTGCTTGTTCTGGTTGGTGTCACTCAGACAGTTGCTGCTGCTGCTGCGCAGGCTGTACTGCTaGGCCGGCGTGAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SLLCLFWLVSLRQLLLLLRRLYC*AGVRLS
Trigger: GCTCAACCTCACGCCGGCGCAGCAGTACAGCCTGCG...CAGCAGCAGCAGCAACTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAGTGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGGTTCACGTTGTGGGTaGTGTGGAAGCGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTGSRCG*CGSAAP
Trigger: GGGTGCAGCGCTTCCACAGCACCCACAACGTGAACC...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCGTGCTCGGGTGGCTCTaGAGGCGGAGGCCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLVLGWL*RRRPRL
Trigger: CAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCAC...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGATACACCTGCCCGGTaGCCTCGTCCAGAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSDTPAR*PRPERH
Trigger: GTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATC...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCAGCTCCGTGGGATACACCTaGCCGGTGCCCTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SASCLQSSLSRSSLRSASSVGYT*PVPSSR
Trigger: TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGA...GCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGTGTCAGAGAAGCCAGTaGTTTCCGTGGGATACACCT +
Preference number: 4 (lower is better)
Translates to: PQALRLGLDLAALVNGDRCQRSQ*FPWDTP
Trigger: AGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACA...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCTGTCAGAGAAGCCAGTaGTTTCCGTGGGATACACCT +
Preference number: 4 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGCQRSQ*FPWDTP
Trigger: AGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACA...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp CCTGAGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTCTCACCTCATTCCACTaGACAGGCATGTTATTTTTG +
Preference number: 4 (lower is better)
Translates to: PEAGPRVHPHSSRPQSIPLTSFH*TGMLFL
Trigger: CAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAG...AGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp CGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCTGCTCCGCTGCGGGGCTaGAGGTGTGGCTGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: RLYGVEEPALPNLESECAAPLRG*RCGCVL
Trigger: CAGCACGCAGCCACACCTGCAGCCCCGCAGCGGAGC...AGCACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp GCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCTCCTAAGAAGTTCCTCATTGGGAGGGGGCTCCGCTaGGGGGCTGCAGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: AQMTMLALSSNSPKKFLIGRGLR*GAAGVA
Trigger: AGCCACACCTGCAGCCCCGCAGCGGAGCCCCCTCCC...AATGAGGAACTTCTTAGGAGAGTTTGAGGACAAGGCCAACATCGTCATCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GTGGACTTGGCCATAGCAGGCATGGGGGCTCATAGTGGTAGTCATGCCAGGACACGTGGTGGGGTCAGGTaGCACTTCTGTCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VDLAIAGMGAHSGSHARTRGGVR*HFCLLR
Trigger: CCTCAGCAGACAGAAGTGGCACCTGACCCCACCACG...TGTCCTGGCATGACTACCACTATGAGCCCCCATGCCTGCTATGGCCAAGTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGCACCGACCCCATGTTaGCCATCGCTCCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAAPTPC*PSLPWA
Trigger: TGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGGATGCCTCATTCCACTaGACAGGCATGTTATTTTTG +
Preference number: 4 (lower is better)
Translates to: GEAAWCSACVESARPMSRDASFH*TGMLFL
Trigger: CAAAAATAACATGCCTGTGCAGTGGAATGAGGCATC...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGGCTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTGCTTCTCGGAGGCAGTaGCTGAGGCAGACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GLPSGPGVFGGKVGGRCIASRRQ*LRQTSP
Trigger: TGGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGC...AATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGGGGAAGGTGAAGGCTaGGCTCCTTGGGCAGCTACC +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAGEGEG*APWAAT
Trigger: GGTAGCTGCCCAAGGAGCCCAGCCTTCACCTTCCCC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCTGCTCTGCTTGTTCTaGTTGGTGTCACTCAGACAG +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTLLCLF*LVSLRQ
Trigger: CTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAG...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTCGCGGTCCGAGGCGTTaGAGAAGGCTTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTRGPRR*RRLCCS
Trigger: GCTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCG...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGTGTAGGGTTTCTCGTTaGAGTGGGTGCGATTCTGGT +
Preference number: 4 (lower is better)
Translates to: PQALRLGLDLAALVNGDRCRVSR*SGCDSG
Trigger: ACCAGAATCGCACCCACTCCAACGAGAAACCCTACA...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGTCCTCCACGTGTAGGGTTTCTCGTTaGAGTGGGTGCGATTCTGGT +
Preference number: 4 (lower is better)
Translates to: HSPELSVLMALTCRQSSTCRVSR*SGCDSG
Trigger: ACCAGAATCGCACCCACTCCAACGAGAAACCCTACA...CGTGGAGGACTGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCTCTCTTGGTGCAGCCTaGGATCTTGCAGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: RAPLACALMYCTTSSGSTSLGAA*DLADVG
Trigger: CCCTACATCTGCAAGATCCCAGGCTGCACCAAGAGA...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTGGAGGGGAGGCAGCTTaGTGTTCCGCGTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCGGEAA*CSACVE
Trigger: CTCCACACACGCGGAACACCAAGCTGCCTCCCCTCC...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGGAGGGGAGGCAGCTTaGTGTTCCGCGTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAGGEAA*CSACVE
Trigger: CTCCACACACGCGGAACACCAAGCTGCCTCCCCTCC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCACGGCGCTCCTGCAGCTaGCTCAGCATGGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSRRSCS*LSMVTS
Trigger: CGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCG...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGAGCCGCCGCTGCACTaGCTGGCCTCGCTCGAGCGC +
Preference number: 4 (lower is better)
Translates to: TRLYGVEEPALPNLESECEPPLH*LASLER
Trigger: GCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTC...ACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TTGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGCATGGTGGTCCGTGCAGCCCCGGGCTaGGTAGTCTGGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: LSDLSFSFLSCSNRCMVVRAAPG*VVWGCQ
Trigger: CTGACAACCCCAGACTACCCAGCCCGGGGCTGCACG...GACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGCCCCAAAGCCTAACTaGCATCCTCCCAGCATAGGG +
Preference number: 4 (lower is better)
Translates to: AVGLVSGQSLMCWDAASPAPKPN*HPPSIG
Trigger: CCCTATGCTGGGAGGATGCCAGTTAGGCTTTGGGGC...TGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGTCATGCCAGGACACTaGCTGCCTGCCACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLVMPGH*LPATGC
Trigger: ACAGCCAGTGGCAGGCAGCCAGTGTCCTGGCATGAC...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp GGCAGCTCCCGAGGTTCTCCAGGCCTCCATCCTGTTCGTACATGTGGATCTGGCATGTTGCTGCAGGATTaGGGGAACTGGTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSSRGSPGLHPVRTCGSGMLLQD*GNWLRA
Trigger: GGCCCTCAACCAGTTCCCCCAATCCTGCAGCAACAT...GCCAGATCCACATGTACGAACAGGATGGAGGCCTGGAGAACCTCGGGAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp ATGTGCTGGGACGCAGCGAGCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCCCAGATGCCCTGGCTTaGCTGGCATGTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MCWDAASPDDDVGLVLKLPDALA*LACCCR
Trigger: CCTGCAGCAACATGCCAGCCAAGCCAGGGCATCTGG...GAGTTTGAGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCGATTGCCCATCGTGGTaGGGTCAGGTGCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFDCPSW*GQVPLL
Trigger: CAGAAGTGGCACCTGACCCCACCACGATGGGCAATC...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCGCACGTACCCCACGGTaGCGGCCAGTGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTARTPR*RPVGLG
Trigger: GCCCAGCCCCACTGGCCGCCACCGTGGGGTACGTGC...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp GGTGCTCTCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTCAGCTCTACCAAACCTaGAATCAGAATGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GALWAARLRAGLTVPILFQLYQT*NQNVLL
Trigger: CAGGAGCACATTCTGATTCCAGGTTTGGTAGAGCTG...AAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGAGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGTCATATACACTTGGATaGGCTGCCAGTCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: PQALRLGLDLAALVNGDRSYTLG*AASPRL
Trigger: GAGTCTGGGACTGGCAGCCCATCCAAGTGTATATGA...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCTCATATACACTTGGATaGGCTGCCAGTCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCSYTLG*AASPRL
Trigger: GAGTCTGGGACTGGCAGCCCATCCAAGTGTATATGA...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCTCATATACACTTGGATaGGCTGCCAGTCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: MEPLPGRGGSLVFRVCGVSYTLG*AASPRL
Trigger: GAGTCTGGGACTGGCAGCCCATCCAAGTGTATATGA...GACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCTCCTAAGAAGTTCCTCATTGCCGGGCGGTGGCTGTaGGCCCCCATCCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: AQMTMLALSSNSPKKFLIAGRWL*APIPPW
Trigger: CCAAGGTGGGATGGGGGCCCACAGCCACCGCCCGGC...AATGAGGAACTTCTTAGGAGAGTTTGAGGACAAGGCCAACATCGTCATCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAAGCCGCTCATCGTCCTaGGTGGCAATCCGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: AVGLVSGQSLMCWDAASPSRSSS*VAIRER
Trigger: TCTCTCTCGGATTGCCACCCAGGACGATGAGCGGCT...TGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCACCGTGTCCAGACACCTaGCCCTGCGTCAGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSPCPDT*PCVSAR
Trigger: TCTGGCGCTGACGCAGGGCCAGGTGTCTGGACACGG...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR TCA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACG +
Preference number: 4 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLTLLRL*MATGLT
Trigger: CGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGT...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp TCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAAGTTGGTCTCATAGATaGCCACCTCAGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SEKPVLSVGYTCPVPSSRSWSHR*PPQPPA
Trigger: AGCAGGAGGCTGAGGTGGTCATCTATGAGACCAACT...TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp TCACTGCTCTGCTTGTTCTGGTTGGTGTCACTCAGACAGTTGCTGCTGCTGCTGGCATGTACTGCGCCTTaGAGGGCTTCTGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: SLLCLFWLVSLRQLLLLLACTAP*RASAPA
Trigger: CGCGGGAGCAGAAGCCCTTCAAGGCGCAGTACATGC...CAGCAGCAGCAGCAACTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp TCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCTAGCATGTACTGCGCCTTaGAGGGCTTCTGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: STAQACYFCSGWRAPQSLACTAP*RASAPA
Trigger: CGCGGGAGCAGAAGCCCTTCAAGGCGCAGTACATGC...TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CCCCAAGTTCCCTGTGGCGATTGCCCATCGTGGTGGGGTCAGGTGCCACTTCTGACAACATCTGTCATCTaGAGCGGCCATTGCGCAACA +
Preference number: 4 (lower is better)
Translates to: PQVPCGDCPSWWGQVPLLTTSVI*SGHCAT
Trigger: TGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGT...CAGAAGTGGCACCTGACCCCACCACGATGGGCAATCGCCACAGGGAACTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR TCA 90 bp CTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGAACAACATCTGTCATCTaGAGCGGCCATTGCGCAACA +
Preference number: 4 (lower is better)
Translates to: LEPVHGGHVFAQLEATSGTTSVI*SGHCAT
Trigger: TGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGT...TCCGCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTTTTCTGCATATCCTTTaGAAGGTTTTGGCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: QRQRGGRPQALRLGLDLAFLHIL*KVLAKV
Trigger: TACTTTGGCCAAAACCTTTCAAAGGATATGCAGAAA...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTGTGTGCTTTTCCTCTATaGCAAGGTATGTTAGAGACC +
Preference number: 4 (lower is better)
Translates to: HLPGALVQSATGVRLDVLCAFPL*QGMLET
Trigger: GGTCTCTAACATACCTTGTCATAGAGGAAAAGCACA...CAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAACGCTGCTGCTGCCGCTaGAGCCACCACCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: QSQTRLYGVEEPALPNLERCCCR*SHHQRR
Trigger: TCTCCTTTGGTGGTGGCTGCAGCGGCAGCAGCAGCG...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TTGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGCATGGTGGTCAGCTACCGCTGCTGCTaGCGCTGCAGCCACCACCAA +
Preference number: 4 (lower is better)
Translates to: LSDLSFSFLSCSNRCMVVSYRCC*RCSHHQ
Trigger: TTGGTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCT...GACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCGGCAGCTACCGCTGCTaGTGCCGCTGCAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLGSYRC*CRCSHH
Trigger: GTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCC...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCACCACCTCAGCCTCCTaGTTACAGTCATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFTTSAS*LQSSLS
Trigger: GGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAGGATGCAGCCTGGGATCTTaGAGATGTAGGGTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LRVHSAPGARASRSSCSGCSLGS*RCRVSR
Trigger: ACGAGAAACCCTACATCTGCAAGATCCCAGGCTGCA...TCCTGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCATGGACCGTTTTCACATaGTTCCGGAGAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKAWTVFT*FRRELG
Trigger: CCCCAGCTCTCTCCGGAAGCATGTGAAAACGGTCCA...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGGACCGTTTTCACATaGTTCCGGAGAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VVWGCQRSQCFPWDTPARWTVFT*FRRELG
Trigger: CCCCAGCTCTCTCCGGAAGCATGTGAAAACGGTCCA...CCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCATGCACGTCATTGCGCTaGTTCTTGGTGACGTGGGCA +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKACTSLR*FLVTWA
Trigger: TGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCA...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCAGCAGCGGTGTGCGGAGGTaGACGTCATTGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SASCLQSSLSRSSLRSASSGVRR*TSLRCF
Trigger: GAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT...GCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCGGTGTGCGGAGGTaGACGTCATTGCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRASGVRR*TSLRCF
Trigger: GAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGGCCGCCAGGCTCCGTaGCGGCCTCACTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TRLYGVEEPALPNLESECGRQAP*RPHCPH
Trigger: ATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCC...ACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCGTGCTCGGGTGGCTCTaGAGGCGGAGGCCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTVLGWL*RRRPRL
Trigger: CAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCAC...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TTTGAGCAGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGTGCGCCTTGATGTACTaGACCACGTCGTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FEQRCAEVHVIALLLGDVCALMY*TTSSGS
Trigger: GCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCA...CACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGATCCTGCGCTGGCCGTaGAGCCCCGGGCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMILRWP*SPGLGS
Trigger: ACTACCCAGCCCGGGGCTGCACGGCCAGCGCAGGAT...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCACTGCTCTGCTTGTTCTGGTTGGTGTCACTCAGACAGTTGCTGCTGCTGCTGAAGGCAGGCTTCTGCTaGACCACCGCCAGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: SLLCLFWLVSLRQLLLLLKAGFC*TTARLP
Trigger: GGGCAACCTGGCGGTGGTGCAGCAGAAGCCTGCCTT...CAGCAGCAGCAGCAACTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGTTCCCTGTGGCGATTaGCCATCGTGGTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAVPCGD*PSWWGQ
Trigger: CTGACCCCACCACGATGGGCAATCGCCACAGGGAAC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCCTGGCTCATGGAGGCTaGCAGGTGATGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRALAHGG*QVMALL
Trigger: CAGCAGAGCCATCACCTGGCAGCCTCCATGAGCCAG...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAAGCACCGACCCCATGTTaGCCATCGCTCCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: QSQTRLYGVEEPALPNLEAPTPC*PSLPWA
Trigger: TGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGC...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp GTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTCATGTTCAGGAACTTaGTCTCCTCGGCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VVWGCQRSQCFPWDTPARSCSGT*SPRRGW
Trigger: CCAGCCTCGCCGAGGAGAGCAAGTTCCTGAACATGA...CCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGCTGGCCGTGCAGCCCCGGGCTGGGTAGTCTGGGGTTGTCAGAGAAGCCAGTGAGATTCAAACCCAAATaGTCCCTACCATCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RWPCSPGLGSLGLSEKPVRFKPK*SLPSFC
Trigger: GCAGAAAGATGGTAGGGAGCATTTGGGTTTGAATCT...CACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCTCCAGGGCCAGCCGGGTaGGGGGAAAGCCGGATCAAG +
Preference number: 4 (lower is better)
Translates to: RLYGVEEPALPNLESECAPGPAG*GESRIK
Trigger: CTTGATCCGGCTTTCCCCGCACCCGGCTGGCCCTGG...AGCACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGGCTCATCGTCCTGGGTaGCAATCCTTGCTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLAHRPG*QSLLFD
Trigger: ATCAAAGAGCAAGGATTGCCACCCAGGACGATGAGC...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCAGCGCTTCTCGGAGGCAGTaGCTGAGGCAGACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SASCLQSSLSRSSLRSASASRRQ*LRQTSP
Trigger: TGGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGC...GCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TCACTGCTCTGCTTGTTCTGGTTGGTGTCACTCAGACAGTTGCTGCTGCTGCTGGAAGGCTGGGCTCCTTaGGCAGCTACCGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLLCLFWLVSLRQLLLLLEGWAP*AATAAA
Trigger: AGCAGCAGCGGTAGCTGCCCAAGGAGCCCAGCCTTC...CAGCAGCAGCAGCAACTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGAAGGTGGGTGAGGGCTaGATCAGGGGTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLKVGEG*IRGGVC
Trigger: ACACACACCACCCCTGATCCAGCCCTCACCCACCTT...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCTGCGATTCTGGTGCTTaGCGCGGTCCGAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKACDSGA*RGPRRW
Trigger: CCAACGCCTCGGACCGCGCCAAGCACCAGAATCGCA...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTGGTGACGTGGGCATCTaGGCCGTGGACCGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCGDVGI*AVDRFH
Trigger: GTGAAAACGGTCCACGGCCCAGATGCCCACGTCACC...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCCAGTCCTCCACGGCCTaGCTGGTGCTGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLQSSTA*LVLLAS
Trigger: CGAGGCCAGCAGCACCAGCCAGGCCGTGGAGGACTG...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TTGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGCATGGTGGTCCCGGGGTTCACGTTGTaGGTGCTGTGGAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LSDLSFSFLSCSNRCMVVPGFTL*VLWKRC
Trigger: GCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG...GACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAACCGGGGTTCACGTTGTaGGTGCTGTGGAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: QSQTRLYGVEEPALPNLEPGFTL*VLWKRC
Trigger: GCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ACCCACAGCGGCTCCAGCAGCCCCGAGGTATTTAGAAACAAGTCTTCTTTTCAGCGTGCAGCCCCGGGCTaGGTAGTCTGGGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: THSGSSSPEVFRNKSSFQRAAPG*VVWGCQ
Trigger: CTGACAACCCCAGACTACCCAGCCCGGGGCTGCACG...CTGAAAAGAAGACTTGTTTCTAAATACCTCGGGGCTGCTGGAGCCGCTGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGCGGAGGGGCCCACGTTaGAGTCCGCAGCCACCATCC +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMRRGPR*SPQPPS
Trigger: GGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCG...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TTCATTTGCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGGTGGAGGCTTCACCTaGCTGGCCAGGGCGTCTACG +
Preference number: 4 (lower is better)
Translates to: FICSWPCLWTEFDVLGRSGGGFT*LARAST
Trigger: CGTAGACGCCCTGGCCAGCCAGGTGAAGCCTCCACC...GCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGCAAATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTGCATGTAGTTTACCCTaGGGATGCCCTGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCACSLP*GCPGRG
Trigger: CCCCCTCCCAGGGCATCCCCAGGGTAAACTACATGC...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp CTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGATGACGATGGCGATTGCCCATCGTaGTGGGGTCAGGTGCCACTT +
Preference number: 4 (lower is better)
Translates to: LVSGQSLMCWDAASPDDDGDCPS*WGQVPL
Trigger: AAGTGGCACCTGACCCCACCACGATGGGCAATCGCC...ATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp TTGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGCATGGTGGTCTCCATGAAGCCAGGCTaGCGGGCAGGCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSDLSFSFLSCSNRCMVVSMKPG*RAGRRL
Trigger: CAGCCTTCTGCCTGCCCGCCAGCCTGGCTTCATGGA...GACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCATGTGGCTGTGGTGGCTaGGACCGCATGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSCGCGG*DRMTWQ
Trigger: CTGCCAGGTCATGCGGTCCCAGCCACCACAGCCACA...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGGCCTGTGGCTGTGGTaGCTGGGACCGCATGACCTG +
Preference number: 4 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRGLWLW*LGPHDL
Trigger: CAGGTCATGCGGTCCCAGCCACCACAGCCACAGGCC...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp CTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGATGACGATGGGCGCATGGAATGGTaGCAAGAGATGCTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: LVSGQSLMCWDAASPDDDGRMEW*QEMLRH
Trigger: GTGCCGCAGCATCTCTTGCCACCATTCCATGCGCCC...ATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp TGTCCTCAAACTCTCCTAAGAAGTTCCTCATTAAGGCCAAGGTCACAGTCAGAGGCCCCCATCCCACCTTaGCTGGCGCGGCGACCCTCG +
Preference number: 4 (lower is better)
Translates to: CPQTLLRSSSLRPRSQSEAPIPP*LARRPS
Trigger: CGAGGGTCGCCGCGCCAGCCAAGGTGGGATGGGGGC...CTCTGACTGTGACCTTGGCCTTAATGAGGAACTTCTTAGGAGAGTTTGAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp TGTCCTCAAACTCTCCTAAGAAGTTCCTCATTAAGGCCAAGGTCACAGTCAGAGCCTCTAGCACGCAGGTaGCCTCTCGGGCGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: CPQTLLRSSSLRPRSQSEPLARR*PLGRRA
Trigger: CGCCCGGCGCCCGAGAGGCCACCTGCGTGCTAGAGG...CTCTGACTGTGACCTTGGCCTTAATGAGGAACTTCTTAGGAGAGTTTGAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGGGTTCACGTACGGGTaGGGGGCGTTGAAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRGFTYG*GALKGD
Trigger: GTCCCCCTTCAACGCCCCCCACCCGTACGTGAACCC...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGTGGCTGCAGAGATCATaGAGAGCGTGGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLWLQRS*RAWGCC
Trigger: ACAGCAGCCCCACGCTCTCCATGATCTCTGCAGCCA...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CAA 72 bp GTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTaGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VCGVGPAHEQES*SDLSFSFLSCS
Trigger: CGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCTCTGCTGTTTCCTaGCTGGACGGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRASAVS*LDGMAA
Trigger: GGCTGCCATGCCGTCCAGTCAGGAAACAGCAGAGGC...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR TCA 90 bp GGTGCTCTCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTTGTGCTTTTCCTCTATaGCAAGGTATGTTAGAGACC +
Preference number: 4 (lower is better)
Translates to: GALWAARLRAGLTVPILFCAFPL*QGMLET
Trigger: GGTCTCTAACATACCTTGTCATAGAGGAAAAGCACA...AAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGAGAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCCCACTTTTGGCTTCTTaGTTCTCGGAGGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFPLLAS*FSEAVA
Trigger: AGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGG...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCGGCAGCTACCGCTGCTaGTGCCGCTGCAGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTGSYRC*CRCSHH
Trigger: GTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCC...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTTGGGCAGCTACCGCTaGTGCTGCCGCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMLGSYR*CCRCSH
Trigger: GTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCCCAA...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGCCGACTCACTGCTCTaGTTGTTCTGGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: AVGLVSGQSLMCWDAASPADSLL*LFWLVS
Trigger: TGACACCAACCAGAACAAGCAGAGCAGTGAGTCGGC...TGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp CGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCTGCCTTGAAGGGCTTCTaGTCCCGCGTGCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RLYGVEEPALPNLESECAALKGF*SRVQAC
Trigger: GCAGGCCTGCACGCGGGAGCAGAAGCCCTTCAAGGC...AGCACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ATGAAAAGGTTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGGCCTGGCTGGTGCTaGTGGCCTCGGTGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: MKRFGVCVCVCVCVCVCVRPGWC*WPRCSL
Trigger: CAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCG...CACACACACACACACACACACACACACACACACACACACCCCAAACCTTTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp TCACTGCTCTGCTTGTTCTGGTTGGTGTCACTCAGACAGTTGCTGCTGCTGCTGGGGTGTGTCATCCAGTaGCGTCAGGTCTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLLCLFWLVSLRQLLLLLGCVIQ*RQVSQA
Trigger: AGCCTGGGAGACCTGACGGCACTGGATGACACACCC...CAGCAGCAGCAGCAACTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCGGGGCCGCCAGTGGCTaGCGCGTACTTGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFGAASG*RVLGPQ
Trigger: CTGCGGGCCAAGTACGCGGCAGCCACTGGCGGCCCC...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TGTCCTCAAACTCTCCTAAGAAGTTCCTCATTAAGGCCAAGGTCACAGTCAGAGGTGCTCGGGTGGCTCTaGAGGCGGAGGCCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: CPQTLLRSSSLRPRSQSEVLGWL*RRRPRL
Trigger: CAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCAC...CTCTGACTGTGACCTTGGCCTTAATGAGGAACTTCTTAGGAGAGTTTGAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAAAGAGCGCCACTGGCGTaGGCCTTGATGTACTGCACC +
Preference number: 4 (lower is better)
Translates to: QSQTRLYGVEEPALPNLERAPLA*ALMYCT
Trigger: GGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCTGATACACCTGCCCGGTaGCCTCGTCCAGAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: RLYGVEEPALPNLESECADTPAR*PRPERH
Trigger: GTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATC...AGCACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGGAACCGCAGCCACCATCCTaGGCTGGCCGTGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SNAPNLLPRFSLTTVKGEPQPPS*AGRAAP
Trigger: CGGGGCTGCACGGCCAGCGCAGGATGGTGGCTGCGG...TTCCCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GTGGACTTGGCCATAGCAGGCATGGGGGCTCATAGTGGTAGTCATGCCAGGACATGGCTGGCATGTTGCTaGAGGATTGGGGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: VDLAIAGMGAHSGSHARTWLACC*RIGGTG
Trigger: ACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCA...TGTCCTGGCATGACTACCACTATGAGCCCCCATGCCTGCTATGGCCAAGTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp GGCTACATTCTACATGCAAACACTGTAAACACGGTCTGGAGAGGCCAGGGCAGCCTGGCTCATGGAGGCTaGCAGGTGATGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GYILHANTVNTVWRGQGSLAHGG*QVMALL
Trigger: CAGCAGAGCCATCACCTGGCAGCCTCCATGAGCCAG...GCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGGATGACCCCTCCGGGTaGACTCAGCACCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMDDPSG*TQHQAL
Trigger: GAGCGCCTGGTGCTGAGTGCACCCGGAGGGGTCATC...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGAATGGTGGCAAGAGATaGTGCGGCACTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLNGGKR*CGTPWA
Trigger: TGCCCAAGGAGTGCCGCAGCATCTCTTGCCACCATT...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp TGCTCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGTGGACAGCGCCCGCTTaGGGCTCAGGCGGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: CSNAPNLLPRFSLTTVKGWTAPA*GSGGAS
Trigger: TGACGCCCCGCCTGAGCCGCAAGCGGGCGCTGTCCA...CCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp TGTCCTCAAACTCTCCTAAGAAGTTCCTCATTAAGGCCAAGGTCACAGTCAGAGCGACCCTCGGCTGGCTaGCTTGTGCCGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CPQTLLRSSSLRPRSQSERPSAG*LVPGLQ
Trigger: CTGGAGCCCCGGCACAAGGCAGCCAGCCGAGGGTCG...CTCTGACTGTGACCTTGGCCTTAATGAGGAACTTCTTAGGAGAGTTTGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GGAGGATACCAGGCATGCACACTGTGGCTTGGTGGAGAACACTGGGCTGCTGGTCATGTCATCATTCTCTaGCCAGTGACTCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GGYQACTLWLGGEHWAAGHVIIL*PVTQRA
Trigger: TGCCCGCTGAGTCACTGGGCAGAGAATGATGACATG...ACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCCCAGACACCTGGCCCTaGGTCAGCGCCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTPDTWP*VSARGE
Trigger: CTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000445186.5
CDS-3UTR CCA 90 bp TCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCTAGCTTCTCGGAGGCAGTaGCTGAGGCAGACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: STAQACYFCSGWRAPQSLASRRQ*LRQTSP
Trigger: TGGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGC...TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TCACTGCTCTGCTTGTTCTGGTTGGTGTCACTCAGACAGTTGCTGCTGCTGCTGGCTTCTCGGAGGCAGTaGCTGAGGCAGACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLLCLFWLVSLRQLLLLLASRRQ*LRQTSP
Trigger: TGGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGC...CAGCAGCAGCAGCAACTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAGTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGAGGGCCATGGGCTGCTaGGCCAGGAAGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMRAMGC*ARKVGE
Trigger: CTCACCCACCTTCCTGGCCCAGCAGCCCATGGCCCT...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCCTGCTGCTGCTGAGCTaGGTGGGCGTGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKALLLLS*VGVALM
Trigger: CATCAATGCCACGCCCACCCAGCTCAGCAGCAGCAG...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCACGCGGTCCGAGGCGTTaGAGAAGGCTTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSRGPRR*RRLCCS
Trigger: GCTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCG...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGGTGACGTGGGCATCTaGGCCGTGGACCGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSGDVGI*AVDRFH
Trigger: GTGAAAACGGTCCACGGCCCAGATGCCCACGTCACC...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGGCTCGAACCGGTGCATaGTGGTCATGTGTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLARTGA*WSCVCA
Trigger: TGCGCAAACACATGACCACCATGCACCGGTTCGAGC...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCCTGCACCACGTCGTCTaGAAGCACCAGGTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKALHHVV*KHQVVL
Trigger: GAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAG...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTCACGGTGGCGGCCAGTaGGGCTGGGCTCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSHGGGQ*GWARGE
Trigger: CTCCCCTCGAGCCCAGCCCCACTGGCCGCCACCGTG...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGATGGGACCGCATGACCTaGCAGCTCCCGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRWDRMT*QLPRFS
Trigger: GGAGAACCTCGGGAGCTGCCAGGTCATGCGGTCCCA...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAACAGGCCTGTGGCTGTaGTGGCTGGGACCGCATGAC +
Preference number: 4 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRTGLWL*WLGPHD
Trigger: GTCATGCGGTCCCAGCCACCACAGCCACAGGCCTGT...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp GGCTACATTCTACATGCAAACACTGTAAACACGGTCTGGAGAGGCCAGGGCAGCACAGTGCTGGACACCTaGTTGACCCCTGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GYILHANTVNTVWRGQGSTVLDT*LTPGEG
Trigger: GCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGT...GCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGGGAATCCCCAGGCTCTaGGCAGCGATGACCCCTCCG +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMGIPRL*AAMTPP
Trigger: CGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCC...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCAAAAAGACAAGACAGCTaGAATCCCCAGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKAKRQDS*NPQALG
Trigger: GCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCTTTT...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCAAAAGACAAGACAGCTaGAATCCCCAGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFKRQDS*NPQALG
Trigger: GCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCTTTT...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCTCCTAAGAAGTTCCTCATTCCGTGCTGCCTCGGCTaGCAAGCGCCGGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: AQMTMLALSSNSPKKFLIPCCLG*QAPALL
Trigger: CAGAAGTGCCGGCGCTTGCCAGCCGAGGCAGCACGG...AATGAGGAACTTCTTAGGAGAGTTTGAGGACAAGGCCAACATCGTCATCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCTGTGTGTGTGTATGGTaGGGAAGATGCACCAATTCA +
Preference number: 4 (lower is better)
Translates to: KTAGIPRLWAAMTPPGALCVCVW*GRCTNS
Trigger: TGAATTGGTGCATCTTCCCCACCATACACACACACA...GAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCGGCTGGATGCTGTCCTaGCAGGCCTGTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLGWMLS*QACGCG
Trigger: ACCACAGCCACAGGCCTGTCAGGACAGCATCCAGCC...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR TCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCAACAACATCTGTCATCTaGAGCGGCCATTGCGCAACA +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKATTSVI*SGHCAT
Trigger: TGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGT...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGGCCGAATGTCAGCCGTaGAGAAGCCGGAACAGCGCG +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMAECQP*RSRNSA
Trigger: CGCGCTGTTCCGGCTTCTTCACGGCTGACATTCGGC...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTCAGAGTCACACTCTaGGTGGTGCTGTTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTVRVTL*VVLFGK
Trigger: CTTGCCAAACAGCACCACTCAGAGTGTGACTCTGAC...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGCCGACTCACTGCTCTaGTTGTTCTGGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTADSLL*LFWLVS
Trigger: TGACACCAACCAGAACAAGCAGAGCAGTGAGTCGGC...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGCCGACTCACTGCTCTaGTTGTTCTGGTTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLADSLL*LFWLVS
Trigger: TGACACCAACCAGAACAAGCAGAGCAGTGAGTCGGC...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTTCAGCCAGCTGCTCCTaGGTCAGCGCCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TRLYGVEEPALPNLESECSASCS*VSARGE
Trigger: CTCCCCTCTGGCGCTGACGCAGGAGCAGCTGGCTGA...ACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000452692.5
CDS-3UTR GCA 90 bp GGAGGATACCAGGCATGCACACTGTGGCTTGGTGGAGAACACTGGGCTGCTGGTTGCAGCCTGGGATCTTaGAGATGTAGGGTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: GGYQACTLWLGGEHWAAGCSLGS*RCRVSR
Trigger: ACGAGAAACCCTACATCTGCAAGATCCCAGGCTGCA...ACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTATCTCTTGGTaGAGCCTGGGATCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKALCISW*SLGSCR
Trigger: TCTGCAAGATCCCAGGCTGCACCAAGAGATACACAG...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCCTGTGTATCTCTTGGTaGAGCCTGGGATCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFLCISW*SLGSCR
Trigger: TCTGCAAGATCCCAGGCTGCACCAAGAGATACACAG...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTTGGACCGTTTTCACATaGTTCCGGAGAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCWTVFT*FRRELG
Trigger: CCCCAGCTCTCTCCGGAAGCATGTGAAAACGGTCCA...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TGCTCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGGAGGAGAGGGCTCGCTaGTGCAGGACGACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: CSNAPNLLPRFSLTTVKGEERAR*CRTTGP
Trigger: GGGCCCAGTCGTCCTGCAGCAGCGAGCCCTCTCCTC...CCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTAGCTGCTCGAACCGGTaGATGGTGGTCATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTSCSNR*MVVMCL
Trigger: CAAACACATGACCACCATGCACCGGTTCGAGCAGCT...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGTTCTCCTTCTTGAGCTaGTCGAACCGGTGCATGGTG +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLFSFLS*SNRCMV
Trigger: CACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAA...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTGTCAGAGAAGCCAGTaGTTTCCGTGGGATACACCT +
Preference number: 4 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFCQRSQ*FPWDTP
Trigger: AGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACA...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TTCATTTGCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCCGTAGTAGTAGAGCATaGTGTGGTCCGGGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: FICSWPCLWTEFDVLGRSRSSRA*CGPGPH
Trigger: GTGGGGCCCCGGACCACAGCATGCTCTACTACTACG...GCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGCAAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCAGATTCAAACCCAAATaGTCCCTACCATCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCRFKPK*SLPSFC
Trigger: GCAGAAAGATGGTAGGGAGCATTTGGGTTTGAATCT...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGATGACGATTACACTTGGATGGGCTaGCAGTCCCAGACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: LVSGQSLMCWDAASPDDDYTWMG*QSQTRL
Trigger: AAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTA...ATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp ACCCACAGCGGCTCCAGCAGCCCCGAGGTATTTAGAAACAAGTCTTCTTTTCAGGCTGAGGCCCCTGGCTaGAGAGATCATGGAGAGCGT +
Preference number: 4 (lower is better)
Translates to: THSGSSSPEVFRNKSSFQAEAPG*RDHGER
Trigger: ACGCTCTCCATGATCTCTGCAGCCAGGGGCCTCAGC...CTGAAAAGAAGACTTGTTTCTAAATACCTCGGGGCTGCTGGAGCCGCTGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp TCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGGAATGGGCTGCTGGTGAGTaGTGGGGGACCGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SNAPNLLPRFSLTTVKGEWAAGE*WGTGLP
Trigger: CGGCAGCCCGGTCCCCCAGCACTCACCAGCAGCCCA...TTCCCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGGCTCATCGTCCTGGGTaGCAATCCTTGCTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: VVWGCQRSQCFPWDTPARAHRPG*QSLLFD
Trigger: ATCAAAGAGCAAGGATTGCCACCCAGGACGATGAGC...CCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCGAAGGCTGGGCTCCTTaGGCAGCTACCGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLEGWAP*AATAAA
Trigger: AGCAGCAGCGGTAGCTGCCCAAGGAGCCCAGCCTTC...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CGGTGCCGGAGCTCACCTCATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCAAGGTGGGTGAGGGCTaGATCAGGGGTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RCRSSPHSTAQACYFCSGKVGEG*IRGGVC
Trigger: ACACACACCACCCCTGATCCAGCCCTCACCCACCTT...GCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAGCTCCGGCACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp TTCATTTGCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCCGCGGTCCGAGGCGTTaGAGAAGGCTTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: FICSWPCLWTEFDVLGRSRGPRR*RRLCCS
Trigger: GCTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCG...GCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGCAAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTTCTCTTGGTGCAGCCTaGGATCTTGCAGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTSLGAA*DLADVG
Trigger: CCCTACATCTGCAAGATCCCAGGCTGCACCAAGAGA...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CGGTGCCGGAGCTCACCTCATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCCAGGATTGGGGGAACTaGTTGAGGGCCCCACTGATG +
Preference number: 4 (lower is better)
Translates to: RCRSSPHSTAQACYFCSGQDWGN*LRAPLM
Trigger: CATCAGTGGGGCCCTCAACCAGTTCCCCCAATCCTG...GCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAGCTCCGGCACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGATTGCCCATCGTGGTaGGGTCAGGTGCCACTTCTG +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSDCPSW*GQVPLL
Trigger: CAGAAGTGGCACCTGACCCCACCACGATGGGCAATC...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCCCCATCGGGCCTGTTTaGGGCTCCATGAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLPIGPV*GSMKPG
Trigger: GCCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGG...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTGCCCGTAGGAACCGCTaGCCGCCGAGCTGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSARRNR*PPSCFG
Trigger: CCCGAAGCAGCTCGGCGGCCAGCGGTTCCTACGGGC...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTAGAATATATACAGGTTaGGACTGGCAAGGGAAATCC +
Preference number: 4 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTRIYTG*DWQGKS
Trigger: GGATTTCCCTTGCCAGTCCCAACCTGTATATATTCT...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp CTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGATGACGATAGTTGGTCTCATAGATaGCCACCTCAGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LVSGQSLMCWDAASPDDDSWSHR*PPQPPA
Trigger: AGCAGGAGGCTGAGGTGGTCATCTATGAGACCAACT...ATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp GCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCTCCTAAGAAGTTCCTCATTGCATGTACTGCGCCTTaGAGGGCTTCTGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: AQMTMLALSSNSPKKFLIACTAP*RASAPA
Trigger: CGCGGGAGCAGAAGCCCTTCAAGGCGCAGTACATGC...AATGAGGAACTTCTTAGGAGAGTTTGAGGACAAGGCCAACATCGTCATCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCCACTGGCGTGCGCCTTaGTGTACTGCACCACGTCGT +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLHWRAP*CTAPRR
Trigger: ACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTG...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCACCGCCAGGTTGCCCTaGGGAAAGGGTGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTTARLP*GKGGGF
Trigger: GAAGCCTCCACCCTTTCCTCAGGGCAACCTGGCGGT...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR TCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCCACTCCAGCCAGGGCTaGATCGGGGACCCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTHSSQG*IGDPKF
Trigger: GAACTTGGGGTCCCCGATTCAGCCCTGGCTGGAGTG...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR TCA 90 bp AGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGAAAGCACTGTGTAAATaGGTTTTGCATTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RLRAGLTVPILFEQRCAEKALCK*VLHSFL
Trigger: CAGGAAGGAATGCAAAACTCATTTACACAGTGCTTT...CTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GTTGCTGATGCCTCATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGCCGAATGTCAGCCGTaGAGAAGCCGGAACAGCGCG +
Preference number: 4 (lower is better)
Translates to: VADASFHCTGMLFLFRLEAECQP*RSRNSA
Trigger: CGCGCTGTTCCGGCTTCTTCACGGCTGACATTCGGC...CTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGCATCAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCGCCGAATGTCAGCCGTaGAGAAGCCGGAACAGCGCG +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTAECQP*RSRNSA
Trigger: CGCGCTGTTCCGGCTTCTTCACGGCTGACATTCGGC...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCTCCTAAGAAGTTCCTCATTGTCCAGGCTGGCGTCTaGGAGTGGGGAGATGGACAG +
Preference number: 4 (lower is better)
Translates to: AQMTMLALSSNSPKKFLIVQAGV*EWGDGQ
Trigger: CTGTCCATCTCCCCACTCTCAGACGCCAGCCTGGAC...AATGAGGAACTTCTTAGGAGAGTTTGAGGACAAGGCCAACATCGTCATCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTCCACTTTTGGCTTCTTaGTTCTCGGAGGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCPLLAS*FSEAVA
Trigger: AGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGG...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCATGGACCGTTTTCACATaGTTCCGGAGAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSWTVFT*FRRELG
Trigger: CCCCAGCTCTCTCCGGAAGCATGTGAAAACGGTCCA...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCATGCACGTCATTGCGCTaGTTCTTGGTGACGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSCTSLR*FLVTWA
Trigger: TGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCA...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCGGGTGTGTCATCCAGTaGCGTCAGGTCTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLGCVIQ*RQVSQA
Trigger: AGCCTGGGAGACCTGACGGCACTGGATGACACACCC...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTAGCTGCTCGAACCGGTaGATGGTGGTCATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCSCSNR*MVVMCL
Trigger: CAAACACATGACCACCATGCACCGGTTCGAGCAGCT...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGTGGTCCGCAGGCTCATaGGCTCCAGGCCCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMWSAGS*APGPAA
Trigger: CGCTGCCGGGCCTGGAGCGCATGAGCCTGCGGACCA...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTGTGCTGTGGAAGCGCTaGACCCGCGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSVLWKR*TRGRDR
Trigger: CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCAC...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCGTGCTGTGGAAGCGCTaGACCCGCGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFVLWKR*TRGRDR
Trigger: CCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCAC...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTTGCTGATGCCTCATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGTCCGTGGGATACACCTaGCCGGTGCCCTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: VADASFHCTGMLFLFRLESVGYT*PVPSSR
Trigger: TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGA...CTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGCATCAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCATCCTGCGCTGGCCGTaGAGCCCCGGGCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFILRWP*SPGLGS
Trigger: ACTACCCAGCCCGGGGCTGCACGGCCAGCGCAGGAT...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ATGAAAAGGTTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGACACTGGCTGCCTaGCACTGGCTGTCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: MKRFGVCVCVCVCVCVCVRTLAA*HWLSQL
Trigger: CAGCTGCGACAGCCAGTGGCAGGCAGCCAGTGTCCT...CACACACACACACACACACACACACACACACACACACACCCCAAACCTTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp CTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAGGAAGATTCAAACCCAAATaGTCCCTACCATCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LRVHSAPGARASRSSCSGRFKPK*SLPSFC
Trigger: GCAGAAAGATGGTAGGGAGCATTTGGGTTTGAATCT...TCCTGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ATGAAAAGGTTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCGGATCATCCGCTaGAGGTCCAGGCTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: MKRFGVCVCVCVCVCVCVVRIIR*RSRLAS
Trigger: AGACGCCAGCCTGGACCTGCAGCGGATGATCCGCAC...CACACACACACACACACACACACACACACACACACACACCCCAAACCTTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGGCGAGTTGGGTGAGGTaGGGATCATCCGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMASWVR*GSSAAG
Trigger: ACCTGCAGCGGATGATCCGCACCTCACCCAACTCGC...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGTATGGTGGGGAAGATaGACCAATTCACCCTACAGT +
Preference number: 4 (lower is better)
Translates to: AVGLVSGQSLMCWDAASPVWWGR*TNSPYS
Trigger: ACTGTAGGGTGAATTGGTGCATCTTCCCCACCATAC...TGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGTCACACTCTGAGTGGTaGTGTTTGGCAAGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLSHSEW*CLARLP
Trigger: TGGCAACCTTGCCAAACAGCACCACTCAGAGTGTGA...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp AGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTAACCATACAGCCTAATTTCTaGTCGAATGCACCAAATTTA +
Preference number: 4 (lower is better)
Translates to: RLGPGCTLTPRGLSPSLTIQPNF*SNAPNL
Trigger: TAAATTTGGTGCATTCGAGCAGAAATTAGGCTGTAT...GGTTAGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp ACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGAAGGCTGGGCTCCTTaGGCAGCTACCGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TRLYGVEEPALPNLESECEGWAP*AATAAA
Trigger: AGCAGCAGCGGTAGCTGCCCAAGGAGCCCAGCCTTC...ACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGGCTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTCTGCTCTGCTTGTTCTaGTTGGTGTCACTCAGACAG +
Preference number: 4 (lower is better)
Translates to: GLPSGPGVFGGKVGGRCILLCLF*LVSLRQ
Trigger: CTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAG...AATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTTGTAGGGTTTCTCGTTaGAGTGGGTGCGATTCTGGT +
Preference number: 4 (lower is better)
Translates to: REEAGTARSCKHQRLESTCRVSR*SGCDSG
Trigger: ACCAGAATCGCACCCACTCCAACGAGAAACCCTACA...AGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TTGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGCATGGTGGTCTGGGCATCTGGGCCGTaGACCGTTTTCACATGCTTC +
Preference number: 4 (lower is better)
Translates to: LSDLSFSFLSCSNRCMVVWASGP*TVFTCF
Trigger: GAAGCATGTGAAAACGGTCCACGGCCCAGATGCCCA...GACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCGGTGACGTGGGCATCTaGGCCGTGGACCGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLGDVGI*AVDRFH
Trigger: GTGAAAACGGTCCACGGCCCAGATGCCCACGTCACC...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTCAGTCCTCCACGGCCTaGCTGGTGCTGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSQSSTA*LVLLAS
Trigger: CGAGGCCAGCAGCACCAGCCAGGCCGTGGAGGACTG...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGCCGGGCTGGGTAGTCTaGGGTTGTCAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMPGWVV*GCQRSQ
Trigger: CTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGG...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TGCTCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGCTGGACTGGGTGAGGTaGTGGCACTCCAGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CSNAPNLLPRFSLTTVKGLDWVR*WHSSQG
Trigger: GCCCTGGCTGGAGTGCCACCACCTCACCCAGTCCAG...CCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCACAGTGCTGGACACCTaGTTGACCCCTGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLTVLDT*LTPGEG
Trigger: GCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGT...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp GTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTCATTCATATACACTTaGATGGGCTGCCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VVWGCQRSQCFPWDTPARSFIYT*MGCQSQ
Trigger: CTGGGACTGGCAGCCCATCCAAGTGTATATGAATGA...CCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GGCTACATTCTACATGCAAACACTGTAAACACGGTCTGGAGAGGCCAGGGCAGCATCGGTAGGGGCGCATaGAATGGTGGCAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: GYILHANTVNTVWRGQGSIGRGA*NGGKRC
Trigger: GCATCTCTTGCCACCATTCCATGCGCCCCTACCGAT...GCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCTCCTTAAGGTGCTCCTaGGCCACATCAGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLSLRCS*ATSAGL
Trigger: CAGCCCCGCTGATGTGGCCCAGGAGCACCTTAAGGA...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GGCTACATTCTACATGCAAACACTGTAAACACGGTCTGGAGAGGCCAGGGCAGCATGCACACTGTGGCTTaGTGGAGAACACTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GYILHANTVNTVWRGQGSMHTVA*WRTLGC
Trigger: GCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCAT...GCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CAA 72 bp GAGCTCACCTCATTCCACTGCACAGGCATGTTATTTTaGTTCAGGCTGGAGGGCGCCCCAAAGCCTAACTGG +
Preference number: 4 (lower is better)
Translates to: ELTSFHCTGMLF*FRLEGAPKPNW
Trigger: CCAGTTAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGTGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
3UTR CAA 72 bp GCTGATGCCTCATTCCACTGCACAGGCATGTTATTTTaGTTCAGGCTGGAGGGCGCCCCAAAGCCTAACTGG +
Preference number: 4 (lower is better)
Translates to: ADASFHCTGMLF*FRLEGAPKPNW
Trigger: CCAGTTAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGCATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000452692.5
CDS-3UTR TCA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAAAGCACTGTGTAAATaGGTTTTGCATTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RAPLACALMYCTTSSGSTKALCK*VLHSFL
Trigger: CAGGAAGGAATGCAAAACTCATTTACACAGTGCTTT...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp ATGAAAAGGTTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACACGTCCACGGGGTTaGGGTAGTCGTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: MKRFGVCVCVCVCVCVCVTRPRG*GSRGDG
Trigger: CCCATCTCCACGACTACCTCAACCCCGTGGACGTGT...CACACACACACACACACACACACACACACACACACACACCCCAAACCTTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCGTGAGGGCCATGGGCTaGTGGGCCAGGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFVRAMG*WARKVG
Trigger: ACCCACCTTCCTGGCCCAGCAGCCCATGGCCCTCAC...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCATGTCGTACTCCTTGGTaGAGTCTTCCCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSCRTPW*SLPSGS
Trigger: ACTGCCACTGGGAAGACTGCACCAAGGAGTACGACA...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCTCCCGCGTGCAGGCCTaGCAGCGGCACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFSRVQA*QRHTNS
Trigger: GGAGTTTGTGTGCCGCTGGCAGGCCTGCACGCGGGA...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCGCCTTGAAGGGCTTCTaGTCCCGCGTGCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFALKGF*SRVQAC
Trigger: GCAGGCCTGCACGCGGGAGCAGAAGCCCTTCAAGGC...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTGGCAAGGCCACGGCCTGGCTGGTaGTGCTGGCCTCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: VYSGMSSVQNIYRLGLARPRPGW*CWPRCS
Trigger: AGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGG...CCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTGGAGAAACAGGATTGGGTTTGATGGCTCTGACGTaGAGGCAGTCCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GVFGGKVGGRCIGETGLGLMALT*RQSSTA
Trigger: GGCCGTGGAGGACTGCCTGCACGTCAGAGCCATCAA...ACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GTTGCTGATGCCTCATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGTTGATGGCTCTGACGTaGAGGCAGTCCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: VADASFHCTGMLFLFRLELMALT*RQSSTA
Trigger: GGCCGTGGAGGACTGCCTGCACGTCAGAGCCATCAA...CTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGCATCAGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGGAACTGTCGCGGCGCTCCTaGAGCTGGCTCAGCATGGTC +
Preference number: 4 (lower is better)
Translates to: SNAPNLLPRFSLTTVKGELSRRS*SWLSMV
Trigger: GACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAG...TTCCCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGGCCCGCAGGCTGTACTaGTGCGCCGGCGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMARRLY*CAGVRL
Trigger: CAACCTCACGCCGGCGCAGCAGTACAGCCTGCGGGC...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCTCCCTACCATCTTTCTaGATATCCTTTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGSLPSF*ISFERF
Trigger: AAACCTTTCAAAGGATATGCAGAAAGATGGTAGGGA...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR GCA 90 bp AAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCTCCCTACCATCTTTCTaGATATCCTTTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: KTAGIPRLWAAMTPPGALSLPSF*ISFERF
Trigger: AAACCTTTCAAAGGATATGCAGAAAGATGGTAGGGA...GAGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGAAGTCCGCGGAGCCGTaGTGCCTCGGCTGGCAAGCG +
Preference number: 4 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMKSAEP*CLGWQA
Trigger: CGCTTGCCAGCCGAGGCAGCACGGCTCCGCGGACTT...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GGGCTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTAGGAAAATTCAACGATaGTCCCTCAGAGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLPSGPGVFGGKVGGRCIRKIQR*SLRVLR
Trigger: CCTCAGGACTCTGAGGGAGCATCGTTGAATTTTCCT...AATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GGCTACATTCTACATGCAAACACTGTAAACACGGTCTGGAGAGGCCAGGGCAGCCCAGGATCCCACTTTTaGCTTCTTGCTTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GYILHANTVNTVWRGQGSPGSHF*LLASRR
Trigger: CCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGG...GCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCTGCCCCAAAGCCTAACTaGCATCCTCCCAGCATAGGG +
Preference number: 4 (lower is better)
Translates to: RLYGVEEPALPNLESECAAPKPN*HPPSIG
Trigger: CCCTATGCTGGGAGGATGCCAGTTAGGCTTTGGGGC...AGCACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTTATTTTTGTTCAGGCTaGAGGGCGCCCCAAAGCCTA +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCYFCSG*RAPQSL
Trigger: TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATA...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGATGACGATCCCCATGAAAAGGTTTaGGGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LVSGQSLMCWDAASPDDDPHEKV*GVCVCV
Trigger: CACACACACACACACACCCCAAACCTTTTCATGGGG...ATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCCTGAGTGGTGCTGTTTaGCAAGGTTGCCACACATTC +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRALSGAV*QGCHTF
Trigger: GAATGTGTGGCAACCTTGCCAAACAGCACCACTCAG...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CAA 72 bp GAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTaGAGCTGCTCGAACCGGTGCATGGTGGTCATGTGT +
Preference number: 4 (lower is better)
Translates to: EQESLSDLSFSF*SCSNRCMVVMC
Trigger: ACACATGACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CAA 72 bp GCTGGGACGCAGCGAGCCCAGATGACGATGTTGGCCTaGTCCTCAAACTCTCCTAAGAAGTTCCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: AGTQRAQMTMLA*SSNSPKKFLIK
Trigger: CTTAATGAGGAACTTCTTAGGAGAGTTTGAGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTCTCGGAGGCAGTGGCTaGGGCAGACGTCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSLGGSG*GRRLHL
Trigger: GAGATGGAGACGTCTGCCTCAGCCACTGCCTCCGAG...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCCCTCAGGCTCGGTCTTaGCCTTGCTGCGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTPQARS*PCCACE
Trigger: TTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGG...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCGGTGTAGGCCGAGCTaGCCGTGCTGGTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMRCRPS*PCWWSC
Trigger: ACAGCTCCACCAGCACGGTCAGCTCGGCCTACACCG...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCGCCACTTCTGTCTGCTaGGGGTGCCCCAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFATSVC*GCPRCP
Trigger: AGGGCATCTGGGGCACCCTCAGCAGACAGAAGTGGC...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR TCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCTGCTGGACACCTGGTTaGCCCCTGGTGAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFCWTPG*PLVRAR
Trigger: CCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCA...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR TCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTGAGAACAAACTCGAGTaGTCGCCATCATCCATGATG +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCENKLE*SPSSMM
Trigger: CATCATGGATGATGGCGATCACTCGAGTTTGTTCTC...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR TCA 90 bp GACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGATTTCTGCATATCCTTTaGAAGGTTTTGGCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: DLAALVNGDRVDGAADGRFLHIL*KVLAKV
Trigger: TACTTTGGCCAAAACCTTTCAAAGGATATGCAGAAA...TCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCATGTGCTTTTCCTCTATaGCAAGGTATGTTAGAGACC +
Preference number: 4 (lower is better)
Translates to: AVGLVSGQSLMCWDAASPCAFPL*QGMLET
Trigger: GGTCTCTAACATACCTTGTCATAGAGGAAAAGCACA...TGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp GTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTGGCAAGGGCTGAGGGCACCCGCTaGCAGATGCCCGTAGGAACC +
Preference number: 4 (lower is better)
Translates to: VYSGMSSVQNIYRLGLARAEGTR*QMPVGT
Trigger: GGTTCCTACGGGCATCTGTCAGCGGGTGCCCTCAGC...CCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTCGCTGCTGCTGCCGCTaGAGCCACCACCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSRCCCR*SHHQRR
Trigger: TCTCCTTTGGTGGTGGCTGCAGCGGCAGCAGCAGCG...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTGGCAAGGTCCCGCGTGCAGGCCTaGCAGCGGCACACAAACTCC +
Preference number: 4 (lower is better)
Translates to: VYSGMSSVQNIYRLGLARSRVQA*QRHTNS
Trigger: GGAGTTTGTGTGCCGCTGGCAGGCCTGCACGCGGGA...CCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCACGTCATTGCGCTaGTTCTTGGTGACGTGGGCA +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMCTSLR*FLVTWA
Trigger: TGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCA...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTTGGTGGTCATGTGTTTaGGCAGCTGGAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: TRLYGVEEPALPNLESECWWSCV*AAGGHQ
Trigger: CTGGTGGCCTCCAGCTGCGCAAACACATGACCACCA...ACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAAGCTGCTCGAACCGGTaGATGGTGGTCATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRSCSNR*MVVMCL
Trigger: CAAACACATGACCACCATGCACCGGTTCGAGCAGCT...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTCCAGGGCGTCTACGGTaGCGGAGCTCACCTCATTCC +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSPGRLR*RSSPHS
Trigger: GGAATGAGGTGAGCTCCGGCACCGTAGACGCCCTGG...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCAGGACACTGGCTGCCTaGCACTGGCTGTCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFRTLAA*HWLSQL
Trigger: CAGCTGCGACAGCCAGTGGCAGGCAGCCAGTGTCCT...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp CGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCTTCATGTTCAGGAACTTaGTCTCCTCGGCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLYGVEEPALPNLESECASCSGT*SPRRGW
Trigger: CCAGCCTCGCCGAGGAGAGCAAGTTCCTGAACATGA...AGCACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCCTGCTCTGCTTGTTCTaGTTGGTGTCACTCAGACAG +
Preference number: 4 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKALLCLF*LVSLRQ
Trigger: CTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAG...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGGGCATCTGGGCCGTaGACCGTTTTCACATGCTTC +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMWASGP*TVFTCF
Trigger: GAAGCATGTGAAAACGGTCCACGGCCCAGATGCCCA...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCGCAGCTGGCTCAGCATaGTCACCTCGCTCGCGGACA +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFAAGSA*SPRSRT
Trigger: TGTCCGCGAGCGAGGTGACCATGCTGAGCCAGCTGC...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAACCTGGCTCCGCCGCCTaGAGCCTCGTGGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQPGSAA*SLVGEG
Trigger: GCCTTCCCCCACGAGGCTCCAGGCGGCGGAGCCAGG...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTCCGGGGTTCACGTTGTaGGTGCTGTGGAAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSPGFTL*VLWKRC
Trigger: GCAGCGCTTCCACAGCACCCACAACGTGAACCCCGG...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCCCGTCGGTGCTCGGGTaGCTCTGCAGGCGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFPSVLG*LCRRRP
Trigger: AGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGG...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGATGTTGCTGCAGGATTaGGGGAACTGGTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMMLLQD*GNWLRA
Trigger: GGCCCTCAACCAGTTCCCCCAATCCTGCAGCAACAT...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp GTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTGGCAAGGGGCTGTGGAGGAGGCTaGGGCTCAGAGCACCCGAGA +
Preference number: 4 (lower is better)
Translates to: VYSGMSSVQNIYRLGLARGCGGG*GSEHPR
Trigger: TCTCGGGTGCTCTGAGCCCCAGCCTCCTCCACAGCC...CCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GTTCCAAATTCCATTTCCAGGTGGGTCTTGGTCACACTGAACAGGAAAATTCAACTGAGAGTGGGGAGATaGACAGCGCCCGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: VPNSISRWVLVTLNRKIQLRVGR*TAPACG
Trigger: GCCGCAAGCGGGCGCTGTCCATCTCCCCACTCTCAG...TTGAATTTTCCTGTTCAGTGTGACCAAGACCCACCTGGAAATGGAATTTGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCGGAGATGGGGTGCGCTaGCAGCGCCCCCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFGDGVR*QRPRSA
Trigger: TGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCC...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTGGAGAAACAGGATTGGGTCTTGGTGGAGAACACTaGGCTGCTGGTGAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GVFGGKVGGRCIGETGLGLGGEH*AAGECW
Trigger: CCAGCACTCACCAGCAGCCCAGTGTTCTCCACCAAG...ACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCGCTTTCATTTGCAGTTaGCCTTGTCTCTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAAFICS*PCLWTE
Trigger: CTCTGTCCAGAGACAAGGCCAACTGCAAATGAAAGC...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp TGTCCTCAAACTCTCCTAAGAAGTTCCTCATTAAGGCCAAGGTCACAGTCAGAGACCTTGCTGCGCTTGTaGATGGCGACAGGGTTGACG +
Preference number: 4 (lower is better)
Translates to: CPQTLLRSSSLRPRSQSETLLRL*MATGLT
Trigger: CGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGT...CTCTGACTGTGACCTTGGCCTTAATGAGGAACTTCTTAGGAGAGTTTGAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGAGTTGGTCTCATAGATaGCCACCTCAGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMSWSHR*PPQPPA
Trigger: AGCAGGAGGCTGAGGTGGTCATCTATGAGACCAACT...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp TGCTCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGTGTCCCCATTCTCTTTaGGCAGCGGTGTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: CSNAPNLLPRFSLTTVKGCPHSL*AAVCGG
Trigger: ACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACA...CCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp GGCTACATTCTACATGCAAACACTGTAAACACGGTCTGGAGAGGCCAGGGCAGCGCAGGAATCCTTGAGTaGCTTGAGCTTCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GYILHANTVNTVWRGQGSAGILE*LELLLL
Trigger: AAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGC...GCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTCACTGGCGTGCGCCTTaGTGTACTGCACCACGTCGT +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSHWRAP*CTAPRR
Trigger: ACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTG...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTGGCAAGGGGCTGGATGCTGTCCTaGCAGGCCTGTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VYSGMSSVQNIYRLGLARGWMLS*QACGCG
Trigger: ACCACAGCCACAGGCCTGTCAGGACAGCATCCAGCC...CCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp GGAGGATACCAGGCATGCACACTGTGGCTTGGTGGAGAACACTGGGCTGCTGGTAAAGCACTGTGTAAATaGGTTTTGCATTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GGYQACTLWLGGEHWAAGKALCK*VLHSFL
Trigger: CAGGAAGGAATGCAAAACTCATTTACACAGTGCTTT...ACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp GTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACTCACTGCTCTGCTTTTTCTGCATATCCTTTaGAAGGTTTTGGCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: VNGDRVDGAADGRLTALLFLHIL*KVLAKV
Trigger: TACTTTGGCCAAAACCTTTCAAAGGATATGCAGAAA...AAGCAGAGCAGTGAGTCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp CGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCTTGCTTCGGGAGTTGTTaGTGTAGGCCACTAGCGAGT +
Preference number: 4 (lower is better)
Translates to: RLYGVEEPALPNLESECACFGSC*CRPLAS
Trigger: ACTCGCTAGTGGCCTACATCAACAACTCCCGAAGCA...AGCACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTCGCAGCGAGCCCAGATaGCGATGTTGGCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSRSEPR*RCWPCP
Trigger: AGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCG...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp ACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTACCACCTCAGCCTCCTaGTTACAGTCATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TRLYGVEEPALPNLESECTTSAS*LQSSLS
Trigger: GGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT...ACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCGCTTCTGCTCCCGCGTaGAGGCCTGCCAGCGGCACA +
Preference number: 4 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFASAPA*RPASGT
Trigger: TGTGCCGCTGGCAGGCCTGCACGCGGGAGCAGAAGC...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCTGCTGCTGGCCTCGGTaGTCTCTGGGCCGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFCCWPR*SLGRQA
Trigger: AGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCA...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCTTCTCCTTCTTGAGCTaGTCGAACCGGTGCATGGTG +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLFSFLS*SNRCMV
Trigger: CACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAA...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTGGTTCACGTTGTGGGTaGTGTGGAAGCGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSGSRCG*CGSAAP
Trigger: GGGTGCAGCGCTTCCACAGCACCCACAACGTGAACC...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCCAAAGGCAGGCTTCTaGTGCACCACCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFPKAGF*CTTARL
Trigger: CAACCTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGG...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp GTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACTCACTGCTCTGCTTTCCCTACCATCTTTCTaGATATCCTTTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: VNGDRVDGAADGRLTALLSLPSF*ISFERF
Trigger: AAACCTTTCAAAGGATATGCAGAAAGATGGTAGGGA...AAGCAGAGCAGTGAGTCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp ACCCACAGCGGCTCCAGCAGCCCCGAGGTATTTAGAAACAAGTCTTCTTTTCAGGGCAGCTTCTGGGCTTaGCCCAAGGAGTACATTTTT +
Preference number: 4 (lower is better)
Translates to: THSGSSSPEVFRNKSSFQGSFWA*PKEYIF
Trigger: AAAAATGTACTCCTTGGGGCAAGCCCAGAAGCTGCC...CTGAAAAGAAGACTTGTTTCTAAATACCTCGGGGCTGCTGGAGCCGCTGTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTGGAGAAACAGGATTGGGTGGAGGATACCAGGCATaGACACTGTGGCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GVFGGKVGGRCIGETGLGGGYQA*TLWLGG
Trigger: TCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCC...ACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCCCTGGCTGGTGCTGCTaGCCTCGGTGCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFPGWCC*PRCSLG
Trigger: GCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGG...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCATGTTGCTGCAGGATTaGGGGAACTGGTTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTMLLQD*GNWLRA
Trigger: GGCCCTCAACCAGTTCCCCCAATCCTGCAGCAACAT...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGGCTCATCGTCCTGGGTaGCAATCCGAGAGAGACAAA +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMAHRPG*QSERDK
Trigger: TTTGTCTCTCTCGGATTGCCACCCAGGACGATGAGC...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCTCCTAAGAAGTTCCTCATTACTGTAAACACGGTCTaGAGAGGCCAGGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AQMTMLALSSNSPKKFLITVNTV*RGQGSF
Trigger: GAAGCTGCCCTGGCCTCTCCAGACCGTGTTTACAGT...AATGAGGAACTTCTTAGGAGAGTTTGAGGACAAGGCCAACATCGTCATCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTTTTTTGGTGGTAAAGTaGGTGGACGTTGCATTGGAG +
Preference number: 4 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCFLVVK*VDVALE
Trigger: CTCCAATGCAACGTCCACCCACTTTACCACCAAAAA...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCCAGGCATGCACACTGTaGCTTGGTGGAGAACACTGG +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTQACTL*LGGEHW
Trigger: CCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTG...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCTGTCCCCATTCTCTTTaGGCAGCGGTGTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFCPHSL*AAVCGG
Trigger: ACCTCCGCACACCGCTGCTCAAAGAGAATGGGGACA...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCTGTCGTACTCCTTGGTaGAGTCTTCCCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTCRTPW*SLPSGS
Trigger: ACTGCCACTGGGAAGACTGCACCAAGGAGTACGACA...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TGCTCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGTGCGCCTTGATGTACTaGACCACGTCGTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CSNAPNLLPRFSLTTVKGCALMY*TTSSGS
Trigger: GCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCA...CCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAATCCTGCGCTGGCCGTaGAGCCCCGGGCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQILRWP*SPGLGS
Trigger: ACTACCCAGCCCGGGGCTGCACGGCCAGCGCAGGAT...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TGTCCTCAAACTCTCCTAAGAAGTTCCTCATTAAGGCCAAGGTCACAGTCAGAGGCTTGGCTGGCATGTTaGTGCAGGATTGGGGGAACT +
Preference number: 4 (lower is better)
Translates to: CPQTLLRSSSLRPRSQSEAWLAC*CRIGGT
Trigger: AGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGC...CTCTGACTGTGACCTTGGCCTTAATGAGGAACTTCTTAGGAGAGTTTGAGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTGGCAAGGTGGAGAGCGTGGGGCTaGTGTGCACAGAACGGAGGT +
Preference number: 4 (lower is better)
Translates to: VYSGMSSVQNIYRLGLARWRAWG*CAQNGG
Trigger: ACCTCCGTTCTGTGCACAGCAGCCCCACGCTCTCCA...CCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAAAAAGTGGGTGGACGTTaGATTGGAGAAACAGGATTG +
Preference number: 4 (lower is better)
Translates to: QSQTRLYGVEEPALPNLEKVGGR*IGETGL
Trigger: CAATCCTGTTTCTCCAATGCAACGTCCACCCACTTT...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GTTGCTGATGCCTCATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGCCAGGATCCCACTTTTaGCTTCTTGCTTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VADASFHCTGMLFLFRLEPGSHF*LLASRR
Trigger: CCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGG...CTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAATGAGGCATCAGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTAAGGTGGGTGAGGGCTaGATCAGGGGTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSKVGEG*IRGGVC
Trigger: ACACACACCACCCCTGATCCAGCCCTCACCCACCTT...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTGCTGCTGCTGAGCTaGGTGGGCGTGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMLLLLS*VGVALM
Trigger: CATCAATGCCACGCCCACCCAGCTCAGCAGCAGCAG...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTATTTTTGTTCAGGCTaGAGGGCGCCCCAAAGCCTA +
Preference number: 4 (lower is better)
Translates to: DSALRSRRASSTKPGIRMYFCSG*RAPQSL
Trigger: TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATA...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCCAGATGCCCTGGCTTaGCTGGCATGTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMPDALA*LACCCR
Trigger: CCTGCAGCAACATGCCAGCCAAGCCAGGGCATCTGG...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTACCCCAAGTTCCCTGTaGCGATTGCCCATCGTGGTG +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSTPSSL*RLPIVV
Trigger: CACCACGATGGGCAATCGCCACAGGGAACTTGGGGT...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGACAGCTCTACCAAACCTaGAATCAGAATGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRQLYQT*NQNVLL
Trigger: CAGGAGCACATTCTGATTCCAGGTTTGGTAGAGCTG...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGTGTGTGTGTGTGTATaGTGGGGAAGATGCACCAAT +
Preference number: 4 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRVCVCV*WGRCTN
Trigger: ATTGGTGCATCTTCCCCACCATACACACACACACAC...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp ATGTGCTGGGACGCAGCGAGCCCAGATGACGATGTTGGCCTTGTCCTCAAACTCGCATTAAACATTTCTTaGCAAAGGCGGGATAGTCAA +
Preference number: 4 (lower is better)
Translates to: MCWDAASPDDDVGLVLKLALNIS*QRRDSQ
Trigger: TTGACTATCCCGCCTTTGCCAAGAAATGTTTAATGC...GAGTTTGAGGACAAGGCCAACATCGTCATCTGGGCTCGCTGCGTCCCAGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp CGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCTGCAGGAATCCTTGAGTaGCTTGAGCTTCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RLYGVEEPALPNLESECAAGILE*LELLLL
Trigger: AAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGC...AGCACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCTGTGCTTTTCCTCTATaGCAAGGTATGTTAGAGACC +
Preference number: 4 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKACAFPL*QGMLET
Trigger: GGTCTCTAACATACCTTGTCATAGAGGAAAAGCACA...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTATCTCAGGAAGGCGATaGACACCACCACAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSISGRR*TPPQSH
Trigger: GTGGCTCTGTGGTGGTGTTCATCGCCTTCCTGAGAT...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCCTGTGTATCTCTTGGTaGAGCCTGGGATCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTLCISW*SLGSCR
Trigger: TCTGCAAGATCCCAGGCTGCACCAAGAGATACACAG...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTTGGGCACAGCCTCTaGTGTTTCCTGACTGGACGG +
Preference number: 4 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMLGHSL*CFLTGR
Trigger: CCGTCCAGTCAGGAAACAGCAGAGGCTGTGCCCAAG...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR GCA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGTCCCTACCATCTTTCTaGATATCCTTTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: NVSREEAGTARSCKHQRLSLPSF*ISFERF
Trigger: AAACCTTTCAAAGGATATGCAGAAAGATGGTAGGGA...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp GTTCCAAATTCCATTTCCAGGTGGGTCTTGGTCACACTGAACAGGAAAATTCAAGGACAGAGTTTGATGTaGTGGGACGCAGCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VPNSISRWVLVTLNRKIQGQSLM*WDAASP
Trigger: TGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCC...TTGAATTTTCCTGTTCAGTGTGACCAAGACCCACCTGGAAATGGAATTTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GTTCCAAATTCCATTTCCAGGTGGGTCTTGGTCACACTGAACAGGAAAATTCAAAAGGTGGGTGAGGGCTaGATCAGGGGTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VPNSISRWVLVTLNRKIQKVGEG*IRGGVC
Trigger: ACACACACCACCCCTGATCCAGCCCTCACCCACCTT...TTGAATTTTCCTGTTCAGTGTGACCAAGACCCACCTGGAAATGGAATTTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAAGGGCCATGGGCTGCTaGGCCAGGAAGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQRAMGC*ARKVGE
Trigger: CTCACCCACCTTCCTGGCCCAGCAGCCCATGGCCCT...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCTGCGATTCTGGTGCTTaGCGCGGTCCGAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFCDSGA*RGPRRW
Trigger: CCAACGCCTCGGACCGCGCCAAGCACCAGAATCGCA...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGGAATGGGCATCTGGGCCGTaGACCGTTTTCACATGCTTC +
Preference number: 4 (lower is better)
Translates to: SNAPNLLPRFSLTTVKGEWASGP*TVFTCF
Trigger: GAAGCATGTGAAAACGGTCCACGGCCCAGATGCCCA...TTCCCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAGAGGCTTCACCTGGCTaGCCAGGGCGTCTACGGTGC +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQEASPG*PGRLRC
Trigger: GCACCGTAGACGCCCTGGCCAGCCAGGTGAAGCCTC...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAGGTGGAGGCTTCACCTaGCTGGCCAGGGCGTCTACG +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQGGGFT*LARAST
Trigger: CGTAGACGCCCTGGCCAGCCAGGTGAAGCCTCCACC...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCTGTGGCTGTGGTGGCTaGGACCGCATGACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFCGCGG*DRMTWQ
Trigger: CTGCCAGGTCATGCGGTCCCAGCCACCACAGCCACA...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCTCATATACACTTGGATaGGCTGCCAGTCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTSYTLG*AASPRL
Trigger: GAGTCTGGGACTGGCAGCCCATCCAAGTGTATATGA...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCTTCATTCATATACACTTaGATGGGCTGCCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RLYGVEEPALPNLESECASFIYT*MGCQSQ
Trigger: CTGGGACTGGCAGCCCATCCAAGTGTATATGAATGA...AGCACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTGGCAAGGAGGCCACTAGCGAGTTaGGTGAGGTGCGGATCATCC +
Preference number: 4 (lower is better)
Translates to: VYSGMSSVQNIYRLGLARRPLAS*VRCGSS
Trigger: GGATGATCCGCACCTCACCCAACTCGCTAGTGGCCT...CCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTCAGAGTTTGATGTGCTaGGACGCAGCGAGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSQSLMC*DAASPD
Trigger: ATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTG...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp TTCATTTGCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCTATACAGGTTGGGACTaGCAAGGGAAATCCTATCTC +
Preference number: 4 (lower is better)
Translates to: FICSWPCLWTEFDVLGRSYTGWD*QGKSYL
Trigger: GAGATAGGATTTCCCTTGCCAGTCCCAACCTGTATA...GCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGCAAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCAGTTGGTCTCATAGATaGCCACCTCAGCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFSWSHR*PPQPPA
Trigger: AGCAGGAGGCTGAGGTGGTCATCTATGAGACCAACT...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCTGTCGTACTCCTTGGTaGAGTCTTCCCAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFCRTPW*SLPSGS
Trigger: ACTGCCACTGGGAAGACTGCACCAAGGAGTACGACA...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TGCTCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGTGTCAGAGAAGCCAGTaGTTTCCGTGGGATACACCT +
Preference number: 4 (lower is better)
Translates to: CSNAPNLLPRFSLTTVKGCQRSQ*FPWDTP
Trigger: AGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACA...CCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAGGGGAAGGTGAAGGCTaGGCTCCTTGGGCAGCTACC +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQGEGEG*APWAAT
Trigger: GGTAGCTGCCCAAGGAGCCCAGCCTTCACCTTCCCC...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCGGTGACGTGGGCATCTaGGCCGTGGACCGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFGDVGI*AVDRFH
Trigger: GTGAAAACGGTCCACGGCCCAGATGCCCACGTCACC...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCGAACCGGTGCATGGTaGTCATGTGTTTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMRTGAW*SCVCAA
Trigger: AGCTGCGCAAACACATGACCACCATGCACCGGTTCG...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTTCCAAATTCCATTTCCAGGTGGGTCTTGGTCACACTGAACAGGAAAATTCAAATGCCCTGGCTTGGCTaGCATGTTGCTGCAGGATTG +
Preference number: 4 (lower is better)
Translates to: VPNSISRWVLVTLNRKIQMPWLG*HVAAGL
Trigger: CAATCCTGCAGCAACATGCCAGCCAAGCCAGGGCAT...TTGAATTTTCCTGTTCAGTGTGACCAAGACCCACCTGGAAATGGAATTTGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCTCTTAGCAATGTTCCCTaGCTTTCATTTGCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: RLYGVEEPALPNLESECALSNVP*LSFAVG
Trigger: GCCAACTGCAAATGAAAGCCAGGGAACATTGCTAAG...AGCACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp TGCTCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGGAGAACAAACTCGAGTaGTCGCCATCATCCATGATG +
Preference number: 4 (lower is better)
Translates to: CSNAPNLLPRFSLTTVKGENKLE*SPSSMM
Trigger: CATCATGGATGATGGCGATCACTCGAGTTTGTTCTC...CCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCTGTCAGAGAAGCCAGTaGTTTCCGTGGGATACACCT +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFCQRSQ*FPWDTP
Trigger: AGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACA...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAACCAAAGGCAGGCTTCTaGTGCACCACCGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQPKAGF*CTTARL
Trigger: CAACCTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGG...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTTATTTTTGTTCAGGCTaGAGGGCGCCCCAAAGCCTA +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSYFCSG*RAPQSL
Trigger: TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATA...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp TGTCCTCAAACTCTCCTAAGAAGTTCCTCATTAAGGCCAAGGTCACAGTCAGAGTCATTCATATACACTTaGATGGGCTGCCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: CPQTLLRSSSLRPRSQSESFIYT*MGCQSQ
Trigger: CTGGGACTGGCAGCCCATCCAAGTGTATATGAATGA...CTCTGACTGTGACCTTGGCCTTAATGAGGAACTTCTTAGGAGAGTTTGAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CAA 72 bp CTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATaGGAGAAACAGGATTGGGTAAACACGCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: LEFLVVKWVDVA*EKQDWVNTQLP
Trigger: AGGAAGTTGCGTGTTTACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CAA 72 bp CTGAAGCCAGTTCCAAATTCCATTTCCAGGTGGGTCTaGGTCACACTGAACAGGAAAATTCAACGATGCTCC +
Preference number: 4 (lower is better)
Translates to: LKPVPNSISRWV*VTLNRKIQRCS
Trigger: GGAGCATCGTTGAATTTTCCTGTTCAGTGTGACCAAGACCCACCTGGAAATGGAATTTGGAACTGGCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp TGCTCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGGGGTCTTGGTCACACTaGACAGGAAAATTCAACGAT +
Preference number: 4 (lower is better)
Translates to: CSNAPNLLPRFSLTTVKGGSWSH*TGKFND
Trigger: ATCGTTGAATTTTCCTGTTCAGTGTGACCAAGACCC...CCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGAGCA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGTGCAGCCTGGGATCTTaGAGATGTAGGGTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMCSLGS*RCRVSR
Trigger: ACGAGAAACCCTACATCTGCAAGATCCCAGGCTGCA...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTGTGTATCTCTTGGTaGAGCCTGGGATCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMLCISW*SLGSCR
Trigger: TCTGCAAGATCCCAGGCTGCACCAAGAGATACACAG...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGGAAGCTGTTTGGCAAGGTTaGCACACATTCCCCATGAAA +
Preference number: 4 (lower is better)
Translates to: SNAPNLLPRFSLTTVKGEAVWQG*HTFPMK
Trigger: TTTCATGGGGAATGTGTGGCAACCTTGCCAAACAGC...TTCCCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp CTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGTCCTTCTTCTCCCCGTaGATGTGCTCGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: LIFPEQSIQYSIQIQTQMSFFSP*MCSLLM
Trigger: CATCAACAACGAGCACATCCACGGGGAGAAGAAGGA...CATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCGCTCGAACCGGTGCATaGTGGTCATGTGTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFARTGA*WSCVCA
Trigger: TGCGCAAACACATGACCACCATGCACCGGTTCGAGC...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAACAGGATTGGGGGAACTaGTTGAGGGCCCCACTGATG +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQQDWGN*LRAPLM
Trigger: CATCAGTGGGGCCCTCAACCAGTTCCCCCAATCCTG...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCAGCTCTACCAAACCTaGAATCAGAATGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFQLYQT*NQNVLL
Trigger: CAGGAGCACATTCTGATTCCAGGTTTGGTAGAGCTG...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp ACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTAAAGCACTGTGTAAATaGGTTTTGCATTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TRLYGVEEPALPNLESECKALCK*VLHSFL
Trigger: CAGGAAGGAATGCAAAACTCATTTACACAGTGCTTT...ACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR TCA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCTTTCTGCATATCCTTTaGAAGGTTTTGGCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLFLHIL*KVLAKV
Trigger: TACTTTGGCCAAAACCTTTCAAAGGATATGCAGAAA...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCCCACTTTTGGCTTCTTaGTTCTCGGAGGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFPLLAS*FSEAVA
Trigger: AGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGG...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCACCTCAGCCTCCTaGTTACAGTCATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQTTSAS*LQSSLS
Trigger: GGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAATGCGCCTTGATGTACTaGACCACGTCGTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQCALMY*TTSSGS
Trigger: GCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCA...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp TGTCCTCAAACTCTCCTAAGAAGTTCCTCATTAAGGCCAAGGTCACAGTCAGAGAGATTCAAACCCAAATaGTCCCTACCATCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: CPQTLLRSSSLRPRSQSERFKPK*SLPSFC
Trigger: GCAGAAAGATGGTAGGGAGCATTTGGGTTTGAATCT...CTCTGACTGTGACCTTGGCCTTAATGAGGAACTTCTTAGGAGAGTTTGAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp TGCTCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGTTGGAGAAACAGGATTaGGTAAACACGCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: CSNAPNLLPRFSLTTVKGLEKQD*VNTQLP
Trigger: AGGAAGTTGCGTGTTTACCCAATCCTGTTTCTCCAA...CCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp GTTCCAAATTCCATTTCCAGGTGGGTCTTGGTCACACTGAACAGGAAAATTCAAAGTTGGCCTTGTCTCTaGACAGAGTTTGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: VPNSISRWVLVTLNRKIQSWPCL*TEFDVL
Trigger: CAGCACATCAAACTCTGTCCAGAGACAAGGCCAACT...TTGAATTTTCCTGTTCAGTGTGACCAAGACCCACCTGGAAATGGAATTTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
3UTR CAA 72 bp ACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATaGCGCAACAACCCCTCAAGCCTATTTAACACTTTT +
Preference number: 4 (lower is better)
Translates to: TFSYNICHLKRP*RNNPSSLFNTF
Trigger: AAAAGTGTTAAATAGGCTTGAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
3UTR CAA 72 bp TATTCAGGGATGTCTTCTGTACAGAATATATACAGGTaGGGACTGGCAAGGGAAATCCTATCTCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: YSGMSSVQNIYR*GLAREILSQEG
Trigger: GCCTTCCTGAGATAGGATTTCCCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAGCCACACATTCCCCATaGAAAGGTTTGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQATHSP*KGLGCV
Trigger: CACACACCCCAAACCTTTTCATGGGGAATGTGTGGC...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCGGGCTACATTCTACATaGAAACACTGTAAACACGGT +
Preference number: 4 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFGLHST*KHCKHG
Trigger: ACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCCC...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTGATGCCTCATTCCACTaGACAGGCATGTTATTTTTG +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSDASFH*TGMLFL
Trigger: CAAAAATAACATGCCTGTGCAGTGGAATGAGGCATC...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAATGCAGCCTGGGATCTTaGAGATGTAGGGTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQCSLGS*RCRVSR
Trigger: ACGAGAAACCCTACATCTGCAAGATCCCAGGCTGCA...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR GCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAATCCCTGGCTTTCATTTaGAGTTGGCCTTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQSLAFI*SWPCLW
Trigger: CCAGAGACAAGGCCAACTGCAAATGAAAGCCAGGGA...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAATCCTTCTTCTCCCCGTaGATGTGCTCGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQSFFSP*MCSLLM
Trigger: CATCAACAACGAGCACATCCACGGGGAGAAGAAGGA...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAGAGTCACACTCTGAGTaGTGCTGTTTGGCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQESHSE*CCLARL
Trigger: CAACCTTGCCAAACAGCACCACTCAGAGTGTGACTC...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR GCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTTCCCTACCATCTTTCTaGATATCCTTTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSSLPSF*ISFERF
Trigger: AAACCTTTCAAAGGATATGCAGAAAGATGGTAGGGA...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CCA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTAGATATAAATTTGGCTaGACGACTCACCTACAGTAT +
Preference number: 4 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSRYKFG*TTHLQY
Trigger: ATACTGTAGGTGAGTCGTCCAGCCAAATTTATATCT...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR TCA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCTGTGCTTTTCCTCTATaGCAAGGTATGTTAGAGACC +
Preference number: 4 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFCAFPL*QGMLET
Trigger: GGTCTCTAACATACCTTGTCATAGAGGAAAAGCACA...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS GCA 90 bp CGCCGCGCAGCCCCTACCGCCGGCGAGCAGGCGGCTCCCCGAGGCTaGGGCGCGCCGCGCGGCCCAAGCTCTTTCCTCCGGCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: RRAAPTAGEQAAPRG*GAPRGPSSFLRLLL
Trigger: CAGGAGGAGCCGGAGGAAAGAGCTTGGGCCGCGCGGCGCGCCGCAGCCTCGGGGAGCCGCCTGCTCGCCGGCGGTAGGGGCTGCGCGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS CCA 90 bp GGCCTCTCGGGCGCCGGGCGGTGGCTGTGGGCCCCCATCCCACCTTaGCTGGCGCGGCGACCCTCGGCTGGCTGCCTTGTGCCGGGGCTC +
Preference number: 5 (lower is better)
Translates to: GLSGAGRWLWAPIPP*LARRPSAGCLVPGL
Trigger: GAGCCCCGGCACAAGGCAGCCAGCCGAGGGTCGCCGCGCCAGCCAAGGTGGGATGGGGGCCCACAGCCACCGCCCGGCGCCCGAGAGGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AGGGCATCGGGCCGCCGCACAGGGTCGCTGGCCCGCCTGGCTCCGCCGCCTGGATGCGCCGGCGTGAGGTaGAGCAGCCCGGAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: RASGRRTGSLARLAPPPGCAGVR*SSPEPP
Trigger: CGGCGGCTCCGGGCTGCTCAACCTCACGCCGGCGCA...TCCAGGCGGCGGAGCCAGGCGGGCCAGCGACCCTGTGCGGCGGCCCGATGCCCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS CCA 90 bp TCTCGGGCGCCGGGCGGTGGCTGTGGGCCCCCATCCCACCTTGGCTaGCGCGGCGACCCTCGGCTGGCTGCCTTGTGCCGGGGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SRAPGGGCGPPSHLG*RGDPRLAALCRGSS
Trigger: GCTGGAGCCCCGGCACAAGGCAGCCAGCCGAGGGTCGCCGCGCCAGCCAAGGTGGGATGGGGGCCCACAGCCACCGCCCGGCGCCCGAGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS GCA 90 bp GCTGCGGCGCGCCGCGCGGCCCAAGCTCTTTCCTCCGGCTCCTCCTaGGGCTCCTGGCCTTCCTCCGCGTTCGCAGTCGCAGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: AAARRAAQALSSGSS*GSWPSSAFAVAAAA
Trigger: GGCGGCGGCTGCGACTGCGAACGCGGAGGAAGGCCAGGAGCCGCAGGAGGAGCCGGAGGAAAGAGCTTGGGCCGCGCGGCGCGCCGCAGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AGGGCATCGGGCCGCCGCACAGGGTCGCTGGCCCGCCTGGCTCCGCCGCCTGGAGGGCCGGGGTTCACGTaGTGGGTGCTGTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: RASGRRTGSLARLAPPPGGPGFT*WVLWKR
Trigger: GCGCTTCCACAGCACCCACAACGTGAACCCCGGCCC...TCCAGGCGGCGGAGCCAGGCGGGCCAGCGACCCTGTGCGGCGGCCCGATGCCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CCGCGTGGCCGTGGCCATAGGTCGGCCCGTCGCTGCCACGCCGCGGCCCCAGTGGGGAGGGGAGGCAGCTaGGTGTTCCGCGTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: PRGRGHRSARRCHAAAPVGRGGS*VFRVCG
Trigger: TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCC...CACTGGGGCCGCGGCGTGGCAGCGACGGGCCGACCTATGGCCACGGCCACGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GTTGAGCAGCCCGGAGCCGCCGCTGCACTGGCTGGCCTCGCTCGAGCGCCGCGAGTGGCTGCCGCGTACTaGGCCCGCAGGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: VEQPGAAAALAGLARAPRVAAAY*ARRLYC
Trigger: GCAGTACAGCCTGCGGGCCAAGTACGCGGCAGCCAC...TCGCGGCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTCCGGGCTGCTCAAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CCGCGTGGCCGTGGCCATAGGTCGGCCCGTCGCTGCCACGCCGCGGCCCCAGTGCGGAGGTGCACGTCATaGCGCTGCTTCTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: PRGRGHRSARRCHAAAPVRRCTS*RCFLVT
Trigger: CGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCG...CACTGGGGCCGCGGCGTGGCAGCGACGGGCCGACCTATGGCCACGGCCACGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCCGGTGGCTGCCGCGTACTaGGCCCGCAGGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: WSPRSRTAPTAAGSAAAPVAAAY*ARRLYC
Trigger: GCAGTACAGCCTGCGGGCCAAGTACGCGGCAGCCAC...CGGGGCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CGTCTGAGAGTGGGGAGATGGACAGCGCCCGCTTGCGGCTCAGGCGGGGCGTCAATGGACAGCGCCCGCTaGCGGCTCAGGCGGGGCGTC +
Preference number: 5 (lower is better)
Translates to: RLRVGRWTAPACGSGGASMDSAR*RLRRGV
Trigger: GACGCCCCGCCTGAGCCGCAAGCGGGCGCTGTCCAT...TGACGCCCCGCCTGAGCCGCAAGCGGGCGCTGTCCATCTCCCCACTCTCAGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CAA 90 bp AGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTAACCGGCCCCCATCCCACCTaGGCTGGCGCGGCGACCCTC +
Preference number: 5 (lower is better)
Translates to: RLGPGCTLTPRGLSPSLTGPHPT*AGAATL
Trigger: GAGGGTCGCCGCGCCAGCCAAGGTGGGATGGGGGCC...GGTTAGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AGTCGTGGAGATGGGGTGCGCTGGCAGCGCCCCCGCTCTGCATCAGCAGGTCCCGGGCAGGGGGCCTCCTaGGGCAGCTACCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SRGDGVRWQRPRSASAGPGQGAS*GSYRCC
Trigger: GCAGCAGCGGTAGCTGCCCAAGGAGGCCCCCTGCCC...GGGACCTGCTGATGCAGAGCGGGGGCGCTGCCAGCGCACCCCATCTCCACGACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CAA 90 bp CAGGGCGGCAGCGGGCCGGGGTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCGTGGCTGCCGCGTACTaGGCCCGCAGGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: QGGSGPGFTLWVLWKRCTVAAAY*ARRLYC
Trigger: GCAGTACAGCCTGCGGGCCAAGTACGCGGCAGCCAC...GGTGCAGCGCTTCCACAGCACCCACAACGTGAACCCCGGCCCGCTGCCGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCCCCGGCGCGGTCCGAGGCGTaGGAGAAGGCTTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: WSPRSRTAPTAAGSAAAPARSEA*EKALLQ
Trigger: CTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCGC...CGGGGCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGGCGCGGTCCGAGGCGTaGGAGAAGGCTTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: RQRGGRPQALRLGLDLAAARSEA*EKALLQ
Trigger: CTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCGC...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GAGGCGGCTGGGGAGGCACCGACCCCATGTTGCCCATCGCTCCCTTGGGCACAGGGGCCGGGGTTCACGTaGTGGGTGCTGTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: EAAGEAPTPCCPSLPWAQGPGFT*WVLWKR
Trigger: GCGCTTCCACAGCACCCACAACGTGAACCCCGGCCC...CTGTGCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCCTCCCCAGCCGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp CGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCCACTGGCGTGCGCCTaGATGTACTGCACCACGTCG +
Preference number: 5 (lower is better)
Translates to: RQRGGRPQALRLGLDLAAPLACA*MYCTTS
Trigger: CGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGG...CGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CCTGAGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTGGCACCGACCCCATGTaGCCCATCGCTCCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PEAGPRVHPHSSRPQSIPGTDPM*PIAPLG
Trigger: GCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCC...AGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCTCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp CCGCCGTCGGTGCTCGGGTGGCTCTGCAGGCGGAGGCCTCGCCTGTCGGCACAGGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PPSVLGWLCRRRPRLSAQVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...CTGTGCCGACAGGCGAGGCCTCCGCCTGCAGAGCCACCCGAGCACCGACGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCGTGCGATTCTGGTGCTaGGCGCGGTCCGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGVRFWC*ARSEAL
Trigger: CAACGCCTCGGACCGCGCCAAGCACCAGAATCGCAC...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCCCATCGGGCCTGTTaGGGGCTCCATGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGPHRAC*GLHEAR
Trigger: CCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGGG...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS CCA 90 bp GGGTGGCAATCCGAGAGAGACAAAAGTTTGCCTCTAGCACGCAGGTaGCCTCTCGGGCGCCGGGCGGTGGCTGTGGGCCCCCATCCCACC +
Preference number: 5 (lower is better)
Translates to: GWQSERDKSLPLARR*PLGRRAVAVGPHPT
Trigger: GGTGGGATGGGGGCCCACAGCCACCGCCCGGCGCCCGAGAGGCCACCTGCGTGCTAGAGGCAAACTTTTGTCTCTCTCGGATTGCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCTGGGTGGGCGTGGCATaGATGGAGGTGAGGGCCATG +
Preference number: 5 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGWVGVA*MEVRAM
Trigger: CATGGCCCTCACCTCCATCAATGCCACGCCCACCCA...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CGCGCCGTCCACTCCTGCCGCCACGGCCTCCATCGCCACGTTCTCGCTGATGCTTGGGTGGGCGTGGCATaGATGGAGGTGAGGGCCATG +
Preference number: 5 (lower is better)
Translates to: RAVHSCRHGLHRHVLADAWVGVA*MEVRAM
Trigger: CATGGCCCTCACCTCCATCAATGCCACGCCCACCCA...AGCATCAGCGAGAACGTGGCGATGGAGGCCGTGGCGGCAGGAGTGGACGGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCGCGCGGTCCGAGGCGTaGGAGAAGGCTTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSARSEA*EKALLQ
Trigger: CTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCGC...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGCAGCTCCCGAGGTTCTCCAGGCCTCCATCCTGTTCGTACATGTGGATCTGGCTGCGCCGGCGTGAGGTaGAGCAGCCCGGAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: GSSRGSPGLHPVRTCGSGCAGVR*SSPEPP
Trigger: CGGCGGCTCCGGGCTGCTCAACCTCACGCCGGCGCA...GCCAGATCCACATGTACGAACAGGATGGAGGCCTGGAGAACCTCGGGAGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp GTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGACTCACTGCTCTGCTTTGCGCCGGCGTGAGGTaGAGCAGCCCGGAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: VNGDRVDGAADGRLTALLCAGVR*SSPEPP
Trigger: CGGCGGCTCCGGGCTGCTCAACCTCACGCCGGCGCA...AAGCAGAGCAGTGAGTCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TCTCCCAGGCTCCCGGGCCCCGTCCCCGGCATCTCCACGCCACTGTCATTGTTGCAGCTGGGGGTGGACTaGGCCATAGCAGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: SPRLPGPVPGISTPLSLLQLGVD*AIAGMG
Trigger: CCCCATGCCTGCTATGGCCAAGTCCACCCCCAGCTG...CAACAATGACAGTGGCGTGGAGATGCCGGGGACGGGGCCCGGGAGCCTGGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp AGCATGGTCACCTCGCTCGCGGACAGCTCCGACAGCCGCGGGTTCGGCAGCAGCTCCCCGACAGCCATGTaGCTGATGCCTGCGGGGATG +
Preference number: 5 (lower is better)
Translates to: SMVTSLADSSDSRGFGSSSPTAM*LMPAGM
Trigger: CATCCCCGCAGGCATCAGCAACATGGCTGTCGGGGA...GCTGCTGCCGAACCCGCGGCTGTCGGAGCTGTCCGCGAGCGAGGTGACCATGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp GAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGCCGCCGCACAGGGTCGCTATCATGTTCAGGAACTaGCTCTCCTCGGCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: EALHPRQGQGIGPPHRVAIMFRN*LSSARL
Trigger: CAGCCTCGCCGAGGAGAGCAAGTTCCTGAACATGAT...AGCGACCCTGTGCGGCGGCCCGATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CCAGACACCTGGCCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCATCCAGGATCCCACTTTaGGCTTCTTGCTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: PDTWPCVSARGEAGRRPSSRIPL*ASCFSE
Trigger: CTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGA...TGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGGCCAGGTGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR CAA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTGCGCGGTCCGAGGCGTaGGAGAAGGCTTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: AGGAVAALLQLAQHGHLAARSEA*EKALLQ
Trigger: CTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCGC...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGCTGTCCCCATTCTCTTaGAGCAGCGGTGTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: GEAAWCSACVESARPMSRLSPFS*SSGVRR
Trigger: CCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAG...CCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGGAGAGGGGAAGGGCACACCCACATGAGCCGTGTCCAGACACCTGGCCCTGCGCCGGAGCTCTCGGTCTaGATGGCTCTGACGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GRGEGHTHMSRVQTPGPAPELSV*MALTCR
Trigger: CCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGG...CGCAGGGCCAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTTCCCCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR CAA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTCCGGAGCTCTCGGTCTaGATGGCTCTGACGTGCAGG +
Preference number: 5 (lower is better)
Translates to: AGGAVAALLQLAQHGHLAPELSV*MALTCR
Trigger: CCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGG...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CGCTGGCCGTGCAGCCCCGGGCTGGGTAGTCTGGGGTTGTCAGAGAAGCCAGTGCCGGAGCTCTCGGTCTaGATGGCTCTGACGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RWPCSPGLGSLGLSEKPVPELSV*MALTCR
Trigger: CCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGG...CACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CATAGGGGCGGAGGGGCCCACGTTGGAGTCCGCAGCCACCATCCTGCGCTGGCCATGGTGGTCATGTGTTaGCGCAGCTGGAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: HRGGGAHVGVRSHHPALAMVVMC*RSWRPP
Trigger: TGGTGGCCTCCAGCTGCGCAAACACATGACCACCAT...GGCCAGCGCAGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCCTATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGATGGTGGTCATGTGTTaGCGCAGCTGGAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: PGGEAAWCSACVESARPMMVVMC*RSWRPP
Trigger: TGGTGGCCTCCAGCTGCGCAAACACATGACCACCAT...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCGGGAGGGGAGGCAGCTaGGTGTTCCGCGTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: VHVVGAVEALHPRQGQGIGRGGS*VFRVCG
Trigger: TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCC...GATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CGCTGGCCGTGCAGCCCCGGGCTGGGTAGTCTGGGGTTGTCAGAGAAGCCAGTGCCACTGGCGTGCGCCTaGATGTACTGCACCACGTCG +
Preference number: 5 (lower is better)
Translates to: RWPCSPGLGSLGLSEKPVPLACA*MYCTTS
Trigger: CGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGG...CACTGGCTTCTCTGACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GCTGGACTGACACAGCCCGGAGCTCTCGGTCTTGATGGCTCTGACGTGCAGGCAGCGGAGGGGCCCACGTaGGAGTCCGCAGCCACCATC +
Preference number: 5 (lower is better)
Translates to: AGLTQPGALGLDGSDVQAAEGPT*ESAATI
Trigger: GATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGC...TGCCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGGGCTGTGTCAGTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAGGAGCGGAGGGGCCCACGTaGGAGTCCGCAGCCACCATC +
Preference number: 5 (lower is better)
Translates to: LRVHSAPGARASRSSCSGAEGPT*ESAATI
Trigger: GATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGC...TCCTGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GTTGAGCAGCCCGGAGCCGCCGCTGCACTGGCTGGCCTCGCTCGAGCGCCGCGAACAGGCATGTTATTTTaGTTCAGGCTGGAGGGCGCC +
Preference number: 5 (lower is better)
Translates to: VEQPGAAAALAGLARAPRTGMLF*FRLEGA
Trigger: GGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGT...TCGCGGCGCTCGAGCGAGGCCAGCCAGTGCAGCGGCGGCTCCGGGCTGCTCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCGGCACCGACCCCATGTaGCCCATCGCTCCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCGTDPM*PIAPLG
Trigger: GCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCC...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CAA 90 bp GCTCCTGCGTCAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTCTCTGCTTGTTCTGGTaGGTGTCACTCAGACAGTTG +
Preference number: 5 (lower is better)
Translates to: APASAPEGRPAAGPQARSLCLFW*VSLRQL
Trigger: CAACTGTCTGAGTGACACCAACCAGAACAAGCAGAG...AGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTGACGCAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000452692.5
CDS-3UTR CAA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGGAGGTGCACGTCATaGCGCTGCTTCTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPRRCTS*RCFLVT
Trigger: CGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCG...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TCTCCCAGGCTCCCGGGCCCCGTCCCCGGCATCTCCACGCCACTGTCATTGTTGCGGAGGTGCACGTCATaGCGCTGCTTCTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: SPRLPGPVPGISTPLSLLRRCTS*RCFLVT
Trigger: CGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCG...CAACAATGACAGTGGCGTGGAGATGCCGGGGACGGGGCCCGGGAGCCTGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AGGCTGGGCCCCGGGTGCACCCTCACTCCTCGAGGCCTCAGTCCATCCCTAACCACGCCACTGTCATTGTaGGGGGCACTGCCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: RLGPGCTLTPRGLSPSLTTPLSL*GALPRG
Trigger: TCCTCTGGGCAGTGCCCCCAACAATGACAGTGGCGT...GGTTAGGGATGGACTGAGGCCTCGAGGAGTGAGGGTGCACCCGGGGCCCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTACGCCACTGTCATTGTaGGGGGCACTGCCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPTPLSL*GALPRG
Trigger: TCCTCTGGGCAGTGCCCCCAACAATGACAGTGGCGT...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGGGGAGGGGAGGCAGCTaGGTGTTCCGCGTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: RLRAGLTVPILFEQRCAEGRGGS*VFRVCG
Trigger: TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCC...CTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGAGGGCCGGGGTTCACGTaGTGGGTGCTGTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: DLAALVNGDRVDGAADGRGPGFT*WVLWKR
Trigger: GCGCTTCCACAGCACCCACAACGTGAACCCCGGCCC...TCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGGAGGGGCCCACGTaGGAGTCCGCAGCCACCATC +
Preference number: 5 (lower is better)
Translates to: SEKPVLSVGYTCPVPSSRAEGPT*ESAATI
Trigger: GATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGC...TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCCAGCTGGGGGTGGACTaGGCCATAGCAGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCQLGVD*AIAGMG
Trigger: CCCCATGCCTGCTATGGCCAAGTCCACCCCCAGCTG...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CAA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCCCCCATCGGGCCTGTTaGGGGCTCCATGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGPHRAC*GLHEAR
Trigger: CCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGGG...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp CGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCAGGTGCTGGACACCTGGTaGACCCCTGGTGAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: RTVARVLAKGRLLLHHRQVLDTW*TPGEGK
Trigger: CTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCAC...CTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp ACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCATCTGAAGCGGCCATaGCGCAACAACCCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: TSREGRQLGVPRVWSRPGHLKRP*RNNPSS
Trigger: GCTTGAGGGGTTGTTGCGCAATGGCCGCTTCAGATG...GCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CAGCGCCAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTTCCCCGACAGCCATGTaGCTGATGCCTCATTCCACT +
Preference number: 5 (lower is better)
Translates to: QRQRGGRPQALRLGLDLASPTAM*LMPHST
Trigger: AGTGGAATGAGGCATCAGCAACATGGCTGTCGGGGA...AGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTGGCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000452692.5
CDS GCA 90 bp GAGATGCTGCGGCACTCCTTGGGCAGCTACCGCTGCTGCTGCCGCTaGAGCCACCACCAAAGGAGAGGCCTTTTTACCCGGGTCGGGGAA +
Preference number: 5 (lower is better)
Translates to: EMLRHSLGSYRCCCR*SHHQRRGLFTRVGE
Trigger: TTCCCCGACCCGGGTAAAAAGGCCTCTCCTTTGGTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCCCAAGGAGTGCCGCAGCATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360874.10
ENST00000361492.9
ENST00000418323.6
ENST00000452319.6
ENST00000472722.5
ENST00000482119.6
CDS-3UTR CAA 90 bp CCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGTCCAGGATCCCACTTTaGGCTTCTTGCTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: PGGEAAWCSACVESARPMSRIPL*ASCFSE
Trigger: CTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGA...CATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CGGGCTGGAGAAACGGGACACGTCCACGGGGTTGAGGTAGTCGTGGAGATGGGGTGGGTGGGCGTGGCATaGATGGAGGTGAGGGCCATG +
Preference number: 5 (lower is better)
Translates to: RAGETGHVHGVEVVVEMGWVGVA*MEVRAM
Trigger: CATGGCCCTCACCTCCATCAATGCCACGCCCACCCA...CCCCATCTCCACGACTACCTCAACCCCGTGGACGTGTCCCGTTTCTCCAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433812.1
CDS-3UTR CAA 90 bp TCTCCCAGGCTCCCGGGCCCCGTCCCCGGCATCTCCACGCCACTGTCATTGTTGGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SPRLPGPVPGISTPLSLLVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...CAACAATGACAGTGGCGTGGAGATGCCGGGGACGGGGCCCGGGAGCCTGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGGAGAGGGGAAGGGCACACCCACATGAGCCGTGTCCAGACACCTGGCCCTGCGGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRGEGHTHMSRVQTPGPAVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...CGCAGGGCCAGGTGTCTGGACACGGCTCATGTGGGTGTGCCCTTCCCCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
CDS-3UTR CAA 90 bp CACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGTGCGCCTTGATGTACTGTCATTGCGCTGCTTCTaGGTGACGTGGGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: HLPGALVQSATGVRLDVLSLRCF*VTWASG
Trigger: CCCAGATGCCCACGTCACCAAGAAGCAGCGCAATGA...CAGTACATCAAGGCGCACGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GTTCACGTTGTGGGTGCTGTGGAAGCGCTGCACCCGCGGCAGGGACAGGGCATCCGGAGGTGCACGTCATaGCGCTGCTTCTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: VHVVGAVEALHPRQGQGIRRCTS*RCFLVT
Trigger: CGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCG...GATGCCCTGTCCCTGCCGCGGGTGCAGCGCTTCCACAGCACCCACAACGTGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGTGCTCTCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTCTGTCCCCATTCTCTTaGAGCAGCGGTGTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: GALWAARLRAGLTVPILFLSPFS*SSGVRR
Trigger: CCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAG...AAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGAGAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TCTCCCAGGCTCCCGGGCCCCGTCCCCGGCATCTCCACGCCACTGTCATTGTTGATGGTGGTCATGTGTTaGCGCAGCTGGAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: SPRLPGPVPGISTPLSLLMVVMC*RSWRPP
Trigger: TGGTGGCCTCCAGCTGCGCAAACACATGACCACCAT...CAACAATGACAGTGGCGTGGAGATGCCGGGGACGGGGCCCGGGAGCCTGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CTCCGGGTGCACTCAGCACCAGGCGCTCGGGCCTCTAGGTCATCATGTTCAGGAGGGAGGGGAGGCAGCTaGGTGTTCCGCGTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: LRVHSAPGARASRSSCSGGRGGS*VFRVCG
Trigger: TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCC...TCCTGAACATGATGACCTAGAGGCCCGAGCGCCTGGTGCTGAGTGCACCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCAGTTCCCTGTGGCGATaGCCCATCGTGGTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: EASAFRGIHLPGALVQSASSLWR*PIVVGS
Trigger: TGACCCCACCACGATGGGCAATCGCCACAGGGAACT...GGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp GTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCACTGGCGCATCTGAAGCGGCCATaGCGCAACAACCCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: VLSVGYTCPVPSSRAPLAHLKRP*RNNPSS
Trigger: GCTTGAGGGGTTGTTGCGCAATGGCCGCTTCAGATG...CGCCAGTGGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CCGTGCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCATCTGAAGCGGCCATaGCGCAACAACCCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: PCWWSCRGAPAAGSAWSPHLKRP*RNNPSS
Trigger: GCTTGAGGGGTTGTTGCGCAATGGCCGCTTCAGATG...AGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS GCA 90 bp GGGTCGGGGAAGCCAGCGGCCTCCAGGATCCCACTTTTGGCTTCTTaGTTCTCGGAGGCAGTGGCTGAGGCAGACGTCTCCATCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GSGKPAASRIPLLAS*FSEAVAEADVSISA
Trigger: GGCTGAGATGGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGAGGCCGCTGGCTTCCCCGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000418323.6
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
ENST00000472722.5
ENST00000482119.6
CDS GCA 90 bp TGGCAAGAGATGCTGCGGCACTCCTTGGGCAGCTACCGCTGCTGCTaGCGCTGCAGCCACCACCAAAGGAGAGGCCTTTTTACCCGGGTC +
Preference number: 5 (lower is better)
Translates to: WQEMLRHSLGSYRCC*RCSHHQRRGLFTRV
Trigger: GACCCGGGTAAAAAGGCCTCTCCTTTGGTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCCCAAGGAGTGCCGCAGCATCTCTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360874.10
ENST00000361492.9
ENST00000418323.6
ENST00000452319.6
ENST00000472722.5
ENST00000482119.6
CDS-3UTR CAA 90 bp GAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGCGCCCCCACTTTTGGCTTCTaGCTTCTCGGAGGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: EASAFRGIHLPGALVQSAPTFGF*LLGGSG
Trigger: GCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGG...GGCGCTCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGAGCGCGGTCCGAGGCGTaGGAGAAGGCTTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: LEPVHGGHVFAQLEATSGARSEA*EKALLQ
Trigger: CTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCGC...TCCGCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCACTCGGAGGTGCACGTCATaGCGCTGCTTCTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: QDSWNPQALGSDDPSGCTRRCTS*RCFLVT
Trigger: CGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCG...AGTGCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGCTGTCCCCATTCTCTTaGAGCAGCGGTGTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: PQALRLGLDLAALVNGDRLSPFS*SSGVRR
Trigger: CCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAG...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCCCGGAGCTCTCGGTCTaGATGGCTCTGACGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RAPLACALMYCTTSSGSTPELSV*MALTCR
Trigger: CCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGG...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TCTCCCAGGCTCCCGGGCCCCGTCCCCGGCATCTCCACGCCACTGTCATTGTTGTTGAGCTTCTCCTTCTaGAGCTGCTCGAACCGGTGC +
Preference number: 5 (lower is better)
Translates to: SPRLPGPVPGISTPLSLLLSFSF*SCSNRC
Trigger: GCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAA...CAACAATGACAGTGGCGTGGAGATGCCGGGGACGGGGCCCGGGAGCCTGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGAGGGAGGGGAGGCAGCTaGGTGTTCCGCGTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: SEKPVLSVGYTCPVPSSRGRGGS*VFRVCG
Trigger: TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCC...TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGCTACATTCTACATGCAAACACTGTAAACACGGTCTGGAGAGGCCAGGGCAGCTGCGCCGGCGTGAGGTaGAGCAGCCCGGAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: GYILHANTVNTVWRGQGSCAGVR*SSPEPP
Trigger: CGGCGGCTCCGGGCTGCTCAACCTCACGCCGGCGCA...GCTGCCCTGGCCTCTCCAGACCGTGTTTACAGTGTTTGCATGTAGAATGTAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCGTGGCTGCCGCGTACTaGGCCCGCAGGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFVAAAY*ARRLYC
Trigger: GCAGTACAGCCTGCGGGCCAAGTACGCGGCAGCCAC...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GTAGGCCTTGCGGACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCAGTGCTGGACACCTGGTaGACCCCTGGTGAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: VGLADCSPGTGQRQASAAVLDTW*TPGEGK
Trigger: CTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCAC...TGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTCCGCAAGGCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGTCCCCGACAGCCATGTaGCTGATGCCTGCGGGGATG +
Preference number: 5 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLSPTAM*LMPAGM
Trigger: CATCCCCGCAGGCATCAGCAACATGGCTGTCGGGGA...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp ATGGAGCCACTTCCCGGGAGGGGAGGCAGCTTGGTGTTCCGCGTGTGTGGAGTCCCCACTTTTGGCTTCTaGCTTCTCGGAGGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: MEPLPGRGGSLVFRVCGVPTFGF*LLGGSG
Trigger: GCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGG...GACTCCACACACGCGGAACACCAAGCTGCCTCCCCTCCCGGGAAGTGGCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GCTGGTGGAGCTGTCGCGGCGCTCCTGCAGCTGGCTCAGCATGGTCACCTCGCTTCCAGGATCCCACTTTaGGCTTCTTGCTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: AGGAVAALLQLAQHGHLASRIPL*ASCFSE
Trigger: CTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGA...AGCGAGGTGACCATGCTGAGCCAGCTGCAGGAGCGCCGCGACAGCTCCACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TTTGAGCAGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGTGCGATTCTGGTGCTaGGCGCGGTCCGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: FEQRCAEVHVIALLLGDVVRFWC*ARSEAL
Trigger: CAACGCCTCGGACCGCGCCAAGCACCAGAATCGCAC...CACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GTAGTCTGGGGTTGTCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGGTGCGATTCTGGTGCTaGGCGCGGTCCGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: VVWGCQRSQCFPWDTPARVRFWC*ARSEAL
Trigger: CAACGCCTCGGACCGCGCCAAGCACCAGAATCGCAC...CCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCAGACTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGACTGTCCCCATTCTCTTaGAGCAGCGGTGTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: LEPVHGGHVFAQLEATSGLSPFS*SSGVRR
Trigger: CCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAG...TCCGCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AGCTGGGAGTCCACAGTGCTGGACACCTGGTTGACCCCTGGTGAGGGCAAGGGCATGGTGGTCATGTGTTaGCGCAGCTGGAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: SWESTVLDTWLTPGEGKGMVVMC*RSWRPP
Trigger: TGGTGGCCTCCAGCTGCGCAAACACATGACCACCAT...GCCCTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCACTGTGGACTCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp GGTGCTCTCTGGGCCGCCAGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTTTGAGCTTCTCCTTCTaGAGCTGCTCGAACCGGTGC +
Preference number: 5 (lower is better)
Translates to: GALWAARLRAGLTVPILFLSFSF*SCSNRC
Trigger: GCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAA...AAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCTGGCGGCCCAGAGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CAGAGGGGAGGCCGGCCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTCATGAGCAGGAATCCTaGAGTGACTTGAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QRGGRPQALRLGLDLAALHEQES*SDLSFS
Trigger: GGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATG...AAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGGCCGGCCTCCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCGGAGTTCCCTGTGGCGATaGCCCATCGTGGTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: VRLDVLHHVVWKHQVVLRSSLWR*PIVVGS
Trigger: TGACCCCACCACGATGGGCAATCGCCACAGGGAACT...CCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGGGCACCGACCCCATGTaGCCCATCGCTCCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLGTDPM*PIAPLG
Trigger: GCCCAAGGGAGCGATGGGCAACATGGGGTCGGTGCC...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS CCA 90 bp CGGCCTCCAGGATCCCACTTTTGGCTTCTTGCTTCTCGGAGGCAGTaGCTGAGGCAGACGTCTCCATCTCAGCCGCTCATCGTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: RPPGSHFWLLASRRQ*LRQTSPSQPLIVLG
Trigger: ACCCAGGACGATGAGCGGCTGAGATGGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000418323.6
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
ENST00000472722.5
ENST00000482119.6
CDS-3UTR CAA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RAPLACALMYCTTSSGSTVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGAGGATACCAGGCATGCACACTGTGGCTTGGTGGAGAACACTGGGCTGCTGGTGCGCGGTCCGAGGCGTaGGAGAAGGCTTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: GGYQACTLWLGGEHWAAGARSEA*EKALLQ
Trigger: CTGCAACAAAGCCTTCTCCAACGCCTCGGACCGCGC...ACCAGCAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATGCCTGGTATCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGTGCGATTCTGGTGCTaGGCGCGGTCCGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: NVSREEAGTARSCKHQRLVRFWC*ARSEAL
Trigger: CAACGCCTCGGACCGCGCCAAGCACCAGAATCGCAC...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CCCCAAGTTCCCTGTGGCGATTGCCCATCGTGGTGGGGTCAGGTGCCACTTCTGTCATTGCGCTGCTTCTaGGTGACGTGGGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: PQVPCGDCPSWWGQVPLLSLRCF*VTWASG
Trigger: CCCAGATGCCCACGTCACCAAGAAGCAGCGCAATGA...CAGAAGTGGCACCTGACCCCACCACGATGGGCAATCGCCACAGGGAACTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp GACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGATCATTGCGCTGCTTCTaGGTGACGTGGGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: DLAALVNGDRVDGAADGRSLRCF*VTWASG
Trigger: CCCAGATGCCCACGTCACCAAGAAGCAGCGCAATGA...TCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGATGACGATGTGGCTGCCGCGTACTaGGCCCGCAGGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: LVSGQSLMCWDAASPDDDVAAAY*ARRLYC
Trigger: GCAGTACAGCCTGCGGGCCAAGTACGCGGCAGCCAC...ATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCCATGTTGCTGCAGGATaGGGGGAACTGGTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: RAPLACALMYCTTSSGSTHVAAG*GELVEG
Trigger: GCCCTCAACCAGTTCCCCCAATCCTGCAGCAACATG...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCCCCAGATGCCCTGGCTaGGCTGGCATGTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFPRCPG*AGMLLQ
Trigger: CTGCAGCAACATGCCAGCCAAGCCAGGGCATCTGGG...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp GGAGGCTGGGGCTCAGAGCACCCGAGAACAAACTCGAGTGATCGCCATCATCCACCCAGATGCCCTGGCTaGGCTGGCATGTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GGWGSEHPRTNSSDRHHPPRCPG*AGMLLQ
Trigger: CTGCAGCAACATGCCAGCCAAGCCAGGGCATCTGGG...TGGATGATGGCGATCACTCGAGTTTGTTCTCGGGTGCTCTGAGCCCCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS TCA 90 bp CTCCAGGATCCCACTTTTGGCTTCTTGCTTCTCGGAGGCAGTGGCTaGGGCAGACGTCTCCATCTCAGCCGCTCATCGTCCTGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LQDPTFGFLLLGGSG*GRRLHLSRSSSWVA
Trigger: TGCCACCCAGGACGATGAGCGGCTGAGATGGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000418323.6
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
ENST00000472722.5
ENST00000482119.6
CDS-3UTR CAA 90 bp TCAGAGAAGCCAGTGCTTTCCGTGGGATACACCTGCCCGGTGCCCTCGTCCAGACCCACTTTTGGCTTCTaGCTTCTCGGAGGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: SEKPVLSVGYTCPVPSSRPTFGF*LLGGSG
Trigger: GCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGG...TCTGGACGAGGGCACCGGGCAGGTGTATCCCACGGAAAGCACTGGCTTCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CCGCAGGCCCTCAGGCTCGGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: PQALRLGLDLAALVNGDRDSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...CCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACCGAGCCTGAGGGCCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TTTGAGCAGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGCTGTCCCCATTCTCTTaGAGCAGCGGTGTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: FEQRCAEVHVIALLLGDVLSPFS*SSGVRR
Trigger: CCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAG...CACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGCCGGAGCTCTCGGTCTaGATGGCTCTGACGTGCAGG +
Preference number: 5 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLPELSV*MALTCR
Trigger: CCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGG...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCACGCCACTGTCATTGTaGGGGGCACTGCCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFTPLSL*GALPRG
Trigger: TCCTCTGGGCAGTGCCCCCAACAATGACAGTGGCGT...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCTGCGCCGGCGTGAGGTaGAGCAGCCCGGAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTCAGVR*SSPEPP
Trigger: CGGCGGCTCCGGGCTGCTCAACCTCACGCCGGCGCA...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAAGGGCCGGGGTTCACGTaGTGGGTGCTGTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: QSQTRLYGVEEPALPNLEGPGFT*WVLWKR
Trigger: GCGCTTCCACAGCACCCACAACGTGAACCCCGGCCC...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGGAATCATGTTCAGGAACTaGCTCTCCTCGGCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LEPVHGGHVFAQLEATSGIMFRN*LSSARL
Trigger: CAGCCTCGCCGAGGAGAGCAAGTTCCTGAACATGAT...TCCGCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCAGGTCGTCCTCCGGATCATGTTCAGGAACTaGCTCTCCTCGGCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: VRLDVLHHVVWKHQVVLRIMFRN*LSSARL
Trigger: CAGCCTCGCCGAGGAGAGCAAGTTCCTGAACATGAT...CCGGAGGACGACCTGGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGATGGACAGCGCCCGCTaGCGGCTCAGGCGGGGCGTC +
Preference number: 5 (lower is better)
Translates to: DSALRSRRASSTKPGIRMMDSAR*RLRRGV
Trigger: GACGCCCCGCCTGAGCCGCAAGCGGGCGCTGTCCAT...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AGACAAGACAGCTGGAATCCCCAGGCTCTGGGCAGCGATGACCCCTCCGGGTGCGCCCAGATGACGATGTaGGCCTTGTCCTCAAACTCT +
Preference number: 5 (lower is better)
Translates to: RQDSWNPQALGSDDPSGCAQMTM*ALSSNS
Trigger: AGAGTTTGAGGACAAGGCCAACATCGTCATCTGGGC...GCACCCGGAGGGGTCATCGCTGCCCAGAGCCTGGGGATTCCAGCTGTCTTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS CCA 90 bp TGGTACCTTCCTTCCTGGTGTCGCATGTCAATCGGTAGGGGCGCATaGAATGGTGGCAAGAGATGCTGCGGCACTCCTTGGGCAGCTACC +
Preference number: 5 (lower is better)
Translates to: WYLPSWCRMSIGRGA*NGGKRCCGTPWAAT
Trigger: GGTAGCTGCCCAAGGAGTGCCGCAGCATCTCTTGCCACCATTCCATGCGCCCCTACCGATTGACATGCGACACCAGGAAGGAAGGTACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360874.10
ENST00000361492.9
ENST00000418323.6
ENST00000452319.6
ENST00000472722.5
ENST00000482119.6
CDS-3UTR CAA 90 bp GACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGGCCGATCCAGGATCCCACTTTaGGCTTCTTGCTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: DLAALVNGDRVDGAADGRSRIPL*ASCFSE
Trigger: CTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGA...TCGGCCGTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGCTTGGCTGGCATGTTGCTGCAGGATTGGGGGAACTGGTTGAGGGCCCCACTGTCCAGGATCCCACTTTaGGCTTCTTGCTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: GLAGMLLQDWGNWLRAPLSRIPL*ASCFSE
Trigger: CTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGA...CAGTGGGGCCCTCAACCAGTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GLDLAALVNGDRVDGAADVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GVGPAHEQESLSDLSFSFVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...GAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GACTGTAGCCCGGGTACTGGCCAAAGGCAGGCTTCTGCTGCACCACCGCCAGGTCTCTGCTTGTTCTGGTaGGTGTCACTCAGACAGTTG +
Preference number: 5 (lower is better)
Translates to: DCSPGTGQRQASAAPPPGLCLFW*VSLRQL
Trigger: CAACTGTCTGAGTGACACCAACCAGAACAAGCAGAG...ACCTGGCGGTGGTGCAGCAGAAGCCTGCCTTTGGCCAGTACCCGGGCTACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341310.10
ENST00000445186.5
CDS-3UTR CAA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLDSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CTGCTCGAACCGGTGCATGGTGGTCATGTGTTTGCGCAGCTGGAGGCCACCAGCGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: LLEPVHGGHVFAQLEATSDSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...GCTGGTGGCCTCCAGCTGCGCAAACACATGACCACCATGCACCGGTTCGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCGTGCGATTCTGGTGCTaGGCGCGGTCCGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKAVRFWC*ARSEAL
Trigger: CAACGCCTCGGACCGCGCCAAGCACCAGAATCGCAC...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACATGGTGGTCATGTGTTaGCGCAGCTGGAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: GLDLAALVNGDRVDGAADMVVMC*RSWRPP
Trigger: TGGTGGCCTCCAGCTGCGCAAACACATGACCACCAT...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AGGCTCCGTGCCGGCCTCACTGTCCCCATTCTCTTTGAGCAGCGGTGTGCGGAGCATGAGCAGGAATCCTaGAGTGACTTGAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RLRAGLTVPILFEQRCAEHEQES*SDLSFS
Trigger: GGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATG...CTCCGCACACCGCTGCTCAAAGAGAATGGGGACAGTGAGGCCGGCACGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TTCATTTGCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGGGCCGGGGTTCACGTaGTGGGTGCTGTGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: FICSWPCLWTEFDVLGRSGPGFT*WVLWKR
Trigger: GCGCTTCCACAGCACCCACAACGTGAACCCCGGCCC...GCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGCAAATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGGCTTGGCTGGCATGTaGCTGCAGGATTGGGGGAAC +
Preference number: 5 (lower is better)
Translates to: NVSREEAGTARSCKHQRLGLAGM*LQDWGN
Trigger: GTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCC...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CAA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTCCCAGATGCCCTGGCTaGGCTGGCATGTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCPRCPG*AGMLLQ
Trigger: CTGCAGCAACATGCCAGCCAAGCCAGGGCATCTGGG...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CAA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTTCCCCGACAGCCATGTaGCTGATGCCTGCGGGGATG +
Preference number: 5 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCSPTAM*LMPAGM
Trigger: CATCCCCGCAGGCATCAGCAACATGGCTGTCGGGGA...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CAA 90 bp AGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGGGCATCTTCCCCGACAGCCATGTaGCTGATGCCTCATTCCACT +
Preference number: 5 (lower is better)
Translates to: SGVRRCTSLRCFLVTWASSPTAM*LMPHST
Trigger: AGTGGAATGAGGCATCAGCAACATGGCTGTCGGGGA...AGATGCCCACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438299.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AATGTCAGCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGTCATTGCGCTGCTTCTaGGTGACGTGGGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: NVSREEAGTARSCKHQRLSLRCF*VTWASG
Trigger: CCCAGATGCCCACGTCACCAAGAAGCAGCGCAATGA...CAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGCTGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGATGACGATCTGTCCCCATTCTCTTaGAGCAGCGGTGTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: LVSGQSLMCWDAASPDDDLSPFS*SSGVRR
Trigger: CCTCCGCACACCGCTGCTCAAAGAGAATGGGGACAG...ATCGTCATCTGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AGAGCGCCACTGGCGTGCGCCTTGATGTACTGCACCACGTCGTCTGGAAGCACCCATGAGCAGGAATCCTaGAGTGACTTGAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RAPLACALMYCTTSSGSTHEQES*SDLSFS
Trigger: GGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATG...GGTGCTTCCAGACGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGGCGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AGCTTGGTGTTCCGCGTGTGTGGAGTCGGCCCGGCCCATGAGCAGGAATCCTTGCATGAGCAGGAATCCTaGAGTGACTTGAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SLVFRVCGVGPAHEQESLHEQES*SDLSFS
Trigger: GGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATG...CAAGGATTCCTGCTCATGGGCCGGGCCGACTCCACACACGCGGAACACCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGGGAGGGGAGGCAGCTaGGTGTTCCGCGTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRGRGGS*VFRVCG
Trigger: TCCACACACGCGGAACACCAAGCTGCCTCCCCTCCC...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp ACCACCTCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCACCACTGGCGTGCGCCTaGATGTACTGCACCACGTCG +
Preference number: 5 (lower is better)
Translates to: TTSASCLQSSLSRSSLRSPLACA*MYCTTS
Trigger: CGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGG...TGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGAGGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp ACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCGGAGGGGCCCACGTaGGAGTCCGCAGCCACCATC +
Preference number: 5 (lower is better)
Translates to: TRLYGVEEPALPNLESECAEGPT*ESAATI
Trigger: GATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGC...ACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGACAGCTGGGGGTGGACTaGGCCATAGCAGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRQLGVD*AIAGMG
Trigger: CCCCATGCCTGCTATGGCCAAGTCCACCCCCAGCTG...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CAA 90 bp GTCGGCCCGGCCCATGAGCAGGAATCCTTGAGTGACTTGAGCTTCTCCTTCTTGCATCTGAAGCGGCCATaGCGCAACAACCCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: VGPAHEQESLSDLSFSFLHLKRP*RNNPSS
Trigger: GCTTGAGGGGTTGTTGCGCAATGGCCGCTTCAGATG...CAAGAAGGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATGGGCCGGGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GCAGTTGGCCTTGTCTCTGGACAGAGTTTGATGTGCTGGGACGCAGCGAGCCCAGGGCAGCTTCTGGGCTaGCCCCAAGGAGTACATTTT +
Preference number: 5 (lower is better)
Translates to: AVGLVSGQSLMCWDAASPGQLLG*PQGVHF
Trigger: AAAATGTACTCCTTGGGGCAAGCCCAGAAGCTGCCC...TGGGCTCGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGACAAGGCCAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp TCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCAGCCCCACTTTTGGCTTCTaGCTTCTCGGAGGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: SASCLQSSLSRSSLRSASPTFGF*LLGGSG
Trigger: GCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGG...GCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGTCTTGACCTTGCTGCGCTTGTGAATGGCGACAGGGTTGACGGTGCTGCTGACGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: GLDLAALVNGDRVDGAADDSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...GTCAGCAGCACCGTCAACCCTGTCGCCATTCACAAGCGCAGCAAGGTCAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341310.10
ENST00000433812.1
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGGTGCGATTCTGGTGCTaGGCGCGGTCCGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: DSALRSRRASSTKPGIRMVRFWC*ARSEAL
Trigger: CAACGCCTCGGACCGCGCCAAGCACCAGAATCGCAC...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TTTGAGCAGCGGTGTGCGGAGGTGCACGTCATTGCGCTGCTTCTTGGTGACGTGACAGGCATGTTATTTTaGTTCAGGCTGGAGGGCGCC +
Preference number: 5 (lower is better)
Translates to: FEQRCAEVHVIALLLGDVTGMLF*FRLEGA
Trigger: GGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGT...CACGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCGCACACCGCTGCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAAGGCTTGGCTGGCATGTaGCTGCAGGATTGGGGGAAC +
Preference number: 5 (lower is better)
Translates to: QSQTRLYGVEEPALPNLEGLAGM*LQDWGN
Trigger: GTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCC...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CAA 90 bp GCCGTGAAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCAGAGAGAGACAAAAGTTaGCCTCTAGCACGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: AVKKPEQRGPVSTKGWKAERDKS*PLARRW
Trigger: CCACCTGCGTGCTAGAGGCAAACTTTTGTCTCTCTC...TGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTTCACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCTGGGTGGGCGTGGCATaGATGGAGGTGAGGGCCATG +
Preference number: 5 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLWVGVA*MEVRAM
Trigger: CATGGCCCTCACCTCCATCAATGCCACGCCCACCCA...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGGCTGCCGTCAGGCCCTGGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: GLPSGPGVFGGKVGGRCIDSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...AATGCAACGTCCACCCACTTTACCACCAAAAACTCCAGGGCCTGACGGCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp TCACTGCTCTGCTTGTTCTGGTTGGTGTCACTCAGACAGTTGCTGCTGCTGCTGTCATTGCGCTGCTTCTaGGTGACGTGGGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: SLLCLFWLVSLRQLLLLLSLRCF*VTWASG
Trigger: CCCAGATGCCCACGTCACCAAGAAGCAGCGCAATGA...CAGCAGCAGCAGCAACTGTCTGAGTGACACCAACCAGAACAAGCAGAGCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TCAGCCTCCTGCTTACAGTCATCCCTGTCCAGATCTTCCTTGAGGTCAGCCAGCTTGAGCTTCTCCTTCTaGAGCTGCTCGAACCGGTGC +
Preference number: 5 (lower is better)
Translates to: SASCLQSSLSRSSLRSASLSFSF*SCSNRC
Trigger: GCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAA...GCTGGCTGACCTCAAGGAAGATCTGGACAGGGATGACTGTAAGCAGGAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCCCCCATCGGGCCTGTTaGGGGCTCCATGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTPHRAC*GLHEAR
Trigger: CCTGGCTTCATGGAGCCCCAAACAGGCCCGATGGGG...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CAA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTATCATGTTCAGGAACTaGCTCTCCTCGGCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCIMFRN*LSSARL
Trigger: CAGCCTCGCCGAGGAGAGCAAGTTCCTGAACATGAT...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp ATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCCAGGCCCTGGAGTTTTaGGTGGTAAAGTGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: IHLDGLPVPDSALRSRRAQALEF*VVKWVD
Trigger: GTCCACCCACTTTACCACCAAAAACTCCAGGGCCTG...GGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS CCA 90 bp GTGGCTGAGGCAGACGTCTCCATCTCAGCCGCTCATCGTCCTGGGTaGCAATCCTTGCTCTTTGATGTGTCGGTAAAGCAGCACATGTAT +
Preference number: 5 (lower is better)
Translates to: VAEADVSISAAHRPG*QSLLFDVSVKQHMY
Trigger: ATACATGTGCTGCTTTACCGACACATCAAAGAGCAAGGATTGCCACCCAGGACGATGAGCGGCTGAGATGGAGACGTCTGCCTCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGACCCACTTTTGGCTTCTaGCTTCTCGGAGGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRPTFGF*LLGGSG
Trigger: GCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGG...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp ATGAAAAGGTTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGGAGCTCTCGGTCTaGATGGCTCTGACGTGCAGG +
Preference number: 5 (lower is better)
Translates to: MKRFGVCVCVCVCVCVCVPELSV*MALTCR
Trigger: CCTGCACGTCAGAGCCATCAAGACCGAGAGCTCCGG...CACACACACACACACACACACACACACACACACACACACCCCAAACCTTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCACGCCACTGTCATTGTaGGGGGCACTGCCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLTPLSL*GALPRG
Trigger: TCCTCTGGGCAGTGCCCCCAACAATGACAGTGGCGT...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp ACCCACAGCGGCTCCAGCAGCCCCGAGGTATTTAGAAACAAGTCTTCTTTTCAGATGGTGGTCATGTGTTaGCGCAGCTGGAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: THSGSSSPEVFRNKSSFQMVVMC*RSWRPP
Trigger: TGGTGGCCTCCAGCTGCGCAAACACATGACCACCAT...CTGAAAAGAAGACTTGTTTCTAAATACCTCGGGGCTGCTGGAGCCGCTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp TTGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGCATGGTGGTCTTGAGCTTCTCCTTCTaGAGCTGCTCGAACCGGTGC +
Preference number: 5 (lower is better)
Translates to: LSDLSFSFLSCSNRCMVVLSFSF*SCSNRC
Trigger: GCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAA...GACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTACAGGCATGTTATTTTaGTTCAGGCTGGAGGGCGCC +
Preference number: 5 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCTGMLF*FRLEGA
Trigger: GGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGT...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp ATGAAAAGGTTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCTGGACACCTGGTaGACCCCTGGTGAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: MKRFGVCVCVCVCVCVCVVLDTW*TPGEGK
Trigger: CTTGCCCTCACCAGGGGTCAACCAGGTGTCCAGCAC...CACACACACACACACACACACACACACACACACACACACCCCAAACCTTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp ATTCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCATCATGTTCAGGAACTaGCTCTCCTCGGCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: IPLHRHVIFVQAGGRPKAIMFRN*LSSARL
Trigger: CAGCCTCGCCGAGGAGAGCAAGTTCCTGAACATGAT...GGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TGTCCTCAAACTCTCCTAAGAAGTTCCTCATTAAGGCCAAGGTCACAGTCAGAGTGGGTGGGCGTGGCATaGATGGAGGTGAGGGCCATG +
Preference number: 5 (lower is better)
Translates to: CPQTLLRSSSLRPRSQSEWVGVA*MEVRAM
Trigger: CATGGCCCTCACCTCCATCAATGCCACGCCCACCCA...CTCTGACTGTGACCTTGGCCTTAATGAGGAACTTCTTAGGAGAGTTTGAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp TCCACTGCACAGGCATGTTATTTTTGTTCAGGCTGGAGGGCGCCCCAAAGCCTAGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: STAQACYFCSGWRAPQSLDSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...TAGGCTTTGGGGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGTGCAGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CATATACACTTGGATGGGCTGCCAGTCCCAGACTCGGCTTTACGGAGTAGAAGATTGAGCTTCTCCTTCTaGAGCTGCTCGAACCGGTGC +
Preference number: 5 (lower is better)
Translates to: HIHLDGLPVPDSALRSRRLSFSF*SCSNRC
Trigger: GCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAA...TCTTCTACTCCGTAAAGCCGAGTCTGGGACTGGCAGCCCATCCAAGTGTATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTTGGGTGGACGTTGCATaGGAGAAACAGGATTGGGTA +
Preference number: 5 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCWVDVA*EKQDWV
Trigger: TACCCAATCCTGTTTCTCCAATGCAACGTCCACCCA...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AAGAAGCCGGAACAGCGCGGTCCTGTAAGCACCAAAGGCTGGAAAGCACTGTGTGGCTTTCATTTGCAGTaGGCCTTGTCTCTGGACAGA +
Preference number: 5 (lower is better)
Translates to: KKPEQRGPVSTKGWKALCGFHLQ*ALSLDR
Trigger: TCTGTCCAGAGACAAGGCCAACTGCAAATGAAAGCC...ACACAGTGCTTTCCAGCCTTTGGTGCTTACAGGACCGCGCTGTTCCGGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp GTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCTTTTCCTTCCAAGTTGGGTGGGCGTGGCATaGATGGAGGTGAGGGCCATG +
Preference number: 5 (lower is better)
Translates to: VRLHRGIQVDQEFLFLPSWVGVA*MEVRAM
Trigger: CATGGCCCTCACCTCCATCAATGCCACGCCCACCCA...ACTTGGAAGGAAAAGGAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp ATGAAAAGGTTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTCACTCAGACAGTaGCTGCTGCTGCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: MKRFGVCVCVCVCVCVCVVSLRQ*LLLLSW
Trigger: CCAGCTCAGCAGCAGCAGCAACTGTCTGAGTGACAC...CACACACACACACACACACACACACACACACACACACACCCCAAACCTTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp CAGTCCCAGACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAACTCTGCTTGTTCTGGTaGGTGTCACTCAGACAGTTG +
Preference number: 5 (lower is better)
Translates to: QSQTRLYGVEEPALPNLELCLFW*VSLRQL
Trigger: CAACTGTCTGAGTGACACCAACCAGAACAAGCAGAG...TTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTCTGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TTGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGCATGGTGGTCCTCTGCTTGTTCTGGTaGGTGTCACTCAGACAGTTG +
Preference number: 5 (lower is better)
Translates to: LSDLSFSFLSCSNRCMVVLCLFW*VSLRQL
Trigger: CAACTGTCTGAGTGACACCAACCAGAACAAGCAGAG...GACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTGGAGAAACAGGATTGGGTTCATTGCGCTGCTTCTaGGTGACGTGGGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: GVFGGKVGGRCIGETGLGSLRCF*VTWASG
Trigger: CCCAGATGCCCACGTCACCAAGAAGCAGCGCAATGA...ACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp TTGAGTGACTTGAGCTTCTCCTTCTTGAGCTGCTCGAACCGGTGCATGGTGGTCCATGAGCAGGAATCCTaGAGTGACTTGAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LSDLSFSFLSCSNRCMVVHEQES*SDLSFS
Trigger: GGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATG...GACCACCATGCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAAGTCACTCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCCACTGGCGTGCGCCTaGATGTACTGCACCACGTCG +
Preference number: 5 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFPLACA*MYCTTS
Trigger: CGACGTGGTGCAGTACATCAAGGCGCACGCCAGTGG...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp ACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTCATGTTGCTGCAGGATaGGGGGAACTGGTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: TRLYGVEEPALPNLESECHVAAG*GELVEG
Trigger: GCCCTCAACCAGTTCCCCCAATCCTGCAGCAACATG...ACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CAA 90 bp ATGAAAAGGTTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATCTGAAGCGGCCATaGCGCAACAACCCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: MKRFGVCVCVCVCVCVCVHLKRP*RNNPSS
Trigger: GCTTGAGGGGTTGTTGCGCAATGGCCGCTTCAGATG...CACACACACACACACACACACACACACACACACACACACCCCAAACCTTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCGTCTCTGGACAGAGTTaGATGTGCTGGGACGCAGCG +
Preference number: 5 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTVSGQS*MCWDAA
Trigger: CGCTGCGTCCCAGCACATCAAACTCTGTCCAGAGAC...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS TCA 90 bp CTCCATCTCAGCCGCTCATCGTCCTGGGTGGCAATCCTTGCTCTTTaGTGTGTCGGTAAAGCAGCACATGTATTCTTGATCACAGATGCG +
Preference number: 5 (lower is better)
Translates to: LHLSRSSSWVAILAL*CVGKAAHVFLITDA
Trigger: CGCATCTGTGATCAAGAATACATGTGCTGCTTTACCGACACATCAAAGAGCAAGGATTGCCACCCAGGACGATGAGCGGCTGAGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCACGCCACTGTCATTGTaGGGGGCACTGCCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFTPLSL*GALPRG
Trigger: TCCTCTGGGCAGTGCCCCCAACAATGACAGTGGCGT...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGCTACAGGCATGTTATTTTaGTTCAGGCTGGAGGGCGCC +
Preference number: 5 (lower is better)
Translates to: RLYGVEEPALPNLESECATGMLF*FRLEGA
Trigger: GGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGT...AGCACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCTCCAGGATCCCACTTTaGGCTTCTTGCTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTSRIPL*ASCFSE
Trigger: CTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGA...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp GGAGTTTTTGGTGGTAAAGTGGGTGGACGTTGCATTGGAGAAACAGGATTGGGTTCCAGGATCCCACTTTaGGCTTCTTGCTTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: GVFGGKVGGRCIGETGLGSRIPL*ASCFSE
Trigger: CTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGA...ACCCAATCCTGTTTCTCCAATGCAACGTCCACCCACTTTACCACCAAAAACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp ACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTGACTCACTGCTCTGCTaGTTCTGGTTGGTGTCACTC +
Preference number: 5 (lower is better)
Translates to: TRLYGVEEPALPNLESECDSLLC*FWLVSL
Trigger: GAGTGACACCAACCAGAACAAGCAGAGCAGTGAGTC...ACATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp TTAGAGACCTCAAGAGTTAGGCTTCATAGAGGAATTCAGGTGGACCAGGAATTCCATGTTGCTGCAGGATaGGGGGAACTGGTTGAGGGC +
Preference number: 5 (lower is better)
Translates to: LETSRVRLHRGIQVDQEFHVAAG*GELVEG
Trigger: GCCCTCAACCAGTTCCCCCAATCCTGCAGCAACATG...GAATTCCTGGTCCACCTGAATTCCTCTATGAAGCCTAACTCTTGAGGTCTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CAA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCTGCTGTTTGGCAAGGTaGCCACACATTCCCCATGAA +
Preference number: 5 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLCCLAR*PHIPHE
Trigger: TTCATGGGGAATGTGTGGCAACCTTGCCAAACAGCA...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp ACCCACAGCGGCTCCAGCAGCCCCGAGGTATTTAGAAACAAGTCTTCTTTTCAGATGACGATGTTGGCCTaGTCCTCAAACTCTCCTAAG +
Preference number: 5 (lower is better)
Translates to: THSGSSSPEVFRNKSSFQMTMLA*SSNSPK
Trigger: CTTAGGAGAGTTTGAGGACAAGGCCAACATCGTCAT...CTGAAAAGAAGACTTGTTTCTAAATACCTCGGGGCTGCTGGAGCCGCTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp GACTCGGCTTTACGGAGTAGAAGAGCCAGCTCTACCAAACCTGGAATCAGAATGTTCCCTGGCTTTCATTaGCAGTTGGCCTTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: DSALRSRRASSTKPGIRMFPGFH*QLALSL
Trigger: CAGAGACAAGGCCAACTGCAAATGAAAGCCAGGGAA...CATTCTGATTCCAGGTTTGGTAGAGCTGGCTCTTCTACTCCGTAAAGCCGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp TCGAATGCACCAAATTTACTGCCCAGGTTCTCATTAACTACTGTCAAGGGGGAATTGAGCTTCTCCTTCTaGAGCTGCTCGAACCGGTGC +
Preference number: 5 (lower is better)
Translates to: SNAPNLLPRFSLTTVKGELSFSF*SCSNRC
Trigger: GCACCGGTTCGAGCAGCTCAAGAAGGAGAAGCTCAA...TTCCCCCTTGACAGTAGTTAATGAGAACCTGGGCAGTAAATTTGGTGCATTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp GTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTGGCAAGGCATGCACACTGTGGCTaGGTGGAGAACACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: VYSGMSSVQNIYRLGLARHAHCG*VENTGL
Trigger: CAGCCCAGTGTTCTCCACCAAGCCACAGTGTGCATG...CCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AACCTTCTCTTACAACATCTGTCATCTGAAGCGGCCATTGCGCAACAACCCCTCATTTCCAGGTGGGTCTaGGTCACACTGAACAGGAAA +
Preference number: 5 (lower is better)
Translates to: NLLLQHLSSEAAIAQQPLISRWV*VTLNRK
Trigger: TTTCCTGTTCAGTGTGACCAAGACCCACCTGGAAAT...GAGGGGTTGTTGCGCAATGGCCGCTTCAGATGACAGATGTTGTAAGAGAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCCGGAGGTGCACGTCATaGCGCTGCTTCTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFRRCTS*RCFLVT
Trigger: CGTCACCAAGAAGCAGCGCAATGACGTGCACCTCCG...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp ACCCACAGCGGCTCCAGCAGCCCCGAGGTATTTAGAAACAAGTCTTCTTTTCAGTTTGGAGATATAAATTaGGCTGGACGACTCACCTAC +
Preference number: 5 (lower is better)
Translates to: THSGSSSPEVFRNKSSFQFGDIN*AGRLTY
Trigger: GTAGGTGAGTCGTCCAGCCAAATTTATATCTCCAAA...CTGAAAAGAAGACTTGTTTCTAAATACCTCGGGGCTGCTGGAGCCGCTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp GTTCCAAATTCCATTTCCAGGTGGGTCTTGGTCACACTGAACAGGAAAATTCAAACAGGCATGTTATTTTaGTTCAGGCTGGAGGGCGCC +
Preference number: 5 (lower is better)
Translates to: VPNSISRWVLVTLNRKIQTGMLF*FRLEGA
Trigger: GGCGCCCTCCAGCCTGAACAAAAATAACATGCCTGT...TTGAATTTTCCTGTTCAGTGTGACCAAGACCCACCTGGAAATGGAATTTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAGGCTTGGCTGGCATGTaGCTGCAGGATTGGGGGAAC +
Preference number: 5 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQGLAGM*LQDWGN
Trigger: GTTCCCCCAATCCTGCAGCAACATGCCAGCCAAGCC...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CAA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAAGTTCCCTGTGGCGATaGCCCATCGTGGTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQSSLWR*PIVVGS
Trigger: TGACCCCACCACGATGGGCAATCGCCACAGGGAACT...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000445186.5
CDS-3UTR CAA 90 bp CCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAAACCCAAATGCTCCCTACCATTGGAGAAACAGGATaGGGTAAACACGCAACTTCC +
Preference number: 5 (lower is better)
Translates to: PEQSIQYSIQIQTQMLPTIGETG*GKHATS
Trigger: GGAAGTTGCGTGTTTACCCAATCCTGTTTCTCCAAT...GGTAGGGAGCATTTGGGTTTGAATCTGAATGCTATACTGGATACTCTGCTCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp ATGAAAAGGTTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGAATATATACAGGTaGGGACTGGCAAGGGAAATC +
Preference number: 5 (lower is better)
Translates to: MKRFGVCVCVCVCVCVCVQNIYR*GLAREI
Trigger: GATTTCCCTTGCCAGTCCCAACCTGTATATATTCTG...CACACACACACACACACACACACACACACACACACACACCCCAAACCTTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp GTATATTCAGGGATGTCTTCTGTACAGAATATATACAGGTTGGGACTGGCAAGGCATGAGCAGGAATCCTaGAGTGACTTGAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VYSGMSSVQNIYRLGLARHEQES*SDLSFS
Trigger: GGAGAAGCTCAAGTCACTCAAGGATTCCTGCTCATG...CCTTGCCAGTCCCAACCTGTATATATTCTGTACAGAAGACATCCCTGAATATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS-3UTR CAA 90 bp AGAATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCCTCTGCTTGTTCTGGTaGGTGTCACTCAGACAGTTG +
Preference number: 5 (lower is better)
Translates to: RIKSSSFRSRVSSIAFRFLCLFW*VSLRQL
Trigger: CAACTGTCTGAGTGACACCAACCAGAACAAGCAGAG...GAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS-3UTR CAA 90 bp AATAAAAAGCTCATCTTTCCGGAGCAGAGTATCCAGTATAGCATTCAGATTCAACTCTGCTTGTTCTGGTaGGTGTCACTCAGACAGTTG +
Preference number: 5 (lower is better)
Translates to: NKKLIFPEQSIQYSIQIQLCLFW*VSLRQL
Trigger: CAACTGTCTGAGTGACACCAACCAGAACAAGCAGAG...TTGAATCTGAATGCTATACTGGATACTCTGCTCCGGAAAGATGAGCTTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS CCA 90 bp TTTGGTTGGTTACAACCAGTGGTTCTCAGCTACACAGGACCTACCTaGATAGACCCTTACTGTTATTATTACAATAGATCATATATGGTT +
Preference number: 5 (lower is better)
Translates to: FGWLQPVVLSYTGPT*IDPYCYYYNRSYMV
Trigger: AACCATATATGATCTATTGTAATAATAACAGTAAGGGTCTATCCAGGTAGGTCCTGTGTAGCTGAGAACCACTGGTTGTAACCAACCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472722.5
CDS CCA 72 bp CACGCAGGTGGCCTCTCGGGCGCCGGGCGGTGGCTGTaGGCCCCCATCCCACCTTGGCTGGCGCGGCGACCC +
Preference number: 6 (lower is better)
Translates to: HAGGLSGAGRWL*APIPPWLARRP
Trigger: GGGTCGCCGCGCCAGCCAAGGTGGGATGGGGGCCCACAGCCACCGCCCGGCGCCCGAGAGGCCACCTGCGTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS CAA 90 bp TGGCCTCTCGGGCGCCGGGCGGTGGCTGTGGGCCCCCATCCCACCTaGGCTGGCGCGGCGACCCTCGGCTGGCTGCCTTGTGCCGGGGCT +
Preference number: 6 (lower is better)
Translates to: WPLGRRAVAVGPHPT*AGAATLGWLPCAGA
Trigger: AGCCCCGGCACAAGGCAGCCAGCCGAGGGTCGCCGCGCCAGCCAAGGTGGGATGGGGGCCCACAGCCACCGCCCGGCGCCCGAGAGGCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS GCA 72 bp ATCCCACCTTGGCTGGCGCGGCGACCCTCGGCTGGCTaGCTTGTGCCGGGGCTCCAGCCAGCCGGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: IPPWLARRPSAG*LVPGLQPAGAG
Trigger: CCCCGCCCCGGCTGGCTGGAGCCCCGGCACAAGGCAGCCAGCCGAGGGTCGCCGCGCCAGCCAAGGTGGGAT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS CCA 72 bp GGCGCCGGGCGGTGGCTGTGGGCCCCCATCCCACCTTaGCTGGCGCGGCGACCCTCGGCTGGCTGCCTTGTG +
Preference number: 6 (lower is better)
Translates to: GAGRWLWAPIPP*LARRPSAGCLV
Trigger: CACAAGGCAGCCAGCCGAGGGTCGCCGCGCCAGCCAAGGTGGGATGGGGGCCCACAGCCACCGCCCGGCGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS CAA 72 bp GGGCGCCGGGCGGTGGCTGTGGGCCCCCATCCCACCTaGGCTGGCGCGGCGACCCTCGGCTGGCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: GRRAVAVGPHPT*AGAATLGWLPC
Trigger: ACAAGGCAGCCAGCCGAGGGTCGCCGCGCCAGCCAAGGTGGGATGGGGGCCCACAGCCACCGCCCGGCGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS CCA 72 bp CCCGCTTGCGGCTCAGGCGGGGCGTCACCCGCGGGCTaGAGAAACGGGACACCGTGCACACCGTGGACAGAA +
Preference number: 6 (lower is better)
Translates to: PACGSGGASPAG*RNGTPCTPWTE
Trigger: TTCTGTCCACGGTGTGCACGGTGTCCCGTTTCTCCAGCCCGCGGGTGACGCCCCGCCTGAGCCGCAAGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360874.10
CDS CCA 72 bp TCCGAGAGAGACAAAAGTTTGCCTCTAGCACGCAGGTaGCCTCTCGGGCGCCGGGCGGTGGCTGTGGGCCCC +
Preference number: 6 (lower is better)
Translates to: SERDKSLPLARR*PLGRRAVAVGP
Trigger: GGGGCCCACAGCCACCGCCCGGCGCCCGAGAGGCCACCTGCGTGCTAGAGGCAAACTTTTGTCTCTCTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361492.9
CDS GCA 72 bp CAAGAGATGCTGCGGCACTCCTTGGGCAGCTACCGCTaGTGCTGCCGCTGCAGCCACCACCAAAGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: QEMLRHSLGSYR*CCRCSHHQRRG
Trigger: GCCTCTCCTTTGGTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCCCAAGGAGTGCCGCAGCATCTCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360874.10
ENST00000361492.9
ENST00000418323.6
ENST00000452319.6
ENST00000472722.5
ENST00000482119.6
CDS CCA 72 bp GGTCGGGGAAGCCAGCGGCCTCCAGGATCCCACTTTTaGCTTCTTGCTTCTCGGAGGCAGTGGCTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: GRGSQRPPGSHF*LLASRRQWLRQ
Trigger: CTGCCTCAGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGAGGCCGCTGGCTTCCCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000418323.6
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452319.6
ENST00000452692.5
ENST00000472722.5
ENST00000482119.6
CDS GCA 72 bp ATGCTGCGGCACTCCTTGGGCAGCTACCGCTGCTGCTaGCGCTGCAGCCACCACCAAAGGAGAGGCCTTTTT +
Preference number: 6 (lower is better)
Translates to: MLRHSLGSYRCC*RCSHHQRRGLF
Trigger: AAAAAGGCCTCTCCTTTGGTGGTGGCTGCAGCGGCAGCAGCAGCGGTAGCTGCCCAAGGAGTGCCGCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360874.10
ENST00000361492.9
ENST00000418323.6
ENST00000452319.6
ENST00000472722.5
ENST00000482119.6
CDS CAA 90 bp TTTTTACCCGGGTCGGGGAAGCCAGCGGCCTCCAGGATCCCACTTTaGGCTTCTTGCTTCTCGGAGGCAGTGGCTGAGGCAGACGTCTCC +
Preference number: 6 (lower is better)
Translates to: FLPGSGKPAASRIPL*ASCFSEAVAEADVS
Trigger: GGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGAGGCCGCTGGCTTCCCCGACCCGGGTAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000418323.6
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452319.6
ENST00000452692.5
ENST00000472722.5
ENST00000482119.6
CDS GCA 72 bp AAGCCAGCGGCCTCCAGGATCCCACTTTTGGCTTCTTaGTTCTCGGAGGCAGTGGCTGAGGCAGACGTCTCC +
Preference number: 6 (lower is better)
Translates to: KPAASRIPLLAS*FSEAVAEADVS
Trigger: GGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCCTGGAGGCCGCTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000418323.6
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452319.6
ENST00000452692.5
ENST00000472722.5
ENST00000482119.6
CDS GCA 72 bp TCAATCGGTAGGGGCGCATGGAATGGTGGCAAGAGATaGTGCGGCACTCCTTGGGCAGCTACCGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SIGRGAWNGGKR*CGTPWAATAAA
Trigger: AGCAGCAGCGGTAGCTGCCCAAGGAGTGCCGCAGCATCTCTTGCCACCATTCCATGCGCCCCTACCGATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360874.10
ENST00000361492.9
ENST00000418323.6
ENST00000452319.6
ENST00000472722.5
ENST00000482119.6
CDS TCA 72 bp CCCACTTTTGGCTTCTTGCTTCTCGGAGGCAGTGGCTaGGGCAGACGTCTCCATCTCAGCCGCTCATCGTCC +
Preference number: 6 (lower is better)
Translates to: PTFGFLLLGGSG*GRRLHLSRSSS
Trigger: GGACGATGAGCGGCTGAGATGGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000418323.6
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
ENST00000472722.5
ENST00000482119.6
CDS CCA 72 bp CCTTCCTGGTGTCGCATGTCAATCGGTAGGGGCGCATaGAATGGTGGCAAGAGATGCTGCGGCACTCCTTGG +
Preference number: 6 (lower is better)
Translates to: PSWCRMSIGRGA*NGGKRCCGTPW
Trigger: CCAAGGAGTGCCGCAGCATCTCTTGCCACCATTCCATGCGCCCCTACCGATTGACATGCGACACCAGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360874.10
ENST00000361492.9
ENST00000418323.6
ENST00000452319.6
ENST00000472722.5
ENST00000482119.6
CDS CCA 72 bp GGATCCCACTTTTGGCTTCTTGCTTCTCGGAGGCAGTaGCTGAGGCAGACGTCTCCATCTCAGCCGCTCATC +
Preference number: 6 (lower is better)
Translates to: GSHFWLLASRRQ*LRQTSPSQPLI
Trigger: GATGAGCGGCTGAGATGGAGACGTCTGCCTCAGCCACTGCCTCCGAGAAGCAAGAAGCCAAAAGTGGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000341310.10
ENST00000361492.9
ENST00000418323.6
ENST00000437950.5
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
ENST00000472722.5
ENST00000482119.6
CDS CCA 72 bp GCAGACGTCTCCATCTCAGCCGCTCATCGTCCTGGGTaGCAATCCTTGCTCTTTGATGTGTCGGTAAAGCAG +
Preference number: 6 (lower is better)
Translates to: ADVSISAAHRPG*QSLLFDVSVKQ
Trigger: CTGCTTTACCGACACATCAAAGAGCAAGGATTGCCACCCAGGACGATGAGCGGCTGAGATGGAGACGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341310.10
ENST00000418323.6
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS CAA 72 bp TCCATCTCAGCCGCTCATCGTCCTGGGTGGCAATCCTaGCTCTTTGATGTGTCGGTAAAGCAGCACATGTAT +
Preference number: 6 (lower is better)
Translates to: SISAAHRPGWQS*LFDVSVKQHMY
Trigger: ATACATGTGCTGCTTTACCGACACATCAAAGAGCAAGGATTGCCACCCAGGACGATGAGCGGCTGAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS TCA 72 bp AGCCGCTCATCGTCCTGGGTGGCAATCCTTGCTCTTTaGTGTGTCGGTAAAGCAGCACATGTATTCTTGATC +
Preference number: 6 (lower is better)
Translates to: SRSSSWVAILAL*CVGKAAHVFLI
Trigger: GATCAAGAATACATGTGCTGCTTTACCGACACATCAAAGAGCAAGGATTGCCACCCAGGACGATGAGCGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS CAA 72 bp AGCAGCACATGTATTCTTGATCACAGATGCGGTGCCTaGAACGTTTTAGACATCGCATCATCACTTTCTTTC +
Preference number: 6 (lower is better)
Translates to: SSTCILDHRCGA*NVLDIASSLSF
Trigger: GAAAGAAAGTGATGATGCGATGTCTAAAACGTTCAAGGCACCGCATCTGTGATCAAGAATACATGTGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5
CDS CCA 72 bp TTACAACCAGTGGTTCTCAGCTACACAGGACCTACCTaGATAGACCCTTACTGTTATTATTACAATAGATCA +
Preference number: 6 (lower is better)
Translates to: LQPVVLSYTGPT*IDPYCYYYNRS
Trigger: TGATCTATTGTAATAATAACAGTAAGGGTCTATCCAGGTAGGTCCTGTGTAGCTGAGAACCACTGGTTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472722.5
CDS GCA 72 bp ATCACTTTCTTTCACAGTCCTGTGTCTTTTCTTCTATaGATTTATAGCATTATTGTAGGAGTCCACGAACTT +
Preference number: 6 (lower is better)
Translates to: ITFFHSPVSFLL*IYSIIVGVHEL
Trigger: AAGTTCGTGGACTCCTACAATAATGCTATAAATGCATAGAAGAAAAGACACAGGACTGTGAAAGAAAGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341310.10
ENST00000438299.5
ENST00000445186.5
ENST00000452692.5