Pregenerated sensors for GKN2 (Homo sapiens)
Ensembl gene IDs: ENSG00000183607Ensembl transcript IDs: ENST00000328895.9, ENST00000481498.1
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATCATCCTAAACATGAATGTCTGCACAGATTGAAATTCCCAAGATaGCCAGGAGCCCAGCCTTTGCACAGCCTCCAGCACCGACATTAT | + |
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Preference number: 1 (lower is better) Translates to: NHPKHECLHRLKFPR*PGAQPLHSLQHRHY Trigger: ATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGCTCCTGGGCATCTTGGGAATTTCAATCTGTGCAGACATTCATGTTTAGGATGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR CCA 90 bp | TACCCAGATGAATCAGGGTTTTTACTCCCTGTCTGTAAGTCCGCTTaGCCTCCTCTTTCCTATACCAATTCTATTCTAGATCCTGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: YPDESGFLLPVCKSA*PPLSYTNSILDPES Trigger: GCTCTCAGGATCTAGAATAGAATTGGTATAGGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTAAAAACCCTGATTCATCTGGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR CCA 90 bp | AAGCAAACTGAACTGAGTACTGTTCCCATTTATTTGCATTTCACTTaGCACCCAACAGAGCACCTGGCACATAGTAGCTTTCAGAAAATA | + |
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Preference number: 1 (lower is better) Translates to: KQTELSTVPIYLHFT*HPTEHLAHSSFQKI Trigger: TATTTTCTGAAAGCTACTATGTGCCAGGTGCTCTGTTGGGTGCCAAGTGAAATGCAAATAAATGGGAACAGTACTCAGTTCAGTTTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR CAA 90 bp | TGTCTGCACAGATTGAAATTCCCAAGATGCCCAGGAGCCCAGCCTTaGCACAGCCTCCAGCACCGACATTATCTGGAAAAGGGAAAATTT | + |
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Preference number: 2 (lower is better) Translates to: CLHRLKFPRCPGAQP*HSLQHRHYLEKGKF Trigger: AAATTTTCCCTTTTCCAGATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGCTCCTGGGCATCTTGGGAATTTCAATCTGTGCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGCCTTTGCACAGCCTCCAGCACCGACATTATCTGGAAAAGGGAAAATTTCTGTTCCCATTTATTTaGATTTCACTTGGCACCCAA | + |
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Preference number: 2 (lower is better) Translates to: AQPLHSLQHRHYLEKGKFLFPFI*ISLGTQ Trigger: TTGGGTGCCAAGTGAAATGCAAATAAATGGGAACAG...AAATTTTCCCTTTTCCAGATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR-3UTR CCA 90 bp | GTTGTGTTCATCATCAGTTGGCCCGACCTCTTTCACTCTGGTTGCTCTGCCACACGAGTAGTTTTTCATTaGCATCCAGAAATCCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: VVFIISWPDLFHSGCSATRVVFH*HPEILY Trigger: GTAAAGGATTTCTGGATGCCAATGAAAAACTACTCG...TGTGGCAGAGCAACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR CAA 90 bp | AACTCTTCTTTATCTACCTTCCAGTACTCTGAGAAATTTCCTTTGTaGTGTTCATCATCAGTTGGCCCGACCTCTTTCACTCTGGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: NSSLSTFQYSEKFPL*CSSSVGPTSFTLVA Trigger: AGCAACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACAACAAAGGAAATTTCTCAGAGTACTGGAAGGTAGATAAAGAAGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR-3UTR CCA 90 bp | TTTTCACTTGTCAGCTTCTTCACTAGACTATGTGTTCCCTGGAGACGTTTAATTACCCAACAGAGCACCTaGCACATAGTAGCTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: FSLVSFFTRLCVPWRRLITQQST*HIVAFR Trigger: TCTGAAAGCTACTATGTGCCAGGTGCTCTGTTGGGT...AATTAAACGTCTCCAGGGAACACATAGTCTAGTGAAGAAGCTGACAAGTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR-3UTR CCA 90 bp | GAAATCCTTTACTCCATCCTCTCTTTTCACTTGTCAGCTTCTTCACTAGACTATTATTTGCATTTCACTTaGCACCCAACAGAGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: EILYSILSFHLSASSLDYYLHFT*HPTEHL Trigger: CAGGTGCTCTGTTGGGTGCCAAGTGAAATGCAAATA...ATAGTCTAGTGAAGAAGCTGACAAGTGAAAAGAGAGGATGGAGTAAAGGATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR CAA 90 bp | ATAAACTCTTCTTTATCTACCTTCCAGTACTCTGAGAAATTTCCTTaGTTGTGTTCATCATCAGTTGGCCCGACCTCTTTCACTCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: INSSLSTFQYSEKFP*LCSSSVGPTSFTLV Trigger: AACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACAACAAAGGAAATTTCTCAGAGTACTGGAAGGTAGATAAAGAAGAGTTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR-3UTR CAA 90 bp | ATGCCCAGGAGCCCAGCCTTTGCACAGCCTCCAGCACCGACATTATCTGGAAAAATCCTCTCTTTTCACTaGTCAGCTTCTTCACTAGAC | + |
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Preference number: 3 (lower is better) Translates to: MPRSPAFAQPPAPTLSGKILSFH*SASSLD Trigger: GTCTAGTGAAGAAGCTGACAAGTGAAAAGAGAGGAT...TTTTCCAGATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGCTCCTGGGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR-3UTR CAA 90 bp | TGTGTTCATCATCAGTTGGCCCGACCTCTTTCACTCTGGTTGCTCTGCCACATTACTGTTCCCATTTATTaGCATTTCACTTGGCACCCA | + |
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Preference number: 3 (lower is better) Translates to: CVHHQLARPLSLWLLCHITVPIY*HFTWHP Trigger: TGGGTGCCAAGTGAAATGCAAATAAATGGGAACAGT...AATGTGGCAGAGCAACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR GCA 72 bp | TTGGAAGTGCTGGTTGGCTCAATCCCAGTGATATTATaGCATTCTGTGTCAATGGCATACCTATGTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: LEVLVGSIPVIL*HSVSMAYLCAF Trigger: AAAGGCACATAGGTATGCCATTGACACAGAATGGCATAATATCACTGGGATTGAGCCAACCAGCACTTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR CCA 72 bp | GAATCAGGGTTTTTACTCCCTGTCTGTAAGTCCGCTTaGCCTCCTCTTTCCTATACCAATTCTATTCTAGAT | + |
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Preference number: 3 (lower is better) Translates to: ESGFLLPVCKSA*PPLSYTNSILD Trigger: ATCTAGAATAGAATTGGTATAGGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTAAAAACCCTGATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR-3UTR CAA 90 bp | TTTTTACTCCCTGTCTGTAAGTCCGCTTGGCCTCCTCTTTCCTATACCAATTCTGGCCCAGATGACTTTTaGCTACTTGAAATTCTTACA | + |
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Preference number: 3 (lower is better) Translates to: FLLPVCKSAWPPLSYTNSGPDDF*LLEILT Trigger: TGTAAGAATTTCAAGTAGCAAAAAGTCATCTGGGCC...AGAATTGGTATAGGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR-3UTR CAA 90 bp | AGTGATATTATGCCATTCTGTGTCAATGGCATACCTATGTGCCTTTATTTACTTTTATTTGCATTTCACTaGGCACCCAACAGAGCACCT | + |
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Preference number: 3 (lower is better) Translates to: SDIMPFCVNGIPMCLYLLLFAFH*APNRAP Trigger: AGGTGCTCTGTTGGGTGCCAAGTGAAATGCAAATAA...AAGTAAATAAAGGCACATAGGTATGCCATTGACACAGAATGGCATAATATCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR CCA 72 bp | TCACTTGTCAGCTTCTTCACTAGACTATGTGTTCCCTaGAGACGTTTAATTCATTTCTGTATTCCTAAAATT | + |
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Preference number: 3 (lower is better) Translates to: SLVSFFTRLCVP*RRLIHFCIPKI Trigger: AATTTTAGGAATACAGAAATGAATTAAACGTCTCCAGGGAACACATAGTCTAGTGAAGAAGCTGACAAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | ATGCCCAGGAGCCCAGCCTTTGCACAGCCTCCAGCACCGACATTATCTGGAAAAACCCAACAGAGCACCTaGCACATAGTAGCTTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: MPRSPAFAQPPAPTLSGKTQQST*HIVAFR Trigger: TCTGAAAGCTACTATGTGCCAGGTGCTCTGTTGGGT...TTTTCCAGATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGCTCCTGGGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | ATGCCCAGGAGCCCAGCCTTTGCACAGCCTCCAGCACCGACATTATCTGGAAAAGTGTTCATCATCAGTTaGCCCGACCTCTTTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: MPRSPAFAQPPAPTLSGKVFIIS*PDLFHS Trigger: AGAGTGAAAGAGGTCGGGCCAACTGATGATGAACAC...TTTTCCAGATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGCTCCTGGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR TCA 90 bp | TGTGTTCATCATCAGTTGGCCCGACCTCTTTCACTCTGGTTGCTCTGCCACATTCCAGAGGGTTGTACTTaGCCCAGGTGTATTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: CVHHQLARPLSLWLLCHIPEGCT*PRCICW Trigger: CCAGCAAATACACCTGGGTCAAGTACAACCCTCTGG...AATGTGGCAGAGCAACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR GCA 90 bp | ATGCCCAGGAGCCCAGCCTTTGCACAGCCTCCAGCACCGACATTATCTGGAAAAGGAGAGCACCCTGGATaGAATGTAGCCATGTTTATA | + |
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Preference number: 4 (lower is better) Translates to: MPRSPAFAQPPAPTLSGKGEHPG*NVAMFI Trigger: TATAAACATGGCTACATTGCATCCAGGGTGCTCTCC...TTTTCCAGATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGCTCCTGGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR CAA 72 bp | AGATTGAAATTCCCAAGATGCCCAGGAGCCCAGCCTTaGCACAGCCTCCAGCACCGACATTATCTGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: RLKFPRCPGAQP*HSLQHRHYLEK Trigger: CTTTTCCAGATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGCTCCTGGGCATCTTGGGAATTTCAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR TCA 90 bp | GATGAATCAGGGTTTTTACTCCCTGTCTGTAAGTCCGCTTGGCCTCCTCTTTCCGAGTTTCTCAATGGGTaGCCCAAGCAGGAACCAATC | + |
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Preference number: 4 (lower is better) Translates to: DESGFLLPVCKSAWPPLSEFLNG*PKQEPI Trigger: GATTGGTTCCTGCTTGGGTCACCCATTGAGAAACTC...GGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTAAAAACCCTGATTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR TCA 90 bp | ATGCCCAGGAGCCCAGCCTTTGCACAGCCTCCAGCACCGACATTATCTGGAAAATTGGCTCAATCCCAGTaGTATTATGCCATTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: MPRSPAFAQPPAPTLSGKLAQSQ*YYAILC Trigger: ACACAGAATGGCATAATATCACTGGGATTGAGCCAA...TTTTCCAGATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGCTCCTGGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | TGTGTTCATCATCAGTTGGCCCGACCTCTTTCACTCTGGTTGCTCTGCCACATTGTCTGTAAGTCCGCTTaGCCTCCTCTTTCCTATACC | + |
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Preference number: 4 (lower is better) Translates to: CVHHQLARPLSLWLLCHIVCKSA*PPLSYT Trigger: GGTATAGGAAAGAGGAGGCCAAGCGGACTTACAGAC...AATGTGGCAGAGCAACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR GCA 90 bp | GTTGTGTTCATCATCAGTTGGCCCGACCTCTTTCACTCTGGTTGCTCTGCCACACTCTTTCACTCTGGTTaGTCTGCCACATTTAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: VVFIISWPDLFHSGCSATLFHSG*SATFRN Trigger: GTTTCTAAATGTGGCAGAGCAACCAGAGTGAAAGAG...TGTGGCAGAGCAACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR CAA 72 bp | ACTCTGAGAAATTTCCTTTGTTGTGTTCATCATCAGTaGGCCCGACCTCTTTCACTCTGGTTGCTCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TLRNFLCCVHHQ*ARPLSLWLLCH Trigger: GTGGCAGAGCAACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACAACAAAGGAAATTTCTCAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR TCA 90 bp | TTTTTACTCCCTGTCTGTAAGTCCGCTTGGCCTCCTCTTTCCTATACCAATTCTAGAGGAGGGATGTTCTaGTGGTCCATCTTCAGGATA | + |
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Preference number: 4 (lower is better) Translates to: FLLPVCKSAWPPLSYTNSRGGMF*WSIFRI Trigger: TATCCTGAAGATGGACCATCAGAACATCCCTCCTCT...AGAATTGGTATAGGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | TTGCATTTCACTTGGCACCCAACAGAGCACCTGGCACATAGTAGCTTTCAGAAAGAGCATGATCCTGCATaGATGTTAATGATGGCGGTA | + |
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Preference number: 4 (lower is better) Translates to: LHFTWHPTEHLAHSSFQKEHDPA*MLMMAV Trigger: TACCGCCATCATTAACATCCATGCAGGATCATGCTC...TTTCTGAAAGCTACTATGTGCCAGGTGCTCTGTTGGGTGCCAAGTGAAATGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | AAACTGACAACTTTTGGAAGTGCTGGTTGGCTCAATCCCAGTGATATTATGCCATTCGGGAGAGCACCCTaGATGCAATGTAGCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: KLTTFGSAGWLNPSDIMPFGRAP*MQCSHV Trigger: AACATGGCTACATTGCATCCAGGGTGCTCTCCCGAA...TGGCATAATATCACTGGGATTGAGCCAACCAGCACTTCCAAAAGTTGTCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR CAA 72 bp | CCAAAGCAAACTGAACTGAGTACTGTTCCCATTTATTaGCATTTCACTTGGCACCCAACAGAGCACCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PKQTELSTVPIY*HFTWHPTEHLA Trigger: TGCCAGGTGCTCTGTTGGGTGCCAAGTGAAATGCAAATAAATGGGAACAGTACTCAGTTCAGTTTGCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR TCA 90 bp | TCACTTGGCACCCAACAGAGCACCTGGCACATAGTAGCTTTCAGAAAATATTTGATTGTCACTGTCTCCTaGACATTGCCACCATTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SLGTQQSTWHIVAFRKYLIVTVS*TLPPLL Trigger: CAACAATGGTGGCAATGTTCAGGAGACAGTGACAAT...CAAATATTTTCTGAAAGCTACTATGTGCCAGGTGCTCTGTTGGGTGCCAAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR TCA 90 bp | CTTGTCAGCTTCTTCACTAGACTATGTGTTCCCTGGAGACGTTTAATTCATTTCACCAATCCACGTCTTTaGTCAGAGACTCCAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LVSFFTRLCVPWRRLIHFTNPRL*SETPEG Trigger: ACCCTCTGGAGTCTCTGATCAAAGACGTGGATTGGT...GAAATGAATTAAACGTCTCCAGGGAACACATAGTCTAGTGAAGAAGCTGACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR GCA 90 bp | TGTGTTCATCATCAGTTGGCCCGACCTCTTTCACTCTGGTTGCTCTGCCACATTCAGCACCACCAGAAATaGCACAAGTATTTTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: CVHHQLARPLSLWLLCHIQHHQK*HKYFHF Trigger: AAAATGAAAATACTTGTGGCATTTCTGGTGGTGCTG...AATGTGGCAGAGCAACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR GCA 90 bp | CTTGTCAGCTTCTTCACTAGACTATGTGTTCCCTGGAGACGTTTAATTCATTTCCTGTCTCCTGAACATTaGCACCATTGTTGCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LVSFFTRLCVPWRRLIHFLSPEH*HHCCLG Trigger: GCCCAAGCAACAATGGTGGCAATGTTCAGGAGACAG...GAAATGAATTAAACGTCTCCAGGGAACACATAGTCTAGTGAAGAAGCTGACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | TTTTTACTCCCTGTCTGTAAGTCCGCTTGGCCTCCTCTTTCCTATACCAATTCTTATTTGCATTTCACTTaGCACCCAACAGAGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: FLLPVCKSAWPPLSYTNSYLHFT*HPTEHL Trigger: CAGGTGCTCTGTTGGGTGCCAAGTGAAATGCAAATA...AGAATTGGTATAGGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | TGTGTTCATCATCAGTTGGCCCGACCTCTTTCACTCTGGTTGCTCTGCCACATTCGAGTAGTTTTTCATTaGCATCCAGAAATCCTTTAC | + |
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Preference number: 4 (lower is better) Translates to: CVHHQLARPLSLWLLCHIRVVFH*HPEILY Trigger: GTAAAGGATTTCTGGATGCCAATGAAAAACTACTCG...AATGTGGCAGAGCAACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR GCA 90 bp | TTTTCATTGGCATCCAGAAATCCTTTACTCCATCCTCTCTTTTCACTTGTCAGCGACAACTTTTGGAAGTaGTGGTTGGCTCAATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: FSLASRNPLLHPLFSLVSDNFWK*WLAQSQ Trigger: CTGGGATTGAGCCAACCAGCACTTCCAAAAGTTGTC...GCTGACAAGTGAAAAGAGAGGATGGAGTAAAGGATTTCTGGATGCCAATGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | TTTTTACTCCCTGTCTGTAAGTCCGCTTGGCCTCCTCTTTCCTATACCAATTCTATTGTATCCCAAAGATaGTCAGCACCACCAGAAATG | + |
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Preference number: 4 (lower is better) Translates to: FLLPVCKSAWPPLSYTNSIVSQR*SAPPEM Trigger: CATTTCTGGTGGTGCTGACCATCTTTGGGATACAAT...AGAATTGGTATAGGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | TTTTTACTCCCTGTCTGTAAGTCCGCTTGGCCTCCTCTTTCCTATACCAATTCTGCCATTCTGTGTCAATaGCATACCTATGTGCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: FLLPVCKSAWPPLSYTNSAILCQ*HTYVPL Trigger: TAAAGGCACATAGGTATGCCATTGACACAGAATGGC...AGAATTGGTATAGGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | TACTCCCTGTCTGTAAGTCCGCTTGGCCTCCTCTTTCCTATACCAATTCTATTCAAAACTGACAACTTTTaGAAGTGCTGGTTGGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: YSLSVSPLGLLFPIPILFKTDNF*KCWLAQ Trigger: TTGAGCCAACCAGCACTTCCAAAAGTTGTCAGTTTT...GAATAGAATTGGTATAGGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR TCA 90 bp | AAACTGACAACTTTTGGAAGTGCTGGTTGGCTCAATCCCAGTGATATTATGCCATGTGGTAGAAGAGCATaGTCCTGCATGGATGTTAAT | + |
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Preference number: 4 (lower is better) Translates to: KLTTFGSAGWLNPSDIMPCGRRA*SCMDVN Trigger: ATTAACATCCATGCAGGATCATGCTCTTCTACCACA...TGGCATAATATCACTGGGATTGAGCCAACCAGCACTTCCAAAAGTTGTCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | AAACTGACAACTTTTGGAAGTGCTGGTTGGCTCAATCCCAGTGATATTATGCCATTTGGAAGTGCTGGTTaGCTCAATCCCAGTGATATT | + |
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Preference number: 4 (lower is better) Translates to: KLTTFGSAGWLNPSDIMPFGSAG*LNPSDI Trigger: AATATCACTGGGATTGAGCCAACCAGCACTTCCAAA...TGGCATAATATCACTGGGATTGAGCCAACCAGCACTTCCAAAAGTTGTCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR CAA 72 bp | TTATCTACCTTCCAGTACTCTGAGAAATTTCCTTTGTaGTGTTCATCATCAGTTGGCCCGACCTCTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: LSTFQYSEKFPL*CSSSVGPTSFT Trigger: AGTGAAAGAGGTCGGGCCAACTGATGATGAACACAACAAAGGAAATTTCTCAGAGTACTGGAAGGTAGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR TCA 90 bp | CCAGTGATATTATGCCATTCTGTGTCAATGGCATACCTATGTGCCTTTATTTACAATGTCTGCACAGATTaGAATTCCCAAGATGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PVILCHSVSMAYLCAFIYNVCTD*NSQDAQ Trigger: CTGGGCATCTTGGGAATTTCAATCTGTGCAGACATT...GTAAATAAAGGCACATAGGTATGCCATTGACACAGAATGGCATAATATCACTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR GCA 90 bp | AAACTGACAACTTTTGGAAGTGCTGGTTGGCTCAATCCCAGTGATATTATGCCACTGTTCCCATTTATTTaGATTTCACTTGGCACCCAA | + |
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Preference number: 4 (lower is better) Translates to: KLTTFGSAGWLNPSDIMPLFPFI*ISLGTQ Trigger: TTGGGTGCCAAGTGAAATGCAAATAAATGGGAACAG...TGGCATAATATCACTGGGATTGAGCCAACCAGCACTTCCAAAAGTTGTCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR GCA 90 bp | AAACTGACAACTTTTGGAAGTGCTGGTTGGCTCAATCCCAGTGATATTATGCCAATCCCAGTGATATTATaGCATTCTGTGTCAATGGCA | + |
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Preference number: 4 (lower is better) Translates to: KLTTFGSAGWLNPSDIMPIPVIL*HSVSMA Trigger: TGCCATTGACACAGAATGGCATAATATCACTGGGAT...TGGCATAATATCACTGGGATTGAGCCAACCAGCACTTCCAAAAGTTGTCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | AGTGATATTATGCCATTCTGTGTCAATGGCATACCTATGTGCCTTTATTTACTTTGCAGAGTTTCTCAATaGGTGACCCAAGCAGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SDIMPFCVNGIPMCLYLLCRVSQ*VTQAGT Trigger: GGTTCCTGCTTGGGTCACCCATTGAGAAACTCTGCA...AAGTAAATAAAGGCACATAGGTATGCCATTGACACAGAATGGCATAATATCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR TCA 90 bp | AAACTGACAACTTTTGGAAGTGCTGGTTGGCTCAATCCCAGTGATATTATGCCATTCTATTCTAGATCCTaGGAGCATTTCTTAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KLTTFGSAGWLNPSDIMPFYSRS*EHFLVT Trigger: AGTCACTAAGAAATGCTCTCAGGATCTAGAATAGAA...TGGCATAATATCACTGGGATTGAGCCAACCAGCACTTCCAAAAGTTGTCAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR GCA 90 bp | AATCATCCTAAACATGAATGTCTGCACAGATTGAAATTCCCAAGATGCCCAGGAACAAAGGGATATGTTTaGAGAGTTTCTCAATGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NHPKHECLHRLKFPRCPGTKGYV*RVSQWV Trigger: CACCCATTGAGAAACTCTGCAAACATATCCCTTTGT...TCCTGGGCATCTTGGGAATTTCAATCTGTGCAGACATTCATGTTTAGGATGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CCA 90 bp | AGTGATATTATGCCATTCTGTGTCAATGGCATACCTATGTGCCTTTATTTACTTCCCAGGTGTATTTGCTaGAGAACATGTTGTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SDIMPFCVNGIPMCLYLLPRCIC*RTCCPE Trigger: CTCTGGACAACATGTTCTCCAGCAAATACACCTGGG...AAGTAAATAAAGGCACATAGGTATGCCATTGACACAGAATGGCATAATATCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR TCA 90 bp | CCAGTGATATTATGCCATTCTGTGTCAATGGCATACCTATGTGCCTTTATTTACAAAACCTCGTATCCATaGGATTGTATCCCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PVILCHSVSMAYLCAFIYKTSYP*DCIPKM Trigger: CATCTTTGGGATACAATCTCATGGATACGAGGTTTT...GTAAATAAAGGCACATAGGTATGCCATTGACACAGAATGGCATAATATCACTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR GCA 90 bp | TTTTCATTGGCATCCAGAAATCCTTTACTCCATCCTCTCTTTTCACTTGTCAGCAATGACAGTAATATCTaGAGTGGCATATGTTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSLASRNPLLHPLFSLVSNDSNI*SGICYP Trigger: TGGGTAACATATGCCACTGCAGATATTACTGTCATT...GCTGACAAGTGAAAAGAGAGGATGGAGTAAAGGATTTCTGGATGCCAATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| 3UTR CAA 72 bp | ACATATGAAAGTATACAAGAATCGAGTAGTTTTTCATaGGCATCCAGAAATCCTTTACTCCATCCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TYESIQESSSFS*ASRNPLLHPLF Trigger: AAAGAGAGGATGGAGTAAAGGATTTCTGGATGCCAATGAAAAACTACTCGATTCTTGTATACTTTCATATGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | ATGCCCAGGAGCCCAGCCTTTGCACAGCCTCCAGCACCGACATTATCTGGAAAATCCAGAGGGTTGTACTaGACCCAGGTGTATTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MPRSPAFAQPPAPTLSGKSRGLY*TQVYLL Trigger: CAGCAAATACACCTGGGTCAAGTACAACCCTCTGGA...TTTTCCAGATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGCTCCTGGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | ATGCCCAGGAGCCCAGCCTTTGCACAGCCTCCAGCACCGACATTATCTGGAAAACTCATAGATGTACCATaGGAGATTGTTCAGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MPRSPAFAQPPAPTLSGKLIDVP*EIVQRR Trigger: CCTCCTCTGAACAATCTCCAATGGTACATCTATGAG...TTTTCCAGATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGCTCCTGGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | TGTGTTCATCATCAGTTGGCCCGACCTCTTTCACTCTGGTTGCTCTGCCACATTAGAGACTCCAGAGGGTaGTACTTGACCCAGGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: CVHHQLARPLSLWLLCHIRDSRG*YLTQVY Trigger: ATACACCTGGGTCAAGTACAACCCTCTGGAGTCTCT...AATGTGGCAGAGCAACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | GATGAATCAGGGTTTTTACTCCCTGTCTGTAAGTCCGCTTGGCCTCCTCTTTCCAACCAATCCACGTCTTaGATCAGAGACTCCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DESGFLLPVCKSAWPPLSNQSTS*IRDSRG Trigger: CCCTCTGGAGTCTCTGATCAAAGACGTGGATTGGTT...GGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTAAAAACCCTGATTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | TGTGTTCATCATCAGTTGGCCCGACCTCTTTCACTCTGGTTGCTCTGCCACATTGAATGTCTGCACAGATaGAAATTCCCAAGATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CVHHQLARPLSLWLLCHIECLHR*KFPRCP Trigger: TGGGCATCTTGGGAATTTCAATCTGTGCAGACATTC...AATGTGGCAGAGCAACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS TCA 90 bp | TTCCCCCTTATACAAAGGGATATGTTTGCAGAGTTTCTCAATGGGTaGCCCAAGCAGGAACCAATCCACGTCTTTGATCAGAGACTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FPLIQRDMFAEFLNG*PKQEPIHVFDQRLQ Trigger: CTGGAGTCTCTGATCAAAGACGTGGATTGGTTCCTGCTTGGGTCACCCATTGAGAAACTCTGCAAACATATCCCTTTGTATAAGGGGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000328895.9 ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | TTGCATTTCACTTGGCACCCAACAGAGCACCTGGCACATAGTAGCTTTCAGAAATTGACCCAGGTGTATTaGCTGGAGAACATGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHFTWHPTEHLAHSSFQKLTQVY*LENMLS Trigger: GGACAACATGTTCTCCAGCAAATACACCTGGGTCAA...TTTCTGAAAGCTACTATGTGCCAGGTGCTCTGTTGGGTGCCAAGTGAAATGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | GATGAATCAGGGTTTTTACTCCCTGTCTGTAAGTCCGCTTGGCCTCCTCTTTCCGGCCCAGATGACTTTTaGCTACTTGAAATTCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: DESGFLLPVCKSAWPPLSGPDDF*LLEILT Trigger: TGTAAGAATTTCAAGTAGCAAAAAGTCATCTGGGCC...GGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTAAAAACCCTGATTCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | TGTGTTCATCATCAGTTGGCCCGACCTCTTTCACTCTGGTTGCTCTGCCACATTGAGAAATTTCCTTTGTaGTGTTCATCATCAGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CVHHQLARPLSLWLLCHIEKFPL*CSSSVG Trigger: GCCAACTGATGATGAACACAACAAAGGAAATTTCTC...AATGTGGCAGAGCAACCAGAGTGAAAGAGGTCGGGCCAACTGATGATGAACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS GCA 90 bp | TATGTGTGTTTTCAACCACTTCCCCCTTATACAAAGGGATATGTTTaGAGAGTTTCTCAATGGGTGACCCAAGCAGGAACCAATCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: YVCFQPLPPYTKGYV*RVSQWVTQAGTNPR Trigger: ACGTGGATTGGTTCCTGCTTGGGTCACCCATTGAGAAACTCTGCAAACATATCCCTTTGTATAAGGGGGAAGTGGTTGAAAACACACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328895.9 |
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| CDS-3UTR CAA 90 bp | TTTTTACTCCCTGTCTGTAAGTCCGCTTGGCCTCCTCTTTCCTATACCAATTCTCTCGTATCCATGAGATaGTATCCCAAAGATGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLLPVCKSAWPPLSYTNSLVSMR*YPKDGQ Trigger: CTGACCATCTTTGGGATACAATCTCATGGATACGAG...AGAATTGGTATAGGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | TTTTTACTCCCTGTCTGTAAGTCCGCTTGGCCTCCTCTTTCCTATACCAATTCTATGTACCATTGGAGATaGTTCAGAGGAGGGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLLPVCKSAWPPLSYTNSMYHWR*FRGGMF Trigger: GAACATCCCTCCTCTGAACAATCTCCAATGGTACAT...AGAATTGGTATAGGAAAGAGGAGGCCAAGCGGACTTACAGACAGGGAGTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | TCACTTGGCACCCAACAGAGCACCTGGCACATAGTAGCTTTCAGAAAATATTTGTTATTTGCATTTCACTaGGCACCCAACAGAGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLGTQQSTWHIVAFRKYLLFAFH*APNRAP Trigger: AGGTGCTCTGTTGGGTGCCAAGTGAAATGCAAATAA...CAAATATTTTCTGAAAGCTACTATGTGCCAGGTGCTCTGTTGGGTGCCAAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | TTGCATTTCACTTGGCACCCAACAGAGCACCTGGCACATAGTAGCTTTCAGAAAATCCTCTCTTTTCACTaGTCAGCTTCTTCACTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LHFTWHPTEHLAHSSFQKILSFH*SASSLD Trigger: GTCTAGTGAAGAAGCTGACAAGTGAAAAGAGAGGAT...TTTCTGAAAGCTACTATGTGCCAGGTGCTCTGTTGGGTGCCAAGTGAAATGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | AAACTGACAACTTTTGGAAGTGCTGGTTGGCTCAATCCCAGTGATATTATGCCAACATTGCCACCATTGTaGCTTGGGCTGATGATGTTA | + |
|
Preference number: 5 (lower is better) Translates to: KLTTFGSAGWLNPSDIMPTLPPL*LGLMML Trigger: TAACATCATCAGCCCAAGCAACAATGGTGGCAATGT...TGGCATAATATCACTGGGATTGAGCCAACCAGCACTTCCAAAAGTTGTCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | TCACTTGGCACCCAACAGAGCACCTGGCACATAGTAGCTTTCAGAAAATATTTGACTGTTCCCATTTATTaGCATTTCACTTGGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLGTQQSTWHIVAFRKYLTVPIY*HFTWHP Trigger: TGGGTGCCAAGTGAAATGCAAATAAATGGGAACAGT...CAAATATTTTCTGAAAGCTACTATGTGCCAGGTGCTCTGTTGGGTGCCAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS-3UTR CAA 90 bp | TTTTCACTTGTCAGCTTCTTCACTAGACTATGTGTTCCCTGGAGACGTTTAATTTGTGTTCATCATCAGTaGGCCCGACCTCTTTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: FSLVSFFTRLCVPWRRLICVHHQ*ARPLSL Trigger: GAGTGAAAGAGGTCGGGCCAACTGATGATGAACACA...AATTAAACGTCTCCAGGGAACACATAGTCTAGTGAAGAAGCTGACAAGTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481498.1 |
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| CDS CAA 72 bp | TCAATGGGTGACCCAAGCAGGAACCAATCCACGTCTTaGATCAGAGACTCCAGAGGGTTGTACTTGACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SMGDPSRNQSTS*IRDSRGLYLTQ Trigger: CTGGGTCAAGTACAACCCTCTGGAGTCTCTGATCAAAGACGTGGATTGGTTCCTGCTTGGGTCACCCATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328895.9 ENST00000481498.1 |
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| CDS CAA 90 bp | TGTCTGCACAGATTGAAATTCCCAAGATGCCCAGGAGCCCAGCCTTaGCACAGCCTCCAGCACCGACATTATGTGTGTTTTCAACCACTT | + |
|
Preference number: 6 (lower is better) Translates to: CLHRLKFPRCPGAQP*HSLQHRHYVCFQPL Trigger: AAGTGGTTGAAAACACACATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGCTCCTGGGCATCTTGGGAATTTCAATCTGTGCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000328895.9 |
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| CDS CAA 72 bp | AGATTGAAATTCCCAAGATGCCCAGGAGCCCAGCCTTaGCACAGCCTCCAGCACCGACATTATGTGTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLKFPRCPGAQP*HSLQHRHYVCF Trigger: AAAACACACATAATGTCGGTGCTGGAGGCTGTGCAAAGGCTGGGCTCCTGGGCATCTTGGGAATTTCAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000328895.9 |
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| CDS CAA 90 bp | AGGAACCAATCCACGTCTTTGATCAGAGACTCCAGAGGGTTGTACTaGACCCAGGTGTATTTGCTGGAGAACATGTTGTCCAGAGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RNQSTSLIRDSRGLY*TQVYLLENMLSRAC Trigger: ACAGGCTCTGGACAACATGTTCTCCAGCAAATACACCTGGGTCAAGTACAACCCTCTGGAGTCTCTGATCAAAGACGTGGATTGGTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328895.9 ENST00000481498.1 |
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| CDS CAA 90 bp | CCAAGCAGGAACCAATCCACGTCTTTGATCAGAGACTCCAGAGGGTaGTACTTGACCCAGGTGTATTTGCTGGAGAACATGTTGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PSRNQSTSLIRDSRG*YLTQVYLLENMLSR Trigger: TCTGGACAACATGTTCTCCAGCAAATACACCTGGGTCAAGTACAACCCTCTGGAGTCTCTGATCAAAGACGTGGATTGGTTCCTGCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328895.9 ENST00000481498.1 |
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| CDS CAA 90 bp | CAGAGTTTCTCAATGGGTGACCCAAGCAGGAACCAATCCACGTCTTaGATCAGAGACTCCAGAGGGTTGTACTTGACCCAGGTGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: QSFSMGDPSRNQSTS*IRDSRGLYLTQVYL Trigger: CAAATACACCTGGGTCAAGTACAACCCTCTGGAGTCTCTGATCAAAGACGTGGATTGGTTCCTGCTTGGGTCACCCATTGAGAAACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328895.9 ENST00000481498.1 |
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| CDS CAA 72 bp | AGAGACTCCAGAGGGTTGTACTTGACCCAGGTGTATTaGCTGGAGAACATGTTGTCCAGAGCCTGTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RDSRGLYLTQVY*LENMLSRACFS Trigger: TGAGAAACAGGCTCTGGACAACATGTTCTCCAGCAAATACACCTGGGTCAAGTACAACCCTCTGGAGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328895.9 ENST00000481498.1 |
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| CDS CAA 72 bp | TCCACGTCTTTGATCAGAGACTCCAGAGGGTTGTACTaGACCCAGGTGTATTTGCTGGAGAACATGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: STSLIRDSRGLY*TQVYLLENMLS Trigger: GGACAACATGTTCTCCAGCAAATACACCTGGGTCAAGTACAACCCTCTGGAGTCTCTGATCAAAGACGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328895.9 ENST00000481498.1 |
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| CDS CAA 72 bp | AACCAATCCACGTCTTTGATCAGAGACTCCAGAGGGTaGTACTTGACCCAGGTGTATTTGCTGGAGAACATG | + |
|
Preference number: 6 (lower is better) Translates to: NQSTSLIRDSRG*YLTQVYLLENM Trigger: CATGTTCTCCAGCAAATACACCTGGGTCAAGTACAACCCTCTGGAGTCTCTGATCAAAGACGTGGATTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328895.9 ENST00000481498.1 |
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| CDS GCA 72 bp | TTTCAACCACTTCCCCCTTATACAAAGGGATATGTTTaGAGAGTTTCTCAATGGGTGACCCAAGCAGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: FQPLPPYTKGYV*RVSQWVTQAGT Trigger: GGTTCCTGCTTGGGTCACCCATTGAGAAACTCTGCAAACATATCCCTTTGTATAAGGGGGAAGTGGTTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000328895.9 ENST00000481498.1 |
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| CDS CAA 90 bp | TTATGTGTGTTTTCAACCACTTCCCCCTTATACAAAGGGATATGTTaGCAGAGTTTCTCAATGGGTGACCCAAGCAGGAACCAATCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LCVFSTTSPLYKGIC*QSFSMGDPSRNQST Trigger: CGTGGATTGGTTCCTGCTTGGGTCACCCATTGAGAAACTCTGCAAACATATCCCTTTGTATAAGGGGGAAGTGGTTGAAAACACACATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000328895.9 |
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| CDS TCA 72 bp | ATACAAAGGGATATGTTTGCAGAGTTTCTCAATGGGTaGCCCAAGCAGGAACCAATCCACGTCTTTGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: IQRDMFAEFLNG*PKQEPIHVFDQ Trigger: CTGATCAAAGACGTGGATTGGTTCCTGCTTGGGTCACCCATTGAGAAACTCTGCAAACATATCCCTTTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000328895.9 ENST00000481498.1 |
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| CDS CAA 72 bp | TGGGCTGATGATGTTAAAAACCTCGTATCCATGAGATaGTATCCCAAAGATGGTCAGCACCACCAGAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: WADDVKNLVSMR*YPKDGQHHQKC Trigger: GCATTTCTGGTGGTGCTGACCATCTTTGGGATACAATCTCATGGATACGAGGTTTTTAACATCATCAGCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000328895.9 ENST00000481498.1 |
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| CDS TCA 72 bp | GCCATGTTTATAGTCAAAAATTGTGGTAGAAGAGCATaGTCCTGCATGGATGTTAATGATGGCGGTATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: AMFIVKNCGRRA*SCMDVNDGGIF Trigger: AAAAATACCGCCATCATTAACATCCATGCAGGATCATGCTCTTCTACCACAATTTTTGACTATAAACATGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000328895.9 ENST00000481498.1 |
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